International Nuclear Information System (INIS)
Andrieux, Chantal
1976-03-01
The neutronic evolution of the reacteur Sena during the first and second cycles is presented. The experimental power distributions, obtained from the in-core instrumentation evaluation code CIRCE are compared with the theoretical powers calculated with the two-dimensional diffusion-evolution code EVOE. The CIRCE code allows: the study of the evolution of the principal parameters of the core, the comparison of the results of measured and theoretical estimates. Therefore this study has a great interest for the knowledge of the neutronic evolution of the core, as well as the validation of the refinement of theoretical estimation methods. The core calculation methods and requisite data for the evaluation of the measurements are presented after a brief description of the SENA core and its inner instrumentation. The principle of the in-core instrumentation evaluation code CIRCE, and calculation of the experimental power distributions and nuclear core parameters are then exposed. The results of the evaluation are discussed, with a comparison of the theoretical and experimental results. Taking account of the approximations used, these results, as far as the first and second cycles at SENA are concerned, are satisfactory, the deviations between theoretical and experimental power distributions being lower than 3% at the middle of the reactor and 9% at the periphery [fr
MOCCA Code for Star Cluster Simulation: Comparison with Optical Observations using COCOA
Askar, Abbas; Giersz, Mirek; Pych, Wojciech; Olech, Arkadiusz; Hypki, Arkadiusz
2014-01-01
We introduce and present preliminary results from COCOA (Cluster simulatiOn Comparison with ObservAtions) code for a star cluster after 12 Gyrs of evolution simulated using the MOCCA code. The COCOA code is being developed to quickly compare results of numerical simulations of star clusters with observational data. We use COCOA to obtain parameters of the projected cluster model. For comparison, a FITS file of the projected cluster was provided to observers so that they could use their observ...
MOCCA code for star cluster simulation: comparison with optical observations using COCOA
Askar, Abbas; Giersz, Mirek; Pych, Wojciech; Olech, Arkadiusz; Hypki, Arkadiusz
2016-02-01
We introduce and present preliminary results from COCOA (Cluster simulatiOn Comparison with ObservAtions) code for a star cluster after 12 Gyr of evolution simulated using the MOCCA code. The COCOA code is being developed to quickly compare results of numerical simulations of star clusters with observational data. We use COCOA to obtain parameters of the projected cluster model. For comparison, a FITS file of the projected cluster was provided to observers so that they could use their observational methods and techniques to obtain cluster parameters. The results show that the similarity of cluster parameters obtained through numerical simulations and observations depends significantly on the quality of observational data and photometric accuracy.
The Evolution of Bony Vertebrate Enhancers at Odds with Their Coding Sequence Landscape.
Yousaf, Aisha; Sohail Raza, Muhammad; Ali Abbasi, Amir
2015-08-06
Enhancers lie at the heart of transcriptional and developmental gene regulation. Therefore, changes in enhancer sequences usually disrupt the target gene expression and result in disease phenotypes. Despite the well-established role of enhancers in development and disease, evolutionary sequence studies are lacking. The current study attempts to unravel the puzzle of bony vertebrates' conserved noncoding elements (CNE) enhancer evolution. Bayesian phylogenetics of enhancer sequences spotlights promising interordinal relationships among placental mammals, proposing a closer relationship between humans and laurasiatherians while placing rodents at the basal position. Clock-based estimates of enhancer evolution provided a dynamic picture of interspecific rate changes across the bony vertebrate lineage. Moreover, coelacanth in the study augmented our appreciation of the vertebrate cis-regulatory evolution during water-land transition. Intriguingly, we observed a pronounced upsurge in enhancer evolution in land-dwelling vertebrates. These novel findings triggered us to further investigate the evolutionary trend of coding as well as CNE nonenhancer repertoires, to highlight the relative evolutionary dynamics of diverse genomic landscapes. Surprisingly, the evolutionary rates of enhancer sequences were clearly at odds with those of the coding and the CNE nonenhancer sequences during vertebrate adaptation to land, with land vertebrates exhibiting significantly reduced rates of coding sequence evolution in comparison to their fast evolving regulatory landscape. The observed variation in tetrapod cis-regulatory elements caused the fine-tuning of associated gene regulatory networks. Therefore, the increased evolutionary rate of tetrapods' enhancer sequences might be responsible for the variation in developmental regulatory circuits during the process of vertebrate adaptation to land. © The Author(s) 2015. Published by Oxford University Press on behalf of the Society for
International Nuclear Information System (INIS)
Mur, J.; Larrauri, D.
1998-07-01
Computer simulation of flow in configurations close to pressurized water reactor (PWR) geometry is of great interest for Electricite de France (EDF). Although simulation of the flow through a whole PWR core with an all purpose CFD-code is not yet achievable, such a tool cna be quite useful to perform numerical experiments in order to try and improve the modeling introduced in computer codes devoted to reactor core thermal-hydraulic analysis. Further to simulation in small bare rod bundle configurations, the present study is focused on the simulation, with CFD-code ESTET and PWR core code THYC, of the flow in the experimental configuration VATICAN-1. ESTET simulation results are compared on the one hand to local velocity and concentration measurements, on the other hand with subchannel averaged values calculated by THYC. As far as the comparison with measurements is concerned, ESTET results are quite satisfactory relatively to available experimental data and their uncertainties. The effect of spacer grids and the prediction of the evolution of an unbalanced velocity profile seem to be correctly treated. As far as the comparison with THYC subchannel averaged values is concerned, the difficulty of a direct comparison between subchannel averaged and local values is pointed out. ESTET calculated local values are close to experimental local values. ESTET subchannel averaged values are also close to THYC calculation results. Thus, THYC results are satisfactory whereas their direct comparison to local measurements could show some disagreement. (author)
The DarkStars code: a publicly available dark stellar evolution package
Scott, Pat; Fairbairn, Malcolm
2009-01-01
We announce the public release of the 'dark' stellar evolution code DarkStars. The code simultaneously solves the equations of WIMP capture and annihilation in a star with those of stellar evolution assuming approximate hydrostatic equilibrium. DarkStars includes the most extensive WIMP microphysics of any dark evolution code to date. The code employs detailed treatments of the capture process from a range of WIMP velocity distributions, as well as composite WIMP distribution and conductive energy transport schemes based on the WIMP mean-free path in the star. We give a brief description of the input physics and practical usage of the code, as well as examples of its application to dark stars at the Galactic centre.
Light-water reactor safety analysis codes
International Nuclear Information System (INIS)
Jackson, J.F.; Ransom, V.H.; Ybarrondo, L.J.; Liles, D.R.
1980-01-01
A brief review of the evolution of light-water reactor safety analysis codes is presented. Included is a summary comparison of the technical capabilities of major system codes. Three recent codes are described in more detail to serve as examples of currently used techniques. Example comparisons between calculated results using these codes and experimental data are given. Finally, a brief evaluation of current code capability and future development trends is presented
Numerical Tokamak Project code comparison
International Nuclear Information System (INIS)
Waltz, R.E.; Cohen, B.I.; Beer, M.A.
1994-01-01
The Numerical Tokamak Project undertook a code comparison using a set of TFTR tokamak parameters. Local radial annulus codes of both gyrokinetic and gyrofluid types were compared for both slab and toroidal case limits assuming ion temperature gradient mode turbulence in a pure plasma with adiabatic electrons. The heat diffusivities were found to be in good internal agreement within ± 50% of the group average over five codes
Lasbleis, M.; Day, E. A.; Waszek, L.
2017-12-01
The complex nature of inner core structure has been well-established from seismic studies, with heterogeneities at various length scales, both radially and laterally. Despite this, no geodynamic model has successfully explained all of the observed seismic features. To facilitate comparisons between seismic observations and geodynamic models of inner core growth we have developed a new, open access Python tool - GrowYourIC - that allows users to compare models of inner core structure. The code allows users to simulate different evolution models of the inner core, with user-defined rates of inner core growth, translation and rotation. Once the user has "grown" an inner core with their preferred parameters they can then explore the effect of "their" inner core's evolution on the relative age and growth rate in different regions of the inner core. The code will convert these parameters into seismic properties using either built-in mineral physics models, or user-supplied ones that calculate these seismic properties with users' own preferred mineralogical models. The 3D model of isotropic inner core properties can then be used to calculate the predicted seismic travel time anomalies for a random, or user-specified, set of seismic ray paths through the inner core. A real dataset of inner core body-wave differential travel times is included for the purpose of comparing user-generated models of inner core growth to actual observed travel time anomalies in the top 100km of the inner core. Here, we explore some of the possibilities of our code. We investigate the effect of the limited illumination of the inner core by seismic waves on the robustness of kinematic model interpretation. We test the impact on seismic differential travel time observations of several kinematic models of inner core growth: fast lateral translation; slow differential growth; and inner core super-rotation. We find that a model of inner core evolution incorporating both differential growth and slow
DARWIN. An evolution code system for a large range of applications
International Nuclear Information System (INIS)
Tsilanizara, A.; Diop, C.M.; Nimal, B.
2000-01-01
The aim of this article is to present the main capabilities of an evolution code system, DARWIN, developed at CEA (France). It is devoted to radioactivity studies in various application fields such as nuclear fuel cycle, dismantling, thermonuclear fusion, accelerator driven system, medecine etc. All types of nuclides are dealt with: actinides, fission products, activation products, spallation products. Physical quantities calculated by the code are isotope concentration, isotope mass, activity, radiotoxicity, gamma spectra, beta spectra, alpha spectra, neutron production by spontaneous fission and (α, n) reaction, residual heating, for any cooling times until geological times. Both analytical and numerical schemes are developed in the PEPIN2 depletion module of DARWIN to solve the generalized coupled differential depletion equations. The depletion module PEPIN2 is automatically linked to international evaluations (JEF2, ENDF/B6, EAF97...) both for decay data and cross-sections, and to some transport codes such as TRIPOLI, APOLLO2 and ERANOS. These transport codes provide neutronic data as self-shielded cross-sections and neutron fluxes. DARWIN includes a generator of radioisotope chain built automatically from decay modes and nuclear reaction types specified in the evaluation libraries. A 'search engine' allows to determine all formation ways of a considered isotope. Several examples are given for illustrating capabilities of DARWIN in different field applications. Some comparisons with other codes such as ORIGEN, FISPIN and FISPACT are also presented. (author)
Comparison of sodium aerosol codes
International Nuclear Information System (INIS)
Dunbar, I.H.; Fermandjian, J.; Bunz, H.; L'homme, A.; Lhiaubet, G.; Himeno, Y.; Kirby, C.R.; Mitsutsuka, N.
1984-01-01
Although hypothetical fast reactor accidents leading to severe core damage are very low probability events, their consequences are to be assessed. During such accidents, one can envisage the ejection of sodium, mixed with fuel and fission products, from the primary circuit into the secondary containment. Aerosols can be formed either by mechanical dispersion of the molten material or as a result of combustion of the sodium in the mixture. Therefore considerable effort has been devoted to study the different sodium aerosol phenomena. To ensure that the problems of describing the physical behaviour of sodium aerosols were adequately understood, a comparison of the codes being developed to describe their behaviour was undertaken. The comparison consists of two parts. The first is a comparative study of the computer codes used to predict aerosol behaviour during a hypothetical accident. It is a critical review of documentation available. The second part is an exercise in which code users have run their own codes with a pre-arranged input. For the critical comparative review of the computer models, documentation has been made available on the following codes: AEROSIM (UK), MAEROS (USA), HAARM-3 (USA), AEROSOLS/A2 (France), AEROSOLS/B1 (France), and PARDISEKO-IIIb (FRG)
A CFD code comparison of wind turbine wakes
DEFF Research Database (Denmark)
Laan, van der, Paul Maarten; Storey, R. C.; Sørensen, Niels N.
2014-01-01
A comparison is made between the EllipSys3D and SnS CFD codes. Both codes are used to perform Large-Eddy Simulations (LES) of single wind turbine wakes, using the actuator disk method. The comparison shows that both LES models predict similar velocity deficits and stream-wise Reynolds-stresses fo...
The evolution of the mitochondrial genetic code in arthropods revisited.
Abascal, Federico; Posada, David; Zardoya, Rafael
2012-04-01
A variant of the invertebrate mitochondrial genetic code was previously identified in arthropods (Abascal et al. 2006a, PLoS Biol 4:e127) in which, instead of translating the AGG codon as serine, as in other invertebrates, some arthropods translate AGG as lysine. Here, we revisit the evolution of the genetic code in arthropods taking into account that (1) the number of arthropod mitochondrial genomes sequenced has triplicated since the original findings were published; (2) the phylogeny of arthropods has been recently resolved with confidence for many groups; and (3) sophisticated probabilistic methods can be applied to analyze the evolution of the genetic code in arthropod mitochondria. According to our analyses, evolutionary shifts in the genetic code have been more common than previously inferred, with many taxonomic groups displaying two alternative codes. Ancestral character-state reconstruction using probabilistic methods confirmed that the arthropod ancestor most likely translated AGG as lysine. Point mutations at tRNA-Lys and tRNA-Ser correlated with the meaning of the AGG codon. In addition, we identified three variables (GC content, number of AGG codons, and taxonomic information) that best explain the use of each of the two alternative genetic codes.
Koonin, Eugene V
2017-05-23
Nearly 50 years ago, Francis Crick propounded the frozen accident scenario for the evolution of the genetic code along with the hypothesis that the early translation system consisted primarily of RNA. Under the frozen accident perspective, the code is universal among modern life forms because any change in codon assignment would be highly deleterious. The frozen accident can be considered the default theory of code evolution because it does not imply any specific interactions between amino acids and the cognate codons or anticodons, or any particular properties of the code. The subsequent 49 years of code studies have elucidated notable features of the standard code, such as high robustness to errors, but failed to develop a compelling explanation for codon assignments. In particular, stereochemical affinity between amino acids and the cognate codons or anticodons does not seem to account for the origin and evolution of the code. Here, I expand Crick's hypothesis on RNA-only translation system by presenting evidence that this early translation already attained high fidelity that allowed protein evolution. I outline an experimentally testable scenario for the evolution of the code that combines a distinct version of the stereochemical hypothesis, in which amino acids are recognized via unique sites in the tertiary structure of proto-tRNAs, rather than by anticodons, expansion of the code via proto-tRNA duplication, and the frozen accident.
24 CFR 200.926a - Residential building code comparison items.
2010-04-01
... 24 Housing and Urban Development 2 2010-04-01 2010-04-01 false Residential building code comparison items. 200.926a Section 200.926a Housing and Urban Development Regulations Relating to Housing and... § 200.926a Residential building code comparison items. HUD will review each local and State code...
CoCoNuT: General relativistic hydrodynamics code with dynamical space-time evolution
Dimmelmeier, Harald; Novak, Jérôme; Cerdá-Durán, Pablo
2012-02-01
CoCoNuT is a general relativistic hydrodynamics code with dynamical space-time evolution. The main aim of this numerical code is the study of several astrophysical scenarios in which general relativity can play an important role, namely the collapse of rapidly rotating stellar cores and the evolution of isolated neutron stars. The code has two flavors: CoCoA, the axisymmetric (2D) magnetized version, and CoCoNuT, the 3D non-magnetized version.
A photon dominated region code comparison study
Roellig, M.; Abel, N. P.; Bell, T.; Bensch, F.; Black, J.; Ferland, G. J.; Jonkheid, B.; Kamp, I.; Kaufman, M. J.; Le Bourlot, J.; Le Petit, F.; Meijerink, R.; Morata, O.; Ossenkopf, Volker; Roueff, E.; Shaw, G.; Spaans, M.; Sternberg, A.; Stutzki, J.; Thi, W.-F.; van Dishoeck, E. F.; van Hoof, P. A. M.; Viti, S.; Wolfire, M. G.
Aims. We present a comparison between independent computer codes, modeling the physics and chemistry of interstellar photon dominated regions (PDRs). Our goal was to understand the mutual differences in the PDR codes and their effects on the physical and chemical structure of the model clouds, and
MONTE CARLO SIMULATIONS OF GLOBULAR CLUSTER EVOLUTION. V. BINARY STELLAR EVOLUTION
International Nuclear Information System (INIS)
Chatterjee, Sourav; Umbreit, Stefan; Rasio, Frederic A.; Fregeau, John M.
2010-01-01
We study the dynamical evolution of globular clusters containing primordial binaries, including full single and binary stellar evolution using our Monte Carlo cluster evolution code updated with an adaptation of the single and binary stellar evolution codes SSE and BSE from Hurley et al. We describe the modifications that we have made to the code. We present several test calculations and comparisons with existing studies to illustrate the validity of the code. We show that our code finds very good agreement with direct N-body simulations including primordial binaries and stellar evolution. We find significant differences in the evolution of the global properties of the simulated clusters using stellar evolution compared with simulations without any stellar evolution. In particular, we find that the mass loss from the stellar evolution acts as a significant energy production channel simply by reducing the total gravitational binding energy and can significantly prolong the initial core contraction phase before reaching the binary-burning quasi-steady state of the cluster evolution. We simulate a large grid of models varying the initial cluster mass, binary fraction, and concentration parameter, and we compare properties of the simulated clusters with those of the observed Galactic globular clusters (GGCs). We find that simply including stellar evolution in our simulations and assuming the typical initial cluster half-mass radius is approximately a few pc independent of mass, our simulated cluster properties agree well with the observed GGC properties such as the core radius and the ratio of the core radius to the half-mass radius. We explore in some detail qualitatively different clusters in different phases of their evolution and construct synthetic Hertzsprung-Russell diagrams for these clusters.
Comparison of beam deposition for three neutral beam injection codes
International Nuclear Information System (INIS)
Wieland, R.M.; Houlberg, W.A.; Mense, A.T.
1979-03-01
The three neutral beam injection codes BEAM (Houlberg, ORNL), HOFR (Howe, ORNL), and FREYA (Post, PPPL) are compared with respect to the calculation of the fast ion deposition profile H(r). Only plasmas of circular cross section are considered, with injection confined to the mid-plane of the torus. The approximations inherent in each code are pointed out, and a series of comparisons varying several parameters (beam energy and radius, machine size, and injection angle) shows excellent agreement among all the codes. A cost comparison (execution time and memory requirements) is made which points out the relative merits of each code within the context of incorporation into a plasma transport simulation code
Phenotypic Graphs and Evolution Unfold the Standard Genetic Code as the Optimal
Zamudio, Gabriel S.; José, Marco V.
2018-03-01
In this work, we explicitly consider the evolution of the Standard Genetic Code (SGC) by assuming two evolutionary stages, to wit, the primeval RNY code and two intermediate codes in between. We used network theory and graph theory to measure the connectivity of each phenotypic graph. The connectivity values are compared to the values of the codes under different randomization scenarios. An error-correcting optimal code is one in which the algebraic connectivity is minimized. We show that the SGC is optimal in regard to its robustness and error-tolerance when compared to all random codes under different assumptions.
Review and comparison of WWER and LWR Codes and Standards
International Nuclear Information System (INIS)
Buckthorpe, D.; Tashkinov, A.; Brynda, J.; Davies, L.M.; Cueto-Felgeueroso, C.; Detroux, P.; Bieniussa, K.; Guinovart, J.
2003-01-01
The results of work on a collaborative project on comparison of Codes and Standards used for safety related components of the WWER and LWR type reactors is presented. This work was performed on behalf of the European Commission, Working Group Codes and Standards and considers areas such as rules, criteria and provisions, failure mechanisms , derivation and understanding behind the fatigue curves, piping, materials and aging, manufacturing and ISI. WWERs are essentially designed and constructed using the Russian PNAE Code together with special provisions in a few countries (e.g. Czech Republic) from national standards. The LWR Codes have a strong dependence on the ASME Code. Also within Western Europe other codes are used including RCC-M, KTA and British Standards. A comparison of procedures used in all these codes and standards have been made to investigate the potential for equivalencies between the codes and any grounds for future cooperation between eastern and western experts in this field. (author)
Code comparison results for the loft LP-FP-2 experiment
International Nuclear Information System (INIS)
Merilo, M.; Mecham, D.C.
1991-01-01
Computer code calculations are compared with thermal hydraulic and fission product release, transport, and deposition data obtained from the OECD-LOFT LP-FP-2 experiment. Except for the MAAP code, which is a fully integrated severe accident code, the thermalhydraulic and fission product behavior were calculated with different codes. Six organizations participated in the thermal hydraulic portion of the code comparison exercise. These calculations were performed with RELAP 5, SCDAP/RELAP 5, and MAAP. The comparisons show generally well developed capabilities to determine the thermal-hydraulic conditions during the early stages of a severe core damage accident. Four participants submitted detailed fission product behavior calculations. Except for MAAP, as stated previously, the fission product inventory, core damage, fission product release, transport and deposition were calculated independently with different codes. Much larger differences than observed for the thermalhydraulic comparison were evident. The fission product inventory calculations were generally in good agreement with each other. Large differences were observed for release fractions and amounts of deposition. Net release calculations from the primary system were generally accurate within a factor of two or three for the more important fission products
Pretest aerosol code comparisons for LWR aerosol containment tests LA1 and LA2
International Nuclear Information System (INIS)
Wright, A.L.; Wilson, J.H.; Arwood, P.C.
1986-01-01
The Light-Water-Reactor (LWR) Aerosol Containment Experiments (LACE) are being performed in Richland, Washington, at the Hanford Engineering Development Laboratory (HEDL) under the leadership of an international project board and the Electric Power Research Institute. These tests have two objectives: (1) to investigate, at large scale, the inherent aerosol retention behavior in LWR containments under simulated severe accident conditions, and (2) to provide an experimental data base for validating aerosol behavior and thermal-hydraulic computer codes. Aerosol computer-code comparison activities are being coordinated at the Oak Ridge National Laboratory. For each of the six LACE tests, ''pretest'' calculations (for code-to-code comparisons) and ''posttest'' calculations (for code-to-test data comparisons) are being performed. The overall goals of the comparison effort are (1) to provide code users with experience in applying their codes to LWR accident-sequence conditions and (2) to evaluate and improve the code models
The Evolution of a Coding Schema in a Paced Program of Research
Winters, Charlene A.; Cudney, Shirley; Sullivan, Therese
2010-01-01
A major task involved in the management, analysis, and integration of qualitative data is the development of a coding schema to facilitate the analytic process. Described in this paper is the evolution of a coding schema that was used in the analysis of qualitative data generated from online forums of middle-aged women with chronic conditions who…
Computing element evolution towards Exascale and its impact on legacy simulation codes
International Nuclear Information System (INIS)
Colin de Verdiere, Guillaume J.L.
2015-01-01
In the light of the current race towards the Exascale, this article highlights the main features of the forthcoming computing elements that will be at the core of next generations of supercomputers. The market analysis, underlying this work, shows that computers are facing a major evolution in terms of architecture. As a consequence, it is important to understand the impacts of those evolutions on legacy codes or programming methods. The problems of dissipated power and memory access are discussed and will lead to a vision of what should be an exascale system. To survive, programming languages had to respond to the hardware evolutions either by evolving or with the creation of new ones. From the previous elements, we elaborate why vectorization, multithreading, data locality awareness and hybrid programming will be the key to reach the exascale, implying that it is time to start rewriting codes. (orig.)
Computing element evolution towards Exascale and its impact on legacy simulation codes
Colin de Verdière, Guillaume J. L.
2015-12-01
In the light of the current race towards the Exascale, this article highlights the main features of the forthcoming computing elements that will be at the core of next generations of supercomputers. The market analysis, underlying this work, shows that computers are facing a major evolution in terms of architecture. As a consequence, it is important to understand the impacts of those evolutions on legacy codes or programming methods. The problems of dissipated power and memory access are discussed and will lead to a vision of what should be an exascale system. To survive, programming languages had to respond to the hardware evolutions either by evolving or with the creation of new ones. From the previous elements, we elaborate why vectorization, multithreading, data locality awareness and hybrid programming will be the key to reach the exascale, implying that it is time to start rewriting codes.
Comparison of neutron spectrum unfolding codes
International Nuclear Information System (INIS)
Zijp, W.
1979-02-01
This final report contains a set of four ECN-reports. The first is dealing with the comparison of the neutron spectrum unfolding codes CRYSTAL BALL, RFSP-JUL, SAND II and STAY'SL. The other three present the results of calculations about the influence of statistical weights in CRYSTAL BALL, SAND II and RFSP-JUL
Comparison of computer code calculations with FEBA test data
International Nuclear Information System (INIS)
Zhu, Y.M.
1988-06-01
The FEBA forced feed reflood experiments included base line tests with unblocked geometry. The experiments consisted of separate effect tests on a full-length 5x5 rod bundle. Experimental cladding temperatures and heat transfer coefficients of FEBA test No. 216 are compared with the analytical data postcalculated utilizing the SSYST-3 computer code. The comparison indicates a satisfactory matching of the peak cladding temperatures, quench times and heat transfer coefficients for nearly all axial positions. This agreement was made possible by the use of an artificially adjusted value of the empirical code input parameter in the heat transfer for the dispersed flow regime. A limited comparison of test data and calculations using the RELAP4/MOD6 transient analysis code are also included. In this case the input data for the water entrainment fraction and the liquid weighting factor in the heat transfer for the dispersed flow regime were adjusted to match the experimental data. On the other hand, no fitting of the input parameters was made for the COBRA-TF calculations which are included in the data comparison. (orig.) [de
THE EXPERIENCE OF COMPARISON OF STATIC SECURITY CODE ANALYZERS
Directory of Open Access Journals (Sweden)
Alexey Markov
2015-09-01
Full Text Available This work presents a methodological approach to comparison of static security code analyzers. It substantiates the comparison of the static analyzers as to efficiency and functionality indicators, which are stipulated in the international regulatory documents. The test data for assessment of static analyzers efficiency is represented by synthetic sets of open-source software, which contain vulnerabilities. We substantiated certain criteria for quality assessment of the static security code analyzers subject to standards NIST SP 500-268 and SATEC. We carried out experiments that allowed us to assess a number of the Russian proprietary software tools and open-source tools. We came to the conclusion that it is of paramount importance to develop Russian regulatory framework for testing software security (firstly, for controlling undocumented features and evaluating the quality of static security code analyzers.
Comparison of Bit Error Rate of Line Codes in NG-PON2
Directory of Open Access Journals (Sweden)
Tomas Horvath
2016-05-01
Full Text Available This article focuses on simulation and comparison of line codes NRZ (Non Return to Zero, RZ (Return to Zero and Miller’s code for NG-PON2 (Next-Generation Passive Optical Network Stage 2 using. Our article provides solutions with Q-factor, BER (Bit Error Rate, and bandwidth comparison. Line codes are the most important part of communication over the optical fibre. The main role of these codes is digital signal representation. NG-PON2 networks use optical fibres for communication that is the reason why OptSim v5.2 is used for simulation.
An explicit harmonic code for black-hole evolution using excision
International Nuclear Information System (INIS)
Szilagyi, Bela; Pollney, Denis; Rezzolla, Luciano; Thornburg, Jonathan; Winicour, Jeffrey
2007-01-01
We describe an explicit in time, finite-difference code designed to simulate black holes by using the excision method. The code is based upon the harmonic formulation of the Einstein equations and incorporates several features regarding the well-posedness and numerical stability of the initial-boundary problem for the quasilinear wave equation. After a discussion of the equations solved and of the techniques employed, we present a series of testbeds carried out to validate the code. Such tests range from the evolution of isolated black holes to the head-on collision of two black holes and then to a binary black hole inspiral and merger. Besides assessing the accuracy of the code, the inspiral and merger test has revealed that the marginally trapped surfaces contained within the common apparent horizon of the merged black hole can touch and even intersect. This novel feature in the dynamics of the marginally trapped surfaces is unexpected but consistent with theorems on the properties of these surfaces
An explicit harmonic code for black-hole evolution using excision
Energy Technology Data Exchange (ETDEWEB)
Szilagyi, Bela [Max-Planck-Institut fuer Gravitationsphysik, Albert-Einstein-Institut, Golm (Germany); Pollney, Denis [Max-Planck-Institut fuer Gravitationsphysik, Albert-Einstein-Institut, Golm (Germany); Rezzolla, Luciano [Max-Planck-Institut fuer Gravitationsphysik, Albert-Einstein-Institut, Golm (Germany); Thornburg, Jonathan [Max-Planck-Institut fuer Gravitationsphysik, Albert-Einstein-Institut, Golm (Germany); Winicour, Jeffrey [Max-Planck-Institut fuer Gravitationsphysik, Albert-Einstein-Institut, Golm (Germany)
2007-06-21
We describe an explicit in time, finite-difference code designed to simulate black holes by using the excision method. The code is based upon the harmonic formulation of the Einstein equations and incorporates several features regarding the well-posedness and numerical stability of the initial-boundary problem for the quasilinear wave equation. After a discussion of the equations solved and of the techniques employed, we present a series of testbeds carried out to validate the code. Such tests range from the evolution of isolated black holes to the head-on collision of two black holes and then to a binary black hole inspiral and merger. Besides assessing the accuracy of the code, the inspiral and merger test has revealed that the marginally trapped surfaces contained within the common apparent horizon of the merged black hole can touch and even intersect. This novel feature in the dynamics of the marginally trapped surfaces is unexpected but consistent with theorems on the properties of these surfaces.
COCOA Code for Creating Mock Observations of Star Cluster Models
Askar, Abbas; Giersz, Mirek; Pych, Wojciech; Dalessandro, Emanuele
2017-01-01
We introduce and present results from the COCOA (Cluster simulatiOn Comparison with ObservAtions) code that has been developed to create idealized mock photometric observations using results from numerical simulations of star cluster evolution. COCOA is able to present the output of realistic numerical simulations of star clusters carried out using Monte Carlo or \\textit{N}-body codes in a way that is useful for direct comparison with photometric observations. In this paper, we describe the C...
A comparison of LOCA analysis using SMOKIN and CERBERUS codes
Energy Technology Data Exchange (ETDEWEB)
Younis, M H [Atomic Energy of Canada Ltd., Mississauga, ON (Canada); Gaboury, G [Ontario Hydro, Toronto, ON (Canada)
1996-12-31
This paper presents the results of a comparison of the analyses of a postulated Loss of Coolant Accident (LOCA) in Pickering NGS A reactors using the two neutron kinetics codes SMOKIN and CERBERUS. Both codes have been used to simulate the space-time neutronic behaviour of CANDU-PHWR reactors. The main objective of the present study is to evaluate the accuracy with which SMOKIN can predict power transients compared to CERBERUS. The comparison shows that the two codes produce similar bulk power and reactivity transients. However, SMOKIN was found to overestimate the power transient (relative to CERBERUS) in some regions of the core, which is indicative of the spatial differences between the two codes. It was demonstrated that part of this overestimate is due to the use of reaction-rate averaged fuel properties in SMOKIN, compared to instantaneous fuel properties in CERBERUS. (author). 5 refs., 3 tabs., 6 figs.
Geochemical modelling of groundwater evolution using chemical equilibrium codes
International Nuclear Information System (INIS)
Pitkaenen, P.; Pirhonen, V.
1991-01-01
Geochemical equilibrium codes are a modern tool in studying interaction between groundwater and solid phases. The most common used programs and application subjects are shortly presented in this article. The main emphasis is laid on the approach method of using calculated results in evaluating groundwater evolution in hydrogeological system. At present in geochemical equilibrium modelling also kinetic as well as hydrologic constrains along a flow path are taken into consideration
Fast rate of evolution in alternatively spliced coding regions of mammalian genes
Directory of Open Access Journals (Sweden)
Nurtdinov Ramil N
2006-04-01
Full Text Available Abstract Background At least half of mammalian genes are alternatively spliced. Alternative isoforms are often genome-specific and it has been suggested that alternative splicing is one of the major mechanisms for generating protein diversity in the course of evolution. Another way of looking at alternative splicing is to consider sequence evolution of constitutive and alternative regions of protein-coding genes. Indeed, it turns out that constitutive and alternative regions evolve in different ways. Results A set of 3029 orthologous pairs of human and mouse alternatively spliced genes was considered. The rate of nonsynonymous substitutions (dN, the rate of synonymous substitutions (dS, and their ratio (ω = dN/dS appear to be significantly higher in alternatively spliced coding regions compared to constitutive regions. When N-terminal, internal and C-terminal alternatives are analysed separately, C-terminal alternatives appear to make the main contribution to the observed difference. The effects become even more pronounced in a subset of fast evolving genes. Conclusion These results provide evidence of weaker purifying selection and/or stronger positive selection in alternative regions and thus one more confirmation of accelerated evolution in alternative regions. This study corroborates the theory that alternative splicing serves as a testing ground for molecular evolution.
International Nuclear Information System (INIS)
Wang Rubin; Yu Wei
2005-01-01
In this paper, we investigate how the population of neuronal oscillators deals with information and the dynamic evolution of neural coding when the external stimulation acts on it. Numerically computing method is used to describe the evolution process of neural coding in three-dimensioned space. The numerical result proves that only the suitable stimulation can change the coupling structure and plasticity of neurons
The spotted gar genome illuminates vertebrate evolution and facilitates human-to-teleost comparisons
Braasch, Ingo; Gehrke, Andrew R.; Smith, Jeramiah J.; Kawasaki, Kazuhiko; Manousaki, Tereza; Pasquier, Jeremy; Amores, Angel; Desvignes, Thomas; Batzel, Peter; Catchen, Julian; Berlin, Aaron M.; Campbell, Michael S.; Barrell, Daniel; Martin, Kyle J.; Mulley, John F.; Ravi, Vydianathan; Lee, Alison P.; Nakamura, Tetsuya; Chalopin, Domitille; Fan, Shaohua; Wcisel, Dustin; Cañestro, Cristian; Sydes, Jason; Beaudry, Felix E. G.; Sun, Yi; Hertel, Jana; Beam, Michael J.; Fasold, Mario; Ishiyama, Mikio; Johnson, Jeremy; Kehr, Steffi; Lara, Marcia; Letaw, John H.; Litman, Gary W.; Litman, Ronda T.; Mikami, Masato; Ota, Tatsuya; Saha, Nil Ratan; Williams, Louise; Stadler, Peter F.; Wang, Han; Taylor, John S.; Fontenot, Quenton; Ferrara, Allyse; Searle, Stephen M. J.; Aken, Bronwen; Yandell, Mark; Schneider, Igor; Yoder, Jeffrey A.; Volff, Jean-Nicolas; Meyer, Axel; Amemiya, Chris T.; Venkatesh, Byrappa; Holland, Peter W. H.; Guiguen, Yann; Bobe, Julien; Shubin, Neil H.; Di Palma, Federica; Alföldi, Jessica; Lindblad-Toh, Kerstin; Postlethwait, John H.
2016-01-01
To connect human biology to fish biomedical models, we sequenced the genome of spotted gar (Lepisosteus oculatus), whose lineage diverged from teleosts before the teleost genome duplication (TGD). The slowly evolving gar genome conserved in content and size many entire chromosomes from bony vertebrate ancestors. Gar bridges teleosts to tetrapods by illuminating the evolution of immunity, mineralization, and development (e.g., Hox, ParaHox, and miRNA genes). Numerous conserved non-coding elements (CNEs, often cis-regulatory) undetectable in direct human-teleost comparisons become apparent using gar: functional studies uncovered conserved roles of such cryptic CNEs, facilitating annotation of sequences identified in human genome-wide association studies. Transcriptomic analyses revealed that the sum of expression domains and levels from duplicated teleost genes often approximate patterns and levels of gar genes, consistent with subfunctionalization. The gar genome provides a resource for understanding evolution after genome duplication, the origin of vertebrate genomes, and the function of human regulatory sequences. PMID:26950095
Drăghici, S.; Proştean, O.; Răduca, E.; Haţiegan, C.; Hălălae, I.; Pădureanu, I.; Nedeloni, M.; (Barboni Haţiegan, L.
2017-01-01
In this paper a method with which a set of characteristic functions are associated to a LDPC code is shown and also functions that represent the evolution density of messages that go along the edges of a Tanner graph. Graphic representations of the density evolution are shown respectively the study and simulation of likelihood threshold that render asymptotic boundaries between which there are decodable codes were made using MathCad V14 software.
Data evaluation and code comparison activities
International Nuclear Information System (INIS)
Itikawa, Yukikazu; Takagi, Hidekazu; Nakamura, Yoshiharu; Imai, Makoto; Sasaki, Akira
2013-01-01
In atomic and molecular data base, intolerable numerical differences beyond error margin are found among some papers resulted from measurements or calculations even for the same collision processes. These differences spoil the reliability of the data base. This report describes the data evaluation for atomic and molecular data promoted by IAEA cooperated with other institutes, which Japanese researchers collaborate with. The reaction cross sections calculated numerically are evaluated for the collisions between electrons and molecular ions of H 2 + and HeH + . The application of an electron swarm parameter was shown for the evaluation and determination of the collision cross sections between electrons and molecules. In order to complete higher precision of atomic codes and a collisional-radiative model, IAEA held the workshop for the code comparison of the nonlocal thermodynamic equilibrium. (Y. Kazumata)
Regulatory context and evolutions - Public Health Code
International Nuclear Information System (INIS)
Rodde, S.
2009-01-01
After having recalled that numerous laws, decrees and orders have been published between 2001 and 2007 due to the transposition of EURATOM directives defining standards for population and worker health protection against dangers resulting from ionizing radiations, the author reviews the regulatory evolutions which occurred in 2008 and 2009, and those currently in progress. They concern the protection of people exposed to radon, the field of radiotherapy, authorizations issued in application of the French public health code. Some decisions are about to be finalized. They concern the activities submitted to a declaration, the modalities of prolongation of the lifetime of sealed sources, a list of apparatus categories the handling of which requires an ability certificate
BER performance comparison of optical CDMA systems with/without turbo codes
Kulkarni, Muralidhar; Chauhan, Vijender S.; Dutta, Yashpal; Sinha, Ravindra K.
2002-08-01
In this paper, we have analyzed and simulated the BER performance of a turbo coded optical code-division multiple-access (TC-OCDMA) system. A performance comparison has been made between uncoded OCDMA and TC-OCDMA systems employing various OCDMA address codes (optical orthogonal codes (OOCs), Generalized Multiwavelength Prime codes (GMWPC's), and Generalized Multiwavelength Reed Solomon code (GMWRSC's)). The BER performance of TC-OCDMA systems has been analyzed and simulated by varying the code weight of address code employed by the system. From the simulation results, it is observed that lower weight address codes can be employed for TC-OCDMA systems that can have the equivalent BER performance of uncoded systems employing higher weight address codes for a fixed number of active users.
Comparison of elevated temperature design codes of ASME Subsection NH and RCC-MRx
Energy Technology Data Exchange (ETDEWEB)
Lee, Hyeong-Yeon, E-mail: hylee@kaeri.re.kr
2016-11-15
Highlights: • Comparison of elevated temperature design (ETD) codes was made. • Material properties and evaluation procedures were compared. • Two heat-resistant materials of Grade 91 steel and austenitic stainless steel 316 are the target materials in the present study. • Application of the ETD codes to Generation IV reactor components and a comparison of the conservatism was conducted. - Abstract: The elevated temperature design (ETD) codes are used for the design evaluation of Generation IV (Gen IV) reactor systems such as sodium-cooled fast reactor (SFR), lead-cooled fast reactor (LFR), and very high temperature reactor (VHTR). In the present study, ETD code comparisons were made in terms of the material properties and design evaluation procedures for the recent versions of the two major ETD codes, ASME Section III Subsection NH and RCC-MRx. Conservatism in the design evaluation procedures was quantified and compared based on the evaluation results for SFR components as per the two ETD codes. The target materials are austenitic stainless steel 316 and Mod.9Cr-1Mo steel, which are the major two materials in a Gen IV SFR. The differences in the design evaluation procedures as well as the material properties in the two ETD codes are highlighted.
WEC3: Wave Energy Converter Code Comparison Project: Preprint
Energy Technology Data Exchange (ETDEWEB)
Combourieu, Adrien; Lawson, Michael; Babarit, Aurelien; Ruehl, Kelley; Roy, Andre; Costello, Ronan; Laporte Weywada, Pauline; Bailey, Helen
2017-01-01
This paper describes the recently launched Wave Energy Converter Code Comparison (WEC3) project and present preliminary results from this effort. The objectives of WEC3 are to verify and validate numerical modelling tools that have been developed specifically to simulate wave energy conversion devices and to inform the upcoming IEA OES Annex VI Ocean Energy Modelling Verification and Validation project. WEC3 is divided into two phases. Phase 1 consists of a code-to-code verification and Phase II entails code-to-experiment validation. WEC3 focuses on mid-fidelity codes that simulate WECs using time-domain multibody dynamics methods to model device motions and hydrodynamic coefficients to model hydrodynamic forces. Consequently, high-fidelity numerical modelling tools, such as Navier-Stokes computational fluid dynamics simulation, and simple frequency domain modelling tools were not included in the WEC3 project.
International Nuclear Information System (INIS)
Clancy, B.E.; Cook, J.L.
1984-12-01
The zero-dimensional code SCORCH determines number density and temperature evolution in plasmas using concepts derived from the Hinton and Hazeltine transport theory. The code uses the previously reported ADL-1 data library
Comparison of ANL containment codes with SNR-300 simulation experiments
International Nuclear Information System (INIS)
Marchertas, A.H.; Wang, C.Y.; Fistedis, S.H.
1976-01-01
A comparison of REXCO and ICECO code predictions is made with data obtained from experiments of LMFBR excursion models. The comparisons are based on published results of tests conducted for the safety analysis of the SNR-300 fast breeder. The test configurations consist of a centrally located spherical source immersed in a pool of water which is encased in a cylindrical container. The cylinical walls of the container are prestressed by holddown bolts which span the two rigid ends. The space above the surface of the water within the container is occupied by air. Although certain aspects of the tests could not be simulated by the analytical models exactly, the comparison of results shows quite close agreement. The fact that the REXCO and ICECO codes involve different analytical formulations, their own close correspondence of results lends added credence to the value of analytical predictions
Code comparison for accelerator design and analysis
International Nuclear Information System (INIS)
Parsa, Z.
1988-01-01
We present a comparison between results obtained from standard accelerator physics codes used for the design and analysis of synchrotrons and storage rings, with programs SYNCH, MAD, HARMON, PATRICIA, PATPET, BETA, DIMAD, MARYLIE and RACE-TRACK. In our analysis we have considered 5 (various size) lattices with large and small angles including AGS Booster (10/degree/ bend), RHIC (2.24/degree/), SXLS, XLS (XUV ring with 45/degree/ bend) and X-RAY rings. The differences in the integration methods used and the treatment of the fringe fields in these codes could lead to different results. The inclusion of nonlinear (e.g., dipole) terms may be necessary in these calculations specially for a small ring. 12 refs., 6 figs., 10 tabs
A CFD code comparison of wind turbine wakes
International Nuclear Information System (INIS)
Van der Laan, M P; Sørensen, N N; Storey, R C; Cater, J E; Norris, S E
2014-01-01
A comparison is made between the EllipSys3D and SnS CFD codes. Both codes are used to perform Large-Eddy Simulations (LES) of single wind turbine wakes, using the actuator disk method. The comparison shows that both LES models predict similar velocity deficits and stream-wise Reynolds-stresses for four test cases. A grid resolution study, performed in EllipSys3D and SnS, shows that a minimal uniform cell spacing of 1/30 of the rotor diameter is necessary to resolve the wind turbine wake. In addition, the LES-predicted velocity deficits are also compared with Reynolds-Averaged Navier Stokes simulations using EllipSys3D for a test case that is based on field measurements. In these simulations, two eddy viscosity turbulence models are employed: the k-ε model and the k-ε-f p model. Where the k-ε model fails to predict the velocity deficit, the results of the k-ε-f P model show good agreement with both LES models and measurements
The Second Workshop on Lineshape Code Comparison: Isolated Lines
Directory of Open Access Journals (Sweden)
Spiros Alexiou
2014-05-01
Full Text Available In this work, we briefly summarize the theoretical aspects of isolated line broadening. We present and discuss test run comparisons from different participating lineshape codes for the 2s-2p transition for LiI, B III and NV.
The APS SASE FEL: modeling and code comparison
International Nuclear Information System (INIS)
Biedron, S. G.
1999-01-01
A self-amplified spontaneous emission (SASE) free-electron laser (FEL) is under construction at the Advanced Photon Source (APS). Five FEL simulation codes were used in the design phase: GENESIS, GINGER, MEDUSA, RON, and TDA3D. Initial comparisons between each of these independent formulations show good agreement for the parameters of the APS SASE FEL
Comparison of DT neutron production codes MCUNED, ENEA-JSI source subroutine and DDT
Energy Technology Data Exchange (ETDEWEB)
Čufar, Aljaž, E-mail: aljaz.cufar@ijs.si [Reactor Physics Department, Jožef Stefan Institute, Jamova cesta 39, SI-1000 Ljubljana (Slovenia); Lengar, Igor; Kodeli, Ivan [Reactor Physics Department, Jožef Stefan Institute, Jamova cesta 39, SI-1000 Ljubljana (Slovenia); Milocco, Alberto [Culham Centre for Fusion Energy, Culham Science Centre, Abingdon, OX14 3DB (United Kingdom); Sauvan, Patrick [Departamento de Ingeniería Energética, E.T.S. Ingenieros Industriales, UNED, C/Juan del Rosal 12, 28040 Madrid (Spain); Conroy, Sean [VR Association, Uppsala University, Department of Physics and Astronomy, PO Box 516, SE-75120 Uppsala (Sweden); Snoj, Luka [Reactor Physics Department, Jožef Stefan Institute, Jamova cesta 39, SI-1000 Ljubljana (Slovenia)
2016-11-01
Highlights: • Results of three codes capable of simulating the accelerator based DT neutron generators were compared on a simple model where only a thin target made of mixture of titanium and tritium is present. Two typical deuteron beam energies, 100 keV and 250 keV, were used in the comparison. • Comparisons of the angular dependence of the total neutron flux and spectrum as well as the neutron spectrum of all the neutrons emitted from the target show general agreement of the results but also some noticeable differences. • A comparison of figures of merit of the calculations using different codes showed that the computational time necessary to achieve the same statistical uncertainty can vary for more than 30× when different codes for the simulation of the DT neutron generator are used. - Abstract: As the DT fusion reaction produces neutrons with energies significantly higher than in fission reactors, special fusion-relevant benchmark experiments are often performed using DT neutron generators. However, commonly used Monte Carlo particle transport codes such as MCNP or TRIPOLI cannot be directly used to analyze these experiments since they do not have the capabilities to model the production of DT neutrons. Three of the available approaches to model the DT neutron generator source are the MCUNED code, the ENEA-JSI DT source subroutine and the DDT code. The MCUNED code is an extension of the well-established and validated MCNPX Monte Carlo code. The ENEA-JSI source subroutine was originally prepared for the modelling of the FNG experiments using different versions of the MCNP code (−4, −5, −X) and was later extended to allow the modelling of both DT and DD neutron sources. The DDT code prepares the DT source definition file (SDEF card in MCNP) which can then be used in different versions of the MCNP code. In the paper the methods for the simulation of the DT neutron production used in the codes are briefly described and compared for the case of a
Wind-induced transmission tower foundation loads. A field study-design code comparison
Energy Technology Data Exchange (ETDEWEB)
Savory, E. [Department of Mechanical and Materials Engineering, University of Western Ontario, London, Ont. (Canada); Parke, G.A.R.; Disney, P.; Toy, N. [School of Engineering, University of Surrey, Guildford, Surrey GU2 7XH (United Kingdom)
2008-06-15
This paper presents a comparison between the wind-induced foundation loads measured on a type L6 transmission line tower during a field study in the UK and those computed using the UK Code of Practice for lattice tower and transmission line design (BS8100). In this work, the Code provisions have been generalised to give the wind-induced strain in each of the tower legs immediately above the foundation as a function of wind direction and wind speed at the top of the tower. The complete data set from the field monitoring has been decomposed to provide a similar formulation for comparison purposes. The analysis shows excellent agreement between the Code calculations and the measured results, within the overall accuracy of the field data. This indicates that, at least for the tower type examined here, the existing design Code provides a reliable transformation of the local wind speed at the top of the tower into tension and compression loads on the foundations. (author)
Pool swell sub-scale testing and code comparison
International Nuclear Information System (INIS)
Elisson, K.
1981-01-01
The main objective of the experiment was to investigate the pool swell dynamics in general and the forces on the lowered central part of the diaphragm between drywell and wetwell in particular. Apart from the high speed camera pressure transducers and strain gauges were used to monitor the transient. Data was recorded on a 14 channel FM recorder and then digitalised and plotted. In total more than one hundred tests were performed including parametric variations of for example geometry, break flow, initial drywell pressure and initial water level. In parallel to this experiment pool swell calculations have been performed with the computer codes COPTA and STEALTH. COPTA which is a lumped mass code for pressure suppression containment analysis has a slug pool swell mode. STEALTH which is a general purpose lagrangian hydrodynamics code has been used in a 2-D axisymmetric version. The STEALTH code has been used to calculate the radial variations in the vertical displacement and velocity of the pool surface and to predict the load on the lowered central part of the diaphragm. A comparison between the calculations and the experimental data indicates that both codes are sufficiently correct in their description of the pool swell transient. (orig.)
International Nuclear Information System (INIS)
Dozaki, Koji
2007-01-01
Structural design methods for core shroud of BWR are specified in JSME Design and Construction Code, like ASME Boiler and Pressure Vessel Code Sec. III, as a part of core support structure. Design margins are defined according to combination of the structural design method selected and service limit considered. Basically, those margins in JSME Code were determined after ASME Sec. III. Designers can select so-called twice-slope method for core shroud design among those design methods. On the other hand, flaw evaluation rules have been established for core shroud in JSME Fitness-for-Service Code. Twice-slope method is also adopted for fracture evaluation in that code even when the core shroud contains a flaw. Design margin was determined as structural factors separately from Design and Construction Code. As a natural consequence, there is a difference in those design margins between the two codes. In this paper, it is shown that the design margin in Fitness-for-Service Code is conservative by experimental evidences. Comparison of design margins between the two codes is discussed. (author)
EG and G and NASA face seal codes comparison
Basu, Prit
1994-01-01
This viewgraph presentation presents the following results for the example comparison: EG&G code with face deformations suppressed and SPIRALG agree well with each other as well as with the experimental data; 0 rpm stiffness data calculated by EG&G code are about 70-100 percent lower than that by SPIRALG; there is no appreciable difference between 0 rpm and 16,000 rpm stiffness and damping coefficients calculated by SPIRALG; and the film damping above 500 psig calculated by SPIRALG is much higher than the O-Ring secondary seal damping (e.g. 50 lbf.s/in).
Application of the TRAC-PD2 code to the simulation of the CANON experiment
International Nuclear Information System (INIS)
Neves Conti, T. das; Freitas, R.L.
1985-01-01
A comparison between the TRAC -PD2 code calculations and results from the CANON experiment is presented. The CANON experiment simulates the loss of coolant accident through the depressurization of a horizontal tube containing water at different temperatures. The experiment consist of the instantaneous rupture at one end of the tubing and the corresponding pressure and void fraction measurements during the transient. The comparison shows that the TRAC-PD2 code predicts satisfactorily the pressure and void fraction evolution in the CANON experiment. (F.C.) [pt
Comparisons of 'Identical' Simulations by the Eulerian Gyrokinetic Codes GS2 and GYRO
Bravenec, R. V.; Ross, D. W.; Candy, J.; Dorland, W.; McKee, G. R.
2003-10-01
A major goal of the fusion program is to be able to predict tokamak transport from first-principles theory. To this end, the Eulerian gyrokinetic code GS2 was developed years ago and continues to be improved [1]. Recently, the Eulerian code GYRO was developed [2]. These codes are not subject to the statistical noise inherent to particle-in-cell (PIC) codes, and have been very successful in treating electromagnetic fluctuations. GS2 is fully spectral in the radial coordinate while GYRO uses finite-differences and ``banded" spectral schemes. To gain confidence in nonlinear simulations of experiment with these codes, ``apples-to-apples" comparisons (identical profile inputs, flux-tube geometry, two species, etc.) are first performed. We report on a series of linear and nonlinear comparisons (with overall agreement) including kinetic electrons, collisions, and shaped flux surfaces. We also compare nonlinear simulations of a DIII-D discharge to measurements of not only the fluxes but also the turbulence parameters. [1] F. Jenko, et al., Phys. Plasmas 7, 1904 (2000) and refs. therein. [2] J. Candy, J. Comput. Phys. 186, 545 (2003).
P.T.S. van der Gulik (Peter); W.D. Hoff (Wouter)
2011-01-01
htmlabstractThe origin of the genetic code is a central open problem regarding the early evolution of life. Here, we consider two undeveloped but important aspects of possible scenarios for the evolutionary pathway of the translation machinery: the role of unassigned codons in early stages
Dilute: A code for studying beam evolution under rf noise
International Nuclear Information System (INIS)
Shih, H.; Ellison, J.A.; Schiesser, W.E.
1993-01-01
Longitudinal beam dynamics under rf noise has been modeled by Dome, Krinsky, and Wang using a diffusion-in-action PDE. If the primary interest is the evolution of the beam in action, it is much simpler to integrate the model PDE than to undertake tracking simulations. Here we describe the code that we developed to solve the model PDE using the numerical Method of Lines. Features of the code include (1) computation of the distribution in action for the initial beam from a Gaussian or user-supplied distribution in longitudinal phase space, (2) computation of the diffusion coefficient for white noise or from a user-supplied spectral density for non-white noise, (3) discretization of the model PDE using finite-difference or Galerkin finite-element approximations with a uniform or non-uniform grid, and (4) integration of the system of ODEs in time by the solver RKF45 or a user-supplied ODE solver
Critical roles for a genetic code alteration in the evolution of the genus Candida.
Silva, Raquel M; Paredes, João A; Moura, Gabriela R; Manadas, Bruno; Lima-Costa, Tatiana; Rocha, Rita; Miranda, Isabel; Gomes, Ana C; Koerkamp, Marian J G; Perrot, Michel; Holstege, Frank C P; Boucherie, Hélian; Santos, Manuel A S
2007-10-31
During the last 30 years, several alterations to the standard genetic code have been discovered in various bacterial and eukaryotic species. Sense and nonsense codons have been reassigned or reprogrammed to expand the genetic code to selenocysteine and pyrrolysine. These discoveries highlight unexpected flexibility in the genetic code, but do not elucidate how the organisms survived the proteome chaos generated by codon identity redefinition. In order to shed new light on this question, we have reconstructed a Candida genetic code alteration in Saccharomyces cerevisiae and used a combination of DNA microarrays, proteomics and genetics approaches to evaluate its impact on gene expression, adaptation and sexual reproduction. This genetic manipulation blocked mating, locked yeast in a diploid state, remodelled gene expression and created stress cross-protection that generated adaptive advantages under environmental challenging conditions. This study highlights unanticipated roles for codon identity redefinition during the evolution of the genus Candida, and strongly suggests that genetic code alterations create genetic barriers that speed up speciation.
Zaidman, A.; Van Rompaey, B.; Van Deursen, A.; Demeyer, S.
2010-01-01
Many software production processes advocate rigorous development testing alongside functional code writing, which implies that both test code and production code should co-evolve. To gain insight in the nature of this co-evolution, this paper proposes three views (realized by a tool called TeMo)
Comparison of Two Commercial FE-Codes for Sheet Metal Forming
International Nuclear Information System (INIS)
Revuelta, A.; Larkiola, J.; Kanervo, K.; Korhonen, A. S.; Myllykoski, P.
2007-01-01
There is urgent need to develop new advanced fast and cost-effective mass-production methods for small sheet metal components. Traditionally progressive dies have been designed by using various CAD techniques. Recent results in mass production of small sheet metal parts using progressive dies and a transfer press showed that the tool design time may be cut in up to a half by using 3D finite element simulation of forming. In numerical simulation of sheet metal forming better constitutive models are required to obtain more accurate results, reduce the time for tool design and cut the production costs further. Accurate models are needed to describe the initial yielding, subsequent work hardening and to predict the formability. In this work two commercially available finite element simulation codes, PAM-STAMP and LS-DYNA, were compared in forming of small austenitic stainless steel sheet part for electronic industry. Several constitutive models were used in both codes and the results were compared. Comparisons were made between the same models in each of the codes and also between different models in the same code. Material models ranged from very simple to advanced ones, which took into account anisotropy and both isotropic and kinematic hardening behavior. In order to make a valid comparison we employed similar finite element meshes. The effects of the material models parameters were studied and the results were compared with experiments. The effects of the computational time were also studied
Summary of aerosol code-comparison results for LWR aerosol containment tests LA1, LA2, and LA3
International Nuclear Information System (INIS)
Wright, A.L.; Wilson, J.H.; Arwood, P.C.
1987-01-01
The light-water reactor (LWR) aerosol containment experiments (LACE) are being performed in Richland, Washington, at the Hanford Engineering Development Laboratory under the leadership of an international project board and the Electric Power Research Institute. These tests have two objectives: (1) to investigate, at large scale, the inherent aerosol retention behavior in LWR containments under simulated severe accident conditions, and (2) to provide an experimental data base for validating aerosol behavior and thermal-hydraulic computer codes. Aerosol computer-code comparison activities for the LACE tests are being coordinated at the Oak Ridge National Laboratory. For each of the six experiments, pretest calculations (for code-to-code comparisons) and blind post-test calculations (for code-to-test data comparisons) are being performed. This paper presents a summary of the pretest aerosol-code results for tests LA1, LA2, and LA3
Performance Comparison of Containment PT analysis between CAP and CONTEMPT Code
Energy Technology Data Exchange (ETDEWEB)
Choo, Yeon Jun; Hong, Soon Joon; Hwang, Su Hyun; Kim, Min Ki; Lee, Byung Chul [FNC Tech., Seoul (Korea, Republic of); Ha, Sang Jun; Choi, Hoon [KHNP-CENTERAL RESEARCH INSTITUTE, Daejeon (Korea, Republic of)
2013-10-15
CAP, in the form that is linked with SPACE, computed the containment back-pressure during LOCA accident. In previous SAR (safety analysis report) report of Shin-Kori Units 3 and 4, the CONTEMPT series of codes(hereby referred to as just 'CONTEMPT') is used to evaluate the containment safety during the postulated loss-of-coolant accident (LOCA). In more detail, CONTEMPT-LT/028 was used to calculate the containment maximum PT, while CONTEMPT4/MOD5 to calculate the minimum PT. Actually, in minimum PT analysis, CONTEMPT4/MOD5, which provide back pressure condition of containment, was linked with RELAP5/MOD3.3 which calculate the amount of blowdown into containment. In this analysis, CONTEMPT4/MOD5 was modified based on KREM. CONTEMPT code was developed to predict the long term behavior of water-cooled nuclear reactor containment systems subjected to LOCA conditions. It calculates the time variation of compartment pressures, temperatures, mass and energy inventories, heat structure temperature distributions, and energy exchange with adjacent compartments, leakage on containment response. Models are provided for fan cooler and cooling spray as engineered safety systems. Any compartment may have both a liquid pool region and an air-vapor atmosphere region above the pool. Each region is assumed to have a uniform temperature, but the temperatures of the two regions may be different. As mentioned above, CONTEMP has the similar code features and it therefore is expected to show the similar analysis performance with CAP. In this study, the differences between CAP and two CONTEMPT code versions (CONTEMPT-LT/028 for maximum PT and CONTEMPT4/MOD5 for minimum PT) are, in detail, identified and the code performances were compared for the same problem. Code by code comparison was carried out to identify the difference of LOCA analysis between a series of COMTEMPT and CAP code. With regard to important factors that affect the transient behavior of compartment thermodynamic
Performance Comparison of Containment PT analysis between CAP and CONTEMPT Code
International Nuclear Information System (INIS)
Choo, Yeon Jun; Hong, Soon Joon; Hwang, Su Hyun; Kim, Min Ki; Lee, Byung Chul; Ha, Sang Jun; Choi, Hoon
2013-01-01
CAP, in the form that is linked with SPACE, computed the containment back-pressure during LOCA accident. In previous SAR (safety analysis report) report of Shin-Kori Units 3 and 4, the CONTEMPT series of codes(hereby referred to as just 'CONTEMPT') is used to evaluate the containment safety during the postulated loss-of-coolant accident (LOCA). In more detail, CONTEMPT-LT/028 was used to calculate the containment maximum PT, while CONTEMPT4/MOD5 to calculate the minimum PT. Actually, in minimum PT analysis, CONTEMPT4/MOD5, which provide back pressure condition of containment, was linked with RELAP5/MOD3.3 which calculate the amount of blowdown into containment. In this analysis, CONTEMPT4/MOD5 was modified based on KREM. CONTEMPT code was developed to predict the long term behavior of water-cooled nuclear reactor containment systems subjected to LOCA conditions. It calculates the time variation of compartment pressures, temperatures, mass and energy inventories, heat structure temperature distributions, and energy exchange with adjacent compartments, leakage on containment response. Models are provided for fan cooler and cooling spray as engineered safety systems. Any compartment may have both a liquid pool region and an air-vapor atmosphere region above the pool. Each region is assumed to have a uniform temperature, but the temperatures of the two regions may be different. As mentioned above, CONTEMP has the similar code features and it therefore is expected to show the similar analysis performance with CAP. In this study, the differences between CAP and two CONTEMPT code versions (CONTEMPT-LT/028 for maximum PT and CONTEMPT4/MOD5 for minimum PT) are, in detail, identified and the code performances were compared for the same problem. Code by code comparison was carried out to identify the difference of LOCA analysis between a series of COMTEMPT and CAP code. With regard to important factors that affect the transient behavior of compartment thermodynamic state in
Codification of LMFBR rules and comparison of codes
International Nuclear Information System (INIS)
Faure, O.; Debaene, J.P.
1993-01-01
The first part of this report presents the basic RCC-MR (regles de conception et de construction des materiels mecaniques des ilots nucleaires, reacteurs a neutrons rapides) design rules and their purpose. The second part is a qualitative comparison between RCC-MR, Code case N47 (ASME) and ETSDG Guide (MONJU Guide), made on the following topics: negligible creep test, ratcheting, creep fatigue, buckling, piping rules. An outline is given on improvements to RCC-MR rules now in progress
The FRAM code: Description and some comparisons with MGA
International Nuclear Information System (INIS)
Sampson, T.E.; Kelley, T.A.
1994-01-01
The authors describe the initial development of the FRAM gamma-ray spectrometry code for analyzing plutonium isotopics, discuss its methodology, and present some comparisons with MGA on identical items. They also present some of the features of a new Windows 3.1-based version (PC/FRAM) and describe some current measurement problems. Development of the FRAM code began in about 1985, growing out of the need at the Los Alamos TA-55 Plutonium Facility for an isotopic analysis code to give accurate results for the effective specific power of heterogeneous (Am/Pu) pyrochemical residues. These residues present a difficult challenge because the americium is present mostly in a low-Z salt matrix (AmCl 3 ) with fines and small pieces of plutonium metal dispersed throughout the salt. Plutonium gamma rays suffer different attenuation than americium gamma rays of the same energy; this makes conventional analysis with a single relative efficiency function inaccurate for Am/Pu ratios and affects the analysis in other subtle ways
A comparison of oxide thickness predictability from the perspective of codes
Energy Technology Data Exchange (ETDEWEB)
Park, Joo-Young; Shin, Hye-In; Kim, Kyung-Tae; Han, Hee-Tak; Kim, Hong-Jin; Kim, Yong-Hwan [KEPCO Nuclear Fuel Co. Ltd., Daejeon (Korea, Republic of)
2016-10-15
In Korea, OPR1000 and Westinghouse type nuclear power plant reactor fuel rods oxide thickness has been evaluated by imported code A. Because of this, there have been multiple constraints in operation and maintenance of fuel rod design system. For this reason, there has been a growing demand to establish an independent fuel rod design system. To meet this goal, KNF has recently developed its own code B for fuel rod design. The objective of this study is to compare oxide thickness prediction performance between code A and code B and to check the validity of predicting corrosion behaviors of newly developed code B. This study is based on Pool Side Examination (PSE) data for the performance confirmation. For the examination procedures, the oxide thickness measurement methods and equipment of PSE are described in detail. In this study, code B is confirmed conservatism and validity on evaluating cladding oxide thickness through the comparison with code A. Code prediction values show higher value than measured data from PSE. Throughout this study, the values by code B are evaluated and proved to be valid in a view point of the oxide thickness evaluation. However, the code B input for prediction has been made by designer's judgment with complex handwork that might be lead to excessive conservative result and ineffective design process with some possibility of errors.
Comparisons of coded aperture imaging using various apertures and decoding methods
International Nuclear Information System (INIS)
Chang, L.T.; Macdonald, B.; Perez-Mendez, V.
1976-07-01
The utility of coded aperture γ camera imaging of radioisotope distributions in Nuclear Medicine is in its ability to give depth information about a three dimensional source. We have calculated imaging with Fresnel zone plate and multiple pinhole apertures to produce coded shadows and reconstruction of these shadows using correlation, Fresnel diffraction, and Fourier transform deconvolution. Comparisons of the coded apertures and decoding methods are made by evaluating their point response functions both for in-focus and out-of-focus image planes. Background averages and standard deviations were calculated. In some cases, background subtraction was made using combinations of two complementary apertures. Results using deconvolution reconstruction for finite numbers of events are also given
Protein sequence comparison and protein evolution
Energy Technology Data Exchange (ETDEWEB)
Pearson, W.R. [Univ. of Virginia, Charlottesville, VA (United States). Dept. of Biochemistry
1995-12-31
This tutorial was one of eight tutorials selected to be presented at the Third International Conference on Intelligent Systems for Molecular Biology which was held in the United Kingdom from July 16 to 19, 1995. This tutorial examines how the information conserved during the evolution of a protein molecule can be used to infer reliably homology, and thus a shared proteinfold and possibly a shared active site or function. The authors start by reviewing a geological/evolutionary time scale. Next they look at the evolution of several protein families. During the tutorial, these families will be used to demonstrate that homologous protein ancestry can be inferred with confidence. They also examine different modes of protein evolution and consider some hypotheses that have been presented to explain the very earliest events in protein evolution. The next part of the tutorial will examine the technical aspects of protein sequence comparison. Both optimal and heuristic algorithms and their associated parameters that are used to characterize protein sequence similarities are discussed. Perhaps more importantly, they survey the statistics of local similarity scores, and how these statistics can both be used to improve the selectivity of a search and to evaluate the significance of a match. They them examine distantly related members of three protein families, the serine proteases, the glutathione transferases, and the G-protein-coupled receptors (GCRs). Finally, the discuss how sequence similarity can be used to examine internal repeated or mosaic structures in proteins.
Comparison of accelerator codes for a RHIC [Relativistic Heavy Ion Collider] lattice
International Nuclear Information System (INIS)
Milutinovic, J.; Ruggiero, A.G.
1989-01-01
We present the results of comparison of performances of several tracking or/and analysis codes. The basic purpose of this program was to assess reliability and accuracy of these codes, i.e., to determine the so-called ''error bars'' for the predicted values of tunes and other lattice functions as a minimum and, if possible, to discover potential difficulties with underlying physical models in these codes, inadequate algorithms, residual bugs and the like. Not only have we been able to determine the error bars, which for instance for the tunes at dp/p = +1% are Δν/sub ξ/ = 0.0027, Δν/sub y/ = 0.0010, but also our program has brought about improvements of several codes. 8 refs., 3 figs., 2 tabs
Adams, Bradley J; Aschheim, Kenneth W
2016-01-01
Comparison of antemortem and postmortem dental records is a leading method of victim identification, especially for incidents involving a large number of decedents. This process may be expedited with computer software that provides a ranked list of best possible matches. This study provides a comparison of the most commonly used conventional coding and sorting algorithms used in the United States (WinID3) with a simplified coding format that utilizes an optimized sorting algorithm. The simplified system consists of seven basic codes and utilizes an optimized algorithm based largely on the percentage of matches. To perform this research, a large reference database of approximately 50,000 antemortem and postmortem records was created. For most disaster scenarios, the proposed simplified codes, paired with the optimized algorithm, performed better than WinID3 which uses more complex codes. The detailed coding system does show better performance with extremely large numbers of records and/or significant body fragmentation. © 2015 American Academy of Forensic Sciences.
Automated Testing Infrastructure and Result Comparison for Geodynamics Codes
Heien, E. M.; Kellogg, L. H.
2013-12-01
The geodynamics community uses a wide variety of codes on a wide variety of both software and hardware platforms to simulate geophysical phenomenon. These codes are generally variants of finite difference or finite element calculations involving Stokes flow or wave propagation. A significant problem is that codes of even low complexity will return different results depending on the platform due to slight differences in hardware, software, compiler, and libraries. Furthermore, changes to the codes during development may affect solutions in unexpected ways such that previously validated results are altered. The Computational Infrastructure for Geodynamics (CIG) is funded by the NSF to enhance the capabilities of the geodynamics community through software development. CIG has recently done extensive work in setting up an automated testing and result validation system based on the BaTLab system developed at the University of Wisconsin, Madison. This system uses 16 variants of Linux and Mac platforms on both 32 and 64-bit processors to test several CIG codes, and has also recently been extended to support testing on the XSEDE TACC (Texas Advanced Computing Center) Stampede cluster. In this work we overview the system design and demonstrate how automated testing and validation occurs and results are reported. We also examine several results from the system from different codes and discuss how changes in compilers and libraries affect the results. Finally we detail some result comparison tools for different types of output (scalar fields, velocity fields, seismogram data), and discuss within what margins different results can be considered equivalent.
Detecting non-coding selective pressure in coding regions
Directory of Open Access Journals (Sweden)
Blanchette Mathieu
2007-02-01
Full Text Available Abstract Background Comparative genomics approaches, where orthologous DNA regions are compared and inter-species conserved regions are identified, have proven extremely powerful for identifying non-coding regulatory regions located in intergenic or intronic regions. However, non-coding functional elements can also be located within coding region, as is common for exonic splicing enhancers, some transcription factor binding sites, and RNA secondary structure elements affecting mRNA stability, localization, or translation. Since these functional elements are located in regions that are themselves highly conserved because they are coding for a protein, they generally escaped detection by comparative genomics approaches. Results We introduce a comparative genomics approach for detecting non-coding functional elements located within coding regions. Codon evolution is modeled as a mixture of codon substitution models, where each component of the mixture describes the evolution of codons under a specific type of coding selective pressure. We show how to compute the posterior distribution of the entropy and parsimony scores under this null model of codon evolution. The method is applied to a set of growth hormone 1 orthologous mRNA sequences and a known exonic splicing elements is detected. The analysis of a set of CORTBP2 orthologous genes reveals a region of several hundred base pairs under strong non-coding selective pressure whose function remains unknown. Conclusion Non-coding functional elements, in particular those involved in post-transcriptional regulation, are likely to be much more prevalent than is currently known. With the numerous genome sequencing projects underway, comparative genomics approaches like that proposed here are likely to become increasingly powerful at detecting such elements.
Multi-dimensional free-electron laser simulation codes: a comparison study
Biedron, S G; Dejus, Roger J; Faatz, B; Freund, H P; Milton, S V; Nuhn, H D; Reiche, S
2000-01-01
A self-amplified spontaneous emission (SASE) free-electron laser (FEL) is under construction at the Advanced Photon Source (APS). Five FEL simulation codes were used in the design phase: GENESIS, GINGER, MEDUSA, RON, and TDA3D. Initial comparisons between each of these independent formulations show good agreement for the parameters of the APS SASE FEL.
Multi-dimensional free-electron laser simulation codes: a comparison study
International Nuclear Information System (INIS)
Biedron, S. G.; Chae, Y. C.; Dejus, R. J.; Faatz, B.; Freund, H. P.; Milton, S. V.; Nuhn, H.-D.; Reiche, S.
1999-01-01
A self-amplified spontaneous emission (SASE) free-electron laser (FEL) is under construction at the Advanced Photon Source (APS). Five FEL simulation codes were used in the design phase: GENESIS, GINGER, MEDUSA, RON, and TDA3D. Initial comparisons between each of these independent formulations show good agreement for the parameters of the APS SASE FEL
A comparison of two three-dimensional shell-element transient electromagnetics codes
International Nuclear Information System (INIS)
Yugo, J.J.; Williamson, D.E.
1992-01-01
Electromagnetic forces due to eddy currents strongly influence the design of components for the next generation of fusion devices. An effort has been made to benchmark two computer programs used to generate transient electromagnetic loads: SPARK and EddyCuFF. Two simple transient field problems were analyzed, both of which had been previously analyzed by the SPARK code with results recorded in the literature. A third problem that uses an ITER inboard blanket benchmark model was analyzed as well. This problem was driven with a self-consistent, distributed multifilament plasma model generated by an axisymmetric physics code. The benchmark problems showed good agreement between the two shell-element codes. Variations in calculated eddy currents of 1--3% have been found for similar, finely meshed models. A difference of 8% was found in induced current and 20% in force for a coarse mesh and complex, multifilament field driver. Because comparisons were made to results obtained from literature, model preparation and code execution times were not evaluated
Why a New Code for Novae Evolution and Mass Transfer in Binaries?
Directory of Open Access Journals (Sweden)
G. Shaviv
2015-02-01
Full Text Available One of the most interesting problems in Cataclysmic Variables is the long time scale evolution. This problem appears in long time evolution, which is also very important in the search for the progenitor of SN Ia. The classical approach to overcome this problem in the simulation of novae evolution is to assume: (1 A constant in time, rate of mass transfer. (2 The mass transfer rate that does not vary throughout the life time of the nova, even when many eruptions are considered. Here we show that these assumptions are valid only for a single thermonuclear flash and such a calculation cannot be the basis for extrapolation of the behavior over many flashes. In particular, such calculation cannot be used to predict under what conditions an accreting WD may reach the Chandrasekhar mass and collapse. We report on a new code to attack this problem. The basic idea is to create two parallel processes, one calculating the mass losing star and the other the accreting white dwarf. The two processes communicate continuously with each other and follow the time depended mass loss.
Deep time perspective on turtle neck evolution: chasing the Hox code by vertebral morphology.
Böhmer, Christine; Werneburg, Ingmar
2017-08-21
The unparalleled ability of turtle neck retraction is possible in three different modes, which characterize stem turtles, living side-necked (Pleurodira), and hidden-necked (Cryptodira) turtles, respectively. Despite the conservatism in vertebral count among turtles, there is significant functional and morphological regionalization in the cervical vertebral column. Since Hox genes play a fundamental role in determining the differentiation in vertebra morphology and based on our reconstruction of evolutionary genetics in deep time, we hypothesize genetic differences among the turtle groups and between turtles and other land vertebrates. We correlated anterior Hox gene expression and the quantifiable shape of the vertebrae to investigate the morphological modularity in the neck across living and extinct turtles. This permitted the reconstruction of the hypothetical ancestral Hox code pattern of the whole turtle clade. The scenario of the evolution of axial patterning in turtles indicates shifts in the spatial expression of HoxA-5 in relation to the reduction of cervical ribs in modern turtles and of HoxB-5 linked with a lower morphological differentiation between the anterior cervical vertebrae observed in cryptodirans. By comparison with the mammalian pattern, we illustrate how the fixed count of eight cervical vertebrae in turtles resulted from the emergence of the unique turtle shell.
Schwab, J. R.; Povinelli, L. A.
1984-01-01
A comparison of the secondary flows computed by the viscous Kreskovsky-Briley-McDonald code and the inviscid Denton code with benchmark experimental data for turning duct is presented. The viscous code is a fully parabolized space-marching Navier-Stokes solver while the inviscid code is a time-marching Euler solver. The experimental data were collected by Taylor, Whitelaw, and Yianneskis with a laser Doppler velocimeter system in a 90 deg turning duct of square cross-section. The agreement between the viscous and inviscid computations was generally very good for the streamwise primary velocity and the radial secondary velocity, except at the walls, where slip conditions were specified for the inviscid code. The agreement between both the computations and the experimental data was not as close, especially at the 60.0 deg and 77.5 deg angular positions within the duct. This disagreement was attributed to incomplete modelling of the vortex development near the suction surface.
Comparison of Zgoubi and S-Code regarding the FFAG muon acceleration
International Nuclear Information System (INIS)
Fourrier, J.; Machida, S.
2006-06-01
The high flux accelerator based neutrino source is foreseen as one of the next generation facilities of particle physics. Called Neutrino Factory (NuFact), it will be based on a muon storage ring where muons will decay, creating high flux neutrino beams. Muons are supposed to be accelerated from 5 to 20 GeV before being injected into the storage ring. In that purpose, Fixed Field Alternating Gradient accelerators (FFAG) are one of the possibilities. Cell designs have been done and tracking studies are on their way using codes such as MAD, S-Code or Zgoubi. In order to cross-check results so obtained, we have performed comparisons between S-Code and Zgoubi at Rutherford Appleton Laboratory. The present report will explain the different simulations done and the results. The paper has the following contents: 1. Introduction; 2. Time of Flight comparisons; 3. Particle acceleration with different emittances; 4. Bunch acceleration. In conclusion it is shown that the difference of time of flight between the particle 1 and the others is comparable from Zgoubi to S- Code. Nevertheless, further investigation is necessary to make sure that the same revolution time will be found with the same initial conditions. Concerning the acceleration it was found that that the larger the emittance the less efficient appears to be the acceleration. Particles on ellipses 10 to 40 π mm rad are accelerated beyond 9 GeV while particles on ellipse 50 π mm rad are only accelerated up to 7.5 GeV and those on 60 π mm rad ellipse just reach 6 GeV. Thus, a beam whom emittance would be larger than 30 π mm rad would not be accelerated enough to reach 10 GeV and to be injected into the second FFAG. In the same way as for the first FFAG the larger the emittance the less efficient the acceleration. Particles on ellipses 10 to 40 π mm rad are accelerated beyond 18 GeV while particles on ellipses 50 and 60 π mm rad are only accelerated up to 12 GeV. Thus, beams whom emittance is lower than 30 π mm
International Nuclear Information System (INIS)
Sayer, R.O.; Peng, Y.K.M.; Strickler, D.J.; Jardin, S.C.
1990-01-01
The Tokamak Simulation Code and the TWIR postprocessor code have been used to develop credible plasma disruption scenarios for the Compact Ignition Tokamak (CIT) in order to predict the evolution of forces on CIT conducting structures and to provide results required for detailed structural design analysis. The extreme values of net radial and vertical vacuum vessel (VV) forces were found to be F R =-12.0 MN/rad and F Z =-3.0 MN/rad, respectively, for the CIT 2.1-m, 11-MA design. Net VV force evolution was found to be altered significantly by two mechanisms not noted previously. The first, due to poloidal VV currents arising from increased plasma paramagnetism during thermal quench, reduces the magnitude of the extreme F R by 15-50% and modifies the distribution of forces substantially. The second effect is that slower plasma current decay rates give more severe net vertical VV loads because the current decay occurs when the plasma has moved farther from midplane than is the case for faster decay rates. 7 refs., 9 figs., 1 tab
Comparison of TITAN hybrid deterministic transport code and MCNP5 for simulation of SPECT
International Nuclear Information System (INIS)
Royston, K.; Haghighat, A.; Yi, C.
2010-01-01
Traditionally, Single Photon Emission Computed Tomography (SPECT) simulations use Monte Carlo methods. The hybrid deterministic transport code TITAN has recently been applied to the simulation of a SPECT myocardial perfusion study. The TITAN SPECT simulation uses the discrete ordinates formulation in the phantom region and a simplified ray-tracing formulation outside of the phantom. A SPECT model has been created in the Monte Carlo Neutral particle (MCNP)5 Monte Carlo code for comparison. In MCNP5 the collimator is directly modeled, but TITAN instead simulates the effect of collimator blur using a circular ordinate splitting technique. Projection images created using the TITAN code are compared to results using MCNP5 for three collimator acceptance angles. Normalized projection images for 2.97 deg, 1.42 deg and 0.98 deg collimator acceptance angles had maximum relative differences of 21.3%, 11.9% and 8.3%, respectively. Visually the images are in good agreement. Profiles through the projection images were plotted to find that the TITAN results followed the shape of the MCNP5 results with some differences in magnitude. A timing comparison on 16 processors found that the TITAN code completed the calculation 382 to 2787 times faster than MCNP5. Both codes exhibit good parallel performance. (author)
A prescription and fast code for the long-term evolution of star clusters
Alexander, Poul E. R.; Gieles, Mark
2012-06-01
We introduce the star cluster evolution code Evolve Me A Cluster of StarS (EMACSS), a simple yet physically motivated computational model that describes the evolution of some fundamental properties of star clusters in static tidal fields. We base our prescription upon the flow of energy within the cluster, which is a constant fraction of the total energy per half-mass relaxation time. According to Hénon's predictions, this flow is independent of the precise mechanisms for energy production within the core, and therefore does not require a complete description of the many-body interactions therein. For a cluster of equal-mass stars, we use dynamical theory and analytic descriptions of escape mechanisms to construct a series of coupled differential equations expressing the evolution of cluster mass and radius. These equations are numerically solved using a fourth-order Runge-Kutta integration kernel, and the results benchmarked against a data base of direct N-body simulations. We use simulations containing a modest initial number of stars (1024 ≤N≤ 65 536) and point-mass tidal fields of various strengths. Our prescription is publicly available and reproduces the N-body results to within ˜10 per cent accuracy for the entire post-collapse evolution of star clusters.
Impact of dynamic rate coding aspects of mobile phone networks on forensic voice comparison.
Alzqhoul, Esam A S; Nair, Balamurali B T; Guillemin, Bernard J
2015-09-01
Previous studies have shown that landline and mobile phone networks are different in their ways of handling the speech signal, and therefore in their impact on it. But the same is also true of the different networks within the mobile phone arena. There are two major mobile phone technologies currently in use today, namely the global system for mobile communications (GSM) and code division multiple access (CDMA) and these are fundamentally different in their design. For example, the quality of the coded speech in the GSM network is a function of channel quality, whereas in the CDMA network it is determined by channel capacity (i.e., the number of users sharing a cell site). This paper examines the impact on the speech signal of a key feature of these networks, namely dynamic rate coding, and its subsequent impact on the task of likelihood-ratio-based forensic voice comparison (FVC). Surprisingly, both FVC accuracy and precision are found to be better for both GSM- and CDMA-coded speech than for uncoded. Intuitively one expects FVC accuracy to increase with increasing coded speech quality. This trend is shown to occur for the CDMA network, but, surprisingly, not for the GSM network. Further, in respect to comparisons between these two networks, FVC accuracy for CDMA-coded speech is shown to be slightly better than for GSM-coded speech, particularly when the coded-speech quality is high, but in terms of FVC precision the two networks are shown to be very similar. Copyright © 2015 The Chartered Society of Forensic Sciences. Published by Elsevier Ireland Ltd. All rights reserved.
Combinatorial neural codes from a mathematical coding theory perspective.
Curto, Carina; Itskov, Vladimir; Morrison, Katherine; Roth, Zachary; Walker, Judy L
2013-07-01
Shannon's seminal 1948 work gave rise to two distinct areas of research: information theory and mathematical coding theory. While information theory has had a strong influence on theoretical neuroscience, ideas from mathematical coding theory have received considerably less attention. Here we take a new look at combinatorial neural codes from a mathematical coding theory perspective, examining the error correction capabilities of familiar receptive field codes (RF codes). We find, perhaps surprisingly, that the high levels of redundancy present in these codes do not support accurate error correction, although the error-correcting performance of receptive field codes catches up to that of random comparison codes when a small tolerance to error is introduced. However, receptive field codes are good at reflecting distances between represented stimuli, while the random comparison codes are not. We suggest that a compromise in error-correcting capability may be a necessary price to pay for a neural code whose structure serves not only error correction, but must also reflect relationships between stimuli.
The implementation of a toroidal limiter model into the gyrokinetic code ELMFIRE
Energy Technology Data Exchange (ETDEWEB)
Leerink, S.; Janhunen, S.J.; Kiviniemi, T.P.; Nora, M. [Euratom-Tekes Association, Helsinki University of Technology (Finland); Heikkinen, J.A. [Euratom-Tekes Association, VTT, P.O. Box 1000, FI-02044 VTT (Finland); Ogando, F. [Universidad Nacional de Educacion a Distancia, Madrid (Spain)
2008-03-15
The ELMFIRE full nonlinear gyrokinetic simulation code has been developed for calculations of plasma evolution and dynamics of turbulence in tokamak geometry. The code is applicable for calculations of strong perturbations in particle distribution function, rapid transients and steep gradients in plasma. Benchmarking against experimental reflectometry data from the FT2 tokamak is being discussed and in this paper a model for comparison and studying poloidal velocity is presented. To make the ELMFIRE code suitable for scrape-off layer simulations a simplified toroidal limiter model has been implemented. The model is be discussed and first results are presented. (copyright 2008 WILEY-VCH Verlag GmbH and Co. KGaA, Weinheim) (orig.)
Comparison of computer codes related to the sodium oxide aerosol behavior in a containment building
International Nuclear Information System (INIS)
Fermandjian, J.
1984-09-01
In order to ensure that the problems of describing the physical behavior of sodium aerosols, during hypothetical fast reactor accidents, were adequately understood, a comparison of the computer codes (ABC/INTG, PNC, Japan; AEROSIM, UKAEA/SRD, United Kingdom; PARDISEKO IIIb, KfK, Germany; AEROSOLS/A2 and AEROSOLS/B1, CEA France) was undertaken in the frame of the CEC: exercise in which code users have run their own codes with a prearranged input
International Nuclear Information System (INIS)
Nakamura, Y.; Matsumoto, T.; Wakatani, M.; Ichiguchi, K.; Garcia, L.; Carreras, B.A.
1995-04-01
A particular configuration of the LHD stellarator with an unusually flat pressure profile has been chosen to be a test case for comparison of the MHD stability property predictions of different three-dimensional and averaged codes for the purpose of code comparison and validation. In particular, two relatively localized instabilities, the fastest growing modes with toroidal mode number n = 2 and n = 3 were studied using several different codes, with the good agreement that has been found providing justification for the use of any of them for equilibria of the type considered
Code-code comparisons of DIVIMP's 'onion-skin model' and the EDGE2D fluid code
International Nuclear Information System (INIS)
Stangeby, P.C.; Elder, J.D.; Horton, L.D.; Simonini, R.; Taroni, A.; Matthews, O.F.; Monk, R.D.
1997-01-01
In onion-skin modelling, O-SM, of the edge plasma, the cross-field power and particle flows are treated very simply e.g. as spatially uniform. The validity of O-S modelling requires demonstration that such approximations can still result in reasonable solutions for the edge plasma. This is demonstrated here by comparison of O-SM with full 2D fluid edge solutions generated by the EDGE2D code. The target boundary conditions for the O-SM are taken from the EDGE2D output and the complete O-SM solutions are then compared with the EDGE2D ones. Agreement is generally within 20% for n e , T e , T i and parallel particle flux density Γ for the medium and high recycling JET cases examined and somewhat less good for a strongly detached CMOD example. (orig.)
Comparison of SISEC code simulations with earthquake data of ordinary and base-isolated buildings
International Nuclear Information System (INIS)
Wang, C.Y.; Gvildys, J.
1991-01-01
At Argonne National Laboratory (ANL), a 3-D computer program SISEC (Seismic Isolation System Evaluation Code) is being developed for simulating the system response of isolated and ordinary structures (Wang et al. 1991). This paper describes comparison of SISEC code simulations with building response data of actual earthquakes. To ensure the accuracy of analytical simulations, recorded data of full-size reinforced concrete structures located in Sendai, Japan are used in this benchmark comparison. The test structures consist of two three-story buildings, one base-isolated and the other one ordinary founded. They were constructed side by side to investigate the effect of base isolation on the acceleration response. Among 20 earthquakes observed since April 1989, complete records of three representative earthquakes, no.2, no.6, and no.17, are used for the code validation presented in this paper. Correlations of observed and calculated accelerations at all instrument locations are made. Also, relative response characteristics of ordinary and isolated building structures are investigated. (J.P.N.)
COCOA code for creating mock observations of star cluster models
Askar, Abbas; Giersz, Mirek; Pych, Wojciech; Dalessandro, Emanuele
2018-04-01
We introduce and present results from the COCOA (Cluster simulatiOn Comparison with ObservAtions) code that has been developed to create idealized mock photometric observations using results from numerical simulations of star cluster evolution. COCOA is able to present the output of realistic numerical simulations of star clusters carried out using Monte Carlo or N-body codes in a way that is useful for direct comparison with photometric observations. In this paper, we describe the COCOA code and demonstrate its different applications by utilizing globular cluster (GC) models simulated with the MOCCA (MOnte Carlo Cluster simulAtor) code. COCOA is used to synthetically observe these different GC models with optical telescopes, perform point spread function photometry, and subsequently produce observed colour-magnitude diagrams. We also use COCOA to compare the results from synthetic observations of a cluster model that has the same age and metallicity as the Galactic GC NGC 2808 with observations of the same cluster carried out with a 2.2 m optical telescope. We find that COCOA can effectively simulate realistic observations and recover photometric data. COCOA has numerous scientific applications that maybe be helpful for both theoreticians and observers that work on star clusters. Plans for further improving and developing the code are also discussed in this paper.
Field-based tests of geochemical modeling codes: New Zealand hydrothermal systems
International Nuclear Information System (INIS)
Bruton, C.J.; Glassley, W.E.; Bourcier, W.L.
1993-12-01
Hydrothermal systems in the Taupo Volcanic Zone, North Island, New Zealand are being used as field-based modeling exercises for the EQ3/6 geochemical modeling code package. Comparisons of the observed state and evolution of the hydrothermal systems with predictions of fluid-solid equilibria made using geochemical modeling codes will determine how the codes can be used to predict the chemical and mineralogical response of the environment to nuclear waste emplacement. Field-based exercises allow us to test the models on time scales unattainable in the laboratory. Preliminary predictions of mineral assemblages in equilibrium with fluids sampled from wells in the Wairakei and Kawerau geothermal field suggest that affinity-temperature diagrams must be used in conjunction with EQ6 to minimize the effect of uncertainties in thermodynamic and kinetic data on code predictions
International Nuclear Information System (INIS)
Roberts, H.A.; Smith, C.P.
1976-02-01
Provision of capability for performing steady-state calculations in RELAP-UK has led to the possibility of the wider use of this code for steady-state assessments of the behaviour of commercial systems with complicated circuit arrangements. In the studies discussed in this report, the first objective is to demonstrate the performance of the RELAP-UK code in a steady-state role, and to make comparisons with the CUSH code, and with measurements obtained on the Winfrith Steam-Generating Heavy Water Reactor. (U.K.)
International Nuclear Information System (INIS)
Homma, Y.; Moriwaki, H.; Ikeda, K.; Ohdi, S.
2013-01-01
This paper deals with the verification of the 3 dimensional triangular prismatic discrete ordinates transport calculation code ENSEMBLE-TRIZ by comparison with the multi-group Monte Carlo calculation code GMVP in a large fast breeder reactor. The reactor is a 750 MWe electric power sodium cooled reactor. Nuclear characteristics are calculated at the beginning of cycle of an initial core and at the beginning and the end of cycle of an equilibrium core. According to the calculations, the differences between the two methodologies are smaller than 0.0002 Δk in the multiplication factor, relatively about 1% in the control rod reactivity, and 1% in the sodium void reactivity. (authors)
Position specific variation in the rate of evolution intranscription factor binding sites
Energy Technology Data Exchange (ETDEWEB)
Moses, Alan M.; Chiang, Derek Y.; Kellis, Manolis; Lander, EricS.; Eisen, Michael B.
2003-08-28
The binding sites of sequence specific transcription factors are an important and relatively well-understood class of functional non-coding DNAs. Although a wide variety of experimental and computational methods have been developed to characterize transcription factor binding sites, they remain difficult to identify. Comparison of non-coding DNA from related species has shown considerable promise in identifying these functional non-coding sequences, even though relatively little is known about their evolution. Here we analyze the genome sequences of the budding yeasts Saccharomyces cerevisiae, S. bayanus, S. paradoxus and S. mikataeto study the evolution of transcription factor binding sites. As expected, we find that both experimentally characterized and computationally predicted binding sites evolve slower than surrounding sequence, consistent with the hypothesis that they are under purifying selection. We also observe position-specific variation in the rate of evolution within binding sites. We find that the position-specific rate of evolution is positively correlated with degeneracy among binding sites within S. cerevisiae. We test theoretical predictions for the rate of evolution at positions where the base frequencies deviate from background due to purifying selection and find reasonable agreement with the observed rates of evolution. Finally, we show how the evolutionary characteristics of real binding motifs can be used to distinguish them from artifacts of computational motif finding algorithms. As has been observed for protein sequences, the rate of evolution in transcription factor binding sites varies with position, suggesting that some regions are under stronger functional constraint than others. This variation likely reflects the varying importance of different positions in the formation of the protein-DNA complex. The characterization of the pattern of evolution in known binding sites will likely contribute to the effective use of comparative
Comparison of results between different precision MAFIA codes
International Nuclear Information System (INIS)
Farkas, D.; Tice, B.
1990-01-01
In order to satisfy the inquiries of the Mafia Code users at SLAC, an evaluation of these codes was done. This consisted of running a cavity with known solutions. This study considered only the time independent solutions. No wake-field calculations were tried. The two machines involved were the NMFECC Cray (e-machine) at LLNL and the IBM/3081 at SLAC. The primary difference between the implementation of the codes on these machines is that the Cray has 64-bit accuracy while the IBM version has 32-bit accuracy. Unfortunately this study is incomplete as the Post-processor (P3) could not be made to work properly on the SLAC machine. This meant that no q's were calculated and no field patterns were generated. A certain amount of guessing had to be done when constructing the comparison tables. This problem aside, the probable conclusions that may be drawn are: (1) thirty-two bit precision is adequate for frequency determination; (2) sixty-four bit precision is desirable for field determination. This conclusion is deduced from the accuracy statistics. The cavity selected for study was a rectangular one with the dimensions (4,3,5) in centimeters. Only half of this cavity was used (2,3,5) with the x dimension being the one that was halved. The boundary conditions (B.C.) on the plane of symmetry were varied between Neumann and Dirichlet so as to cover all possible modes. Ten (10) modes were ran for each boundary condition
Santos, José; Monteagudo, Angel
2011-02-21
As the canonical code is not universal, different theories about its origin and organization have appeared. The optimization or level of adaptation of the canonical genetic code was measured taking into account the harmful consequences resulting from point mutations leading to the replacement of one amino acid for another. There are two basic theories to measure the level of optimization: the statistical approach, which compares the canonical genetic code with many randomly generated alternative ones, and the engineering approach, which compares the canonical code with the best possible alternative. Here we used a genetic algorithm to search for better adapted hypothetical codes and as a method to guess the difficulty in finding such alternative codes, allowing to clearly situate the canonical code in the fitness landscape. This novel proposal of the use of evolutionary computing provides a new perspective in the open debate between the use of the statistical approach, which postulates that the genetic code conserves amino acid properties far better than expected from a random code, and the engineering approach, which tends to indicate that the canonical genetic code is still far from optimal. We used two models of hypothetical codes: one that reflects the known examples of codon reassignment and the model most used in the two approaches which reflects the current genetic code translation table. Although the standard code is far from a possible optimum considering both models, when the more realistic model of the codon reassignments was used, the evolutionary algorithm had more difficulty to overcome the efficiency of the canonical genetic code. Simulated evolution clearly reveals that the canonical genetic code is far from optimal regarding its optimization. Nevertheless, the efficiency of the canonical code increases when mistranslations are taken into account with the two models, as indicated by the fact that the best possible codes show the patterns of the
Directory of Open Access Journals (Sweden)
Monteagudo Ángel
2011-02-01
Full Text Available Abstract Background As the canonical code is not universal, different theories about its origin and organization have appeared. The optimization or level of adaptation of the canonical genetic code was measured taking into account the harmful consequences resulting from point mutations leading to the replacement of one amino acid for another. There are two basic theories to measure the level of optimization: the statistical approach, which compares the canonical genetic code with many randomly generated alternative ones, and the engineering approach, which compares the canonical code with the best possible alternative. Results Here we used a genetic algorithm to search for better adapted hypothetical codes and as a method to guess the difficulty in finding such alternative codes, allowing to clearly situate the canonical code in the fitness landscape. This novel proposal of the use of evolutionary computing provides a new perspective in the open debate between the use of the statistical approach, which postulates that the genetic code conserves amino acid properties far better than expected from a random code, and the engineering approach, which tends to indicate that the canonical genetic code is still far from optimal. We used two models of hypothetical codes: one that reflects the known examples of codon reassignment and the model most used in the two approaches which reflects the current genetic code translation table. Although the standard code is far from a possible optimum considering both models, when the more realistic model of the codon reassignments was used, the evolutionary algorithm had more difficulty to overcome the efficiency of the canonical genetic code. Conclusions Simulated evolution clearly reveals that the canonical genetic code is far from optimal regarding its optimization. Nevertheless, the efficiency of the canonical code increases when mistranslations are taken into account with the two models, as indicated by the
Coding in pigeons: Multiple-coding versus single-code/default strategies.
Pinto, Carlos; Machado, Armando
2015-05-01
To investigate the coding strategies that pigeons may use in a temporal discrimination tasks, pigeons were trained on a matching-to-sample procedure with three sample durations (2s, 6s and 18s) and two comparisons (red and green hues). One comparison was correct following 2-s samples and the other was correct following both 6-s and 18-s samples. Tests were then run to contrast the predictions of two hypotheses concerning the pigeons' coding strategies, the multiple-coding and the single-code/default. According to the multiple-coding hypothesis, three response rules are acquired, one for each sample. According to the single-code/default hypothesis, only two response rules are acquired, one for the 2-s sample and a "default" rule for any other duration. In retention interval tests, pigeons preferred the "default" key, a result predicted by the single-code/default hypothesis. In no-sample tests, pigeons preferred the key associated with the 2-s sample, a result predicted by multiple-coding. Finally, in generalization tests, when the sample duration equaled 3.5s, the geometric mean of 2s and 6s, pigeons preferred the key associated with the 6-s and 18-s samples, a result predicted by the single-code/default hypothesis. The pattern of results suggests the need for models that take into account multiple sources of stimulus control. © Society for the Experimental Analysis of Behavior.
Energy Technology Data Exchange (ETDEWEB)
Jonkman, J.; Larsen, T.; Hansen, A.; Nygaard, T.; Maus, K.; Karimirad, M.; Gao, Z.; Moan, T.; Fylling, I.
2010-04-01
Offshore wind turbines are designed and analyzed using comprehensive simulation codes that account for the coupled dynamics of the wind inflow, aerodynamics, elasticity, and controls of the turbine, along with the incident waves, sea current, hydrodynamics, and foundation dynamics of the support structure. This paper describes the latest findings of the code-to-code verification activities of the Offshore Code Comparison Collaboration, which operates under Subtask 2 of the International Energy Agency Wind Task 23. In the latest phase of the project, participants used an assortment of codes to model the coupled dynamic response of a 5-MW wind turbine installed on a floating spar buoy in 320 m of water. Code predictions were compared from load-case simulations selected to test different model features. The comparisons have resulted in a greater understanding of offshore floating wind turbine dynamics and modeling techniques, and better knowledge of the validity of various approximations. The lessons learned from this exercise have improved the participants' codes, thus improving the standard of offshore wind turbine modeling.
Comparison of LIFE-4 and TEMECH code predictions with TREAT transient test data
International Nuclear Information System (INIS)
Gneiting, B.C.; Bard, F.E.; Hunter, C.W.
1984-09-01
Transient tests in the TREAT reactor were performed on FFTF Reference design mixed-oxide fuel pins, most of which had received prior steady-state irradiation in the EBR-II reactor. These transient test results provide a data base for calibration and verification of fuel performance codes and for evaluation of processes that affect pin damage during transient events. This paper presents a comparison of the LIFE-4 and TEMECH fuel pin thermal/mechanical analysis codes with the results from 20 HEDL TREAT experiments, ten of which resulted in pin failure. Both the LIFE-4 and TEMECH codes provided an adequate representation of the thermal and mechanical data from the TREAT experiments. Also, a criterion for 50% probability of pin failure was developed for each code using an average cumulative damage fraction value calculated for the pins that failed. Both codes employ the two major cladding loading mechanisms of differential thermal expansion and central cavity pressurization which were demonstrated by the test results. However, a detailed evaluation of the code predictions shows that the two code systems weigh the loading mechanism differently to reach the same end points of the TREAT transient results
OECD International Standard Problem number 34. Falcon code comparison report
International Nuclear Information System (INIS)
Williams, D.A.
1994-12-01
ISP-34 is the first ISP to address fission product transport issues and has been strongly supported by a large number of different countries and organisations. The ISP is based on two experiments, FAL-ISP-1 and FAL-ISP-2, which were conducted in AEA's Falcon facility. Specific features of the experiments include quantification of chemical effects and aerosol behaviour. In particular, multi-component aerosol effects and vapour-aerosol interactions can all be investigated in the Falcon facility. Important parameters for participants to predict were the deposition profiles and composition, key chemical species and reactions, evolution of suspended material concentrations, and the effects of steam condensation onto aerosols and particle hygroscopicity. The results of the Falcon ISP support the belief that aerosol physics is generally well modelled in primary circuit codes, but the chemistry models in many of the codes need to be improved, since chemical speciation is one of the main factors which controls transport and deposition behaviour. The importance of chemical speciation, aerosol nucleation, and the role of multi-component aerosols in determining transport and deposition behaviour are evident. The role of re-vaporization in these Falcon experiments is not clear; it is not possible to compare those codes which predicted re-vaporization with quantitative data. The evidence from this ISP exercise indicates that the containment codes can predict thermal-hydraulics conditions satisfactorily. However, the differences in the predicted aerosol locations in the Falcon tests had shown that aerosol behaviour was very susceptible to parameters such as particle size distribution
Evolution of ASTEC V1.2 rev.1 code for WWER-1000 reactors/SBO sequence
International Nuclear Information System (INIS)
Georgieva, J.; Stefanova, A.; Groudev, P.; Tusheva, P.; Kalchev, B.; Passalacqua, R.
2006-01-01
In this paper a comparison between calculations of severe accidents occurred from WWER-1000 with ASTEC code specified for an event of full unloading with relief valves stuck opened with no hydroaccumulators intervention is presented. The purpose of the analyses provided is to present the relationship between the improvements of the actual version (ASTEC Vl.2 rev. 1) and ASTEC V1.1 p2 like: code modifications, incoming data improvements. Such discrepancies are to be examined. Case by case suggestions for ASTEC improvements are to be provided
Field-based tests of geochemical modeling codes usign New Zealand hydrothermal systems
International Nuclear Information System (INIS)
Bruton, C.J.; Glassley, W.E.; Bourcier, W.L.
1994-06-01
Hydrothermal systems in the Taupo Volcanic Zone, North Island, New Zealand are being used as field-based modeling exercises for the EQ3/6 geochemical modeling code package. Comparisons of the observed state and evolution of the hydrothermal systems with predictions of fluid-solid equilibria made using geochemical modeling codes will determine how the codes can be used to predict the chemical and mineralogical response of the environment to nuclear waste emplacement. Field-based exercises allow us to test the models on time scales unattainable in the laboratory. Preliminary predictions of mineral assemblages in equilibrium with fluids sampled from wells in the Wairakei and Kawerau geothermal field suggest that affinity-temperature diagrams must be used in conjunction with EQ6 to minimize the effect of uncertainties in thermodynamic and kinetic data on code predictions
ON THE SIMULTANEOUS EVOLUTION OF MASSIVE PROTOSTARS AND THEIR HOST CORES
International Nuclear Information System (INIS)
Kuiper, R.; Yorke, H. W.
2013-01-01
Studies of the evolution of massive protostars and the evolution of their host molecular cloud cores are commonly treated as separate problems. However, interdependencies between the two can be significant. Here, we study the simultaneous evolution of massive protostars and their host molecular cores using a multi-dimensional radiation hydrodynamics code that incorporates the effects of the thermal pressure and radiative acceleration feedback of the centrally forming protostar. The evolution of the massive protostar is computed simultaneously using the stellar evolution code STELLAR, modified to include the effects of variable accretion. The interdependencies are studied in three different collapse scenarios. For comparison, stellar evolutionary tracks at constant accretion rates and the evolution of the host cores using pre-computed stellar evolutionary tracks are computed. The resulting interdependencies of the protostellar evolution and the evolution of the environment are extremely diverse and depend on the order of events, in particular the time of circumstellar accretion disk formation with respect to the onset of the bloating phase of the star. Feedback mechanisms affect the instantaneous accretion rate and the protostar's radius, temperature, and luminosity on timescales t ≤ 5 kyr, corresponding to the accretion timescale and Kelvin-Helmholtz contraction timescale, respectively. Nevertheless, it is possible to approximate the overall protostellar evolution in many cases by pre-computed stellar evolutionary tracks assuming appropriate constant average accretion rates
International Nuclear Information System (INIS)
Chung, S.K.; Hah, C.J.; Lee, H.C.; Kim, Y.H.; Cho, N.Z.
1996-01-01
Modern nodal methods usually employs the transverse integration technique in order to reduce a multi-dimensional diffusion equation to one-dimensional diffusion equations. The use of the transverse integration technique requires two major approximations such as a transverse leakage approximation and a one-dimensional flux approximation. Both the transverse leakage and the one-dimensional flux are approximated by polynomials. ANC (Advanced Nodal Code) developed by Westinghouse employs a modern nodal expansion method for the flux calculation, the equivalence theory for the homogenization error reduction and a group theory for pin power recovery. Unlike the conventional modern nodal methods, AFEN (Analytic Function Expansion Nodal) method expands homogeneous flux distributions within a node into non-separable analytic basis functions, which eliminate two major approximations of the modern nodal methods. A comparison study of AFEN with ANC has been performed to see the applicability of AFEN to commercial PWR and different types of reactors such as MOX fueled reactor. The qualification comparison results demonstrate that AFEN methodology is accurate enough to apply for commercial PWR analysis. The results show that AFEN provides very accurate results (core multiplication factor and assembly power distribution) for cores that exhibit strong flux gradients as in a MOX loaded core. (author)
International Nuclear Information System (INIS)
Rossi, J.
1994-02-01
Probabilistic Consequence Assessment (PCA) methods are exploited not only in risk evaluation but also to study alternative design features, reactor siting recommendations and to obtain acceptable dose criteria by the radiation safety authorities. The models are programmed into computer codes for these kind of assessment. To investigate the quality and competence of different models, OECD/NEA and CEC organized the international code comparison exercise, which was participated by the organizations from 15 countries. There were seven codes participating in the exercise. The objectives of the code comparison exercise were to compare the results by the codes, to contribute to PCA code quality assurance, to harmonize the codes, to provide a forum for discussion on various approaches and to produce the report on the exercise. The project started in 1991 and the results of the calculations were completed in autumn 1992. The international report consists of two parts: the Overview Report for decision makers and the supporting detailed Technical Report. The results of the project are reviewed as an user of the ARANO-programme of VTT and trends of it's further development are indicated in this report. (orig.) (11 refs., 13 figs., 4 tabs.)
DEFF Research Database (Denmark)
Popko, Wojciech; Vorpahl, Fabian; Zuga, Adam
2012-01-01
In this paper, the exemplary results of the IEA Wind Task 30 "Offshore Code Comparison Collaboration Continuation" (OC4) Project - Phase I, focused on the coupled simulation of an offshore wind turbine (OWT) with a jacket support structure, are presented. The focus of this task has been the verif......In this paper, the exemplary results of the IEA Wind Task 30 "Offshore Code Comparison Collaboration Continuation" (OC4) Project - Phase I, focused on the coupled simulation of an offshore wind turbine (OWT) with a jacket support structure, are presented. The focus of this task has been...... the verification of OWT modeling codes through code-to-code comparisons. The discrepancies between the results are shown and the sources of the differences are discussed. The importance of the local dynamics of the structure is depicted in the simulation results. Furthermore, attention is given to aspects...
DEFF Research Database (Denmark)
Robertson, Amy; Jonkman, Jason M.; Vorpahl, Fabian
2014-01-01
Offshore wind turbines are designed and analyzed using comprehensive simulation tools (or codes) that account for the coupled dynamics of the wind inflow, aerodynamics, elasticity, and controls of the turbine, along with the incident waves, sea current, hydrodynamics, mooring dynamics, and founda......Offshore wind turbines are designed and analyzed using comprehensive simulation tools (or codes) that account for the coupled dynamics of the wind inflow, aerodynamics, elasticity, and controls of the turbine, along with the incident waves, sea current, hydrodynamics, mooring dynamics......, and foundation dynamics of the support structure. This paper describes the latest findings of the code-to-code verification activities of the Offshore Code Comparison Collaboration Continuation project, which operates under the International Energy Agency Wind Task 30. In the latest phase of the project......, participants used an assortment of simulation codes to model the coupled dynamic response of a 5-MW wind turbine installed on a floating semisubmersible in 200 m of water. Code predictions were compared from load case simulations selected to test different model features. The comparisons have resulted...
Energy Technology Data Exchange (ETDEWEB)
Winckler, N., E-mail: n.winckler@gsi.de [GSI Helmholtzzentrum für Schwerionenforschung GmbH, 64291 Darmstadt (Germany); Rybalchenko, A. [GSI Helmholtzzentrum für Schwerionenforschung GmbH, 64291 Darmstadt (Germany); Shevelko, V.P. [P.N. Lebedev Physical Institute, 119991 Moscow (Russian Federation); Al-Turany, M. [GSI Helmholtzzentrum für Schwerionenforschung GmbH, 64291 Darmstadt (Germany); CERN, European Organization for Nuclear Research, 1211 Geneve 23 (Switzerland); Kollegger, T. [GSI Helmholtzzentrum für Schwerionenforschung GmbH, 64291 Darmstadt (Germany); Stöhlker, Th. [GSI Helmholtzzentrum für Schwerionenforschung GmbH, 64291 Darmstadt (Germany); Helmholtz-Institute Jena, D-07743 Jena (Germany); Institut für Optik und Quantenelektronik, Friedrich-Schiller-Universität, D-07743 Jena (Germany)
2017-02-01
A detailed description of a recently developed BREIT computer code (Balance Rate Equations of Ion Transportation) for calculating charge-state fractions of ion beams passing through matter is presented. The code is based on the analytical solutions of the differential balance equations for the charge-state fractions as a function of the target thickness and can be used for calculating the ion evolutions in gaseous, solid and plasma targets. The BREIT code is available on-line and requires the charge-changing cross sections and initial conditions in the input file. The eigenvalue decomposition method, applied to obtain the analytical solutions of the rate equations, is described in the paper. Calculations of non-equilibrium and equilibrium charge-state fractions, performed by the BREIT code, are compared with experimental data and results of other codes for ion beams in gaseous and solid targets. Ability and limitations of the BREIT code are discussed in detail.
International Nuclear Information System (INIS)
Butland, A.T.D.; Putney, J.; Sweet, D.W.
1980-04-01
This report describes work performed to compare two UK neutron diffusion theory codes, TIGAR and SNAP, with published results for eight other codes available abroad. Both mesh edge and mesh centred finite difference diffusion theory codes as well as one axial synthesis code are included in the comparison and a range of iteration procedures are used by them. Comparison is made of calculations for a model of the sodium cooled fast reactor SNR-300 in both triangular and rectangular geometry and for a range of spatial meshes, enabling extrapolations to infinite mesh to be made. Calculated values of the effective multiplication constant, keff, for all the codes, agree very well when extrapolated to infinite mesh, indicating that no significant errors arising from the finite difference approximation but independent of mesh spacing are present in the calculations. The variation of keff with mesh area is found to be linear for the small meshes considered here, with the gradients for the mesh centred and mesh edged codes being of opposite sign. The results obtained using the mesh centred codes TIGAR, SNAP and CITATION agree closely with one another for all the meshes considered; the mesh edge codes agree less closely. (author)
Results of aerosol code comparisons with releases from ACE MCCI tests
International Nuclear Information System (INIS)
Fink, J.K.; Corradini, M.; Hidaka, A.; Hontanon, E.; Mignanelli, M.A.; Schroedl, E.; Strizhov, V.
1992-01-01
Results of aerosol release calculations by six groups from six countries are compared with the releases from ACE MCCI Test L6. The codes used for these calculations included: SOLGASMIX-PV, SOLGASMIX Reactor 1986, CORCON.UW, VANESA 1.01, and CORCON mod2.04/VANESA 1.01. Calculations were performed with the standard VANESA 1.01 code and with modifications to the VANESA code such as the inclusion of various zirconium-silica chemical reactions. Comparisons of results from these calculations were made with Test L6 release fractions for U, Zr, Si, the fission-product elements Te, Ba, Sr, Ce, La, Mo and control materials Ag, In, and Ru. Reasonable agreement was obtained between calculations and Test L6 results for the volatile elements Ag, In and Te. Calculated releases of the low volatility fission products ranged from within an order of magnitude to five orders of magnitude of Test L6 values. Releases were over and underestimated by calculations. Poorest agreements were obtained for Mo and Si
ASTEC—the Aarhus STellar Evolution Code
Christensen-Dalsgaard, Jørgen
2008-08-01
The Aarhus code is the result of a long development, starting in 1974, and still ongoing. A novel feature is the integration of the computation of adiabatic oscillations for specified models as part of the code. It offers substantial flexibility in terms of microphysics and has been carefully tested for the computation of solar models. However, considerable development is still required in the treatment of nuclear reactions, diffusion and convective mixing.
Koppenol, Boy; Cheng, Zhengshun; Gao, Zhen; Simao Ferreira, C.; Moan, T; Tande, John Olav Giæver; Kvamsdal, Trond; Muskulus, Michael
2017-01-01
This paper presents a comparison of two state-of-the-art codes that are capable of modelling floating vertical axis wind turbines (VAWTs) in fully coupled time-domain simulations, being the HAWC2 by DTU and the SIMO-RIFLEX-AC code by NTNU/MARINTEK. The comparative study focusses on the way
Last interglacial temperature evolution – a model inter-comparison
Directory of Open Access Journals (Sweden)
P. Bakker
2013-03-01
Full Text Available There is a growing number of proxy-based reconstructions detailing the climatic changes that occurred during the last interglacial period (LIG. This period is of special interest, because large parts of the globe were characterized by a warmer-than-present-day climate, making this period an interesting test bed for climate models in light of projected global warming. However, mainly because synchronizing the different palaeoclimatic records is difficult, there is no consensus on a global picture of LIG temperature changes. Here we present the first model inter-comparison of transient simulations covering the LIG period. By comparing the different simulations, we aim at investigating the common signal in the LIG temperature evolution, investigating the main driving forces behind it and at listing the climate feedbacks which cause the most apparent inter-model differences. The model inter-comparison shows a robust Northern Hemisphere July temperature evolution characterized by a maximum between 130–125 ka BP with temperatures 0.3 to 5.3 K above present day. A Southern Hemisphere July temperature maximum, −1.3 to 2.5 K at around 128 ka BP, is only found when changes in the greenhouse gas concentrations are included. The robustness of simulated January temperatures is large in the Southern Hemisphere and the mid-latitudes of the Northern Hemisphere. For these regions maximum January temperature anomalies of respectively −1 to 1.2 K and −0.8 to 2.1 K are simulated for the period after 121 ka BP. In both hemispheres these temperature maxima are in line with the maximum in local summer insolation. In a number of specific regions, a common temperature evolution is not found amongst the models. We show that this is related to feedbacks within the climate system which largely determine the simulated LIG temperature evolution in these regions. Firstly, in the Arctic region, changes in the summer sea-ice cover control the evolution of LIG winter
International Nuclear Information System (INIS)
Malen, K.; Jansson, L.
1978-08-01
Runs with our present version of GAPCON-THERMAL-2 have been compared to results from the EPRI code comparison study. Usually also our version of GAPCON predicts high temperatures, 100-300 K or 10-15% higher than average code predictions and experimental results. The well-known temperaturegas release instablility is found also with GAPCON. In this case one identifies the gas release limits 1400 deg C and 1700 deg C as instablility points. (author)
Comparisons of the simulation results using different codes for ADS spallation target
International Nuclear Information System (INIS)
Yu Hongwei; Fan Sheng; Shen Qingbiao; Zhao Zhixiang; Wan Junsheng
2002-01-01
The calculations to the standard thick target were made by using different codes. The simulation of the thick Pb target with length of 60 cm, diameter of 20 cm bombarded with 800, 1000, 1500 and 2000 MeV energetic proton beam was carried out. The yields and the spectra of emitted neutron were studied. The spallation target was simulated by SNSP, SHIELD, DCM/CEM (Dubna Cascade Model /Cascade Evaporation Mode) and LAHET codes. The Simulation Results were compared with experiments. The comparisons show good agreement between the experiments and the SNSP simulated leakage neutron yield. The SHIELD simulated leakage neutron spectra are in good agreement with the LAHET and the DCM/CEM simulated leakage neutron spectra
Munasinghe, A; Chang, D; Mamidanna, R; Middleton, S; Joy, M; Penninckx, F; Darzi, A; Livingston, E; Faiz, O
2014-07-01
Significant variation in colorectal surgery outcomes exists between different countries. Better understanding of the sources of variable outcomes using administrative data requires alignment of differing clinical coding systems. We aimed to map similar diagnoses and procedures across administrative coding systems used in different countries. Administrative data were collected in a central database as part of the Global Comparators (GC) Project. In order to unify these data, a systematic translation of diagnostic and procedural codes was undertaken. Codes for colorectal diagnoses, resections, operative complications and reoperative interventions were mapped across the respective national healthcare administrative coding systems. Discharge data from January 2006 to June 2011 for patients who had undergone colorectal surgical resections were analysed to generate risk-adjusted models for mortality, length of stay, readmissions and reoperations. In all, 52 544 case records were collated from 31 institutions in five countries. Mapping of all the coding systems was achieved so that diagnosis and procedures from the participant countries could be compared. Using the aligned coding systems to develop risk-adjusted models, the 30-day mortality rate for colorectal surgery was 3.95% (95% CI 0.86-7.54), the 30-day readmission rate was 11.05% (5.67-17.61), the 28-day reoperation rate was 6.13% (3.68-9.66) and the mean length of stay was 14 (7.65-46.76) days. The linkage of international hospital administrative data that we developed enabled comparison of documented surgical outcomes between countries. This methodology may facilitate international benchmarking. Colorectal Disease © 2014 The Association of Coloproctology of Great Britain and Ireland.
Reactor Simulations for Safeguards with the MCNP Utility for Reactor Evolution Code
International Nuclear Information System (INIS)
Shiba, T.; Fallot, M.
2015-01-01
To tackle nuclear material proliferation, we conducted several proliferation scenarios using the MURE (MCNP Utility for Reactor Evolution) code. The MURE code, developed by CNRS laboratories, is a precision, open-source code written in C++ that automates the preparation and computation of successive MCNP (Monte Carlo N-Particle) calculations and solves the Bateman equations in between, for burnup or thermal-hydraulics purposes. In addition, MURE has been completed recently with a module for the CHaracterization of Radioactive Sources, called CHARS, which computes the emitted gamma, beta and alpha rays associated to any fuel composition. Reactor simulations could allow knowing how plutonium or other material generation evolves inside reactors in terms of time and amount. The MURE code is appropriate for this purpose and can also provide knowledge on associated particle emissions. Using MURE, we have both developed a cell simulation of a typical CANDU reactor and a detailed model of light water PWR core, which could be used to analyze the composition of fuel assemblies as a function of time or burnup. MURE is also able to provide, thanks to its extension MURE-CHARTS, the emitted gamma rays from fuel assemblies unloaded from the core at any burnup. Diversion cases of Generation IV reactors have been also developed; a design of Very High Temperature Reactor (a Pebble Bed Reactor (PBR), loaded with UOx, PuOx and ThUOx fuels), and a Na-cooled Fast Breeder Reactor (FBR) (with depleted Uranium or Minor Actinides in the blanket). The loading of Protected Plutonium Production (P3) in the FBR was simulated. The simulations of various reactor designs taking into account reactor physics constraints may bring valuable information to inspectors. At this symposium, we propose to show the results of these reactor simulations as examples of the potentiality of reactor simulations for safeguards. (author)
Dual Coding, Reasoning and Fallacies.
Hample, Dale
1982-01-01
Develops the theory that a fallacy is not a comparison of a rhetorical text to a set of definitions but a comparison of one person's cognition with another's. Reviews Paivio's dual coding theory, relates nonverbal coding to reasoning processes, and generates a limited fallacy theory based on dual coding theory. (PD)
International Nuclear Information System (INIS)
Dershowitz, W; Herbert, A.; Long, J.
1989-03-01
The hydrology of the SCV site will be modelled utilizing discrete fracture flow models. These models are complex, and can not be fully cerified by comparison to analytical solutions. The best approach for verification of these codes is therefore cross-verification between different codes. This is complicated by the variation in assumptions and solution techniques utilized in different codes. Cross-verification procedures are defined which allow comparison of the codes developed by Harwell Laboratory, Lawrence Berkeley Laboratory, and Golder Associates Inc. Six cross-verification datasets are defined for deterministic and stochastic verification of geometric and flow features of the codes. Additional datasets for verification of transport features will be documented in a future report. (13 figs., 7 tabs., 10 refs.) (authors)
Winckler, N; Shevelko, V P; Al-Turany, M; Kollegger, T; Stöhlker, Th
2017-01-01
A detailed description of a recently developed BREIT computer code (Balance Rate Equations of Ion Transportation) for calculating charge-state fractions of ion beams passing through matter is presented. The code is based on the analytical solutions of the differential balance equations for the charge-state fractions as a function of the target thickness and can be used for calculating the ion evolutions in gaseous, solid and plasma targets. The BREIT code is available on-line and requires the charge-changing cross sections and initial conditions in the input file. The eigenvalue decomposition method, applied to obtain the analytical solutions of the rate equations, is described in the paper. Calculations of non-equilibrium and equilibrium charge-state fractions, performed by the BREIT code, are compared with experimental data and results of other codes for ion beams in gaseous and solid targets. Ability and limitations of the BREIT code are discussed in detail.
Insights into hominid evolution from the gorilla genome sequence
Scally, Aylwyn; Dutheil, Julien Y.; Hillier, LaDeana W.; Jordan, Greg E.; Goodhead, Ian; Herrero, Javier; Hobolth, Asger; Lappalainen, Tuuli; Mailund, Thomas; Marques-Bonet, Tomas; McCarthy, Shane; Montgomery, Stephen H.; Schwalie, Petra C.; Tang, Y. Amy; Ward, Michelle C.; Xue, Yali; Yngvadottir, Bryndis; Alkan, Can; Andersen, Lars N.; Ayub, Qasim; Ball, Edward V.; Beal, Kathryn; Bradley, Brenda J.; Chen, Yuan; Clee, Chris M.; Fitzgerald, Stephen; Graves, Tina A.; Gu, Yong; Heath, Paul; Heger, Andreas; Karakoc, Emre; Kolb-Kokocinski, Anja; Laird, Gavin K.; Lunter, Gerton; Meader, Stephen; Mort, Matthew; Mullikin, James C.; Munch, Kasper; O’Connor, Timothy D.; Phillips, Andrew D.; Prado-Martinez, Javier; Rogers, Anthony S.; Sajjadian, Saba; Schmidt, Dominic; Shaw, Katy; Simpson, Jared T.; Stenson, Peter D.; Turner, Daniel J.; Vigilant, Linda; Vilella, Albert J.; Whitener, Weldon; Zhu, Baoli; Cooper, David N.; de Jong, Pieter; Dermitzakis, Emmanouil T.; Eichler, Evan E.; Flicek, Paul; Goldman, Nick; Mundy, Nicholas I.; Ning, Zemin; Odom, Duncan T.; Ponting, Chris P.; Quail, Michael A.; Ryder, Oliver A.; Searle, Stephen M.; Warren, Wesley C.; Wilson, Richard K.; Schierup, Mikkel H.; Rogers, Jane; Tyler-Smith, Chris; Durbin, Richard
2012-01-01
Summary Gorillas are humans’ closest living relatives after chimpanzees, and are of comparable importance for the study of human origins and evolution. Here we present the assembly and analysis of a genome sequence for the western lowland gorilla, and compare the whole genomes of all extant great ape genera. We propose a synthesis of genetic and fossil evidence consistent with placing the human-chimpanzee and human-chimpanzee-gorilla speciation events at approximately 6 and 10 million years ago (Mya). In 30% of the genome, gorilla is closer to human or chimpanzee than the latter are to each other; this is rarer around coding genes, indicating pervasive selection throughout great ape evolution, and has functional consequences in gene expression. A comparison of protein coding genes reveals approximately 500 genes showing accelerated evolution on each of the gorilla, human and chimpanzee lineages, and evidence for parallel acceleration, particularly of genes involved in hearing. We also compare the western and eastern gorilla species, estimating an average sequence divergence time 1.75 million years ago, but with evidence for more recent genetic exchange and a population bottleneck in the eastern species. The use of the genome sequence in these and future analyses will promote a deeper understanding of great ape biology and evolution. PMID:22398555
Comparison of ATF and TJ-II stellarator equilibria as computed by the 3-D VMEC and PIES codes
International Nuclear Information System (INIS)
Johnson, J.L.; Monticello, D.A.; Reiman, A.H.; Hirshman, S.P.
1992-01-01
A comparison is made of results from the PIES code, which determines the equilibrium properties of three-dimensional toroidal configurations by direct integration along the magnetic field lines, with those from the VMEC code, which uses an energy minimization in a flux representation to determine the equilibrium configuration, for two devices: the ATF stellarator at Oak Ridge and the TJ-11 heliac which is being built in Madrid. The results obtained from the two codes are in good agreement, providing additional validation for the codes
A Comparison of Source Code Plagiarism Detection Engines
Lancaster, Thomas; Culwin, Fintan
2004-06-01
Automated techniques for finding plagiarism in student source code submissions have been in use for over 20 years and there are many available engines and services. This paper reviews the literature on the major modern detection engines, providing a comparison of them based upon the metrics and techniques they deploy. Generally the most common and effective techniques are seen to involve tokenising student submissions then searching pairs of submissions for long common substrings, an example of what is defined to be a paired structural metric. Computing academics are recommended to use one of the two Web-based detection engines, MOSS and JPlag. It is shown that whilst detection is well established there are still places where further research would be useful, particularly where visual support of the investigation process is possible.
The application of the TRAC-PD2 code in the CANON experiment
International Nuclear Information System (INIS)
Neves Conti, T. das; Freitas, R.L.
1991-09-01
The TRAC code (Transient Reactor Analysis Code), developed in the Los Alamos National Laboratory, is used to accident analysis in light water reactor. The TRAC-PD2 version, used in this paper, has a refined dynamic flow model for two fluids, which is based on the conservation equations of mass, momentum and energy for liquid and vapor, allowing then a mechanical and thermal unbalance between phases. This paper presents a comparison of the TRAC-PD2 code with the CANON experiment, which simulates a Loss of Coolant Accident (LOCA) by depressurizing a horizontal tube filled with water at different temperatures. The experiment consists in a instantaneous rupture in one of the tube's edge, taking measures of pressure and void fraction during the transient. The TRAC-PD2 code results are in a good agreement with the pressure and void fraction evolution obtained in the CANON experiment. (author)
Comparison of aerosol behavior codes with experimental results from a sodium fire in a containment
International Nuclear Information System (INIS)
Lhiaubet, G.; Kissane, M.P.; Seino, H.; Miyake, O.; Himeno, Y.
1990-01-01
The containment expert group (CONT), a subgroup of the CEC fast reactor Safety Working Group (SWG), has carried out several studies on the behavior of sodium aerosols which might form in a severe fast reactor accident during which primary sodium leaks into the secondary containment. These studies comprise an intercalibration of measurement devices used to determine the aerosol particle size spectrum, and the analysis and comparison of codes applied to the determination of aerosol behavior in a reactor containment. The paper outlines the results of measurements of typical data made for aerosols produced in a sodium fire and their comparison with results from different codes (PARDISEKO, AEROSIM, CONTAIN, AEROSOLS/B2). The sodium fire experiment took place at CEN-Cadarache (France) in a 400 m 3 vessel. The fire lasted 90 minutes and the aerosol measurements were made over 10 hours at different locations inside the vessel. The results showed that the suspended mass calculated along the time with different codes was in good agreement with the experiment. However, the calculated aerosol deposition on the walls was diverging and always significantly lower than the measured values
Donnelly, Lisa A.
2007-12-01
Previous research has documented students' conceptual difficulties learning evolution and how student learning may be related to students' views of evolution and science. This mixed methods study addressed how 74 high school biology students from six Indiana high schools viewed their evolution learning experiences, the demarcations of science from non-science, and evolution understanding and acceptance. Data collection entailed qualitative and quantitative methods including interviews, classroom observations, surveys, and assessments to address students' views of science and non-science, evolution learning experiences, and understanding and acceptance of evolution. Qualitative coding generated several demarcation and evolution learning experience codes that were subsequently used in quantitative comparisons of evolution understanding and acceptance. The majority of students viewed science as empirical, tentative but ultimately leading to certain truth, compatible with religion, the product of experimental work, and the product of human creativity. None of the students offered the consensus NOS view that scientific theories are substantiated explanations of phenomena while scientific laws state relationships or patterns between phenomena. About half the students indicated that scientific knowledge was subjectively and socio-culturally influenced. The majority of students also indicated that they had positive evolution learning experiences and thought evolution should be taught in secondary school. The quantitative comparisons revealed how students who viewed scientific knowledge as subjectively and socio-culturally influenced had higher understanding than their peers. Furthermore, students who maintained that science and religion were compatible did not differ with respect to understanding but had higher acceptance than their peers who viewed science and religion as conflicting. Furthermore, students who maintained that science must be consistent with their
The Genomic Code: Genome Evolution and Potential Applications
Bernardi, Giorgio
2016-01-25
The genome of metazoans is organized according to a genomic code which comprises three laws: 1) Compositional correlations hold between contiguous coding and non-coding sequences, as well as among the three codon positions of protein-coding genes; these correlations are the consequence of the fact that the genomes under consideration consist of fairly homogeneous, long (≥200Kb) sequences, the isochores; 2) Although isochores are defined on the basis of purely compositional properties, GC levels of isochores are correlated with all tested structural and functional properties of the genome; 3) GC levels of isochores are correlated with chromosome architecture from interphase to metaphase; in the case of interphase the correlation concerns isochores and the three-dimensional “topological associated domains” (TADs); in the case of mitotic chromosomes, the correlation concerns isochores and chromosomal bands. Finally, the genomic code is the fourth and last pillar of molecular biology, the first three pillars being 1) the double helix structure of DNA; 2) the regulation of gene expression in prokaryotes; and 3) the genetic code.
Wu, Menglong; Han, Dahai; Zhang, Xiang; Zhang, Feng; Zhang, Min; Yue, Guangxin
2014-03-10
We have implemented a modified Low-Density Parity-Check (LDPC) codec algorithm in ultraviolet (UV) communication system. Simulations are conducted with measured parameters to evaluate the LDPC-based UV system performance. Moreover, LDPC (960, 480) and RS (18, 10) are implemented and experimented via a non-line-of-sight (NLOS) UV test bed. The experimental results are in agreement with the simulation and suggest that based on the given power and 10(-3)bit error rate (BER), in comparison with an uncoded system, average communication distance increases 32% with RS code, while 78% with LDPC code.
CVSscan : Visualization of Code Evolution
Voinea, Lucian; Telea, Alex; Wijk, Jarke J. van
2005-01-01
During the life cycle of a software system, the source code is changed many times. We study how developers can be enabled to get insight in these changes, in order to understand the status, history and structure better, as well as for instance the roles played by various contributors. We present
A Comparison of Grid-based and SPH Binary Mass-transfer and Merger Simulations
Energy Technology Data Exchange (ETDEWEB)
Motl, Patrick M. [Indiana University Kokomo, School of Sciences, P.O. Box 9003, Kokomo, IN 46903-9004 (United States); Frank, Juhan; Clayton, Geoffrey C.; Tohline, Joel E. [Louisiana State University, Department of Physics and Astronomy, 202 Nicholson Hall, Baton Rouge, LA 70803-4001 (United States); Staff, Jan [College of Science and Math, University of Virgin Islands, St. Thomas, United States Virgin Islands 00802 (United States); Fryer, Christopher L.; Even, Wesley [Center for Theoretical Astrophysics/CCS-2, Los Alamos National Laboratory, P.O. Box 1663, Los Alamos, NM 87545 (United States); Diehl, Steven, E-mail: pmotl@iuk.edu [TLT-Turbo GmbH, Gleiwitzstrasse 7, 66482 Zweibrücken (Germany)
2017-04-01
There is currently a great amount of interest in the outcomes and astrophysical implications of mergers of double degenerate binaries. In a commonly adopted approximation, the components of such binaries are represented by polytropes with an index of n = 3/2. We present detailed comparisons of stellar mass-transfer and merger simulations of polytropic binaries that have been carried out using two very different numerical algorithms—a finite-volume “grid” code and a smoothed-particle hydrodynamics (SPH) code. We find that there is agreement in both the ultimate outcomes of the evolutions and the intermediate stages if the initial conditions for each code are chosen to match as closely as possible. We find that even with closely matching initial setups, the time it takes to reach a concordant evolution differs between the two codes because the initial depth of contact cannot be matched exactly. There is a general tendency for SPH to yield higher mass transfer rates and faster evolution to the final outcome. We also present comparisons of simulations calculated from two different energy equations: in one series, we assume a polytropic equation of state and in the other series an ideal gas equation of state. In the latter series of simulations, an atmosphere forms around the accretor, which can exchange angular momentum and cause a more rapid loss of orbital angular momentum. In the simulations presented here, the effect of the ideal equation of state is to de-stabilize the binary in both SPH and grid simulations, but the effect is more pronounced in the grid code.
International Nuclear Information System (INIS)
BEEBE - WANG, J.; LUCCIO, A.U.; D IMPERIO, N.; MACHIDA, S.
2002-01-01
Space charge in high intensity beams is an important issue in accelerator physics. Due to the complicity of the problems, the most effective way of investigating its effect is by computer simulations. In the resent years, many space charge simulation methods have been developed and incorporated in various 2D or 3D multi-particle-tracking codes. It has becoming necessary to benchmark these methods against each other, and against experimental results. As a part of global effort, we present our initial comparison of the space charge methods incorporated in simulation codes ORBIT++, ORBIT and SIMPSONS. In this paper, the methods included in these codes are overviewed. The simulation results are presented and compared. Finally, from this study, the advantages and disadvantages of each method are discussed
Energy Technology Data Exchange (ETDEWEB)
BEEBE - WANG,J.; LUCCIO,A.U.; D IMPERIO,N.; MACHIDA,S.
2002-06-03
Space charge in high intensity beams is an important issue in accelerator physics. Due to the complicity of the problems, the most effective way of investigating its effect is by computer simulations. In the resent years, many space charge simulation methods have been developed and incorporated in various 2D or 3D multi-particle-tracking codes. It has becoming necessary to benchmark these methods against each other, and against experimental results. As a part of global effort, we present our initial comparison of the space charge methods incorporated in simulation codes ORBIT++, ORBIT and SIMPSONS. In this paper, the methods included in these codes are overviewed. The simulation results are presented and compared. Finally, from this study, the advantages and disadvantages of each method are discussed.
Comparison of two LES codes for wind turbine wake studies
International Nuclear Information System (INIS)
Sarlak, H; Mikkelsen, R; Sørensen, J N; Pierella, F
2014-01-01
For the third time a blind test comparison in Norway 2013, was conducted comparing numerical simulations for the rotor C p and C t and wake profiles with the experimental results. As the only large eddy simulation study among participants, results of the Technical University of Denmark (DTU) using their in-house CFD solver, EllipSys3D, proved to be more reliable among the other models for capturing the wake profiles and the turbulence intensities downstream the turbine. It was therefore remarked in the workshop to investigate other LES codes to compare their performance with EllipSys3D. The aim of this paper is to investigate on two CFD solvers, the DTU's in-house code, EllipSys3D and the open-sourse toolbox, OpenFoam, for a set of actuator line based LES computations. Two types of simulations are performed: the wake behind a signle rotor and the wake behind a cluster of three inline rotors. Results are compared in terms of velocity deficit, turbulence kinetic energy and eddy viscosity. It is seen that both codes predict similar near-wake flow structures with the exception of OpenFoam's simulations without the subgrid-scale model. The differences begin to increase with increasing the distance from the upstream rotor. From the single rotor simulations, EllipSys3D is found to predict a slower wake recovery in the case of uniform laminar flow. From the 3-rotor computations, it is seen that the difference between the codes is smaller as the disturbance created by the downstream rotors causes break down of the wake structures and more homogenuous flow structures. It is finally observed that OpenFoam computations are more sensitive to the SGS models
Energy Technology Data Exchange (ETDEWEB)
Freeman, L.N.; Wilson, R.E. [Oregon State Univ., Dept. of Mechanical Engineering, Corvallis, OR (United States)
1996-09-01
The FAST Code which is capable of determining structural loads on a flexible, teetering, horizontal axis wind turbine is described and comparisons of calculated loads with test data are given at two wind speeds for the ESI-80. The FAST Code models a two-bladed HAWT with degrees of freedom for blade bending, teeter, drive train flexibility, yaw, and windwise and crosswind tower motion. The code allows blade dimensions, stiffnesses, and weights to differ and models tower shadow, wind shear, and turbulence. Additionally, dynamic stall is included as are delta-3 and an underslung rotor. Load comparisons are made with ESI-80 test data in the form of power spectral density, rainflow counting, occurrence histograms, and azimuth averaged bin plots. It is concluded that agreement between the FAST Code and test results is good. (au)
German nuclear codes revised: comparison with approaches used in other countries
International Nuclear Information System (INIS)
Raetzke, C.; Micklinghoff, M.
2005-01-01
The article deals with the plan of the German Federal Ministry for the Environment (BMU) to revise the German set of nuclear codes, and draws a comparison with approaches pursued in other countries in formulating and implementing new requirements imposed upon existing plants. A striking feature of the BMU project is the intention to have the codes reflect the state of the art in an entirely abstract way irrespective of existing plants. This implies new requirements imposed on plant design, among other things. However, the state authorities, which establish the licensing conditions for individual plants in concrete terms, will not be able to apply these new codes for legal reasons (protection of vested rights) to the extent in which they incorporate changes in safety philosophy. Also the procedure adopted has raised considerable concern. The processing time of two years is inordinately short, and participation of the public and of industry does not go beyond the strictly formal framework of general public participation. In the light of this absence of quality assurance, it would be surprising if this new set of codes did not suffer from considerable deficits in its contents. Other countries show that the BMU is embarking on an isolated approach in every respect. Elsewhere, backfitting requirements are developed carefully and over long periods of time; they are discussed in detail with the operators; costs and benefits are weighted, and the consequences are evaluated. These elements are in common to procedures in all countries, irrespective of very different steps in detail. (orig.)
Code Glosses in Academic Writing: The Comparison of Iranian and Native Authors
Directory of Open Access Journals (Sweden)
Mahdi Dehghan
2016-01-01
Full Text Available One of the challenges of academic writing is the creation of a structurally and communicatively well-organized and coherent text. Metadiscourse enables authors of journal articles to achieve this goal by raising the writers‘ awareness about discourse features which can contribute to a better academic content production. Also, L1 background has always been a hot topic in applied linguistics and native versus non-native comparisons have been of particular interest in this field. The purpose of this study was to see whether native English speakers and Iranians use code glosses as a sub-category of metadiscourse similarly in their academic writings. To this end, the introduction section of 30 journal articles written by native and Iranian non-native English authors were investigated and the number of code-glosses in each group was counted and analyzed. Both descriptive and inferential statistics were used to answer the research question of this study. The result of data analysis revealed that there was no significant difference between the frequency count of code glosses used by Iranian and native English authors. This study can have pedagogical implications for EAP course designers as well as academic writing instructors and students.
Grenier, Christophe; Roux, Nicolas; Anbergen, Hauke; Collier, Nathaniel; Costard, Francois; Ferrry, Michel; Frampton, Andrew; Frederick, Jennifer; Holmen, Johan; Jost, Anne; Kokh, Samuel; Kurylyk, Barret; McKenzie, Jeffrey; Molson, John; Orgogozo, Laurent; Rivière, Agnès; Rühaak, Wolfram; Selroos, Jan-Olof; Therrien, René; Vidstrand, Patrik
2015-04-01
The impacts of climate change in boreal regions has received considerable attention recently due to the warming trends that have been experienced in recent decades and are expected to intensify in the future. Large portions of these regions, corresponding to permafrost areas, are covered by water bodies (lakes, rivers) that interact with the surrounding permafrost. For example, the thermal state of the surrounding soil influences the energy and water budget of the surface water bodies. Also, these water bodies generate taliks (unfrozen zones below) that disturb the thermal regimes of permafrost and may play a key role in the context of climate change. Recent field studies and modeling exercises indicate that a fully coupled 2D or 3D Thermo-Hydraulic (TH) approach is required to understand and model the past and future evolution of landscapes, rivers, lakes and associated groundwater systems in a changing climate. However, there is presently a paucity of 3D numerical studies of permafrost thaw and associated hydrological changes, and the lack of study can be partly attributed to the difficulty in verifying multi-dimensional results produced by numerical models. Numerical approaches can only be validated against analytical solutions for a purely thermic 1D equation with phase change (e.g. Neumann, Lunardini). When it comes to the coupled TH system (coupling two highly non-linear equations), the only possible approach is to compare the results from different codes to provided test cases and/or to have controlled experiments for validation. Such inter-code comparisons can propel discussions to try to improve code performances. A benchmark exercise was initialized in 2014 with a kick-off meeting in Paris in November. Participants from USA, Canada, Germany, Sweden and France convened, representing altogether 13 simulation codes. The benchmark exercises consist of several test cases inspired by existing literature (e.g. McKenzie et al., 2007) as well as new ones. They
Understanding Collateral Evolution in Linux Device Drivers
DEFF Research Database (Denmark)
Padioleau, Yoann; Lawall, Julia Laetitia; Muller, Gilles
2006-01-01
no tools to help in this process, collateral evolution is thus time consuming and error prone.In this paper, we present a qualitative and quantitative assessment of collateral evolution in Linux device driver code. We provide a taxonomy of evolutions and collateral evolutions, and use an automated patch......-analysis tool that we have developed to measure the number of evolutions and collateral evolutions that affect device drivers between Linux versions 2.2 and 2.6. In particular, we find that from one version of Linux to the next, collateral evolutions can account for up to 35% of the lines modified in such code....
Codon size reduction as the origin of the triplet genetic code.
Directory of Open Access Journals (Sweden)
Pavel V Baranov
Full Text Available The genetic code appears to be optimized in its robustness to missense errors and frameshift errors. In addition, the genetic code is near-optimal in terms of its ability to carry information in addition to the sequences of encoded proteins. As evolution has no foresight, optimality of the modern genetic code suggests that it evolved from less optimal code variants. The length of codons in the genetic code is also optimal, as three is the minimal nucleotide combination that can encode the twenty standard amino acids. The apparent impossibility of transitions between codon sizes in a discontinuous manner during evolution has resulted in an unbending view that the genetic code was always triplet. Yet, recent experimental evidence on quadruplet decoding, as well as the discovery of organisms with ambiguous and dual decoding, suggest that the possibility of the evolution of triplet decoding from living systems with non-triplet decoding merits reconsideration and further exploration. To explore this possibility we designed a mathematical model of the evolution of primitive digital coding systems which can decode nucleotide sequences into protein sequences. These coding systems can evolve their nucleotide sequences via genetic events of Darwinian evolution, such as point-mutations. The replication rates of such coding systems depend on the accuracy of the generated protein sequences. Computer simulations based on our model show that decoding systems with codons of length greater than three spontaneously evolve into predominantly triplet decoding systems. Our findings suggest a plausible scenario for the evolution of the triplet genetic code in a continuous manner. This scenario suggests an explanation of how protein synthesis could be accomplished by means of long RNA-RNA interactions prior to the emergence of the complex decoding machinery, such as the ribosome, that is required for stabilization and discrimination of otherwise weak triplet codon
Fast code for Monte Carlo simulations
International Nuclear Information System (INIS)
Oliveira, P.M.C. de; Penna, T.J.P.
1988-01-01
A computer code to generate the dynamic evolution of the Ising model on a square lattice, following the Metropolis algorithm is presented. The computer time consumption is reduced by a factor of 8 when one compares our code with traditional multiple spin codes. The memory allocation size is also reduced by a factor of 4. The code is easily generalizable for other lattices and models. (author) [pt
Kim, Sun Young; Nehm, Ross H.
2011-01-01
Despite a few international comparisons of the evolutionary beliefs of the general public, comparatively less research has focused on science teachers. Cross-cultural studies offer profitable opportunities for exploring the interactions among knowledge and belief variables in regard to evolution in different socio-cultural contexts. We investigated the evolutionary worldviews of pre-service science teachers from Asia (specifically South Korea), a region often excluded from international comparisons. We compared Korean and American science teachers': (1) understandings of evolution and the nature of science, and (2) acceptance of evolution in order to elucidate how knowledge and belief relationships are manifested in different cultural contexts. We found that Korean science teachers exhibited 'moderate' evolutionary acceptance levels comparable to or lower than American science teacher samples. Gender was significantly related to Korean teachers' evolution content knowledge and acceptance of evolution, with female Christian biology teachers displaying the lowest values on all measures. Korean science teachers' understandings of nature of science were significantly related to their acceptance and understanding of evolution; this relationship appears to transcend cultural boundaries. Our new data on Korean teachers, combined with studies from more than 20 other nations, expose the global nature of science teacher ambivalence or antipathy toward evolutionary knowledge.
Directory of Open Access Journals (Sweden)
Jin-Hua Xiao
Full Text Available Among the Chalcidoids, hymenopteran parasitic wasps that have diversified lifestyles, a partial mitochondrial genome has been reported only from Nasonia. This genome had many unusual features, especially a dramatic reorganization and a high rate of evolution. Comparisons based on more mitochondrial genomic data from the same superfamily were required to reveal weather these unusual features are peculiar to Nasonia or not. In the present study, we sequenced the nearly complete mitochondrial genomes from the species Philotrypesis. pilosa and Philotrypesis sp., both of which were associated with Ficus hispida. The acquired data included all of the protein-coding genes, rRNAs, and most of the tRNAs, and in P. pilosa the control region. High levels of nucleotide divergence separated the two species. A comparison of all available hymenopteran mitochondrial genomes (including a submitted partial genome from Ceratosolen solmsi revealed that the Chalcidoids had dramatic mitochondrial gene rearrangments, involved not only the tRNAs, but also several protein-coding genes. The AT-rich control region was translocated and inverted in Philotrypesis. The mitochondrial genomes also exhibited rapid rates of evolution involving elevated nonsynonymous mutations.
International Nuclear Information System (INIS)
Bandini, Giacomino; Ederli, Stefano; Perez-Martin, Sara; Pfrang, Werner; Girault, Nathalie; Cloarec, Laure
2017-01-01
The ASTEC-Na code was further developed and assessed in the frame of JASMIN project of the 7th EU Framework Program to extend the original capability of ASTEC, dealing with severe accident analysis in LWR to Sodium-cooled Fast Reactors (SFR). The in-pile BE+3 experiment from the SCARABEE-N program has been simulated with ASTEC-Na for thermal-hydraulic models validation purpose. The adequacy of ASTEC-Na thermal-hydraulic models has been also investigated through the comparison with other safety analysis codes. The analysis of SCARABEE BE+3 test confirms the good performance of ASTEC-Na code in the calculation of single-phase conditions and boiling onset, while larger deviations are encountered in the analysis of the two-phase conditions, mainly regarding the propagation of the boiling front. Furthermore, reasonable agreement was found with other code results. (author)
International Nuclear Information System (INIS)
Pudewills, A.
2005-11-01
Construction of deep underground structures disturbs the initial stress field in the surrounding rock. This effect can generate microcracks and alter the hydromechanical properties of the rock salt around the excavations. For the long-term performance of an underground repository in rock salt, the evolution of the 'Excavation Disturbed Zone' (EDZ) and the hydromechanical behaviour of this zone represent important issues with respect to the integrity of the geological and technical barriers. Within the framework of the NF-PRO project, WP 4.4, attention focuses on the mathematical modelling of the development and evolution of the EDZ in the rock near a disposal drift due to its relevance on the integrity of the geological and technical barriers. To perform this task, finite-element codes containing a set of time- and temperature-dependent constitutive models have been improved. A new viscoplastic constitutive model for rock salt that can describe the damage of the rock has been implemented in the finite-element codes available. The model parameters were evaluated based on experimental results. Additionally, the long-term evolution of the EDZ around a gallery in a salt mine at about 700 m below the surface was analysed and the numerical results were compared with in-situ measurements. The calculated room closure, stress distribution and the increase of rock permeability in the EDZ were compared with in-situ data, thus providing confidence in the model used. (orig.)
Comparison of many bodied and binary collision cascade models up to 1 keV
International Nuclear Information System (INIS)
Schwartz, D.M.; Schiffgens, J.D.; Doran, D.G.; Odette, G.R.; Ariyasu, R.G.
1976-01-01
A quasi-dynamical code ADDES has been developed to model displacement cascades in copper for primary knockon atom energies up to several keV. ADDES is like a dynamical code in that it employs a many body treatment, yet similar to a binary collision code in that it incorporates the basic assumption that energy transfers below several eV can be ignored in describing cascade evolution. This paper is primarily concerned with (1) a continuing effort to validate the assumptions and specific parameters in the code by the comparison of ADDES results with experiment and with results from a dynamical code, and (2) comparisons of ADDES results with those from a binary collision code. The directional dependence of the displacement threshold is in reasonable agreement with the measurements of Jung et al. The behavior of focused replacement sequences is very similar to that obtained with the dynamical codes GRAPE and COMENT. Qualitative agreement was found between ADDES and COMENT for a higher energy (500 eV) defocused event while differences, still under study, are apparent in a 250 eV high index event. Comparisons of ADDES with the binary collision code MARLOWE show surprisingly good agreement in the 250 to 1000 eV range for both number and separation of Frenkel pairs. A preliminary observation, perhaps significant to displacement calculations utilizing the concept of a mean displacement energy, is the dissipation of 300 to 400 eV in a replacement sequence producing a single interstitial
Analysis of Non-binary Hybrid LDPC Codes
Sassatelli, Lucile; Declercq, David
2008-01-01
In this paper, we analyse asymptotically a new class of LDPC codes called Non-binary Hybrid LDPC codes, which has been recently introduced. We use density evolution techniques to derive a stability condition for hybrid LDPC codes, and prove their threshold behavior. We study this stability condition to conclude on asymptotic advantages of hybrid LDPC codes compared to their non-hybrid counterparts.
Whitaker, Roger M.; Colombo, Gualtiero B.; Allen, Stuart M.; Dunbar, Robin I. M.
2016-08-01
Cooperation is a fundamental human trait but our understanding of how it functions remains incomplete. Indirect reciprocity is a particular case in point, where one-shot donations are made to unrelated beneficiaries without any guarantee of payback. Existing insights are largely from two independent perspectives: i) individual-level cognitive behaviour in decision making, and ii) identification of conditions that favour evolution of cooperation. We identify a fundamental connection between these two areas by examining social comparison as a means through which indirect reciprocity can evolve. Social comparison is well established as an inherent human disposition through which humans navigate the social world by self-referential evaluation of others. Donating to those that are at least as reputable as oneself emerges as a dominant heuristic, which represents aspirational homophily. This heuristic is found to be implicitly present in the current knowledge of conditions that favour indirect reciprocity. The effective social norms for updating reputation are also observed to support this heuristic. We hypothesise that the cognitive challenge associated with social comparison has contributed to cerebral expansion and the disproportionate human brain size, consistent with the social complexity hypothesis. The findings have relevance for the evolution of autonomous systems that are characterised by one-shot interactions.
International Nuclear Information System (INIS)
2012-08-01
Activities within the frame of the IAEA's Technical Working Group on Advanced Technologies for HWRs (TWG-HWR) are conducted in a project within the IAEA's subprogramme on nuclear power reactor technology development. The objective of the activities on HWRs is to foster, within the frame of the TWG-HWR, information exchange and cooperative research on technology development for current and future HWRs, with an emphasis on safety, economics and fuel resource sustainability. One of the activities recommended by the TWG-HWR was an international standard problem exercise entitled Intercomparison and Validation of Computer Codes for Thermalhydraulics Safety Analyses. Intercomparison and validation of computer codes used in different countries for thermalhydraulics safety analyses will enhance the confidence in the predictions made by these codes. However, the intercomparison and validation exercise needs a set of reliable experimental data. Two RD-14M small break loss of coolant accident (SBLOCA) tests, simulating HWR LOCA behaviour, conducted by Atomic Energy of Canada Ltd (AECL), were selected for this validation project. This report provides a comparison of the results obtained from eight participating organizations from six countries (Argentina, Canada, China, India, Republic of Korea, and Romania), utilizing four different computer codes (ATMIKA, CATHENA, MARS-KS, and RELAP5). General conclusions are reached and recommendations made.
Comparison of the thermal neutron scattering treatment in MCNP6 and GEANT4 codes
Tran, H. N.; Marchix, A.; Letourneau, A.; Darpentigny, J.; Menelle, A.; Ott, F.; Schwindling, J.; Chauvin, N.
2018-06-01
To ensure the reliability of simulation tools, verification and comparison should be made regularly. This paper describes the work performed in order to compare the neutron transport treatment in MCNP6.1 and GEANT4-10.3 in the thermal energy range. This work focuses on the thermal neutron scattering processes for several potential materials which would be involved in the neutron source designs of Compact Accelerator-based Neutrons Sources (CANS), such as beryllium metal, beryllium oxide, polyethylene, graphite, para-hydrogen, light water, heavy water, aluminium and iron. Both thermal scattering law and free gas model, coming from the evaluated data library ENDF/B-VII, were considered. It was observed that the GEANT4.10.03-patch2 version was not able to account properly the coherent elastic process occurring in crystal lattice. This bug is treated in this work and it should be included in the next release of the code. Cross section sampling and integral tests have been performed for both simulation codes showing a fair agreement between the two codes for most of the materials except for iron and aluminium.
Comparison calculations of WWER-1000 fuel assemblies by using the MCNP 4.2 a KASSETA codes
International Nuclear Information System (INIS)
Trgina, M.
1993-12-01
The power multiplication and distribution factors are compared for various geometries and material configurations of WWER-1000 fuel assemblies. The calculations were performed in 2 ways: (i) using nuclear data, employing older and current data collections, and (ii) using the author's own model based on the KASSETA code. The comparison code MCNP 4.2 is described, intended for computerized simulation of the transport of neutrons, photons and electrons. This code uses its own cross section library. The methodology is outlined and a specification of the Monte Carlo method employed is given. The use of the refined data library gave rise to appreciable deviations of the multiplication factors in all variants. The use of the older data library led to identical criticality results for the variant with water holes. For inserted absorbers the discrepancies in criticality and in power distribution data are appreciable. The marked disagreement between the results of application of the MCNP 4.2 and KASSETA codes for the variants with inserted control elements is indicative of inappropriateness of the approximation procedure in the latter code. (J.B.). 2 tabs., 11 figs., 11 refs
Comparison and Evolution of Energy Consumption in Moroccan Agro-food Industries
El Badaoui, Meryem; Touzani, Abdellatif
2017-06-01
The aim of this article is to establish a comparison between the Moroccan energy consumption and the BREF the reference document on best available techniques in the food industries, then an evolution of this consumption by 2030 in order to better understand it and to define strategies to reduce energy bill. According to a survey conducted among 5000 Moroccan companies, we were able to compare the energy consumption of the agro-food industries including sugar industry, dairy industry, cereal industry; fatty substances industry and fishing industry with that of the BREF. Also an evolution of Moroccan consumption was established by 2030 using the linear regression method, and then calculated a non-negligible average annual growth rate (AAGR). The results show that the Moroccan energy consumption is adequate to that of the BREF, and an energy consumption constantly increasing by registering a non-negligible AAGR.
International Nuclear Information System (INIS)
Nakamura, Yasunori; Tam, Nguyen Ngoc; Ohata, Tomiso; Morita, Kiminori; Nakamachi, Eiji
2004-01-01
The crystallographic texture evolution induced by plastic deformation in the sheet metal forming process has a great influence on its formability. In the present study, a dynamic explicit finite element (FE) analysis code is newly developed by introducing a crystallographic homogenization method to estimate the polycrystalline sheet metal formability, such as the extreme thinning and 'earing'. This code can predict the plastic deformation induced texture evolution at the micro scale and the plastic anisotropy at the macro scale, simultaneously. This multi-scale analysis can couple the microscopic crystal plasticity inhomogeneous deformation with the macroscopic continuum deformation. In this homogenization process, the stress at the macro scale is defined by the volume average of those of the corresponding microscopic crystal aggregations in satisfying the equation of motion and compatibility condition in the micro scale 'unit cell', where the periodicity of deformation is satisfied. This homogenization algorithm is implemented in the conventional dynamic explicit finite element code by employing the updated Lagrangian formulation and the rate type elastic/viscoplastic constitutive equation.At first, it has been confirmed through a texture evolution analyses in cases of typical deformation modes that Taylor's 'constant strain homogenization algorithm' yields extreme concentration toward the preferred crystal orientations compared with our homogenization one. Second, we study the plastic anisotropy effects on 'earing' in the hemispherical cup deep drawing process of pure ferrite phase sheet metal. By the comparison of analytical results with those of Taylor's assumption, conclusions are drawn that the present newly developed dynamic explicit crystallographic homogenization FEM shows more reasonable prediction of plastic deformation induced texture evolution and plastic anisotropy at the macro scale
Comparison of the THYC and FLICA-3M codes by the pseudo-cubic thin-plate method
International Nuclear Information System (INIS)
Banner, D.; Crecy, F. de.
1993-06-01
The pseudo cubic Spline method (PCSM) is a statistical tool developed by the CEA. It is designed to analyse experimental points and in particular thermalhydraulic data. Predictors of the occurrence of critical heat flux are obtained by using Spline functions. In this paper, predictors have been computed from the same CHF databases by using two different flow analyses to derive local thermal-hydraulic variables at the CHF location. In fact, CEA's FLICA-3M represents rod bundles by interconnected subchannels whereas EDF's THYC code uses a porous 3D approach. In a first step, the PCSM is briefly presented as well as the two codes studied here. Then, the comparison methodology is explained in order to prove that advanced analysis of thermalhydraulic codes can be achieved with the PCSM. (authors). 6 figs., 2 tabs., 5 refs
The coevolution of genes and genetic codes: Crick's frozen accident revisited.
Sella, Guy; Ardell, David H
2006-09-01
The standard genetic code is the nearly universal system for the translation of genes into proteins. The code exhibits two salient structural characteristics: it possesses a distinct organization that makes it extremely robust to errors in replication and translation, and it is highly redundant. The origin of these properties has intrigued researchers since the code was first discovered. One suggestion, which is the subject of this review, is that the code's organization is the outcome of the coevolution of genes and genetic codes. In 1968, Francis Crick explored the possible implications of coevolution at different stages of code evolution. Although he argues that coevolution was likely to influence the evolution of the code, he concludes that it falls short of explaining the organization of the code we see today. The recent application of mathematical modeling to study the effects of errors on the course of coevolution, suggests a different conclusion. It shows that coevolution readily generates genetic codes that are highly redundant and similar in their error-correcting organization to the standard code. We review this recent work and suggest that further affirmation of the role of coevolution can be attained by investigating the extent to which the outcome of coevolution is robust to other influences that were present during the evolution of the code.
Directory of Open Access Journals (Sweden)
McCulloch Alan
2006-04-01
Full Text Available Abstract Despite growing evidence of rapid evolution in protein coding genes, the contribution of positive selection to intra- and interspecific differences in protein coding regions of the genome is unclear. We attempted to see if genes coding for secreted proteins and genes with narrow expression, specifically those preferentially expressed in the mammary gland, have diverged at a faster rate between domestic cattle (Bos taurus and humans (Homo sapiens than other genes and whether positive selection is responsible. Using a large data set, we identified groups of genes based on secretion and expression patterns and compared them for the rate of nonsynonymous (dN and synonymous (dS substitutions per site and the number of radical (Dr and conservative (Dc amino acid substitutions. We found evidence of rapid evolution in genes with narrow expression, especially for those expressed in the liver and mammary gland and for genes coding for secreted proteins. We compared common human polymorphism data with human-cattle divergence and found that genes with high evolutionary rates in human-cattle divergence also had a large number of common human polymorphisms. This argues against positive selection causing rapid divergence in these groups of genes. In most cases dN/dS ratios were lower in human-cattle divergence than in common human polymorphism presumably due to differences in the effectiveness of purifying selection between long-term divergence and short-term polymorphism.
A comparison of biological and cultural evolution.
Portin, Petter
2015-03-01
This review begins with a definition of biological evolution and a description of its general principles. This is followed by a presentation of the biological basis of culture, specifically the concept of social selection. Further, conditions for cultural evolution are proposed, including a suggestion for language being the cultural replicator corresponding to the concept of the gene in biological evolution. Principles of cultural evolution are put forward and compared to the principles of biological evolution. Special emphasis is laid on the principle of selection in cultural evolution, including presentation of the concept of cultural fitness. The importance of language as a necessary condition for cultural evolution is stressed. Subsequently, prime differences between biological and cultural evolution are presented, followed by a discussion on interaction of our genome and our culture. The review aims at contributing to the present discussion concerning the modern development of the general theory of evolution, for example by giving a tentative formulation of the necessary and sufficient conditions for cultural evolution, and proposing that human creativity and mind reading or theory of mind are motors specific for it. The paper ends with the notion of the still ongoing coevolution of genes and culture.
Modelling and description of PHEBUS FPT1 experiment with the computer code ASTEC
International Nuclear Information System (INIS)
Tusheva, P.; Kalchev, B.
2005-01-01
The PHEBUS Fission Product (FP) programme was initiated in 1988 after major severe reactor accidents (at Three Mile Island and Chernobyl). The main objective of the programme is to study the release, transport and retention of fission products in an in-pile facility under severe accident conditions in a LWR. This paper covers the FPT 1 experiment description and modelling by the ASTEC code. The main calculated events, the temperature evolution at the middle part of the test bundle, the state of the bundle degradation at the end of calculation and the calculated Hydrogen production are presented and discussed. The obtained results from the ASTEC code calculation show a good agreement between experimental and calculated results. The calculated Hydrogen production is slightly overestimated in comparison with the experimental results
Donovan, Peter
2014-01-01
Covers the historical context and the evolution of the technically complex Allied Signals Intelligence (Sigint) activity against Japan from 1920 to 1945 Describes, explains and analyzes the code breaking techniques developed during the war in the Pacific Exposes the blunders (in code construction and use) made by the Japanese Navy that led to significant US Naval victories
Benchmark Problems of the Geothermal Technologies Office Code Comparison Study
Energy Technology Data Exchange (ETDEWEB)
White, Mark D. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Podgorney, Robert [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Kelkar, Sharad M. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); McClure, Mark W. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Danko, George [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Ghassemi, Ahmad [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Fu, Pengcheng [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Bahrami, Davood [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Barbier, Charlotte [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Cheng, Qinglu [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Chiu, Kit-Kwan [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Detournay, Christine [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Elsworth, Derek [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Fang, Yi [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Furtney, Jason K. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Gan, Quan [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Gao, Qian [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Guo, Bin [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Hao, Yue [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Horne, Roland N. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Huang, Kai [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Im, Kyungjae [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Norbeck, Jack [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Rutqvist, Jonny [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Safari, M. R. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Sesetty, Varahanaresh [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Sonnenthal, Eric [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Tao, Qingfeng [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); White, Signe K. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Wong, Yang [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Xia, Yidong [Pacific Northwest National Lab. (PNNL), Richland, WA (United States)
2016-12-02
A diverse suite of numerical simulators is currently being applied to predict or understand the performance of enhanced geothermal systems (EGS). To build confidence and identify critical development needs for these analytical tools, the United States Department of Energy, Geothermal Technologies Office has sponsored a Code Comparison Study (GTO-CCS), with participants from universities, industry, and national laboratories. A principal objective for the study was to create a community forum for improvement and verification of numerical simulators for EGS modeling. Teams participating in the study were those representing U.S. national laboratories, universities, and industries, and each team brought unique numerical simulation capabilities to bear on the problems. Two classes of problems were developed during the study, benchmark problems and challenge problems. The benchmark problems were structured to test the ability of the collection of numerical simulators to solve various combinations of coupled thermal, hydrologic, geomechanical, and geochemical processes. This class of problems was strictly defined in terms of properties, driving forces, initial conditions, and boundary conditions. Study participants submitted solutions to problems for which their simulation tools were deemed capable or nearly capable. Some participating codes were originally developed for EGS applications whereas some others were designed for different applications but can simulate processes similar to those in EGS. Solution submissions from both were encouraged. In some cases, participants made small incremental changes to their numerical simulation codes to address specific elements of the problem, and in other cases participants submitted solutions with existing simulation tools, acknowledging the limitations of the code. The challenge problems were based on the enhanced geothermal systems research conducted at Fenton Hill, near Los Alamos, New Mexico, between 1974 and 1995. The problems
Hardware-efficient bosonic quantum error-correcting codes based on symmetry operators
Niu, Murphy Yuezhen; Chuang, Isaac L.; Shapiro, Jeffrey H.
2018-03-01
We establish a symmetry-operator framework for designing quantum error-correcting (QEC) codes based on fundamental properties of the underlying system dynamics. Based on this framework, we propose three hardware-efficient bosonic QEC codes that are suitable for χ(2 )-interaction based quantum computation in multimode Fock bases: the χ(2 ) parity-check code, the χ(2 ) embedded error-correcting code, and the χ(2 ) binomial code. All of these QEC codes detect photon-loss or photon-gain errors by means of photon-number parity measurements, and then correct them via χ(2 ) Hamiltonian evolutions and linear-optics transformations. Our symmetry-operator framework provides a systematic procedure for finding QEC codes that are not stabilizer codes, and it enables convenient extension of a given encoding to higher-dimensional qudit bases. The χ(2 ) binomial code is of special interest because, with m ≤N identified from channel monitoring, it can correct m -photon-loss errors, or m -photon-gain errors, or (m -1 )th -order dephasing errors using logical qudits that are encoded in O (N ) photons. In comparison, other bosonic QEC codes require O (N2) photons to correct the same degree of bosonic errors. Such improved photon efficiency underscores the additional error-correction power that can be provided by channel monitoring. We develop quantum Hamming bounds for photon-loss errors in the code subspaces associated with the χ(2 ) parity-check code and the χ(2 ) embedded error-correcting code, and we prove that these codes saturate their respective bounds. Our χ(2 ) QEC codes exhibit hardware efficiency in that they address the principal error mechanisms and exploit the available physical interactions of the underlying hardware, thus reducing the physical resources required for implementing their encoding, decoding, and error-correction operations, and their universal encoded-basis gate sets.
Inter-comparison of Computer Codes for TRISO-based Fuel Micro-Modeling and Performance Assessment
International Nuclear Information System (INIS)
Boer, Brian; Keun Jo, Chang; Wu, Wen; Ougouag, Abderrafi M.; McEachren, Donald; Venneri, Francesco
2010-01-01
The Next Generation Nuclear Plant (NGNP), the Deep Burn Pebble Bed Reactor (DB-PBR) and the Deep Burn Prismatic Block Reactor (DB-PMR) are all based on fuels that use TRISO particles as their fundamental constituent. The TRISO particle properties include very high durability in radiation environments, hence the designs reliance on the TRISO to form the principal barrier to radioactive materials release. This durability forms the basis for the selection of this fuel type for applications such as Deep Bun (DB), which require exposures up to four times those expected for light water reactors. It follows that the study and prediction of the durability of TRISO particles must be carried as part of the safety and overall performance characterization of all the designs mentioned above. Such evaluations have been carried out independently by the performers of the DB project using independently developed codes. These codes, PASTA, PISA and COPA, incorporate models for stress analysis on the various layers of the TRISO particle (and of the intervening matrix material for some of them), model for fission products release and migration then accumulation within the SiC layer of the TRISO particle, just next to the layer, models for free oxygen and CO formation and migration to the same location, models for temperature field modeling within the various layers of the TRISO particle and models for the prediction of failure rates. All these models may be either internal to the code or external. This large number of models and the possibility of different constitutive data and model formulations and the possibility of a variety of solution techniques makes it highly unlikely that the model would give identical results in the modeling of identical situations. The purpose of this paper is to present the results of an inter-comparison between the codes and to identify areas of agreement and areas that need reconciliation. The inter-comparison has been carried out by the cooperating
A Comparison Among Plastic Deformation Capacities of RC Members According to International Codes
International Nuclear Information System (INIS)
Tripepi, C.; Failla, G.; Santini, A.; Nucera, F.
2008-01-01
The aim is to compare plastic deformation capacities of flexure-controlled reinforced concrete members, as predicted by the Italian Seismic Code, Eurocode 8 and FEMA356. For completeness, recent studies in the literature are also referred to. The comparison is pursued in context with a nonlinear static analysis run on 2D frame structures. This allows to assess whether and to which extent plastic deformation capacities may be affected by variations in those quantities, such as shear span and/or axial load, depending on which plastic deformation capacities are generally given
Verification of CTF/PARCSv3.2 coupled code in a Turbine Trip scenario
International Nuclear Information System (INIS)
Abarca, A.; Hidalga, P.; Miro, R.; Verdu, G.; Sekhri, A.
2017-01-01
variation of thermal-hydraulic and neutronic variables. A code-to-code verification has been made comparing safety parameters calculated by TRACE and CTF/PARCS. In addition, the core behavior has been analyzed by means of the code-to-code comparison of the most relevant core parameters, such as core power and steam dome pressure temporal evolutions. (author)
Integrated Validation System for a Thermal-hydraulic System Code, TASS/SMR-S
Energy Technology Data Exchange (ETDEWEB)
Kim, Hee-Kyung; Kim, Hyungjun; Kim, Soo Hyoung; Hwang, Young-Dong [Korea Atomic Energy Research Institute, Daejeon (Korea, Republic of); Kim, Hyeon-Soo [Chungnam National University, Daejeon (Korea, Republic of)
2015-10-15
Development including enhancement and modification of thermal-hydraulic system computer code is indispensable to a new reactor, SMART. Usually, a thermal-hydraulic system code validation is achieved by a comparison with the results of corresponding physical effect tests. In the reactor safety field, a similar concept, referred to as separate effect tests has been used for a long time. But there are so many test data for comparison because a lot of separate effect tests and integral effect tests are required for a code validation. It is not easy to a code developer to validate a computer code whenever a code modification is occurred. IVS produces graphs which shown the comparison the code calculation results with the corresponding test results automatically. IVS was developed for a validation of TASS/SMR-S code. The code validation could be achieved by a comparison code calculation results with corresponding test results. This comparison was represented as a graph for convenience. IVS is useful before release a new code version. The code developer can validate code result easily using IVS. Even during code development, IVS could be used for validation of code modification. The code developer could gain a confidence about his code modification easily and fast and could be free from tedious and long validation work. The popular software introduced in IVS supplies better usability and portability.
International Nuclear Information System (INIS)
Fermandjian, J.; Beonio-Brocchieri, F.
1986-09-01
The present study concerns a comparative exercise, performed within the framework of the Commission of the European Communities, of the computer codes used in reactor safety in order to assess their capability of realistically describing the aerosol behavior in PWR reactor containment buildings during severe accidents. The codes included in the present study are the following: AEROSIM-M, AEROSOLS/Bl, CORRAL-2, NAUA Mod5. In AEROSIM-M, AEROSOLS/Bl and NAUA Mod5, the integro-differential equation for the evolution of the particle mass distribution is approximated by a set of coupled first order differential equations. To this end, the particle distribution function is replaced by a number of discrete monodisperse fractions. The CORRAL-2 has an essentially empirical basis (processes not explicitely modelled, but their net effects accounted for). The physical processes taken into account in the codes are shown finally
Comparison of Engine Cycle Codes for Rocket-Based Combined Cycle Engines
Waltrup, Paul J.; Auslender, Aaron H.; Bradford, John E.; Carreiro, Louis R.; Gettinger, Christopher; Komar, D. R.; McDonald, J.; Snyder, Christopher A.
2002-01-01
This paper summarizes the results from a one day workshop on Rocket-Based Combined Cycle (RBCC) Engine Cycle Codes held in Monterey CA in November of 2000 at the 2000 JANNAF JPM with the authors as primary participants. The objectives of the workshop were to discuss and compare the merits of existing Rocket-Based Combined Cycle (RBCC) engine cycle codes being used by government and industry to predict RBCC engine performance and interpret experimental results. These merits included physical and chemical modeling, accuracy and user friendliness. The ultimate purpose of the workshop was to identify the best codes for analyzing RBCC engines and to document any potential shortcomings, not to demonstrate the merits or deficiencies of any particular engine design. Five cases representative of the operating regimes of typical RBCC engines were used as the basis of these comparisons. These included Mach 0 sea level static and Mach 1.0 and Mach 2.5 Air-Augmented-Rocket (AAR), Mach 4 subsonic combustion ramjet or dual-mode scramjet, and Mach 8 scramjet operating modes. Specification of a generic RBCC engine geometry and concomitant component operating efficiencies, bypass ratios, fuel/oxidizer/air equivalence ratios and flight dynamic pressures were provided. The engine included an air inlet, isolator duct, axial rocket motor/injector, axial wall fuel injectors, diverging combustor, and exit nozzle. Gaseous hydrogen was used as the fuel with the rocket portion of the system using a gaseous H2/O2 propellant system to avoid cryogenic issues. The results of the workshop, even after post-workshop adjudication of differences, were surprising. They showed that the codes predicted essentially the same performance at the Mach 0 and I conditions, but progressively diverged from a common value (for example, for fuel specific impulse, Isp) as the flight Mach number increased, with the largest differences at Mach 8. The example cases and results are compared and discussed in this paper.
International Nuclear Information System (INIS)
Tobias, M.L.
1987-01-01
Experiments were done on several aerosols in air atmospheres at varying temperatures and humidity conditions of interest in forming a data base for testing aerosol behavior models used as part of the process of evaluating the ''source term'' in light water reactor accidents. This paper deals with the problems of predicting the observed experimental data for suspended aerosol concentration with aerosol calculational codes. Comparisons of measured versus predicted data are provided
International Nuclear Information System (INIS)
Qiu Qing-Lai; Xiao Bing-Jia; Guo Yong; Liu Lei; Wang Yue-Hang
2017-01-01
Vertical displacement event (VDE) is a big challenge to the existing tokamak equipment and that being designed. As a Chinese next-step tokamak, the Chinese Fusion Engineering Test Reactor (CFETR) has to pay attention to the VDE study with full-fledged numerical codes during its conceptual design. The tokamak simulation code (TSC) is a free boundary time-dependent axisymmetric tokamak simulation code developed in PPPL, which advances the MHD equations describing the evolution of the plasma in a rectangular domain. The electromagnetic interactions between the surrounding conductor circuits and the plasma are solved self-consistently. The TokSys code is a generic modeling and simulation environment developed in GA. Its RZIP model treats the plasma as a fixed spatial distribution of currents which couple with the surrounding conductors through circuit equations. Both codes have been individually used for the VDE study on many tokamak devices, such as JT-60U, EAST, NSTX, DIII-D, and ITER. Considering the model differences, benchmark work is needed to answer whether they reproduce each other’s results correctly. In this paper, the TSC and TokSys codes are used for analyzing the CFETR vertical instability passive and active controls design simultaneously. It is shown that with the same inputs, the results from these two codes conform with each other. (paper)
UEDGE code comparisons with DIII-D bolometer data
Energy Technology Data Exchange (ETDEWEB)
Daniel, J.M.
1994-12-01
This paper describes the work done to develop a bolometer post processor that converts volumetric radiated power values taken from a UEDGE solution, to a line integrated radiated power along chords of the bolometers in the DIII-D tokamak. The UEDGE code calculates plasma physics quantities, such as plasma density, radiated power, or electron temperature, and compares them to actual diagnostic measurements taken from the scrape off layer (SOL) and divertor regions of the DIII-D tokamak. Bolometers are devices measuring radiated power within the tokamak. The bolometer interceptors are made up of two complete arrays, an upper array with a vertical view and a lower array with a horizontal view, so that a two dimensional profile of the radiated power may be obtained. The bolometer post processor stores line integrated values taken from UEDGE solutions into a file in tabular format. Experimental data is then put into tabular form and placed in another file. Comparisons can be made between the UEDGE solutions and actual bolometer data. Analysis has been done to determine the accuracy of the plasma physics involved in producing UEDGE simulations.
Modelling of LOCA Tests with the BISON Fuel Performance Code
Energy Technology Data Exchange (ETDEWEB)
Williamson, Richard L [Idaho National Laboratory; Pastore, Giovanni [Idaho National Laboratory; Novascone, Stephen Rhead [Idaho National Laboratory; Spencer, Benjamin Whiting [Idaho National Laboratory; Hales, Jason Dean [Idaho National Laboratory
2016-05-01
BISON is a modern finite-element based, multidimensional nuclear fuel performance code that is under development at Idaho National Laboratory (USA). Recent advances of BISON include the extension of the code to the analysis of LWR fuel rod behaviour during loss-of-coolant accidents (LOCAs). In this work, BISON models for the phenomena relevant to LWR cladding behaviour during LOCAs are described, followed by presentation of code results for the simulation of LOCA tests. Analysed experiments include separate effects tests of cladding ballooning and burst, as well as the Halden IFA-650.2 fuel rod test. Two-dimensional modelling of the experiments is performed, and calculations are compared to available experimental data. Comparisons include cladding burst pressure and temperature in separate effects tests, as well as the evolution of fuel rod inner pressure during ballooning and time to cladding burst. Furthermore, BISON three-dimensional simulations of separate effects tests are performed, which demonstrate the capability to reproduce the effect of azimuthal temperature variations in the cladding. The work has been carried out in the frame of the collaboration between Idaho National Laboratory and Halden Reactor Project, and the IAEA Coordinated Research Project FUMAC.
The one-dimensional transport codes MAKOKOT. Presentation and directions for use
International Nuclear Information System (INIS)
Capes, H.; Mercier, C.; Morera, J.P.
1986-06-01
In this note are presented the different one-dimensional evolution codes available to date under the generic name MAKOKOT. They are six principal codes: - TRANS: for ion and electron transport; -NEUTRE: for neutrals; -IMPUR: for impurities; -ECRH: for electron cyclotron resonance; -DENT: for sawtooth modelling and analysis; -BILAN: for global verification of conservation. One supplementary code is added which is an impurity evolution code; it takes in account, in 1-D geometry, the buffer zone generated by the limiter between the hot plasma and the wall. An abundant bibliography is given. A comprehensive manner of using is given which underlines the use versatility of these codes [fr
Sun, Zhoutong; Lonsdale, Richard; Li, Guangyue; Reetz, Manfred T
2016-10-04
Saturation mutagenesis at sites lining the binding pockets of enzymes constitutes a viable protein engineering technique for enhancing or inverting stereoselectivity. Statistical analysis shows that oversampling in the screening step (the bottleneck) increases astronomically as the number of residues in the randomization site increases, which is the reason why reduced amino acid alphabets have been employed, in addition to splitting large sites into smaller ones. Limonene epoxide hydrolase (LEH) has previously served as the experimental platform in these methodological efforts, enabling comparisons between single-code saturation mutagenesis (SCSM) and triple-code saturation mutagenesis (TCSM); these employ either only one or three amino acids, respectively, as building blocks. In this study the comparative platform is extended by exploring the efficacy of double-code saturation mutagenesis (DCSM), in which the reduced amino acid alphabet consists of two members, chosen according to the principles of rational design on the basis of structural information. The hydrolytic desymmetrization of cyclohexene oxide is used as the model reaction, with formation of either (R,R)- or (S,S)-cyclohexane-1,2-diol. DCSM proves to be clearly superior to the likewise tested SCSM, affording both R,R- and S,S-selective mutants. These variants are also good catalysts in reactions of further substrates. Docking computations reveal the basis of enantioselectivity. © 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.
International Nuclear Information System (INIS)
Neymotin, L.
1994-04-01
Over the past several years, the OECD/NEA and CEC sponsored an international program intercomparing a group of six probabilistic consequence assessment (PCA) codes designed to simulate health and economic consequences of radioactive releases into atmosphere of radioactive materials following severe accidents at nuclear power plants (NPPs): ARANO (Finland), CONDOR (UK), COSYMA (CEC), LENA (Sweden), MACCS (USA), and OSCAAR (Japan). In parallel with this effort, two separate groups performed similar calculations using the MACCS and COSYMA codes. Results produced in the MACCS Users Group (Greece, Italy, Spain, and USA) calculations and their comparison are contained in the present report. Version 1.5.11.1 of the MACCS code was used for the calculations. Good agreement between the results produced in the four participating calculations has been reached, with the exception of the results related to the ingestion pathway dose predictions. The main reason for the scatter in those particular results is attributed to the lack of a straightforward implementation of the specifications for agricultural production and counter-measures criteria provided for the exercise. A significantly smaller scatter in predictions of other consequences was successfully explained by differences in meteorological files and weather sampling, grids, rain distance intervals, dispersion model options, and population distributions
Evolution at the tips: Asclepias phylogenomics and new perspectives on leaf surfaces.
Fishbein, Mark; Straub, Shannon C K; Boutte, Julien; Hansen, Kimberly; Cronn, Richard C; Liston, Aaron
2018-03-01
Leaf surface traits, such as trichome density and wax production, mediate important ecological processes such as anti-herbivory defense and water-use efficiency. We present a phylogenetic analysis of Asclepias plastomes as a framework for analyzing the evolution of trichome density and presence of epicuticular waxes. We produced a maximum-likelihood phylogeny using plastomes of 103 species of Asclepias. We reconstructed ancestral states and used model comparisons in a likelihood framework to analyze character evolution across Asclepias. We resolved the backbone of Asclepias, placing the Sonoran Desert clade and Incarnatae clade as successive sisters to the remaining species. We present novel findings about leaf surface evolution of Asclepias-the ancestor is reconstructed as waxless and sparsely hairy, a macroevolutionary optimal trichome density is supported, and the rate of evolution of trichome density has accelerated. Increased sampling and selection of best-fitting models of evolution provide more resolved and robust estimates of phylogeny and character evolution than obtained in previous studies. Evolutionary inferences are more sensitive to character coding than model selection. © 2018 The Authors. American Journal of Botany is published by Wiley Periodicals, Inc. on behalf of the Botanical Society of America.
International Nuclear Information System (INIS)
Bujan, A.; Adamik, V.; Misak, J.
1986-01-01
A brief description is presented of the expansion of the SICHTA-83 computer code for the analysis of the thermal history of the fuel channel for large LOCAs by modelling the mechanical behaviour of fuel element cladding. The new version of the code has a more detailed treatment of heat transfer in the fuel-cladding gap because it also respects the mechanical (plastic) deformations of the cladding and the fuel-cladding interaction (magnitude of contact pressure). Also respected is the change in pressure of the gas filling of the fuel element, the mechanical criterion is considered of a failure of the cladding and the degree is considered of the blockage of the through-flow cross section for coolant flow in the fuel channel. The LOCA WWER-440 model computation provides a comparison of the new SICHTA-85/MOD 1 code with the results of the original 83 version of SICHTA. (author)
Leckey, Cara A C; Wheeler, Kevin R; Hafiychuk, Vasyl N; Hafiychuk, Halyna; Timuçin, Doğan A
2018-03-01
Ultrasonic wave methods constitute the leading physical mechanism for nondestructive evaluation (NDE) and structural health monitoring (SHM) of solid composite materials, such as carbon fiber reinforced polymer (CFRP) laminates. Computational models of ultrasonic wave excitation, propagation, and scattering in CFRP composites can be extremely valuable in designing practicable NDE and SHM hardware, software, and methodologies that accomplish the desired accuracy, reliability, efficiency, and coverage. The development and application of ultrasonic simulation approaches for composite materials is an active area of research in the field of NDE. This paper presents comparisons of guided wave simulations for CFRP composites implemented using four different simulation codes: the commercial finite element modeling (FEM) packages ABAQUS, ANSYS, and COMSOL, and a custom code executing the Elastodynamic Finite Integration Technique (EFIT). Benchmark comparisons are made between the simulation tools and both experimental laser Doppler vibrometry data and theoretical dispersion curves. A pristine and a delamination type case (Teflon insert in the experimental specimen) is studied. A summary is given of the accuracy of simulation results and the respective computational performance of the four different simulation tools. Published by Elsevier B.V.
A class of Sudan-decodable codes
DEFF Research Database (Denmark)
Nielsen, Rasmus Refslund
2000-01-01
In this article, Sudan's algorithm is modified into an efficient method to list-decode a class of codes which can be seen as a generalization of Reed-Solomon codes. The algorithm is specialized into a very efficient method for unique decoding. The code construction can be generalized based...... on algebraic-geometry codes and the decoding algorithms are generalized accordingly. Comparisons with Reed-Solomon and Hermitian codes are made....
Voloch, Carolina M; Capellão, Renata T; Mello, Beatriz; Schrago, Carlos G
2014-11-19
Lyssavirus is a diverse genus of viruses that infect a variety of mammalian hosts, typically causing encephalitis. The evolution of this lineage, particularly the rabies virus, has been a focus of research because of the extensive occurrence of cross-species transmission, and the distinctive geographical patterns present throughout the diversification of these viruses. Although numerous studies have examined pattern-related questions concerning Lyssavirus evolution, analyses of the evolutionary processes acting on Lyssavirus diversification are scarce. To clarify the relevance of positive natural selection in Lyssavirus diversification, we conducted a comprehensive scan for episodic diversifying selection across all lineages and codon sites of the five coding regions in lyssavirus genomes. Although the genomes of these viruses are generally conserved, the glycoprotein (G), RNA-dependent RNA polymerase (L) and polymerase (P) genes were frequently targets of adaptive evolution during the diversification of the genus. Adaptive evolution is particularly manifest in the glycoprotein gene, which was inferred to have experienced the highest density of positively selected codon sites along branches. Substitutions in the L gene were found to be associated with the early diversification of phylogroups. A comparison between the number of positively selected sites inferred along the branches of RABV population branches and Lyssavirus intespecies branches suggested that the occurrence of positive selection was similar on the five coding regions of the genome in both groups.
Directory of Open Access Journals (Sweden)
Carolina M. Voloch
2014-11-01
Full Text Available Lyssavirus is a diverse genus of viruses that infect a variety of mammalian hosts, typically causing encephalitis. The evolution of this lineage, particularly the rabies virus, has been a focus of research because of the extensive occurrence of cross-species transmission, and the distinctive geographical patterns present throughout the diversification of these viruses. Although numerous studies have examined pattern-related questions concerning Lyssavirus evolution, analyses of the evolutionary processes acting on Lyssavirus diversification are scarce. To clarify the relevance of positive natural selection in Lyssavirus diversification, we conducted a comprehensive scan for episodic diversifying selection across all lineages and codon sites of the five coding regions in lyssavirus genomes. Although the genomes of these viruses are generally conserved, the glycoprotein (G, RNA-dependent RNA polymerase (L and polymerase (P genes were frequently targets of adaptive evolution during the diversification of the genus. Adaptive evolution is particularly manifest in the glycoprotein gene, which was inferred to have experienced the highest density of positively selected codon sites along branches. Substitutions in the L gene were found to be associated with the early diversification of phylogroups. A comparison between the number of positively selected sites inferred along the branches of RABV population branches and Lyssavirus intespecies branches suggested that the occurrence of positive selection was similar on the five coding regions of the genome in both groups.
Update on comparison of the particle production using Mars simulation code
Prior, G; Kirk, H G; Souchlas, N; Ding, X
2011-01-01
In the International Design Study for the Neutrino Factory (IDS-NF), a 5-15 GeV (kinetic energy) proton beam impinges a Hg jet target, in order to produce pions that will decay into muons. The muons are captured and transformed into a beam, then passed to the downstream acceleration system. The target sits in a solenoid eld tapering from 20 T down to below 2 T, over several meters, permitting an optimized capture of the pions that will produce useful muons for the machine. The target and pion capture systems have been simulated using MARS. This paper presents an updated comparison of the particles production using the MARS code versions m1507 and m1510 on different machines located at the European Organization for Nuclear Research (CERN) and Brookhaven National Laboratory (BNL).
International Nuclear Information System (INIS)
Avery, A.F.; Locke, H.F.
1992-03-01
In 1985 the Reactor Physics Committee of the Nuclear Energy Agency initiated an intercomparison of codes for the calculation of the performance of shielding for the transportation of spent reactor fuel. The results of the application of a range of codes to the prediction of the dose-rates in the four theoretical benchmarks set to examine the attenuation of radiation through a variety of cask geometries are presented in this report. The contributions from neutrons, fission product gamma-rays and secondary gamma-rays are tabulated separately, and grouped according to the type of method of calculation employed. A brief discussion is included for each set of results, and overall comparisons of the methods, codes, and nuclear data are made. A number of conclusions are drawn on the advantages and disadvantages of the various methods of calculation, based upon the results of their application to these four benchmark problems
Mühlhausen, Stefanie; Findeisen, Peggy; Plessmann, Uwe; Urlaub, Henning; Kollmar, Martin
2016-07-01
The genetic code is the cellular translation table for the conversion of nucleotide sequences into amino acid sequences. Changes to the meaning of sense codons would introduce errors into almost every translated message and are expected to be highly detrimental. However, reassignment of single or multiple codons in mitochondria and nuclear genomes, although extremely rare, demonstrates that the code can evolve. Several models for the mechanism of alteration of nuclear genetic codes have been proposed (including "codon capture," "genome streamlining," and "ambiguous intermediate" theories), but with little resolution. Here, we report a novel sense codon reassignment in Pachysolen tannophilus, a yeast related to the Pichiaceae. By generating proteomics data and using tRNA sequence comparisons, we show that Pachysolen translates CUG codons as alanine and not as the more usual leucine. The Pachysolen tRNACAG is an anticodon-mutated tRNA(Ala) containing all major alanine tRNA recognition sites. The polyphyly of the CUG-decoding tRNAs in yeasts is best explained by a tRNA loss driven codon reassignment mechanism. Loss of the CUG-tRNA in the ancient yeast is followed by gradual decrease of respective codons and subsequent codon capture by tRNAs whose anticodon is not part of the aminoacyl-tRNA synthetase recognition region. Our hypothesis applies to all nuclear genetic code alterations and provides several testable predictions. We anticipate more codon reassignments to be uncovered in existing and upcoming genome projects. © 2016 Mühlhausen et al.; Published by Cold Spring Harbor Laboratory Press.
CHEMICAL EVOLUTION LIBRARY FOR GALAXY FORMATION SIMULATION
International Nuclear Information System (INIS)
Saitoh, Takayuki R.
2017-01-01
We have developed a software library for chemical evolution simulations of galaxy formation under the simple stellar population (SSP) approximation. In this library, all of the necessary components concerning chemical evolution, such as initial mass functions, stellar lifetimes, yields from Type II and Type Ia supernovae, asymptotic giant branch stars, and neutron star mergers, are compiled from the literature. Various models are pre-implemented in this library so that users can choose their favorite combination of models. Subroutines of this library return released energy and masses of individual elements depending on a given event type. Since the redistribution manner of these quantities depends on the implementation of users’ simulation codes, this library leaves it up to the simulation code. As demonstrations, we carry out both one-zone, closed-box simulations and 3D simulations of a collapsing gas and dark matter system using this library. In these simulations, we can easily compare the impact of individual models on the chemical evolution of galaxies, just by changing the control flags and parameters of the library. Since this library only deals with the part of chemical evolution under the SSP approximation, any simulation codes that use the SSP approximation—namely, particle-base and mesh codes, as well as semianalytical models—can use it. This library is named “CELib” after the term “Chemical Evolution Library” and is made available to the community.
CHEMICAL EVOLUTION LIBRARY FOR GALAXY FORMATION SIMULATION
Energy Technology Data Exchange (ETDEWEB)
Saitoh, Takayuki R., E-mail: saitoh@elsi.jp [Earth-Life Science Institute, Tokyo Institute of Technology, 2-12-1, Ookayama, Meguro, Tokyo, 152-8551 (Japan)
2017-02-01
We have developed a software library for chemical evolution simulations of galaxy formation under the simple stellar population (SSP) approximation. In this library, all of the necessary components concerning chemical evolution, such as initial mass functions, stellar lifetimes, yields from Type II and Type Ia supernovae, asymptotic giant branch stars, and neutron star mergers, are compiled from the literature. Various models are pre-implemented in this library so that users can choose their favorite combination of models. Subroutines of this library return released energy and masses of individual elements depending on a given event type. Since the redistribution manner of these quantities depends on the implementation of users’ simulation codes, this library leaves it up to the simulation code. As demonstrations, we carry out both one-zone, closed-box simulations and 3D simulations of a collapsing gas and dark matter system using this library. In these simulations, we can easily compare the impact of individual models on the chemical evolution of galaxies, just by changing the control flags and parameters of the library. Since this library only deals with the part of chemical evolution under the SSP approximation, any simulation codes that use the SSP approximation—namely, particle-base and mesh codes, as well as semianalytical models—can use it. This library is named “CELib” after the term “Chemical Evolution Library” and is made available to the community.
International Nuclear Information System (INIS)
Lee, Y. J.; Bae, S. W.; Chung, B. D.
2003-02-01
This report records the results of the code validation for the one-dimensional module of the MARS 2.1 thermal hydraulics analysis code by means of result-comparison with the RELAP5/MOD3.3 computer code. For the validation calculations, simulations of the RELAP5 code development assessment problem, which consists of 22 simulation problems in 3 categories, have been selected. The results of the 3 categories of simulations demonstrate that the one-dimensional module of the MARS 2.1 code and the RELAP5/MOD3.3 code are essentially the same code. This is expected as the two codes have basically the same set of field equations, constitutive equations and main thermal hydraulic models. The results suggests that the high level of code validity of the RELAP5/MOD3.3 can be directly applied to the MARS one-dimensional module
Cross-verification of the GENE and XGC codes in preparation for their coupling
Jenko, Frank; Merlo, Gabriele; Bhattacharjee, Amitava; Chang, Cs; Dominski, Julien; Ku, Seunghoe; Parker, Scott; Lanti, Emmanuel
2017-10-01
A high-fidelity Whole Device Model (WDM) of a magnetically confined plasma is a crucial tool for planning and optimizing the design of future fusion reactors, including ITER. Aiming at building such a tool, in the framework of the Exascale Computing Project (ECP) the two existing gyrokinetic codes GENE (Eulerian delta-f) and XGC (PIC full-f) will be coupled, thus enabling to carry out first principle kinetic WDM simulations. In preparation for this ultimate goal, a benchmark between the two codes is carried out looking at ITG modes in the adiabatic electron limit. This verification exercise is also joined by the global Lagrangian PIC code ORB5. Linear and nonlinear comparisons have been carried out, neglecting for simplicity collisions and sources. A very good agreement is recovered on frequency, growth rate and mode structure of linear modes. A similarly excellent agreement is also observed comparing the evolution of the heat flux and of the background temperature profile during nonlinear simulations. Work supported by the US DOE under the Exascale Computing Project (17-SC-20-SC).
International Nuclear Information System (INIS)
Broadhead, B.L.; Locke, H.F.; Avery, A.F.
1994-01-01
The results for Problems 5 and 6 of the NEACRP code comparison as submitted by six participating countries are presented in summary. These problems concentrate on the prediction of the neutron and gamma-ray sources arising in fuel after a specified irradiation, the fuel being uranium oxide for problem 5 and a mixture of uranium and plutonium oxides for problem 6. In both problems the predicted neutron sources are in good agreement for all participants. For gamma rays, however, there are differences, largely due to the omission of bremsstrahlung in some calculations
Natural selection in avian protein-coding genes expressed in brain.
Axelsson, Erik; Hultin-Rosenberg, Lina; Brandström, Mikael; Zwahlén, Martin; Clayton, David F; Ellegren, Hans
2008-06-01
The evolution of birds from theropod dinosaurs took place approximately 150 million years ago, and was associated with a number of specific adaptations that are still evident among extant birds, including feathers, song and extravagant secondary sexual characteristics. Knowledge about the molecular evolutionary background to such adaptations is lacking. Here, we analyse the evolution of > 5000 protein-coding gene sequences expressed in zebra finch brain by comparison to orthologous sequences in chicken. Mean d(N)/d(S) is 0.085 and genes with their maximal expression in the eye and central nervous system have the lowest mean d(N)/d(S) value, while those expressed in digestive and reproductive tissues exhibit the highest. We find that fast-evolving genes (those which have higher than expected rate of nonsynonymous substitution, indicative of adaptive evolution) are enriched for biological functions such as fertilization, muscle contraction, defence response, response to stress, wounding and endogenous stimulus, and cell death. After alignment to mammalian orthologues, we identify a catalogue of 228 genes that show a significantly higher rate of protein evolution in the two bird lineages than in mammals. These accelerated bird genes, representing candidates for avian-specific adaptations, include genes implicated in vocal learning and other cognitive processes. Moreover, colouration genes evolve faster in birds than in mammals, which may have been driven by sexual selection for extravagant plumage characteristics.
International Nuclear Information System (INIS)
Becker, S.A.
1984-05-01
A review of the phases of stellar evolution relevant to Cepheid variables of both Types I and II is presented. Type I Cepheids arise as a result of normal post-main sequence evolutionary behavior of many stars in the intermediate to massive range of stellar masses. In contrast, Type II Cepheids generally originate from low-mass stars of low metalicity which are undergoing post core helium-burning evolution. Despite great progress in the past two decades, uncertainties still remain in such areas as how to best model convective overshoot, semiconvection, stellar atmospheres, rotation, and binary evolution as well as uncertainties in important physical parameters such as the nuclear reaction rates, opacity, and mass loss rates. The potential effect of these uncertainties on stellar evolution models is discussed. Finally, comparisons between theoretical predictions and observations of Cepheid variables are presented for a number of cases. The results of these comparisons show both areas of agreement and disagreement with the latter result providing incentive for further research
International Nuclear Information System (INIS)
Muzzin, Adam; Marchesini, Danilo; Van Dokkum, Pieter G.; Labbe, Ivo; Kriek, Mariska; Franx, Marijn
2009-01-01
We present spectral energy distribution (SED) modeling of a sample of 34 K-selected galaxies at z∼ 2.3. These galaxies have near-infrared (NIR) spectroscopy that samples the rest-frame Balmer/4000 A break as well as deep photometry in 13 broadband filters. New to our analysis is Infrared Array Camera (IRAC) data that extend the SEDs into the rest-frame NIR. Comparing parameters determined from SED fits with and without the IRAC data we find that the IRAC photometry significantly improves the confidence intervals of τ, A v , M star , and SFR for individual galaxies, but does not systematically alter the mean parameters of the sample. We use the IRAC data to assess how well current stellar population synthesis codes describe the rest-frame NIR SEDs of young galaxies where discrepancies between treatments of the thermally pulsating asymptotic giant branch phase of stellar evolution are most pronounced. The models of Bruzual and Charlot, Maraston, and Charlot and Bruzual all successfully reproduce the SEDs of our galaxies with ≤5% differences in the quality of fit; however, the best-fit masses from each code differ systematically by as much as a factor of 1.5, and other parameters vary more, up to factors of 2-3. A comparison of best-fit stellar population parameters from different stellar population synthesis (SPS) codes, dust laws, and metallicities shows that the choice of SPS code is the largest systematic uncertainty in most parameters, and that systematic uncertainties are typically larger than the formal random uncertainties. The SED fitting confirms our previous result that galaxies with strongly suppressed SF account for ∼50% of the K-bright population at z∼ 2.3; however, the uncertainty in this fraction is large due to systematic differences in the specific star formation rates derived from the three SPS models.
The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons.
Braasch, Ingo; Gehrke, Andrew R; Smith, Jeramiah J; Kawasaki, Kazuhiko; Manousaki, Tereza; Pasquier, Jeremy; Amores, Angel; Desvignes, Thomas; Batzel, Peter; Catchen, Julian; Berlin, Aaron M; Campbell, Michael S; Barrell, Daniel; Martin, Kyle J; Mulley, John F; Ravi, Vydianathan; Lee, Alison P; Nakamura, Tetsuya; Chalopin, Domitille; Fan, Shaohua; Wcisel, Dustin; Cañestro, Cristian; Sydes, Jason; Beaudry, Felix E G; Sun, Yi; Hertel, Jana; Beam, Michael J; Fasold, Mario; Ishiyama, Mikio; Johnson, Jeremy; Kehr, Steffi; Lara, Marcia; Letaw, John H; Litman, Gary W; Litman, Ronda T; Mikami, Masato; Ota, Tatsuya; Saha, Nil Ratan; Williams, Louise; Stadler, Peter F; Wang, Han; Taylor, John S; Fontenot, Quenton; Ferrara, Allyse; Searle, Stephen M J; Aken, Bronwen; Yandell, Mark; Schneider, Igor; Yoder, Jeffrey A; Volff, Jean-Nicolas; Meyer, Axel; Amemiya, Chris T; Venkatesh, Byrappa; Holland, Peter W H; Guiguen, Yann; Bobe, Julien; Shubin, Neil H; Di Palma, Federica; Alföldi, Jessica; Lindblad-Toh, Kerstin; Postlethwait, John H
2016-04-01
To connect human biology to fish biomedical models, we sequenced the genome of spotted gar (Lepisosteus oculatus), whose lineage diverged from teleosts before teleost genome duplication (TGD). The slowly evolving gar genome has conserved in content and size many entire chromosomes from bony vertebrate ancestors. Gar bridges teleosts to tetrapods by illuminating the evolution of immunity, mineralization and development (mediated, for example, by Hox, ParaHox and microRNA genes). Numerous conserved noncoding elements (CNEs; often cis regulatory) undetectable in direct human-teleost comparisons become apparent using gar: functional studies uncovered conserved roles for such cryptic CNEs, facilitating annotation of sequences identified in human genome-wide association studies. Transcriptomic analyses showed that the sums of expression domains and expression levels for duplicated teleost genes often approximate the patterns and levels of expression for gar genes, consistent with subfunctionalization. The gar genome provides a resource for understanding evolution after genome duplication, the origin of vertebrate genomes and the function of human regulatory sequences.
Wind power within European grid codes: Evolution, status and outlook
DEFF Research Database (Denmark)
Vrana, Til Kristian; Flynn, Damian; Gomez-Lazaro, Emilio
2018-01-01
Grid codes are technical specifications that define the requirements for any facility connected to electricity grids. Wind power plants are increasingly facing system stability support requirements similar to conventional power stations, which is to some extent unavoidable, as the share of wind...... power in the generation mix is growing. The adaptation process of grid codes for wind power plants is not yet complete, and grid codes are expected to evolve further in the future. ENTSO-E is the umbrella organization for European TSOs, seen by many as a leader in terms of requirements sophistication...... is largely based on the definitions and provisions set out by ENTSO-E. The main European grid code requirements are outlined here, including also HVDC connections and DC-connected power park modules. The focus is on requirements that are considered particularly relevant for large wind power plants...
International Nuclear Information System (INIS)
Li Linghuai; Sofia, Sabatino; Basu, Sarbani; Demarque, Pierre; Ventura, Paolo; Penza, Valentina; Bi Shaolan
2009-01-01
In the second paper of this series we pursue two objectives. First, in order to make the code more sensitive to small effects, we remove many approximations made in Paper I. Second, we include turbulence and rotation in the two-dimensional framework. The stellar equilibrium is described by means of a set of five differential equations, with the introduction of a new dependent variable, namely the perturbation to the radial gravity, that is found when the nonradial effects are considered in the solution of the Poisson equation. Following the scheme of the first paper, we write the equations in such a way that the two-dimensional effects can be easily disentangled. The key concept introduced in this series is the equipotential surface. We use the underlying cause-effect relation to develop a recurrence relation to calculate the equipotential surface functions for uniform rotation, differential rotation, rotation-like toroidal magnetic fields, and turbulence. We also develop a more precise code to numerically solve the two-dimensional stellar structure and evolution equations based on the equipotential surface calculations. We have shown that with this formulation we can achieve the precision required by observations by appropriately selecting the convergence criterion. Several examples are presented to show that the method works well. Since we are interested in modeling the effects of a dynamo-type field on the detailed envelope structure and global properties of the Sun, the code has been optimized for short timescales phenomena (down to 1 yr). The time dependence of the code has so far been tested exclusively to address such problems.
Energy Technology Data Exchange (ETDEWEB)
Visser, B. [Stork Product Eng., Amsterdam (Netherlands)
1996-09-01
To support the discussion on aeroelastic codes, a description of the code FLEXLAST was given and experiences within benchmarks and measurement programmes were summarized. The code FLEXLAST has been developed since 1982 at Stork Product Engineering (SPE). Since 1992 FLEXLAST has been used by Dutch industries for wind turbine and rotor design. Based on the comparison with measurements, it can be concluded that the main shortcomings of wind turbine modelling lie in the field of aerodynamics, wind field and wake modelling. (au)
Genomic comparison of closely related Giant Viruses supports an accordion-like model of evolution
Filée, Jonathan
2015-01-01
Genome gigantism occurs so far in Phycodnaviridae and Mimiviridae (order Megavirales). Origin and evolution of these Giant Viruses (GVs) remain open questions. Interestingly, availability of a collection of closely related GV genomes enabling genomic comparisons offer the opportunity to better understand the different evolutionary forces acting on these genomes. Whole genome alignment for five groups of viruses belonging to the Mimiviridae and Phycodnaviridae families show that there is no tr...
Validation of thermalhydraulic codes
International Nuclear Information System (INIS)
Wilkie, D.
1992-01-01
Thermalhydraulic codes require to be validated against experimental data collected over a wide range of situations if they are to be relied upon. A good example is provided by the nuclear industry where codes are used for safety studies and for determining operating conditions. Errors in the codes could lead to financial penalties, to the incorrect estimation of the consequences of accidents and even to the accidents themselves. Comparison between prediction and experiment is often described qualitatively or in approximate terms, e.g. ''agreement is within 10%''. A quantitative method is preferable, especially when several competing codes are available. The codes can then be ranked in order of merit. Such a method is described. (Author)
Mitochondrial genome evolution in the Saccharomyces sensu stricto complex.
Ruan, Jiangxing; Cheng, Jian; Zhang, Tongcun; Jiang, Huifeng
2017-01-01
Exploring the evolutionary patterns of mitochondrial genomes is important for our understanding of the Saccharomyces sensu stricto (SSS) group, which is a model system for genomic evolution and ecological analysis. In this study, we first obtained the complete mitochondrial sequences of two important species, Saccharomyces mikatae and Saccharomyces kudriavzevii. We then compared the mitochondrial genomes in the SSS group with those of close relatives, and found that the non-coding regions evolved rapidly, including dramatic expansion of intergenic regions, fast evolution of introns and almost 20-fold higher rearrangement rates than those of the nuclear genomes. However, the coding regions, and especially the protein-coding genes, are more conserved than those in the nuclear genomes of the SSS group. The different evolutionary patterns of coding and non-coding regions in the mitochondrial and nuclear genomes may be related to the origin of the aerobic fermentation lifestyle in this group. Our analysis thus provides novel insights into the evolution of mitochondrial genomes.
The Coding Process and Its Challenges
Directory of Open Access Journals (Sweden)
Judith A. Holton, Ph.D.
2010-02-01
Full Text Available Coding is the core process in classic grounded theory methodology. It is through coding that the conceptual abstraction of data and its reintegration as theory takes place. There are two types of coding in a classic grounded theory study: substantive coding, which includes both open and selective coding procedures, and theoretical coding. In substantive coding, the researcher works with the data directly, fracturing and analysing it, initially through open coding for the emergence of a core category and related concepts and then subsequently through theoretical sampling and selective coding of data to theoretically saturate the core and related concepts. Theoretical saturation is achieved through constant comparison of incidents (indicators in the data to elicit the properties and dimensions of each category (code. This constant comparing of incidents continues until the process yields the interchangeability of indicators, meaning that no new properties or dimensions are emerging from continued coding and comparison. At this point, the concepts have achieved theoretical saturation and the theorist shifts attention to exploring the emergent fit of potential theoretical codes that enable the conceptual integration of the core and related concepts to produce hypotheses that account for relationships between the concepts thereby explaining the latent pattern of social behaviour that forms the basis of the emergent theory. The coding of data in grounded theory occurs in conjunction with analysis through a process of conceptual memoing, capturing the theorist’s ideation of the emerging theory. Memoing occurs initially at the substantive coding level and proceeds to higher levels of conceptual abstraction as coding proceeds to theoretical saturation and the theorist begins to explore conceptual reintegration through theoretical coding.
Energy Technology Data Exchange (ETDEWEB)
Zhou, Shengcheng; Wu, Hongchun; Cao, Liangzhi; Zheng, Youqi, E-mail: yqzheng@mail.xjtu.edu.cn; Huang, Kai; He, Mingtao; Li, Xunzhao
2014-10-15
Highlights: • A new code system for design studies of accelerator driven subcritical reactors (ADSRs) is developed. • S{sub N} transport solver in triangular-z meshes, fine deletion analysis and multi-channel thermal-hydraulics analysis are coupled in the code. • Numerical results indicate that the code is reliable and efficient for design studies of ADSRs. - Abstract: Accelerator driven subcritical reactors (ADSRs) have been proposed and widely investigated for the transmutation of transuranics (TRUs). ADSRs have several special characteristics, such as the subcritical core driven by spallation neutrons, anisotropic neutron flux distribution and complex geometry etc. These bring up requirements for development or extension of analysis codes to perform design studies. A code system named LAVENDER has been developed in this paper. It couples the modules for spallation target simulation and subcritical core analysis. The neutron transport-depletion calculation scheme is used based on the homogenized cross section from assembly calculations. A three-dimensional S{sub N} nodal transport code based on triangular-z meshes is employed and a multi-channel thermal-hydraulics analysis model is integrated. In the depletion calculation, the evolution of isotopic composition in the core is evaluated using the transmutation trajectory analysis algorithm (TTA) and fine depletion chains. The new code is verified by several benchmarks and code-to-code comparisons. Numerical results indicate that LAVENDER is reliable and efficient to be applied for the steady-state analysis and reactor core design of ADSRs.
Adaptive distributed source coding.
Varodayan, David; Lin, Yao-Chung; Girod, Bernd
2012-05-01
We consider distributed source coding in the presence of hidden variables that parameterize the statistical dependence among sources. We derive the Slepian-Wolf bound and devise coding algorithms for a block-candidate model of this problem. The encoder sends, in addition to syndrome bits, a portion of the source to the decoder uncoded as doping bits. The decoder uses the sum-product algorithm to simultaneously recover the source symbols and the hidden statistical dependence variables. We also develop novel techniques based on density evolution (DE) to analyze the coding algorithms. We experimentally confirm that our DE analysis closely approximates practical performance. This result allows us to efficiently optimize parameters of the algorithms. In particular, we show that the system performs close to the Slepian-Wolf bound when an appropriate doping rate is selected. We then apply our coding and analysis techniques to a reduced-reference video quality monitoring system and show a bit rate saving of about 75% compared with fixed-length coding.
Energy Technology Data Exchange (ETDEWEB)
Malet, J., E-mail: jeanne.malet@irsn.fr [Institut de Radioprotection et de Surete Nucleaire (IRSN), PSN-RES, SCA, BP 68, 91192 Gif-sur-Yvette (France); Porcheron, E.; Dumay, F.; Vendel, J. [Institut de Radioprotection et de Surete Nucleaire (IRSN), PSN-RES, SCA, BP 68, 91192 Gif-sur-Yvette (France)
2012-12-15
Highlights: Black-Right-Pointing-Pointer Steam condensation on walls has been investigated in the TOSQAN vessel. Black-Right-Pointing-Pointer Experiments on 7 different tests have been performed. Black-Right-Pointing-Pointer Different steam injections and wall temperatures are used. Black-Right-Pointing-Pointer Simulations are performed in 2D using the TONUS code. Black-Right-Pointing-Pointer Code-experiments comparisons at many different locations show a good agreement. - Abstract: During the course of a severe Pressurized Water Reactor accident, pressurization of the containment occurs and hydrogen can be produced by the reactor core oxidation and distributed in the containment according to convection flows and wall condensation. Filmwise wall condensation in the presence of non-condensable gases is a subject of many interests and extensive studies have been performed in the past. Some empirical correlations have demonstrated their limit for extrapolation under different thermal-hydraulic conditions and at different geometries/scales. The French Institute for Radiological Protection and Nuclear Safety (IRSN) has developed a numerical tool and an experimental facility in order to investigate free convection flows in the presence of condensation. The objective of this paper is to present numerical results obtained on different wall condensation tests in 7 m{sup 3} volume vessel (TOSQAN facility), and to compare them with the experimental ones. Over eight tests are considered here, and code-experiment comparison is performed on many different locations, giving an extensive insight of the code assessment for air-steam mixture flows involving wall condensation in the presence of non-condensable gases.
CONDOR: a database resource of developmentally associated conserved non-coding elements
Directory of Open Access Journals (Sweden)
Smith Sarah
2007-08-01
Full Text Available Abstract Background Comparative genomics is currently one of the most popular approaches to study the regulatory architecture of vertebrate genomes. Fish-mammal genomic comparisons have proved powerful in identifying conserved non-coding elements likely to be distal cis-regulatory modules such as enhancers, silencers or insulators that control the expression of genes involved in the regulation of early development. The scientific community is showing increasing interest in characterizing the function, evolution and language of these sequences. Despite this, there remains little in the way of user-friendly access to a large dataset of such elements in conjunction with the analysis and the visualization tools needed to study them. Description Here we present CONDOR (COnserved Non-coDing Orthologous Regions available at: http://condor.fugu.biology.qmul.ac.uk. In an interactive and intuitive way the website displays data on > 6800 non-coding elements associated with over 120 early developmental genes and conserved across vertebrates. The database regularly incorporates results of ongoing in vivo zebrafish enhancer assays of the CNEs carried out in-house, which currently number ~100. Included and highlighted within this set are elements derived from duplication events both at the origin of vertebrates and more recently in the teleost lineage, thus providing valuable data for studying the divergence of regulatory roles between paralogs. CONDOR therefore provides a number of tools and facilities to allow scientists to progress in their own studies on the function and evolution of developmental cis-regulation. Conclusion By providing access to data with an approachable graphics interface, the CONDOR database presents a rich resource for further studies into the regulation and evolution of genes involved in early development.
Intracoin - International Nuclide Transport Code Intercomparison Study
International Nuclear Information System (INIS)
1984-09-01
The purpose of the project is to obtain improved knowledge of the influence of various strategies for radionuclide transport modelling for the safety assessment of final repositories for nuclear waste. This is a report of the first phase of the project which was devoted to a comparison of the numerical accuracy of the computer codes used in the study. The codes can be divided into five groups, namely advection-dispersion models, models including matrix diffusion and chemical effects and finally combined models. The results are presented as comparisons of calculations since the objective of level 1 was code verification. (G.B.)
An Efficient Method for Verifying Gyrokinetic Microstability Codes
Bravenec, R.; Candy, J.; Dorland, W.; Holland, C.
2009-11-01
Benchmarks for gyrokinetic microstability codes can be developed through successful ``apples-to-apples'' comparisons among them. Unlike previous efforts, we perform the comparisons for actual discharges, rendering the verification efforts relevant to existing experiments and future devices (ITER). The process requires i) assembling the experimental analyses at multiple times, radii, discharges, and devices, ii) creating the input files ensuring that the input parameters are faithfully translated code-to-code, iii) running the codes, and iv) comparing the results, all in an organized fashion. The purpose of this work is to automate this process as much as possible: At present, a python routine is used to generate and organize GYRO input files from TRANSP or ONETWO analyses. Another routine translates the GYRO input files into GS2 input files. (Translation software for other codes has not yet been written.) Other python codes submit the multiple GYRO and GS2 jobs, organize the results, and collect them into a table suitable for plotting. (These separate python routines could easily be consolidated.) An example of the process -- a linear comparison between GYRO and GS2 for a DIII-D discharge at multiple radii -- will be presented.
Optix: A Monte Carlo scintillation light transport code
Energy Technology Data Exchange (ETDEWEB)
Safari, M.J., E-mail: mjsafari@aut.ac.ir [Department of Energy Engineering and Physics, Amir Kabir University of Technology, PO Box 15875-4413, Tehran (Iran, Islamic Republic of); Afarideh, H. [Department of Energy Engineering and Physics, Amir Kabir University of Technology, PO Box 15875-4413, Tehran (Iran, Islamic Republic of); Ghal-Eh, N. [School of Physics, Damghan University, PO Box 36716-41167, Damghan (Iran, Islamic Republic of); Davani, F. Abbasi [Nuclear Engineering Department, Shahid Beheshti University, PO Box 1983963113, Tehran (Iran, Islamic Republic of)
2014-02-11
The paper reports on the capabilities of Monte Carlo scintillation light transport code Optix, which is an extended version of previously introduced code Optics. Optix provides the user a variety of both numerical and graphical outputs with a very simple and user-friendly input structure. A benchmarking strategy has been adopted based on the comparison with experimental results, semi-analytical solutions, and other Monte Carlo simulation codes to verify various aspects of the developed code. Besides, some extensive comparisons have been made against the tracking abilities of general-purpose MCNPX and FLUKA codes. The presented benchmark results for the Optix code exhibit promising agreements. -- Highlights: • Monte Carlo simulation of scintillation light transport in 3D geometry. • Evaluation of angular distribution of detected photons. • Benchmark studies to check the accuracy of Monte Carlo simulations.
Stars with shell energy sources. Part 1. Special evolutionary code
International Nuclear Information System (INIS)
Rozyczka, M.
1977-01-01
A new version of the Henyey-type stellar evolution code is described and tested. It is shown, as a by-product of the tests, that the thermal time scale of the core of a red giant approaching the helium flash is of the order of the evolutionary time scale. The code itself appears to be a very efficient tool for investigations of the helium flash, carbon flash and the evolution of a white dwarf accreting mass. (author)
International Nuclear Information System (INIS)
Motoyama, Kazutaka; Morata, Oscar; Hasegawa, Tatsuhiko; Shang, Hsien; Krasnopolsky, Ruben
2015-01-01
A two-dimensional hydrochemical hybrid code, KM2, is constructed to deal with astrophysical problems that would require coupled hydrodynamical and chemical evolution. The code assumes axisymmetry in a cylindrical coordinate system and consists of two modules: a hydrodynamics module and a chemistry module. The hydrodynamics module solves hydrodynamics using a Godunov-type finite volume scheme and treats included chemical species as passively advected scalars. The chemistry module implicitly solves nonequilibrium chemistry and change of energy due to thermal processes with transfer of external ultraviolet radiation. Self-shielding effects on photodissociation of CO and H 2 are included. In this introductory paper, the adopted numerical method is presented, along with code verifications using the hydrodynamics module and a benchmark on the chemistry module with reactions specific to a photon-dominated region (PDR). Finally, as an example of the expected capability, the hydrochemical evolution of a PDR is presented based on the PDR benchmark
An axisymmetric evolution code for the Einstein equations on hyperboloidal slices
International Nuclear Information System (INIS)
Rinne, Oliver
2010-01-01
We present the first stable dynamical numerical evolutions of the Einstein equations in terms of a conformally rescaled metric on hyperboloidal hypersurfaces extending to future null infinity. Axisymmetry is imposed in order to reduce the computational cost. The formulation is based on an earlier axisymmetric evolution scheme, adapted to time slices of constant mean curvature. Ideas from a previous study by Moncrief and the author are applied in order to regularize the formally singular evolution equations at future null infinity. Long-term stable and convergent evolutions of Schwarzschild spacetime are obtained, including a gravitational perturbation. The Bondi news function is evaluated at future null infinity.
A GFR benchmark comparison of transient analysis codes based on the ETDR concept
International Nuclear Information System (INIS)
Bubelis, E.; Coddington, P.; Castelliti, D.; Dor, I.; Fouillet, C.; Geus, E. de; Marshall, T.D.; Van Rooijen, W.; Schikorr, M.; Stainsby, R.
2007-01-01
A GFR (Gas-cooled Fast Reactor) transient benchmark study was performed to investigate the ability of different code systems to calculate the transition in the core heat removal from the main circuit forced flow to natural circulation cooling using the Decay Heat Removal (DHR) system. This benchmark is based on a main blower failure in the Experimental Technology Demonstration Reactor (ETDR) with reactor scram. The codes taking part into the benchmark are: RELAP5, TRAC/AAA, CATHARE, SIM-ADS, MANTA and SPECTRA. For comparison purposes the benchmark was divided into several stages: the initial steady-state solution, the main blower flow run-down, the opening of the DHR loop and the transition to natural circulation and finally the 'quasi' steady heat removal from the core by the DHR system. The results submitted by the participants showed that all the codes gave consistent results for all four stages of the benchmark. In the steady-state the calculations revealed some differences in the clad and fuel temperatures, the core and main loop pressure drops and in the total Helium mass inventory. Also some disagreements were observed in the Helium and water flow rates in the DHR loop during the final natural circulation stage. Good agreement was observed for the total main blower flow rate and Helium temperature rise in the core, as well as for the Helium inlet temperature into the core. In order to understand the reason for the differences in the initial 'blind' calculations a second round of calculations was performed using a more precise set of boundary conditions
Reliability of cause of death coding: an international comparison.
Antini, Carmen; Rajs, Danuta; Muñoz-Quezada, María Teresa; Mondaca, Boris Andrés Lucero; Heiss, Gerardo
2015-07-01
This study evaluates the agreement of nosologic coding of cardiovascular causes of death between a Chilean coder and one in the United States, in a stratified random sample of death certificates of persons aged ≥ 60, issued in 2008 in the Valparaíso and Metropolitan regions, Chile. All causes of death were converted to ICD-10 codes in parallel by both coders. Concordance was analyzed with inter-coder agreement and Cohen's kappa coefficient by level of specification ICD-10 code for the underlying cause and the total causes of death coding. Inter-coder agreement was 76.4% for all causes of death and 80.6% for the underlying cause (agreement at the four-digit level), with differences by the level of specification of the ICD-10 code, by line of the death certificate, and by number of causes of death per certificate. Cohen's kappa coefficient was 0.76 (95%CI: 0.68-0.84) for the underlying cause and 0.75 (95%CI: 0.74-0.77) for the total causes of death. In conclusion, causes of death coding and inter-coder agreement for cardiovascular diseases in two regions of Chile are comparable to an external benchmark and with reports from other countries.
International Nuclear Information System (INIS)
Woodruff, W. L.
1998-01-01
The dusty old source code in WIMS-D4M has been completely rewritten to conform more closely with current FORTRAN coding practices. The revised code contains many improvements in appearance, error checking and in control of the output. The output is now tabulated to fit the typical 80 column window or terminal screen. The Segev method for resonance integral interpolation is now an option. Most of the dimension limitations have been removed and replaced with variable dimensions within a compile-time fixed container. The library is no longer restricted to the 69 energy group structure, and two new libraries have been generated for use with the code. The new libraries are both based on ENDF/B-VI data with one having the original 69 energy group structure and the second with a 172 group structure. The common source code can be used with PCs using both Windows 95 and NT, with a Linux based operating system and with UNIX based workstations. Comparisons of this version of the code to earlier evaluations with ENDF/B-V are provided, as well as, comparisons with the new libraries
International Nuclear Information System (INIS)
Woodruff, W.L.; Leopando, L.S.
1998-01-01
The dusty old source code in WIMS-D4M has been completely rewritten to conform more closely with current FORTRAN coding practices. The revised code contains many improvements in appearance, error checking and in control of the output. The output is now tabulated to fit the typical 80 column window or terminal screen. The Segev method for resonance integral interpolation is now an option. Most of the dimension limitations have been removed and replaced with variable dimensions within a compile-time fixed container. The library is no longer restricted to the 69 energy group structure, and two new libraries have been generated for use with the code. The new libraries are both based on ENDF/B-VI data with one having the original 69 energy group structure and the second with a 172 group structure. The common source code can be used with PCs using both Windows 95 and NT, with a Linux based operating system and with UNIX based workstations. Comparisons of this version of the code to earlier evaluations with ENDF/B-V are provided, as well as, comparisons with the new libraries. (author)
A comparison of biological and cultural evolution
Indian Academy of Sciences (India)
the intellectual and moral characters of man have emerged as results of biological ..... tural selection is at least partly based on conscious action. In cultural evolution .... Transfer of information in biological and cultural evolution. In biological.
An Analysis of the Changes in Communication Techniques in the Italian Codes of Medical Deontology.
Conti, Andrea Alberto
2017-04-28
The code of deontology of the Italian National Federation of the Colleges of Physicians, Surgeons and Dentists (FNOMCeO) contains the principles and rules to which the professional medical practitioner must adhere. This work identifies and analyzes the medical-linguistic choices and the expressive techniques present in the different editions of the code, and evaluates their purpose and function, focusing on the first appearance and the subsequent frequency of key terms. Various aspects of the formal and expressive revisions of the eight editions of the Codes of Medical Deontology published after the Second World War (from 1947/48 to 2014) are here presented, starting from a brief comparison with the first edition of 1903. Formal characteristics, choices of medical terminology and the introduction of new concepts and communicative attitudes are here identified and evaluated. This paper, in presenting a quantitative and epistemological analysis of variations, modifications and confirmations in the different editions of the Italian code of medical deontology over the last century, enucleates and demonstrates the dynamic paradigm of changing attitudes in the medical profession. This analysis shows the evolution in medical-scientific communication as embodied in the Italian code of medical deontology. This code, in its adoption, changes and adaptations, as evidenced in its successive editions, bears witness to the expressions and attitudes pertinent to and characteristic of the deontological stance of the medical profession during the twentieth century.
Nonlinear evolution of MHD instabilities
International Nuclear Information System (INIS)
Bateman, G.; Hicks, H.R.; Wooten, J.W.; Dory, R.A.
1975-01-01
A 3-D nonlinear MHD computer code was used to study the time evolution of internal instabilities. Velocity vortex cells are observed to persist into the nonlinear evolution. Pressure and density profiles convect around these cells for a weak localized instability, or convect into the wall for a strong instability. (U.S.)
Both noncoding and protein-coding RNAs contribute to gene expression evolution in the primate brain.
Babbitt, Courtney C; Fedrigo, Olivier; Pfefferle, Adam D; Boyle, Alan P; Horvath, Julie E; Furey, Terrence S; Wray, Gregory A
2010-01-18
Despite striking differences in cognition and behavior between humans and our closest primate relatives, several studies have found little evidence for adaptive change in protein-coding regions of genes expressed primarily in the brain. Instead, changes in gene expression may underlie many cognitive and behavioral differences. Here, we used digital gene expression: tag profiling (here called Tag-Seq, also called DGE:tag profiling) to assess changes in global transcript abundance in the frontal cortex of the brains of 3 humans, 3 chimpanzees, and 3 rhesus macaques. A substantial fraction of transcripts we identified as differentially transcribed among species were not assayed in previous studies based on microarrays. Differentially expressed tags within coding regions are enriched for gene functions involved in synaptic transmission, transport, oxidative phosphorylation, and lipid metabolism. Importantly, because Tag-Seq technology provides strand-specific information about all polyadenlyated transcripts, we were able to assay expression in noncoding intragenic regions, including both sense and antisense noncoding transcripts (relative to nearby genes). We find that many noncoding transcripts are conserved in both location and expression level between species, suggesting a possible functional role. Lastly, we examined the overlap between differential gene expression and signatures of positive selection within putative promoter regions, a sign that these differences represent adaptations during human evolution. Comparative approaches may provide important insights into genes responsible for differences in cognitive functions between humans and nonhuman primates, as well as highlighting new candidate genes for studies investigating neurological disorders.
A combined N-body and hydrodynamic code for modeling disk galaxies
International Nuclear Information System (INIS)
Schroeder, M.C.
1989-01-01
A combined N-body and hydrodynamic computer code for the modeling of two dimensional galaxies is described. The N-body portion of the code is used to calculate the motion of the particle component of a galaxy, while the hydrodynamics portion of the code is used to follow the motion and evolution of the fluid component. A complete description of the numerical methods used for each portion of the code is given. Additionally, the proof tests of the separate and combined portions of the code are presented and discussed. Finally, a discussion of the topics researched with the code and results obtained is presented. These include: the measurement of stellar relaxation times in disk galaxy simulations; the effects of two-armed spiral perturbations on stable axisymmetric disks; the effects of the inclusion of an instellar medium (ISM) on the stability of disk galaxies; and the effect of the inclusion of stellar evolution on disk galaxy simulations
Biased Gene Conversion and GC-Content Evolution in the Coding Sequences of Reptiles and Vertebrates
Figuet, Emeric; Ballenghien, Marion; Romiguier, Jonathan; Galtier, Nicolas
2015-01-01
Mammalian and avian genomes are characterized by a substantial spatial heterogeneity of GC-content, which is often interpreted as reflecting the effect of local GC-biased gene conversion (gBGC), a meiotic repair bias that favors G and C over A and T alleles in high-recombining genomic regions. Surprisingly, the first fully sequenced nonavian sauropsid (i.e., reptile), the green anole Anolis carolinensis, revealed a highly homogeneous genomic GC-content landscape, suggesting the possibility that gBGC might not be at work in this lineage. Here, we analyze GC-content evolution at third-codon positions (GC3) in 44 vertebrates species, including eight newly sequenced transcriptomes, with a specific focus on nonavian sauropsids. We report that reptiles, including the green anole, have a genome-wide distribution of GC3 similar to that of mammals and birds, and we infer a strong GC3-heterogeneity to be already present in the tetrapod ancestor. We further show that the dynamic of coding sequence GC-content is largely governed by karyotypic features in vertebrates, notably in the green anole, in agreement with the gBGC hypothesis. The discrepancy between third-codon positions and noncoding DNA regarding GC-content dynamics in the green anole could not be explained by the activity of transposable elements or selection on codon usage. This analysis highlights the unique value of third-codon positions as an insertion/deletion-free marker of nucleotide substitution biases that ultimately affect the evolution of proteins. PMID:25527834
Directory of Open Access Journals (Sweden)
Maggi Giorgio P
2008-06-01
Full Text Available Abstract Background The accurate detection of genes and the identification of functional regions is still an open issue in the annotation of genomic sequences. This problem affects new genomes but also those of very well studied organisms such as human and mouse where, despite the great efforts, the inventory of genes and regulatory regions is far from complete. Comparative genomics is an effective approach to address this problem. Unfortunately it is limited by the computational requirements needed to perform genome-wide comparisons and by the problem of discriminating between conserved coding and non-coding sequences. This discrimination is often based (thus dependent on the availability of annotated proteins. Results In this paper we present the results of a comprehensive comparison of human and mouse genomes performed with a new high throughput grid-based system which allows the rapid detection of conserved sequences and accurate assessment of their coding potential. By detecting clusters of coding conserved sequences the system is also suitable to accurately identify potential gene loci. Following this analysis we created a collection of human-mouse conserved sequence tags and carefully compared our results to reliable annotations in order to benchmark the reliability of our classifications. Strikingly we were able to detect several potential gene loci supported by EST sequences but not corresponding to as yet annotated genes. Conclusion Here we present a new system which allows comprehensive comparison of genomes to detect conserved coding and non-coding sequences and the identification of potential gene loci. Our system does not require the availability of any annotated sequence thus is suitable for the analysis of new or poorly annotated genomes.
Nondestructive testing standards and the ASME code
International Nuclear Information System (INIS)
Spanner, J.C.
1991-04-01
Nondestructive testing (NDT) requirements and standards are an important part of the ASME Boiler and Pressure Vessel Code. In this paper, the evolution of these requirements and standards is reviewed in the context of the unique technical and legal stature of the ASME Code. The coherent and consistent manner by which the ASME Code rules are organized is described, and the interrelationship between the various ASME Code sections, the piping codes, and the ASTM Standards is discussed. Significant changes occurred in ASME Sections 5 and 11 during the 1980s, and these are highlighted along with projections and comments regarding future trends and changes in these important documents. 4 refs., 8 tabs
CATHARE code development and assessment methodologies
International Nuclear Information System (INIS)
Micaelli, J.C.; Barre, F.; Bestion, D.
1995-01-01
The CATHARE thermal-hydraulic code has been developed jointly by Commissariat a l'Energie Atomique (CEA), Electricite de France (EdF), and Framatorne for safety analysis. Since the beginning of the project (September 1979), development and assessment activities have followed a methodology supported by two series of experimental tests: separate effects tests and integral effects tests. The purpose of this paper is to describe this methodology, the code assessment status, and the evolution to take into account two new components of this program: the modeling of three-dimensional phenomena and the requirements of code uncertainty evaluation
Genomic comparison of closely related Giant Viruses supports an accordion-like model of evolution.
Directory of Open Access Journals (Sweden)
Jonathan eFilée
2015-06-01
Full Text Available Genome gigantism occurs so far in Phycodnaviridae and Mimiviridae (order Megavirales. Origin and evolution of these Giant Viruses (GVs remain open questions. Interestingly, availability of a collection of closely related GV genomes enabling genomic comparisons offer the opportunity to better understand the different evolutionary forces acting on these genomes. Whole genome alignment for 5 groups of viruses belonging to the Mimiviridae and Phycodnaviridae families show that there is no trend of genome expansion or general tendency of genome contraction. Instead, GV genomes accumulated genomic mutations over the time with gene gains compensating the different losses. In addition, each lineage displays specific patterns of genome evolution. Mimiviridae (megaviruses and mimiviruses and Chlorella Phycodnaviruses evolved mainly by duplications and losses of genes belonging to large paralogous families (including movements of diverse mobiles genetic elements, whereas Micromonas and Ostreococcus Phycodnaviruses derive most of their genetic novelties thought lateral gene transfers. Taken together, these data support an accordion-like model of evolution in which GV genomes have undergone successive steps of gene gain and gene loss, accrediting the hypothesis that genome gigantism appears early, before the diversification of the different GV lineages.
Genomic comparison of closely related Giant Viruses supports an accordion-like model of evolution.
Filée, Jonathan
2015-01-01
Genome gigantism occurs so far in Phycodnaviridae and Mimiviridae (order Megavirales). Origin and evolution of these Giant Viruses (GVs) remain open questions. Interestingly, availability of a collection of closely related GV genomes enabling genomic comparisons offer the opportunity to better understand the different evolutionary forces acting on these genomes. Whole genome alignment for five groups of viruses belonging to the Mimiviridae and Phycodnaviridae families show that there is no trend of genome expansion or general tendency of genome contraction. Instead, GV genomes accumulated genomic mutations over the time with gene gains compensating the different losses. In addition, each lineage displays specific patterns of genome evolution. Mimiviridae (megaviruses and mimiviruses) and Chlorella Phycodnaviruses evolved mainly by duplications and losses of genes belonging to large paralogous families (including movements of diverse mobiles genetic elements), whereas Micromonas and Ostreococcus Phycodnaviruses derive most of their genetic novelties thought lateral gene transfers. Taken together, these data support an accordion-like model of evolution in which GV genomes have undergone successive steps of gene gain and gene loss, accrediting the hypothesis that genome gigantism appears early, before the diversification of the different GV lineages.
Analysis of Iterated Hard Decision Decoding of Product Codes with Reed-Solomon Component Codes
DEFF Research Database (Denmark)
Justesen, Jørn; Høholdt, Tom
2007-01-01
Products of Reed-Solomon codes are important in applications because they offer a combination of large blocks, low decoding complexity, and good performance. A recent result on random graphs can be used to show that with high probability a large number of errors can be corrected by iterating...... minimum distance decoding. We present an analysis related to density evolution which gives the exact asymptotic value of the decoding threshold and also provides a closed form approximation to the distribution of errors in each step of the decoding of finite length codes....
Lebreton, Yveline; Montalbán, Josefina; Christensen-Dalsgaard, Jørgen; Roxburgh, Ian W.; Weiss, Achim
2008-08-01
We compare stellar models produced by different stellar evolution codes for the CoRoT/ESTA project, comparing their global quantities, their physical structure, and their oscillation properties. We discuss the differences between models and identify the underlying reasons for these differences. The stellar models are representative of potential CoRoT targets. Overall we find very good agreement between the five different codes, but with some significant deviations. We find noticeable discrepancies (though still at the per cent level) that result from the handling of the equation of state, of the opacities and of the convective boundaries. The results of our work will be helpful in interpreting future asteroseismology results from CoRoT.
Reference results for time-like evolution up to
Bertone, Valerio; Carrazza, Stefano; Nocera, Emanuele R.
2015-03-01
We present high-precision numerical results for time-like Dokshitzer-Gribov-Lipatov-Altarelli-Parisi evolution in the factorisation scheme, for the first time up to next-to-next-to-leading order accuracy in quantum chromodynamics. First, we scrutinise the analytical expressions of the splitting functions available in the literature, in both x and N space, and check their mutual consistency. Second, we implement time-like evolution in two publicly available, entirely independent and conceptually different numerical codes, in x and N space respectively: the already existing APFEL code, which has been updated with time-like evolution, and the new MELA code, which has been specifically developed to perform the study in this work. Third, by means of a model for fragmentation functions, we provide results for the evolution in different factorisation schemes, for different ratios between renormalisation and factorisation scales and at different final scales. Our results are collected in the format of benchmark tables, which could be used as a reference for global determinations of fragmentation functions in the future.
International assessment of PCA codes
International Nuclear Information System (INIS)
Neymotin, L.; Lui, C.; Glynn, J.; Archarya, S.
1993-11-01
Over the past three years (1991-1993), an extensive international exercise for intercomparison of a group of six Probabilistic Consequence Assessment (PCA) codes was undertaken. The exercise was jointly sponsored by the Commission of European Communities (CEC) and OECD Nuclear Energy Agency. This exercise was a logical continuation of a similar effort undertaken by OECD/NEA/CSNI in 1979-1981. The PCA codes are currently used by different countries for predicting radiological health and economic consequences of severe accidents at nuclear power plants (and certain types of non-reactor nuclear facilities) resulting in releases of radioactive materials into the atmosphere. The codes participating in the exercise were: ARANO (Finland), CONDOR (UK), COSYMA (CEC), LENA (Sweden), MACCS (USA), and OSCAAR (Japan). In parallel with this inter-code comparison effort, two separate groups performed a similar set of calculations using two of the participating codes, MACCS and COSYMA. Results of the intercode and inter-MACCS comparisons are presented in this paper. The MACCS group included four participants: GREECE: Institute of Nuclear Technology and Radiation Protection, NCSR Demokritos; ITALY: ENEL, ENEA/DISP, and ENEA/NUC-RIN; SPAIN: Universidad Politecnica de Madrid (UPM) and Consejo de Seguridad Nuclear; USA: Brookhaven National Laboratory, US NRC and DOE
Translation of ARAC computer codes
International Nuclear Information System (INIS)
Takahashi, Kunio; Chino, Masamichi; Honma, Toshimitsu; Ishikawa, Hirohiko; Kai, Michiaki; Imai, Kazuhiko; Asai, Kiyoshi
1982-05-01
In 1981 we have translated the famous MATHEW, ADPIC and their auxiliary computer codes for CDC 7600 computer version to FACOM M-200's. The codes consist of a part of the Atmospheric Release Advisory Capability (ARAC) system of Lawrence Livermore National Laboratory (LLNL). The MATHEW is a code for three-dimensional wind field analysis. Using observed data, it calculates the mass-consistent wind field of grid cells by a variational method. The ADPIC is a code for three-dimensional concentration prediction of gases and particulates released to the atmosphere. It calculates concentrations in grid cells by the particle-in-cell method. They are written in LLLTRAN, i.e., LLNL Fortran language and are implemented on the CDC 7600 computers of LLNL. In this report, i) the computational methods of the MATHEW/ADPIC and their auxiliary codes, ii) comparisons of the calculated results with our JAERI particle-in-cell, and gaussian plume models, iii) translation procedures from the CDC version to FACOM M-200's, are described. Under the permission of LLNL G-Division, this report is published to keep the track of the translation procedures and to serve our JAERI researchers for comparisons and references of their works. (author)
International Nuclear Information System (INIS)
Bae, S. W.; Chung, B. D.
2010-07-01
This report records the results of the code validation for the one-dimensional module of the MARS-KS thermal hydraulics analysis code by means of result-comparison with the RELAP5/MOD3.3 computer code. For the validation calculations, simulations of the RELAP5 Code Developmental Assessment Problem, which consists of 22 simulation problems in 3 categories, have been selected. The results of the 3 categories of simulations demonstrate that the one-dimensional module of the MARS code and the RELAP5/MOD3.3 code are essentially the same code. This is expected as the two codes have basically the same set of field equations, constitutive equations and main thermal hydraulic models. The result suggests that the high level of code validity of the RELAP5/MOD3.3 can be directly applied to the MARS one-dimensional module
A comparison of biological and cultural evolution
Indian Academy of Sciences (India)
2016-08-26
Aug 26, 2016 ... fitness; information; language; learning; teaching. ... Further, conditions for cultural evolution are proposed, including a suggestion for language being the cultural replicator corresponding to the concept of the gene in ... The importance of language as a necessary condition for cultural evolution is stressed.
Gasparini, N. M.; Hobley, D. E. J.; Tucker, G. E.; Istanbulluoglu, E.; Adams, J. M.; Nudurupati, S. S.; Hutton, E. W. H.
2014-12-01
Computational models are important tools that can be used to quantitatively understand the evolution of real landscapes. Commonalities exist among most landscape evolution models, although they are also idiosyncratic, in that they are coded in different languages, require different input values, and are designed to tackle a unique set of questions. These differences can make applying a landscape evolution model challenging, especially for novice programmers. In this study, we compare and contrast two landscape evolution models that are designed to tackle similar questions, but the actual model designs are quite different. The first model, CHILD, is over a decade-old and is relatively well-tested, well-developed and well-used. It is coded in C++, operates on an irregular grid and was designed more with function rather than user-experience in mind. In contrast, the second model, Landlab, is relatively new and was designed to be accessible to a wide range of scientists, including those who have not previously used or developed a numerical model. Landlab is coded in Python, a relatively easy language for the non-proficient programmer, and has the ability to model landscapes described on both regular and irregular grids. We present landscape simulations from both modeling platforms. Our goal is to illustrate best practices for implementing a new process module in a landscape evolution model, and therefore the simulations are applicable regardless of the modeling platform. We contrast differences and highlight similarities between the use of the two models, including setting-up the model and input file for different evolutionary scenarios, computational time, and model output. Whenever possible, we compare model output with analytical solutions and illustrate the effects, or lack thereof, of a uniform vs. non-uniform grid. Our simulations focus on implementing a single process, including detachment-limited or transport-limited fluvial bedrock incision and linear or non
Combining NNPDF3.0 and NNPDF2.3QED through the APFEL evolution code
Bertone, Valerio
2016-01-01
We present sets of parton distribution functions (PDFs), based on the NNPDF3.0 family, which include the photon PDF from the NNPDF2.3QED sets, and leading-order QED contributions to the DGLAP evolution as implemented in the public code APFEL. The aim is to combine our state-of-the-art determination of quark and gluon PDFs with the so far only direct determination of the photon PDF from LHC data. In addition, the use of APFEL allowed us to employ a solution of the DGLAP equation that, differently from that used for the NNPDF2.3QED sets, includes QED corrections in a more accurate way. We briefly discuss how these sets are constructed and investigate the effect of the inclusion of the QED corrections on PDFs and parton luminosities. Finally, we compare the resulting sets, which we dubbed NNPDF3.0QED, to the older NNPDF2.3QED sets and to all presently available PDF sets that include QED corrections, namely CT14QED and MRST2004QED.
Simulations of the neutronic REP behaviour using the codes DRAGON/DONJON
International Nuclear Information System (INIS)
Le Mer, J.
2007-01-01
Neutron flux calculation is necessary to understand how a nuclear reactor works. This flux is derived from the transport equation on the whole core. Because of its really complex structure and the angular dependence of the transport equation, it is impossible to compute the flux directly and several neutronic calculation codes must be used to solve the equation for different discretizations which require different modelisations. This chain of successive models, known as a calculation scheme, compute the neutron flux of a reactor from its geometry, its isotopic compositions and a cross-section library. Pressurised light Water Reactor (PWR) are the most common nuclear reactor used today. It is necessary for each neutronic code to be validated for this type of reactor. The goal of this work is to create a complete calculation scheme which can be applied to the evolution of the core of a pressurised light water nuclear reactor using the lattice code DRAGON and the reactor code DONJON. Each step of this scheme will be validated by comparisons with other codes or with experimental results. The unit cell calculation will be computed for a benchmark submitted by R. Mosteller. The assembly calculations will be used to compare the results given by DRAGON, APOLLO2 and MCNP for an assembly used by EDF for code testing. The core calculations will show that the codes DRAGON and DONJON can produce accurate macroscopic results for a real core. Those studies will be used to show the effects of many factors on the flux distribution including the cross section library, the number of energy groups, spatial discretization of the unit cell, the tracking model, the self-shielding of the resonant isotopes or the burnup steps. (author)
Fast comparison of IS radar code sequences for lag profile inversion
Directory of Open Access Journals (Sweden)
M. S. Lehtinen
2008-08-01
Full Text Available A fast method for theoretically comparing the posteriori variances produced by different phase code sequences in incoherent scatter radar (ISR experiments is introduced. Alternating codes of types 1 and 2 are known to be optimal for selected range resolutions, but the code sets are inconveniently long for many purposes like ground clutter estimation and in cases where coherent echoes from lower ionospheric layers are to be analyzed in addition to standard F-layer spectra.
The method is used in practice for searching binary code quads that have estimation accuracy almost equal to that of much longer alternating code sets. Though the code sequences can consist of as few as four different transmission envelopes, the lag profile estimation variances are near to the theoretical minimum. Thus the short code sequence is equally good as a full cycle of alternating codes with the same pulse length and bit length. The short code groups cannot be directly decoded, but the decoding is done in connection with more computationally expensive lag profile inversion in data analysis.
The actual code searches as well as the analysis and real data results from the found short code searches are explained in other papers sent to the same issue of this journal. We also discuss interesting subtle differences found between the different alternating codes by this method. We assume that thermal noise dominates the incoherent scatter signal.
Chemical evolution coefficients for the study of galactic evolution
International Nuclear Information System (INIS)
Mallik, D.C.V.
1980-01-01
A new evaluation of chemical evolution coefficients has been made using recent stellar evolution and nucleosynthesis data. The role of the low and intermediate mass stars in galactic nuclosynthesis has been emphasized. A significant amount of 4 He, 12 C and neutron-rich species is found to be contributed by these stars. Comparison with observed abundances suggests a primary origin of 14 N. The simple model of galactic evolution with the new coefficients has been used to derive the ratio of helium to heavy element enrichment in the Galaxy. The new stellar evolution data do not explain the large value of this ratio that has been determined observationally. (orig.)
Chemical evolution coefficients for the study of galactic evolution
Energy Technology Data Exchange (ETDEWEB)
Mallik, D C.V. [Indian Inst. of Astrophysics, Bangalore
1980-05-01
A new evaluation of chemical evolution coefficients has been made using recent stellar evolution and nucleosynthesis data. The role of the low and intermediate mass stars in galactic nucleosynthesis has been emphasized. A significant amount of /sup 4/He, /sup 12/C and neutron-rich species is found to be contributed by these stars. Comparison with observed abundances suggests a primary origin of /sup 14/N. The simple model of galactic evolution with the new coefficients has been used to derive the ratio of helium to heavy element enrichment in the Galaxy. The new stellar evolution data do not explain the large value of this ratio that has been determined observationally.
Status of the CONTAIN computer code for LWR containment analysis
International Nuclear Information System (INIS)
Bergeron, K.D.; Murata, K.K.; Rexroth, P.E.; Clauser, M.J.; Senglaub, M.E.; Sciacca, F.W.; Trebilcock, W.
1983-01-01
The current status of the CONTAIN code for LWR safety analysis is reviewed. Three example calculations are discussed as illustrations of the code's capabilities: (1) a demonstration of the spray model in a realistic PWR problem, and a comparison with CONTEMPT results; (2) a comparison of CONTAIN results for a major aerosol experiment against experimental results and predictions of the HAARM aerosol code; and (3) an LWR sample problem, involving a TMLB' sequence for the Zion reactor containment
Status of the CONTAIN computer code for LWR containment analysis
International Nuclear Information System (INIS)
Bergeron, K.D.; Murata, K.K.; Rexroth, P.E.; Clauser, M.J.; Senglaub, M.E.; Sciacca, F.W.; Trebilcock, W.
1982-01-01
The current status of the CONTAIN code for LWR safety analysis is reviewed. Three example calculations are discussed as illustrations of the code's capabilities: (1) a demonstration of the spray model in a realistic PWR problem, and a comparison with CONTEMPT results; (2) a comparison of CONTAIN results for a major aerosol experiment against experimental results and predictions of the HAARM aerosol code; and (3) an LWR sample problem, involving a TMLB' sequence for the Zion reactor containment
OPAL reactor calculations using the Monte Carlo code serpent
Energy Technology Data Exchange (ETDEWEB)
Ferraro, Diego; Villarino, Eduardo [Nuclear Engineering Dept., INVAP S.E., Rio Negro (Argentina)
2012-03-15
In the present work the Monte Carlo cell code developed by VTT Serpent v1.1.14 is used to model the MTR fuel assemblies (FA) and control rods (CR) from OPAL (Open Pool Australian Light-water) reactor in order to obtain few-group constants with burnup dependence to be used in the already developed reactor core models. These core calculations are performed using CITVAP 3-D diffusion code, which is well-known reactor code based on CITATION. Subsequently the results are compared with those obtained by the deterministic calculation line used by INVAP, which uses the Collision Probability Condor cell-code to obtain few-group constants. Finally the results are compared with the experimental data obtained from the reactor information for several operation cycles. As a result several evaluations are performed, including a code to code cell comparison at cell and core level and calculation-experiment comparison at core level in order to evaluate the Serpent code actual capabilities. (author)
Gap Conductance model Validation in the TASS/SMR-S code using MARS code
International Nuclear Information System (INIS)
Ahn, Sang Jun; Yang, Soo Hyung; Chung, Young Jong; Lee, Won Jae
2010-01-01
Korea Atomic Energy Research Institute (KAERI) has been developing the TASS/SMR-S (Transient and Setpoint Simulation/Small and Medium Reactor) code, which is a thermal hydraulic code for the safety analysis of the advanced integral reactor. An appropriate work to validate the applicability of the thermal hydraulic models within the code should be demanded. Among the models, the gap conductance model which is describes the thermal gap conductivity between fuel and cladding was validated through the comparison with MARS code. The validation of the gap conductance model was performed by evaluating the variation of the gap temperature and gap width as the changed with the power fraction. In this paper, a brief description of the gap conductance model in the TASS/SMR-S code is presented. In addition, calculated results to validate the gap conductance model are demonstrated by comparing with the results of the MARS code with the test case
Cultural and biological evolution of phonemic speech
de Boer, B.; Freitas, A.A.; Capcarrere, M.S.; Bentley, Peter J.; Johnson, Colin G.; Timmis, Jon
2005-01-01
This paper investigates the interaction between cultural evolution and biological evolution in the emergence of phonemic coding in speech. It is observed that our nearest relatives, the primates, use holistic utterances, whereas humans use phonemic utterances. It can therefore be argued that our
Automatic schema evolution in Root
International Nuclear Information System (INIS)
Brun, R.; Rademakers, F.
2001-01-01
ROOT version 3 (spring 2001) supports automatic class schema evolution. In addition this version also produces files that are self-describing. This is achieved by storing in each file a record with the description of all the persistent classes in the file. Being self-describing guarantees that a file can always be read later, its structure browsed and objects inspected, also when the library with the compiled code of these classes is missing. The schema evolution mechanism supports the frequent case when multiple data sets generated with many different class versions must be analyzed in the same session. ROOT supports the automatic generation of C++ code describing the data objects in a file
International Nuclear Information System (INIS)
Kim, Sung Hyun; Moon, Chan Ki; Park, Sung Baek; Na, Man Gyun
2013-01-01
The RELAP5/MOD3 code introduced in cooperation with U. S. NRC has been utilized mainly for validation calculation of accident analysis submitted by licensee in Korea. The Korea Institute of Nuclear Safety has built a verification system of LWR accident analysis with RELAP5/MOD3 code engine. Therefore, the simulator replicates the design basis accident and its results are compared with RELAP5/MOD3 code results that will have important implications in the verification of the simulator in the future. The SGTR simulations were performed by the simulator and its results were compared with ones by RELAP5/MOD3 code in this study. Thus, the results of this study can be used as materials to build the verification system of the nuclear power plant simulator. We tried to compare with RELAP5/MOD3 verification code by replicating major parameters of steam generator tube rupture using the simulator for OPR-1000 in Yonggwang training center. By comparing the changes in temperature, pressure and inventory of the reactor coolant system and main steam system during the SGTR, it was confirmed that the main behaviors of SGTR which the simulator and RELAP5/MOD3 code showed are similar. However, the behavior of SG pressure and level that are important parameters to diagnose the accident were a little different. We estimated that RELAP5/MOD3 code was not reflected the major control systems in detail, such as FWCS, SBCS and PPCS. The different behaviors of SG level and pressure in this study should be needed an additional review. As a result of the comparison, the major simulation parameters behavior by RELAP5/MOD3 code agreed well with the one by the simulator. Therefore, it is thought that RELAP5/MOD3 code is used as a tool for validation of NPP simulator in the near future through this study
Fang, Lu; Shen, Bin; Irwin, David M; Zhang, Shuyi
2014-10-01
Glycogen synthase, which catalyzes the synthesis of glycogen, is especially important for Old World (Pteropodidae) and New World (Phyllostomidae) fruit bats that ingest high-carbohydrate diets. Glycogen synthase 1, encoded by the Gys1 gene, is the glycogen synthase isozyme that functions in muscles. To determine whether Gys1 has undergone adaptive evolution in bats with carbohydrate-rich diets, in comparison to insect-eating sister bat taxa, we sequenced the coding region of the Gys1 gene from 10 species of bats, including two Old World fruit bats (Pteropodidae) and a New World fruit bat (Phyllostomidae). Our results show no evidence for positive selection in the Gys1 coding sequence on the ancestral Old World and the New World Artibeus lituratus branches. Tests for convergent evolution indicated convergence of the sequences and one parallel amino acid substitution (T395A) was detected on these branches, which was likely driven by natural selection.
Bari, Md. S.; Das, T.
2013-09-01
Tectonic framework of Bangladesh and adjoining areas indicate that Bangladesh lies well within an active seismic zone. The after effect of earthquake is more severe in an underdeveloped and a densely populated country like ours than any other developed countries. Bangladesh National Building Code (BNBC) was first established in 1993 to provide guidelines for design and construction of new structure subject to earthquake ground motions in order to minimize the risk to life for all structures. A revision of BNBC 1993 is undergoing to make this up to date with other international building codes. This paper aims at the comparison of various provisions of seismic analysis as given in building codes of different countries. This comparison will give an idea regarding where our country stands when it comes to safety against earth quake. Primarily, various seismic parameters in BNBC 2010 (draft) have been studied and compared with that of BNBC 1993. Later, both 1993 and 2010 edition of BNBC codes have been compared graphically with building codes of other countries such as National Building Code of India 2005 (NBC-India 2005), American Society of Civil Engineering 7-05 (ASCE 7-05). The base shear/weight ratios have been plotted against the height of the building. The investigation in this paper reveals that BNBC 1993 has the least base shear among all the codes. Factored Base shear values of BNBC 2010 are found to have increased significantly than that of BNBC 1993 for low rise buildings (≤20 m) around the country than its predecessor. Despite revision of the code, BNBC 2010 (draft) still suggests less base shear values when compared to the Indian and American code. Therefore, this increase in factor of safety against the earthquake imposed by the proposed BNBC 2010 code by suggesting higher values of base shear is appreciable.
The static evolution of the new Italian code of medical ethics.
Montanari Vergallo, G; Busardò, F P; Zaami, S; Marinelli, E
2016-01-01
Eight years since the last revision, in May 2014 the Italian code of medical ethics has been updated. Here, the Authors examine the reform in the light of the increasing difficulties of the medical profession arising from the severity of the Italian law Courts. The most significant aspects of this new code are firstly, the patient's freedom of self-determination and secondly, risk prevention through the disclosure of errors and adverse events. However, in both areas the reform seems to be less effective if we compare the ethical codes of France, the United Kingdom and the United States. In particular, the non-taking into consideration of the said code quality standards and scientific evidence which should guide doctors in their clinical practice is to say the least questionable. Since these are the most significant changes in the new code, it seems inevitable to conclude that the 2014 edition is essentially in line with previous versions. Now more than ever it is necessary that medical ethics acknowledges that medicine, society and medical jurisprudence have changed and doctors must be given new rules in order to protect both patients' rights and dignity of the profession. The physician's right to refuse to perform treatment at odds with his own clinical beliefs cannot be the only mean to safeguard the dignity of the profession. A clear boundary must also be established between medicine and professionalism as well as the criteria in determining the scientific evidences that physicians must follow. This has not been done in the Italian code of ethics, despite all the controversy caused by the Stamina case.
G4-STORK: A Geant4-based Monte Carlo reactor kinetics simulation code
International Nuclear Information System (INIS)
Russell, Liam; Buijs, Adriaan; Jonkmans, Guy
2014-01-01
Highlights: • G4-STORK is a new, time-dependent, Monte Carlo code for reactor physics applications. • G4-STORK was built by adapting and expanding on the Geant4 Monte Carlo toolkit. • G4-STORK was designed to simulate short-term fluctuations in reactor cores. • G4-STORK is well suited for simulating sub- and supercritical assemblies. • G4-STORK was verified through comparisons with DRAGON and MCNP. - Abstract: In this paper we introduce G4-STORK (Geant4 STOchastic Reactor Kinetics), a new, time-dependent, Monte Carlo particle tracking code for reactor physics applications. G4-STORK was built by adapting and expanding on the Geant4 Monte Carlo toolkit. The toolkit provides the fundamental physics models and particle tracking algorithms that track each particle in space and time. It is a framework for further development (e.g. for projects such as G4-STORK). G4-STORK derives reactor physics parameters (e.g. k eff ) from the continuous evolution of a population of neutrons in space and time in the given simulation geometry. In this paper we detail the major additions to the Geant4 toolkit that were necessary to create G4-STORK. These include a renormalization process that maintains a manageable number of neutrons in the simulation even in very sub- or supercritical systems, scoring processes (e.g. recording fission locations, total neutrons produced and lost, etc.) that allow G4-STORK to calculate the reactor physics parameters, and dynamic simulation geometries that can change over the course of simulation to illicit reactor kinetics responses (e.g. fuel temperature reactivity feedback). The additions are verified through simple simulations and code-to-code comparisons with established reactor physics codes such as DRAGON and MCNP. Additionally, G4-STORK was developed to run a single simulation in parallel over many processors using MPI (Message Passing Interface) pipes
[The evolution of the Italian Code of Medical Deontology: a historical-epistemological perspective].
Conti, A A
The Italian Code of Medical Deontology is a set of self-discipline rules prefixed by the medical profession, that are mandatory for the members of the medical registers, who must conform to these rules. The history of the Italian Code of Medical Deontology dates back to the beginning of the twentieth century. In 1903 it appeared in the form of a "Code of Ethics and Deontology" and was prepared by the Board of the Medical Register of Sassari (Sardinia). This Board inserted the principles inspiring the correct practice of the medical profession in an articulated and self-normative system, also foreseeing disciplinary measures. About ten years later, in 1912, the Medical Register of Turin (Piedmont) elaborated a Code which constituted the basis for a subsequent elaboration leading to a Unified Code of Medical Ethics (1924). After World War II the idea prevailed in Italy that the codes of medical deontology should undergo periodical review, updating and dissemination, and the new 1947 text (Turin) was for the first time amply diffused among Italian physicians. The next national code dates back to 1958, and twenty years later a revision was published. In the 1989 Code new topics appeared, including organ transplantation, artificial in vitro insemination and the role of police doctors; these and other issues were later developed in the 1995, 1998 and 2006 versions of the Code. The last available edition of the Italian Code of Medical Deontology is that of May 2014.
User's manual of Tokamak Simulation Code
International Nuclear Information System (INIS)
Nakamura, Yukiharu; Nishino, Tooru; Tsunematsu, Toshihide; Sugihara, Masayoshi.
1992-12-01
User's manual for use of Tokamak Simulation Code (TSC), which simulates the time-evolutional process of deformable motion of axisymmetric toroidal plasma, is summarized. For the use at JAERI computer system, the TSC is linked with the data management system GAEA. This manual is forcused on the procedure for the input and output by using the GAEA system. Model equations to give axisymmetric motion, outline of code system, optimal method to get the well converged solution are also described. (author)
Bilayer expurgated LDPC codes with uncoded relaying
Directory of Open Access Journals (Sweden)
Md. Noor-A-Rahim
2017-08-01
Full Text Available Bilayer low-density parity-check (LDPC codes are an effective coding technique for decode-and-forward relaying, where the relay forwards extra parity bits to help the destination to decode the source bits correctly. In the existing bilayer coding scheme, these parity bits are protected by an error correcting code and assumed reliably available at the receiver. We propose an uncoded relaying scheme, where the extra parity bits are forwarded to the destination without any protection. Through density evolution analysis and simulation results, we show that our proposed scheme achieves better performance in terms of bit erasure probability than the existing relaying scheme. In addition, our proposed scheme results in lower complexity at the relay.
Evolution of the snake body form reveals homoplasy in amniote Hox gene function.
Head, Jason J; Polly, P David
2015-04-02
Hox genes regulate regionalization of the axial skeleton in vertebrates, and changes in their expression have been proposed to be a fundamental mechanism driving the evolution of new body forms. The origin of the snake-like body form, with its deregionalized pre-cloacal axial skeleton, has been explained as either homogenization of Hox gene expression domains, or retention of standard vertebrate Hox domains with alteration of downstream expression that suppresses development of distinct regions. Both models assume a highly regionalized ancestor, but the extent of deregionalization of the primaxial domain (vertebrae, dorsal ribs) of the skeleton in snake-like body forms has never been analysed. Here we combine geometric morphometrics and maximum-likelihood analysis to show that the pre-cloacal primaxial domain of elongate, limb-reduced lizards and snakes is not deregionalized compared with limbed taxa, and that the phylogenetic structure of primaxial morphology in reptiles does not support a loss of regionalization in the evolution of snakes. We demonstrate that morphometric regional boundaries correspond to mapped gene expression domains in snakes, suggesting that their primaxial domain is patterned by a normally functional Hox code. Comparison of primaxial osteology in fossil and modern amniotes with Hox gene distributions within Amniota indicates that a functional, sequentially expressed Hox code patterned a subtle morphological gradient along the anterior-posterior axis in stem members of amniote clades and extant lizards, including snakes. The highly regionalized skeletons of extant archosaurs and mammals result from independent evolution in the Hox code and do not represent ancestral conditions for clades with snake-like body forms. The developmental origin of snakes is best explained by decoupling of the primaxial and abaxial domains and by increases in somite number, not by changes in the function of primaxial Hox genes.
Jellali, Nabiha; Najjar, Monia; Ferchichi, Moez; Rezig, Houria
2017-07-01
In this paper, a new two-dimensional spectral/spatial codes family, named two dimensional dynamic cyclic shift codes (2D-DCS) is introduced. The 2D-DCS codes are derived from the dynamic cyclic shift code for the spectral and spatial coding. The proposed system can fully eliminate the multiple access interference (MAI) by using the MAI cancellation property. The effect of shot noise, phase-induced intensity noise and thermal noise are used to analyze the code performance. In comparison with existing two dimensional (2D) codes, such as 2D perfect difference (2D-PD), 2D Extended Enhanced Double Weight (2D-Extended-EDW) and 2D hybrid (2D-FCC/MDW) codes, the numerical results show that our proposed codes have the best performance. By keeping the same code length and increasing the spatial code, the performance of our 2D-DCS system is enhanced: it provides higher data rates while using lower transmitted power and a smaller spectral width.
Differentially Encoded LDPC Codes—Part II: General Case and Code Optimization
Directory of Open Access Journals (Sweden)
Jing Li (Tiffany
2008-04-01
Full Text Available This two-part series of papers studies the theory and practice of differentially encoded low-density parity-check (DE-LDPC codes, especially in the context of noncoherent detection. Part I showed that a special class of DE-LDPC codes, product accumulate codes, perform very well with both coherent and noncoherent detections. The analysis here reveals that a conventional LDPC code, however, is not fitful for differential coding and does not, in general, deliver a desirable performance when detected noncoherently. Through extrinsic information transfer (EXIT analysis and a modified “convergence-constraint†density evolution (DE method developed here, we provide a characterization of the type of LDPC degree profiles that work in harmony with differential detection (or a recursive inner code in general, and demonstrate how to optimize these LDPC codes. The convergence-constraint method provides a useful extension to the conventional “threshold-constraint†method, and can match an outer LDPC code to any given inner code with the imperfectness of the inner decoder taken into consideration.
A comparative study of MONTEBURNS and MCNPX 2.6.0 codes in ADS simulations
International Nuclear Information System (INIS)
Barros, Graiciany P.; Pereira, Claubia; Veloso, Maria A.F.; Velasquez, Carlos E.; Costa, Antonella L.
2013-01-01
The possible use of the MONTEBURNS and MCNPX 2.6.0 codes in Accelerator-driven systems (ADSs) simulations for fuel evolution description is discussed. ADSs are investigated for fuel breeding and long-lived fission product transmutation so simulations of fuel evolution have a great relevance. The burnup/depletion capability is present in both studied codes. MONTEBURNS code links Monte Carlo N-Particle Transport Code (MCNP) to the radioactive decay burnup code ORIGEN2, whereas MCNPX depletion/ burnup capability is a linked process involving steady-state flux calculations by MCNPX and nuclide depletion calculations by CINDER90. A lead-cooled accelerator-driven system fueled with thorium was simulated and the results obtained using MONTEBURNS code and the results from MCNPX 2.6.0 code were compared. The system criticality and the variation of the actinide inventory during the burnup were evaluated and the results indicate a similar behavior between the results of each code. (author)
International Nuclear Information System (INIS)
Kalchev, B.; Dimov, D.; Tusheva, P.; Mladenov, I.
2005-01-01
This paper presents the modelling approach for LOCA 100 mm sequence for WWER 1000-B 320 type of reactor with the integral ASTEC computer code and SCDAP/RELAP5 computer code. As a basic input deck the reference input file for Balakovo NPP from the released ASTEC CD has been applied. As a first part of the calculations for the SBLOCA sequence the ASTEC v1.1 modules CESAR, DIVA and CPA have been activated in a coupled mode. For SCDAP/RELAP5 calculation input deck for WWER 1000-B 320 has been applied which meant to be closer to the initial boundary conditions applied for ASTEC WWER 1000 input deck. A SBLOCA 100 mm comparison between ASTEC v1.1 and SCADAP/RELAP5 has been presented. ASTEC predicts vessel failure at 15620 s. ASTEC and SCDAP/RELAP5 give close but not similar results - this could be observed on the trends. The comparison of 100 mm-break shows that SCDAP/RELAP5 predicts clear phenomenological changes in primary pressure evolution and molten pool formation. Similar hydrogen production mass for both codes around 5000 s is detected
Application of the BISON Fuel Performance Code of the FUMEX-III Coordinated Research Project
International Nuclear Information System (INIS)
Williamson, R.L.; Novascone, S.R.
2013-01-01
Since 1981, the International Atomic Energy Agency (IAEA) has sponsored a series of Coordinated Research Projects (CRP) in the area of nuclear fuel modeling. These projects have typically lasted 3-5 years and have had broad international participation. The objectives of the projects have been to assess the maturity and predictive capability of fuel performance codes, support interaction and information exchange between countries with code development and application needs, build a database of well- defined experiments suitable for code validation, transfer a mature fuel modeling code to developing countries, and provide guidelines for code quality assurance and code application to fuel licensing. The fourth and latest of these projects, known as FUMEX-III1 (FUel Modeling at EXtended Burnup- III), began in 2008 and ended in December of 2011. FUMEX-III was the first of this series of fuel modeling CRP's in which the INL participated. Participants met at the beginning of the project to discuss and select a set of experiments ('priority cases') for consideration during the project. These priority cases were of broad interest to the participants and included reasonably well-documented and reliable data. A meeting was held midway through the project for participants to present and discuss progress on modeling the priority cases. A final meeting was held at close of the project to present and discuss final results and provide input for a final report. Also in 2008, the INL initiated development of a new multidimensional (2D and 3D) multiphysics nuclear fuel performance code called BISON, with code development progressing steadily during the three-year FUMEX-III project. Interactions with international fuel modeling researchers via FUMEX-III played a significant role in the BISON evolution, particularly influencing the selection of material and behavioral models which are now included in the code. The FUMEX-III cases are generally integral fuel rod experiments occurring
Validating the BISON fuel performance code to integral LWR experiments
Energy Technology Data Exchange (ETDEWEB)
Williamson, R.L., E-mail: Richard.Williamson@inl.gov [Fuel Modeling and Simulation, Idaho National Laboratory, P.O. Box 1625, Idaho Falls, ID 83415-3840 (United States); Gamble, K.A., E-mail: Kyle.Gamble@inl.gov [Fuel Modeling and Simulation, Idaho National Laboratory, P.O. Box 1625, Idaho Falls, ID 83415-3840 (United States); Perez, D.M., E-mail: Danielle.Perez@inl.gov [Fuel Modeling and Simulation, Idaho National Laboratory, P.O. Box 1625, Idaho Falls, ID 83415-3840 (United States); Novascone, S.R., E-mail: Stephen.Novascone@inl.gov [Fuel Modeling and Simulation, Idaho National Laboratory, P.O. Box 1625, Idaho Falls, ID 83415-3840 (United States); Pastore, G., E-mail: Giovanni.Pastore@inl.gov [Fuel Modeling and Simulation, Idaho National Laboratory, P.O. Box 1625, Idaho Falls, ID 83415-3840 (United States); Gardner, R.J., E-mail: Russell.Gardner@inl.gov [Fuel Modeling and Simulation, Idaho National Laboratory, P.O. Box 1625, Idaho Falls, ID 83415-3840 (United States); Hales, J.D., E-mail: Jason.Hales@inl.gov [Fuel Modeling and Simulation, Idaho National Laboratory, P.O. Box 1625, Idaho Falls, ID 83415-3840 (United States); Liu, W., E-mail: Wenfeng.Liu@anatech.com [ANATECH Corporation, 5435 Oberlin Dr., San Diego, CA 92121 (United States); Mai, A., E-mail: Anh.Mai@anatech.com [ANATECH Corporation, 5435 Oberlin Dr., San Diego, CA 92121 (United States)
2016-05-15
Highlights: • The BISON multidimensional fuel performance code is being validated to integral LWR experiments. • Code and solution verification are necessary prerequisites to validation. • Fuel centerline temperature comparisons through all phases of fuel life are very reasonable. • Accuracy in predicting fission gas release is consistent with state-of-the-art modeling and the involved uncertainties. • Rod diameter comparisons are not satisfactory and further investigation is underway. - Abstract: BISON is a modern finite element-based nuclear fuel performance code that has been under development at Idaho National Laboratory (INL) since 2009. The code is applicable to both steady and transient fuel behavior and has been used to analyze a variety of fuel forms in 1D spherical, 2D axisymmetric, or 3D geometries. Code validation is underway and is the subject of this study. A brief overview of BISON's computational framework, governing equations, and general material and behavioral models is provided. BISON code and solution verification procedures are described, followed by a summary of the experimental data used to date for validation of Light Water Reactor (LWR) fuel. Validation comparisons focus on fuel centerline temperature, fission gas release, and rod diameter both before and following fuel-clad mechanical contact. Comparisons for 35 LWR rods are consolidated to provide an overall view of how the code is predicting physical behavior, with a few select validation cases discussed in greater detail. Results demonstrate that (1) fuel centerline temperature comparisons through all phases of fuel life are very reasonable with deviations between predictions and experimental data within ±10% for early life through high burnup fuel and only slightly out of these bounds for power ramp experiments, (2) accuracy in predicting fission gas release appears to be consistent with state-of-the-art modeling and with the involved uncertainties and (3) comparison
Natural selection on protein-coding genes in the human genome
DEFF Research Database (Denmark)
Bustamente, Carlos D.; Fledel-Alon, Adi; Williamson, Scott
2005-01-01
, showing an excess of deleterious variation within local populations 9, 10 . Here we contrast patterns of coding sequence polymorphism identified by direct sequencing of 39 humans for over 11,000 genes to divergence between humans and chimpanzees, and find strong evidence that natural selection has shaped......Comparisons of DNA polymorphism within species to divergence between species enables the discovery of molecular adaptation in evolutionarily constrained genes as well as the differentiation of weak from strong purifying selection 1, 2, 3, 4 . The extent to which weak negative and positive darwinian...... selection have driven the molecular evolution of different species varies greatly 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16 , with some species, such as Drosophila melanogaster, showing strong evidence of pervasive positive selection 6, 7, 8, 9 , and others, such as the selfing weed Arabidopsis thaliana...
Hoffmann, Robert D; Palmgren, Michael
2016-06-13
Whole-genome duplications in the ancestors of many diverse species provided the genetic material for evolutionary novelty. Several models explain the retention of paralogous genes. However, how these models are reflected in the evolution of coding and non-coding sequences of paralogous genes is unknown. Here, we analyzed the coding and non-coding sequences of paralogous genes in Arabidopsis thaliana and compared these sequences with those of orthologous genes in Arabidopsis lyrata. Paralogs with lower expression than their duplicate had more nonsynonymous substitutions, were more likely to fractionate, and exhibited less similar expression patterns with their orthologs in the other species. Also, lower-expressed genes had greater tissue specificity. Orthologous conserved non-coding sequences in the promoters, introns, and 3' untranslated regions were less abundant at lower-expressed genes compared to their higher-expressed paralogs. A gene ontology (GO) term enrichment analysis showed that paralogs with similar expression levels were enriched in GO terms related to ribosomes, whereas paralogs with different expression levels were enriched in terms associated with stress responses. Loss of conserved non-coding sequences in one gene of a paralogous gene pair correlates with reduced expression levels that are more tissue specific. Together with increased mutation rates in the coding sequences, this suggests that similar forces of purifying selection act on coding and non-coding sequences. We propose that coding and non-coding sequences evolve concurrently following gene duplication.
An experimental comparison of coded modulation strategies for 100 Gb/s transceivers
Sillekens, E.; Alvarado, A.; Okonkwo, C.; Thomsen, B.C.
2016-01-01
Coded modulation is a key technique to increase the spectral efficiency of coherent optical communication systems. Two popular strategies for coded modulation are turbo trellis-coded modulation (TTCM) and bit-interleaved coded modulation (BICM) based on low-density parity-check (LDPC) codes.
International Nuclear Information System (INIS)
Klasky, Marc Louis; Myers, Steven Charles; James, Michael R.; Mayo, Douglas R.
2016-01-01
To facilitate the timely execution of System Threat Reviews (STRs) for DNDO, and also to develop a methodology for performing STRs, LANL performed comparisons of several radiation transport codes (MCNP, GADRAS, and Gamma-Designer) that have been previously utilized to compute radiation signatures. While each of these codes has strengths, it is of paramount interest to determine the limitations of each of the respective codes and also to identify the most time efficient means by which to produce computational results, given the large number of parametric cases that are anticipated in performing STR's. These comparisons serve to identify regions of applicability for each code and provide estimates of uncertainty that may be anticipated. Furthermore, while performing these comparisons, examination of the sensitivity of the results to modeling assumptions was also examined. These investigations serve to enable the creation of the LANL methodology for performing STRs. Given the wide variety of radiation test sources, scenarios, and detectors, LANL calculated comparisons of the following parameters: decay data, multiplicity, device (n,γ) leakages, and radiation transport through representative scenes and shielding. This investigation was performed to understand potential limitations utilizing specific codes for different aspects of the STR challenges.
Improved Design of Unequal Error Protection LDPC Codes
Directory of Open Access Journals (Sweden)
Sandberg Sara
2010-01-01
Full Text Available We propose an improved method for designing unequal error protection (UEP low-density parity-check (LDPC codes. The method is based on density evolution. The degree distribution with the best UEP properties is found, under the constraint that the threshold should not exceed the threshold of a non-UEP code plus some threshold offset. For different codeword lengths and different construction algorithms, we search for good threshold offsets for the UEP code design. The choice of the threshold offset is based on the average a posteriori variable node mutual information. Simulations reveal the counter intuitive result that the short-to-medium length codes designed with a suitable threshold offset all outperform the corresponding non-UEP codes in terms of average bit-error rate. The proposed codes are also compared to other UEP-LDPC codes found in the literature.
A Life-Cycle Risk-Informed Systems Structured Nuclear Code
International Nuclear Information System (INIS)
Hill, Ralph S. III
2002-01-01
Current American Society of Mechanical Engineers (ASME) nuclear codes and standards rely primarily on deterministic and mechanistic approaches to design. The design code is a separate volume from the code for inservice inspections and both are separate from the standards for operations and maintenance. The ASME code for inservice inspections and code for nuclear plant operations and maintenance have adopted risk-informed methodologies for inservice inspection, preventive maintenance, and repair and replacement decisions. The American Institute of Steel Construction and the American Concrete Institute have incorporated risk-informed probabilistic methodologies into their design codes. It is proposed that the ASME nuclear code should undergo a planned evolution that integrates the various nuclear codes and standards and adopts a risk-informed approach across a facility life-cycle - encompassing design, construction, operation, maintenance and closure. (author)
International Nuclear Information System (INIS)
Nikonov, S.; Pasichnyk, I.; Velkov, K.; Pautz, A.
2011-01-01
The paper describes the performed comparisons of measured and simulated local core data based on the OECD/NEA Benchmark on Kalinin-3 NPP: 'Switching off of one of the four operating main circulation pumps at nominal reactor power'. The local measurements of in core self-powered neutron detectors (SPND) in 64 fuel assemblies on 7 axial levels are used for the comparisons of the assemblies axial power distributions and the thermocouples readings at 93 fuel assembly heads are applied for the fuel assembly coolant temperature comparisons. The analyses are done on the base of benchmark transient calculations performed with the coupled system code ATHLET/BIPR-VVER. In order to describe more realistically the fluid mixing phenomena in a reactor pressure vessel a new enhanced nodalization scheme is being developed. It could take into account asymmetric flow behaviour in the reactor pressure vessel structures like downcomer, reactor core inlet and outlet, control rods' guided tubes, support grids etc. For this purpose details of the core geometry are modelled. About 58000 control volumes and junctions are applied. Cross connection are used to describe the interaction between the fluid objects. The performed comparisons are of great interest because they show some advantages by performing coupled code production pseudo-3D analysis of NPPs applying the parallel thermo-hydraulic channel methodology (or 1D thermo-hydraulic system code modeling). (Authors)
Code Package to Analyze Parameters of the WWER Fuel Rod. TOPRA-2 Code - Verification Data
International Nuclear Information System (INIS)
Scheglov, A.; Proselkov, V.; Passage, G.; Stefanova, S.
2009-01-01
Presented are the data for computer codes to analyze WWER fuel rods, used in the WWER department of RRC 'Kurchatov Institute'. Presented is the description of TOPRA-2 code intended for the engineering analysis of thermophysical and strength parameters of the WWER fuel rod - temperature distributions along the fuel radius, gas pressures under the cladding, stresses in the cladding, etc. for the reactor operation in normal conditions. Presented are some results of the code verification against test problems and the data obtained in the experimental programs. Presented are comparison results of the calculations with TOPRA-2 and TRANSURANUS (V1M1J06) codes. Results obtained in the course of verification demonstrate possibility of application of the methodology and TOPRA-2 code for the engineering analysis of the WWER fuel rods
Radio evolution of young supernova remnants
International Nuclear Information System (INIS)
Shirkey, R.C. Jr.
1976-01-01
A one dimensional spherically symmetric magnetohydrodynamic code was developed to describe the evolution of the dynamical and radio properties of young supernova remnants. The code contains subroutines which treat the development of Rayleigh-Taylor instabilities wherever they arise in the remnant. Under the assumption of quasi-stationary equilibrium (dynamical changes considered slow in comparison to the time it takes the instability to achieve equilibrium) determined that the velocity of the instability is W approximately (a lambda)/sup 1 / 2 /, where a is the Rayleigh-Taylor acceleration and lambda is the wavelength of the instability. Subsequent processing of the kinetic energy of expansion, through turbulence, resulted in an increase in temperature and magnetic field strength. The model was used to analyze instability effects of density inhomogeneities in the interstellar medium on magnetic field amplification. A model was constructed for Cassiopeia A which gave good agreement with the measured dynamics, radio structure, and secular flux density decrease for the remnant. In order to compare observation with theory a computer routine was written that convolves the surface brightness at the source. The resultant convolved surface brightness graph is in good agreement with Rosenberg's observed ''model profile;'' differences between the graphs can be attributed to the asymmetric expansion of Cassiopeia A
Rate of evolution in brain-expressed genes in humans and other primates.
Directory of Open Access Journals (Sweden)
Hurng-Yi Wang
2007-02-01
Full Text Available Brain-expressed genes are known to evolve slowly in mammals. Nevertheless, since brains of higher primates have evolved rapidly, one might expect acceleration in DNA sequence evolution in their brain-expressed genes. In this study, we carried out full-length cDNA sequencing on the brain transcriptome of an Old World monkey (OWM and then conducted three-way comparisons among (i mouse, OWM, and human, and (ii OWM, chimpanzee, and human. Although brain-expressed genes indeed appear to evolve more rapidly in species with more advanced brains (apes > OWM > mouse, a similar lineage effect is observable for most other genes. The broad inclusion of genes in the reference set to represent the genomic average is therefore critical to this type of analysis. Calibrated against the genomic average, the rate of evolution among brain-expressed genes is probably lower (or at most equal in humans than in chimpanzee and OWM. Interestingly, the trend of slow evolution in coding sequence is no less pronounced among brain-specific genes, vis-à-vis brain-expressed genes in general. The human brain may thus differ from those of our close relatives in two opposite directions: (i faster evolution in gene expression, and (ii a likely slowdown in the evolution of protein sequences. Possible explanations and hypotheses are discussed.
Linear and nonlinear verification of gyrokinetic microstability codes
Bravenec, R. V.; Candy, J.; Barnes, M.; Holland, C.
2011-12-01
Verification of nonlinear microstability codes is a necessary step before comparisons or predictions of turbulent transport in toroidal devices can be justified. By verification we mean demonstrating that a code correctly solves the mathematical model upon which it is based. Some degree of verification can be accomplished indirectly from analytical instability threshold conditions, nonlinear saturation estimates, etc., for relatively simple plasmas. However, verification for experimentally relevant plasma conditions and physics is beyond the realm of analytical treatment and must rely on code-to-code comparisons, i.e., benchmarking. The premise is that the codes are verified for a given problem or set of parameters if they all agree within a specified tolerance. True verification requires comparisons for a number of plasma conditions, e.g., different devices, discharges, times, and radii. Running the codes and keeping track of linear and nonlinear inputs and results for all conditions could be prohibitive unless there was some degree of automation. We have written software to do just this and have formulated a metric for assessing agreement of nonlinear simulations. We present comparisons, both linear and nonlinear, between the gyrokinetic codes GYRO [J. Candy and R. E. Waltz, J. Comput. Phys. 186, 545 (2003)] and GS2 [W. Dorland, F. Jenko, M. Kotschenreuther, and B. N. Rogers, Phys. Rev. Lett. 85, 5579 (2000)]. We do so at the mid-radius for the same discharge as in earlier work [C. Holland, A. E. White, G. R. McKee, M. W. Shafer, J. Candy, R. E. Waltz, L. Schmitz, and G. R. Tynan, Phys. Plasmas 16, 052301 (2009)]. The comparisons include electromagnetic fluctuations, passing and trapped electrons, plasma shaping, one kinetic impurity, and finite Debye-length effects. Results neglecting and including electron collisions (Lorentz model) are presented. We find that the linear frequencies with or without collisions agree well between codes, as do the time averages of
International Nuclear Information System (INIS)
Mirza, S.A.
1999-01-01
In the present study, a two-dimensional computer code has been developed in FORTRAN using CFD technique, which is basically a numerical scheme. This computer code solves the Navier Stokes equations and continuity equation to find out the velocity and pressure fields within a given domain. This analysis has been done for the developed within a square cavity driven by the upper wall which has become a bench mark for testing and comparing the newly developed numerical schemes. Before to handle this task, different one-dimensional cases have been studied by CFD technique and their FORTRAN programs written. The cases studied are Couette flow, Poiseuille flow with and without using symmetric boundary condition. Finally a comparison between CFD results and analytical results has also been made. For the cavity flow the results from the developed code have been obtained for different Reynolds numbers which are finally presented in the form of velocity vectors. The comparison of the developed code results have been made with the results obtained from the share ware version of a commercially available code for Reynolds number of 10.0. The disagreement in the results quantitatively and qualitatively at some grid points of the calculation domain have been discussed and future recommendations in this regard have also been made. (author)
DEFF Research Database (Denmark)
Bullwinkle, Tammy J; Ibba, Michael
2013-01-01
ancestor and as such they provide insights into the evolution and development of the extant genetic code. Although the aaRSs have long been viewed as a highly conserved group of enzymes, findings within the last couple of decades have started to demonstrate how diverse and versatile these enzymes really...... are. Beyond their central role in translation, aaRSs and their numerous homologs have evolved a wide array of alternative functions both inside and outside translation. Current understanding of the emergence of the aaRSs, and their subsequent evolution into a functionally diverse enzyme family...
Charge state evolution in the solar wind. III. Model comparison with observations
Energy Technology Data Exchange (ETDEWEB)
Landi, E.; Oran, R.; Lepri, S. T.; Zurbuchen, T. H.; Fisk, L. A.; Van der Holst, B. [Department of Atmospheric, Oceanic and Space Sciences, University of Michigan, Ann Arbor, MI 48109 (United States)
2014-08-01
We test three theoretical models of the fast solar wind with a set of remote sensing observations and in-situ measurements taken during the minimum of solar cycle 23. First, the model electron density and temperature are compared to SOHO/SUMER spectroscopic measurements. Second, the model electron density, temperature, and wind speed are used to predict the charge state evolution of the wind plasma from the source regions to the freeze-in point. Frozen-in charge states are compared with Ulysses/SWICS measurements at 1 AU, while charge states close to the Sun are combined with the CHIANTI spectral code to calculate the intensities of selected spectral lines, to be compared with SOHO/SUMER observations in the north polar coronal hole. We find that none of the theoretical models are able to completely reproduce all observations; namely, all of them underestimate the charge state distribution of the solar wind everywhere, although the levels of disagreement vary from model to model. We discuss possible causes of the disagreement, namely, uncertainties in the calculation of the charge state evolution and of line intensities, in the atomic data, and in the assumptions on the wind plasma conditions. Last, we discuss the scenario where the wind is accelerated from a region located in the solar corona rather than in the chromosphere as assumed in the three theoretical models, and find that a wind originating from the corona is in much closer agreement with observations.
Charge state evolution in the solar wind. III. Model comparison with observations
International Nuclear Information System (INIS)
Landi, E.; Oran, R.; Lepri, S. T.; Zurbuchen, T. H.; Fisk, L. A.; Van der Holst, B.
2014-01-01
We test three theoretical models of the fast solar wind with a set of remote sensing observations and in-situ measurements taken during the minimum of solar cycle 23. First, the model electron density and temperature are compared to SOHO/SUMER spectroscopic measurements. Second, the model electron density, temperature, and wind speed are used to predict the charge state evolution of the wind plasma from the source regions to the freeze-in point. Frozen-in charge states are compared with Ulysses/SWICS measurements at 1 AU, while charge states close to the Sun are combined with the CHIANTI spectral code to calculate the intensities of selected spectral lines, to be compared with SOHO/SUMER observations in the north polar coronal hole. We find that none of the theoretical models are able to completely reproduce all observations; namely, all of them underestimate the charge state distribution of the solar wind everywhere, although the levels of disagreement vary from model to model. We discuss possible causes of the disagreement, namely, uncertainties in the calculation of the charge state evolution and of line intensities, in the atomic data, and in the assumptions on the wind plasma conditions. Last, we discuss the scenario where the wind is accelerated from a region located in the solar corona rather than in the chromosphere as assumed in the three theoretical models, and find that a wind originating from the corona is in much closer agreement with observations.
Genomics, evolution and development of amphioxus and tunicates: The Goldilocks principle.
Holland, Linda Z
2015-06-01
Morphological comparisons among extant animals have long been used to infer their long-extinct ancestors for which the fossil record is poor or non-existent. For evolution of the vertebrates, the comparison has typically involved amphioxus and vertebrates. Both groups are evolving relatively slowly, and their genomes share a high level of synteny. Both vertebrates and amphioxus have regulative development in which cell fates become fixed only gradually during embryogenesis. Thus, their development fits a modified hourglass model in which constraints are greatest at the phylotypic stage (i.e., the late neurula/early larva), but are somewhat greater on earlier development than on later development. In contrast, the third group of chordates, the tunicates, which are sister group to vertebrates, are evolving rapidly. Constraints on evolution of tunicate genomes are relaxed, and they have discarded key developmental genes and organized much of their coding sequences into operons, which are transcribed as a single mRNA that undergoes trans-splicing. This contrasts with vertebrates and amphioxus, whose genomes are not organized into operons. Concomitantly, tunicates have switched to determinant development with very early fixation of cell fates. Thus, tunicate development more closely fits a progressive divergence model (shaped more like a wine glass than an hourglass) in which the constraints on the zygote and very early development are greatest. This model can help explain why tunicate body plans are so very diverse. The relaxed constraints on development after early cleavage stages are correlated with relaxed constraints on genome evolution. The question remains: which came first? © 2014 Wiley Periodicals, Inc.
Comparison of the two thermal-hydraulic codes Thyc and Vipre-02 on Vatican experiment
International Nuclear Information System (INIS)
Montat, D.; Maurel, F.; Olive, J.; Srikantiah, G.
1993-08-01
EDF's THYC and EPRI's VIPRE-02 3D thermalhydraulics computer codes are based on strongly different approaches (mixing against two-fluid representation for the two-phase flow, and porous media against subchannel approach for the rod bundle geometry description). In order to assess their efficiencies, they were both used to compute the two-phase flow behavior in an EDF experimental set-up, VATICAN. This set-up consisted of a 2.10 m high vertically oriented rod bundle of 40 heated rods in a 10 by 4 matrix (9.5 mm diameter and 12.6 mm square pitch). Refrigerant - 114 was introduced through the bottom left and right sides of the bundle and exited at the top. The lower 1.6 m height of the bundle was separated into two symmetric halves by a vertical wall. Desequilibrium in flow and quality between the two halves could be set, so that strong lateral mixing occurred above the divider wall. Comparison of codes computing and experimental data showed to some extent the superiority of a 6-equations model, but also highlighted the dramatic need for good constitutive relations concerning for instance the turbulent mixing. Some systematic deviations from experimental data were detected, linked to poor accuracy of some chosen closure laws. (authors). 6 figs., 3 tabs., 5 refs
Comparison of strongly heat-driven flow codes for unsaturated media
International Nuclear Information System (INIS)
Updegraff, C.D.
1989-08-01
Under the sponsorship of the US Nuclear Regulatory Commission, Sandia National Laboratories (SNL) is developing a performance assessment methodology for the analysis of long-term disposal of high-level radioactive waste (HLW) in unsaturated welded tuff. As part of this effort, SNL evaluated existing strongly heat-driven flow computer codes for simulating ground-water flow in unsaturated media. The three codes tested, NORIA, PETROS, and TOUGH, were compared against a suite of problems for which analytical and numerical solutions or experimental results exist. The problems were selected to test the abilities of the codes to simulate situations ranging from simple, uncoupled processes, such as two-phase flow or heat transfer, to fully coupled processes, such as vaporization caused by high temperatures. In general, all three codes were found to be difficult to use because of (1) built-in time stepping criteria, (2) the treatment of boundary conditions, and (3) handling of evaporation/condensation problems. A drawback of the study was that adequate problems related to expected repository conditions were not available in the literature. Nevertheless, the results of this study suggest the need for thorough investigations of the impact of heat on the flow field in the vicinity of an unsaturated HLW repository. Recommendations are to develop a new flow code combining the best features of these three codes and eliminating the worst ones. 19 refs., 49 figs
Advanced hardware design for error correcting codes
Coussy, Philippe
2015-01-01
This book provides thorough coverage of error correcting techniques. It includes essential basic concepts and the latest advances on key topics in design, implementation, and optimization of hardware/software systems for error correction. The book’s chapters are written by internationally recognized experts in this field. Topics include evolution of error correction techniques, industrial user needs, architectures, and design approaches for the most advanced error correcting codes (Polar Codes, Non-Binary LDPC, Product Codes, etc). This book provides access to recent results, and is suitable for graduate students and researchers of mathematics, computer science, and engineering. • Examines how to optimize the architecture of hardware design for error correcting codes; • Presents error correction codes from theory to optimized architecture for the current and the next generation standards; • Provides coverage of industrial user needs advanced error correcting techniques.
SUMMARY OF GENERAL WORKING GROUP A+B+D: CODES BENCHMARKING.
Energy Technology Data Exchange (ETDEWEB)
WEI, J.; SHAPOSHNIKOVA, E.; ZIMMERMANN, F.; HOFMANN, I.
2006-05-29
Computer simulation is an indispensable tool in assisting the design, construction, and operation of accelerators. In particular, computer simulation complements analytical theories and experimental observations in understanding beam dynamics in accelerators. The ultimate function of computer simulation is to study mechanisms that limit the performance of frontier accelerators. There are four goals for the benchmarking of computer simulation codes, namely debugging, validation, comparison and verification: (1) Debugging--codes should calculate what they are supposed to calculate; (2) Validation--results generated by the codes should agree with established analytical results for specific cases; (3) Comparison--results from two sets of codes should agree with each other if the models used are the same; and (4) Verification--results from the codes should agree with experimental measurements. This is the summary of the joint session among working groups A, B, and D of the HI32006 Workshop on computer codes benchmarking.
A comparison of thermal algorithms of fuel rod performance code systems
International Nuclear Information System (INIS)
Park, C. J.; Park, J. H.; Kang, K. H.; Ryu, H. J.; Moon, J. S.; Jeong, I. H.; Lee, C. Y.; Song, K. C.
2003-11-01
The goal of the fuel rod performance is to identify the robustness of a fuel rod with cladding material. Computer simulation of the fuel rod performance becomes one of important parts to designed and evaluate new nuclear fuels and claddings. To construct a computing code system for the fuel rod performance, several algorithms of the existing fuel rod performance code systems are compared and are summarized as a preliminary work. Among several code systems, FRAPCON, and FEMAXI for LWR, ELESTRES for CANDU reactor, and LIFE for fast reactor are reviewed. Thermal algorithms of the above codes are investigated including methodologies and subroutines. This work will be utilized to construct a computing code system for dry process fuel rod performance
A comparison of thermal algorithms of fuel rod performance code systems
Energy Technology Data Exchange (ETDEWEB)
Park, C. J.; Park, J. H.; Kang, K. H.; Ryu, H. J.; Moon, J. S.; Jeong, I. H.; Lee, C. Y.; Song, K. C
2003-11-01
The goal of the fuel rod performance is to identify the robustness of a fuel rod with cladding material. Computer simulation of the fuel rod performance becomes one of important parts to designed and evaluate new nuclear fuels and claddings. To construct a computing code system for the fuel rod performance, several algorithms of the existing fuel rod performance code systems are compared and are summarized as a preliminary work. Among several code systems, FRAPCON, and FEMAXI for LWR, ELESTRES for CANDU reactor, and LIFE for fast reactor are reviewed. Thermal algorithms of the above codes are investigated including methodologies and subroutines. This work will be utilized to construct a computing code system for dry process fuel rod performance.
Massively parallel Fokker-Planck code ALLAp
International Nuclear Information System (INIS)
Batishcheva, A.A.; Krasheninnikov, S.I.; Craddock, G.G.; Djordjevic, V.
1996-01-01
The recently developed for workstations Fokker-Planck code ALLA simulates the temporal evolution of 1V, 2V and 1D2V collisional edge plasmas. In this work we present the results of code parallelization on the CRI T3D massively parallel platform (ALLAp version). Simultaneously we benchmark the 1D2V parallel vesion against an analytic self-similar solution of the collisional kinetic equation. This test is not trivial as it demands a very strong spatial temperature and density variation within the simulation domain. (orig.)
On the automated assessment of nuclear reactor systems code accuracy
International Nuclear Information System (INIS)
Kunz, Robert F.; Kasmala, Gerald F.; Mahaffy, John H.; Murray, Christopher J.
2002-01-01
An automated code assessment program (ACAP) has been developed to provide quantitative comparisons between nuclear reactor systems (NRS) code results and experimental measurements. The tool provides a suite of metrics for quality of fit to specific data sets, and the means to produce one or more figures of merit (FOM) for a code, based on weighted averages of results from the batch execution of a large number of code-experiment and code-code data comparisons. Accordingly, this tool has the potential to significantly streamline the verification and validation (V and V) processes in NRS code development environments which are characterized by rapidly evolving software, many contributing developers and a large and growing body of validation data. In this paper, a survey of data conditioning and analysis techniques is summarized which focuses on their relevance to NRS code accuracy assessment. A number of methods are considered for their applicability to the automated assessment of the accuracy of NRS code simulations. A variety of data types and computational modeling methods are considered from a spectrum of mathematical and engineering disciplines. The goal of the survey was to identify needs, issues and techniques to be considered in the development of an automated code assessment procedure, to be used in United States Nuclear Regulatory Commission (NRC) advanced thermal-hydraulic T/H code consolidation efforts. The ACAP software was designed based in large measure on the findings of this survey. An overview of this tool is summarized and several NRS data applications are provided. The paper is organized as follows: The motivation for this work is first provided by background discussion that summarizes the relevance of this subject matter to the nuclear reactor industry. Next, the spectrum of NRS data types are classified into categories, in order to provide a basis for assessing individual comparison methods. Then, a summary of the survey is provided, where each
Input data required for specific performance assessment codes
International Nuclear Information System (INIS)
Seitz, R.R.; Garcia, R.S.; Starmer, R.J.; Dicke, C.A.; Leonard, P.R.; Maheras, S.J.; Rood, A.S.; Smith, R.W.
1992-02-01
The Department of Energy's National Low-Level Waste Management Program at the Idaho National Engineering Laboratory generated this report on input data requirements for computer codes to assist States and compacts in their performance assessments. This report gives generators, developers, operators, and users some guidelines on what input data is required to satisfy 22 common performance assessment codes. Each of the codes is summarized and a matrix table is provided to allow comparison of the various input required by the codes. This report does not determine or recommend which codes are preferable
The 1992 ENDF Pre-processing codes
International Nuclear Information System (INIS)
Cullen, D.E.
1992-01-01
This document summarizes the 1992 version of the ENDF pre-processing codes which are required for processing evaluated nuclear data coded in the format ENDF-4, ENDF-5, or ENDF-6. Included are the codes CONVERT, MERGER, LINEAR, RECENT, SIGMA1, LEGEND, FIXUP, GROUPIE, DICTION, MIXER, VIRGIN, COMPLOT, EVALPLOT, RELABEL. Some of the functions of these codes are: to calculate cross-sections from resonance parameters; to calculate angular distributions, group average, mixtures of cross-sections, etc; to produce graphical plottings and data comparisons. The codes are designed to operate on virtually any type of computer including PC's. They are available from the IAEA Nuclear Data Section, free of charge upon request, on magnetic tape or a set of HD diskettes. (author)
Evolution and seismic tools for stellar astrophysics
Monteiro, Mario JPFG
2008-01-01
A collection of articles published by the journal "Astrophysics and Space Science, Volume 316, Number 1-4", August 2008. This work covers 10 evolution codes and 9 oscillation codes. It is suitable for researchers and research students working on the modeling of stars and on the implementation of seismic test of stellar models.
Development of Multi-Scale Finite Element Analysis Codes for High Formability Sheet Metal Generation
International Nuclear Information System (INIS)
Nnakamachi, Eiji; Kuramae, Hiroyuki; Ngoc Tam, Nguyen; Nakamura, Yasunori; Sakamoto, Hidetoshi; Morimoto, Hideo
2007-01-01
In this study, the dynamic- and static-explicit multi-scale finite element (F.E.) codes are developed by employing the homogenization method, the crystalplasticity constitutive equation and SEM-EBSD measurement based polycrystal model. These can predict the crystal morphological change and the hardening evolution at the micro level, and the macroscopic plastic anisotropy evolution. These codes are applied to analyze the asymmetrical rolling process, which is introduced to control the crystal texture of the sheet metal for generating a high formability sheet metal. These codes can predict the yield surface and the sheet formability by analyzing the strain path dependent yield, the simple sheet forming process, such as the limit dome height test and the cylindrical deep drawing problems. It shows that the shear dominant rolling process, such as the asymmetric rolling, generates ''high formability'' textures and eventually the high formability sheet. The texture evolution and the high formability of the newly generated sheet metal experimentally were confirmed by the SEM-EBSD measurement and LDH test. It is concluded that these explicit type crystallographic homogenized multi-scale F.E. code could be a comprehensive tool to predict the plastic induced texture evolution, anisotropy and formability by the rolling process and the limit dome height test analyses
Verification of 3-D generation code package for neutronic calculations of WWERs
International Nuclear Information System (INIS)
Sidorenko, V.D.; Aleshin, S.S.; Bolobov, P.A.; Bolshagin, S.N.; Lazarenko, A.P.; Markov, A.V.; Morozov, V.V.; Syslov, A.A.; Tsvetkov, V.M.
2000-01-01
Materials on verification of the 3 -d generation code package for WWERs neutronic calculations are presented. The package includes: - spectral code TVS-M; - 2-D fine mesh diffusion code PERMAK-A for 4- or 6-group calculation of WWER core burnup; - 3-D coarse mesh diffusion code BIPR-7A for 2-group calculations of quasi-stationary WWERs regimes. The materials include both TVS-M verification data and verification data on PERMAK-A and BIPR-7A codes using constant libraries generated with TVS-M. All materials are related to the fuel without Gd. TVS-M verification materials include results of comparison both with benchmark calculations obtained by other codes and with experiments carried out at ZR-6 critical facility. PERMAK-A verification materials contain results of comparison with TVS-M calculations and with ZR-6 experiments. BIPR-7A materials include comparison with operation data for Dukovany-2 and Loviisa-1 NPPs (WWER-440) and for Balakovo NPP Unit 4 (WWER-1000). The verification materials demonstrate rather good accuracy of calculations obtained with the use of code package of the 3 -d generation. (Authors)
Correlated Errors in the Surface Code
Lopez, Daniel; Mucciolo, E. R.; Novais, E.
2012-02-01
A milestone step into the development of quantum information technology would be the ability to design and operate a reliable quantum memory. The greatest obstacle to create such a device has been decoherence due to the unavoidable interaction between the quantum system and its environment. Quantum Error Correction is therefore an essential ingredient to any quantum computing information device. A great deal of attention has been given to surface codes, since it has very good scaling properties. In this seminar, we discuss the time evolution of a qubit encoded in the logical basis of a surface code. The system is interacting with a bosonic environment at zero temperature. Our results show how much spatial and time correlations can be detrimental to the efficiency of the code.
A guide to the coupled chemical equilibria and migration code CHEQMATE
International Nuclear Information System (INIS)
Haworth, A.; Sharland, S.M.; Tasker, P.W.; Tweed, C.J.
1988-02-01
The CHEQMATE (CHemical EQuilibrium with Migration and Transport Equations) program has been developed to model the evolution of spatially inhomogeneous aqueous chemical systems. CHEQMATE models one-dimensional diffusion and electromigration of ionic species with chemical equilibration provided by the geochemical code PHREEQE. The transport and chemical parts of the CHEQMATE code are iteratively coupled, so that local chemical equilibrium is maintained as the transport processes evolve. CHEQMATE is very flexible and can easily be applied to many different evolving chemical systems. It has principally been used to study the evolution of the chemical environment in and around a nuclear waste repository. (author)
Draft-Report on the RTOP-Code Simulations in the Fumex-3 Exercises
International Nuclear Information System (INIS)
Likhanskii, V.
2013-01-01
The RTOP-code is used for prediction of the following main parameters of a fuel rod during irradiation: - internal gas pressure in fuel rods - mechanical stresses in cladding and fuel pellets due to PCMI. Simulation of fuel behavior by the RTOP-code is based on various physical models. 1. Thermal models. 2. Evolution of Burnup and Pu distribution in the fuel rod during irradiation. 3. Fission gas release models. 4. Models of microstructure evolution of the fuel. 5. Mechanical stresses models and models for description of plastic deformations of fuel and cladding. (author)
Timing comparison of two-dimensional discrete-ordinates codes for criticality calculations
International Nuclear Information System (INIS)
Miller, W.F. Jr.; Alcouffe, R.E.; Bosler, G.E.; Brinkley, F.W. Jr.; O'dell, R.D.
1979-01-01
The authors compare two-dimensional discrete-ordinates neutron transport computer codes to solve reactor criticality problems. The fundamental interest is in determining which code requires the minimum Central Processing Unit (CPU) time for a given numerical model of a reasonably realistic fast reactor core and peripherals. The computer codes considered are the most advanced available and, in three cases, are not officially released. The conclusion, based on the study of four fast reactor core models, is that for this class of problems the diffusion synthetic accelerated version of TWOTRAN, labeled TWOTRAN-DA, is superior to the other codes in terms of CPU requirements
Spread-spectrum communication using binary spatiotemporal chaotic codes
International Nuclear Information System (INIS)
Wang Xingang; Zhan Meng; Gong Xiaofeng; Lai, C.H.; Lai, Y.-C.
2005-01-01
We propose a scheme to generate binary code for baseband spread-spectrum communication by using a chain of coupled chaotic maps. We compare the performances of this type of spatiotemporal chaotic code with those of a conventional code used frequently in digital communication, the Gold code, and demonstrate that our code is comparable or even superior to the Gold code in several key aspects: security, bit error rate, code generation speed, and the number of possible code sequences. As the field of communicating with chaos faces doubts in terms of performance comparison with conventional digital communication schemes, our work gives a clear message that communicating with chaos can be advantageous and it deserves further attention from the nonlinear science community
CONSUL code package application for LMFR core calculations
Energy Technology Data Exchange (ETDEWEB)
Chibinyaev, A.V.; Teplov, P.S.; Frolova, M.V. [RNC ' Kurchatovskiy institute' , Kurchatov sq.1, Moscow (Russian Federation)
2008-07-01
CONSUL code package designed for the calculation of reactor core characteristics has been developed at the beginning of 90's. The calculation of nuclear reactor core characteristics is carried out on the basis of correlated neutron, isotope and temperature distributions. The code package has been generally used for LWR core characteristics calculations. At present CONSUL code package was adapted to calculate liquid metal fast reactors (LMFR). The comparisons with IAEA computational test 'Evaluation of benchmark calculations on a fast power reactor core with near zero sodium void effect' and BN-1800 testing calculations are presented in the paper. The IAEA benchmark core is based on the innovative core concept with sodium plenum above the core BN-800. BN-1800 core is the next development step which is foreseen for the Russian fast reactor concept. The comparison of the operational parameters has shown good agreement and confirms the possibility of CONSUL code package application for LMFR core calculation. (authors)
SEVERAL OBSERVATIONS REGARDING THE REGULATION OF THE CONTRACT OF PARTNERSHIP IN THE NEW CIVIL CODE
Directory of Open Access Journals (Sweden)
IOLANDA-ELENA CADARIU-LUNGU
2012-05-01
Full Text Available Following the model of the Italian Civil Code, of the Civil Code from Quebec, the Swiss and the Dutch ones, the new Romanian Civil Code has adopted the monist conception of regulating the private law relationships, gathering in the same normative act traditional civil law dispositions as well as dispositions that are specific to the commercial relationships among professionals. In this regulating context, one of the fundamental changes the new Civil Code brings is the unification of the legal regime applicable to civil and commercial contracts, with all the consequences that derive from this new legislative approach. This fundamental modification is first determined by the profound change of the character of social, economic and juridical relationships, by the change of the cultural level of the Romanian society, by the closeness of the two branches of civil and commercial law and, last but not least, by the evolution of the business environment. In this line of thought, we can identify important changes in the matter of the contract of partnership which, as regulated by the new Civil Code, constitutes the common law both for the simple partnerships (former civil societies as well as for the commercial companies, to which the special legislation still in force in the matter still applies. In this study we aimed at analyzing the general common features of all associative forms listed by art. 1.888 Civil Code and the new elements in the matter, with critical observations where needed, which take the form of a comparison with the specific legislation in the field from the Civil Codes that served as a source of inspiration for the Romanian legislator.
Building a dynamic code to simulate new reactor concepts
International Nuclear Information System (INIS)
Catsaros, N.; Gaveau, B.; Jaekel, M.-T.; Maillard, J.; Maurel, G.; Savva, P.; Silva, J.; Varvayanni, M.
2012-01-01
Highlights: ► We develop a stochastic neutronic code based on an existing High Energy Physics code. ► The code simulates innovative reactor designs including Accelerator Driven Systems. ► Core materials evolution will be dynamically simulated, including fuel burnup. ► Continuous feedback between the main inter-related parameters will be established. ► A description of the current research development and achievements is also given. - Abstract: Innovative nuclear reactor designs have been proposed, such as the Accelerator Driven Systems (ADSs), the “candle” reactors, etc. These reactor designs introduce computational nuclear technology problems the solution of which necessitates a new, global and dynamic computational approach of the system. A continuous feedback procedure must be established between the main inter-related parameters of the system such as the chemical, physical and isotopic composition of the core, the neutron flux distribution and the temperature field. Furthermore, as far as ADSs are concerned, the ability of the computational tool to simulate the nuclear cascade created from the interaction of accelerated protons with the spallation target as well as the produced neutrons, is also required. The new Monte Carlo code ANET (Advanced Neutronics with Evolution and Thermal hydraulic feedback) is being developed based on the GEANT3 High Energy Physics code, aiming to progressively satisfy all the above requirements. A description of the capabilities and methodologies implemented in the present version of ANET is given here, together with some illustrative applications of the code.
A Python Calculator for Supernova Remnant Evolution
Leahy, D. A.; Williams, J. E.
2017-05-01
A freely available Python code for modeling supernova remnant (SNR) evolution has been created. This software is intended for two purposes: to understand SNR evolution and to use in modeling observations of SNR for obtaining good estimates of SNR properties. It includes all phases for the standard path of evolution for spherically symmetric SNRs. In addition, alternate evolutionary models are available, including evolution in a cloudy ISM, the fractional energy-loss model, and evolution in a hot low-density ISM. The graphical interface takes in various parameters and produces outputs such as shock radius and velocity versus time, as well as SNR surface brightness profile and spectrum. Some interesting properties of SNR evolution are demonstrated using the program.
Thermal-hydraulic codes validation for safety analysis of NPPs with RBMK
International Nuclear Information System (INIS)
Brus, N.A.; Ioussoupov, O.E.
2000-01-01
This work is devoted to validation of western thermal-hydraulic codes (RELAP5/MOD3 .2 and ATHLET 1.1 Cycle C) in application to Russian designed light water reactors. Such validation is needed due to features of RBMK reactor design and thermal-hydraulics in comparison with PWR and BWR reactors, for which these codes were developed and validated. These validation studies are concluded with a comparison of calculation results of modeling with the thermal-hydraulics codes with the experiments performed earlier using the thermal-hydraulics test facilities with the experimental data. (authors)
Comparison of three gamma ray isotopic determination codes: FRAM, MGA, and TRIFID
International Nuclear Information System (INIS)
Cremers, T.L.; Malcom, J.E.; Bonner, C.A.
1994-01-01
The determination of the isotopic distribution of plutonium and the americium concentration is required for the assay of nuclear material by calorimetry or neutron coincidence counting. The isotopic information is used in calorimetric assay to compute the effective specific power from the measured isotopic fractions and the known specific power of each isotope. The effective specific power is combined with the heat measurement to obtain the mass of plutonium in the assayed nuclear material. The response of neutron coincidence counters is determined by the 240 Pu isotopic fraction with contributions from the other even plutonium isotopes. The effect of the 240 Pu isotopic fraction and the other neutron contributing isotopes are combined as 240 Pu effective. This is used to calculate the mass of nuclear material from the neutron counting data in a manner analogous to the effective specific power in calorimeter. Comparisons of the precision and accuracy of calorimetric assay and neutron coincidence counting often focus only on the precision and accuracy of the heat measurement (calorimetry) compared to the precision and accuracy of the neutron coincidence counting statistics. The major source of uncertainty for both calorimetric assay and neutron coincidence counting often lies in the determination of the plutonium isotopic distribution ad determined by gamma ray spectroscopy. Thus, the selection of the appropriate isotopic distribution code is of paramount importance to good calorimetric assay and neutron coincidence counting. Three gamma ray isotopic distribution codes, FRAM, MGA, and TRIFID have been compared at the Los Alamos Plutonium Facility under carefully controlled conditions of similar count rates, count times, and 240 Pu isotopic fraction
Short-Block Protograph-Based LDPC Codes
Divsalar, Dariush; Dolinar, Samuel; Jones, Christopher
2010-01-01
Short-block low-density parity-check (LDPC) codes of a special type are intended to be especially well suited for potential applications that include transmission of command and control data, cellular telephony, data communications in wireless local area networks, and satellite data communications. [In general, LDPC codes belong to a class of error-correcting codes suitable for use in a variety of wireless data-communication systems that include noisy channels.] The codes of the present special type exhibit low error floors, low bit and frame error rates, and low latency (in comparison with related prior codes). These codes also achieve low maximum rate of undetected errors over all signal-to-noise ratios, without requiring the use of cyclic redundancy checks, which would significantly increase the overhead for short blocks. These codes have protograph representations; this is advantageous in that, for reasons that exceed the scope of this article, the applicability of protograph representations makes it possible to design highspeed iterative decoders that utilize belief- propagation algorithms.
Design evaluation on sodium piping system and comparison of the design codes
International Nuclear Information System (INIS)
Lee, Dong Won; Jeong, Ji Young; Lee, Yong Bum; Lee, Hyeong Yeon
2015-01-01
A large-scale sodium test loop of STELLA-1 (Sodium integral effect test loop for safety simulation and assessment) with two main piping systems has been installed at KAERI. In this study, design evaluations on the main sodium piping systems in STELLA-1 have been conducted according to the DBR (design by rule) codes of the ASME B31.1 and RCC-MRx RB-3600. In addition, design evaluations according to the DBA (design by analysis) code of the ASME Section III Subsection NB-3200 have been conducted. The evaluation results for the present piping systems showed that results from the DBR codes were more conservative than those from the DBA code, and among the DBR codes, the non-nuclear code of the ASME B31.1 was more conservative than the French nuclear DBR code of the RCC-MRx RB-3600. The conservatism on the DBR codes of the ASME B31.1 and RCC-MRx RB-3600 was quantified based on the present sodium piping analyses.
Design evaluation on sodium piping system and comparison of the design codes
Energy Technology Data Exchange (ETDEWEB)
Lee, Dong Won; Jeong, Ji Young; Lee, Yong Bum; Lee, Hyeong Yeon [KAERI, Daejeon (Korea, Republic of)
2015-03-15
A large-scale sodium test loop of STELLA-1 (Sodium integral effect test loop for safety simulation and assessment) with two main piping systems has been installed at KAERI. In this study, design evaluations on the main sodium piping systems in STELLA-1 have been conducted according to the DBR (design by rule) codes of the ASME B31.1 and RCC-MRx RB-3600. In addition, design evaluations according to the DBA (design by analysis) code of the ASME Section III Subsection NB-3200 have been conducted. The evaluation results for the present piping systems showed that results from the DBR codes were more conservative than those from the DBA code, and among the DBR codes, the non-nuclear code of the ASME B31.1 was more conservative than the French nuclear DBR code of the RCC-MRx RB-3600. The conservatism on the DBR codes of the ASME B31.1 and RCC-MRx RB-3600 was quantified based on the present sodium piping analyses.
Santos, José; Monteagudo, Ángel
2017-03-27
The canonical code, although prevailing in complex genomes, is not universal. It was shown the canonical genetic code superior robustness compared to random codes, but it is not clearly determined how it evolved towards its current form. The error minimization theory considers the minimization of point mutation adverse effect as the main selection factor in the evolution of the code. We have used simulated evolution in a computer to search for optimized codes, which helps to obtain information about the optimization level of the canonical code in its evolution. A genetic algorithm searches for efficient codes in a fitness landscape that corresponds with the adaptability of possible hypothetical genetic codes. The lower the effects of errors or mutations in the codon bases of a hypothetical code, the more efficient or optimal is that code. The inclusion of the fitness sharing technique in the evolutionary algorithm allows the extent to which the canonical genetic code is in an area corresponding to a deep local minimum to be easily determined, even in the high dimensional spaces considered. The analyses show that the canonical code is not in a deep local minimum and that the fitness landscape is not a multimodal fitness landscape with deep and separated peaks. Moreover, the canonical code is clearly far away from the areas of higher fitness in the landscape. Given the non-presence of deep local minima in the landscape, although the code could evolve and different forces could shape its structure, the fitness landscape nature considered in the error minimization theory does not explain why the canonical code ended its evolution in a location which is not an area of a localized deep minimum of the huge fitness landscape.
International Nuclear Information System (INIS)
Reuss, P.
1997-01-01
The evolution of the concepts and methods used for describing neutronics through the last thirty years is reviewed, with the important role attributed to computer technology and the capacity to perform more precise calculations and models; the various codes such as HETAIRE and APOLLO, used for the Boltzmann equation, are discussed, together with the calculation methods and theories that gain interest or those which were more or less discarded depending on the modelling capacities and nuclear industry choices. The role of experimentations is still essential for neutronics, in order to supply data when theory or data are limited or to validate models and codes. Trends are with structured and modular codes integrating all the know-how of a domain and with increased cooperation with other sectors such as thermohydraulics, thermomechanics, etc
The analysis of thermal-hydraulic models in MELCOR code
Energy Technology Data Exchange (ETDEWEB)
Kim, M H; Hur, C; Kim, D K; Cho, H J [POhang Univ., of Science and TECHnology, Pohang (Korea, Republic of)
1996-07-15
The objective of the present work is to verify the prediction and analysis capability of MELCOR code about the progression of severe accidents in light water reactor and also to evaluate appropriateness of thermal-hydraulic models used in MELCOR code. Comparing the results of experiment and calculation with MELCOR code is carried out to achieve the above objective. Specially, the comparison between the CORA-13 experiment and the MELCOR code calculation was performed.
International Nuclear Information System (INIS)
Bunz, H.; Dunbar, L.H.; Fermandjian, J.; Lhiaubet, G.
1987-11-01
An aerosol code comparison exercise was performed within the framework of the Commission of European Communities (Division of Safety of Nuclear Installations). This exercise, focused on the process of steam condensation onto the aerosols occurring in PWR containment buildings during severe core damage accidents, has allowed to understand the discrepancies between the results obtained. These discrepancies are due, in particular, to whether the curvature effect is modelled or not in the codes
Assessment of the IVA3 code for multifield flow simulation. Formal report
Energy Technology Data Exchange (ETDEWEB)
Stewart, H.B.
1995-07-01
This report presents an assessment of the IVA3 computer code for multifield flow simulation, as applied to the premixing phase of a hypothetical steam explosion in a water-cooled power reactor. The first section of this report reviews the derivation of the basic partial differential equations of multifield modeling, with reference to standard practices in the multiphase flow literature. Basic underlying assumptions and approximations are highlighted, and comparison is made between IVA3 and other codes in current use. Although Kolev`s derivation of these equations is outside the mainstream of the multiphase literature, the basic partial differential equations are in fact nearly equivalent to those in other codes. In the second section, the assumptions and approximations required to pass from generic differential equations to a specific working form are detailed. Some modest improvements to the IVA3 model are suggested. In Section 3, the finite difference approximations to the differential equations are described. The discretization strategy is discussed with reference to numerical stability, accuracy, and the role of various physical phenomena - material convection, sonic propagation, viscous stress, and interfacial exchanges - in the choice of discrete approximations. There is also cause for concern about the approximations of time evolution in some heat transfer terms, which might be adversely affecting numerical accuracy. The fourth section documents the numerical solution method used in IVA3. An explanation for erratic behavior sometimes observed in the first outer iteration is suggested, along with possible remedies. Finally, six recommendations for future assessment and improvement of the IVA3 model and code are made.
Shadowfax: Moving mesh hydrodynamical integration code
Vandenbroucke, Bert
2016-05-01
Shadowfax simulates galaxy evolution. Written in object-oriented modular C++, it evolves a mixture of gas, subject to the laws of hydrodynamics and gravity, and any collisionless fluid only subject to gravity, such as cold dark matter or stars. For the hydrodynamical integration, it makes use of a (co-) moving Lagrangian mesh. The code has a 2D and 3D version, contains utility programs to generate initial conditions and visualize simulation snapshots, and its input/output is compatible with a number of other simulation codes, e.g. Gadget2 (ascl:0003.001) and GIZMO (ascl:1410.003).
Quasistatic evolution of compact toroids
International Nuclear Information System (INIS)
Sgro, A.G.; Spencer, R.L.; Lilliequist, C.
1981-01-01
Some results are presented of simulations of the post formation evolution of compact toroids. The simulations were performed with a 1-1/2 D transport code. Such a code makes explicit use of the fact that the shapes of the flux surfaces in the plasma change much more slowly than do the profiles of the physical variables across the flux surfaces. Consequently, assuming that the thermodynamic variables are always equilibrated on a flux surface, one may calculate the time evolution of these profiles as a function of a single variable that labels the flux surfaces. Occasionally, during the calculation these profiles are used to invert the equilibrium equation to update the shapes of the flux surfaces. In turn, these shapes imply certain geometric cofficients, such as A = 2 >, which contain the geometric information required by the 1-D equations
Evolution of White Dwarf Stars
L. G. Althaus
2001-01-01
This paper is aimed at presenting the main results we have obtained for the study of the evoution of white dwarf stars. The calculations are carried out by means of a detailed evolutionary code based on an updated physical description. In particular, we briefly discuss the results for the evolution of white dwarfs of different stellar masses and chemical composition, and the evolution of whit e dwarfs in the framework of a varying gravitational constant G scenario as well.
Comparison of two-dimensional and three-dimensional MHD equilibrium and stability codes
International Nuclear Information System (INIS)
Herrnegger, F.; Merkel, P.; Johnson, J.L.
1986-02-01
Stability results obtained with the fully three-dimensional magnetohydrodynamic code BETA, the helically invariant code HERA, and the asymptotic stellarator expansion code STEP agree well for a straight l = 2, M = 5 stellarator model. This good agreement between the BETA and STEP codes persists as toroidal curvature is introduced. This validation provides justification for confidence in work with these models. 20 refs., 11 figs
(U) Ristra Next Generation Code Report
Energy Technology Data Exchange (ETDEWEB)
Hungerford, Aimee L. [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Daniel, David John [Los Alamos National Lab. (LANL), Los Alamos, NM (United States)
2017-09-22
LANL’s Weapons Physics management (ADX) and ASC program office have defined a strategy for exascale-class application codes that follows two supportive, and mutually risk-mitigating paths: evolution for established codes (with a strong pedigree within the user community) based upon existing programming paradigms (MPI+X); and Ristra (formerly known as NGC), a high-risk/high-reward push for a next-generation multi-physics, multi-scale simulation toolkit based on emerging advanced programming systems (with an initial focus on data-flow task-based models exemplified by Legion [5]). Development along these paths is supported by the ATDM, IC, and CSSE elements of the ASC program, with the resulting codes forming a common ecosystem, and with algorithm and code exchange between them anticipated. Furthermore, solution of some of the more challenging problems of the future will require a federation of codes working together, using established-pedigree codes in partnership with new capabilities as they come on line. The role of Ristra as the high-risk/high-reward path for LANL’s codes is fully consistent with its role in the Advanced Technology Development and Mitigation (ATDM) sub-program of ASC (see Appendix C), in particular its emphasis on evolving ASC capabilities through novel programming models and data management technologies.
Coding training for medical students: How good is diagnoses coding with ICD-10 by novices?
Directory of Open Access Journals (Sweden)
Stausberg, Jürgen
2005-04-01
Full Text Available Teaching of knowledge and competence in documentation and coding is an essential part of medical education. Therefore, coding training had been placed within the course of epidemiology, medical biometry, and medical informatics. From this, we can draw conclusions about the quality of coding by novices. One hundred and eighteen students coded diagnoses from 15 nephrological cases in homework. In addition to interrater reliability, validity was calculated by comparison with a reference coding. On the level of terminal codes, 59.3% of the students' results were correct. The completeness was calculated as 58.0%. The results on the chapter level increased up to 91.5% and 87.7% respectively. For the calculation of reliability a new, simple measure was developed that leads to values of 0.46 on the level of terminal codes and 0.87 on the chapter level for interrater reliability. The figures of concordance with the reference coding are quite similar. In contrary, routine data show considerably lower results with 0.34 and 0.63 respectively. Interrater reliability and validity of coding by novices is as good as coding by experts. The missing advantage of experts could be explained by the workload of documentation and a negative attitude to coding on the one hand. On the other hand, coding in a DRG-system is handicapped by a large number of detailed coding rules, which do not end in uniform results but rather lead to wrong and random codes. Anyway, students left the course well prepared for coding.
The "periodic table" of the genetic code: A new way to look at the code and the decoding process.
Komar, Anton A
2016-01-01
Henri Grosjean and Eric Westhof recently presented an information-rich, alternative view of the genetic code, which takes into account current knowledge of the decoding process, including the complex nature of interactions between mRNA, tRNA and rRNA that take place during protein synthesis on the ribosome, and it also better reflects the evolution of the code. The new asymmetrical circular genetic code has a number of advantages over the traditional codon table and the previous circular diagrams (with a symmetrical/clockwise arrangement of the U, C, A, G bases). Most importantly, all sequence co-variances can be visualized and explained based on the internal logic of the thermodynamics of codon-anticodon interactions.
Testing numerical evolution with the shifted gauge wave
Energy Technology Data Exchange (ETDEWEB)
Babiuc, Maria C [Department of Physics and Astronomy, University of Pittsburgh, Pittsburgh, PA 15260 (United States); Szilagyi, Bela [Max-Planck-Institut fuer Gravitationsphysik, Albert-Einstein-Institut, 14476 Golm (Germany); Winicour, Jeffrey [Department of Physics and Astronomy, University of Pittsburgh, Pittsburgh, PA 15260 (United States)
2006-08-21
Computational methods are essential to provide waveforms from coalescing black holes, which are expected to produce strong signals for the gravitational wave observatories being developed. Although partial simulations of the coalescence have been reported, scientifically useful waveforms have so far not been delivered. The goal of the AppleswithApples (AwA) Alliance is to design, coordinate and document standardized code tests for comparing numerical relativity codes. The first round of AwA tests has now been completed and the results are being analysed. These initial tests are based upon the periodic boundary conditions designed to isolate performance of the main evolution code. Here we describe and carry out an additional test with periodic boundary conditions which deals with an essential feature of the black hole excision problem, namely a non-vanishing shift. The test is a shifted version of the existing AwA gauge wave test. We show how a shift introduces an exponentially growing instability which violates the constraints of a standard harmonic formulation of Einstein's equations. We analyse the Cauchy problem in a harmonic gauge and discuss particular options for suppressing instabilities in the gauge wave tests. We implement these techniques in a finite difference evolution algorithm and present test results. Although our application here is limited to a model problem, the techniques should benefit the simulation of black holes using harmonic evolution codes.
The intercomparison of aerosol codes
International Nuclear Information System (INIS)
Dunbar, I.H.; Fermandjian, J.; Gauvain, J.
1988-01-01
The behavior of aerosols in a reactor containment vessel following a severe accident could be an important determinant of the accident source term to the environment. Various processes result in the deposition of the aerosol onto surfaces within the containment, from where they are much less likely to be released. Some of these processes are very sensitive to particle size, so it is important to model the aerosol growth processes: agglomeration and condensation. A number of computer codes have been written to model growth and deposition processes. They have been tested against each other in a series of code comparison exercises. These exercises have investigated sensitivities to physical and numerical assumptions and have also proved a useful means of quality control for the codes. Various exercises in which code predictions are compared with experimental results are now under way
Woods, Carl T; Keller, Brad S; McKeown, Ian; Robertson, Sam
2016-09-01
Woods, CT, Keller, BS, McKeown, I, and Robertson, S. A comparison of athletic movement among talent-identified juniors from different football codes in Australia: implications for talent development. J Strength Cond Res 30(9): 2440-2445, 2016-This study aimed to compare the athletic movement skill of talent-identified (TID) junior Australian Rules football (ARF) and soccer players. The athletic movement skill of 17 TID junior ARF players (17.5-18.3 years) was compared against 17 TID junior soccer players (17.9-18.7 years). Players in both groups were members of an elite junior talent development program within their respective football codes. All players performed an athletic movement assessment that included an overhead squat, double lunge, single-leg Romanian deadlift (both movements performed on right and left legs), a push-up, and a chin-up. Each movement was scored across 3 essential assessment criteria using a 3-point scale. The total score for each movement (maximum of 9) and the overall total score (maximum of 63) were used as the criterion variables for analysis. A multivariate analysis of variance tested the main effect of football code (2 levels) on the criterion variables, whereas a 1-way analysis of variance identified where differences occurred. A significant effect was noted, with the TID junior ARF players outscoring their soccer counterparts when performing the overhead squat and push-up. No other criterions significantly differed according to the main effect. Practitioners should be aware that specific sporting requirements may incur slight differences in athletic movement skill among TID juniors from different football codes. However, given the low athletic movement skill noted in both football codes, developmental coaches should address the underlying movement skill capabilities of juniors when prescribing physical training in both codes.
LDPC Code Design for Nonuniform Power-Line Channels
Directory of Open Access Journals (Sweden)
Sanaei Ali
2007-01-01
Full Text Available We investigate low-density parity-check code design for discrete multitone channels over power lines. Discrete multitone channels are well modeled as nonuniform channels, that is, different bits experience various channel parameters. We propose a coding system for discrete multitone channels that allows for using a single code over a nonuniform channel. The number of code parameters for the proposed system is much greater than the number of code parameters in conventional channel. Therefore, search-based optimization methods are impractical. We first formulate the problem of optimizing the rate of an irregular low-density parity-check code, with guaranteed convergence over a general nonuniform channel, as an iterative linear programming which is significantly more efficient than search-based methods. Then we use this technique for a typical power-line channel. The methodology of this paper is directly applicable to all decoding algorithms for which a density evolution analysis is possible.
EVOLUTION OF THE BINARY FRACTION IN DENSE STELLAR SYSTEMS
International Nuclear Information System (INIS)
Fregeau, John M.; Ivanova, Natalia; Rasio, Frederic A.
2009-01-01
Using our recently improved Monte Carlo evolution code, we study the evolution of the binary fraction in globular clusters. In agreement with previous N-body simulations, we find generally that the hard binary fraction in the core tends to increase with time over a range of initial cluster central densities for initial binary fractions ∼<90%. The dominant processes driving the evolution of the core binary fraction are mass segregation of binaries into the cluster core and preferential destruction of binaries there. On a global scale, these effects and the preferential tidal stripping of single stars tend to roughly balance, leading to overall cluster binary fractions that are roughly constant with time. Our findings suggest that the current hard binary fraction near the half-mass radius is a good indicator of the hard primordial binary fraction. However, the relationship between the true binary fraction and the fraction of main-sequence stars in binaries (which is typically what observers measure) is nonlinear and rather complicated. We also consider the importance of soft binaries, which not only modify the evolution of the binary fraction, but can also drastically change the evolution of the cluster as a whole. Finally, we briefly describe the recent addition of single and binary stellar evolution to our cluster evolution code.
An axisymmetric gravitational collapse code
Energy Technology Data Exchange (ETDEWEB)
Choptuik, Matthew W [CIAR Cosmology and Gravity Program, Department of Physics and Astronomy, University of British Columbia, Vancouver BC, V6T 1Z1 (Canada); Hirschmann, Eric W [Department of Physics and Astronomy, Brigham Young University, Provo, UT 84604 (United States); Liebling, Steven L [Southampton College, Long Island University, Southampton, NY 11968 (United States); Pretorius, Frans [Theoretical Astrophysics, California Institute of Technology, Pasadena, CA 91125 (United States)
2003-05-07
We present a new numerical code designed to solve the Einstein field equations for axisymmetric spacetimes. The long-term goal of this project is to construct a code that will be capable of studying many problems of interest in axisymmetry, including gravitational collapse, critical phenomena, investigations of cosmic censorship and head-on black-hole collisions. Our objective here is to detail the (2+1)+1 formalism we use to arrive at the corresponding system of equations and the numerical methods we use to solve them. We are able to obtain stable evolution, despite the singular nature of the coordinate system on the axis, by enforcing appropriate regularity conditions on all variables and by adding numerical dissipation to hyperbolic equations.
An axisymmetric gravitational collapse code
International Nuclear Information System (INIS)
Choptuik, Matthew W; Hirschmann, Eric W; Liebling, Steven L; Pretorius, Frans
2003-01-01
We present a new numerical code designed to solve the Einstein field equations for axisymmetric spacetimes. The long-term goal of this project is to construct a code that will be capable of studying many problems of interest in axisymmetry, including gravitational collapse, critical phenomena, investigations of cosmic censorship and head-on black-hole collisions. Our objective here is to detail the (2+1)+1 formalism we use to arrive at the corresponding system of equations and the numerical methods we use to solve them. We are able to obtain stable evolution, despite the singular nature of the coordinate system on the axis, by enforcing appropriate regularity conditions on all variables and by adding numerical dissipation to hyperbolic equations
SIGNUM: A Matlab, TIN-based landscape evolution model
Refice, A.; Giachetta, E.; Capolongo, D.
2012-08-01
Several numerical landscape evolution models (LEMs) have been developed to date, and many are available as open source codes. Most are written in efficient programming languages such as Fortran or C, but often require additional code efforts to plug in to more user-friendly data analysis and/or visualization tools to ease interpretation and scientific insight. In this paper, we present an effort to port a common core of accepted physical principles governing landscape evolution directly into a high-level language and data analysis environment such as Matlab. SIGNUM (acronym for Simple Integrated Geomorphological Numerical Model) is an independent and self-contained Matlab, TIN-based landscape evolution model, built to simulate topography development at various space and time scales. SIGNUM is presently capable of simulating hillslope processes such as linear and nonlinear diffusion, fluvial incision into bedrock, spatially varying surface uplift which can be used to simulate changes in base level, thrust and faulting, as well as effects of climate changes. Although based on accepted and well-known processes and algorithms in its present version, it is built with a modular structure, which allows to easily modify and upgrade the simulated physical processes to suite virtually any user needs. The code is conceived as an open-source project, and is thus an ideal tool for both research and didactic purposes, thanks to the high-level nature of the Matlab environment and its popularity among the scientific community. In this paper the simulation code is presented together with some simple examples of surface evolution, and guidelines for development of new modules and algorithms are proposed.
Energy Technology Data Exchange (ETDEWEB)
Jobst, Matthias; Kliem, Soeren; Kozmenkov, Yaroslav; Wilhelm, Polina
2017-02-15
Within the framework of the project an ATHLET-CD input deck for a generic German PWR of type KONVOI has been created. This input deck was applied to the simulation of severe accidents from the accident categories station blackout (SBO) and small-break loss-of-coolant accidents (SBLOCA). The complete accident transient from initial event at full power until the damage of reactor pressure vessel (RPV) is covered and all relevant severe accident phenomena are modelled: start of core heat up, fission product release, melting of fuel and absorber material, oxidation and release of hydrogen, relocation of molten material inside the core, relocation to the lower plenum, damage and failure of the RPV. The model has been applied to the analysis of preventive and mitigative accident management measures for SBO and SBLOCA transients. Therefore, the measures primary side depressurization (PSD), injection to the primary circuit by mobile pumps and for SBLOCA the delayed injection by the cold leg hydro-accumulators have been investigated and the assumptions and start criteria of these measures have been varied. The time evolutions of the transients and time margins for the initiation of additional measures have been assessed. An uncertainty and sensitivity study has been performed for the early phase of one SBO scenario with PSD (until the start of core melt). In addition to that, a code -to-code comparison between ATHLET-CD and the severe accident code MELCOR has been carried out.
CHOLLA: A NEW MASSIVELY PARALLEL HYDRODYNAMICS CODE FOR ASTROPHYSICAL SIMULATION
International Nuclear Information System (INIS)
Schneider, Evan E.; Robertson, Brant E.
2015-01-01
We present Computational Hydrodynamics On ParaLLel Architectures (Cholla ), a new three-dimensional hydrodynamics code that harnesses the power of graphics processing units (GPUs) to accelerate astrophysical simulations. Cholla models the Euler equations on a static mesh using state-of-the-art techniques, including the unsplit Corner Transport Upwind algorithm, a variety of exact and approximate Riemann solvers, and multiple spatial reconstruction techniques including the piecewise parabolic method (PPM). Using GPUs, Cholla evolves the fluid properties of thousands of cells simultaneously and can update over 10 million cells per GPU-second while using an exact Riemann solver and PPM reconstruction. Owing to the massively parallel architecture of GPUs and the design of the Cholla code, astrophysical simulations with physically interesting grid resolutions (≳256 3 ) can easily be computed on a single device. We use the Message Passing Interface library to extend calculations onto multiple devices and demonstrate nearly ideal scaling beyond 64 GPUs. A suite of test problems highlights the physical accuracy of our modeling and provides a useful comparison to other codes. We then use Cholla to simulate the interaction of a shock wave with a gas cloud in the interstellar medium, showing that the evolution of the cloud is highly dependent on its density structure. We reconcile the computed mixing time of a turbulent cloud with a realistic density distribution destroyed by a strong shock with the existing analytic theory for spherical cloud destruction by describing the system in terms of its median gas density
CHOLLA: A NEW MASSIVELY PARALLEL HYDRODYNAMICS CODE FOR ASTROPHYSICAL SIMULATION
Energy Technology Data Exchange (ETDEWEB)
Schneider, Evan E.; Robertson, Brant E. [Steward Observatory, University of Arizona, 933 North Cherry Avenue, Tucson, AZ 85721 (United States)
2015-04-15
We present Computational Hydrodynamics On ParaLLel Architectures (Cholla ), a new three-dimensional hydrodynamics code that harnesses the power of graphics processing units (GPUs) to accelerate astrophysical simulations. Cholla models the Euler equations on a static mesh using state-of-the-art techniques, including the unsplit Corner Transport Upwind algorithm, a variety of exact and approximate Riemann solvers, and multiple spatial reconstruction techniques including the piecewise parabolic method (PPM). Using GPUs, Cholla evolves the fluid properties of thousands of cells simultaneously and can update over 10 million cells per GPU-second while using an exact Riemann solver and PPM reconstruction. Owing to the massively parallel architecture of GPUs and the design of the Cholla code, astrophysical simulations with physically interesting grid resolutions (≳256{sup 3}) can easily be computed on a single device. We use the Message Passing Interface library to extend calculations onto multiple devices and demonstrate nearly ideal scaling beyond 64 GPUs. A suite of test problems highlights the physical accuracy of our modeling and provides a useful comparison to other codes. We then use Cholla to simulate the interaction of a shock wave with a gas cloud in the interstellar medium, showing that the evolution of the cloud is highly dependent on its density structure. We reconcile the computed mixing time of a turbulent cloud with a realistic density distribution destroyed by a strong shock with the existing analytic theory for spherical cloud destruction by describing the system in terms of its median gas density.
A genetic code alteration is a phenotype diversity generator in the human pathogen Candida albicans.
Directory of Open Access Journals (Sweden)
Isabel Miranda
Full Text Available BACKGROUND: The discovery of genetic code alterations and expansions in both prokaryotes and eukaryotes abolished the hypothesis of a frozen and universal genetic code and exposed unanticipated flexibility in codon and amino acid assignments. It is now clear that codon identity alterations involve sense and non-sense codons and can occur in organisms with complex genomes and proteomes. However, the biological functions, the molecular mechanisms of evolution and the diversity of genetic code alterations remain largely unknown. In various species of the genus Candida, the leucine CUG codon is decoded as serine by a unique serine tRNA that contains a leucine 5'-CAG-3'anticodon (tRNA(CAG(Ser. We are using this codon identity redefinition as a model system to elucidate the evolution of genetic code alterations. METHODOLOGY/PRINCIPAL FINDINGS: We have reconstructed the early stages of the Candida genetic code alteration by engineering tRNAs that partially reverted the identity of serine CUG codons back to their standard leucine meaning. Such genetic code manipulation had profound cellular consequences as it exposed important morphological variation, altered gene expression, re-arranged the karyotype, increased cell-cell adhesion and secretion of hydrolytic enzymes. CONCLUSION/SIGNIFICANCE: Our study provides the first experimental evidence for an important role of genetic code alterations as generators of phenotypic diversity of high selective potential and supports the hypothesis that they speed up evolution of new phenotypes.
The Coding of Biological Information: From Nucleotide Sequence to Protein Recognition
Štambuk, Nikola
The paper reviews the classic results of Swanson, Dayhoff, Grantham, Blalock and Root-Bernstein, which link genetic code nucleotide patterns to the protein structure, evolution and molecular recognition. Symbolic representation of the binary addresses defining particular nucleotide and amino acid properties is discussed, with consideration of: structure and metric of the code, direct correspondence between amino acid and nucleotide information, and molecular recognition of the interacting protein motifs coded by the complementary DNA and RNA strands.
Comparison of codes and standards for radiographic inspection
International Nuclear Information System (INIS)
Bingoeldag, M. M.; Aksu, M.; Akguen, A. F.
1995-01-01
This report compares the procedurel requirements and acceptance criteria for radiographic inspections specified in the relevant national and international codes and standards. In particular, detailed analysis of inspection conditions such as exposure arrangements, and contrast requirements are given
García, Miguel A; Costea, Mihai; Kuzmina, Maria; Stefanović, Saša
2014-04-01
The parasitic genus Cuscuta, containing some 200 species circumscribed traditionally in three subgenera, is nearly cosmopolitan, occurring in a wide range of habitats and hosts. Previous molecular studies, on subgenera Grammica and Cuscuta, delimited major clades within these groups. However, the sequences used were unalignable among subgenera, preventing the phylogenetic comparison across the genus. We conducted a broad phylogenetic study using rbcL and nrLSU sequences covering the morphological, physiological, and geographical diversity of Cuscuta. We used parsimony methods to reconstruct ancestral states for taxonomically important characters. Biogeographical inferences were obtained using statistical and Bayesian approaches. Four well-supported major clades are resolved. Two of them correspond to subgenera Monogynella and Grammica. Subgenus Cuscuta is paraphyletic, with section Pachystigma sister to subgenus Grammica. Previously described cases of strongly supported discordance between plastid and nuclear phylogenies, interpreted as reticulation events, are confirmed here and three new cases are detected. Dehiscent fruits and globose stigmas are inferred as ancestral character states, whereas the ancestral style number is ambiguous. Biogeographical reconstructions suggest an Old World origin for the genus and subsequent spread to the Americas as a consequence of one long-distance dispersal. Hybridization may play an important yet underestimated role in the evolution of Cuscuta. Our results disagree with scenarios of evolution (polarity) previously proposed for several taxonomically important morphological characters, and with their usage and significance. While several cases of long-distance dispersal are inferred, vicariance or dispersal to adjacent areas emerges as the dominant biogeographical pattern.
Whether and Where to Code in the Wireless Relay Channel
DEFF Research Database (Denmark)
Shi, Xiaomeng; Médard, Muriel; Roetter, Daniel Enrique Lucani
2013-01-01
The throughput benefits of random linear network codes have been studied extensively for wirelined and wireless erasure networks. It is often assumed that all nodes within a network perform coding operations. In energy-constrained systems, however, coding subgraphs should be chosen to control...... the number of coding nodes while maintaining throughput. In this paper, we explore the strategic use of network coding in the wireless packet erasure relay channel according to both throughput and energy metrics. In the relay channel, a single source communicates to a single sink through the aid of a half......-duplex relay. The fluid flow model is used to describe the case where both the source and the relay are coding, and Markov chain models are proposed to describe packet evolution if only the source or only the relay is coding. In addition to transmission energy, we take into account coding and reception...
Energy Technology Data Exchange (ETDEWEB)
Banner, D; Crecy, F de
1993-06-01
The pseudo cubic Spline method (PCSM) is a statistical tool developed by the CEA. It is designed to analyse experimental points and in particular thermalhydraulic data. Predictors of the occurrence of critical heat flux are obtained by using Spline functions. In this paper, predictors have been computed from the same CHF databases by using two different flow analyses to derive local thermal-hydraulic variables at the CHF location. In fact, CEA`s FLICA-3M represents rod bundles by interconnected subchannels whereas EDF`s THYC code uses a porous 3D approach. In a first step, the PCSM is briefly presented as well as the two codes studied here. Then, the comparison methodology is explained in order to prove that advanced analysis of thermalhydraulic codes can be achieved with the PCSM. (authors). 6 figs., 2 tabs., 5 refs.
Development and validation of a fuel performance analysis code
International Nuclear Information System (INIS)
Majalee, Aaditya V.; Chaturvedi, S.
2015-01-01
CAD has been developing a computer code 'FRAVIZ' for calculation of steady-state thermomechanical behaviour of nuclear reactor fuel rods. It contains four major modules viz., Thermal module, Fission Gas Release module, Material Properties module and Mechanical module. All these four modules are coupled to each other and feedback from each module is fed back to others to get a self-consistent evolution in time. The computer code has been checked against two FUMEX benchmarks. Modelling fuel performance in Advance Heavy Water Reactor would require additional inputs related to the fuel and some modification in the code.(author)
Application of the three-dimensional Oak Ridge transport code
International Nuclear Information System (INIS)
Rhoades, W.A.; Childs, R.L.; Emmett, M.B.; Cramer, S.N.
1984-01-01
TORT, a 3-d extension of the DOT discrete ordinates transport code is now in production use for studies of radiation penetration into large concrete and masonry structures. This paper discusses certain features of the new code and shows representative results, including comparisons with Monte Carlo calculations
Energy Technology Data Exchange (ETDEWEB)
Albuquerque, M.A.G.; Ferreira, N.M.P.D., E-mail: malbuqueque@hotmail.co [Instituto Militar de Engenharia (IME), Rio de Janeiro, RJ (Brazil); Pires, E.; Ganizeu, M.D.; Almeida, C.E. de, E-mail: marianogd@uol.com.b [Universidade do Estado do Rio de Janeiro (UERJ), RJ (Brazil); Prizio, R.; Peixoto, J.G., E-mail: guilherm@ird.gov.b [Comissao Nacional de Energia Nuclear (CNEN), Rio de Janeiro, RJ (Brazil)
2009-07-01
The spectra simulated by the Penelope code were compared with the spectra experimentally obtained through the silicon PIN photodiode detector, and with spectra calculated by the code of IPEN, and the comparison exhibited a concordance of 93.3 %, and make them an option for study of X-ray spectroscopy in the voltage range used in mammography
Diversity and evolution of ABC proteins in basidiomycetes.
Kovalchuk, Andriy; Lee, Yong-Hwan; Asiegbu, Fred O
2013-01-01
ABC proteins constitute one of the largest families of proteins. They are implicated in wide variety of cellular processes ranging from ribosome biogenesis to multidrug resistance. With the advance of fungal genomics, the number of known fungal ABC proteins increases rapidly but the information on their biological functions remains scarce. In this work we extended the previous analysis of fungal ABC proteins to include recently sequenced species of basidiomycetes. We performed an identification and initial cataloging of ABC proteins from 23 fungal species representing 10 orders within class Agaricomycotina. We identified more than 1000 genes coding for ABC proteins. Comparison of sets of ABC proteins present in basidiomycetes and ascomycetes revealed the existence of two groups of ABC proteins specific for basidiomycetes. Results of survey should contribute to the better understanding of evolution of ABC proteins in fungi and support further experimental work on their characterization.
A simple model for binary star evolution
International Nuclear Information System (INIS)
Whyte, C.A.; Eggleton, P.P.
1985-01-01
A simple model for calculating the evolution of binary stars is presented. Detailed stellar evolution calculations of stars undergoing mass and energy transfer at various rates are reported and used to identify the dominant physical processes which determine the type of evolution. These detailed calculations are used to calibrate the simple model and a comparison of calculations using the detailed stellar evolution equations and the simple model is made. Results of the evolution of a few binary systems are reported and compared with previously published calculations using normal stellar evolution programs. (author)
National Research Council Canada - National Science Library
Yeh, Michelle; Wickens, Christopher D
2000-01-01
In a series of experiments, the use of color-coding, intensity coding, and decluttering were compared order to assess their potential benefits for accessing information from electronic map displays...
Predictive Bias and Sensitivity in NRC Fuel Performance Codes
Energy Technology Data Exchange (ETDEWEB)
Geelhood, Kenneth J.; Luscher, Walter G.; Senor, David J.; Cunningham, Mitchel E.; Lanning, Donald D.; Adkins, Harold E.
2009-10-01
The latest versions of the fuel performance codes, FRAPCON-3 and FRAPTRAN were examined to determine if the codes are intrinsically conservative. Each individual model and type of code prediction was examined and compared to the data that was used to develop the model. In addition, a brief literature search was performed to determine if more recent data have become available since the original model development for model comparison.
Reference results for time-like evolution up to O(α_s"3)
International Nuclear Information System (INIS)
Bertone, Valerio; Carrazza, Stefano; Nocera, Emanuele R.
2015-01-01
We present high-precision numerical results for time-like Dokshitzer-Gribov-Lipatov-Altarelli-Parisi evolution in the (MS)-bar factorisation scheme, for the first time up to next-to-next-to-leading order accuracy in quantum chromodynamics. First, we scrutinise the analytical expressions of the splitting functions available in the literature, in both x and N space, and check their mutual consistency. Second, we implement time-like evolution in two publicly available, entirely independent and conceptually different numerical codes, in x and N space respectively: the already existing APFEL code, which has been updated with time-like evolution, and the new MELA code, which has been specifically developed to perform the study in this work. Third, by means of a model for fragmentation functions, we provide results for the evolution in different factorisation schemes, for different ratios between renormalisation and factorisation scales and at different final scales. Our results are collected in the format of benchmark tables, which could be used as a reference for global determinations of fragmentation functions in the future.
Comparison of SAND-II and FERRET
International Nuclear Information System (INIS)
Wootan, D.W.; Schmittroth, F.
1981-01-01
A comparison was made of the advantages and disadvantages of two codes, SAND-II and FERRET, for determining the neutron flux spectrum and uncertainty from experimental dosimeter measurements as anticipated in the FFTF Reactor Characterization Program. This comparison involved an examination of the methodology and the operational performance of each code. The merits of each code were identified with respect to theoretical basis, directness of method, solution uniqueness, subjective influences, and sensitivity to various input parameters
Introduction of gadolinium in the library of Leopard code
International Nuclear Information System (INIS)
Claro, L.H.; Menezes, A.
1989-12-01
The materials Gd-154, Gd-155, Gd-156 and Gd-157 were included in the LEOPARD code library at the request of FURNAS Centrais Eletricas S.A. Results from comparison of LEOPARD and WIMSD/4 codes for a typical cell with 7 burnup steps, are presented. (author) [pt
International Nuclear Information System (INIS)
Hiergesell, R.; Taylor, G.
2010-01-01
An investigation was conducted to compare and evaluate contaminant transport results of two model codes, GoldSim and Porflow, using a simple 1-D string of elements in each code. Model domains were constructed to be identical with respect to cell numbers and dimensions, matrix material, flow boundary and saturation conditions. One of the codes, GoldSim, does not simulate advective movement of water; therefore the water flux term was specified as a boundary condition. In the other code, Porflow, a steady-state flow field was computed and contaminant transport was simulated within that flow-field. The comparisons were made solely in terms of the ability of each code to perform contaminant transport. The purpose of the investigation was to establish a basis for, and to validate follow-on work that was conducted in which a 1-D GoldSim model developed by abstracting information from Porflow 2-D and 3-D unsaturated and saturated zone models and then benchmarked to produce equivalent contaminant transport results. A handful of contaminants were selected for the code-to-code comparison simulations, including a non-sorbing tracer and several long- and short-lived radionuclides exhibiting both non-sorbing to strongly-sorbing characteristics with respect to the matrix material, including several requiring the simulation of in-growth of daughter radionuclides. The same diffusion and partitioning coefficients associated with each contaminant and the half-lives associated with each radionuclide were incorporated into each model. A string of 10-elements, having identical spatial dimensions and properties, were constructed within each code. GoldSim's basic contaminant transport elements, Mixing cells, were utilized in this construction. Sand was established as the matrix material and was assigned identical properties (e.g. bulk density, porosity, saturated hydraulic conductivity) in both codes. Boundary conditions applied included an influx of water at the rate of 40 cm/yr at one
Interdependence, Reflexivity, Fidelity, Impedance Matching, and the Evolution of Genetic Coding
Carter, Charles W; Wills, Peter R
2018-01-01
Abstract Genetic coding is generally thought to have required ribozymes whose functions were taken over by polypeptide aminoacyl-tRNA synthetases (aaRS). Two discoveries about aaRS and their interactions with tRNA substrates now furnish a unifying rationale for the opposite conclusion: that the key processes of the Central Dogma of molecular biology emerged simultaneously and naturally from simple origins in a peptide•RNA partnership, eliminating the epistemological utility of a prior RNA world. First, the two aaRS classes likely arose from opposite strands of the same ancestral gene, implying a simple genetic alphabet. The resulting inversion symmetries in aaRS structural biology would have stabilized the initial and subsequent differentiation of coding specificities, rapidly promoting diversity in the proteome. Second, amino acid physical chemistry maps onto tRNA identity elements, establishing reflexive, nanoenvironmental sensing in protein aaRS. Bootstrapping of increasingly detailed coding is thus intrinsic to polypeptide aaRS, but impossible in an RNA world. These notions underline the following concepts that contradict gradual replacement of ribozymal aaRS by polypeptide aaRS: 1) aaRS enzymes must be interdependent; 2) reflexivity intrinsic to polypeptide aaRS production dynamics promotes bootstrapping; 3) takeover of RNA-catalyzed aminoacylation by enzymes will necessarily degrade specificity; and 4) the Central Dogma’s emergence is most probable when replication and translation error rates remain comparable. These characteristics are necessary and sufficient for the essentially de novo emergence of a coupled gene–replicase–translatase system of genetic coding that would have continuously preserved the functional meaning of genetically encoded protein genes whose phylogenetic relationships match those observed today. PMID:29077934
Dynamical Evolution of Ring-Satellite Systems
Ohtsuki, Keiji
2005-01-01
The goal of this research was to understand dynamical processes related to the evolution of size distribution of particles in planetary rings and application of theoretical results to explain features in the present rings of giant planets. We studied velocity evolution and accretion rates of ring particles in the Roche zone. We developed a new numerical code for the evolution of ring particle size distribution, which takes into account the above results for particle velocity evolution and accretion rates. We also studied radial diffusion rate of ring particles due to inelastic collisions and gravitational encounters. Many of these results can be also applied to dynamical evolution of a planetesimal disk. Finally, we studied rotation rates of moonlets and particles in planetary rings, which would influence the accretional evolution of these bodies. We describe our key accomplishments during the past three years in more detail in the following.
Directory of Open Access Journals (Sweden)
James A. Shapiro
2016-06-01
Full Text Available The 21st century genomics-based analysis of evolutionary variation reveals a number of novel features impossible to predict when Dobzhansky and other evolutionary biologists formulated the neo-Darwinian Modern Synthesis in the middle of the last century. These include three distinct realms of cell evolution; symbiogenetic fusions forming eukaryotic cells with multiple genome compartments; horizontal organelle, virus and DNA transfers; functional organization of proteins as systems of interacting domains subject to rapid evolution by exon shuffling and exonization; distributed genome networks integrated by mobile repetitive regulatory signals; and regulation of multicellular development by non-coding lncRNAs containing repetitive sequence components. Rather than single gene traits, all phenotypes involve coordinated activity by multiple interacting cell molecules. Genomes contain abundant and functional repetitive components in addition to the unique coding sequences envisaged in the early days of molecular biology. Combinatorial coding, plus the biochemical abilities cells possess to rearrange DNA molecules, constitute a powerful toolbox for adaptive genome rewriting. That is, cells possess “Read–Write Genomes” they alter by numerous biochemical processes capable of rapidly restructuring cellular DNA molecules. Rather than viewing genome evolution as a series of accidental modifications, we can now study it as a complex biological process of active self-modification.
Dual Coding and Bilingual Memory.
Paivio, Allan; Lambert, Wallace
1981-01-01
Describes study which tested a dual coding approach to bilingual memory using tasks that permit comparison of the effects of bilingual encoding with verbal-nonverbal dual encoding items. Results provide strong support for a version of the independent or separate stories view of bilingual memory. (Author/BK)
RAID-6Plus: A Comprised Methodology for Extending RAID-6 Codes
Directory of Open Access Journals (Sweden)
Ming-Zhu Deng
2017-01-01
Full Text Available Existing RAID-6 code extensions assume that failures are independent and instantaneous, overlooking the underlying mechanism of multifailure occurrences. Also, the effect of reconstruction window is ignored. Additionally, these coding extensions have not been adapted to occurrence patterns of failure in real-world applications. As a result, the third parity drive is set to handle the triple-failure scenario; however, the lower level failure situations have been left unattended. Therefore, a new methodology of extending RAID-6 codes named RAID-6Plus with better compromise has been studied in this paper. RAID-6Plus (Deng et al., 2015 employs short combinations which can greatly reuse overlapped elements during reconstruction to remake the third parity drive. A sample extension code called RDP+ is given based on RDP. Moreover, we extended the study to present another extension example called X-code+ which has better update penalty and load balance. The analysis shows that RAID-6Plus is a balanced tradeoff of reliability, performance, and practicality. For instance, RDP+ could achieve speedups as high as 33.4% in comparison to the RTP with conventional rebuild, 11.9% in comparison to RTP with the optimal rebuild, 47.7% in comparison to STAR with conventional rebuild, and 26.2% for a single failure rebuild.
A NEM diffusion code for fuel management and time average core calculation
International Nuclear Information System (INIS)
Mishra, Surendra; Ray, Sherly; Kumar, A.N.
2005-01-01
A computer code based on Nodal expansion method has been developed for solving two groups three dimensional diffusion equation. This code can be used for fuel management and time average core calculation. Explicit Xenon and fuel temperature estimation are also incorporated in this code. TAPP-4 phase-B physics experimental results were analyzed using this code and a code based on FD method. This paper gives the comparison of the observed data and the results obtained with this code and FD code. (author)
International Nuclear Information System (INIS)
Chalhoub, E.S.; Moraes, M. de.
1984-01-01
A 70-group, 37-isotope library of multigroup constants for fast reactor nuclear design calculations is described. Nuclear cross sections, transfer matrices, and self-shielding factors were generated with NJOY code and an auxiliary program RGENDF using evaluated data from ENDF/B-IV. The output is being issued in a format suitable for EXPANDA code. Comparisons with JFS-2 library, as well as, test resuls for 14 CSEWG benchmark critical assemblies are presented. (Author) [pt
International Nuclear Information System (INIS)
Park, I. K.; Kim, J. H.; Hong, S. W.; Min, B. T.; Hong, S. H.; Song, J. H.; Kim, H. D.
2006-01-01
Since a steam explosion may breach the integrity of a reactor vessel and containment, it is one of the most important severe accident issues. So, a lot of experimental and analytical researches on steam explosions have been performed. Although many findings from the steam explosion researches have been obtained, there still exist unsolved issues such as the explosivity of the real core material(corium) and the conversion ratio from the thermal energy to the mechanical energy. TROI experiments were carried out to provide the experimental data for these issues. The TROI experiments were performed with a prototypic material such as ZrO 2 melt and a mixture of ZrO 2 and UO 2 melt (corium). Several steam explosion codes including TEXAS-V had been developed by considering the findings in the past steam explosion experiments. However, some unique findings on steam explosions have been obtained from a series of TROI experiments. These findings should be considered in the application to a reactor safety analysis by using a computational code. In this paper, several findings from TROI experiments are discussed and the sensitivity studies on the TROI experimental parameters were conducted by using TEXAS-V code and TROI-13 test. The comparison between the TROI experimental findings and the results of the sensitivity study might allow us to know which parameter is important and which model is uncertain for steam explosions
International Nuclear Information System (INIS)
Kalin, J.; Petkovsek, B.; Montarnal, Ph.; Genty, A.; Deville, E.; Krivic, J.; Ratej, J.
2011-01-01
In the past years the Slovenian Performance Analysis/Safety Assessment team has performed many generic studies for the future Slovenian low and intermediate level waste repository, most recently a Special Safety Analysis for the Krsko site. The modelling approach was to split the problem into three parts: near-field (detailed model of the repository), far-field (i.e., geosphere) and biosphere. In the Special Safety Analysis the code used to perform the near-field calculations was Hydrus2D. Recently the team has begun a cooperation with the French Commisariat al'Energie Atomique/Saclay (CEA/Saclay) and, as a part of this cooperation, began investigations into using the Alliances numerical platform for near-field calculations in order to compare the overall approach and calculated results. The article presents the comparison between these two codes for a silo-type repository that was considered in the Special Safety Analysis. The physical layout and characteristics of the repository are presented and a hydraulic and transport model of the repository is developed and implemented in Alliances. Some analysis of sensitivity to mesh fineness and to simulation timestep has been preformed and is also presented. The compared quantity is the output flux of radionuclides on the boundary of the model. Finally the results from Hydrus2D and Alliances are compared and the differences and similarities are commented.
Energy Technology Data Exchange (ETDEWEB)
Kalin, J., E-mail: jan.kalin@zag.s [Slovenian National Building and Civil Engineering Institute, Dimiceva 12, SI-1000 Ljubljana (Slovenia); Petkovsek, B., E-mail: borut.petkovsek@zag.s [Slovenian National Building and Civil Engineering Institute, Dimiceva 12, SI-1000 Ljubljana (Slovenia); Montarnal, Ph., E-mail: philippe.montarnal@cea.f [CEA/Saclay, DM2S/SFME/LSET, Gif-sur-Yvette, 91191 cedex (France); Genty, A., E-mail: alain.genty@cea.f [CEA/Saclay, DM2S/SFME/LSET, Gif-sur-Yvette, 91191 cedex (France); Deville, E., E-mail: estelle.deville@cea.f [CEA/Saclay, DM2S/SFME/LSET, Gif-sur-Yvette, 91191 cedex (France); Krivic, J., E-mail: jure.krivic@geo-zs.s [Geological Survey of Slovenia, Dimiceva 14, SI-1000 Ljubljana (Slovenia); Ratej, J., E-mail: joze.ratej@geo-zs.s [Geological Survey of Slovenia, Dimiceva 14, SI-1000 Ljubljana (Slovenia)
2011-04-15
In the past years the Slovenian Performance Analysis/Safety Assessment team has performed many generic studies for the future Slovenian low and intermediate level waste repository, most recently a Special Safety Analysis for the Krsko site. The modelling approach was to split the problem into three parts: near-field (detailed model of the repository), far-field (i.e., geosphere) and biosphere. In the Special Safety Analysis the code used to perform the near-field calculations was Hydrus2D. Recently the team has begun a cooperation with the French Commisariat al'Energie Atomique/Saclay (CEA/Saclay) and, as a part of this cooperation, began investigations into using the Alliances numerical platform for near-field calculations in order to compare the overall approach and calculated results. The article presents the comparison between these two codes for a silo-type repository that was considered in the Special Safety Analysis. The physical layout and characteristics of the repository are presented and a hydraulic and transport model of the repository is developed and implemented in Alliances. Some analysis of sensitivity to mesh fineness and to simulation timestep has been preformed and is also presented. The compared quantity is the output flux of radionuclides on the boundary of the model. Finally the results from Hydrus2D and Alliances are compared and the differences and similarities are commented.
Towards Effective Intra-flow Network Coding in Software Defined Wireless Mesh Networks
Directory of Open Access Journals (Sweden)
Donghai Zhu
2016-01-01
Full Text Available Wireless Mesh Networks (WMNs have potential to provide convenient broadband wireless Internet access to mobile users.With the support of Software-Defined Networking (SDN paradigm that separates control plane and data plane, WMNs can be easily deployed and managed. In addition, by exploiting the broadcast nature of the wireless medium and the spatial diversity of multi-hop wireless networks, intra-flow network coding has shown a greater benefit in comparison with traditional routing paradigms in data transmission for WMNs. In this paper, we develop a novel OpenCoding protocol, which combines the SDN technique with intra-flow network coding for WMNs. Our developed protocol can simplify the deployment and management of the network and improve network performance. In OpenCoding, a controller that works on the control plane makes routing decisions for mesh routers and the hop-by-hop forwarding function is replaced by network coding functions in data plane. We analyze the overhead of OpenCoding. Through a simulation study, we show the effectiveness of the OpenCoding protocol in comparison with existing schemes. Our data shows that OpenCoding outperforms both traditional routing and intra-flow network coding schemes.
The new lattice code Paragon and its qualification for PWR core applications
International Nuclear Information System (INIS)
Ouisloumen, M.; Huria, H.C.; Mayhue, L.T.; Smith, R.M.; Kichty, M.J.; Matsumoto, H.; Tahara, Y.
2003-01-01
Paragon is a new two-dimensional transport code based on collision probability with interface current method and written entirely in Fortran 90/95. The qualification of Paragon has been completed and the results are very good. This qualification included a number of critical experiments. Comparisons to the Monte Carlo code MCNP for a wide variety of PWR assembly lattice types were also performed. In addition, Paragon-based core simulator models have been compared against PWR plant startup and operational data for a large number of plants. Some results of these calculations and also comparisons against models developed with a licensed Westinghouse lattice code, Phoenix-P, are presented. The qualification described in this paper provided the basis for the qualification of Paragon both as a validated transport code and as the nuclear data source for core simulator codes
International Nuclear Information System (INIS)
Campolina, Daniel de Almeida Magalhaes
2009-01-01
In Many situations of nuclear system study, it is necessary to know the detailed particle flux in a geometry. Deterministic 1-D and 2-D methods aren't suitable to represent some strong 3-D behavior configurations, for example in cores where the neutron flux varies considerably in the space and Monte Carlo analysis are necessary. The majority of Monte Carlo transport calculation codes, performs time static simulations, in terms of fuel isotopic composition. This work is a initial project to incorporate depletion capability to the MCNP code, by means of a connection with ORIGEN2.1 burnup code. The method to develop the program proposed followed the methodology of other programs used to the same purpose. Essentially, MCNP data library are used to generate one group microscopic cross sections that override default ORIGEN libraries. To verify the actual implemented part, comparisons which MCNPX (version 2.6.0) results were made. The neutron flux and criticality value of core agree. The neutron flux and criticality value of the core agree, especially in beginning of burnup when the influence of fission products are not very considerable. The small difference encountered was probably caused by the difference in the number of isotopes considered in the transport models (89 MCNPX x 25 GB). Next step of this work is to adapt MCNP version 4C to work with a memory higher than its standard value (4MB), in order to allow a greater number of isotopes in the transport model. (author)
Flexibility of the genetic code with respect to DNA structure
DEFF Research Database (Denmark)
Baisnée, P. F.; Baldi, Pierre; Brunak, Søren
2001-01-01
Motivation. The primary function of DNA is to carry genetic information through the genetic code. DNA, however, contains a variety of other signals related, for instance, to reading frame, codon bias, pairwise codon bias, splice sites and transcription regulation, nucleosome positioning and DNA...... structure. Here we study the relationship between the genetic code and DNA structure and address two questions. First, to which degree does the degeneracy of the genetic code and the acceptable amino acid substitution patterns allow for the superimposition of DNA structural signals to protein coding...... sequences? Second, is the origin or evolution of the genetic code likely to have been constrained by DNA structure? Results. We develop an index for code flexibility with respect to DNA structure. Using five different di- or tri-nucleotide models of sequence-dependent DNA structure, we show...
Calculation of neutron spectra produced in neutron generator target: Code testing.
Gaganov, V V
2018-03-01
DT-neutron spectra calculated using the SRIANG code was benchmarked against the results obtained by widely used Monte Carlo codes: PROFIL, SHORIN, TARGET, ENEA-JSI, MCUNED, DDT and NEUSDESC. The comparison of the spectra obtained by different codes confirmed the correctness of SRIANG calculations. The cross-checking of the compared spectra revealed some systematic features and possible errors of analysed codes. Copyright © 2017 Elsevier Ltd. All rights reserved.
CFD code comparison for 2D airfoil flows
DEFF Research Database (Denmark)
Sørensen, Niels N.; Méndez, B.; Muñoz, A.
2016-01-01
The current paper presents the effort, in the EU AVATAR project, to establish the necessary requirements to obtain consistent lift over drag ratios among seven CFD codes. The flow around a 2D airfoil case is studied, for both transitional and fully turbulent conditions at Reynolds numbers of 3...
Energy Technology Data Exchange (ETDEWEB)
Aufiero, M.; Cammi, A.; Fiorina, C. [Politecnico di Milano, Department of Energy, CeSNEF (Enrico Fermi Center for Nuclear Studies), via Ponzio, 34/3, I-20133 Milano (Italy); Leppänen, J. [VTT Technical Research Centre of Finland, P.O. Box 1000, FI-02044 VTT (Finland); Luzzi, L., E-mail: lelio.luzzi@polimi.it [Politecnico di Milano, Department of Energy, CeSNEF (Enrico Fermi Center for Nuclear Studies), via Ponzio, 34/3, I-20133 Milano (Italy); Ricotti, M.E. [Politecnico di Milano, Department of Energy, CeSNEF (Enrico Fermi Center for Nuclear Studies), via Ponzio, 34/3, I-20133 Milano (Italy)
2013-10-15
In this work, the Monte Carlo burn-up code SERPENT-2 has been extended and employed to study the material isotopic evolution of the Molten Salt Fast Reactor (MSFR). This promising GEN-IV nuclear reactor concept features peculiar characteristics such as the on-line fuel reprocessing, which prevents the use of commonly available burn-up codes. Besides, the presence of circulating nuclear fuel and radioactive streams from the core to the reprocessing plant requires a precise knowledge of the fuel isotopic composition during the plant operation. The developed extension of SERPENT-2 directly takes into account the effects of on-line fuel reprocessing on burn-up calculations and features a reactivity control algorithm. It is here assessed against a dedicated version of the deterministic ERANOS-based EQL3D procedure (PSI-Switzerland) and adopted to analyze the MSFR fuel salt isotopic evolution. Particular attention is devoted to study the effects of reprocessing time constants and efficiencies on the conversion ratio and the molar concentration of elements relevant for solubility issues (e.g., trivalent actinides and lanthanides). Quantities of interest for fuel handling and safety issues are investigated, including decay heat and activities of hazardous isotopes (neutron and high energy gamma emitters) in the core and in the reprocessing stream. The radiotoxicity generation is also analyzed for the MSFR nominal conditions. The production of helium and the depletion in tungsten content due to nuclear reactions are calculated for the nickel-based alloy selected as reactor structural material of the MSFR. These preliminary evaluations can be helpful in studying the radiation damage of both the primary salt container and the axial reflectors.
International Nuclear Information System (INIS)
Li Hsuennien; Ferng Yuhming; Shih Chunkuan; Hsu Wensheng
2007-01-01
FDS [1] code numerically solves a form of the Navier-Stokes equations appropriate for low-speed, thermally driven flow with an emphasis on smoke and heat transport from fires. FDS uses a mixture fraction combustion model. The mixture fraction is a conserved scalar quantity that is defined as the fraction of fuel gas at a given point in the flow field. The model assumes that combustion is mixing-controlled, and that the reaction of fuel and oxygen is infinitely fast. In FDS, Lagrangian particles are used to simulate smoke movement and sprinkling water-mist discharge. In order to evaluate the combustion model and water-mist suppression function of the code, FDS analyses are conducted to simulate two enclosure fire cases available in the literature. Comparisons with other combustion models are also made. For fires suppression by water-mist in FDS, parametric studies are performed to compare various water-mist injection characteristics for maximum suppression. Numerical results indicate that the flame suppression is closely related to characteristics of the water mist, such as droplet diameter, mist injection velocity, injection density. Our present investigations show that the combustion model and water-mist suppression in FDS can provide simulation results that are comparable with the experiments. (author)
International Nuclear Information System (INIS)
Claiborne, H.C.; Wagner, R.S.; Just, R.A.
1979-12-01
A direct comparison of transient thermal calculations was made with the heat transfer codes HEATING5, THAC-SIP-3D, ADINAT, SINDA, TRUMP, and TRANCO for a hypothetical nuclear waste repository. With the exception of TRUMP and SINDA (actually closer to the earlier CINDA3G version), the other codes agreed to within +-5% for the temperature rises as a function of time. The TRUMP results agreed within +-5% up to about 50 years, where the maximum temperature occurs, and then began an oscillary behavior with up to 25% deviations at longer times. This could have resulted from time steps that were too large or from some unknown system problems. The available version of the SINDA code was not compatible with the IBM compiler without using an alternative method for handling a variable thermal conductivity. The results were about 40% low, but a reasonable agreement was obtained by assuming a uniform thermal conductivity; however, a programming error was later discovered in the alternative method. Some work is required on the IBM version to make it compatible with the system and still use the recommended method of handling variable thermal conductivity. TRANCO can only be run as a 2-D model, and TRUMP and CINDA apparently required longer running times and did not agree in the 2-D case; therefore, only HEATING5, THAC-SIP-3D, and ADINAT were used for the 3-D model calculations. The codes agreed within +-5%; at distances of about 1 ft from the waste canister edge, temperature rises were also close to that predicted by the 3-D model
Peeling Decoding of LDPC Codes with Applications in Compressed Sensing
Directory of Open Access Journals (Sweden)
Weijun Zeng
2016-01-01
Full Text Available We present a new approach for the analysis of iterative peeling decoding recovery algorithms in the context of Low-Density Parity-Check (LDPC codes and compressed sensing. The iterative recovery algorithm is particularly interesting for its low measurement cost and low computational complexity. The asymptotic analysis can track the evolution of the fraction of unrecovered signal elements in each iteration, which is similar to the well-known density evolution analysis in the context of LDPC decoding algorithm. Our analysis shows that there exists a threshold on the density factor; if under this threshold, the recovery algorithm is successful; otherwise it will fail. Simulation results are also provided for verifying the agreement between the proposed asymptotic analysis and recovery algorithm. Compared with existing works of peeling decoding algorithm, focusing on the failure probability of the recovery algorithm, our proposed approach gives accurate evolution of performance with different parameters of measurement matrices and is easy to implement. We also show that the peeling decoding algorithm performs better than other schemes based on LDPC codes.
International Nuclear Information System (INIS)
Paratte, J.M.; Grimm, P.; Hollard, J.M.
1996-02-01
ELCOS is a flexible code system for the stationary simulation of light water reactor cores. It consists of the four computer codes ETOBOX, BOXER, CORCOD and SILWER. The user's manual of the second one is presented here. BOXER calculates the neutronics in cartesian geometry. The code can roughly be divided into four stages: - organisation: choice of the modules, file manipulations, reading and checking of input data, - fine group fluxes and condensation: one-dimensional calculation of fluxes and computation of the group constants of homogeneous materials and cells, - two-dimensional calculations: geometrically detailed simulation of the configuration in few energy groups, - burnup: evolution of the nuclide densities as a function of time. This manual shows all input commands which can be used while running the different modules of BOXER. (author) figs., tabs., refs
Evolution of the DINA-CH tokamak full discharge simulator
International Nuclear Information System (INIS)
Lister, J.B.; Dokouka, V.N.; Khayrutdinov, R.R.; Lukash, V.E.; Duval, B.P.; Moret, J.-M.; Artaud, J.-F.; Baziuk, V.; Cavinato, M.
2005-01-01
This paper summarises the approach taken to develop an open architecture full tokamak discharge simulator - DINA-CH - based on the DINA code and implemented under graphical programming control using Matlab-SIMULINK. The evolution path and present status are presented, with applications to ITER and TCV. The future evolution combining DINA-CH with Cronos, is discussed
Axisym finite element code: modifications for pellet-cladding mechanical interaction analysis
International Nuclear Information System (INIS)
Engelman, G.P.
1978-10-01
Local strain concentrations in nuclear fuel rods are known to be potential sites for failure initiation. Assessment of such strain concentrations requires a two-dimensional analysis of stress and strain in both the fuel and the cladding during pellet-cladding mechanical interaction. To provide such a capability in the FRAP (Fuel Rod Analysis Program) codes, the AXISYM code (a small finite element program developed at the Idaho National Engineering Laboratory) was modified to perform a detailed fuel rod deformation analysis. This report describes the modifications which were made to the AXISYM code to adapt it for fuel rod analysis and presents comparisons made between the two-dimensional AXISYM code and the FRACAS-II code. FRACAS-II is the one-dimensional (generalized plane strain) fuel rod mechanical deformation subcode used in the FRAP codes. Predictions of these two codes should be comparable away from the fuel pellet free ends if the state of deformation at the pellet midplane is near that of generalized plane strain. The excellent agreement obtained in these comparisons checks both the correctness of the AXISYM code modifications as well as the validity of the assumption of generalized plane strain upon which the FRACAS-II subcode is based
On the Organizational Dynamics of the Genetic Code
Zhang, Zhang
2011-06-07
The organization of the canonical genetic code needs to be thoroughly illuminated. Here we reorder the four nucleotides—adenine, thymine, guanine and cytosine—according to their emergence in evolution, and apply the organizational rules to devising an algebraic representation for the canonical genetic code. Under a framework of the devised code, we quantify codon and amino acid usages from a large collection of 917 prokaryotic genome sequences, and associate the usages with its intrinsic structure and classification schemes as well as amino acid physicochemical properties. Our results show that the algebraic representation of the code is structurally equivalent to a content-centric organization of the code and that codon and amino acid usages under different classification schemes were correlated closely with GC content, implying a set of rules governing composition dynamics across a wide variety of prokaryotic genome sequences. These results also indicate that codons and amino acids are not randomly allocated in the code, where the six-fold degenerate codons and their amino acids have important balancing roles for error minimization. Therefore, the content-centric code is of great usefulness in deciphering its hitherto unknown regularities as well as the dynamics of nucleotide, codon, and amino acid compositions.
On the Organizational Dynamics of the Genetic Code
Zhang, Zhang; Yu, Jun
2011-01-01
The organization of the canonical genetic code needs to be thoroughly illuminated. Here we reorder the four nucleotides—adenine, thymine, guanine and cytosine—according to their emergence in evolution, and apply the organizational rules to devising an algebraic representation for the canonical genetic code. Under a framework of the devised code, we quantify codon and amino acid usages from a large collection of 917 prokaryotic genome sequences, and associate the usages with its intrinsic structure and classification schemes as well as amino acid physicochemical properties. Our results show that the algebraic representation of the code is structurally equivalent to a content-centric organization of the code and that codon and amino acid usages under different classification schemes were correlated closely with GC content, implying a set of rules governing composition dynamics across a wide variety of prokaryotic genome sequences. These results also indicate that codons and amino acids are not randomly allocated in the code, where the six-fold degenerate codons and their amino acids have important balancing roles for error minimization. Therefore, the content-centric code is of great usefulness in deciphering its hitherto unknown regularities as well as the dynamics of nucleotide, codon, and amino acid compositions.
Cavitation Modeling in Euler and Navier-Stokes Codes
Deshpande, Manish; Feng, Jinzhang; Merkle, Charles L.
1993-01-01
Many previous researchers have modeled sheet cavitation by means of a constant pressure solution in the cavity region coupled with a velocity potential formulation for the outer flow. The present paper discusses the issues involved in extending these cavitation models to Euler or Navier-Stokes codes. The approach taken is to start from a velocity potential model to ensure our results are compatible with those of previous researchers and available experimental data, and then to implement this model in both Euler and Navier-Stokes codes. The model is then augmented in the Navier-Stokes code by the inclusion of the energy equation which allows the effect of subcooling in the vicinity of the cavity interface to be modeled to take into account the experimentally observed reduction in cavity pressures that occurs in cryogenic fluids such as liquid hydrogen. Although our goal is to assess the practicality of implementing these cavitation models in existing three-dimensional, turbomachinery codes, the emphasis in the present paper will center on two-dimensional computations, most specifically isolated airfoils and cascades. Comparisons between velocity potential, Euler and Navier-Stokes implementations indicate they all produce consistent predictions. Comparisons with experimental results also indicate that the predictions are qualitatively correct and give a reasonable first estimate of sheet cavitation effects in both cryogenic and non-cryogenic fluids. The impact on CPU time and the code modifications required suggests that these models are appropriate for incorporation in current generation turbomachinery codes.
'Transitorion' program for the simulation of the liquid zone evolution against power transients
International Nuclear Information System (INIS)
Coutsiers, Ernesto; Rabiti, Arnaldo; Pomerantz, Marcelo E.; Villar, Javier
2003-01-01
This work presents a program that allows to simulate the liquid zones evolution against power transients at Embalse nuclear power plant reactor. This program takes into account the dynamic effects of plutonium, samarium, xenon and iodine. It simulates also fuel burning, coolant void and the behavior of the reactor regulating system. The validation, based in the comparison with plant's real cases, gives a maximum error of 7% in liquid zone's average in periods of around 5 days. However, the typical adjustment has a lower error, around 2% in liquid zone's average. As the main conclusions of this work the good adjustment of the results of the code as well as the building of an important economic tool for the power plant could be highlighted. (author )
A NEW HYBRID N-BODY-COAGULATION CODE FOR THE FORMATION OF GAS GIANT PLANETS
International Nuclear Information System (INIS)
Bromley, Benjamin C.; Kenyon, Scott J.
2011-01-01
We describe an updated version of our hybrid N-body-coagulation code for planet formation. In addition to the features of our 2006-2008 code, our treatment now includes algorithms for the one-dimensional evolution of the viscous disk, the accretion of small particles in planetary atmospheres, gas accretion onto massive cores, and the response of N-bodies to the gravitational potential of the gaseous disk and the swarm of planetesimals. To validate the N-body portion of the algorithm, we use a battery of tests in planetary dynamics. As a first application of the complete code, we consider the evolution of Pluto-mass planetesimals in a swarm of 0.1-1 cm pebbles. In a typical evolution time of 1-3 Myr, our calculations transform 0.01-0.1 M sun disks of gas and dust into planetary systems containing super-Earths, Saturns, and Jupiters. Low-mass planets form more often than massive planets; disks with smaller α form more massive planets than disks with larger α. For Jupiter-mass planets, masses of solid cores are 10-100 M + .
Data exchange between zero dimensional code and physics platform in the CFETR integrated system code
Energy Technology Data Exchange (ETDEWEB)
Xu, Guoliang [School of Nuclear Science and Technology, University of Science and Technology of China, Hefei 230026 China (China); Shi, Nan [Institute of Plasma Physics, Chinese Academy of Sciences, No. 350 Shushanhu Road, Hefei (China); Zhou, Yifu; Mao, Shifeng [School of Nuclear Science and Technology, University of Science and Technology of China, Hefei 230026 China (China); Jian, Xiang [State Key Laboratory of Advanced Electromagnetic Engineering and Technology, School of Electrical and Electronics Engineering, Huazhong University of Science and Technology, Wuhan 430074 (China); Chen, Jiale [Institute of Plasma Physics, Chinese Academy of Sciences, No. 350 Shushanhu Road, Hefei (China); Liu, Li; Chan, Vincent [School of Nuclear Science and Technology, University of Science and Technology of China, Hefei 230026 China (China); Ye, Minyou, E-mail: yemy@ustc.edu.cn [School of Nuclear Science and Technology, University of Science and Technology of China, Hefei 230026 China (China)
2016-11-01
Highlights: • The workflow of the zero dimensional code and the multi-dimension physics platform of CFETR integrated system codeis introduced. • The iteration process among the codes in the physics platform. • The data transfer between the zero dimensionalcode and the physical platform, including data iteration and validation, and justification for performance parameters.. - Abstract: The China Fusion Engineering Test Reactor (CFETR) integrated system code contains three parts: a zero dimensional code, a physics platform and an engineering platform. We use the zero dimensional code to identify a set of preliminary physics and engineering parameters for CFETR, which is used as input to initiate multi-dimension studies using the physics and engineering platform for design, verification and validation. Effective data exchange between the zero dimensional code and the physical platform is critical for the optimization of CFETR design. For example, in evaluating the impact of impurity radiation on core performance, an open field line code is used to calculate the impurity transport from the first-wall boundary to the pedestal. The impurity particle in the pedestal are used as boundary conditions in a transport code for calculating impurity transport in the core plasma and the impact of core radiation on core performance. Comparison of the results from the multi-dimensional study to those from the zero dimensional code is used to further refine the controlled radiation model. The data transfer between the zero dimensional code and the physical platform, including data iteration and validation, and justification for performance parameters will be presented in this paper.
The CCFM uPDF evolution. uPDFevolv Version 1.0.00
International Nuclear Information System (INIS)
Hautmann, F.; Taheri Monfared, S.
2014-06-01
uPDFevolv is an evolution code for TMD parton densities using the CCFM evolution equation. A description of the underlying theoretical model and technical realization is given together with a detailed program description, with emphasis on parameters the user may want to change.
Fatigue and rupture codified rules comparison
International Nuclear Information System (INIS)
Faidy, C.
2004-01-01
The European Directive on Pressure Equipment requests risk studies and in particular to assure no risk of fatigue and rupture in operation. The answers to these questions are different in the different existing design codes (EN Standards, ASME III and VIII or RCC-M or CODAP-CODETI codes) and corresponding in operation codes (ASME or RSE-M). Design safety factors, material properties, fabrication, refinement in the analysis methods, monitoring in operation, hydro-proof test level... Around these Codes, different rules are under development. A16 in France, R6 in UK or FITNET at the EC level. This paper is concerned by a comparison between 2 different Codes to analyze the risk of fatigue or rupture of pressure equipments and mainly a comparison between RCC-M Code and EN 13445 standard for pressure vessel. Recommendations for future work will be proposed. (authors)
International Nuclear Information System (INIS)
Mohr, C.L.; Rausch, W.N.; Hesson, G.M.
1981-07-01
The LOCA Simulation Program in the NRU reactor is the first set of experiments to provide data on the behavior of full-length, nuclear-heated PWR fuel bundles during the heatup, reflood, and quench phases of a loss-of-coolant accident (LOCA). This paper compares the temperature time histories of 4 experimental test cases with 4 computer codes: CE-THERM, FRAP-T5, GT3-FLECHT, and TRUMP-FLECHT. The preliminary comparisons between prediction and experiment show that the state-of-the art fuel codes have large uncertainties and are not necessarily conservative in predicting peak temperatures, turn around times, and bundle quench times
Towards a heavy-ion transport capability in the MARS15 Code
International Nuclear Information System (INIS)
Mokhov, N.V.; Gudima, K.K.; Mashnik, S.G.; Rakhno, I.L.; Striganov, S.
2004-01-01
In order to meet the challenges of new accelerator and space projects and further improve modelling of radiation effects in microscopic objects, heavy-ion interaction and transport physics have been recently incorporated into the MARS15 Monte Carlo code. A brief description of new modules is given in comparison with experimental data. The MARS Monte Carlo code is widely used in numerous accelerator, detector, shielding and cosmic ray applications. The needs of the Relativistic Heavy-Ion Collider, Large Hadron Collider, Rare Isotope Accelerator and NASA projects have recently induced adding heavy-ion interaction and transport physics to the MARS15 code. The key modules of the new implementation are described below along with their comparisons to experimental data.
A Comparison of the Radio and Optical Time-Evolution of HH 1 and 2
Rodríguez, L. F.; Raga, A. C.; Rodríguez-Kamenetzky, A.; Carrasco-González, C.
2018-04-01
We present a comparison between the time-evolution over the past ≍20 years of the radio continuum and Hα emission of HH 1 and 2. We find that the radio continuum and the Hα emission of both objects show very similar trends, with HH 1 becoming fainter and HH 2 brightening quite considerably (by about a factor of 2). We also find that the FHα /Fff (Hα to freefree continuum) ratio of HH 1 and 2 has higher values than the ones typically found in planetary nebulae (PNe), which we interpret as an indication that the Hα and free-free emission of HH 1/2 is produced in emitting regions with lower temperatures (≍2000 K) than the emission of PNe (with ≍104 K).
Model comparisons of the reactive burn model SURF in three ASC codes
Energy Technology Data Exchange (ETDEWEB)
Whitley, Von Howard [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Stalsberg, Krista Lynn [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Reichelt, Benjamin Lee [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Shipley, Sarah Jayne [Los Alamos National Lab. (LANL), Los Alamos, NM (United States)
2018-01-12
A study of the SURF reactive burn model was performed in FLAG, PAGOSA and XRAGE. In this study, three different shock-to-detonation transition experiments were modeled in each code. All three codes produced similar model results for all the experiments modeled and at all resolutions. Buildup-to-detonation time, particle velocities and resolution dependence of the models was notably similar between the codes. Given the current PBX 9502 equations of state and SURF calibrations, each code is equally capable of predicting the correct detonation time and distance when impacted by a 1D impactor at pressures ranging from 10-16 GPa, as long as the resolution of the mesh is not too coarse.
Contamination of RR Lyrae stars from Binary Evolution Pulsators
Karczmarek, Paulina; Pietrzyński, Grzegorz; Belczyński, Krzysztof; Stępień, Kazimierz; Wiktorowicz, Grzegorz; Iłkiewicz, Krystian
2016-06-01
Binary Evolution Pulsator (BEP) is an extremely low-mass member of a binary system, which pulsates as a result of a former mass transfer to its companion. BEP mimics RR Lyrae-type pulsations but has different internal structure and evolution history. We present possible evolution channels to produce BEPs, and evaluate the contamination value, i.e. how many objects classified as RR Lyrae stars can be undetected BEPs. In this analysis we use population synthesis code StarTrack.
Adaptive Evolution of CENP-A in Percid Fishes
Directory of Open Access Journals (Sweden)
Harriet N. A. Abbey
2015-07-01
Full Text Available Centromeric protein A (CENP-A is the epigenetic determinant of centromeres. This protein has been shown to be adaptively evolving in a number of animal and plant species. In a previous communication we were able to demonstrate that signs of adaptive evolution were detected in the comparison of CENP-A sequences from three percid fish species. In this study we isolated the CENP-A gene from eight additional species from the Percidae family. With these sequences and those previously obtained, we carried out a more robust statistical analysis of codon specific positive selection in CENP-A coding sequences of eleven percid species. We were able to demonstrate that at least two amino acid positions within the N-terminal tail are under strong positive selection and that one of these positions is potentially a substrate for phosphorylation. While nonsynonymous substitutions were detected in the histone fold domain, these were not statistically supported as resulting from positive selection.
Boron concentration evolution in the temporary curtains of a BWR reactor. Burcur code
International Nuclear Information System (INIS)
Cano Aguado, M.; Perlado Martin, J.M.; Minguez Torres, E.
1977-01-01
The theoretical model and the user's guide of the code Burcur is included. This code analyzes the burnable poison concentration of the temporary curtains as a function of time, for BWR reactors of the 7 x 7 design. The computing time being reasonably short, the number of burnup steps is as high as necessary.(author) [es
The origins and evolutionary history of human non-coding RNA regulatory networks.
Sherafatian, Masih; Mowla, Seyed Javad
2017-04-01
The evolutionary history and origin of the regulatory function of animal non-coding RNAs are not well understood. Lack of conservation of long non-coding RNAs and small sizes of microRNAs has been major obstacles in their phylogenetic analysis. In this study, we tried to shed more light on the evolution of ncRNA regulatory networks by changing our phylogenetic strategy to focus on the evolutionary pattern of their protein coding targets. We used available target databases of miRNAs and lncRNAs to find their protein coding targets in human. We were able to recognize evolutionary hallmarks of ncRNA targets by phylostratigraphic analysis. We found the conventional 3'-UTR and lesser known 5'-UTR targets of miRNAs to be enriched at three consecutive phylostrata. Firstly, in eukaryata phylostratum corresponding to the emergence of miRNAs, our study revealed that miRNA targets function primarily in cell cycle processes. Moreover, the same overrepresentation of the targets observed in the next two consecutive phylostrata, opisthokonta and eumetazoa, corresponded to the expansion periods of miRNAs in animals evolution. Coding sequence targets of miRNAs showed a delayed rise at opisthokonta phylostratum, compared to the 3' and 5' UTR targets of miRNAs. LncRNA regulatory network was the latest to evolve at eumetazoa.
THE FORMATION OF A MILKY WAY-SIZED DISK GALAXY. I. A COMPARISON OF NUMERICAL METHODS
Energy Technology Data Exchange (ETDEWEB)
Zhu, Qirong; Li, Yuexing, E-mail: qxz125@psu.edu [Department of Astronomy and Astrophysics, The Pennsylvania State University, 525 Davey Lab, University Park, PA 16802 (United States)
2016-11-01
The long-standing challenge of creating a Milky Way- (MW-) like disk galaxy from cosmological simulations has motivated significant developments in both numerical methods and physical models. We investigate these two fundamental aspects in a new comparison project using a set of cosmological hydrodynamic simulations of an MW-sized galaxy. In this study, we focus on the comparison of two particle-based hydrodynamics methods: an improved smoothed particle hydrodynamics (SPH) code Gadget, and a Lagrangian Meshless Finite-Mass (MFM) code Gizmo. All the simulations in this paper use the same initial conditions and physical models, which include star formation, “energy-driven” outflows, metal-dependent cooling, stellar evolution, and metal enrichment. We find that both numerical schemes produce a late-type galaxy with extended gaseous and stellar disks. However, notable differences are present in a wide range of galaxy properties and their evolution, including star-formation history, gas content, disk structure, and kinematics. Compared to Gizmo, the Gadget simulation produced a larger fraction of cold, dense gas at high redshift which fuels rapid star formation and results in a higher stellar mass by 20% and a lower gas fraction by 10% at z = 0, and the resulting gas disk is smoother and more coherent in rotation due to damping of turbulent motion by the numerical viscosity in SPH, in contrast to the Gizmo simulation, which shows a more prominent spiral structure. Given its better convergence properties and lower computational cost, we argue that the MFM method is a promising alternative to SPH in cosmological hydrodynamic simulations.
Applications of the Los Alamos High Energy Transport code
International Nuclear Information System (INIS)
Waters, L.; Gavron, A.; Prael, R.E.
1992-01-01
Simulation codes reliable through a large range of energies are essential to analyze the environment of vehicles and habitats proposed for space exploration. The LAHET monte carlo code has recently been expanded to track high energy hadrons with FLUKA, while retaining the original Los Alamos version of HETC at lower energies. Electrons and photons are transported with EGS4, and an interface to the MCNP monte carlo code is provided to analyze neutrons with kinetic energies less than 20 MeV. These codes are benchmarked by comparison of LAHET/MCNP calculations to data from the Brookhaven experiment E814 participant calorimeter
Software architecture evolution
DEFF Research Database (Denmark)
Barais, Olivier; Le Meur, Anne-Francoise; Duchien, Laurence
2008-01-01
Software architectures must frequently evolve to cope with changing requirements, and this evolution often implies integrating new concerns. Unfortunately, when the new concerns are crosscutting, existing architecture description languages provide little or no support for this kind of evolution....... The software architect must modify multiple elements of the architecture manually, which risks introducing inconsistencies. This chapter provides an overview, comparison and detailed treatment of the various state-of-the-art approaches to describing and evolving software architectures. Furthermore, we discuss...... one particular framework named Tran SAT, which addresses the above problems of software architecture evolution. Tran SAT provides a new element in the software architecture descriptions language, called an architectural aspect, for describing new concerns and their integration into an existing...
Directory of Open Access Journals (Sweden)
Henrique F Carvalho
Full Text Available Metalloproteases have evolved in a vast number of biological systems, being one of the most diverse types of proteases and presenting a wide range of folds and catalytic metal ions. Given the increasing understanding of protein internal dynamics and its role in enzyme function, we are interested in assessing how the structural heterogeneity of metalloproteases translates into their dynamics. Therefore, the dynamical profile of the clan MA type protein thermolysin, derived from an Elastic Network Model of protein structure, was evaluated against those obtained from a set of experimental structures and molecular dynamics simulation trajectories. A close correspondence was obtained between modes derived from the coarse-grained model and the subspace of functionally-relevant motions observed experimentally, the later being shown to be encoded in the internal dynamics of the protein. This prompted the use of dynamics-based comparison methods that employ such coarse-grained models in a representative set of clan members, allowing for its quantitative description in terms of structural and dynamical variability. Although members show structural similarity, they nonetheless present distinct dynamical profiles, with no apparent correlation between structural and dynamical relatedness. However, previously unnoticed dynamical similarity was found between the relevant members Carboxypeptidase Pfu, Leishmanolysin, and Botulinum Neurotoxin Type A, despite sharing no structural similarity. Inspection of the respective alignments shows that dynamical similarity has a functional basis, namely the need for maintaining proper intermolecular interactions with the respective substrates. These results suggest that distinct selective pressure mechanisms act on metalloproteases at structural and dynamical levels through the course of their evolution. This work shows how new insights on metalloprotease function and evolution can be assessed with comparison schemes that
Comparing TCV experimental VDE responses with DINA code simulations
Favez, J.-Y.; Khayrutdinov, R. R.; Lister, J. B.; Lukash, V. E.
2002-02-01
The DINA free-boundary equilibrium simulation code has been implemented for TCV, including the full TCV feedback and diagnostic systems. First results showed good agreement with control coil perturbations and correctly reproduced certain non-linear features in the experimental measurements. The latest DINA code simulations, presented in this paper, exploit discharges with different cross-sectional shapes and different vertical instability growth rates which were subjected to controlled vertical displacement events (VDEs), extending previous work with the DINA code on the DIII-D tokamak. The height of the TCV vessel allows observation of the non-linear evolution of the VDE growth rate as regions of different vertical field decay index are crossed. The vertical movement of the plasma is found to be well modelled. For most experiments, DINA reproduces the S-shape of the vertical displacement in TCV with excellent precision. This behaviour cannot be modelled using linear time-independent models because of the predominant exponential shape due to the unstable pole of any linear time-independent model. The other most common equilibrium parameters like the plasma current Ip, the elongation κ, the triangularity δ, the safety factor q, the ratio between the averaged plasma kinetic pressure and the pressure of the poloidal magnetic field at the edge of the plasma βp, and the internal self inductance li also show acceptable agreement. The evolution of the growth rate γ is estimated and compared with the evolution of the closed-loop growth rate calculated with the RZIP linear model, confirming the origin of the observed behaviour.
Comparing TCV experimental VDE responses with DINA code simulations
International Nuclear Information System (INIS)
Favez, J.Y.; Khayrutdinov, J.B.; Lister, J.B.; Lukash, V.E.
2001-10-01
The DINA free-boundary equilibrium simulation code has been implemented for TCV, including the full TCV feedback and diagnostic systems. First results showed good agreement with control coil perturbations and correctly reproduced certain non-linear features in the experimental measurements. The latest DINA code simulations, presented in this paper, exploit discharges with different cross- sectional shapes and different vertical instability growth rates which were subjected to controlled Vertical Displacement Events, extending previous work with the DINA code on the DIII-D tokamak. The height of the TCV vessel allows observation of the non- linear evolution of the VDE growth rate as regions of different vertical field decay index are crossed. The vertical movement of the plasma is found to be well modelled. For most experiments, DINA reproduces the S-shape of the vertical displacement in TCV with excellent precision. This behaviour cannot be modelled using linear time-independent models because of the predominant exponential shape due to the unstable pole of any linear time-independent model. The other most common equilibrium parameters like the plasma current Ip, the elongation K, the triangularity d, the safety factor q, the ratio between the averaged plasma kinetic pressure and the pressure of the poloidal magnetic field at the edge of the plasma bp and the internal self inductance l also show acceptable agreement. The evolution of the growth rate g is estimated and compared with the evolution of the closed loop growth rate calculated with the RZIP linear model, confirming the origin of the observed behaviour. (author)
Subramaniam, Saravanan; Mohapatra, Jajati K; Das, Biswajit; Sharma, Gaurav K; Biswal, Jitendra K; Mahajan, Sonalika; Misri, Jyoti; Dash, Bana B; Pattnaik, Bramhadev
2015-07-01
Foot-and-mouth disease virus (FMDV) serotype Asia1 was first reported in India in 1951, where three major genetic lineages (B, C and D) of this serotype have been described until now. In this study, the capsid protein coding region of serotype Asia1 viruses (n = 99) from India were analyzed, giving importance to the viruses circulating since 2007. All of the isolates (n = 50) recovered during 2007-2013 were found to group within the re-emerging cluster of lineage C (designated as sublineage C(R)). The evolutionary rate of sublineage C(R) was estimated to be slightly higher than that of the serotype as a whole, and the time of the most recent common ancestor for this cluster was estimated to be approximately 2001. In comparison to the older isolates of lineage C (1993-2001), the re-emerging viruses showed variation at eight amino acid positions, including substitutions at the antigenically critical residues VP279 and VP2131. However, no direct correlation was found between sequence variations and antigenic relationships. The number of codons under positive selection and the nature of the selection pressure varied widely among the structural proteins, implying a heterogeneous pattern of evolution in serotype Asia1. While episodic diversifying selection appears to play a major role in shaping the evolution of VP1 and VP3, selection pressure acting on codons of VP2 is largely pervasive. Further, episodic positive selection appears to be responsible for the early diversification of lineage C. Recombination events identified in the structural protein coding region indicates its probable role in adaptive evolution of serotype Asia1 viruses.
International Nuclear Information System (INIS)
Ochoa Valero, R.; Garcia-Herranz, N.; Aragones, J. M.
2010-01-01
The aim of this study is to evaluate the minority actinides transmutation in sodium fast reactors (SFR) assuming a uniform load pattern. It is determined the isotopic evolution of the actinides along burn, and the evolution of the reactivity and the reactivity coefficients. For that, it is used the MCNPX neutron transport code coupled with the inventory code CINDER90.
Toward a CFD nose-to-tail capability - Hypersonic unsteady Navier-Stokes code validation
Edwards, Thomas A.; Flores, Jolen
1989-01-01
Computational fluid dynamics (CFD) research for hypersonic flows presents new problems in code validation because of the added complexity of the physical models. This paper surveys code validation procedures applicable to hypersonic flow models that include real gas effects. The current status of hypersonic CFD flow analysis is assessed with the Compressible Navier-Stokes (CNS) code as a case study. The methods of code validation discussed to beyond comparison with experimental data to include comparisons with other codes and formulations, component analyses, and estimation of numerical errors. Current results indicate that predicting hypersonic flows of perfect gases and equilibrium air are well in hand. Pressure, shock location, and integrated quantities are relatively easy to predict accurately, while surface quantities such as heat transfer are more sensitive to the solution procedure. Modeling transition to turbulence needs refinement, though preliminary results are promising.
International Nuclear Information System (INIS)
1986-02-01
The paper reviews the progress on the development of a computer model TIME2, for modelling the long term evolution of shallow burial site environments for low- and intermediate-level radioactive waste disposal. The subject is discussed under the five topic headings: 1) background studies, including geomorphology, climate, human-induced effects, and seismicity, 2) development of the TIME2 code, 3) verification and testing, 4) documentation, and, 5) role of TIME2 in radiological risk assessment. (U.K.)
Architecture-Centric Evolution : New Issues and Trends. Report on the Workshop ACE at ECOOP’06
Avgeriou, Paris; Zdun, Uwe; Borne, Isabelle
2006-01-01
Software evolution has largely been focused on low-level implementation artefacts through refactoring techniques rather than the architectural level. However code-centric evolution techniques have not managed to effectively solve the problems that software evolution entails. Instead a paradigm shift
Xe-135 and Sm-149 Isotopic Evolution Analysis Xesamo code
International Nuclear Information System (INIS)
Caro, R.; Gallego, J.; Martinez Fanegas, R.
1977-01-01
In this report the time evolution analysis of the nuclides concentration Xe-135 and Sm-149 as a function of the neutron flux is carried out. The neutron flux may be any function of time. It is analyzed as well the reactivity changes associated with the xenon and samarium concentration variations. (Author) 5 refs
Energy Technology Data Exchange (ETDEWEB)
Paratte, J.M.; Grimm, P.; Hollard, J.M. [Paul Scherrer Inst. (PSI), Villigen (Switzerland)
1996-02-01
ELCOS is a flexible code system for the stationary simulation of light water reactor cores. It consists of the four computer codes ETOBOX, BOXER, CORCOD and SILWER. The user`s manual of the second one is presented here. BOXER calculates the neutronics in cartesian geometry. The code can roughly be divided into four stages: - organisation: choice of the modules, file manipulations, reading and checking of input data, - fine group fluxes and condensation: one-dimensional calculation of fluxes and computation of the group constants of homogeneous materials and cells, - two-dimensional calculations: geometrically detailed simulation of the configuration in few energy groups, - burnup: evolution of the nuclide densities as a function of time. This manual shows all input commands which can be used while running the different modules of BOXER. (author) figs., tabs., refs.
Directory of Open Access Journals (Sweden)
Colm Carraher
Full Text Available In insects, odorant receptors detect volatile cues involved in behaviours such as mate recognition, food location and oviposition. We have investigated the evolution of three odorant receptors from five species within the moth genera Ctenopseustis and Planotrotrix, family Tortricidae, which fall into distinct clades within the odorant receptor multigene family. One receptor is the orthologue of the co-receptor Or83b, now known as Orco (OR2, and encodes the obligate ion channel subunit of the receptor complex. In comparison, the other two receptors, OR1 and OR3, are ligand-binding receptor subunits, activated by volatile compounds produced by plants--methyl salicylate and citral, respectively. Rates of sequence evolution at non-synonymous sites were significantly higher in OR1 compared with OR2 and OR3. Within the dataset OR1 contains 109 variable amino acid positions that are distributed evenly across the entire protein including transmembrane helices, loop regions and termini, while OR2 and OR3 contain 18 and 16 variable sites, respectively. OR2 shows a high level of amino acid conservation as expected due to its essential role in odour detection; however we found unexpected differences in the rate of evolution between two ligand-binding odorant receptors, OR1 and OR3. OR3 shows high sequence conservation suggestive of a conserved role in odour reception, whereas the higher rate of evolution observed in OR1, particularly at non-synonymous sites, may be suggestive of relaxed constraint, perhaps associated with the loss of an ancestral role in sex pheromone reception.
Springate, David A; Kontopantelis, Evangelos; Ashcroft, Darren M; Olier, Ivan; Parisi, Rosa; Chamapiwa, Edmore; Reeves, David
2014-01-01
Lists of clinical codes are the foundation for research undertaken using electronic medical records (EMRs). If clinical code lists are not available, reviewers are unable to determine the validity of research, full study replication is impossible, researchers are unable to make effective comparisons between studies, and the construction of new code lists is subject to much duplication of effort. Despite this, the publication of clinical codes is rarely if ever a requirement for obtaining grants, validating protocols, or publishing research. In a representative sample of 450 EMR primary research articles indexed on PubMed, we found that only 19 (5.1%) were accompanied by a full set of published clinical codes and 32 (8.6%) stated that code lists were available on request. To help address these problems, we have built an online repository where researchers using EMRs can upload and download lists of clinical codes. The repository will enable clinical researchers to better validate EMR studies, build on previous code lists and compare disease definitions across studies. It will also assist health informaticians in replicating database studies, tracking changes in disease definitions or clinical coding practice through time and sharing clinical code information across platforms and data sources as research objects.
Development of multi-physics code systems based on the reactor dynamics code DYN3D
Energy Technology Data Exchange (ETDEWEB)
Kliem, Soeren; Gommlich, Andre; Grahn, Alexander; Rohde, Ulrich [Helmholtz-Zentrum Dresden-Rossendorf e.V., Dresden (Germany); Schuetze, Jochen [ANSYS Germany GmbH, Darmstadt (Germany); Frank, Thomas [ANSYS Germany GmbH, Otterfing (Germany); Gomez Torres, Armando M.; Sanchez Espinoza, Victor Hugo [Karlsruher Institut fuer Technologie (KIT), Eggenstein-Leopoldshafen (Germany)
2011-07-15
The reactor dynamics code DYN3D has been coupled with the CFD code ANSYS CFX and the 3D thermal hydraulic core model FLICA4. In the coupling with ANSYS CFX, DYN3D calculates the neutron kinetics and the fuel behavior including the heat transfer to the coolant. The physical data interface between the codes is the volumetric heat release rate into the coolant. In the coupling with FLICA4 only the neutron kinetics module of DYN3D is used. Fluid dynamics and related transport phenomena in the reactor's coolant and fuel behavior is calculated by FLICA4. The correctness of the coupling of DYN3D with both thermal hydraulic codes was verified by the calculation of different test problems. These test problems were set-up in such a way that comparison with the DYN3D stand-alone code was possible. This included steady-state and transient calculations of a mini-core consisting of nine real-size PWR fuel assemblies with ANSYS CFX/DYN3D as well as mini-core and a full core steady-state calculation using FLICA4/DYN3D. (orig.)
Development of multi-physics code systems based on the reactor dynamics code DYN3D
International Nuclear Information System (INIS)
Kliem, Soeren; Gommlich, Andre; Grahn, Alexander; Rohde, Ulrich; Schuetze, Jochen; Frank, Thomas; Gomez Torres, Armando M.; Sanchez Espinoza, Victor Hugo
2011-01-01
The reactor dynamics code DYN3D has been coupled with the CFD code ANSYS CFX and the 3D thermal hydraulic core model FLICA4. In the coupling with ANSYS CFX, DYN3D calculates the neutron kinetics and the fuel behavior including the heat transfer to the coolant. The physical data interface between the codes is the volumetric heat release rate into the coolant. In the coupling with FLICA4 only the neutron kinetics module of DYN3D is used. Fluid dynamics and related transport phenomena in the reactor's coolant and fuel behavior is calculated by FLICA4. The correctness of the coupling of DYN3D with both thermal hydraulic codes was verified by the calculation of different test problems. These test problems were set-up in such a way that comparison with the DYN3D stand-alone code was possible. This included steady-state and transient calculations of a mini-core consisting of nine real-size PWR fuel assemblies with ANSYS CFX/DYN3D as well as mini-core and a full core steady-state calculation using FLICA4/DYN3D. (orig.)
10Gbps 2D MGC OCDMA Code over FSO Communication System
Professor Urmila Bhanja, Associate, Dr.; Khuntia, Arpita; Alamasety Swati, (Student
2017-08-01
Currently, wide bandwidth signal dissemination along with low latency is a leading requisite in various applications. Free space optical wireless communication has introduced as a realistic technology for bridging the gap in present high data transmission fiber connectivity and as a provisional backbone for rapidly deployable wireless communication infrastructure. The manuscript highlights on the implementation of 10Gbps SAC-OCDMA FSO communications using modified two dimensional Golomb code (2D MGC) that possesses better auto correlation, minimum cross correlation and high cardinality. A comparison based on pseudo orthogonal (PSO) matrix code and modified two dimensional Golomb code (2D MGC) is developed in the proposed SAC OCDMA-FSO communication module taking different parameters into account. The simulative outcome signifies that the communication radius is bounded by the multiple access interference (MAI). In this work, a comparison is made in terms of bit error rate (BER), and quality factor (Q) based on modified two dimensional Golomb code (2D MGC) and PSO matrix code. It is observed that the 2D MGC yields better results compared to the PSO matrix code. The simulation results are validated using optisystem version 14.
Rapid installation of numerical models in multiple parent codes
Energy Technology Data Exchange (ETDEWEB)
Brannon, R.M.; Wong, M.K.
1996-10-01
A set of``model interface guidelines``, called MIG, is offered as a means to more rapidly install numerical models (such as stress-strain laws) into any parent code (hydrocode, finite element code, etc.) without having to modify the model subroutines. The model developer (who creates the model package in compliance with the guidelines) specifies the model`s input and storage requirements in a standardized way. For portability, database management (such as saving user inputs and field variables) is handled by the parent code. To date, NUG has proved viable in beta installations of several diverse models in vectorized and parallel codes written in different computer languages. A NUG-compliant model can be installed in different codes without modifying the model`s subroutines. By maintaining one model for many codes, MIG facilitates code-to-code comparisons and reduces duplication of effort potentially reducing the cost of installing and sharing models.
Method for quantitative assessment of nuclear safety computer codes
International Nuclear Information System (INIS)
Dearien, J.A.; Davis, C.B.; Matthews, L.J.
1979-01-01
A procedure has been developed for the quantitative assessment of nuclear safety computer codes and tested by comparison of RELAP4/MOD6 predictions with results from two Semiscale tests. This paper describes the developed procedure, the application of the procedure to the Semiscale tests, and the results obtained from the comparison
Accuracy assessment of a new Monte Carlo based burnup computer code
International Nuclear Information System (INIS)
El Bakkari, B.; ElBardouni, T.; Nacir, B.; ElYounoussi, C.; Boulaich, Y.; Meroun, O.; Zoubair, M.; Chakir, E.
2012-01-01
Highlights: ► A new burnup code called BUCAL1 was developed. ► BUCAL1 uses the MCNP tallies directly in the calculation of the isotopic inventories. ► Validation of BUCAL1 was done by code to code comparison using VVER-1000 LEU Benchmark Assembly. ► Differences from BM value were found to be ± 600 pcm for k ∞ and ±6% for the isotopic compositions. ► The effect on reactivity due to the burnup of Gd isotopes is well reproduced by BUCAL1. - Abstract: This study aims to test for the suitability and accuracy of a new home-made Monte Carlo burnup code, called BUCAL1, by investigating and predicting the neutronic behavior of a “VVER-1000 LEU Assembly Computational Benchmark”, at lattice level. BUCAL1 uses MCNP tally information directly in the computation; this approach allows performing straightforward and accurate calculation without having to use the calculated group fluxes to perform transmutation analysis in a separate code. ENDF/B-VII evaluated nuclear data library was used in these calculations. Processing of the data library is performed using recent updates of NJOY99 system. Code to code comparisons with the reported Nuclear OECD/NEA results are presented and analyzed.
Analysis of ATLAS FLB-EC6 Experiment using SPACE Code
International Nuclear Information System (INIS)
Lee, Donghyuk; Kim, Yohan; Kim, Seyun
2013-01-01
The new code is named SPACE(Safety and Performance Analysis Code for Nuclear Power Plant). As a part of code validation effort, simulation of ATLAS FLB(Feedwater Line Break) experiment using SPACE code has been performed. The FLB-EC6 experiment is economizer break of a main feedwater line. The calculated results using the SPACE code are compared with those from the experiment. The ATLAS FLB-EC6 experiment, which is economizer feedwater line break, was simulated using the SPACE code. The calculated results were compared with those from the experiment. The comparisons of break flow rate and steam generator water level show good agreement with the experiment. The SPACE code is capable of predicting physical phenomena occurring during ATLAS FLB-EC6 experiment
Gamma streaming experiments for validation of Monte Carlo code
International Nuclear Information System (INIS)
Thilagam, L.; Mohapatra, D.K.; Subbaiah, K.V.; Iliyas Lone, M.; Balasubramaniyan, V.
2012-01-01
In-homogeneities in shield structures lead to considerable amount of leakage radiation (streaming) increasing the radiation levels in accessible areas. Development works on experimental as well as computational methods for quantifying this streaming radiation are still continuing. Monte Carlo based radiation transport code, MCNP is usually a tool for modeling and analyzing such problems involving complex geometries. In order to validate this computational method for streaming analysis, it is necessary to carry out some experimental measurements simulating these inhomogeneities like ducts and voids present in the bulk shields for typical cases. The data thus generated will be analysed by simulating the experimental set up employing MCNP code and optimized input parameters for the code in finding solutions for similar radiation streaming problems will be formulated. Comparison of experimental data obtained from radiation streaming experiments through ducts will give a set of thumb rules and analytical fits for total radiation dose rates within and outside the duct. The present study highlights the validation of MCNP code through the gamma streaming experiments carried out with the ducts of various shapes and dimensions. Over all, the present study throws light on suitability of MCNP code for the analysis of gamma radiation streaming problems for all duct configurations considered. In the present study, only dose rate comparisons have been made. Studies on spectral comparison of streaming radiation are in process. Also, it is planned to repeat the experiments with various shield materials. Since the penetrations and ducts through bulk shields are unavoidable in an operating nuclear facility the results on this kind of radiation streaming simulations and experiments will be very useful in the shield structure optimization without compromising the radiation safety
Neutron-induced damage evolution under Beam Raster Scanner conditions for IFMIF
International Nuclear Information System (INIS)
Mota, Fernando; Ortiz, Christophe J.; Ibarra, Angel; Vila, Rafael
2011-01-01
The formation and evolution of defects in materials irradiated with a homogeneous neutron source and with the Beam Raster Scanner (BRS) solution was investigated. The intensity neutron source fluctuations inherent to the BRS system were determined using the neutron transport McDeLicious code. Defects generated during irradiation were calculated using the binary collision approximation MARLOWE code, using the primary knock-on atom (PKA) energy spectrum resulting from neutron interactions with the material. In order to predict the evolution of defects during irradiation, a Rate Theory model based on ab initio parameters was developed. Our model accounts for the migration of mobile defects, the formation of clusters and their recombination. As an example, we investigated defect evolution in Fe irradiated at room temperature in both beam configurations. Simulation results clearly indicate that the defect evolution expected in the BRS configuration is nearly the same as the one expected in a homogeneous irradiation system.
International Nuclear Information System (INIS)
1989-11-01
The present report deals with the comparison of 6 blind predictions, submitted by 5 participants, and the experimental results measured during the test PO-SB-7 performed in PIPER-ONE facility. The PIPER-ONE apparatus is an experimental simulator of a General Electric BWR. The test PO-SB-7 simulates a SB-LOCA originated by a break in one recirculation line of the reference BWR-6 plant, without intervention of high pressure ECCS. The overall activity constitutes the CSNI ISP-21. The main parts of the report are: a) outline of the test facility and of the PO-SB-7 experiment; b) overview of input models used by participants; c) evaluation of participant predictions on the basis of one-by-one comparison with selected experimental trends; d) evaluation of present code capabilities and accuracy, on the basis of the overall comparison between measured data and participants double blind predictions. Finally, a judgement is given in relation to the overall value of the activity
MELCOR Accident Consequence Code System (MACCS)
International Nuclear Information System (INIS)
Rollstin, J.A.; Chanin, D.I.; Jow, H.N.
1990-02-01
This report describes the MACCS computer code. The purpose of this code is to simulate the impact of severe accidents at nuclear power plants on the surrounding environment. MACCS has been developed for the US Nuclear Regulatory Commission to replace the previously used CRAC2 code, and it incorporates many improvements in modeling flexibility in comparison to CRAC2. The principal phenomena considered in MACCS are atmospheric transport, mitigative actions based on dose projections, dose accumulation by a number of pathways including food and water ingestion, early and latent health effects, and economic costs. The MACCS code can be used for a variety of applications. These include (1) probabilistic risk assessment (PRA) of nuclear power plants and other nuclear facilities, (2) sensitivity studies to gain a better understanding of the parameters important to PRA, and (3) cost-benefit analysis. This report is composed of three volumes. Volume I, the User's Guide, describes the input data requirements of the MACCS code and provides directions for its use as illustrated by three sample problems. Volume II, the Model Description, describes the underlying models that are implemented in the code, and Volume III, the Programmer's Reference Manual, describes the code's structure and database management
MELCOR Accident Consequence Code System (MACCS)
Energy Technology Data Exchange (ETDEWEB)
Jow, H.N.; Sprung, J.L.; Ritchie, L.T. (Sandia National Labs., Albuquerque, NM (USA)); Rollstin, J.A. (GRAM, Inc., Albuquerque, NM (USA)); Chanin, D.I. (Technadyne Engineering Consultants, Inc., Albuquerque, NM (USA))
1990-02-01
This report describes the MACCS computer code. The purpose of this code is to simulate the impact of severe accidents at nuclear power plants on the surrounding environment. MACCS has been developed for the US Nuclear Regulatory Commission to replace the previously used CRAC2 code, and it incorporates many improvements in modeling flexibility in comparison to CRAC2. The principal phenomena considered in MACCS are atmospheric transport, mitigative actions based on dose projection, dose accumulation by a number of pathways including food and water ingestion, early and latent health effects, and economic costs. The MACCS code can be used for a variety of applications. These include (1) probabilistic risk assessment (PRA) of nuclear power plants and other nuclear facilities, (2) sensitivity studies to gain a better understanding of the parameters important to PRA, and (3) cost-benefit analysis. This report is composed of three volumes. Volume I, the User's Guide, describes the input data requirements of the MACCS code and provides directions for its use as illustrated by three sample problems. Volume II, the Model Description, describes the underlying models that are implemented in the code, and Volume III, the Programmer's Reference Manual, describes the code's structure and database management. 59 refs., 14 figs., 15 tabs.
MELCOR Accident Consequence Code System (MACCS)
International Nuclear Information System (INIS)
Jow, H.N.; Sprung, J.L.; Ritchie, L.T.; Rollstin, J.A.; Chanin, D.I.
1990-02-01
This report describes the MACCS computer code. The purpose of this code is to simulate the impact of severe accidents at nuclear power plants on the surrounding environment. MACCS has been developed for the US Nuclear Regulatory Commission to replace the previously used CRAC2 code, and it incorporates many improvements in modeling flexibility in comparison to CRAC2. The principal phenomena considered in MACCS are atmospheric transport, mitigative actions based on dose projection, dose accumulation by a number of pathways including food and water ingestion, early and latent health effects, and economic costs. The MACCS code can be used for a variety of applications. These include (1) probabilistic risk assessment (PRA) of nuclear power plants and other nuclear facilities, (2) sensitivity studies to gain a better understanding of the parameters important to PRA, and (3) cost-benefit analysis. This report is composed of three volumes. Volume I, the User's Guide, describes the input data requirements of the MACCS code and provides directions for its use as illustrated by three sample problems. Volume II, the Model Description, describes the underlying models that are implemented in the code, and Volume III, the Programmer's Reference Manual, describes the code's structure and database management. 59 refs., 14 figs., 15 tabs
MELCOR Accident Consequence Code System (MACCS)
International Nuclear Information System (INIS)
Chanin, D.I.; Sprung, J.L.; Ritchie, L.T.; Jow, Hong-Nian
1990-02-01
This report describes the MACCS computer code. The purpose of this code is to simulate the impact of severe accidents at nuclear power plants on the surrounding environment. MACCS has been developed for the US Nuclear Regulatory Commission to replace the previous CRAC2 code, and it incorporates many improvements in modeling flexibility in comparison to CRAC2. The principal phenomena considered in MACCS are atmospheric transport, mitigative actions based on dose projection, dose accumulation by a number of pathways including food and water ingestion, early and latent health effects, and economic costs. The MACCS code can be used for a variety of applications. These include (1) probabilistic risk assessment (PRA) of nuclear power plants and other nuclear facilities, (2) sensitivity studies to gain a better understanding of the parameters important to PRA, and (3) cost-benefit analysis. This report is composed of three volumes. This document, Volume 1, the Users's Guide, describes the input data requirements of the MACCS code and provides directions for its use as illustrated by three sample problems
MELCOR Accident Consequence Code System (MACCS)
Energy Technology Data Exchange (ETDEWEB)
Chanin, D.I. (Technadyne Engineering Consultants, Inc., Albuquerque, NM (USA)); Sprung, J.L.; Ritchie, L.T.; Jow, Hong-Nian (Sandia National Labs., Albuquerque, NM (USA))
1990-02-01
This report describes the MACCS computer code. The purpose of this code is to simulate the impact of severe accidents at nuclear power plants on the surrounding environment. MACCS has been developed for the US Nuclear Regulatory Commission to replace the previous CRAC2 code, and it incorporates many improvements in modeling flexibility in comparison to CRAC2. The principal phenomena considered in MACCS are atmospheric transport, mitigative actions based on dose projection, dose accumulation by a number of pathways including food and water ingestion, early and latent health effects, and economic costs. The MACCS code can be used for a variety of applications. These include (1) probabilistic risk assessment (PRA) of nuclear power plants and other nuclear facilities, (2) sensitivity studies to gain a better understanding of the parameters important to PRA, and (3) cost-benefit analysis. This report is composed of three volumes. This document, Volume 1, the Users's Guide, describes the input data requirements of the MACCS code and provides directions for its use as illustrated by three sample problems.
International Nuclear Information System (INIS)
Popescu, Lucretiu M.
2000-01-01
A computer code package (PTSIM) for particle transport Monte Carlo simulation was developed using object oriented techniques of design and programming. A flexible system for simulation of coupled photon, electron transport, facilitating development of efficient simulation applications, was obtained. For photons: Compton and photo-electric effects, pair production and Rayleigh interactions are simulated, while for electrons, a class II condensed history scheme was considered, in which catastrophic interactions (Moeller electron-electron interaction, bremsstrahlung, etc.) are treated in detail and all other interactions with reduced individual effect on electron history are grouped together using continuous slowing down approximation and energy straggling theories. Electron angular straggling is simulated using Moliere theory or a mixed model in which scatters at large angles are treated as distinct events. Comparisons with experimentally benchmarks for electron transmission and bremsstrahlung emissions energy and angular spectra, and for dose calculations are presented
Probabilistic evaluations for CANTUP computer code analysis improvement
International Nuclear Information System (INIS)
Florea, S.; Pavelescu, M.
2004-01-01
Structural analysis with finite element method is today an usual way to evaluate and predict the behavior of structural assemblies subject to hard conditions in order to ensure their safety and reliability during their operation. A CANDU 600 fuel channel is an example of an assembly working in hard conditions, in which, except the corrosive and thermal aggression, long time irradiation, with implicit consequences on material properties evolution, interferes. That leads inevitably to material time-dependent properties scattering, their dynamic evolution being subject to a great degree of uncertainness. These are the reasons for developing, in association with deterministic evaluations with computer codes, the probabilistic and statistical methods in order to predict the structural component response. This work initiates the possibility to extend the deterministic thermomechanical evaluation on fuel channel components to probabilistic structural mechanics approach starting with deterministic analysis performed with CANTUP computer code which is a code developed to predict the long term mechanical behavior of the pressure tube - calandria tube assembly. To this purpose the structure of deterministic calculus CANTUP computer code has been reviewed. The code has been adapted from LAHEY 77 platform to Microsoft Developer Studio - Fortran Power Station platform. In order to perform probabilistic evaluations, it was added a part to the deterministic code which, using a subroutine from IMSL library from Microsoft Developer Studio - Fortran Power Station platform, generates pseudo-random values of a specified value. It was simulated a normal distribution around the deterministic value and 5% standard deviation for Young modulus material property in order to verify the statistical calculus of the creep behavior. The tube deflection and effective stresses were the properties subject to probabilistic evaluation. All the values of these properties obtained for all the values for
Comparing the coding of complications in Queensland and Victorian admitted patient data.
Michel, Jude L; Cheng, Diana; Jackson, Terri J
2011-08-01
To examine differences between Queensland and Victorian coding of hospital-acquired conditions and suggest ways to improve the usefulness of these data in the monitoring of patient safety events. Secondary analysis of admitted patient episode data collected in Queensland and Victoria. Comparison of depth of coding, and patterns in the coding of ten commonly coded complications of five elective procedures. Comparison of the mean complication codes assigned per episode revealed Victoria assigns more valid codes than Queensland for all procedures, with the difference between the states being significantly different in all cases. The proportion of the codes flagged as complications was consistently lower for Queensland when comparing 10 common complications for each of the five selected elective procedures. The estimated complication rates for the five procedures showed Victoria to have an apparently higher complication rate than Queensland for 35 of the 50 complications examined. Our findings demonstrate that the coding of complications is more comprehensive in Victoria than in Queensland. It is known that inconsistencies exist between states in routine hospital data quality. Comparative use of patient safety indicators should be viewed with caution until standards are improved across Australia. More exploration of data quality issues is needed to identify areas for improvement.
International Nuclear Information System (INIS)
Christian-Frear, T.L.; Webb, S.W.
1995-01-01
Human intrusion scenarios at the Waste Isolation Pilot Plant (WIPP) involve penetration of the repository and an underlying brine reservoir by a future borehole. Brine and gas from the brine reservoir and the repository may flow up the borehole and into the overlying Culebra formation, which is saturated with water containing different amounts of dissolved 'solids resulting in a spatially varying density. Current modeling approaches involve perturbing a steady-state Culebra flow field by inflow of gas and/or brine from a breach borehole that has passed through the repository. Previous studies simulating steady-state flow in the Culebra have been done. One specific study by LaVenue et al. (1990) used the SWIFT 2 code, a single-phase flow and transport code, to develop the steady-state flow field. Because gas may also be present in the fluids from the intrusion borehole, a two-phase code such as TOUGH2 can be used to determine the effect that emitted fluids may have on the steady-state Culebra flow field. Thus a comparison between TOUGH2 and SWIFT2 was prompted. In order to compare the two codes and to evaluate the influence of gas on flow in the Culebra, modifications were made to TOUGH2. Modifications were performed by the authors to allow for element-specific values of permeability, porosity, and elevation. The analysis also used a new equation of state module for a water-brine-air mixture, EOS7 (Pruess, 1991), which was developed to simulate variable water densities by assuming a miscible mixture of water and brine phases and allows for element-specific brine concentration in the INCON file
SWAAM code development, verification and application to steam generator design
International Nuclear Information System (INIS)
Shin, Y.W.; Valentin, R.A.
1990-01-01
This paper describes the family of SWAAM codes developed by Argonne National Laboratory to analyze the effects of sodium/water reactions on LMR steam generators. The SWAAM codes were developed as design tools for analyzing various phenomena related to steam generator leaks and to predict the resulting thermal and hydraulic effects on the steam generator and the intermediate heat transport system (IHTS). The theoretical foundations and numerical treatments on which the codes are based are discussed, followed by a description of code capabilities and limitations, verification of the codes by comparison with experiment, and applications to steam generator and IHTS design. (author). 25 refs, 14 figs
Two dimension MDW OCDMA code cross-correlation for reduction of phase induced intensity noise
Directory of Open Access Journals (Sweden)
Sh. Ahmed Israa
2017-01-01
Full Text Available In this paper, we first review 2-D MDW code cross correlation equations and table to be improved significantly by using code correlation properties. These codes can be used in the synchronous optical CDMA systems for multi access interference cancellation and maximum suppress the phase induced intensity noise. Low Psr is due to the reduction of interference noise that is induced by the 2-D MDW code PIIN suppression. High data rate causes increases in BER, requires high effective power and severely deteriorates the system performance. The 2-D W/T MDW code has an excellent system performance where the value of PIIN is suppressed as low as possible at the optimum Psr with high data bit rate. The 2-D MDW code shows better tolerance to PIIN in comparison to others with enhanced system performance. We prove by numerical analysis that the PIIN maximally suppressed by MDW code through the minimizing property of cross correlation in comparison to 2-D PDC and 2-D MQC OCDMA code.scheme systems.
Two dimension MDW OCDMA code cross-correlation for reduction of phase induced intensity noise
Ahmed, Israa Sh.; Aljunid, Syed A.; Nordin, Junita M.; Dulaimi, Layth A. Khalil Al; Matem, Rima
2017-11-01
In this paper, we first review 2-D MDW code cross correlation equations and table to be improved significantly by using code correlation properties. These codes can be used in the synchronous optical CDMA systems for multi access interference cancellation and maximum suppress the phase induced intensity noise. Low Psr is due to the reduction of interference noise that is induced by the 2-D MDW code PIIN suppression. High data rate causes increases in BER, requires high effective power and severely deteriorates the system performance. The 2-D W/T MDW code has an excellent system performance where the value of PIIN is suppressed as low as possible at the optimum Psr with high data bit rate. The 2-D MDW code shows better tolerance to PIIN in comparison to others with enhanced system performance. We prove by numerical analysis that the PIIN maximally suppressed by MDW code through the minimizing property of cross correlation in comparison to 2-D PDC and 2-D MQC OCDMA code.scheme systems.
Improved Intra-coding Methods for H.264/AVC
Directory of Open Access Journals (Sweden)
Li Song
2009-01-01
Full Text Available The H.264/AVC design adopts a multidirectional spatial prediction model to reduce spatial redundancy, where neighboring pixels are used as a prediction for the samples in a data block to be encoded. In this paper, a recursive prediction scheme and an enhanced (block-matching algorithm BMA prediction scheme are designed and integrated into the state-of-the-art H.264/AVC framework to provide a new intra coding model. Extensive experiments demonstrate that the coding efficiency can be on average increased by 0.27 dB with comparison to the performance of the conventional H.264 coding model.
GRHydro: a new open-source general-relativistic magnetohydrodynamics code for the Einstein toolkit
International Nuclear Information System (INIS)
Mösta, Philipp; Haas, Roland; Ott, Christian D; Reisswig, Christian; Mundim, Bruno C; Faber, Joshua A; Noble, Scott C; Bode, Tanja; Löffler, Frank; Schnetter, Erik
2014-01-01
We present the new general-relativistic magnetohydrodynamics (GRMHD) capabilities of the Einstein toolkit, an open-source community-driven numerical relativity and computational relativistic astrophysics code. The GRMHD extension of the toolkit builds upon previous releases and implements the evolution of relativistic magnetized fluids in the ideal MHD limit in fully dynamical spacetimes using the same shock-capturing techniques previously applied to hydrodynamical evolution. In order to maintain the divergence-free character of the magnetic field, the code implements both constrained transport and hyperbolic divergence cleaning schemes. We present test results for a number of MHD tests in Minkowski and curved spacetimes. Minkowski tests include aligned and oblique planar shocks, cylindrical explosions, magnetic rotors, Alfvén waves and advected loops, as well as a set of tests designed to study the response of the divergence cleaning scheme to numerically generated monopoles. We study the code’s performance in curved spacetimes with spherical accretion onto a black hole on a fixed background spacetime and in fully dynamical spacetimes by evolutions of a magnetized polytropic neutron star and of the collapse of a magnetized stellar core. Our results agree well with exact solutions where these are available and we demonstrate convergence. All code and input files used to generate the results are available on http://einsteintoolkit.org. This makes our work fully reproducible and provides new users with an introduction to applications of the code. (paper)
Validation of thermohydraulic codes by comparison of experimental results with computer simulations
International Nuclear Information System (INIS)
Madeira, A.A.; Galetti, M.R.S.; Pontedeiro, A.C.
1989-01-01
The results obtained by simulation of three cases from CANON depressurization experience, using the TRAC-PF1 computer code, version 7.6, implanted in the VAX-11/750 computer of Brazilian CNEN, are presented. The CANON experience was chosen as first standard problem in thermo-hydraulic to be discussed at ENFIR for comparing results from different computer codes with results obtained experimentally. The ability of TRAC-PF1 code to prevent the depressurization phase of a loss of primary collant accident in pressurized water reactors is evaluated. (M.C.K.) [pt
Recent developments for the HEADTAIL code: updating and benchmarks
Quatraro, D; Salvant, B
2010-01-01
The HEADTAIL code models the evolution of a single bunch interacting with a localized impedance source or an electron cloud, optionally including space charge. The newest version of HEADTAIL relies on a more detailed optical model of the machine taken from MAD-X and is more flexible in handling and distributing the interaction and observation points along the simulated machine. In addition, the option of the interaction with the wake field of specific accelerator components has been added, such that the user can choose to load dipolar and quadrupolar components of the wake from the impedance database ZBASE. The case of a single LHC-type bunch interacting with the realistic distribution of the kicker wake fields inside the SPS has been successfully compared with a single integrated beta-weighted kick per turn. The current version of the code also contains a new module for the longitudinal dynamics to calculate the evolution of a bunch inside an accelerating bucket.
Modelling Coupled Processes in the Evolution of Repository Engineered Barrier Systems using QPAC-EBS
Energy Technology Data Exchange (ETDEWEB)
Maul, Philip; Benbow, Steven; Bond, Alex; Robinson, Peter (Quintessa Limited, Henley-on-Thames (United Kingdom))
2010-08-15
A satisfactory understanding of the evolution of repository engineered barrier systems (EBS) is an essential part of the safety case for the repository. This involves consideration of coupled Thermal (T), Hydro (H), Mechanical (M) and Chemical (C) processes. Quintessa's general-purpose modelling code QPAC is capable of representing strongly coupled non-linear processes and has been used in a wide range of applications. This code is the basis for software used by Quintessa in studies of the evolution of the EBS in a deep repository for spent nuclear fuel undertaken for SKI and then SSM since 2007. The collection of software components employed has been referred to collectively as QPAC-EBS, consisting of the core QPAC code together with relevant modules for T, H, M and C processes. QPAC-EBS employs a fundamentally different approach from dedicated codes that model such processes (although few codes can represent each type of process), enabling the specification of new processes and the associated governing equations in code input. Studies undertaken to date have demonstrated that QPAC-EBS can be used effectively to investigate both the early evolution of the EBS and important scenarios for the later evolution of the system when buffer erosion and canister corrosion may occur. A key issue for modelling EBS evolution is the satisfactory modelling of the behaviour of the bentonite buffer. Bentonite is a difficult material to model, partly because of the complex coupled mechanical, hydro and chemical processes involved in swelling during resaturation. Models employed to date have generally taken an empirical approach, but a new model developed during the EU THERESA project could be further developed to provide a better representation of these processes. QPAC-EBS could play an important role in supporting SSM.s review of the forthcoming SR-Site assessment by SKB if used by Quintessa in independent supporting calculations. To date radionuclide transport calculations
Tracking code patterns over multiple software versions with Herodotos
DEFF Research Database (Denmark)
Palix, Nicolas Jean-Michel; Lawall, Julia; Muller, Gilles
2010-01-01
An important element of understanding a software code base is to identify the repetitive patterns of code it contains and how these evolve over time. Some patterns are useful to the software, and may be modularized. Others are detrimental to the software, such as patterns that represent defects...... pattern occurrences over multiple versions of a software project, independent of other changes in the source files. Guided by a user-provided configuration file, Herodotos builds various graphs showing the evolution of the pattern occurrences and computes some statistics. We have evaluated this approach...
Description and application of the AERIN Code at LLNL
International Nuclear Information System (INIS)
King, W.C.
1986-01-01
The AERIN code was written at the Lawrence Livermore National Laboratory in 1976 to compute the organ burdens and absorbed dose resulting from a chronic or acute inhalation of transuranic isotopes. The code was revised in 1982 to reflect the concepts of ICRP-30. This paper will describe the AERIN code and how it has been used at LLNL to study more than 80 cases of internal deposition and obtain estimates of internal dose. A comparison with the computed values of the committed organ dose is made with ICRP-30 values. The benefits of using the code are described. 3 refs., 3 figs., 6 tabs
Differentially Encoded LDPC Codes—Part II: General Case and Code Optimization
Directory of Open Access Journals (Sweden)
Li (Tiffany Jing
2008-01-01
Full Text Available This two-part series of papers studies the theory and practice of differentially encoded low-density parity-check (DE-LDPC codes, especially in the context of noncoherent detection. Part I showed that a special class of DE-LDPC codes, product accumulate codes, perform very well with both coherent and noncoherent detections. The analysis here reveals that a conventional LDPC code, however, is not fitful for differential coding and does not, in general, deliver a desirable performance when detected noncoherently. Through extrinsic information transfer (EXIT analysis and a modified "convergence-constraint" density evolution (DE method developed here, we provide a characterization of the type of LDPC degree profiles that work in harmony with differential detection (or a recursive inner code in general, and demonstrate how to optimize these LDPC codes. The convergence-constraint method provides a useful extension to the conventional "threshold-constraint" method, and can match an outer LDPC code to any given inner code with the imperfectness of the inner decoder taken into consideration.
SHARP: A Spatially Higher-order, Relativistic Particle-in-cell Code
Energy Technology Data Exchange (ETDEWEB)
Shalaby, Mohamad; Broderick, Avery E. [Department of Physics and Astronomy, University of Waterloo, 200 University Avenue West, Waterloo, ON, N2L 3G1 (Canada); Chang, Philip [Department of Physics, University of Wisconsin-Milwaukee, 1900 E. Kenwood Boulevard, Milwaukee, WI 53211 (United States); Pfrommer, Christoph [Leibniz-Institut für Astrophysik Potsdam (AIP), An der Sternwarte 16, D-14482 Potsdam (Germany); Lamberts, Astrid [Theoretical Astrophysics, California Institute of Technology, Pasadena, CA 91125 (United States); Puchwein, Ewald, E-mail: mshalaby@live.ca [Institute of Astronomy and Kavli Institute for Cosmology, University of Cambridge, Madingley Road, Cambridge, CB3 0HA (United Kingdom)
2017-05-20
Numerical heating in particle-in-cell (PIC) codes currently precludes the accurate simulation of cold, relativistic plasma over long periods, severely limiting their applications in astrophysical environments. We present a spatially higher-order accurate relativistic PIC algorithm in one spatial dimension, which conserves charge and momentum exactly. We utilize the smoothness implied by the usage of higher-order interpolation functions to achieve a spatially higher-order accurate algorithm (up to the fifth order). We validate our algorithm against several test problems—thermal stability of stationary plasma, stability of linear plasma waves, and two-stream instability in the relativistic and non-relativistic regimes. Comparing our simulations to exact solutions of the dispersion relations, we demonstrate that SHARP can quantitatively reproduce important kinetic features of the linear regime. Our simulations have a superior ability to control energy non-conservation and avoid numerical heating in comparison to common second-order schemes. We provide a natural definition for convergence of a general PIC algorithm: the complement of physical modes captured by the simulation, i.e., those that lie above the Poisson noise, must grow commensurately with the resolution. This implies that it is necessary to simultaneously increase the number of particles per cell and decrease the cell size. We demonstrate that traditional ways for testing for convergence fail, leading to plateauing of the energy error. This new PIC code enables us to faithfully study the long-term evolution of plasma problems that require absolute control of the energy and momentum conservation.
Context based Coding of Quantized Alpha Planes for Video Objects
DEFF Research Database (Denmark)
Aghito, Shankar Manuel; Forchhammer, Søren
2002-01-01
In object based video, each frame is a composition of objects that are coded separately. The composition is performed through the alpha plane that represents the transparency of the object. We present an alternative to MPEG-4 for coding of alpha planes that considers their specific properties....... Comparisons in terms of rate and distortion are provided, showing that the proposed coding scheme for still alpha planes is better than the algorithms for I-frames used in MPEG-4....
Computer codes for particle accelerator design and analysis: A compendium. Second edition
International Nuclear Information System (INIS)
Deaven, H.S.; Chan, K.C.D.
1990-05-01
The design of the next generation of high-energy accelerators will probably be done as an international collaborative efforts and it would make sense to establish, either formally or informally, an international center for accelerator codes with branches for maintenance, distribution, and consultation at strategically located accelerator centers around the world. This arrangement could have at least three beneficial effects. It would cut down duplication of effort, provide long-term support for the best codes, and provide a stimulating atmosphere for the evolution of new codes. It does not take much foresight to see that the natural evolution of accelerator design codes is toward the development of so-called Expert Systems, systems capable of taking design specifications of future accelerators and producing specifications for optimized magnetic transport and acceleration components, making a layout, and giving a fairly impartial cost estimate. Such an expert program would use present-day programs such as TRANSPORT, POISSON, and SUPERFISH as tools in the optimization process. Such a program would also serve to codify the experience of two generations of accelerator designers before it is lost as these designers reach retirement age. This document describes 203 codes that originate from 10 countries and are currently in use. The authors feel that this compendium will contribute to the dialogue supporting the international collaborative effort that is taking place in the field of accelerator physics today
International Nuclear Information System (INIS)
Katoh, Yutai; Stoller, Roger E.; Kohno, Yutaka; Kohyama, Akira
1994-01-01
A kinetic model was developed to investigate the influence of the displacement rate and helium generation rate on microstructural evolution in austenitic stainless steels. The model integrates the rate equations describing the evolution of point defects, small point defect clusters, helium-vacancy clusters, and the larger cavity size distribution that is responsible for observable swelling. Cavity (bubble) nucleation is accounted for by the helium-vacancy cluster evolution, while void formation occurs when bubbles grow beyond a critical size in the larger cavity distribution. A series of ion irradiation experiments were used to both calibrate the model and to provide a comparison between model predictions and experimental observations. The experiments involved single and dual-beam irradiations of solution annealed AISI-316 stainless steel at 873 K. The displacement rates were in the range of 2x10 -3 to 1x10 -2 dpa/s and the helium-to-dpa ratios were in the range of 0 to 50 appm He/dpa. The maximum displacement dose was 25 dpa. The experiments revealed a significant effect of helium on both the dislocation structure and the cavity distribution. The model predictions of helium effects over a broad range of He/dpa ratios and displacement rates were consistent with experimental observations. ((orig.))
Functional interrogation of non-coding DNA through CRISPR genome editing.
Canver, Matthew C; Bauer, Daniel E; Orkin, Stuart H
2017-05-15
Methodologies to interrogate non-coding regions have lagged behind coding regions despite comprising the vast majority of the genome. However, the rapid evolution of clustered regularly interspaced short palindromic repeats (CRISPR)-based genome editing has provided a multitude of novel techniques for laboratory investigation including significant contributions to the toolbox for studying non-coding DNA. CRISPR-mediated loss-of-function strategies rely on direct disruption of the underlying sequence or repression of transcription without modifying the targeted DNA sequence. CRISPR-mediated gain-of-function approaches similarly benefit from methods to alter the targeted sequence through integration of customized sequence into the genome as well as methods to activate transcription. Here we review CRISPR-based loss- and gain-of-function techniques for the interrogation of non-coding DNA. Copyright © 2017 Elsevier Inc. All rights reserved.
Comparison of TRAC calculations with experimental data
International Nuclear Information System (INIS)
Jackson, J.F.; Vigil, J.C.
1980-01-01
TRAC is an advanced best-estimate computer code for analyzing postulated accidents in light water reactors. This paper gives a brief description of the code followed by comparisons of TRAC calculations with data from a variety of separate-effects, system-effects, and integral experiments. Based on these comparisons, the capabilities and limitations of the early versions of TRAC are evaluated
Preparation of the TRANSURANUS code for TEMELIN NPP
International Nuclear Information System (INIS)
Klouzal, J.
2011-01-01
Since 2010 Temelin NPP started using TVSA-T fuel supplied by JSC TVEL. The transition process included implementation of several new core reload design codes. TRANSURANUS code was selected for the evaluation of the fuel rod thermomechanical performance. The adaptation and validation of the code was performed by Nuclear Research Institute Rez. TRANSURANUS code contains wide selection of alternative models for most of phenomena important for the fuel behaviour. It was therefore necessary to select, based on a comparison with experimental data, those most suitable for the modeling of TVSA-T fuel rods. In some cases, new models were implemented. Software tools and methodology for the evaluation of the proposed core reload design using TRANSURANUS code were also developed in NRI. The software tools include the interface to core physics code ANDREA and a set of scripts for an automated execution and processing of the computational runs. Independent confirmation of some of the vendor specified core reload design criteria was performed using TRANSURANUS. (authors)
Evaluation of the plastic characteristics of piping products in relation to ASME code criteria
International Nuclear Information System (INIS)
Rodabaugh, E.C.; Moore, S.E.
1978-07-01
Theories and test data relevant to the plastic characteristics of piping products are presented and compared with Code Equations in NB-3652 for Class 1 piping; in NC/ND-3652.2 for Class 2 and Class 3 piping. Comparisons are made for (a) straight pipe, (b) elbows, (c) branch connections, and (d) tees. The status of data (or lack of data) for other piping components is discussed. Comparisons are made between available data and the Code equations for two typical piping materials, SA106 Grade B and SA312 TP304, for Code Design Limits, and Service Limits A, B, C, and D. Conditions under which the Code Limits cannot be shown to be conservative from available data are pointed out. Based on the results of the study, recommendations for Code revisions are presented, along with recommendations for additional work
Energy Technology Data Exchange (ETDEWEB)
Ball, J.; Glowa, G.; Wren, J. [Atomic Energy of Canada Limited, Chalk River, Ontario (Canada); Ewig, F. [GRS Koln (Germany); Dickenson, S. [AEAT, (United Kingdom); Billarand, Y.; Cantrel, L. [IPSN (France); Rydl, A. [NRIR (Czech Republic); Royen, J. [OECD/NEA (France)
2001-11-01
This report describes the results of the second phase of International Standard Problem (ISP) 41, an iodine behaviour code comparison exercise. The first phase of the study, which was based on a simple Radioiodine Test Facility (RTF) experiment, demonstrated that all of the iodine behaviour codes had the capability to reproduce iodine behaviour for a narrow range of conditions (single temperature, no organic impurities, controlled pH steps). The current phase, a parametric study, was designed to evaluate the sensitivity of iodine behaviour codes to boundary conditions such as pH, dose rate, temperature and initial I{sup -} concentration. The codes used in this exercise were IODE(IPSN), IODE(NRIR), IMPAIR(GRS), INSPECT(AEAT), IMOD(AECL) and LIRIC(AECL). The parametric study described in this report identified several areas of discrepancy between the various codes. In general, the codes agree regarding qualitative trends, but their predictions regarding the actual amount of volatile iodine varied considerably. The largest source of the discrepancies between code predictions appears to be their different approaches to modelling the formation and destruction of organic iodides. A recommendation arising from this exercise is that an additional code comparison exercise be performed on organic iodide formation, against data obtained front intermediate-scale studies (two RTF (AECL, Canada) and two CAIMAN facility, (IPSN, France) experiments have been chosen). This comparison will allow each of the code users to realistically evaluate and improve the organic iodide behaviour sub-models within their codes. (author)
International Nuclear Information System (INIS)
Ball, J.; Glowa, G.; Wren, J.; Ewig, F.; Dickenson, S.; Billarand, Y.; Cantrel, L.; Rydl, A.; Royen, J.
2001-11-01
This report describes the results of the second phase of International Standard Problem (ISP) 41, an iodine behaviour code comparison exercise. The first phase of the study, which was based on a simple Radioiodine Test Facility (RTF) experiment, demonstrated that all of the iodine behaviour codes had the capability to reproduce iodine behaviour for a narrow range of conditions (single temperature, no organic impurities, controlled pH steps). The current phase, a parametric study, was designed to evaluate the sensitivity of iodine behaviour codes to boundary conditions such as pH, dose rate, temperature and initial I - concentration. The codes used in this exercise were IODE(IPSN), IODE(NRIR), IMPAIR(GRS), INSPECT(AEAT), IMOD(AECL) and LIRIC(AECL). The parametric study described in this report identified several areas of discrepancy between the various codes. In general, the codes agree regarding qualitative trends, but their predictions regarding the actual amount of volatile iodine varied considerably. The largest source of the discrepancies between code predictions appears to be their different approaches to modelling the formation and destruction of organic iodides. A recommendation arising from this exercise is that an additional code comparison exercise be performed on organic iodide formation, against data obtained front intermediate-scale studies (two RTF (AECL, Canada) and two CAIMAN facility, (IPSN, France) experiments have been chosen). This comparison will allow each of the code users to realistically evaluate and improve the organic iodide behaviour sub-models within their codes. (author)
Monte Carlo code criticality benchmark comparisons for waste packaging
International Nuclear Information System (INIS)
Alesso, H.P.; Annese, C.E.; Buck, R.M.; Pearson, J.S.; Lloyd, W.R.
1992-07-01
COG is a new point-wise Monte Carlo code being developed and tested at Lawrence Livermore National Laboratory (LLNL). It solves the Boltzmann equation for the transport of neutrons and photons. The objective of this paper is to report on COG results for criticality benchmark experiments both on a Cray mainframe and on a HP 9000 workstation. COG has been recently ported to workstations to improve its accessibility to a wider community of users. COG has some similarities to a number of other computer codes used in the shielding and criticality community. The recently introduced high performance reduced instruction set (RISC) UNIX workstations provide computational power that approach mainframes at a fraction of the cost. A version of COG is currently being developed for the Hewlett Packard 9000/730 computer with a UNIX operating system. Subsequent porting operations will move COG to SUN, DEC, and IBM workstations. In addition, a CAD system for preparation of the geometry input for COG is being developed. In July 1977, Babcock ampersand Wilcox Co. (B ampersand W) was awarded a contract to conduct a series of critical experiments that simulated close-packed storage of LWR-type fuel. These experiments provided data for benchmarking and validating calculational methods used in predicting K-effective of nuclear fuel storage in close-packed, neutron poisoned arrays. Low enriched UO2 fuel pins in water-moderated lattices in fuel storage represent a challenging criticality calculation for Monte Carlo codes particularly when the fuel pins extend out of the water. COG and KENO calculational results of these criticality benchmark experiments are presented
PAPIRUS - a computer code for FBR fuel performance analysis
International Nuclear Information System (INIS)
Kobayashi, Y.; Tsuboi, Y.; Sogame, M.
1991-01-01
The FBR fuel performance analysis code PAPIRUS has been developed to design fuels for demonstration and future commercial reactors. A pellet structural model was developed to describe the generation, depletion and transport of vacancies and atomic elements in unified fashion. PAPIRUS results in comparison with the power - to - melt test data from HEDL showed validity of the code at the initial reactor startup. (author)
Library of neutron cross sections of the Thermos code
International Nuclear Information System (INIS)
Alonso V, G.; Hernandez L, H.
1991-10-01
The present work is the complement of the IT.SN/DFR-017 report in which the structure and the generation of the library of the Thermos code is described. In this report the comparison among the values of the cross sections that has the current library of the Thermos code and those generated by means of the ENDF-B/NJOY it is shown. (Author)
International Nuclear Information System (INIS)
Merle-Szeremeta, A.; Thomassin, A.
1999-01-01
The Institute of Protection and Nuclear Safety (I.P.S.N.) has developed a computer code, FOCON96 1.0 to calculate the dosimetric consequences of atmospheric radioactive releases from nuclear installations after several years of usual operation. This communication describes the principal characteristics of FOCON96 1.0 and its functionalities. The principal elements of a comparison between FOCON96 1.0 and PC-CREAM ( European computer code developed by the N.R.P.B. and answering the same criteria) are given here. (N.C.)
Status of the ASTEC integral code
International Nuclear Information System (INIS)
Van Dorsselaere, J.P.; Jacq, F.; Allelein, H.J.
2000-01-01
The ASTEC (Accident Source Term Evaluation Code) integrated code is developed since 1997 in close collaboration by IPSN and GRS to predict an entire LWR severe accident sequence from the initiating event up to Fission Product (FP) release out of the containment. The applications of such a code are source term determination studies, scenario evaluations, accident management studies and Probabilistic Safety Assessment level 2 (PSA-2) studies. The version V0 of ASTEC is based on the RCS modules of the ESCADRE integrated code (IPSN) and on the upgraded RALOC and FIPLOC codes (GRS) for containment thermalhydraulics and aerosol behaviour. The latest version V0.2 includes the general feed-back from the overall validation performed in 1998 (25 separate-effect experiments, PHEBUS.FP FPT1 integrated experiment), some modelling improvements (i.e. silver-iodine reactions in the containment sump), and the implementation of the main safety systems for Severe Accident Management. Several reactor-applications are under way on French and German PWR, and on VVER-1000, all with a multi-compartment configuration of the containment. The total IPSN-GRS manpower involved in ASTEC project is today about 20 men/year. The main evolution of the next version V1, foreseen end of 2001, concerns the integration of the front-end phase and the improvement of the in-vessel degradation late-phase modelling. (author)
SWAAM-LT: The long-term, sodium/water reaction analysis method computer code
International Nuclear Information System (INIS)
Shin, Y.W.; Chung, H.H.; Wiedermann, A.H.; Tanabe, H.
1993-01-01
The SWAAM-LT Code, developed for analysis of long-term effects of sodium/water reactions, is discussed. The theoretical formulation of the code is described, including the introduction of system matrices for ease of computer programming as a general system code. Also, some typical results of the code predictions for available large scale tests are presented. Test data for the steam generator design with the cover-gas feature and without the cover-gas feature are available and analyzed. The capabilities and limitations of the code are then discussed in light of the comparison between the code prediction and the test data
Directory of Open Access Journals (Sweden)
Josephine A Reinhardt
Full Text Available How non-coding DNA gives rise to new protein-coding genes (de novo genes is not well understood. Recent work has revealed the origins and functions of a few de novo genes, but common principles governing the evolution or biological roles of these genes are unknown. To better define these principles, we performed a parallel analysis of the evolution and function of six putatively protein-coding de novo genes described in Drosophila melanogaster. Reconstruction of the transcriptional history of de novo genes shows that two de novo genes emerged from novel long non-coding RNAs that arose at least 5 MY prior to evolution of an open reading frame. In contrast, four other de novo genes evolved a translated open reading frame and transcription within the same evolutionary interval suggesting that nascent open reading frames (proto-ORFs, while not required, can contribute to the emergence of a new de novo gene. However, none of the genes arose from proto-ORFs that existed long before expression evolved. Sequence and structural evolution of de novo genes was rapid compared to nearby genes and the structural complexity of de novo genes steadily increases over evolutionary time. Despite the fact that these genes are transcribed at a higher level in males than females, and are most strongly expressed in testes, RNAi experiments show that most of these genes are essential in both sexes during metamorphosis. This lethality suggests that protein coding de novo genes in Drosophila quickly become functionally important.
Differences in the Concept of Fitness Between Artificial Evolution and Natural Selection
Adami, Christoph; Bryson, David M.; Ofria, Charles; Pennock, Robert T.; Lichocki, Pawel; Keller, Laurent; Floreano, Dario
2012-01-01
Evolutionary algorithms were proposed to automatically find solutions to computational problems, much like evolution discovers new adaptive traits. Lately, they have been used to address challenging questions about the evolution of modularity, the genetic code, communication, division of labor and cooperation. Evolutionary algorithms are increasingly popular in biological studies, because they give precise control over the experimental conditions and allow the study of evolution at unpreceden...
Comparative calculations on selected two-phase flow phenomena using major PWR system codes
International Nuclear Information System (INIS)
1990-01-01
In 1988 a comparative study on important features and models in six major best estimate thermal hydraulic codes for PWR systems was implemented (Comparison of thermal hydraulic safety codes for PWR Graham, Trotman, London, EUR 11522). It was a limitation of that study that the source codes themselves were not available but the comparison had to be based on the available documentation. In the present study, the source codes were available and the capability of four system codes to predict complex two-phase flow phenomena has been assessed. Two areas of investigation were selected: (a) pressurized spray phenomena; (b) boil-up phenomena in rod bundles. As regards the first area, experimental data obtained in 1972 on the Neptunus Facility (Delft University of Technology) were compared with the results of the calculations using Athlet, Cathare, Relap 5 and TRAC-PT1 and, concerning the second area, the results of two experimental facilities obtained in 1980 and 1985 on Thetis (UKEA) and Pericles (CEA-Grenoble) were considered
Benchmarking NNWSI flow and transport codes: COVE 1 results
International Nuclear Information System (INIS)
Hayden, N.K.
1985-06-01
The code verification (COVE) activity of the Nevada Nuclear Waste Storage Investigations (NNWSI) Project is the first step in certification of flow and transport codes used for NNWSI performance assessments of a geologic repository for disposing of high-level radioactive wastes. The goals of the COVE activity are (1) to demonstrate and compare the numerical accuracy and sensitivity of certain codes, (2) to identify and resolve problems in running typical NNWSI performance assessment calculations, and (3) to evaluate computer requirements for running the codes. This report describes the work done for COVE 1, the first step in benchmarking some of the codes. Isothermal calculations for the COVE 1 benchmarking have been completed using the hydrologic flow codes SAGUARO, TRUST, and GWVIP; the radionuclide transport codes FEMTRAN and TRUMP; and the coupled flow and transport code TRACR3D. This report presents the results of three cases of the benchmarking problem solved for COVE 1, a comparison of the results, questions raised regarding sensitivities to modeling techniques, and conclusions drawn regarding the status and numerical sensitivities of the codes. 30 refs
Variable-length code construction for incoherent optical CDMA systems
Lin, Jen-Yung; Jhou, Jhih-Syue; Wen, Jyh-Horng
2007-04-01
The purpose of this study is to investigate the multirate transmission in fiber-optic code-division multiple-access (CDMA) networks. In this article, we propose a variable-length code construction for any existing optical orthogonal code to implement a multirate optical CDMA system (called as the multirate code system). For comparison, a multirate system where the lower-rate user sends each symbol twice is implemented and is called as the repeat code system. The repetition as an error-detection code in an ARQ scheme in the repeat code system is also investigated. Moreover, a parallel approach for the optical CDMA systems, which is proposed by Marić et al., is also compared with other systems proposed in this study. Theoretical analysis shows that the bit error probability of the proposed multirate code system is smaller than other systems, especially when the number of lower-rate users is large. Moreover, if there is at least one lower-rate user in the system, the multirate code system accommodates more users than other systems when the error probability of system is set below 10 -9.
Energy Technology Data Exchange (ETDEWEB)
Mendez, A J; Hernandez, V J; Gagliardi, R M; Bennett, C V
2009-06-19
Pulse position modulation (PPM) signaling is favored in intensity modulated/direct detection (IM/DD) systems that have average power limitations. Combining PPM with WDM over a fiber link (WDM/PPM) enables multiple accessing and increases the link's throughput. Electronic bandwidth and synchronization advantages are further gained by mapping the time slots of PPM onto a code space, or code/pulse-position-swapping (C/PPS). The property of multiple bits per symbol typical of PPM can be combined with multiple accessing by using wavelength/time [W/T] codes in C/PPS. This paper compares the performance of WDM/PPM and C/PPS for equal wavelengths and bandwidth.
CONTEMPT-DG containment analysis code
International Nuclear Information System (INIS)
Deem, R.E.; Rousseau, K.
1982-01-01
The assessment of hydrogen burning in a containment building during a degraded core event requires a knowledge of various system responses. These system responses (i.e. heat sinks, fan cooler units, sprays, etc.) can have a marked effect on the overall containment integrity results during a hydrogen burn. In an attempt to properly handle the various system responses and still retain the capability to perform sensitivity analysis on various parameters, the CONTEMPT-DG computer code was developed. This paper will address the historical development of the code, its various features, and the rationale for its development. Comparisons between results from the CONTEMPT-DG analyses and results from similar MARCH analyses will also be given
Spectral/spatial optical CDMA code based on Diagonal Eigenvalue Unity
Najjar, Monia; Jellali, Nabiha; Ferchichi, Moez; Rezig, Houria
2017-11-01
A new two dimensional Diagonal Eigenvalue Unity (2D-DEU) code is developed for the spectral⧹spatial optical code division multiple access (OCDMA) system. It has a lower cross correlation value compared to two dimensional diluted perfect difference (2D-DPD), two dimensional Extended Enhanced Double Weight (2D-Extended-EDW) codes. Also, for the same code length, the number of users can be generated by the 2D-DEU code is higher than that provided by the others codes. The Bit Error Rate (BER) numerical analysis is developed by considering the effects of shot noise, phase induced intensity noise (PIIN), and thermal noise. The main result shows that BER is strongly affected by PIIN for the higher source power. The 2D-DEU code performance is compared with 2D-DPD, 2D-Extended-EDW and two dimensional multi-diagonals (2D-MD) codes. This comparison proves that the proposed 2D-DEU system outperforms the related codes.
Jos, Sujit; Kumar, Preetam; Chakrabarti, Saswat
Orthogonal and quasi-orthogonal codes are integral part of any DS-CDMA based cellular systems. Orthogonal codes are ideal for use in perfectly synchronous scenario like downlink cellular communication. Quasi-orthogonal codes are preferred over orthogonal codes in the uplink communication where perfect synchronization cannot be achieved. In this paper, we attempt to compare orthogonal and quasi-orthogonal codes in presence of timing synchronization error. This will give insight into the synchronization demands in DS-CDMA systems employing the two classes of sequences. The synchronization error considered is smaller than chip duration. Monte-Carlo simulations have been carried out to verify the analytical and numerical results.
Survey of 1 1/2D transport codes
International Nuclear Information System (INIS)
Grad, H.
1978-10-01
A survey is given of a family of classical transport codes, recently termed ''1 1/2D'', which efficiently and accurately follow the evolution of plasma configurations on a long time scale, following coupled changes in plasma shape and topology with transport (but not wave motion). Codes have been constructed and operated (since 1974) which include various combinations of finite beta, general plasma cross-section and aspect, various topologies (Doublet, tearing, reversed-field mirror) including time dependent transitions in topology resulting from external coil variation and plasma transport, with models including (classical) tensor resistivity and heat flow as well as the adiabatic limiting case
Comparison of GLIMPS and HFAST Stirling engine code predictions with experimental data
Geng, Steven M.; Tew, Roy C.
1992-01-01
Predictions from GLIMPS and HFAST design codes are compared with experimental data for the RE-1000 and SPRE free piston Stirling engines. Engine performance and available power loss predictions are compared. Differences exist between GLIMPS and HFAST loss predictions. Both codes require engine specific calibration to bring predictions and experimental data into agreement.
Comparison of GLIMPS and HFAST Stirling engine code predictions with experimental data
International Nuclear Information System (INIS)
Geng, S.M.; Tew, R.C.
1994-01-01
Predictions from GLIMPS and HFAST design codes are compared with experimental data for the RE-1000 and SPRE free-piston Stirling engines. Engine performance and available power loss predictions are compared. Differences exist between GLIMPS and HFAST loss predictions. Both codes require engine-specific calibration to bring predictions and experimental data into agreement
GAPCON-THERMAL-3 code description
International Nuclear Information System (INIS)
Lanning, D.D.; Mohr, C.L.; Panisko, F.E.; Stewart, K.B.
1978-01-01
GAPCON-3 is a computer program that predicts the thermal and mechanical behavior of an operating fuel rod during its normal lifetime. The code calculates temperatures, dimensions, stresses, and strains for the fuel and the cladding in both the radial and axial directions for each step of the user specified power history. The method of weighted residuals is for the steady state temperature calculation, and is combined with a finite difference approximation of the time derivative for transient conditions. The stress strain analysis employs an iterative axisymmetric finite element procedure that includes plasticity and creep for normal and pellet-clad mechanical interaction loads. GAPCON-3 can solve steady state and operational transient problems. Comparisons of GAPCON-3 predictions to both closed form analytical solutions and actual inpile instrumented fuel rod data have demonstrated the ability of the code to calculate fuel rod behavior. GAPCON-3 features a restart capability and an associated plot package unavailable in previous GAPCON series codes
GAPCON-THERMAL-3 code description
Energy Technology Data Exchange (ETDEWEB)
Lanning, D.D.; Mohr, C.L.; Panisko, F.E.; Stewart, K.B.
1978-01-01
GAPCON-3 is a computer program that predicts the thermal and mechanical behavior of an operating fuel rod during its normal lifetime. The code calculates temperatures, dimensions, stresses, and strains for the fuel and the cladding in both the radial and axial directions for each step of the user specified power history. The method of weighted residuals is for the steady state temperature calculation, and is combined with a finite difference approximation of the time derivative for transient conditions. The stress strain analysis employs an iterative axisymmetric finite element procedure that includes plasticity and creep for normal and pellet-clad mechanical interaction loads. GAPCON-3 can solve steady state and operational transient problems. Comparisons of GAPCON-3 predictions to both closed form analytical solutions and actual inpile instrumented fuel rod data have demonstrated the ability of the code to calculate fuel rod behavior. GAPCON-3 features a restart capability and an associated plot package unavailable in previous GAPCON series codes.
Computing Challenges in Coded Mask Imaging
Skinner, Gerald
2009-01-01
This slide presaentation reviews the complications and challenges in developing computer systems for Coded Mask Imaging telescopes. The coded mask technique is used when there is no other way to create the telescope, (i.e., when there are wide fields of view, high energies for focusing or low energies for the Compton/Tracker Techniques and very good angular resolution.) The coded mask telescope is described, and the mask is reviewed. The coded Masks for the INTErnational Gamma-Ray Astrophysics Laboratory (INTEGRAL) instruments are shown, and a chart showing the types of position sensitive detectors used for the coded mask telescopes is also reviewed. Slides describe the mechanism of recovering an image from the masked pattern. The correlation with the mask pattern is described. The Matrix approach is reviewed, and other approaches to image reconstruction are described. Included in the presentation is a review of the Energetic X-ray Imaging Survey Telescope (EXIST) / High Energy Telescope (HET), with information about the mission, the operation of the telescope, comparison of the EXIST/HET with the SWIFT/BAT and details of the design of the EXIST/HET.
Optical code-division multiple-access networks
Andonovic, Ivan; Huang, Wei
1999-04-01
This review details the approaches adopted to implement classical code division multiple access (CDMA) principles directly in the optical domain, resulting in all optical derivatives of electronic systems. There are a number of ways of realizing all-optical CDMA systems, classified as incoherent and coherent based on spreading in the time and frequency dimensions. The review covers the basic principles of optical CDMA (OCDMA), the nature of the codes used in these approaches and the resultant limitations on system performance with respect to the number of stations (code cardinality), the number of simultaneous users (correlation characteristics of the families of codes), concluding with consideration of network implementation issues. The latest developments will be presented with respect to the integration of conventional time spread codes, used in the bulk of the demonstrations of these networks to date, with wavelength division concepts, commonplace in optical networking. Similarly, implementations based on coherent correlation with the aid of a local oscillator will be detailed and comparisons between approaches will be drawn. Conclusions regarding the viability of these approaches allowing the goal of a large, asynchronous high capacity optical network to be realized will be made.
RBMK-LOCA-Analyses with the ATHLET-Code
Energy Technology Data Exchange (ETDEWEB)
Petry, A. [Gesellschaft fuer Anlagen- und Reaktorsicherheit (GRS) mbH Kurfuerstendamm, Berlin (Germany); Domoradov, A.; Finjakin, A. [Research and Development Institute of Power Engineering, Moscow (Russian Federation)
1995-09-01
The scientific technical cooperation between Germany and Russia includes the area of adaptation of several German codes for the Russian-designed RBMK-reactor. One point of this cooperation is the adaptation of the Thermal-Hydraulic code ATHLET (Analyses of the Thermal-Hydraulics of LEaks and Transients), for RBMK-specific safety problems. This paper contains a short description of a RBMK-1000 reactor circuit. Furthermore, the main features of the thermal-hydraulic code ATHLET are presented. The main assumptions for the ATHLET-RBMK model are discussed. As an example for the application, the results of test calculations concerning a guillotine type rupture of a distribution group header are presented and discussed, and the general analysis conditions are described. A comparison with corresponding RELAP-calculations is given. This paper gives an overview on some problems posed and experience by application of Western best-estimate codes for RBMK-calculations.
Optimal codes as Tanner codes with cyclic component codes
DEFF Research Database (Denmark)
Høholdt, Tom; Pinero, Fernando; Zeng, Peng
2014-01-01
In this article we study a class of graph codes with cyclic code component codes as affine variety codes. Within this class of Tanner codes we find some optimal binary codes. We use a particular subgraph of the point-line incidence plane of A(2,q) as the Tanner graph, and we are able to describe ...
International Nuclear Information System (INIS)
D'Auria, Francesco; Moreno, Jose Luis Gago; Galassi, Giorgio Maria; Grgic, Davor; Spadoni, Antonino
2003-01-01
A comprehensive analysis of the double ended main steam line break (MSLB) accident assumed to occur in the Babcock and Wilcox Three Mile Island Unit 1 (TMI-1) has been carried out at the Dipartimento di Ingegneria Meccanica, Nucleare e della Produzione of the University of Pisa, Italy, in cooperation with the University of Zagreb, Croatia. The overall activity has been completed within the framework of the participation in the Organization for Economic Cooperation and Development-Committee on the Safety of Nuclear Installations-Nuclear Science Committee pressurized water reactor MSLB benchmark.Thermal-hydraulic system codes (various versions of Relap5), three-dimensional (3-D) neutronics codes (Parcs, Quabbox, and Nestle), and one subchannel code (Cobra) have been adopted for the analysis. Results from the following codes (or code versions) are assumed as reference:1. Relap5/mod3.2.2, beta version, coupled with the 3-D neutron kinetics Parcs code parallel virtual machine (PVM) coupling2. Relap5/mod3.2.2, gamma version, coupled with the 3-D neutron kinetics Quabbox code (direct coupling)3. Relap5/3D code coupled with the 3-D neutron kinetics Nestle code.The influence of PVM and of direct coupling is also discussed.Boundary and initial conditions of the system, including those relevant to the fuel status, have been supplied by Pennsylvania State University in cooperation with GPU Nuclear Corporation (the utility, owner of TMI) and the U.S. Nuclear Regulatory Commission. The comparison among the results obtained by adopting the same thermal-hydraulic nodalization and the coupled code version is discussed in this paper.The capability of the control rods to recover the accident has been demonstrated in all the cases as well as the capability of all the codes to predict the time evolution of the assigned transient. However, one stuck control rod caused some 'recriticality' or 'return to power' whose magnitude is largely affected by boundary and initial conditions
Analysis of results of AZTRAN and AZKIND codes for a BWR
International Nuclear Information System (INIS)
Bastida O, G. E.; Vallejo Q, J. A.; Galicia A, J.; Francois L, J. L.; Xolocostli M, J. V.; Rodriguez H, A.; Gomez T, A. M.
2016-09-01
This paper presents an analysis of results obtained from simulations performed with the neutron transport code AZTRAN and the kinetic code of neutron diffusion AZKIND, based on comparisons with models corresponding to a typical BWR, in order to verify the behavior and reliability of the values obtained with said code for its current development. For this, simulations of different geometries were made using validated nuclear codes, such as CASMO, MCNP5 and Serpent. The results obtained are considered adequate since they are comparable with those obtained and reported with other codes, based mainly on the neutron multiplication factor and the power distribution of the same. (Author)
WDEC: A Code for Modeling White Dwarf Structure and Pulsations
Bischoff-Kim, Agnès; Montgomery, Michael H.
2018-05-01
The White Dwarf Evolution Code (WDEC), written in Fortran, makes models of white dwarf stars. It is fast, versatile, and includes the latest physics. The code evolves hot (∼100,000 K) input models down to a chosen effective temperature by relaxing the models to be solutions of the equations of stellar structure. The code can also be used to obtain g-mode oscillation modes for the models. WDEC has a long history going back to the late 1960s. Over the years, it has been updated and re-packaged for modern computer architectures and has specifically been used in computationally intensive asteroseismic fitting. Generations of white dwarf astronomers and dozens of publications have made use of the WDEC, although the last true instrument paper is the original one, published in 1975. This paper discusses the history of the code, necessary to understand why it works the way it does, details the physics and features in the code today, and points the reader to where to find the code and a user guide.
Development and validation of ALEPH Monte Carlo burn-up code
International Nuclear Information System (INIS)
Stankovskiy, A.; Van den Eynde, G.; Vidmar, T.
2011-01-01
The Monte-Carlo burn-up code ALEPH is being developed in SCK-CEN since 2004. Belonging to the category of shells coupling Monte Carlo transport (MCNP or MCNPX) and 'deterministic' depletion codes (ORIGEN-2.2), ALEPH possess some unique features that distinguish it from other codes. The most important feature is full data consistency between steady-state Monte Carlo and time-dependent depletion calculations. Recent improvements of ALEPH concern full implementation of general-purpose nuclear data libraries (JEFF-3.1.1, ENDF/B-VII, JENDL-3.3). The upgraded version of the code is capable to treat isomeric branching ratios, neutron induced fission product yields, spontaneous fission yields and energy release per fission recorded in ENDF-formatted data files. The alternative algorithm for time evolution of nuclide concentrations is added. A predictor-corrector mechanism and the calculation of nuclear heating are available as well. The validation of the code on REBUS experimental programme results has been performed. The upgraded version of ALEPH has shown better agreement with measured data than other codes, including previous version of ALEPH. (authors)
Real coded genetic algorithm for fuzzy time series prediction
Jain, Shilpa; Bisht, Dinesh C. S.; Singh, Phool; Mathpal, Prakash C.
2017-10-01
Genetic Algorithm (GA) forms a subset of evolutionary computing, rapidly growing area of Artificial Intelligence (A.I.). Some variants of GA are binary GA, real GA, messy GA, micro GA, saw tooth GA, differential evolution GA. This research article presents a real coded GA for predicting enrollments of University of Alabama. Data of Alabama University is a fuzzy time series. Here, fuzzy logic is used to predict enrollments of Alabama University and genetic algorithm optimizes fuzzy intervals. Results are compared to other eminent author works and found satisfactory, and states that real coded GA are fast and accurate.
Development and validation of an improved version of the DART code
International Nuclear Information System (INIS)
Taboada, H; Moscarda, M.V.; Markiewicz, M.; Estevez, E.; Rest, J.
2002-01-01
ANL/USDOE and CNEA Argentina have been participating within a SisterLab Program in the area of Low Enriched Uranium Advanced Fuels since October 16, 1997 under the 'Implementation Arrangement for Technical Exchange and Cooperation in the Area of Peaceful Uses of Nuclear Energy'. An annex concerning DART code optimization has been operative since February 8, 1999. Previously, as a part of this annex we developed a visual version of DART named FASTDART for silicide and U-Mo fuels that was presented at the RERTR Meeting in Las Vegas, Nevada. This paper describes several major improvements in the FASTDART code: a thermal calculation subroutine, a fuel particle size distribution subroutine and several visual interfaces for thermal output plotting and particle size input. Using the power history, coolant regime data and fuel dimensions, the new thermal subroutine is able to calculate at each time step the maximum temperature along the z-longitudinal axis as a function of plate/rod morphology (corrosion oxide, cladding, meat, aluminide particle layer, each radial shell of a central fuel particle, and particle center). Calculated temperatures at each time step are coupled to the DART calculation kernel such that swelling processes, volume phase fractions and meat thermal conductivity are calculated synergistically. The new fuel particle size-distribution subroutine is essential in order to determine the evolution of the volume fraction of reaction product. This phase degrades the heat transport by a twofold mechanism: its appearance implies a diminution of aluminium phase and its thermal conductivity is lower than those of fuel and dispersant phase. The new version includes the capability of plotting thermal data output by means of the plate/rod temperature profile at a given irradiation step, and displaying the maximum temperature evolution of each layer. A comparison between the reaction layer thickness and matrix and fuel volume fractions of several RERTR-3 experiment
Evolution of the genus Aristolochia - Systematics, Molecular Evolution and Ecology
Wanke, Stefan
2007-01-01
Evolution of Piperales – matK gene and trnK intron sequence data reveal lineage specific resolution contrast. Piperales are one of the largest basal angiosperm orders with a nearly worldwide distribution. The order includes three species rich genera, Piper (ca. 1,000 species), Peperomia (ca. 1,500-1,700 species), and Aristolochia s. l. (ca. 500 species). Sequences of the matK gene and the non-coding trnK group II intron are analysed for a dense set of 105 taxa representing all families (excep...
Studies of Planet Formation using a Hybrid N-body + Planetesimal Code
Kenyon, Scott J.; Bromley, Benjamin C.; Salamon, Michael (Technical Monitor)
2005-01-01
The goal of our proposal was to use a hybrid multi-annulus planetesimal/n-body code to examine the planetesimal theory, one of the two main theories of planet formation. We developed this code to follow the evolution of numerous 1 m to 1 km planetesimals as they collide, merge, and grow into full-fledged planets. Our goal was to apply the code to several well-posed, topical problems in planet formation and to derive observational consequences of the models. We planned to construct detailed models to address two fundamental issues: 1) icy planets - models for icy planet formation will demonstrate how the physical properties of debris disks, including the Kuiper Belt in our solar system, depend on initial conditions and input physics; and 2) terrestrial planets - calculations following the evolution of 1-10 km planetesimals into Earth-mass planets and rings of dust will provide a better understanding of how terrestrial planets form and interact with their environment. During the past year, we made progress on each issue. Papers published in 2004 are summarized. Summaries of work to be completed during the first half of 2005 and work planned for the second half of 2005 are included.
Hydrogen burn assessment with the CONTAIN code
International Nuclear Information System (INIS)
van Rij, H.M.
1986-01-01
The CONTAIN computer code was developed at Sandia National Laboratories, under contract to the US Nuclear Regulatory Commission (NRC). The code is intended for calculations of containment loads during severe accidents and for prediction of the radioactive source term in the event that the containment leaks or fails. A strong point of the CONTAIN code is the continuous interaction of the thermal-hydraulics phenomena, aerosol behavior and fission product behavior. The CONTAIN code can be used for Light Water Reactors as well as Liquid Metal Reactors. In order to evaluate the CONTAIN code on its merits, comparisons between the code and experiments must be made. In this paper, CONTAIN calculations for the hydrogen burn experiments, carried out at the Nevada Test Site (NTS), are presented and compared with the experimental data. In the Large-Scale Hydrogen Combustion Facility at the NTS, 21 tests have been carried out. These tests were sponsored by the NRC and the Electric Power Research Institute (EPRI). The tests, carried out by EG and G, were performed in a spherical vessel 16 m in diameter with a design pressure of 700 kPa, substantially higher than that of most commercial nuclear containment buildings
The Prediction of Microstructure Evolution of 6005A Aluminum Alloy in a P-ECAP Extrusion Study
Lei, Shi; Jiu-Ba, Wen; Chang, Ren
2018-04-01
Finite element modeling (FEM) was applied for predicting the recrystallized structure in extruded 6005 aluminum alloy, and simulated results were experimentally validated. First, microstructure evolution of 6005 aluminum alloy during deformation was studied by means of isothermal compression test, where the processing parameters were chosen to reproduce the typical industrial conditions. Second, microstructure evolution was analyzed, and the obtained information was used to fit a dynamic recrystallization model implementing inside the DEFORM-3D FEM code environment. FEM of deformation of 6005 aluminum has been established and validated by microstructure comparison. Finally, the obtained dynamic recrystallization model was applied to tube extrusion by using a portholes-equal channel angular pressing die. The finite element analysis results showed that coarse DRX grains occur in the extruded tube at higher temperature and in the extruded tube at the faster speed of the stem. The test results showed material from the front end of the extruded tube has coarse grains (60 μm) and other extruded tube has finer grains (20 μm).
The Prediction of Microstructure Evolution of 6005A Aluminum Alloy in a P-ECAP Extrusion Study
Lei, Shi; Jiu-Ba, Wen; Chang, Ren
2018-05-01
Finite element modeling (FEM) was applied for predicting the recrystallized structure in extruded 6005 aluminum alloy, and simulated results were experimentally validated. First, microstructure evolution of 6005 aluminum alloy during deformation was studied by means of isothermal compression test, where the processing parameters were chosen to reproduce the typical industrial conditions. Second, microstructure evolution was analyzed, and the obtained information was used to fit a dynamic recrystallization model implementing inside the DEFORM-3D FEM code environment. FEM of deformation of 6005 aluminum has been established and validated by microstructure comparison. Finally, the obtained dynamic recrystallization model was applied to tube extrusion by using a portholes-equal channel angular pressing die. The finite element analysis results showed that coarse DRX grains occur in the extruded tube at higher temperature and in the extruded tube at the faster speed of the stem. The test results showed material from the front end of the extruded tube has coarse grains (60 μm) and other extruded tube has finer grains (20 μm).
Comparison of the MAAP4 code with the station blackout simulation in the IIST facility
International Nuclear Information System (INIS)
Robert E Henry; Christopher E Henry; Chan Y Paik; George M Hauser
2005-01-01
Full text of publication follows: The Modular Accident Analysis Program (MAAP) is an integral system model to assess challenges to the reactor core, Reactor Coolant System (RCS) and containment for accident conditions. MAAP4 is the current version used by the MAAP Users Group to assess the responses to a spectrum of accident conditions. Benchmarking of the MAAP code with integral system experiments has been a continuing effort by MAAP developers and users. Several of these have been configured into dynamic benchmarks and are included in Volume III (Benchmarking) of the MAAP4 Users Manual (EPRI, 2004). One such integral experiment is the INER integral system test (IIST) constructed at the Institute of Nuclear Energy Research in Taiwan. This experimental facility is a reduced height, reduced pressure representation of a 3-loop PWR and has been used to examine several different types of accident sequences. One of these is a station blackout simulation with loss of auxiliary feedwater at the time that the transient is initiated. This is an important integral experiment to be compared with the MAAP4 code models. A parameter file (those values representing the system design and boundary experimental conditions) has been developed for the IIST facility and an input deck has been configured to represent a station blackout sequence with instantaneous loss of auxiliary feedwater. Of importance in this benchmark is (a) the rate at which the secondary side inventory is depleted, (b) the depletion of water within the reactor pressure vessel and (c) the time at which the top of the reactor core is uncovered. Comparisons have been made with these three different intervals and there is good agreement between the timing of these events for the MAAP4 benchmark. This is important since this reference sequence represents a set of boundary conditions that is continually with subsequent analyses being perturbations on this type of accident sequence. The good agreement between MAAP4 and
Comparison between KARBUS and APOLLO 1
International Nuclear Information System (INIS)
Payer, L.; Broeders, C.
1995-01-01
A comparison is made between benchmark calculations by the French APOLLO 1 code and the Karlsruhe KARBUS procedure. Independently these two codes had been developed for transport computations in infinite reactor configurations and for burnup calculations. (orig.)
PFLOTRAN-RepoTREND Source Term Comparison Summary.
Energy Technology Data Exchange (ETDEWEB)
Frederick, Jennifer M
2018-03-01
Code inter-comparison studies are useful exercises to verify and benchmark independently developed software to ensure proper function, especially when the software is used to model high-consequence systems which cannot be physically tested in a fully representative environment. This summary describes the results of the first portion of the code inter-comparison between PFLOTRAN and RepoTREND, which compares the radionuclide source term used in a typical performance assessment.
International Nuclear Information System (INIS)
Jobst, Matthias; Kliem, Soeren; Kozmenkov, Yaroslav; Wilhelm, Polina
2017-02-01
Within the framework of the project an ATHLET-CD input deck for a generic German PWR of type KONVOI has been created. This input deck was applied to the simulation of severe accidents from the accident categories station blackout (SBO) and small-break loss-of-coolant accidents (SBLOCA). The complete accident transient from initial event at full power until the damage of reactor pressure vessel (RPV) is covered and all relevant severe accident phenomena are modelled: start of core heat up, fission product release, melting of fuel and absorber material, oxidation and release of hydrogen, relocation of molten material inside the core, relocation to the lower plenum, damage and failure of the RPV. The model has been applied to the analysis of preventive and mitigative accident management measures for SBO and SBLOCA transients. Therefore, the measures primary side depressurization (PSD), injection to the primary circuit by mobile pumps and for SBLOCA the delayed injection by the cold leg hydro-accumulators have been investigated and the assumptions and start criteria of these measures have been varied. The time evolutions of the transients and time margins for the initiation of additional measures have been assessed. An uncertainty and sensitivity study has been performed for the early phase of one SBO scenario with PSD (until the start of core melt). In addition to that, a code -to-code comparison between ATHLET-CD and the severe accident code MELCOR has been carried out.
Measuring Modularity in Open Source Code Bases
Directory of Open Access Journals (Sweden)
Roberto Milev
2009-03-01
Full Text Available Modularity of an open source software code base has been associated with growth of the software development community, the incentives for voluntary code contribution, and a reduction in the number of users who take code without contributing back to the community. As a theoretical construct, modularity links OSS to other domains of research, including organization theory, the economics of industry structure, and new product development. However, measuring the modularity of an OSS design has proven difficult, especially for large and complex systems. In this article, we describe some preliminary results of recent research at Carleton University that examines the evolving modularity of large-scale software systems. We describe a measurement method and a new modularity metric for comparing code bases of different size, introduce an open source toolkit that implements this method and metric, and provide an analysis of the evolution of the Apache Tomcat application server as an illustrative example of the insights gained from this approach. Although these results are preliminary, they open the door to further cross-discipline research that quantitatively links the concerns of business managers, entrepreneurs, policy-makers, and open source software developers.
Santoso, S. E.; Sulistiono, D.; Mawardi, A. F.
2017-11-01
FAA code for airport design has been broadly used by Indonesian Ministry of Aviation since decades ago. However, there is not much comprehensive study about its relevance and efficiency towards current situation in Indonesia. Therefore, a further comparison study on flexible pavement design for airport runway using comparable method has become essential. The main focus of this study is to compare which method between FAA and LCN that offer the most efficient and effective way in runway pavement planning. The comparative methods in this study mainly use the variety of variable approach. FAA code for instance, will use the approach on the aircraft’s maximum take-off weight and annual departure. Whilst LCN code use the variable of equivalent single wheel load and tire pressure. Based on the variables mentioned above, a further classification and rated method will be used to determine which code is best implemented. According to the analysis, it is clear that FAA method is the most effective way to plan runway design in Indonesia with consecutively total pavement thickness of 127cm and LCN method total pavement thickness of 70cm. Although, FAA total pavement is thicker that LCN its relevance towards sustainable and pristine condition in the future has become an essential aspect to consider in design and planning.
High-Speed Turbo-TCM-Coded Orthogonal Frequency-Division Multiplexing Ultra-Wideband Systems
Directory of Open Access Journals (Sweden)
Wang Yanxia
2006-01-01
Full Text Available One of the UWB proposals in the IEEE P802.15 WPAN project is to use a multiband orthogonal frequency-division multiplexing (OFDM system and punctured convolutional codes for UWB channels supporting a data rate up to 480 Mbps. In this paper, we improve the proposed system using turbo TCM with QAM constellation for higher data rate transmission. We construct a punctured parity-concatenated trellis codes, in which a TCM code is used as the inner code and a simple parity-check code is employed as the outer code. The result shows that the system can offer a much higher spectral efficiency, for example, 1.2 Gbps, which is 2.5 times higher than the proposed system. We identify several essential requirements to achieve the high rate transmission, for example, frequency and time diversity and multilevel error protection. Results are confirmed by density evolution.
Evaluation of an electrocardiogram on QR code.
Nakayama, Masaharu; Shimokawa, Hiroaki
2013-01-01
An electrocardiogram (ECG) is an indispensable tool to diagnose cardiac diseases, such as ischemic heart disease, myocarditis, arrhythmia, and cardiomyopathy. Since ECG patterns vary depend on patient status, it is also used to monitor patients during treatment and comparison with ECGs with previous results is important for accurate diagnosis. However, the comparison requires connection to ECG data server in a hospital and the availability of data connection among hospitals is limited. To improve the portability and availability of ECG data regardless of server connection, we here introduce conversion of ECG data into 2D barcodes as text data and decode of the QR code for drawing ECG with Google Chart API. Fourteen cardiologists and six general physicians evaluated the system using iPhone and iPad. Overall, they were satisfied with the system in usability and accuracy of decoded ECG compared to the original ECG. This new coding system may be useful in utilizing ECG data irrespective of server connections.
Optics code development at Los Alamos
International Nuclear Information System (INIS)
Mottershead, C.T.; Lysenko, W.P.
1988-01-01
This paper is an overview of part of the beam optics code development effort in the Accelerator Technology Division at Los Alamos National Laboratory. The aim of this effort is to improve our capability to design advanced beam optics systems. The work reported is being carried out by a collaboration of permanent staff members, visiting consultants, and student research assistants. The main components of the effort are: building a new framework of common supporting utilities and software tools to facilitate further development; research and development on basic computational techniques in classical mechanics and electrodynamics; and evaluation and comparison of existing beam optics codes, and support for their continuing development. 17 refs
Optics code development at Los Alamos
International Nuclear Information System (INIS)
Mottershead, C.T.; Lysenko, W.P.
1988-01-01
This paper is an overview of part of the beam optics code development effort in the Accelerator Technology Division at Los Alamos National Laboratory. The aim of this effort is to improve our capability to design advanced beam optics systems. The work reported is being carried out by a collaboration of permanent staff members, visiting consultants, and student research assistants. The main components of the effort are building a new framework of common supporting utilities and software tools to facilitate further development. research and development on basic computational techniques in classical mechanics and electrodynamics, and evaluation and comparison of existing beam optics codes, and support for their continuing development
Tsopra, Rosy; Peckham, Daniel; Beirne, Paul; Rodger, Kirsty; Callister, Matthew; White, Helen; Jais, Jean-Philippe; Ghosh, Dipansu; Whitaker, Paul; Clifton, Ian J; Wyatt, Jeremy C
2018-07-01
Coding of diagnoses is important for patient care, hospital management and research. However coding accuracy is often poor and may reflect methods of coding. This study investigates the impact of three alternative coding methods on the inaccuracy of diagnosis codes and hospital reimbursement. Comparisons of coding inaccuracy were made between a list of coded diagnoses obtained by a coder using (i)the discharge summary alone, (ii)case notes and discharge summary, and (iii)discharge summary with the addition of medical input. For each method, inaccuracy was determined for the primary, secondary diagnoses, Healthcare Resource Group (HRG) and estimated hospital reimbursement. These data were then compared with a gold standard derived by a consultant and coder. 107 consecutive patient discharges were analysed. Inaccuracy of diagnosis codes was highest when a coder used the discharge summary alone, and decreased significantly when the coder used the case notes (70% vs 58% respectively, p coded from the discharge summary with medical support (70% vs 60% respectively, p coding with case notes, and 35% for coding with medical support. The three coding methods resulted in an annual estimated loss of hospital remuneration of between £1.8 M and £16.5 M. The accuracy of diagnosis codes and percentage of correct HRGs improved when coders used either case notes or medical support in addition to the discharge summary. Further emphasis needs to be placed on improving the standard of information recorded in discharge summaries. Copyright © 2018 Elsevier B.V. All rights reserved.
Wavelet subband coding of computer simulation output using the A++ array class library
Energy Technology Data Exchange (ETDEWEB)
Bradley, J.N.; Brislawn, C.M.; Quinlan, D.J.; Zhang, H.D. [Los Alamos National Lab., NM (United States); Nuri, V. [Washington State Univ., Pullman, WA (United States). School of EECS
1995-07-01
The goal of the project is to produce utility software for off-line compression of existing data and library code that can be called from a simulation program for on-line compression of data dumps as the simulation proceeds. Naturally, we would like the amount of CPU time required by the compression algorithm to be small in comparison to the requirements of typical simulation codes. We also want the algorithm to accomodate a wide variety of smooth, multidimensional data types. For these reasons, the subband vector quantization (VQ) approach employed in has been replaced by a scalar quantization (SQ) strategy using a bank of almost-uniform scalar subband quantizers in a scheme similar to that used in the FBI fingerprint image compression standard. This eliminates the considerable computational burdens of training VQ codebooks for each new type of data and performing nearest-vector searches to encode the data. The comparison of subband VQ and SQ algorithms in indicated that, in practice, there is relatively little additional gain from using vector as opposed to scalar quantization on DWT subbands, even when the source imagery is from a very homogeneous population, and our subjective experience with synthetic computer-generated data supports this stance. It appears that a careful study is needed of the tradeoffs involved in selecting scalar vs. vector subband quantization, but such an analysis is beyond the scope of this paper. Our present work is focused on the problem of generating wavelet transform/scalar quantization (WSQ) implementations that can be ported easily between different hardware environments. This is an extremely important consideration given the great profusion of different high-performance computing architectures available, the high cost associated with learning how to map algorithms effectively onto a new architecture, and the rapid rate of evolution in the world of high-performance computing.
Los Alamos radiation transport code system on desktop computing platforms
International Nuclear Information System (INIS)
Briesmeister, J.F.; Brinkley, F.W.; Clark, B.A.; West, J.T.
1990-01-01
The Los Alamos Radiation Transport Code System (LARTCS) consists of state-of-the-art Monte Carlo and discrete ordinates transport codes and data libraries. These codes were originally developed many years ago and have undergone continual improvement. With a large initial effort and continued vigilance, the codes are easily portable from one type of hardware to another. The performance of scientific work-stations (SWS) has evolved to the point that such platforms can be used routinely to perform sophisticated radiation transport calculations. As the personal computer (PC) performance approaches that of the SWS, the hardware options for desk-top radiation transport calculations expands considerably. The current status of the radiation transport codes within the LARTCS is described: MCNP, SABRINA, LAHET, ONEDANT, TWODANT, TWOHEX, and ONELD. Specifically, the authors discuss hardware systems on which the codes run and present code performance comparisons for various machines
Tao, Yimin; Lyu, Ming-Ju Amy; Zhu, Xin-Guang
2016-05-01
C4 photosynthesis evolved independently from C3 photosynthesis in more than 60 lineages. Most of the C4 lineages are clustered together in the order Poales and the order Caryophyllales while many other angiosperm orders do not have C4 species, suggesting the existence of biological pre-conditions in the ancestral C3 species that facilitate the evolution of C4 photosynthesis in these lineages. To explore pre-adaptations for C4 photosynthesis evolution, we classified C4 lineages into the C4-poor and the C4-rich groups based on the percentage of C4 species in different genera and conducted a comprehensive comparison on the transcriptomic changes between the non-C4 species from the C4-poor and the C4-rich groups. Results show that species in the C4-rich group showed higher expression of genes related to oxidoreductase activity, light reaction components, terpene synthesis, secondary cell synthesis, C4 cycle related genes and genes related to nucleotide metabolism and senescence. In contrast, C4-poor group showed up-regulation of a PEP/Pi translocator, genes related to signaling pathway, stress response, defense response and plant hormone metabolism (ethylene and brassinosteroid). The implications of these transcriptomic differences between the C4-rich and C4-poor groups to C4 evolution are discussed.
Structure and operation of the ITS code system
International Nuclear Information System (INIS)
Halbleib, J.
1988-01-01
The TIGER series of time-independent coupled electron-photon Monte Carlo transport codes is a group of multimaterial and multidimensional codes designed to provide a state-of-the-art description of the production and transport of the electron-photon cascade by combining microscopic photon transport with a macroscopic random walk for electron transport. Major contributors to its evolution are listed. The author and his associates are primarily code users rather than code developers, and have borrowed freely from existing work wherever possible. Nevertheless, their efforts have resulted in various software packages for describing the production and transport of the electron-photon cascade that they found sufficiently useful to warrant dissemination through the Radiation Shielding Information Center (RSIC) at Oak Ridge National Laboratory. The ITS system (Integrated TIGER Series) represents the organization and integration of this combined software, along with much additional capability from previously unreleased work, into a single convenient package of exceptional user friendliness and portability. Emphasis is on simplicity and flexibility of application without sacrificing the rigor or sophistication of the physical model
Validation of CESAR Thermal-hydraulic Module of ASTEC V1.2 Code on BETHSY Experiments
Tregoures, Nicolas; Bandini, Giacomino; Foucher, Laurent; Fleurot, Joëlle; Meloni, Paride
The ASTEC V1 system code is being jointly developed by the French Institut de Radioprotection et Sûreté Nucléaire (IRSN) and the German Gesellschaft für Anlagen und ReaktorSicherheit (GRS) to address severe accident sequences in a nuclear power plant. Thermal-hydraulics in primary and secondary system is addressed by the CESAR module. The aim of this paper is to present the validation of the CESAR module, from the ASTEC V1.2 version, on the basis of well instrumented and qualified integral experiments carried out in the BETHSY facility (CEA, France), which simulates a French 900 MWe PWR reactor. Three tests have been thoroughly investigated with CESAR: the loss of coolant 9.1b test (OECD ISP N° 27), the loss of feedwater 5.2e test, and the multiple steam generator tube rupture 4.3b test. In the present paper, the results of the code for the three analyzed tests are presented in comparison with the experimental data. The thermal-hydraulic behavior of the BETHSY facility during the transient phase is well reproduced by CESAR: the occurrence of major events and the time evolution of main thermal-hydraulic parameters of both primary and secondary circuits are well predicted.
Cultural evolution as a nonstationary stochastic process
DEFF Research Database (Denmark)
Nicholson, Arwen; Sibani, Paolo
2016-01-01
We present an individual based model of cultural evolution, where interacting agents are coded by binary strings standing for strategies for action, blueprints for products or attitudes and beliefs. The model is patterned on an established model of biological evolution, the Tangled Nature Model...... (TNM), where a “tangle” of interactions between agents determines their reproductive success. In addition, our agents also have the ability to copy part of each other's strategy, a feature inspired by the Axelrod model of cultural diversity. Unlike the latter, but similarly to the TNM, the model...
Landscape Evolution Comparison between Sacra Mensa, Mars and the Grand Mesa, Colorado, USA
Chesnutt, J. M.; Wegmann, K. W.; Cole, R. D.; Byrne, P. K.
2017-12-01
The Grand Mesa in Colorado is one of the largest and highest flat-topped mountains on Earth, and as such provides a compelling analog for Mars' Sacra Mensa. Both basalt-capped landforms are morphologically similar, enabling a landscape evolution comparison between the two that considers key differences in locale, composition, and environmental conditions. Sacra Mensa is nearly 50 times the area of Grand Mesa and towers 3 km above the surrounding area. The 1,300 km2 Grand Mesa rises 2 km above Grand Valley, and is bracketed by the Colorado and Gunnison Rivers in much the same way as Sacra Mensa is bounded by braided channels of Kasei Valles. The sustained incision by the Gunnison and Colorado was a key erosive force in the creation of the Grand Mesa, whereas punctuated but voluminous Hesperian glacio-fluvial floods are thought to have carved the Sacra Mensa. The Grand Mesa is undergoing extensive mass wasting, ranging from deadly landslides like the 2014 West Salt Creek rock avalanche to hundreds of slower-moving retrogressive slump blocks calving off the Miocene basalt cap. The genesis and modification of both landforms includes volcanic and fluvial activity, albeit in an inverted sequence. The Grand Mesa basalt cap has preserved the landform during the incision around its sides, whereas Sacra Mensa was likely carved by floods, with those flood channels later modified by lava flows. Recent (2015-2017) LiDAR surveys revealed massive and possible ancient landslides in many stream valleys and extensive earthflows on all sides of the Grand Mesa. In the case of the Grand Mesa, the large landslides are mainly occurring in one stratigraphic unit. In comparison, the western half of Sacra Mensa contains substantial slumping accompanied by landslides and debris flows, whereas the eastern half has relatively few such phenomena. Here, we report on the first Mesa-Mensa landscape evolution analog study. The surficial and bedrock mapping and 14C dating of key features of the
Hybrid Video Coding Based on Bidimensional Matching Pursuit
Directory of Open Access Journals (Sweden)
Lorenzo Granai
2004-12-01
Full Text Available Hybrid video coding combines together two stages: first, motion estimation and compensation predict each frame from the neighboring frames, then the prediction error is coded, reducing the correlation in the spatial domain. In this work, we focus on the latter stage, presenting a scheme that profits from some of the features introduced by the standard H.264/AVC for motion estimation and replaces the transform in the spatial domain. The prediction error is so coded using the matching pursuit algorithm which decomposes the signal over an appositely designed bidimensional, anisotropic, redundant dictionary. Comparisons are made among the proposed technique, H.264, and a DCT-based coding scheme. Moreover, we introduce fast techniques for atom selection, which exploit the spatial localization of the atoms. An adaptive coding scheme aimed at optimizing the resource allocation is also presented, together with a rate-distortion study for the matching pursuit algorithm. Results show that the proposed scheme outperforms the standard DCT, especially at very low bit rates.
Energy Technology Data Exchange (ETDEWEB)
Caruso, Gianfranco, E-mail: gianfranco.caruso@uniroma1.it [Sapienza University of Rome – DIAEE, Corso Vittorio Emanuele II, 244, 00186 Roma (Italy); Giannetti, Fabio [Sapienza University of Rome – DIAEE, Corso Vittorio Emanuele II, 244, 00186 Roma (Italy); Porfiri, Maria Teresa [ENEA FUS C.R. Frascati, Via Enrico Fermi, 45, 00044 Frascati, Roma (Italy)
2013-12-15
Highlights: • The CONSEN code for thermal-hydraulic transients in fusion plants is introduced. • A magnet induced confinement bypass accident in ITER has been simulated. • A comparison with previous MELCOR results for the accident is presented. -- Abstract: The CONSEN (CONServation of ENergy) code is a fast running code to simulate thermal-hydraulic transients, specifically developed for fusion reactors. In order to demonstrate CONSEN capabilities, the paper deals with the accident analysis of the magnet induced confinement bypass for ITER design 1996. During a plasma pulse, a poloidal field magnet experiences an over-voltage condition or an electrical insulation fault that results in two intense electrical arcs. It is assumed that this event produces two one square meters ruptures, resulting in a pathway that connects the interior of the vacuum vessel to the cryostat air space room. The rupture results also in a break of a single cooling channel within the wall of the vacuum vessel and a breach of the magnet cooling line, causing the blow down of a steam/water mixture in the vacuum vessel and in the cryostat and the release of 4 K helium into the cryostat. In the meantime, all the magnet coils are discharged through the magnet protection system actuation. This postulated event creates the simultaneous failure of two radioactive confinement barrier and it envelopes all type of smaller LOCAs into the cryostat. Ice formation on the cryogenic walls is also involved. The accident has been simulated with the CONSEN code up to 32 h. The accident evolution and the phenomena involved are discussed in the paper and the results are compared with available results obtained using the MELCOR code.
Reinvestigation of moving punctured black holes with a new code
International Nuclear Information System (INIS)
Cao Zhoujian; Yo Hweijang; Yu Juiping
2008-01-01
We report on our code, in which the moving puncture method is applied and an adaptive/fixed mesh refinement is implemented, and on its preliminary performance on black hole simulations. Based on the Baumgarte-Sharpiro-Shibata-Nakamura (BSSN) formulation, up-to-date gauge conditions and the modifications of the formulation are also implemented and tested. In this work, we present our primary results about the simulation of a single static black hole, of a moving single black hole, and of the head-on collision of a binary black hole system. For the static punctured black hole simulations, different modifications of the BSSN formulation are applied. It is demonstrated that both the currently used sets of modifications lead to a stable evolution. For cases of a moving punctured black hole with or without spin, we search for viable gauge conditions and study the effect of spin on the black hole evolution. Our results confirm previous results obtained by other research groups. In addition, we find a new gauge condition, which has not yet been adopted by any other researchers, which can also give stable and accurate black hole evolution calculations. We examine the performance of the code for the head-on collision of a binary black hole system, and the agreement of the gravitational waveform it produces with that obtained in other works. In order to understand qualitatively the influence of matter on the binary black hole collisions, we also investigate the same head-on collision scenarios but perturbed by a scalar field. The numerical simulations performed with this code not only give stable and accurate results that are consistent with the works by other numerical relativity groups, but also lead to the discovery of a new viable gauge condition, as well as clarify some ambiguities in the modification of the BSSN formulation. These results demonstrate that this code is reliable and ready to be used in the study of more realistic astrophysical scenarios and of numerical
Application of data analysis techniques to nuclear reactor systems code to accuracy assessment
International Nuclear Information System (INIS)
Kunz, R.F.; Kasmala, G.F.; Murray, C.J.; Mahaffy, J.H.
2000-01-01
An automated code assessment program (ACAP) has been developed by the authors to provide quantitative comparisons between nuclear reactor systems (NRS) code results and experimental measurements. This software was developed under subcontract to the United States Nuclear Regulatory Commission for use in its NRS code consolidation efforts. In this paper, background on the topic of NRS accuracy and uncertainty assessment is provided which motivates the development of and defines basic software requirements for ACAP. A survey of data analysis techniques was performed, focusing on the applicability of methods in the construction of NRS code-data comparison measures. The results of this review process, which further defined the scope, user interface and process for using ACAP are also summarized. A description of the software package and several sample applications to NRS data sets are provided. Its functionality and ability to provide objective accuracy assessment figures are demonstrated. (author)
A Unique Perspective on Data Coding and Decoding
Directory of Open Access Journals (Sweden)
Wen-Yan Wang
2010-12-01
Full Text Available The concept of a loss-less data compression coding method is proposed, and a detailed description of each of its steps follows. Using the Calgary Corpus and Wikipedia data as the experimental samples and compared with existing algorithms, like PAQ or PPMstr, the new coding method could not only compress the source data, but also further re-compress the data produced by the other compression algorithms. The final files are smaller, and by comparison with the original compression ratio, at least 1% redundancy could be eliminated. The new method is simple and easy to realize. Its theoretical foundation is currently under study. The corresponding Matlab source code is provided in the Appendix.
Comparison of two LES codes for wind turbine wake studies
DEFF Research Database (Denmark)
Chivaee, Hamid Sarlak; Pierella, F.; Mikkelsen, Robert Flemming
2014-01-01
of this paper is to investigate on two CFD solvers, the DTU's in-house code, EllipSys3D and the open-sourse toolbox, OpenFoam, for a set of actuator line based LES computations. Two types of simulations are performed: the wake behind a signle rotor and the wake behind a cluster of three inline rotors. Results...... are compared in terms of velocity deficit, turbulence kinetic energy and eddy viscosity. It is seen that both codes predict similar near-wake flow structures with the exception of OpenFoam's simulations without the subgrid-scale model. The differences begin to increase with increasing the distance from...... of the wake structures and more homogenuous flow structures. It is finally observed that OpenFoam computations are more sensitive to the SGS models....
Energy Technology Data Exchange (ETDEWEB)
Michel-Sendis, F
2006-12-15
If nuclear power is to provide a significant fraction of the growing world energy demand, only through the breeding concept can the development of sustainable nuclear energy become a reality. The study of such a transition, from present-day nuclear technologies to future breeding concepts is therefore pertinent. Among these future concepts, those using the thorium cycle Th/U-233 in a thermal neutron spectrum are of particular interest; molten-salt type thermal reactors would allow for breeding while requiring comparatively low initial inventories of U-233. The upstream production of U-233 can be obtained through the use of thorium-plutonium mixed oxide fuel in present-day light water reactors. This work presents, firstly, the development of the MURE evolution code system, a C++ object-oriented code that allows the study, through Monte Carlo (M.C.) simulation, of nuclear reactors and the evolution of their fuel under neutron irradiation. The M.C. methods are well-suited for the study of any reactor, whether it'd be an existing reactor using a new kind of fuel or a future concept altogether, the simulation is only dependent on nuclear data. Exact and complex geometries can be simulated and continuous energy particle transport is performed. MURE is an interface with MCNP, the well-known and validated transport code, that allows, among other functionalities, to simulate constant power and constant reactivity evolutions. Secondly, the study of MOX ThPu fuel in a conventional light water reactor (REP) is presented; it explores different plutonium concentrations and isotopic qualities in order to evaluate their safety characteristics. Simulation of their evolution allows us to quantify the production of U-233 at the end of burnup. Last, different french scenarios validating a possible transition towards a park of thermal Th/U-233 breeders, are presented. In these scenarios, U-233 is produced in ThPu moxed light water reactors. (author)
Tectonic evolution of mercury; comparison with the moon
International Nuclear Information System (INIS)
Thomas, P.G.; Masson, P.
1983-01-01
With regard to the Earth or to Mars, the Moon and Mercury look like tectonicless planetary bodies, and the prominent morphologies of these two planets are due to impact and volcanic processes. Despite these morphologies, several types of tectonic activities may be shown. Statistical studies of lineaments direction indicate that Mercury, as well as the Moon, have a planet wide lineament pattern, known as a ''grid''. Statistical studies of Mercury scarps and the Moon grabens indicate an interaction between planetary lithospheric evolution and large impact basins. Detailed studies of the largest basins indicate specific tectonic motions directly or indirectly related to impacts. These three tectonic types have been compared on each planet. The first tectonic type seems to be identical for Mercury and the Moon. But the two other types seem to be different, and are consistent with the planets' thermal evolution
The Causality of Evolution on Different Fitness Landscapes
Vyawahare, Saurabh; Austin, Robert; Zhang, Qiucen; Kim, Hyunsung; Bestoso, John
2013-03-01
Evolution of antibiotic resistance is a growing problem. One major reason why most antibiotics fail is because of mutations on drug targets (e.g. essential enzymes). Sequencing of clinically resistant isolates have shown that multiple mutational-hotspots exist in coding regions, which could potentially prohibit the binding of drugs. However, it is not clear whether the appearance of each mutation is random or influenced by other factors. In this paper, we compare evolution of resistance to ciprofloxacin from two distinct but well characterized genetic backgrounds. By combining our recently developed evolution reactor and deep whole-genome sequencing, we show different alleles of σs factor lead to fixation of different mutations in gyrA gene that confer ciprofloxacin resistance to bacteria Escherichia coli. Such causality of evolution in different genes provides an opportunity to control the evolution of antibiotic resistance. Sponsored by the NCI/NIH Physical Sciences Oncology Centers
Extension of the code COCOSYS to a dispersion code for smoke and carbon monoxide
International Nuclear Information System (INIS)
Sdouz, Gert; Mayrhofer, Robert
2009-01-01
The code COCOSYS (Containment Code SYStem) was developed by GRS in Germany to simulate processes and nuclear plant states during severe accidents in the containments of light water reactors. It contains several physical models, especially a module for aerosol behaviour. The goal of this work was to extend COCOSYS for applications in more general geometries mainly for complex public buildings. For the application in public buildings models for air condition systems and different boundary conditions according to different environments were developed. The principal application of the extended code COCOSYS is in the area of emergency situations especially in the simulation for carbon monoxide and smoke dispersion. After developing and implementing the new models several test calculations were performed to evaluate the functionality of the extended code. The comparison of the results with those of the original COCOSYS code showed no discrepancies. For the first realistic application several fire emergency scenarios in the Vienna General Hospital (AKH) were selected in agreement with the fire department of the hospital. One of the scenarios addresses the danger of carbon monoxide (CO) and smoke leaking into a fire protection section through a damaged fire protection flap. As a result of the dispersion simulation the CO-concentration in all of the rooms is obtained. Together with additional results as deposition and smoke dispersion the outcome of the simulation can be used for training. Among the next steps are the validation of the new models and the selection of critical scenarios. (author)