Sample records for eurasiatic trifolium species

  1. Structure of anther heads in some Trifolium L. species

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    T. Kazimierski


    Full Text Available The species of the genus Trifolium differ by the number of pollen sacs in stamen heads. Some have only two, other four and in some species there arę two, three or four pollen sacs. The opinion of some authors (Schnarf 1931, Davis 1966 that from this point of view this genus is uniform is wrong. There is some dependence between the chromosome number (2n and the number of pollen sacs. For two species - T. carmeli and T. desvauxii - the chromosome numbers 2n=14 were established for the first time.

  2. Translational genomics from model species Medicago truncatula to crop legume Trifolium pratense

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    Lang Chunting, Chunting


    The legume Trifolium pratense (red clover) is an important fodder crop and produces important secondary metabolites. This makes red clover an interesting species. In this thesis, the red clover genome is compared to the legume model species Medicago truncatula, of which the genome sequence is

  3. Review of the Trifolium amabile Complex in Peru, with the Description of a New Species

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    Eduardo Antonio Molinari-Novoa


    Full Text Available Here, we describe Trifolium absconditum sp. nov., a new species of the T. amabile complex from South America. It differs from other Peruvian Trifolia of the complex by having smaller stipules, leaves, inflorescences, and floral pieces. A key for Peruvian species of the complex is presented, and typifications for them are made when necessary and material is available in Peruvian herbaria. Thus, the number of Peruvian species in the complex is elevated to three: T. amabile, T. absconditum, and a resurrected T. peruvianum. Finally, it is suggested that Chile must be excluded from the distribution of this complex.


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    Attila BARTÓK


    Full Text Available Maramureşului Mountains Nature Park is widely known as one of the last wilderness areas in Europe and also represents a real oasis for naturalists eager to explore the flora and fauna of this special land not very researched. During a botanical trip in the area of Farcău Peak (on 19 July 2014 the authors of this paper found three very rare species (all 3 threatened, included in Romanian Red Book of Vascular Plants: Trifolium lupinaster L., Heracleum carpaticum Porcius and Ranunculus thora L. Based on field studies, analyses of herbarium material and literature data, the authors managed to record the occurrence of Trifolium lupinaster, Heracleum carpaticum and Ranunculus thora in the Romanian Carpathians and determined the threatened status of species according to criteria and categories of IUCN.

  5. Trifolium species - the latest findings on chemical profile, ethnomedicinal use and pharmacological properties. (United States)

    Kolodziejczyk-Czepas, Joanna


    Clovers (Trifolium, Fabaceae) have a long history of use in folk medicine. Furthermore, during last 3 years, a considerable growth in scientific interest in these plants has been observed. This article summarizes and critically reviews an over 3-year progress of knowledge of ethnomedicinal use, phytochemical profile, physiological effects and possible therapeutic action of various clover species. It contains the latest literature (over 80 papers), originated from international databases (MEDLINE/PubMed, Science Direct/Elsevier, Springer Link, Wiley Online Library) and reports from other international and local scientific periodicals. Traditional uses of T. pratense and T. repens have been confirmed, while the folk medicine recommendations for administration of other clovers such as T. burchellianum, T. fragiferum, T. hybridum, T. minus and T. purpureum were reported for the first time. Furthermore, several other clover species were also investigated in terms of their antioxidant, antimicrobial and phytoestrogenic effects for the first time. Only T. alexandrinum, T. pratense and T. medium were examined in animal studies. Besides T. pratense, other clovers may be a rich source of bioactive phytochemicals. However, in contradiction to red clover, the therapeutic use of other clovers is still limited by the lack of in-vivo evidence. © 2016 Royal Pharmaceutical Society.

  6. Evaluation of biological nitrogen at Trifolium pratense, Trifolium repens and Lotus corniculatus, on harvesting cycles

    National Research Council Canada - National Science Library

    Maria-Marcela Razec


    ...% of the total nitrogen fixed of species Trifolium repens. For Trifolium pratense and Lotus corniculatus species, the maximum amount of N fixed is achieved at CII, registering a distribution harvest cycles thus 28% N - CI, 40% N - CII and 32...

  7. Development of Genomic Resources in the Species of Trifolium L. and Its Application in Forage Legume Breeding

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    Leif Skøt


    Full Text Available Clovers (genus Trifolium are a large and widespread genus of legumes. A number of clovers are of agricultural importance as forage crops in grassland agriculture, particularly temperate areas. White clover (Trifolium repens L. is used in grazed pasture and red clover (T. pratense L. is widely cut and conserved as a winter feed. For the diploid red clover, genetic and genomic tools and resources have developed rapidly over the last five years including genetic and physical maps, BAC (bacterial artificial chromosome end sequence and transcriptome sequence information. This has paved the way for the use of genome wide selection and high throughput phenotyping in germplasm development. For the allotetraploid white clover progress has been slower although marker assisted selection is in use and relatively robust genetic maps and QTL (quantitative trait locus information now exist. For both species the sequencing of the model legume Medicago truncatula gene space is an important development to aid genomic, biological and evolutionary studies. The first genetic maps of another species, subterranean clover (Trifolium subterraneum L. have also been published and its comparative genomics with red clover and M. truncatula conducted. Next generation sequencing brings the potential to revolutionize clover genomics, but international consortia and effective use of germplasm, novel population structures and phenomics will be required to carry out effective translation into breeding. Another avenue for clover genomic and genetic improvement is interspecific hybridization. This approach has considerable potential with regard to crop improvement but also opens windows of opportunity for studies of biological and evolutionary processes.

  8. Effects of ozone on inter- and intra-species competition and photosynthesis in mesocosms of Lolium perenne and Trifolium repens

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    Hayes, F. [Centre for Ecology and Hydrology, Environment Centre Wales, Deiniol Road, Bangor, Gwynedd LL57 2UW (United Kingdom)], E-mail:; Mills, G. [Centre for Ecology and Hydrology, Environment Centre Wales, Deiniol Road, Bangor, Gwynedd LL57 2UW (United Kingdom); Ashmore, M. [Environment Department, University of York, Heslington York YO10 5DD (United Kingdom)


    Trifolium repens and Lolium perenne were exposed as both monocultures and two-species mixtures to an episodic rural ozone regime in large, well-watered containers within solardomes for 12 weeks. There were reductions in biomass for T. repens, but not L. perenne, and the proportion of T. repens decreased in ozone-exposed mixtures compared to the control. In addition, leaf biomass of T. repens was maintained at the expense of biomass partitioning to the stolons. The decreased growth corresponded with decreased photosynthetic capacity for T. repens, however, by the end of the exposure there was also decreased photosynthetic capacity of L. perenne, a species previously considered insensitive to ozone. The observed decreases in photosynthetic efficiency and capacity in elevated ozone indicate that the ability of such ubiquitous vegetation to act as a sink for atmospheric carbon may be reduced in future climates. - Ozone causes changes in biomass partitioning, and photosynthetic efficiency and capacity that could decrease the ability of plants to act as a carbon sink.


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    Full Text Available For a term of two years was studied phytoextractive potential of Zn, Cd and Pb using successive culture of alfalfa (Medicago sativa and red clover (Trifolium pratense. In the experimental plot was incorporated a quantity of 20 kg mine waste per square meter, providing in soil 1209 mg Zn/kg d.s., 4.70 mg Cd/kg d.s. and 188.2 mg Pb/kg d.s. The metals content accumulated in plants was determined at the two moments of biomass harvesting, and through balance calculations we could establish the phytoextraction efficiency of the two forage-grasses species. The obtained results indicate that both perennial forage-legumes species have a good phytoextractive capacity and tolerance for Zn and Pb, especially Trifolium pratense specie. By using this species as phytoextractors on soil polluted with 3.76 times more Pb and 4.03 times more Zn, is provided the reduction of metallic ions concentration in soil to limits admitted by laws in a period of 3, respectively, 4 years.

  10. Genetic transformation of western clover (Trifolium occidentale D. E. Coombe.) as a model for functional genomics and transgene introgression in clonal pasture legume species. (United States)

    Richardson, Kim A; Maher, Dorothy A; Jones, Chris S; Bryan, Greg


    Western clover (Trifolium occidentale) is a perennial herb with characteristics compatible for its development as an attractive model species for genomics studies relating to the forage legume, white clover (Trifolium repens). Its characteristics such as a small diploid genome, self-fertility and ancestral contribution of one of the genomes of T. repens, facilitates its use as a model for genetic analysis of plants transformed with legume or novel genes. In this study, a reproducible transformation protocol was established following screening of T. occidentale accessions originating from England, Ireland, France, Spain and Portugal. The protocol is based upon infection of cotyledonary explants dissected from mature seed with the Agrobacterium tumefaciens strain GV3101 carrying vectors which contain the bar selection marker gene. Transformation frequencies of up to 7.5% were achieved in 9 of the 17 accessions tested. Transformed plants were verified by PCR and expression of the gusA reporter gene, while integration of the T-DNA was confirmed by Southern blot hybridisation and segregation of progeny in the T1 generation. Development of this protocol provides a valuable contribution toward establishing T. occidentale as a model species for white clover. This presents opportunities for further improvement in white clover through the application of biotechnology.

  11. Sobre las causas ontogénicas de la productividad diferencial de semillas en la especie anficárpica Trifolium polymorphum (Leguminosae On the causes of the differential seed production in the anficarpic species Trifolium polymorphum (Leguminosae

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    Gabriela Speroni


    Full Text Available Trifolium polymorphum es una leguminosa de pradera con buena adaptación y persistencia en este tipo de vegetación. Combina diferentes estrategias reproductivas como la reproducción vegetativa por estolones y la reproducción por semillas producidas en dos tipos de frutos y flores, subterráneas y aéreas. Las subterráneas son cleistógamas y las aéreas son casmógamas. Empíricamente se ha detectado mayor formación de semillas en los frutos subterráneos que en los aéreos. En el presente trabajo se realizan estudios embriológicos y de desarrollo de semillas en ambos tipos de flores para dilucidar si existen causas ontogenéticas que determinan la productividad diferencial de semillas en ambos tipos de frutos. No se detectaron causas embriológicas pre-cigóticas que expliquen el menor número de semillas en los frutos de las flores aéreas. Ambos tipos de semillas comparten características ontogenéticas y presentan apropiado desarrollo de los óvulos, sacos embrionarios y establecimiento de vías nutricionales para saco embrionario, embrión y endosperma. En general las floraciones insumen un costo energético importante para las especies vegetales. La floración aérea de T. polymorphum, aunque sometida a una fuerte presión de herbivoría del ganado, incorpora variabilidad genética a sus poblaciones a través de la polinización cruzada y permite la dispersión a distancia.Trifolium polymorphum is recognized as one of the best adapted legume in field conditions. It combines different reproductive strategies such as stoloniferous vegetative reproduction and seed reproduction by two types of fruits produced in underground and aerial flowers. These last ones are chasmogamous and underground flowers are cleistogamous. A higher seed production has empirically been detected in underground flowers rather than in aerial ones. In the present work, embryological studies in aerial and underground flowers were carried out in order to determine

  12. The response of Trifolium africanum (Ser.) var. glabellum and ...

    African Journals Online (AJOL)

    The results of a glasshouse trial show that Trifolium africanum var. glabellum has considerable potential for use in radical veld improvement. Trifolium africanum outyielded T. repens cv. Ladino in acid, P fixing soils (Farningham series). Both species produced significantly higher yields on Longlands than on Farningham soil ...

  13. Cyanotypic frequencies in adjacent and mixed populations of Trifolium occidentale Coombe and Trifolium repens L. are regulated by different mechanisms.

    NARCIS (Netherlands)

    Kakes, P.; Chardonnens, A.N.


    The cyanogenic polymorphism in Trifolium repens is caused by the variation in two genes, the interaction of which produces four distinct cyanotypes. Along the Atlantic coasts of Bretagne, T. repens is sometimes found in populations mixed with the related species Trifolium occidentale, although the

  14. Analysis of rhizobial endosymbionts of Vicia, Lathyrus and Trifolium species used to maintain mountain firewalls in Sierra Nevada National Park (South Spain). (United States)

    Villadas, Pablo J; Lasa, Ana V; Martínez-Hidalgo, Pilar; Flores-Félix, José David; Martínez-Molina, Eustoquio; Toro, Nicolás; Velázquez, Encarna; Fernández-López, Manuel


    Forest fires lead to the annual disappearance of many natural formations that require the creation of firewall areas. They can be maintained by enriching their pastures with attractive plants for grazing livestock, mainly legumes, which have a high protein content and low dependence on N fertilizers due to their ability to establish nitrogen-fixing symbiosis with rhizobia. In this study, the rhizobia isolated from the nodules of six legumes from the genera Vicia, Lathyrus and Trifolium were analysed in a firewall zone established in Lanjarón (Granada) close to the Sierra Nevada National Park (Spain). The results showed a high genetic diversity of the isolated strains that had 3, 16, 14 and 13 different types of rrs, recA, atpD and glnII genes, respectively. All strains were phylogenetically close to the species from the Rhizobium leguminosarum group, although they were not identified as any of them. The isolated strains belonged to the symbiovars viciae and trifolii but high phylogenetic diversity was found within both symbiovars, since there were 16 and 14 nodC gene types, respectively. Some of these strains clustered with strains isolated in other countries and continents, but others formed atpD, recA, glnII and nodC clusters and lineages only found to date in this study. Copyright © 2016 Elsevier GmbH. All rights reserved.

  15. Arrowleaf Clover (Trifolium vesiculosum Savi: A New Species of Annual Legumes for High Rainfall Areas of the Mediterranean Climate Zone of Chile Trébol Vesiculoso (Trifolium vesiculosum Savi: Una Nueva Especie de Leguminosa Anual para Áreas de Alta Precipitación en la Zona Mediterránea de Chile

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    Carlos Ovalle M


    Full Text Available The present review examines the main attributes and agronomic characteristics of arrowleaf clover (Trifolium vesiculosum Savi and its incorporation into production systems in dryland areas of the Andean foothills of the humid Mediterranean climate zone of Chile. It is a new species of annual legume in Chile for light and medium textured soils. The root system can reach a depth of 1.5 m and its seeds have a high percentage of hardseedness (99.8%. It is an upright plant, with purplish-white flowers. The mature plant has large arrow-shaped leaves up to 50 mm long, often marked with a large white “V”. Dry matter and seed production in the Andean foothills is high (3.9-8.8 t DM ha-1 and 700-900 kg ha-1, respectively, surpassing the productivity of sub clover (Trifolium subterraneum L. cv. Mount Barker and crimson clover (Trifolium incarnatum L.. However, DM production in the second year was lower, possibly because the high percentage of hardseedness inhibited plant emergence. The phenological records and productive performance suggest that arrowleaf clover could contribute to improving pastoral production in dryland areas with annual rainfall levels of more than 800 mm, such as the Andean foothills in the central-southern region of Chile.En la presente revisión se examinan los principales atributos y características agronómicas del trébol vesiculoso (Trifolium vesiculosum Savi y su eventual incorporación a sistemas de producción en la precordillera andina de la zona de clima mediterráneo húmedo de Chile. Se trata de una nueva especie de leguminosa forrajera anual para suelos de textura liviana y media. El sistema radical puede alcanzar 1,5 m de profundidad y las semillas tienen un alto porcentaje de dureza seminal (99,8%. Es una planta de crecimiento erecto, flores de color blanco con una leve coloración púrpura. Las plantas adultas tienen grandes hojas con forma de flecha de más de 50 mm de largo, a menudo muestran una marca blanca en

  16. Is there sufficient Ensifer and Rhizobium species diversity in UK farmland soils to support red clover (Trifolium pratense), white clover (T. repens), lucerne (Medicago sativa) and black medic (M. lupulina)? (United States)

    Roberts, Rachel; Jackson, Robert W; Mauchline, Tim H; Hirsch, Penny R; Shaw, Liz J; Döring, Thomas F; Jones, Hannah E


    Rhizobia play important roles in agriculture owing to their ability to fix nitrogen through a symbiosis with legumes. The specificity of rhizobia-legume associations means that underused legume species may depend on seed inoculation with their rhizobial partners. For black medic (Medicago lupulina) and lucerne (Medicago sativa) little is known about the natural prevalence of their rhizobial partner Ensifer meliloti in UK soils, so that the need for inoculating them is unclear. We analysed the site-dependence of rhizobial seed inoculation effects on the subsequent ability of rhizobial communities to form symbioses with four legume species (Medicago lupulina, M. sativa, Trifolium repens and T. pratense). At ten organic farms across the UK, a species-diverse legume based mixture (LBM) which included these four species was grown. The LBM seed was inoculated with a mix of commercial inocula specific for clover and lucerne. At each site, soil from the LBM treatment was compared to the soil sampled prior to the sowing of the LBM (the control). From each site and each of the two treatments, a suspension of soils was applied to seedlings of the four legume species and grown in axenic conditions for six weeks. Root nodules were counted and their rhizobia isolated. PCR and sequencing of a fragment of the gyrB gene from rhizobial isolates allowed identification of strains. The number of nodules on each of the four legume species was significantly increased when inoculated with soil from the LBM treatment compared to the control. Both the proportion of plants forming nodules and the number of nodules formed varied significantly by site, with sites significantly affecting the Medicago species but not the Trifolium species. These differences in nodulation were broadly reflected in plant biomass where site and treatment interacted; at some sites there was a significant advantage from inoculation with the commercial inoculum but not at others. In particular, this study has

  17. Molecular phylogeny and evolutionary history of the Eurasiatic orchid genus Himantoglossum s.l. (Orchidaceae). (United States)

    Sramkó, Gábor; Attila, Molnár V; Hawkins, Julie A; Bateman, Richard M


    Lizard orchids of the genus Himantoglossum include many of Eurasia's most spectacular orchids, producing substantial spikes of showy flowers. However, until recently the genus had received only limited, and entirely traditional, systematic study. The aim of the current work was to provide a more robust molecular phylogeny in order to better understand the evolutionary relationships among species of particular conservation concern. All putative species of Himantoglossum s.l. were sampled across its geographical range. A large subsample of the 153 populations studied contributed to an initial survey of nuclear ribosomal internal transcribed spacer (nrITS) ribotypes. Smaller subsets were then sequenced for four plastid regions and the first intron of the low-copy-number nuclear gene LEAFY. Rooted using Steveniella as outgroup, phylogenetic trees were generated using parsimony and Bayesian methods from each of the three datasets, supplemented with a ribotype network. The resulting trees collectively determined the order of branching of the early divergent taxa as Himantoglossum comperianum > H. robertianum group > H. formosum, events that also involved significant morphological divergence. Relaxed molecular clock dating suggested that these divergences preceded the Pleistocene glaciations (the origin of the H. robertianum group may have coincided with the Messinian salinity crisis) and occurred in Asia Minor and/or the Caucasus. Among more controversial taxa of the H. hircinum-jankae clade, which are only subtly morphologically divergent, topological resolution was poorer and topological incongruence between datasets was consequently greater. Plastid sequence divergence is broadly consistent with prior, morphologically circumscribed taxa and indicates a division between H. hircinum-adriaticum to the west of the Carpathians and H. jankae-caprinum (plus local endemics) to the east, a distinction also suggested by nrITS ribotypes. LEAFY phylogenies are less congruent with

  18. Antioxidant Profile of Trifolium pratense L.

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    Heidy Schwartsova


    Full Text Available In order to examine the antioxidant properties of five different extracts of Trifolium pratense L. (Leguminosae leaves, various assays which measure free radical scavenging ability were carried out: 1,1-diphenyl-2-picrylhydrazyl, hydroxyl, superoxide anion and nitric oxide radical scavenger capacity tests and lipid peroxidation assay. In all of the tests, only the H2O and (to some extent the EtOAc extracts showed a potent antioxidant effect compared with BHT and BHA, well-known synthetic antioxidants. In addition, in vivo experiments were conducted with antioxidant systems (activities of GSHPx, GSHR, Px, CAT, XOD, GSH content and intensity of LPx in liver homogenate and blood of mice after their treatment with extracts of T. pratense leaves, or in combination with CCl4. Besides, in the extracts examined the total phenolic and flavonoid amounts were also determined, together with presence of the selected flavonoids: quercetin, luteolin, apigenin, naringenin and kaempferol, which were studied using a HPLC-DAD technique. HPLC-DAD analysis showed a noticeable content of natural products according to which the examined Trifolium pratense species could well be regarded as a promising new source of bioactive natural compounds, which can be used both as a food supplement and a remedy.

  19. Dalsze studia cyto-embriologiczne di-, tetra- i oktoploidaluych form Trifolium [Further cyto-embryological studies on di, tetra- and octoploid forms of Trifolium

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    K. Bijok


    Full Text Available In the course of this study no significant differences in the length of pollen-tubes of ecological types collected from natural stations (Trifolium pratense L. var. spontaneum Willk., T. hybridum L. and T. repens L, were found as compared with their polyploid forms obtained in the experimental way. Disorders in fertilization, decay of unfertilized embryo sacs, and degeneration of embroys were observed more frequently on a percentage basis in the polyploid forms. Embryo and endosperm development were similar in the initial species and in the experimentally obtained polyploids.

  20. Effects of forest management on running buffalo clover (Trifolium stoloniferum Muhl. Ex A. Eaton) distribution and abundance in the Fernow Experimental Forest (United States)

    J.Q. Burkhart; J.R. Rentch; T.M. Schuler


    Identifying habitat preferences of species of concern is fundamental to the practice of conservation, but disturbances and other environmental processes can substantially affect suitability. Trifolium stoloniferum, or running buffalo clover, is a federally endangered plant species that occurs on the Fernow Experimental Forest in West Virginia....

  1. Plant relations in mixtures of Trifolium subterraneum cv MT Barker ...

    African Journals Online (AJOL)

    The interaction between Trifolium subterraneum cv MT Barker and Lolium multiflorum cv Midmar was measured in a field trial in terms of dry matter production, crude protein content and crude protein production. The treatments included five different seeding rates of the grass component, four rates of nitrogen application ...

  2. Extraction of isoflavone malonylglucosides from Trifolium pratense L

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    Toebes, A.H.; de Boer, V.; Verkleij, J.A.; Lingeman, H.; Ernst, W.H.


    Extraction of isoflavone malonylglucosides from red clover (Trifolium pratense L.) is a complicated procedure. This is due to the relatively unstable character of the thermolabile glucoside malonates as well as by action of native β-glucosidases, resulting in a rapid degradation of malonylated

  3. Nodulation potential of four Trifolium repens cultivars under field ...

    African Journals Online (AJOL)

    Four Trifolium repens (white clover) cultivars were evaluated under field conditions to determine the potential of these cultivars to sucessfully develop Rhizobium-associated root nodules. Nodulation of T. repens is often poor, because of suboptimal environmental conditions or absence of host-specific rhizobia. The cultivars ...

  4. Forage yield of berseem ( Trifolium alaxandrium ) as affected by ...

    African Journals Online (AJOL)

    This research was conducted with the aim to quantify the effect of phosphorus and potassium fertilization on forage yield of berseem (Trifolium alaxandrium). The experiment was carried out at the Research Farm of Khyber Pakhtunkhwa, Agricultural University Peshawar, Pakistan during the cropping season of 2004 to 2005 ...

  5. Genetic variation of white clover (Trifolium repens L.) collections ...

    African Journals Online (AJOL)



    May 24, 2010 ... Genetic variability of forage grass cultivars: A comparison of Festuca pratensis Huds., Lolium perenne L. and Dactylis glomerata L. Euphytica, 106: 261-270. Kölliker R, Jones ES, Jahufer MZZ, Forster (2001). Bulked AFLP analysis for the assessment of genetic diversity in white clover. (Trifolium repens L).

  6. Salt tolerance in red clover (Trifolium pratense L.) seedlings

    African Journals Online (AJOL)



    Aug 15, 2011 ... This study was conducted to investigate the effect of salt stress on germination of 28 red clover. (Trifolium pratense L.) populations collected from Black Sea Region of Turkey. Seeds were germinated in 0, 60, 120, 180 and 240 mM NaCl concentration. Germination percentage (%), mean germination time.

  7. Extraction and purification of formonometin from Trifolium pratense L ...

    African Journals Online (AJOL)

    Extraction and purification of formonometin from Trifolium pratense L: Physicochemical properties of its complex with ... been limited by the poor solubility in water. Solubility is essential in the oral bio-availability of functional food ... A copper testing stub was used as the carrier of the samples. A layer of gold was sputtered on.

  8. Salt tolerance in red clover ( Trifolium pratense L.) seedlings | Asci ...

    African Journals Online (AJOL)

    This study was conducted to investigate the effect of salt stress on germination of 28 red clover (Trifolium pratense L.) populations collected from Black Sea Region of Turkey. Seeds were germinated in 0, 60, 120, 180 and 240 mM NaCl concentration. Germination percentage (%), mean germination time (MGT), promptness ...

  9. Genome sequence of Rhizobium leguminosarum bv trifolii strain WSM1689, the microsymbiont of the one flowered clover Trifolium uniflorum (United States)

    Terpolilli, Jason; Rui, Tian; Yates, Ron; Howieson, John; Poole, Philip; Munk, Christine; Tapia, Roxanne; Han, Cliff; Markowitz, Victor; Tatiparthi, Reddy; Mavrommatis, Konstantinos; Ivanova, Natalia; Pati, Amrita; Goodwin, Lynne; Woyke, Tanja; Kyrpides, Nikos; Reeve, Wayne


    Rhizobium leguminosarum bv. trifolii is a soil-inhabiting bacterium that has the capacity to be an effective N2-fixing microsymbiont of Trifolium (clover) species. R. leguminosarum bv. trifolii strain WSM1689 is an aerobic, motile, Gram-negative, non-spore-forming rod that was isolated from a root nodule of Trifolium uniflorum collected on the edge of a valley 6 km from Eggares on the Greek Island of Naxos. Although WSM1689 is capable of highly effective N2-fixation with T. uniflorum, it is either unable to nodulate or unable to fix N2 with a wide range of both perennial and annual clovers originating from Europe, North America and Africa. WSM1689 therefore possesses a very narrow host range for effective N2 fixation and can thus play a valuable role in determining the geographic and phenological barriers to symbiotic performance in the genus Trifolium. Here we describe the features of R. leguminosarum bv. trifolii strain WSM1689, together with the complete genome sequence and its annotation. The 6,903,379 bp genome contains 6,709 protein-coding genes and 89 RNA-only encoding genes. This multipartite genome contains six distinct replicons; a chromosome of size 4,854,518 bp and five plasmids of size 667,306, 518,052, 341,391, 262,704 and 259,408 bp. This rhizobial genome is one of 20 sequenced as part of a DOE Joint Genome Institute 2010 Community Sequencing Program. PMID:25197438

  10. Is Recurving an Effective Strategy of Trifolium repens L. to Augment Reproduction?

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    Mustaqeem Ahmad


    Full Text Available Flowers of Trifolium repens L. show recurving. We, therefore, studied whether this is an effective strategy employed by the species to augment reproduction. For this, fifty plants of the species were tagged and monitored. This included twenty control and twenty constrained to recurve. The remaining 10 plants were covered with a net to limit cross-pollination. Daily observations on the plants were recorded. No significant difference in the number of flowers per inflorescence between control and constrained plants was found. However, a significant difference (p0.05, were produced in the control plants. No seeds were produced in the flowers that were netted. Thus, recurving appears to help T. repens in reproduction.

  11. Behavior of Trifolium repens and Lolium perenne growing in a heavy metal contaminated field: Plant metal concentration and phytotoxicity

    Energy Technology Data Exchange (ETDEWEB)

    Bidar, G. [Laboratoire Sols et Environnement, Institut Superieur d' Agriculture, 48 Boulevard Vauban, 59046 Lille Cedex (France); LCE-EA2598, Toxicologie Industrielle et Environnementale, MREI2, Maison de la Recherche en Environnement Industriel de Dunkerque 2, Universite du Littoral-Cote d' Opale, 189A Avenue Maurice Schumann, 59140 Dunkerque (France); Garcon, G. [LCE-EA2598, Toxicologie Industrielle et Environnementale, MREI2, Maison de la Recherche en Environnement Industriel de Dunkerque 2, Universite du Littoral-Cote d' Opale, 189A Avenue Maurice Schumann, 59140 Dunkerque (France); Pruvot, C. [Laboratoire Sols et Environnement, Institut Superieur d' Agriculture, 48 Boulevard Vauban, 59046 Lille Cedex (France); Dewaele, D. [Centre Commun de Mesures, MREI 1, Universite du Littoral-Cote d' Opale, 145, Avenue Maurice Schumann, 59140 Dunkerque (France); Cazier, F. [Centre Commun de Mesures, MREI 1, Universite du Littoral-Cote d' Opale, 145, Avenue Maurice Schumann, 59140 Dunkerque (France); Douay, F. [Laboratoire Sols et Environnement, Institut Superieur d' Agriculture, 48 Boulevard Vauban, 59046 Lille Cedex (France); Shirali, P. [LCE-EA2598, Toxicologie Industrielle et Environnementale, MREI2, Maison de la Recherche en Environnement Industriel de Dunkerque 2, Universite du Littoral-Cote d' Opale, 189A Avenue Maurice Schumann, 59140 Dunkerque (France)]. E-mail:


    The use of a vegetation cover for the management of heavy metal contaminated soils needs prior investigations on the plant species the best sustainable. In this work, behaviors of Trifolium repens and Lolium perenne, growing in a metal-polluted field located near a closed lead smelter, were investigated through Cd, Pb and Zn-plant metal concentrations and their phytotoxicity. In these plant species, metals were preferentially accumulated in roots than in shoots, as follow: Cd > Zn > Pb. Plant exposure to such metals induced oxidative stress in the considered organs as revealed by the variations in malondialdehyde levels and superoxide dismutase activities. These oxidative changes were closely related to metal levels, plant species and organs. Accordingly, L. perenne seemed to be more affected by metal-induced oxidative stress than T. repens. Taken together, these findings allow us to conclude that both the plant species could be suitable for the phytomanagement of metal-polluted soils. - Usefulness of Trifolium repens and Lolium perenne for the phytomanagement of heavy metal-contaminated soils.

  12. Estimation of extractable protein in botanical fractions of legume and grass species

    DEFF Research Database (Denmark)

    Solati, Zeinab; Jørgensen, Uffe; Eriksen, Jørgen


    a high content of protein with a favourable amino acid composition. The extractable true protein was estimated at two harvest dates in leaf and stem of the legume species white clover (Trifolium repens L.), red clover (Trifolium pratense L.) and lucerne (Medicago sativa L.) and the grass species...

  13. Decreased rates of terpene emissions in Ornithopus compressus L. and Trifolium striatum L. by ozone exposure and nitrogen fertilization. (United States)

    Llusia, Joan; Bermejo-Bermejo, Victoria; Calvete-Sogo, Héctor; Peñuelas, Josep


    Increasing tropospheric ozone (O3) and nitrogen soil availability (N) are two of the main drivers of global change. They both may affect gas exchange, including plant emission of volatiles such as terpenes. We conducted an experiment using open-top chambers to analyze these possible effects on two leguminous species of Mediterranean pastures that are known to have different O3 sensitivity, Ornithopus compressus and Trifolium striatum. O3 exposure and N fertilization did not affect the photosynthetic rates of O. compressus and T. striatum, although O3 tended to induce an increase in the stomatal conductance of both species, especially T. striatum, the most sensitive species. O3 and N soil availability reduced the emission of terpenes in O. compressus and T. striatum. If these responses are confirmed as a general pattern, O3 could affect the competitiveness of these species. Copyright © 2014 Elsevier Ltd. All rights reserved.

  14. The symbiovar trifolii of Rhizobium bangladeshense and Rhizobium aegyptiacum sp. nov. nodulate Trifolium alexandrinum in Egypt. (United States)

    Shamseldin, Abdelaal; Carro, Lorena; Peix, Alvaro; Velázquez, Encarna; Moawad, Hassan; Sadowsky, Michael J


    In the present work we analyzed the taxonomic status of several Rhizobium strains isolated from Trifolium alexandrinum L. nodules in Egypt. The 16S rRNA genes of these strains were identical to those of Rhizobium bangladeshense BLR175(T) and Rhizobium binae BLR195(T). However, the analyses of recA and atpD genes split the strains into two clusters. Cluster II strains are identified as R. bangladeshense with >98% similarity values in both genes. The cluster I strains are phylogenetically related to Rhizobium etli CFN42(T) and R. bangladeshense BLR175(T), but with less than 94% similarity values in recA and atpD genes. DNA-DNA hybridization analysis showed 42% and 48% average relatedness between the strain 1010(T) from cluster I with respect to R. bangladeshense BLR175(T) and R. etli CFN42(T), respectively. Phenotypic characteristics of cluster I strains also differed from those of their closest related Rhizobium species. Analysis of the nodC gene showed that the strains belong to two groups within the symbiovar trifolii which was identified in Egypt linked to the species R. bangladeshense. Based on the genotypic and phenotypic characteristics, the group I strains belong to a new species for which the name Rhizobium aegyptiacum sp. nov. (sv. trifolii) is proposed, with strain 1010(T) being designated as the type strain (= USDA 7124(T)=LMG 29296(T)=CECT 9098(T)). Copyright © 2016 Elsevier GmbH. All rights reserved.

  15. Flavonoid Derivatives from the Aerial Parts of Trifolium trichocephalum M. Bieb. and Their Antioxidant and Cytotoxic Activity

    Directory of Open Access Journals (Sweden)

    Gülin Renda


    Full Text Available Trifolium L. species with a rich isoflavone content have been used as expectorant, analgesic, antiseptic, tonic, and wound-healer in folk medicine. The aim of the study is to evaluate pharmacological properties of the extracts and isolated compounds of T. tricocephalum. Phytochemical investigation of the aerial parts of T. trichocephalum led to the isolation of daidzein, genistein, quercetin, and daidzein 4'-O-β-glucoside for the first time from this species. Isolated compounds along with the methanol extract, water, ethyl acetate and chloroform subextracts were tested for their radical scavenging and cytotoxic activity which was evaluated by MTT assay. According to the results of activity tests, extracts showed a concentration-dependent radical scavenging activity as well as cytotoxic effect on HepG2 cells at 400 μg/mL, whereas the compounds did not exert any obvious cytotoxic effect at tested concentrations.

  16. Patterns in genetic diversity of Trifolium pallescens populations do not reflect chronosequence on alpine glacier forelands. (United States)

    Raffl, C; Holderegger, R; Parson, W; Erschbamer, B


    How does genetic diversity within populations of plants develop during primary succession on alpine glacier forelands? Theory predicts that pioneer populations are characterized by low genetic diversity due to founder effects and that genetic diversity increases within populations as they mature and recurrent gene flow occurs. However, few genetic studies have so far been carried out on plants on glacier forelands. In this study, we analysed the development of genetic diversity with time for populations of Trifolium pallescens along successional series (chronosequences) on three parallel glacier forelands in the European Alps, using neutral amplified fragment length polymorphism. No general trend in the development of genetic diversity was observed with increasing population age: even pioneer populations harboured substantial genetic diversity. Assignment tests showed that the latter consist of a genetic sub-sample from several source areas, and not just from other populations on the glacier forelands. We also detected some long distances-that is, inter-valley gene flow events. However, gene flow was not spatially unrestricted, as shown by a weak isolation by distance pattern within glacier valleys. The actual patterns of genetic diversity along the chronosequences are a result of the combination of factors, such as gene flow and growth rate, influenced by site- and species-specific attributes.

  17. Trifolium isthmocarpum Brot, a salt-tolerant wild leguminous forage crop in salt-affected soils

    Directory of Open Access Journals (Sweden)

    Kawtar Bennani


    Full Text Available Plant scientists are investigating the potential of previously unexploited legume species where environmental and biological stresses constrain the use of more conventional forage crops or where these species are better suited to the needs of sustainable agriculture. Trifolium isthmocarpum Brot., Moroccan clover, occurs as a weed in different habitats in Morocco. It grows in moderately saline areas, where traditional forage legumes cannot be cultivated; however, it has not been widely studied despite its good palatability. The salt tolerance was studied between natural field conditions and glasshouse. The extensive field studies have recorded the species in many different habitats ranging from healthy agricultural lands to abandoned saline areas. The plants maintained high nodulation capacity (ranging between 60% and 97% and nitrogenase activities (average 2.04 µmol C2H4 plant-1 h-1 in different habitats. Shoot systems of plants collected from salt-affected soils exhibited higher concentrations of Na+ and Cl- than those collected from healthy soils. Greenhouse experiments showed that germination percentage and vigor value of the studied species was not significantly (P > 0.05 affected at 160 mM NaCl, and that 25% of the germination ability was maintained when growing on substrats containing 240 mM NaCl. The growth rate of seedlings was not signicantly affected by 160 mM NaCl but was reduced by 38% under 240 mM NaCl. Leaf succulence and indices of leaf water status did not differ among the salt treatments, whereas relative water content was reduced by only 8% and water content at saturation increased by about 12% at high salt concentrations in the growing medium. This study suggest recommending the cultivation of T. isthmocarpum in salt-affected soils, which are widespread and pose a problem for the farmers of Morocco and other countries in the world’s arid belt.

  18. Trifolium pratense L. as a Potential Natural Antioxidant

    Directory of Open Access Journals (Sweden)

    Sanja Vlaisavljevic


    Full Text Available The essential oils of three different growth stages of Trifolium pratense L. (TP1, TP2 and TP3 were investigated by gas chromatography-mass spectrometry and tested for their antioxidant and antimicrobial activities. The highest content of volatile compounds was found in the essential oil sample TP1, where terpenes such as β-myrcene (4.55%, p-cymene (3.59%, limonene (0.86%, tetrahydroionone (1.56% were highlighted due to their biological activity. The antioxidant activity was determined by following the scavenging capacity of the essential oils for the free radicals DPPH·, NO· and O2·-, as well as effects of the investigated oils on lipid peroxidation (LP. In all three cases, the sample TP1 showed the best radical-capturing capacity for DPPH· (27.61 ± 0.12 µg/mL, NO· (16.03 ± 0.11 µg/mL, O2·− (16.62 ± 0.29 µg/mL and also had the best lipid peroxidation effects in the Fe2+/ascorbate induction system (9.35 ± 0.11 µg/mL. Antimicrobial activity was evaluated against the following bacteria cultures: Escherichia coli (ATCC10526, Salmonella typhimurium (ATCC 14028, Staphylococcus aureus (ATCC 11632 and Bacillus cereus (ATCC 10876. None of the examined essential oil samples showed inhibitory effects on the tested bacterial strains.

  19. Molecular phylogenetics and historical biogeography of the west-palearctic common toads (Bufo bufo species complex). (United States)

    Garcia-Porta, J; Litvinchuk, S N; Crochet, P A; Romano, A; Geniez, P H; Lo-Valvo, M; Lymberakis, P; Carranza, S


    In most pan-Eurasiatic species complexes, two phenomena have been traditionally considered key processes of their cladogenesis and biogeography. First, it is hypothesized that the origin and development of the Central Asian Deserts generated a biogeographic barrier that fragmented past continuous distributions in Eastern and Western domains. Second, Pleistocene glaciations have been proposed as the main process driving the regional diversification within each of these domains. The European common toad and its closest relatives provide an interesting opportunity to examine the relative contributions of these paleogeographic and paleoclimatic events to the phylogeny and biogeography of a widespread Eurasiatic group. We investigate this issue by applying a multiproxy approach combining information from molecular phylogenies, a multiple correspondence analysis of allozyme data and species distribution models. Our study includes 304 specimens from 164 populations, covering most of the distributional range of the Bufo bufo species complex in the Western Palearctic. The phylogenies (ML and Bayesian analyses) were based on a total of 1988 bp of mitochondrial DNA encompassing three genes (tRNAval, 16S and ND1). A dataset with 173 species of the family Bufonidae was assembled to estimate the separation of the two pan-Eurasiatic species complexes of Bufo and to date the main biogeographic events within the Bufo bufo species complex. The allozyme study included sixteen protein systems, corresponding to 21 presumptive loci. Finally, the distribution models were based on maximum entropy. Our distribution models show that Eastern and Western species complexes are greatly isolated by the Central Asian Deserts, and our dating estimates place this divergence during the Middle Miocene, a moment in which different sources of evidence document a major upturn of the aridification rate of Central Asia. This climate-driven process likely separated the Eastern and Western species. At the

  20. Identifying abnormalities in symbiotic development between Trifolium spp. and Rhizobium leguminosarum bv. trifolii leading to sub-optimal and ineffective nodule phenotypes (United States)

    Melino, V. J.; Drew, E. A.; Ballard, R. A.; Reeve, W. G.; Thomson, G.; White, R. G.; O'Hara, G. W.


    Background and Aims Legumes overcome nitrogen limitations by entering into a mutualistic symbiosis with N2-fixing bacteria (rhizobia). Fully compatible associations (effective) between Trifolium spp. and Rhizobium leguminosarum bv. trifolii result from successful recognition of symbiotic partners in the rhizosphere, root hair infection and the formation of nodules where N2-fixing bacteroids reside. Poorly compatible associations can result in root nodule formation with minimal (sub-optimal) or no (ineffective) N2-fixation. Despite the abundance and persistence of strains in agricultural soils which are poorly compatible with the commercially grown clover species, little is known of how and why they fail symbiotically. The aims of this research were to determine the morphological aberrations occurring in sub-optimal and ineffective clover nodules and to determine whether reduced bacteroid numbers or reduced N2-fixing activity is the main cause for the Sub-optimal phenotype. Methods Symbiotic effectiveness of four Trifolium hosts with each of four R. leguminosarum bv. trifolii strains was assessed by analysis of plant yields and nitrogen content; nodule yields, abundance, morphology and internal structure; and bacteroid cytology, quantity and activity. Key Results Effective nodules (Nodule Function 83–100 %) contained four developmental zones and N2-fixing bacteroids. In contrast, Sub-optimal nodules of the same age (Nodule Function 24–57 %) carried prematurely senescing bacteroids and a small bacteroid pool resulting in reduced shoot N. Ineffective-differentiated nodules carried bacteroids aborted at stage 2 or 3 in differentiation. In contrast, bacteroids were not observed in Ineffective-vegetative nodules despite the presence of bacteria within infection threads. Conclusions Three major responses to N2-fixation incompatibility between Trifolium spp. and R. l. trifolii strains were found: failed bacterial endocytosis from infection threads into plant cortical

  1. Een duidelijk verschilkenmerk tussen niet-bloeiende Trifolium fragiferum en T. repens

    NARCIS (Netherlands)

    Visser, de A.


    The author mentions a not generally known difference in the leaves of Trifolium repens L. and T. fragiferum L.: 1. All the leaflets of the trifoliolate leaf somewhat shining beneath (fig. 1, a) ..... T. repens 1¹. Terminal leaflet and the acroscopic half of the lateral leaflets dull beneath, the

  2. Gene expression patterns, localization, and substrates of polyphenol oxidase in red clover (Trifolium pratense L.). (United States)

    Polyphenol oxidase (PPO) genes and their corresponding enzyme activity occur in many plants; natural PPO substrates and enzyme/substrate localization are less well characterized. Leaf and root PPO activity in Arabidopsis and five legumes were compared with high-PPO red clover (Trifolium pratense L.)...

  3. Polyphenol oxidase affects normal nodule development in red clover (Trifolium pratense L.) (United States)

    Polyphenol oxidase (PPO) may have multiple functions in tissues, depending on its cellular or tissue localization. We used PPO RNAi transformants of red clover (Trifolium pratense) to determine the role PPO plays in normal development of plants, and especially in nitrogen-fixing nodules. In red clov...

  4. Complete genome sequence of Rhizobium leguminosarum bv trifolii strain WSM2304, an effective microsymbiont of the South American clover Trifolium polymorphum. (United States)

    Reeve, Wayne; O’Hara, Graham; Chain, Patrick; Ardley, Julie; Bräu, Lambert; Nandesena, Kemanthi; Tiwari, Ravi; Malfatti, Stephanie; Kiss, Hajnalka; Lapidus, Alla; Copeland, Alex; Nolan, Matt; Land, Miriam; Ivanova, Natalia; Mavromatis, Konstantinos; Markowitz, Victor; Kyrpides, Nikos; Melino, Vanessa; Denton, Matthew; Yates, Ron; Howieson, John


    Rhizobium leguminosarum bv trifolii is the effective nitrogen fixing microsymbiont of a diverse range of annual and perennial Trifolium (clover) species. Strain WSM2304 is an aerobic, motile, non-spore forming, Gram-negative rod, isolated from Trifolium polymorphum in Uruguay in 1998. This microsymbiont predominated in the perennial grasslands of Glencoe Research Station, in Uruguay, to competitively nodulate its host, and fix atmospheric nitrogen. Here we describe the basic features of WSM2304, together with the complete genome sequence, and annotation. This is the first completed genome sequence for a nitrogen fixing microsymbiont of a clover species from the American center of origin. We reveal that its genome size is 6,872,702 bp encoding 6,643 protein-coding genes and 62 RNA only encoding genes. This multipartite genome was found to contain 5 distinct replicons; a chromosome of size 4,537,948 bp and four circular plasmids of size 1,266,105 bp, 501,946 bp, 308,747 bp and 257,956 bp. PMID:21304679

  5. Complete genome sequence of Rhizobium leguminosarum bv trifolii strain WSM2304, an effective microsymbiont of the South American clover Trifolium polymorphum

    Energy Technology Data Exchange (ETDEWEB)

    Reeve, Wayne [Murdoch University, Perth, Australia; O' Hara, Graham [Murdoch University, Perth, Australia; Chain, Patrick S. G. [Lawrence Livermore National Laboratory (LLNL); Ardley, Julie [Murdoch University, Perth, Australia; Brau, Lambert [Murdoch University, Perth, Australia; Nandesena, Kemanthi [Murdoch University, Perth, Australia; Tiwari, Ravi [Murdoch University, Perth, Australia; Malfatti, Stephanie [Lawrence Livermore National Laboratory (LLNL); Kiss, Hajnalka [Los Alamos National Laboratory (LANL); Lapidus, Alla L. [U.S. Department of Energy, Joint Genome Institute; Copeland, A [U.S. Department of Energy, Joint Genome Institute; Nolan, Matt [U.S. Department of Energy, Joint Genome Institute; Land, Miriam L [ORNL; Ivanova, N [U.S. Department of Energy, Joint Genome Institute; Mavromatis, K [U.S. Department of Energy, Joint Genome Institute; Markowitz, Victor [U.S. Department of Energy, Joint Genome Institute; Kyrpides, Nikos C [U.S. Department of Energy, Joint Genome Institute; Melino, Vanessa [Murdoch University, Perth, Australia; Denton, Matthew [Department of Primary Industries, Victoria, Australia; Yates, Ron [Murdoch University, Perth, Australia; Howieson, John [Murdoch University, Perth, Australia


    Rhizobium leguminosarum bv trifolii is the effective nitrogen fixing microsymbiont of a diverse range of annual and perennial Trifolium (clover) species. Strain WSM2304 is an aerobic, motile, non-spore forming, Gram-negative rod, isolated from Trifolium polymorphum in Uruguay in 1998. This microsymbiont predominated in the perennial grasslands of Glencoe Research Station, in Uruguay, to competitively nodulate its host, and fix atmospheric nitrogen. Here we describe the basic features of WSM2304, together with the complete genome sequence, and annotation. This is the first completed genome sequence for a nitrogen fixing microsymbiont of a clover species from the American center of origin. We reveal that its genome size is 6,872,702 bp encoding 6,643 protein-coding genes and 62 RNA only encoding genes. This multipartite genome was found to contain 5 distinct replicons; a chromosome of size 4,537,948 bp and four circular plasmids of size 1,266,105 bp, 501,946 bp, 308,747 bp and 257,956 bp.

  6. Timpanismo espumoso em bovinos leiteiros em pastagens de Trifolium spp. (Leg.Caesalpinoideae Leguminous bloat in dairy cattle on Trifolium spp. pastures

    Directory of Open Access Journals (Sweden)

    André Gustavo Cabrera Dalto


    Full Text Available O pastejo de plantas leguminosas que provocam fermentação excessiva pode causar surtos de timpanismo e mortes em ruminantes. Em uma propriedade no município de São Francisco de Paula, Rio Grande do Sul, oito bovinos de um total de 66 morreram subitamente, ao haverem sido transferidos de um potreiro de campo nativo, para outro cuja pastagem era composta por Trifolium repens e Trifolium pratense. Os animais foram encontrados mortos no amanhecer do dia seguinte à transferência, não foram observados sinais clínicos prévios. Os principais achados macroscópicos incluíram aumento de volume abdominal, protrusão de vagina e língua, distensão ruminal, fígado de coloração pálida e aumento do baço. Na histologia, havia congestão e edema pulmonares e hiperplasia linfóide difusa e acentuada no baço. A evidência de ingestão das leguminosas associada aos achados patológicos e à ausência de microrganismos no exame bacteriológico confirmaram o diagnóstico de timpanismo.Leguminous bloat may occur in cattle which graze pastures consisting of lush forages. In a dairy farm located on the municipality of São Francisco de Paula, Rio Grande do Sul, eight out of 66 cows died suddenly after being transferred to a paddock whose pastures were composed of Trifolium repens and Trifolium pratense. Animals were found dead in the morning of the next day after being transferred; no clinical signs were noticed. Main gross findings included enhanced abdominal volume, protrusion and congestion of the tongue and vagina, ruminal distension, pale liver, and enhanced spleen. Histologically, there were lung congestion and edema, and splenic lymphoid hyperplasia. The evidence of leguminous forages consumption associated with the pathological findings and the absence of growth on bacteriology confirmed the diagnosis.

  7. A Novel Method to Overcome Coat-Imposed Seed Dormancy in Lupinus albus L. and Trifolium pratense L.

    Directory of Open Access Journals (Sweden)

    Iskender Tiryaki


    Full Text Available We have developed a novel method to overcome coat-imposed seed dormancy in legume plants. Seeds of Lupinus albus L. and Trifolium pratense L. were stored in a freezer at −80°C for a period of time and then immediately treated with or without hot water at 90°C for 5 seconds. Germination tests were carried out in darkness at 20±1.0°C with four replications in a completely randomized design. Final germination percentage (FGP, germination rate, and synchrony of seeds were evaluated. The results showed that new approach of freeze-thaw scarification provided high percentage of germinations in white lupin (84.16% and red clover (74.50% seeds while control seeds had FGPs of 3.3% and 26.0%, respectively. The immediate thawing of frozen seeds in hot water for 5 seconds was found not only an effective and reliable but also the quickest seed treatment method to prevail against coat-imposed seed dormancy in legume species and may become operationally applicable to other plant species.

  8. Trifolium pratense and T. repens (Leguminosae: Edible Flower Extracts as Functional Ingredients

    Directory of Open Access Journals (Sweden)

    Rosa Tundis


    Full Text Available Trifolium pratense (red clover and T. repens (white clover edible flowers were investigated for their chemical profile and health properties. The total phenols and flavonoids contents were evaluated. Quercetin, kaempferol, luteolin, rutin, and myricetin were used as markers and quantified by HPLC. The antioxidant effects were investigated by using different in vitro assays. Moreover, α-amylase, α-glucosidase and lipase inhibitory activities were evaluated. T. repens flowers extract showed a good radical scavenging activity in both DPPH and ABTS tests with IC50 values of 10.3 and 21.4 μg/mL, respectively. White clover extract demonstrated promising α-amylase and lipase inhibitory activities with IC50 values of 25.0 and 1.3 μg/mL, respectively. The obtained results support the use of Trifolium flowers as healthy food ingredients.

  9. An integrated genetic linkage map for white clover (Trifolium repens L.) with alignment to Medicago. (United States)

    Griffiths, Andrew G; Barrett, Brent A; Simon, Deborah; Khan, Anar K; Bickerstaff, Paul; Anderson, Craig B; Franzmayr, Benjamin K; Hancock, Kerry R; Jones, Chris S


    White clover (Trifolium repens L.) is a temperate forage legume with an allotetraploid genome (2n=4×=32) estimated at 1093 Mb. Several linkage maps of various sizes, marker sources and completeness are available, however, no integrated map and marker set has explored consistency of linkage analysis among unrelated mapping populations. Such integrative analysis requires tools for homoeologue matching among populations. Development of these tools provides for a consistent framework map of the white clover genome, and facilitates in silico alignment with the model forage legume, Medicago truncatula. This is the first report of integration of independent linkage maps in white clover, and adds to the literature on methyl filtered GeneThresher®-derived microsatellite (simple sequence repeat; SSR) markers for linkage mapping. Gene-targeted SSR markers were discovered in a GeneThresher® (TrGT) methyl-filtered database of 364,539 sequences, which yielded 15,647 SSR arrays. Primers were designed for 4,038 arrays and of these, 465 TrGT-SSR markers were used for parental consensus genetic linkage analysis in an F1 mapping population (MP2). This was merged with an EST-SSR consensus genetic map of an independent population (MP1), using markers to match homoeologues and develop a multi-population integrated map of the white clover genome. This integrated map (IM) includes 1109 loci based on 804 SSRs over 1274 cM, covering 97% of the genome at a moderate density of one locus per 1.2 cM. Eighteen candidate genes and one morphological marker were also placed on the IM. Despite being derived from disparate populations and marker sources, the component maps and the derived IM had consistent representations of the white clover genome for marker order and genetic length. In silico analysis at an E-value threshold of 1e-20 revealed substantial co-linearity with the Medicago truncatula genome, and indicates a translocation between T. repens groups 2 and 6 relative to M. truncatula

  10. Accumulation of heavy metals in Medicago sativa L. and Trifolium pratense L. at the contaminated fluvisol

    Directory of Open Access Journals (Sweden)

    Jakšić Snežana P.


    Full Text Available Recently, heavy metals concentrations increased in some agricultural areas due to the consequences of anthropogenic impacts. The aim of this study was to determine the level of heavy metals (As, Cr, Ni and Pb in Medicago sativa L. and Trifolium pratense L. grown on fluvisol, in order to obtain information on safety of these nutrients. The total content of Pb, As, Cr and Ni in the samples of fluvisol was above the maximum allowable amount. The content of heavy metals in Medicago sativa L. and Trifolium pratense L. was below the critical and toxic concentrations in all samples originating from contaminated soil. It was concluded that the accumulation of heavy metals in plants did not depend only on the total content in soil, but also the affinity of the plant, and individual and interactive effects of various soil properties. No statistically significant differences in the accumulation of heavy metals between Medicago sativa L. and Trifolium pratense L were observed. It is necessary to further control of heavy metals in the investigated area, in order to prevent their entry into the food chain and provide healthy food.

  11. Genotypic and phenotypic diversity does not affect productivity and drought response in competitive stands of Trifolium repens

    Directory of Open Access Journals (Sweden)

    Heidrun eHuber


    affected by soil moisture, indicating that increasing fluctuations in water availability result in few short-term effects on genotypic diversity in this stoloniferous grassland species. Communities dominated by stoloniferous herbs such as Trifolium repens may be relatively resilient to environmental change and to low levels of genetic diversity.

  12. Influence of fly ash aided phytostabilisation of Pb, Cd and Zn highly contaminated soils on Lolium perenne and Trifolium repens metal transfer and physiological stress

    Energy Technology Data Exchange (ETDEWEB)

    Lopareva-Pohu, A.; Verdin, A.; Garcon, G.; Sahraoui, A.L.H.; Pourrut, B.; Debiane, D.; Waterlot, C.; Laruelle, F.; Bidar, G.; Douay, F.; Shirali, P. [University of Lille Nord France, Lille (France)


    Due to anthropogenic activities, large extends of soils are highly contaminated by Metal Trace Element (MTE). Aided phytostabilisation aims to establish a vegetation cover in order to promote in situ immobilisation of trace elements by combining the use of metal-tolerant plants and inexpensive mineral or organic soil amendments. Eight years after Coal Fly Ash (CFA) soil amendment, MTE bioavailability and uptake by two plants, Lolium perenne and Trifolium repens, were evaluated, as some biological markers reflecting physiological stress. Results showed that the two plant species under study were suitable to reduce the mobility and the availability of these elements. Moreover, the plant growth was better on CFA amended MTE-contaminated soils, and the plant sensitivity to MTE-induced physiological stress, as studied through photosynthetic pigment contents and oxidative damage was lower or similar. In conclusion, these results supported the usefulness of aided phytostabilisation of MTE-highly contaminated soils.

  13. Ozone stress and antioxidant substances in Trifolium repens and Centaurea jacea leaves

    Energy Technology Data Exchange (ETDEWEB)

    Ferreira Severino, Joyce [Department of Environmental Research/UU, ARC Seibersdorf Research GmbH, A-2444 Seibersdorf (Austria) and Vienna University of Technology, Institute of Chemical Engineering, Getreidemark 9/166, 1060 Vienna (Austria)]. E-mail:; Stich, Karl [Vienna University of Technology, Institute of Chemical Engineering, Getreidemark 9/166, 1060 Vienna (Austria); Soja, Gerhard [Department of Environmental Research/UU, ARC Seibersdorf Research GmbH, A-2444 Seibersdorf (Austria)]. E-mail:


    Ozone-sensitive (NC-S clone) and resistant plants (NC-R clone) of Trifolium repens and Centaurea jacea were exposed to moderate ozone concentrations in ambient air. The aim of this study was the investigation of the relation between ozone-sensitivity and leaf concentrations of antioxidants (ascorbic acid, total phenolics and total antioxidant capacity). NC-R clone showed the highest concentrations of antioxidants with 50-70% more ascorbic acid than NC-S. NC-R had about 5 times more ascorbic acid in the young leaves and 9 times more in the old leaves than Centaurea. In a fumigation experiment with acute ozone stress (100 nl L{sup -1}) the antioxidant levels changed profoundly. The ozone-injured leaves of NC-S had 6-8 times more total phenolics than uninjured leaves. Generally older leaves had lower antioxidant concentrations and were more prone to ozone injury than younger leaves. Ascorbic acid concentrations were closer related to the appearance of visible ozone injury than the other antioxidative parameters. - Low leaf ascorbic acid levels are a main cause for visible ozone injuries in Trifolium and Centaurea.

  14. Physiological and biochemical responses of the forage legume Trifolium alexandrinum to different saline conditions and nitrogen levels. (United States)

    Zouhaier, Barhoumi; Mariem, Maatallah; Mokded, Rabhi; Rouached, Aida; Alsane, Khaldoun; Chedly, Abdelly; Abderrazek, Smaoui; Abdallah, Atia


    Salinity stress reduces plant productivity, but low levels of salinity often increase plant growth rates in some species. We herein describe the effects of salinity on plant growth while focusing on nitrogen use. We treated Trifolium alexandrinum with two nitrogen concentrations and salinity levels and determined growth rates, mineral concentrations, nitrogen use efficiency, photosynthesis rates, and nitrate reductase (NR, E.C. and glutamine synthetase (GS, EC activities. The T. alexandrinum growth rate increased following treatment with 100 mM NaCl in low nitrogen (LN) and high nitrogen (HN) conditions. Salt treatment also increased root volume, intrinsic water use efficiency, and nitrogen use efficiency in LN and HN conditions. These changes likely contributed to higher biomass production. Salinity also increased accumulations of sodium, chloride, and phosphate, but decreased potassium and calcium levels and total nitrogen concentrations in all plant organs independently of the available nitrogen level. However, the effect of salt treatment on magnesium and nitrate concentrations in photosynthetic organs depended on nitrogen levels. Salt treatment reduced photosynthesis rates in LN and HN conditions because of inhibited stomatal conductance. The effects of salinity on leaf NR and GS activities depended on nitrogen levels, with activities increasing in LN conditions. In saline conditions, LN availability resulted in optimal growth because of low chloride accumulation and increases in total nitrogen concentrations, nitrogen use efficiency, and NR and GS activities in photosynthetic organs. Therefore, T. alexandrinum is a legume forage crop that can be cultivated in low-saline soils where nitrogen availability is limited.

  15. Phenolic profiles and polyphenol oxidase (PPO) gene expression of red clover (Trifolium pratense) selected for decreased postharvest browning (United States)

    Red clover (Trifolium pratense L.) is a legume forage abundant in phenolic compounds. It tends to brown when cut for hay, due to oxidation of phenolic compounds catalyzed by polyphenol oxidase (PPO), and subsequent binding to proteins. Selecting for a greener hay may provide information about the re...

  16. Toxicity of eight polycyclic aromatic compounds to the red clover (Trifolium pratense), ryegrass (Lolium perenne), and mustard (Sinapsis alba)

    DEFF Research Database (Denmark)

    Sverdrup, L. E.; Krogh, P. H.; Nielsen, T.


    The effect of eight polycyclic aromatic compounds (PACs) on the seed emergence and early life-stage growth of three terrestrial plants (Sinapsis alba, Trifolium pratense and Lolium perenne) were studied in a greenhouse, using a Danish agricultural soil with an organic carbon content of 1.6%. After...

  17. Toxicity of eight polycyclic aromatic compounds to red clover (Trifolium pratense), ryegrass (Lolium perenne), and mustard (Sinapsis alba)

    DEFF Research Database (Denmark)

    Sverdrup, L.E.; Krogh, P.H.; Nielsen, T.


    The effect of eight polycyclic aromatic compounds (PACs) on the seed emergence and early life-stage growth of three terrestrial plants (Sinapsis alba, Trifolium pratense and Lolium perenne) were studied in a greenhouse, using a Danish agricultural soil with an organic carbon content of 1.6%. After...

  18. The effects on photosynthetic CO{sub 2} assimilation to long-term elevation of atmospheric CO{sub 2} concentration: An assessment of the response of Trifolium Repens L. cv. Blanca grown at F.A.C.E.

    Energy Technology Data Exchange (ETDEWEB)

    Lewis, C.E.


    Understanding how photosynthetic capacity acclimates to elevated CO{sub 2} concentrations is vital in predicting the response of important grassland species such as Trifolium repens. Previous studies of acclimatization have been carried out in artificial experimental conditions, such as acrylic greenhouses or controlled environment chambers. The advent of FACE technology has enabled a large area of crop to be fumigated in the field, providing more realistic growing conditions. Pure stands of Trifolium repens L. cv. Blanca grown at either 355 or 600{mu}mol mol{sup -1} CO{sub 2} were examined, and their photosynthetic response to elevated Ca determined via gas exchange studies. Rates of photosynthesis of young, fully expanded leaves were increased between 21 and 36% when grown and measured at elevated CO{sub 2}. This increase in A corresponded to a decrease in g{sub S} of between 18 and 52%. No acclimation effect was observed in the most frequently cut stands, whilst the response of stands clipped only 4 times per year was more variable. When down regulation of V{sub cmax} did occur, this was not nearly as marked as that which occurred in 3 other temperate species (Chrysanthemum leucanthemum, Ranunculus friesianus, Plantago lanceolata (L.) J. & C. Presl.), at similar growth regimes. No acclimation of stomatal frequency, SI or pore length was found to occur in the enriched clover stands.

  19. Badania mieszańców w rodzaju Trifolium L. IV. Cytogenetyka mieszańca Trifolium repens L. × T. isthomocarpum Brot. [Investigations on hybrids of the genus Trifolium L. P. IV. Cytogenetics of the cross T. repens L. × T. isthomocarpum Brot.

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    T. Kazimierski


    Full Text Available Interspecific F1 hybrid between Trifolium repens (2n = 32 and T. isthomocarpum (2n = 16 was obtained. The hybrid is sterile and its disturbed meiotic divisions are described. It is suggested from cytogenetic evidence that one of the genomes of T. repens is similar to the genome of T. isthomacarpum.

  20. Biosynthesis and antibacterial activity of ZnO nanoparticles using Trifolium pratense flower extract

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    Renata Dobrucka


    Full Text Available Zinc oxide (ZnO has broad applications in various areas. Nanoparticle synthesis using plants is an alternative to conventional physical and chemical methods. It is known that the biological synthesis of nanoparticles is gaining importance due to its simplicity, eco-friendliness and extensive antimicrobial activity. Also, in this study we report the synthesis of ZnO nanoparticles using Trifolium pratense flower extract. The prepared ZnO nanoparticles have been characterized by UV–Vis absorption spectroscopy, X-ray diffraction (XRD, Fourier transform infrared spectroscopy (FT-IR, and scanning electron microscopy (SEM with Energy dispersive X-ray analysis (EDX. Besides, this study determines the antimicrobial efficacy of the synthesized ZnO nanoparticles against clinical and standard strains of S. aureus and P. aeruginosa and standard strain of E. coli.

  1. Genome sequence of the Trifolium rueppellianum -nodulating Rhizobium leguminosarum bv. trifolii strain WSM2012. (United States)

    Reeve, Wayne; Melino, Vanessa; Ardley, Julie; Tian, Rui; De Meyer, Sofie; Terpolilli, Jason; Tiwari, Ravi; Yates, Ronald; O’Hara, Graham; Howieson, John; Ninawi, Mohamed; Held, Brittany; Bruce, David; Detter, Chris; Tapia, Roxanne; Han, Cliff; Wei, Chia-Lin; Huntemann, Marcel; Han, James; Chen, I-Min; Mavromatis, Konstantinos; Markowitz, Victor; Szeto, Ernest; Ivanova, Natalia; Mikhailova, Natalia; Pagani, Ioanna; Pati, Amrita; Goodwin, Lynne; Woyke, Tanja; Kyrpides, Nikos


    Rhizobium leguminosarum bv. trifolii WSM2012 (syn. MAR1468) is an aerobic, motile, Gram-negative, non-spore-forming rod that was isolated from an ineffective root nodule recovered from the roots of the annual clover Trifolium rueppellianum Fresen growing in Ethiopia. WSM2012 has a narrow, specialized host range for N2-fixation. Here we describe the features of R. leguminosarum bv. trifolii strain WSM2012, together with genome sequence information and annotation. The 7,180,565 bp high-quality-draft genome is arranged into 6 scaffolds of 68 contigs, contains 7,080 protein-coding genes and 86 RNA-only encoding genes, and is one of 20 rhizobial genomes sequenced as part of the DOE Joint Genome Institute 2010 Community Sequencing Program. PMID:24976885

  2. Arbuscular mycorrhiza enhanced arsenic resistance of both white clover (Trifolium repens Linn.) and ryegrass (Lolium perenne L.) plants in an arsenic-contaminated soil

    Energy Technology Data Exchange (ETDEWEB)

    Dong Yan; Zhu Yongguan [Department of Soil Environmental Science, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, 18 Shuangqing Road, Beijing 100085 (China); Smith, F. Andrew [Soil and Land Systems, School of Earth and Environmental Sciences, Waite Campus, University of Adelaide, Adelaide, SA 5005 (Australia); Wang Youshan [Institute of Plant Nutrition and Resources, Beijing Academy of Agriculture and Forestry, Beijing 100089 (China); Chen Baodong [Department of Soil Environmental Science, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, 18 Shuangqing Road, Beijing 100085 (China)], E-mail:


    In a compartmented cultivation system, white clover (Trifolium repens Linn.) and ryegrass (Lolium perenne L.), with their roots freely intermingled, or separated by 37 {mu}m nylon mesh or plastic board, were grown together in an arsenic (As) contaminated soil. The influence of AM inoculation on plant growth, As uptake, phosphorus (P) nutrition, and plant competitions were investigated. Results showed that both plant species highly depended on mycorrhizas for surviving the As contamination. Mycorrhizal inoculation substantially improved plant P nutrition, and in contrast markedly decreased root to shoot As translocation and shoot As concentrations. It also showed that mycorrhizas affected the competition between the two co-existing plant species, preferentially benefiting the clover plants in term of nutrient acquisition and biomass production. Based on the present study, the role of AM fungi in plant adaptation to As contamination, and their potential use for ecological restoration of As contaminated soils are discussed. - Both white clover and ryegrass highly depend on the mycorrhizal associations for surviving heavy arsenic contamination.

  3. Shoot and root responses of Trifolium vesiculosum to boron fertilization in an acidic Brazilian soil

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    Nerilde Favaretto


    Full Text Available To analyze the influence of boron fertilization on shoot and root growth of Trifolium vesiculosum (arrowleaf clover, an acid soil profile (60 cm depth with 67% Al saturation was recreated in a column (three layers of 20 cm each. Lime and fertilizer (P and K were incorporated into the top 20 cm. The treatments consisted of six boron rates where boric acid was mixed throughout the profile. Addition of boron to soil with low pH and high Al increased the root and shoot growth, independent of the rate applied. Boron inhibited Al toxicity, but no effect was observed in the root length when Al was not present in the soil. It was also observed that there was more root growth below the plow layer (0-20 cm, suggesting better root distribution in the soil profile which could be important for the plant growth, especially under drought conditions.Estudos têm mostrado que o boro (B afeta o crescimento das raízes em solo ácido reduzindo a toxidez do alumínio (Al. Para analisar a influência do boro no crescimento da parte aérea e raízes do Trifolium Vesiculosum (trevo vesiculoso um perfil de solo ácido (60 cm de profundidade com 67% de saturação de Al foi recriado em uma coluna (três camadas com 20 cm cada. Calcário e adubos (P e K foram incorporados na camada de 0-20 cm. Os tratamentos consistiram de seis doses de boro sendo o ácido bórico incorporado em todo o perfil. A adubação com boro em solo com baixo pH e elevado Al aumentou o crescimento da parte aérea e raízes, no entanto, independente da dose aplicada. Boro pode inibir a toxidez de Al, porém não observou-se efeito no comprimento de raízes sem a presença de Al no solo. Observou-se também um grande aumento no crescimento de raízes abaixo da camada arável (0-20 cm, fornecendo uma melhor distribuição de raízes no perfil do solo, o que pode ser importante para o crescimento da planta especialmente em condição de seca.

  4. Red clover (Trifolium pratense) isoflavones and serum homocysteine in premenopausal women: a pilot study. (United States)

    Samman, Samir; Koh, Hoon Siang; Flood, Victoria M; Blakesmith, Sarah J; Petocz, Peter; Lyons-Wall, Philippa M


    There is limited information on the effect of isoflavones on homocysteine concentrations, a risk factor for a number of chronic diseases. Twenty-three premenopausal women participated in a double-blind, randomized, parallel study for four menstrual cycles. Subjects consumed either placebo or purified red clover (Trifolium pratense) isoflavone (86 mg/day) tablets. Blood samples were collected weekly during cycles 1, 3, and 4 for determination of serum folate and total homocysteine concentrations. Dietary intake was monitored monthly. Concentrations of folate and homocysteine in serum did not change significantly in either group, and there were no significant differences observed between the follicular and luteal phases of the menstrual cycle. The participants' dietary records indicated that nutrient intake was constant, and compliance was confirmed by analysis of urinary isoflavone concentrations and tablet counts in returned containers. These results suggest that in the absence of any dietary modification, supplementation with purified isoflavones that are predominantly methoxylated has no effect on serum homocysteine or folate in premenopausal women.

  5. Molecular evolution of the Li/li chemical defence polymorphism in white clover (Trifolium repens L.). (United States)

    Olsen, K M; Sutherland, B L; Small, L L


    White clover (Trifolium repens) is naturally polymorphic for cyanogenesis (hydrogen cyanide release following tissue damage). The ecological factors favouring cyanogenic and acyanogenic plants have been examined in numerous studies over the last half century, making this one of the best-documented examples of an adaptive polymorphism in plants. White clover cyanogenesis is controlled by two, independently segregating Mendelian genes: Ac/ac controls the presence/absence of cyanogenic glucosides; and Li/li controls the presence/absence of their hydrolysing enzyme, linamarase. In this study, we examine the molecular evolution and population genetics of Li as it relates to the cyanogenesis polymorphism. We report here that Li exists as a single-copy gene in plants possessing linamarase activity, and that the absence of enzyme activity in li/li plants is correlated with the absence of much or all of the gene from the white clover genome. Consistent with this finding, we confirm by reverse transcription-polymerase chain reaction that Li gene expression is absent in plants lacking enzyme activity. In a molecular population genetic analysis of Li and three unlinked genes using a worldwide sample of clover plants, we find an absence of nucleotide variation and statistically significant deviations from neutrality at Li; these findings are consistent with recent positive directional selection at this cyanogenesis locus.

  6. In vitro isoflavonoid production and analysis in natural tetraploid Trifolium pratense (red clover calluses

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    Tugba Ercetin


    Full Text Available Isoflavones are polyphenolic phytoestrogens, predominantly found in leguminous plants. Trifolium pratense L., Fabaceae (red clover, is rich in isoflavones that possess estrogenic activity due to their similar molecular structure and effectiveness in preventing health conditions such as menopause, osteoporosis, cardiovascular disease, hypertension and hormone-dependent cancers. In this study, presence and amount of various phytoestrogens in the tetraploid plant and in the calluses derived from the plants were investigated. Calluses were generated from explants obtained from natural tetraploid T. pratense seedlings. The best callus formation was obtained from hypocotyl explants cultured in Phillips Collins and Gamborg B5 media containing different plant growth regulators. Flowers of plants and calluses were analysed for formononetin, biochanin A, genistein and daidzein contents using HPLC. In HPLC analysis, high levels of formononetin (0.249 µg/mg were determined in natural tetraploid T. pratense flowers in addition to genistein and biochanin A. In calluses, highest isoflavone content (1.15 µg/mg formononetin was observed in modified Gamborg B5 medium. Biochanin A content of calluses and the plant were found to be nearly the same. But formononetin and genistein contents of the calluses in this medium were found to be respectively 4.62 and 21.39 folds higher than the tetraploid plant.

  7. In vitro isoflavonoid production and analysis in natural tetraploid Trifolium pratense (red clover calluses

    Directory of Open Access Journals (Sweden)

    Tugba Ercetin


    Full Text Available Isoflavones are polyphenolic phytoestrogens, predominantly found in leguminous plants. Trifolium pratense L., Fabaceae (red clover, is rich in isoflavones that possess estrogenic activity due to their similar molecular structure and effectiveness in preventing health conditions such as menopause, osteoporosis, cardiovascular disease, hypertension and hormone-dependent cancers. In this study, presence and amount of various phytoestrogens in the tetraploid plant and in the calluses derived from the plants were investigated. Calluses were generated from explants obtained from natural tetraploid T. pratense seedlings. The best callus formation was obtained from hypocotyl explants cultured in Phillips Collins and Gamborg B5 media containing different plant growth regulators. Flowers of plants and calluses were analysed for formononetin, biochanin A, genistein and daidzein contents using HPLC. In HPLC analysis, high levels of formononetin (0.249 µg/mg were determined in natural tetraploid T. pratense flowers in addition to genistein and biochanin A. In calluses, highest isoflavone content (1.15 µg/mg formononetin was observed in modified Gamborg B5 medium. Biochanin A content of calluses and the plant were found to be nearly the same. But formononetin and genistein contents of the calluses in this medium were found to be respectively 4.62 and 21.39 folds higher than the tetraploid plant.

  8. Leaf phenolic compounds in red clover (Trifolium pratense L.) induced by exposure to moderately elevated ozone

    Energy Technology Data Exchange (ETDEWEB)

    Saviranta, Niina M.M. [University of Kuopio, Department of Biosciences, Institute of Applied Biotechnology, Box 1627, 70211 Kuopio (Finland); Julkunen-Tiitto, Riitta; Oksanen, Elina [University of Joensuu, Faculty of Biosciences, Natural Product Research Laboratories, Box 111, 80101 Joensuu (Finland); Karjalainen, Reijo O., E-mail: reijo.karjalainen@uku.f [University of Kuopio, Department of Biosciences, Institute of Applied Biotechnology, Box 1627, 70211 Kuopio (Finland); AgriFood Research Finland, 31600 Jokioinen (Finland)


    Red clover (Trifolium pratense L.), an important feed crop in many parts of the world, is exposed to elevated ozone over large areas. Plants can limit ozone-induced damages by various defence mechanisms. In this work, changes in the concentrations of antioxidant phenolic compounds induced by slightly elevated levels of ozone were determined in red clover leaves by high-performance liquid chromatography and mass spectrometry. 31 different phenolics were identified and the most abundant isoflavones and flavonoids were biochanin A glycoside malonate (G-M), formononetin-G-M and quercetin-G-M. Elevated ozone (mean 32.4 ppb) increased the total phenolic content of leaves and also had minor effects on the concentrations of individual compounds. Elevated ozone increased the net photosynthesis rate of red clover leaves before visible injuries by 21-23%. This study thus suggests that the concentrations of phenolics in red clover leaves change in response to slightly elevated ozone levels. - Concentrations of antioxidant phenolic compounds from red clover can be influenced by elevated ozone.

  9. [Effects of bamboo charcoal on the growth of Trifolium repens and soil bacterial community structure]. (United States)

    Li, Song-Hao; He, Dong-Hua; Shen, Qiu-Lan; Xu, Qiu-Fang


    The effects of addition rates (0, 3% and 9%) and particle sizes (0.05, 0.05-1.0 and 1.0-2.0 mm) of bamboo charcoal on the growth of Trifolium repens and soil microbial community structure were investigated. The results showed that bamboo charcoal addition greatly promoted the early growth of T. repens, with the 9% charcoal addition rate being slightly better than the 3% charcoal addition rate. The effects of different particle sizes of bamboo charcoal on the growth of T. repens were not different significantly. Growth promotion declined with time during 120 days after sowing, and disappeared completely after 5 months. DGGE analysis of the bacterial 16S rDNA V3 fragment indicated that bamboo charcoal altered the soil bacterial community structure. The amount and Shannon diversity index of bacteria in the bamboo charcoal addition treatments increased compared with CK. The quantitative analysis showed that the amount of bacteria in the treatment with bamboo charcoal of fine particle (D bamboo charcoal had a great effect on soil bacteria amount compared with the charcoal of other sizes at the same addition rate.

  10. Ultrastructural changes of the egg apparatus associated with fertilisation of natural tetraploid Trifolium pratense L. (Fabaceae). (United States)

    Buyukkartal, H Nurhan Bakar


    The aim of this study is to describe the ultrastructural changes of the egg apparatus associated with fertilisation of the natural tetraploid Trifolium pratense. The pollen tube enters one of the synergids through the filliform apparatus from the micropyle. Before the entry of the pollen tube into the embryo sac, one of the synergids begins to degenerate, as indicated by increased electron density and a loss of volume. This cell serves as the site of entry for the pollen tube. Following fertilization, the vacuolar organisation in the zygote changes; in addition to the large micropylar vacuole, there are several small vacuoles of varying size. Ribosomal concentration increases significantly after fertilisation. In T. pratense, ultrastructural changes between the egg cell and zygote stages are noticeable. Several marked changes occur in the egg cell because of fertilisation. The zygote cell contains ribosomes has many mitochondria, plastids, lipids, vacuoles. After fertilization, most of the food reserves are located in the integument in the form of starch. The zygote shows ultrastructural changes when compared to the egg cell and appears to be metabolically active.

  11. Efeitos do Trifolium pratense nos sintomas climatéricos e sexuais na pós-menopausa Effects of Trifolium pratense on the climacteric and sexual symptoms in postmenopause

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    Cecília Del Giorno


    Full Text Available OBJETIVO: Avaliar os efeitos do tratamento com Trifolium pratense nos sintomas climatéricos e na satisfação sexual de mulheres na pós-menopausa. MÉTODOS: Este estudo foi prospectivo, randomizado, duplo-cego e controlado com placebo. Foram selecionadas 120 mulheres na faixa etária de 45 anos a 65 anos com sintomas climatéricos, amenorreia superior a um ano e sem tratamento nos últimos seis meses. Após a seleção, foram divididas em dois grupos: GT -receberam Trifolium pratense na dose de 40 mg, 1 capsula/dia; GP -receberam placebo (controle, contendo lactose, 1 cápsula/dia. A duração do tratamento foi de 12 meses. As pacientes foram avaliadas clinica e laboratorialmente antes do tratamento e com quatro, oito e 12 meses de tratamento. Foi empregado também o Índice Menopausal de Kupperman (IMK e o Inventário de Satisfação Sexual Golombok Rust. No final do estudo, cada grupo tinha 50 pacientes. RESULTADOS: Houve melhora significante dos sintomas menopausais após quatro meses de tratamento pelo IMK, principalmente em relação aos fogachos, comparando os dados antes do tratamento nos dois grupos, porém, não houve diferença significante entre os grupos. Não houve melhora na sexualidade antes e após o tratamento. CONCLUSÃO: O tratamento por 12 meses com Trifolium pratense, na dose de 40mg/dia, não promoveu melhora significante dos sintomas menopausais e na satisfação sexual.OBJECTIVE: To evaluate effects of treatment with Trifolium pratense on climacteric symptoms and sexual satisfaction in postmenopausal women. METHODS: This study was prospective, randomized, double-blind and placebo-controlled. We selected 120 women, aged between 45 and 65 years with climacteric symptoms, with absence of menstruation (amenorrhea for more then one year and without any treatment in the last six months. After selection, women were divided into two groups: GT received 40 mg of Trifolium pratense (one capsule per day; GP received placebo

  12. Developmental changes in the germinability, desiccation tolerance, hardseededness, and longevity of individual seeds of Trifolium ambiguum (United States)

    Hay, F. R.; Smith, R. D.; Ellis, R. H.; Butler, L. H.


    Background and Aims Using two parental clones of outcrossing Trifolium ambiguum as a potential model system, we examined how during seed development the maternal parent, number of seeds per pod, seed position within the pod, and pod position within the inflorescence influenced individual seed fresh weight, dry weight, water content, germinability, desiccation tolerance, hardseededness, and subsequent longevity of individual seeds. Methods Near simultaneous, manual reciprocal crosses were carried out between clonal lines for two experiments. Infructescences were harvested at intervals during seed development. Each individual seed was weighed and then used to determine dry weight or one of the physiological behaviour traits. Key Results Whilst population mass maturity was reached at 33–36 days after pollination (DAP), seed-to-seed variation in maximum seed dry weight, when it was achieved, and when maturation drying commenced, was considerable. Individual seeds acquired germinability between 14 and 44 DAP, desiccation tolerance between 30 and 40 DAP, and the capability to become hardseeded between 30 and 47 DAP. The time for viability to fall to 50 % (p50) at 60 % relative humidity and 45 °C increased between 36 and 56 DAP, when the seed coats of most individuals had become dark orange, but declined thereafter. Individual seed f. wt at harvest did not correlate with air-dry storage survival period. Analysing survival data for cohorts of seeds reduced the standard deviation of the normal distribution of seed deaths in time, but no sub-population showed complete uniformity of survival period. Conclusions Variation in individual seed behaviours within a developing population is inherent and inevitable. In this outbreeder, there is significant variation in seed longevity which appears dependent on embryo genotype with little effect of maternal genotype or architectural factors. PMID:20228084

  13. Molecular diversity and phylogeny of indigenous Rhizobium leguminosarum strains associated with Trifolium repens plants in Romania. (United States)

    Efrose, Rodica C; Rosu, Craita M; Stedel, Catalina; Stefan, Andrei; Sirbu, Culita; Gorgan, Lucian D; Labrou, Nikolaos E; Flemetakis, Emmanouil


    The symbiotic nitrogen fixing legumes play an essential role in sustainable agriculture. White clover (Trifolium repens L.) is one of the most valuable perennial legumes in pastures and meadows of temperate regions. Despite its great agriculture and economic importance, there is no detailed available information on phylogenetic assignation and characterization of rhizobia associated with native white clover plants in South-Eastern Europe. In the present work, the diversity of indigenous white clover rhizobia originating in 11 different natural ecosystems in North-Eastern Romania were assessed by a polyphasic approach. Initial grouping showed that, 73 rhizobial isolates, representing seven distinct phenons were distributed into 12 genotypes, indicating a wide phenotypic and genotypic diversity among the isolates. To clarify their phylogeny, 44 representative strains were used in sequence analysis of 16S rRNA gene and IGS fragments, three housekeeping genes (atpD, glnII and recA) and two symbiosis-related genes (nodA and nifH). Multilocus sequence analysis (MLSA) phylogeny based on concatenated housekeeping genes delineated the clover isolates into five putative genospecies. Despite their diverse chromosomal backgrounds, test strains shared highly similar symbiotic genes closely related to Rhizobium leguminosarum biovar trifolii. Phylogenies inferred from housekeeping genes were incongruent with those of symbiotic genes, probably due to occurrence of lateral transfer events among native strains. This is the first polyphasic taxonomic study to report on the MLSA-based phylogenetic diversity of indigenous rhizobia nodulating white clover plants grown in various soil types in South-Eastern Europe. Our results provide valuable taxonomic data on native clover rhizobia and may increase the pool of genetic material to be used as biofertilizers.

  14. Salinity and phosphorus interactions on growth, yield and nutrient uptake by berseem clover (Trifolium alexandrinum L.

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    mahmood gholer ata


    Full Text Available In order to investigate the effect of different levels of salinity and phosphorus on the growth and yield of berseem clover (Trifolium alexandrinum, an experiment using a factorial experiment conducted carried out based on completely randomized block design with four levels of salinity (S1=0, 12, S2=2, S3=6 and S4=10 dS/m and two levels of phosphorus (P1=10 and P2=30 ppm with four replicates under green house conditions. Different levels of salinity have been provided from NaCl, MgCl2, Na2SO4 and MgSO4 with weight proportional respectively 2:1:1:1. The treatments of phosphorus provided from KH2PO4 sources. The traits such as growth indexes (leaf area, plant height and shoot diameter at three different stages, shoot and root dry matters, root to shoot ratio, total length of root, nutrient elements (N, P, K and Na in shoot and potassium to sodium ratio in shoot were measured. The salinity was applied using saline water with the above-mentioned electrical conductivities. Generally, by increasing salinity and phosphorus levels, all the measured traits were reduced and increased, respectively. Furthermore, at the high level of salinity, increased available phosphorus improves clover yield. So it seems that in saline soils, where there is no possibility for soil leaching and amending, application of phosphorus fertilizers can lead to a good growth and production in clover yield.

  15. Systemic colonization of clover (Trifolium repens by Clostridium botulinum strain 2301

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    Matthias eZeiller


    Full Text Available In recent years, cases of botulism in cattle and other farm animals and also in farmers increased dramatically. It was proposed, that these cases could be affiliated with the spreading of compost or other organic manures contaminated with Clostridium botulinum spores on farm land. Thus, soils and fodder plants and finally farm animals could be contaminated. Therefore, the colonization behavior and interaction of the botulinum neurotoxin (BoNT D producing C. botulinum strain 2301 and the non-toxin producing Clostridium sporogenes strain 1739 were investigated on clover (Trifolium repens in a field experiment as well as in phytochamber experiments applying axenic and additionally soil based systems under controlled conditions. Plants were harvested and divided into root and shoot parts for further DNA isolation and PCR assays; subsamples were fixed for fluorescence in situ hybridization (FISH analysis in combination with confocal laser scanning microscopy (CLSM. To target C. botulinum and C. sporogenes, 16S rDNA directed primers were used and to specifically detect C. botulinum, BoNT D toxin genes targeted primers, using a multiplex PCR approach, were applied. Our results demonstrate an effective colonization of roots and shoots of clover by C. botulinum strain 2301 and C. sporogenes strain 1739. Detailed analysis of colonization behavior showed that C. botulinum can occur as individual cells, in cell clusters and in microcolonies within the rhizosphere, lateral roots and within the roots tissue of clover. In addition, we observed significant differences in the growth behavior of clover plants when inoculated with Clostridia spores, indicating a plant growth promoting effect. Inoculated plants showed an increased growth index (shoot size, wet and dry weight and an enlarged root system, which suggests the involvement of phytohormonal effects induced by the systemic colonization of clover by C. botulinum strain 2301.

  16. Nitrogen transfer from forage legumes to nine neighbouring plants in a multi-species grassland

    DEFF Research Database (Denmark)

    Pirhofer-Walzl, Karin; Rasmussen, Jim; Jensen, Henning Høgh


    Legumes play a crucial role in nitrogen supply to grass-legume mixtures for ruminant fodder. To quantify N transfer from legumes to neighbouring plants in multi-species grasslands we established a grass-legume-herb mixture on a loamy-sandy site in Denmark. White clover (Trifolium repens L.), red...

  17. New Data on the Vertical Distribution of Some Species of the Flora in Bulgaria

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    Alexander Tashev


    Full Text Available During field studies in different floristic regions of Bulgaria in the period 2006-2013, we found localities of Stellaria alsine, Trifolium heldreichianum, Koeleria nitidula, Sieglingia decumbens, Stipa tirsa, Verbascum formanekii, Pedicularis leucodon, Saxifraga stribrnyi, Inula aschersoniana and Scilla bifolia that expand our knowledge of the vertical distribution of these species in Bulgaria, and hence their ecological niche in the country.

  18. Expression of the R2R3-MYB Transcription Factor TaMYB14 from Trifolium arvense Activates Proanthocyanidin Biosynthesis in the Legumes Trifolium repens and Medicago sativa1[W][OA (United States)

    Hancock, Kerry R.; Collette, Vern; Fraser, Karl; Greig, Margaret; Xue, Hong; Richardson, Kim; Jones, Chris; Rasmussen, Susanne


    Proanthocyanidins (PAs) are oligomeric flavonoids and one group of end products of the phenylpropanoid pathway. PAs have been reported to be beneficial for human and animal health and are particularly important in pastoral agricultural systems for improved animal production and reduced greenhouse gas emissions. However, the main forage legumes grown in these systems, such as Trifolium repens and Medicago sativa, do not contain any substantial amounts of PAs in leaves. We have identified from the foliar PA-accumulating legume Trifolium arvense an R2R3-MYB transcription factor, TaMYB14, and provide evidence that this transcription factor is involved in the regulation of PA biosynthesis in legumes. TaMYB14 expression is necessary and sufficient to up-regulate late steps of the phenylpropanoid pathway and to induce PA biosynthesis. RNA interference silencing of TaMYB14 resulted in almost complete cessation of PA biosynthesis in T. arvense, whereas Nicotiana tabacum, M. sativa, and T. repens plants constitutively expressing TaMYB14 synthesized and accumulated PAs in leaves up to 1.8% dry matter. Targeted liquid chromatography-multistage tandem mass spectrometry analysis identified foliar PAs up to degree of polymerization 6 in leaf extracts. Hence, genetically modified M. sativa and T. repens plants expressing TaMYB14 provide a viable option for improving animal health and mitigating the negative environmental impacts of pastoral animal production systems. PMID:22566493

  19. Protective effects of Trifolium alexandrinum L. against lung injury induced by environmental toxin CCl4 in experimental rats

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    Rahmat Ali Khan


    Full Text Available Background: In Pakistan numerous medicinal floras has used in the treatment of various human ailments. Among them Trifolium alexandrinum L. is traditionally used in the curing of disease. Presently we designed to ascertain the protective role of Trifolium alexandrinum methanolic extracts (TAME against carbon tetrachloride (CCl4-induced lung injury and oxidative stress in rats. Methods: Exposure to CCl4 induces oxidative stress and causes tissue damage by the induction of CCl4 free radicals. Twenty-four male albino rats were divided equally into four groups. Rats in group I had free access to drinking water and laboratory food. Group II was treated with 1 ml/kg body weight (b.w. CCl4 (30% in olive oil. Groups III and IV rats were fed (p.o. 200 mg/kg b.w. TAME and 50 mg/kg b.w. silymarin after 24 h of CCl4 treatment for 2 weeks. Results: Administration of CCl4 caused a significant (p<0.01 decrease in the activities of antioxidant enzymes (catalase, peroxidase, glutathione peroxidase, glutathione-S-transferase, and glutathione contents were decreased; however, thiobarbituric acid-reactive substances were increased (p<0.01. The alterations caused by CCl4 were significantly (p<0.01 reversed toward control levels by supplementation of TAME and silymarin. Conclusion: These results suggest that in rats TAME and silymarin could protect the lungs against CCl4-induced oxidative damage.

  20. Ditylenchus dipsaci Infestation of Trifolium repens. II. Dynamics of Infestation Development. (United States)

    Griffith, G S; Cook, R; Mizen, K A


    Trifolium repens (white clover) stolons were inoculated with Ditylenchus dipsaci (stem nematode), and the development of resulting infestations was monitored. Nematodes initially remained confined to superficial locations, concentrating in petiole axils near inoculation points. They were able to migrate slowly from the inidal inoculation points and infest adjacent axils, especially in regions near the stolon tip. As time progressed, in some axils, nematodes migrated through the stolon epidermis and colonized slowly expanding subepidermal pockets of host tissue (ca. 0.2-mm length of stolon/day). In these loci nematodes established exponentially increasing populations, but the rates of locus expansion remained constant, indicating that locus expansion was limited by unidentified host-dependent factors. As a result of increasing population pressure within subepidermal loci, J4 entered a "diapause" state and the rate of egg production by adults declined, thereby reducing rate of population growth to more sustainable levels. Typically, these populations peaked at ca. 10,000 individuals in ca. 160 days occupying 3-cm lengths of stolon. Thereafter, heavily infested regions of stolons started to die, leading to the formation of longitudinal splits in their epidermis. In other axils, nematodes did not migrate into the stolons but remained confined to axils. Some of these populations increased a hundred-fold in 95 days, with population growth ending when petioles started to die. Host plant stolon morphology was affected only when subepidermal stolon populations developed high population levels (>100 nematodes) within close proximity (axillary buds became active on previously infested nodes or when nematodes established endoparasitic populations at locations near the stolon tip during winter and spring, when the rate of stolon extension was limited by low light intensity. Affected stolon tips could "escape" from the influence of such infestations when light intensity and

  1. Does white clover (Trifolium repens abundance in temperate pastures determine Sitona obsoletus (Coleoptera: Curculionidae larval populations?

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    Mark Richard McNeill


    Full Text Available To determine if host plant abundance determined the size of clover root weevil (CRW Sitona obsoletus larval populations, a study was conducted over four years in plots sown in ryegrass (Lolium perenne (cv. Nui sown at either 6 or 30 kg/ha and white clover (Trifolium repens sown at a uniform rate of 8 kg/ha. This provided a range of % white clover content to investigate CRW population establishment and impacts on white clover survival. Larval sampling was carried out in spring (October when larval densities are near their spring peak at Lincoln (Canterbury, New Zealand with % clover measured in autumn (April and spring (September of each year. Overall, mean larval densities measured in spring 2012, 2013, 2014 and 2015 were 310, 38, 59 and 31 larvae m-2, respectively. There was a significant decline in larval populations between 2012 and 2013, but spring populations were relatively uniform thereafter. The mean % white clover measured in autumns of 2012 to 2015 was 17, 10, 3 and 11%, respectively. In comparison, mean spring % white clover from 2012 to 2015, averaged c. 5% each year. Analysis relating spring (October larval populations to % white clover measured in each plot in autumn (April found the 2012 larval population to be statistically significantly larger in the ryegrass 6 kg/ha plots than 30 kg/ha plots. Thereafter, sowing rate had no significant effect on larval populations. From 2013 to 2015, spring larval populations had a negative relationship with the previous autumn % white clover with the relationship highly significant for the 2014 data. When CRW larval populations in spring 2013 to 2015 were predicted from the 2013 to 2015 autumn % white clover, respectively, based on their positive relationship in 2012, the predicted densities were substantially larger than those observed. Conversely, when 2015 spring larval data and % clover was regressed against 2012-2014 larval populations, observed densities tended to be higher than predicted

  2. Kunitz Proteinase Inhibitors Limit Water Stress Responses in White Clover (Trifolium repens L. Plants

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    Afsana Islam


    Full Text Available The response of plants to water deficiency or drought is a complex process, the perception of which is triggered at the molecular level before any visible morphological responses are detected. It was found that different groups of plant proteinase inhibitors (PIs are induced and play an active role during abiotic stress conditions such as drought. Our previous work with the white clover (Trifolium repens L. Kunitz Proteinase Inhibitor (Tr-KPI gene family showed that Tr-KPIs are differentially regulated to ontogenetic and biotic stress associated cues and that, at least some members of this gene family may be required to maintain cellular homeostasis. Altered cellular homeostasis may also affect abiotic stress responses and therefore, we aimed to understand if distinct Tr-PKI members function during drought stress. First, the expression level of three Tr-KPI genes, Tr-KPI1, Tr-KPI2, and Tr-KPI5, was measured in two cultivars and one white clover ecotype with differing capacity to tolerate drought. The expression of Tr-KPI1 and Tr-KPI5 increased in response to water deficiency and this was exaggerated when the plants were treated with a previous period of water deficiency. In contrast, proline accumulation and increased expression of Tr-NCED1, a gene encoding a protein involved in ABA biosynthesis, was delayed in plants that experienced a previous drought period. RNAi knock-down of Tr-KPI1 and Tr-KPI5 resulted in increased proline accumulation in leaf tissue of plants grown under both well-watered and water-deficit conditions. In addition, increased expression of genes involved in ethylene biosynthesis was found. The data suggests that Tr-KPIs, particularly Tr-KPI5, have an explicit function during water limitation. The results also imply that the Tr-KPI family has different in planta proteinase targets and that the functions of this protein family are not solely restricted to one of storage proteins or in response to biotic stress.

  3. Kunitz Proteinase Inhibitors Limit Water Stress Responses in White Clover (Trifolium repens L.) Plants. (United States)

    Islam, Afsana; Leung, Susanna; Nikmatullah, Aluh; Dijkwel, Paul P; McManus, Michael T


    The response of plants to water deficiency or drought is a complex process, the perception of which is triggered at the molecular level before any visible morphological responses are detected. It was found that different groups of plant proteinase inhibitors (PIs) are induced and play an active role during abiotic stress conditions such as drought. Our previous work with the white clover (Trifolium repens L.) Kunitz Proteinase Inhibitor (Tr-KPI) gene family showed that Tr-KPIs are differentially regulated to ontogenetic and biotic stress associated cues and that, at least some members of this gene family may be required to maintain cellular homeostasis. Altered cellular homeostasis may also affect abiotic stress responses and therefore, we aimed to understand if distinct Tr-PKI members function during drought stress. First, the expression level of three Tr-KPI genes, Tr-KPI1, Tr-KPI2, and Tr-KPI5, was measured in two cultivars and one white clover ecotype with differing capacity to tolerate drought. The expression of Tr-KPI1 and Tr-KPI5 increased in response to water deficiency and this was exaggerated when the plants were treated with a previous period of water deficiency. In contrast, proline accumulation and increased expression of Tr-NCED1, a gene encoding a protein involved in ABA biosynthesis, was delayed in plants that experienced a previous drought period. RNAi knock-down of Tr-KPI1 and Tr-KPI5 resulted in increased proline accumulation in leaf tissue of plants grown under both well-watered and water-deficit conditions. In addition, increased expression of genes involved in ethylene biosynthesis was found. The data suggests that Tr-KPIs, particularly Tr-KPI5, have an explicit function during water limitation. The results also imply that the Tr-KPI family has different in planta proteinase targets and that the functions of this protein family are not solely restricted to one of storage proteins or in response to biotic stress.

  4. Chemical composition and digestibility of Trifolium exposed to elevated ozone and carbon dioxide in a free-air (FACE) fumigation system (United States)

    R.B. Muntifering; A.H. Chappelka; J.C. Lin; D.F. Karnosky; G.L. Somers


    Tropospheric ozone (O3) and carbon dioxide (CO2) are significant drivers of plant growth and chemical composition. We hypothesized that exposure to elevated concentrations of O3 and CO2, singly and in combination, would modify the chemical composition of Trifolium...

  5. Effects of white clover (Trifolium repens L.) on plant and soil nitrogen and soil organic matter in mixtures with perennial ryegrass (Lolium perenne L.).

    NARCIS (Netherlands)

    Elgersma, A.


    To increase our insight into the above- and belowground N flows in grass and grass-clover swards relations between crop and soil parameters were studied in a cutting trial with perennial ryegrass (Lolium perenne) monocultures and ryegrass-white clover (Trifolium repens) mixtures. The effects of

  6. Helmintos parásitos de anfibios: Dos Especies de Nemátodos parásitos de Bufo spinulosus trifolium (Tschudi

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    Asucena Naupay


    Full Text Available En el presente trabajo sobre los helmintos que parasitan a Bufo spinulosus trifolium (Tschudi de la localidad de Huánuco, se presentan dos especies conocidas para la ciencia pero una de ellas nueva para el Perú.

  7. Desempenho de leguminosas nativas (Adesmia e exóticas (Lotus, Trifolium, em função do estádio fenológico no primeiro corte Performance of native (Adesmia and exotic (Lotus, Trifolium legumes as for the phenological stage on first-cutting

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    Simone Meredith Scheffer-Basso


    Full Text Available Este trabalho foi desenvolvido com o objetivo de analisar aspectos fenológicos e produtivos de leguminosas nativas (Adesmia latifolia, A. tristis e exóticas (Lotus corniculatus, L. uliginosus, Trifolium repens, em função do estádio fenológico no primeiro corte: vegetativo (CEV e florescimento (CEF. As plantas foram estabelecidas em monocultura, no campo, e avaliadas entre maio/2000 e setembro/2001, em Passo Fundo, Rio Grande do Sul. Após o primeiro corte, as plantas foram desfolhadas em intervalos de 45 dias. Foram realizadas nove desfolhações no manejo CEV e sete no CEF. O estádio fenológico no primeiro corte influenciou a produção de massa seca (MS de T. repens (CEV= 9.000 kg/ha de MS, CEF = 7.000 kg/ha de MS e A. tristis (CEV = 4.000 kg/ha de MS, CEF = 8.000 kg/ha de MS. O L. corniculatus produziu cerca de 15.000 kg/ha de MS e A. latifolia, de 2.000 a 3.000 kg/ha de MS, independentemente do manejo. O L. uliginosus não floresceu, produzindo 7.000 kg/ha de MS no manejo CEV. As espécies nativas mostraram baixa persistência, com morte de plantas (A. tristis e estolões (A. latifolia no final da estação de crescimento. A maior produção de T. repens foi na primavera e a das espécies de Lotus, no verão.This work had the objective to evaluate phenological and productive aspects of native (Adesmia latifolia, A. tristis and exotics legumes (Lotus corniculatus, L. uliginosus, Trifolium repens as for the phenological stage on first-cutting: vegetative (CEV and flowering (CEF. The plants were established as monoculture in the field and evaluated between May/2000 and September/2001, in Passo Fundo, Rio Grande do Sul. After the first cutting the plants were defoliated in 45 days intervals. There were nine cuttings in CEV-management and seven in the CEF-management. The phenological stage on first-cutting modified significantly (P<0,05 the dry matter (DM production of T. repens (CEV = 9.000 kg/ha of DM, CEF = 7.000 kg/ha of DM and A

  8. New Synthetic Pyridine Derivate as Potential Elicitor in Production of Isoflavonoids and Flavonoids in Trifolium pratense L. Suspension Culture

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    Marie Kašparová


    Full Text Available The production of secondary metabolites in Trifolium pratense L. suspension culture of the family of legume plants (Fabaceae is low, and therefore there was an attempt to increase it by elicitation. New synthetic substance, 2-(2-fluoro-6-nitrobenzylsulfanylpyridine-4-carbothioamide, was tested as elicitor—a substance that showed the best elicitation effect after 48-hour application of 1 μmol L−1 concentration. Maximum contents of genistin (11.60 mg g−1 DW, daidzein (8.31 mg g−1 DW, and genistein (1.50 mg g−1 DW were recorded, and the production of these isoflavonoids thus significantly increased, when compared with the control, by 152%, 151%, and 400%. The maximum content of flavonoids (5.78 mg g−1 DW and the increase in the production by 142%, when compared with the control, were induced by 6-hour application of 100 μmol L−1 concentration. The tested substance showed to be an effective elicitor of phenylpropane metabolism.

  9. The effects of arbuscular mycorrhizal fungi and root interaction on the competition between Trifolium repens and Lolium perenne

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    Haiyan Ren


    Full Text Available Understanding the factors that alter competitive interactions and coexistence between plants is a key issue in ecological research. A pot experiment was conducted to test the effects of root interaction and arbuscular mycorrhizal fungi (AMF inoculation on the interspecies competition between Trifolium repens and Lolium perenne under different proportions of mixed sowing by the combination treatment of two levels of AMF inoculation (inoculation and non-inoculation and two levels of root interaction (root interaction and non-root interaction. Overall, the aboveground and belowground biomass of T. repens and L. perenne were not altered by AMF inoculation across planting ratios, probably because the fertile soil reduced the positive effect of AMF on plant growth. Both inter- and intraspecies root interaction significantly decreased the aboveground biomass of T. repens, but tended to increase the aboveground biomass of L. perenne across planting ratios, and thus peaked at the 4:4 polyculture. These results showed that T. repens competed poorly with L. perenne because of inter and intraspecies root interaction. Our results indicate that interspecies root interaction regulates the competitive ability of grass L. perenne and legume T. repens in mixtures and further makes great contribution for overyielding. Furthermore, AMF may not be involved in plant–plant interaction in fertile condition.

  10. New distribution data of some Pontic and submediterranean plant species in Serbia

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    Tomović Gordana M.


    Full Text Available We present here the distribution of 11 rare Pontic and submediterranean plant species in Serbia based on field research, herbarium and literature data. These taxa were mapped on 10 x 10 km2 UTM grid. The following taxa were analyzed: Dianthus pinifolius Sibth. & Sm., Doronicum hungaricum Reichenb. fil., Sedum stefco Stefanov, Sempervivum zeleborii Schott, Trifolium pignantii Fauche & Chaub., Ranunculus illyricus L., Potentilla chrysantha Trev., Prunus tenella Batsch, Saxifraga bulbifera L., Linaria pelisseriana (L Miller and Gagea bohemica (Zausc Schul. & Schul.

  11. Evaluation of Yield and Yield Components of Leek (Allium porrum L. in Intercropping with White Clover (Trifolium repens L.

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    E. Ebrahimi


    Full Text Available Introduction: Leek, Allium porrum L. is one of the most important vegetables in Europe. Open canopy up to harvest in leek field raises problem in weed management and increase nutrient leaching during vegetation period. Intercropping in leek fields causes better weed control along with the other benefits of this type of method. Intercropping leek with White clover Trifolium repens L. as a cover crop is considered, because it is known to have high ability to fix nitrogen in the soil biologically and prevent nutrient leaching during the growing season. In this study, intercropping ofleek A. porrum L. and white clover T. repens L. is evaluated. Materials and Methods This experiment was conducted in 2011 and located at the research farm Hessian State Estate Frankenhausen, Germany (51° 27′ 0″ N, 9° 25′ 0″ E,249 meter above sea level. The goal of this experiment was based on comparison between leek in intercrop system with white clover (The factors included different date of sowing composed early undersowing, sowed right after transplanting leeks and late undersowing, one month later and leek in monoculture system. In addition, different cover crop management by cutting and without cutting the clovers has been considered. In monoculture system, applying hand weeding and no-weeding was evaluated. Therefore, this experiment consisted of 6 treatments (1 and 2: early undersowing of clovers with and without cut, 3 and 4: late undersowing of clovers with and without cut, 5 and 6: monoculture with and without hand weeding with three replications and performed as a complete randomized block design. Analysis of variance, Duncan tests (P≤0.05 and orthogonal analysis wasapplied for comparison between the treatments. Results and Discussion: The comparison between treatments with cover crop indicated a significant difference (P ≤ 0.01 among treatments with early and late sowing time for clovers. Treatments with late sowed clovers (with and without cut

  12. Allelopathic effects of juglone on germination and growth of several herbaceous and woody species. (United States)

    Rietveld, W J


    Laboratory experiments were conducted to determine juglone sensitivity of 16 species (Trifolium incarnatum, Coronilla varia, Vicia villosa, Lespedeza stipulacea, L. cuneata, Acer ginnala, Caragana arbor-escens, Elaegnus angustifolia, E. umbellata, Lonicera maackii, Quercus alba, Fraxinus americana, Liriodendron tulipifera, Alnus glutinosa, Pinus strobus, andP. sylvestris) being considered for mixed plantings withJugions nigra (black walnut). All species were sensitive to juglone, but seed germination and radicle elongation were less affected than shoot elongation and dry weight accumulation. Seed germination and radicle elongation were affected by juglone in 6 and 11 species, respectively, mainly by the higher concentrations (10(-3) M and 10(-4) M). Shoot elongation and dry weight accumulation of all species were affected by juglone; many species were sensitive to concentrations as low as 10(-6) M. Seedlings of all species were severely wilted and eventually killed by 10(-3) M juglone, and most were chlorotic and severely retarded by 10(-4) M juglone. Seedlings inhibited by 10(-6) M and 10(-5) M juglone did not showany visible signs of injury. Based on the effects on seedling shoot elongation and dry weight accumulation, the five species found to be most sensitive to juglone were:Lonicera maackii, Lespedeza cuneata, Trifolium incarnatum, Alnus glutinosa, and Elaeagnus umbellata.

  13. Impacts of seedling herbivory on plant competition and implications for species coexistence (United States)

    Hanley, M. E.; Sykes, R. J.


    Background and Aims Although the causes and consequences of seedling herbivory for plant community composition are well understood, the mechanisms by which herbivores influence plant species recruitment to the established phase remain less clear. The aim was to examine how variation in the intensity of seedling herbivory interacts with growth-defence trade-offs and herbivore feeding preferences to affect plant community development. Methods Using 14-d-old seedlings of Trifolium pratense and T. repens, relative growth and susceptibility to herbivory by the snail Helix aspersa was quantified to elucidate putative growth-defence trade-offs for these species. Then mixed assemblages of 14-d-old Trifolium seedlings were exposed to herbivory by zero, two, five or ten snails and determined how variation in the intensity of herbivory affected competitive interactions into the mature phase (as measured by total plant biomass at 120 d old). Key Results In the absence of herbivory, communities were dominated by T. pratense; a result expected on the basis that it yielded larger and presumably more competitive seedlings. However, when seedlings were exposed to herbivory, the balance of competition shifted. At low levels of herbivory (two snails), both Trifolium species contributed equally to total plant biomass. More intense herbivory (five snails) resulted in almost total mortality of T. pratense and dominance of the mature community by T. repens. The most intense herbivory (ten snails) effectively removed all seedlings from the experimental community. Conclusions The study illustrates a mechanism whereby spatio-temporal fluctuations in seedling herbivory, when coupled with species-specific variation in competitive ability and sensitivity to herbivore attack, can differentially influence plant recruitment into the mature phase. This mechanism may be a key element in our attempts to understand plant species coexistence, since fluctuations in plant recruitment are fundamental to

  14. Original Article. Identification of Cercospora species in southwestern Iran

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    Behrooz Seyed Yousef


    Full Text Available Cercospora species are associated with leaf spot symptoms on various host plants. In this research, nine species of the genus on some medicinal and economic crops were found in different locations in Kohgiluyeh and Boyerahmad Provinces (southwestern Iran and examined according to morphological characteristics of stromata, conidiophores, conidiogenous cells and conidia. Results showed that Cercospora species on Cichorium intybus (C. cichorii and Nasturtium officinale (C. nasturtii are new for the mycobiota of Iran. However, characteristics of Cercospora on Plantago lanceolata are very similar to the description of C. plantaginis, but morphologically indistinguishable from C. apii s. lat. Other species have already been reported from other parts of Iran, but are new in southwestern Iran. Furthermore, Rumex crispus and Trifolium resupinatum are new hosts for C. apii and C. zebrina in Iran, respectively.

  15. Identification of six Papilionaceae species by epidermal characteristics: Microanalysis of handcomposed mixtures Identificación de seis especies de Papilionaceae mediante características epidérmicas: microanálisis de mezclas compuestas a mano

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    Cristina Yagueddú


    Full Text Available The microhistological analysis quantifies the botanical composition of herbivore diets by the identification of the epidermal characters of ingested species. Many Papilionaceae form part of herbivore diets due to their high nutritive quality. Different species of this family are sometimes grouped together due to the difficulty to recognize them. In this study, the epidermis of Lotus tenuis, Medicago arabica, Medicago lupulina, Melilotus albus, Trifolium pratense and Trifolium repens was analysed. Also, it was tested if such descriptions could be useful to identify fragments of these species in hand-composed mixtures and then quantified by microanalysis. Descriptions and drawings are presented. Regressions were significant (p0.05 for Trifolium repens. The slopes of the significant regressions did not differ from 1 (p>0.05. The identification of these species when present in herbivore faeces or in digestive tract contents is possible.El análisis microhistológico cuantifica la composición botánica de la dieta de herbívoros mediante la identificación de los caracteres epidérmicos de las especies ingeridas. Dado su alto valor nutricional, muchas Papilionaceae forman parte de la dieta de los herbívoros. Diferentes especies de esta familia son a veces agrupadas debido a la dificultad para su reconocimiento. En este trabajo se analizaron las epidermis de Lotus tenuis, Medicago arabica, Medicago lupulina, Melilotus albus, Trifolium pratense y Trifolium repens. También, se testeó si dichas descripciones podrían ser útiles para identificar fragmentos de estas especies en mezclas compuestas a mano y luego cuantificadas por microanálisis. Se presentan descripciones y dibujos. Las regresiones resultaron significativas (p0.05 para Trifolium repens. Las pendientes de las regresiones significativas no difirieron de 1 (p>0.05. La identificación de estas especies cuando están presentes en las heces o en contenidos del tracto digestivo de los herb

  16. Rôle des champignons mycorhiziens à arbuscules de zones arides dans la résistance du trèfle (Trifolium alexandrinum L.) au déficit hydrique


    Meddich, Abdelilah; Oihabi, Abdallah; Abbas, Younes; Bizid, Essia


    International audience; Effect of arbuscular mycorrhizal fungi on drought resistance of clover. Tolerance of mycorrhized clover (Trifolium alexandrinum L.) to drought depends on the arbuscular mycorrhizal fungi associated to the host plant. Five arbuscular mycorrhizal fungi isolates were collected from five Moroccan date palm grove's soils and were investigated for their ability to improve the plant tolerance to water deficit stress. Applying a constraint of 30% field capacity reduces severel...

  17. Turgor-mediated Leaf Movements in Analogy With Stomatal Function and Under the General Aspect of Water Flux Through the Plant: II. Rhythmic Transport of (86)Rb and (43)K in Trifolium repens L. and Oxalis acetosella L. (United States)

    Maier-Maercker, U


    Microautoradiographic methods were applied to trace (86)Rb and (43)K during the migration within the transpiration stream of Trifolium repens L. and Oxalis acetosella L. During the dark phase of the diurnal cycle, ions moved through the petiole to the insertion of the leaf blade. There the movement stopped. In Oxalis the ions gathered in three distinct spots at the adaxial side of the insertion, each belonging to one of the downwards bending leaflets. In Trifolium the areas of ion accumulation were two little humps at the abaxial periphery of the nodal junction of the inwardly bending leaflets. During the phases of upward movement of the leaflets, Oxalis did not reveal a specific pattern of ion distribution within the pulvinus. However, when Trifolium was loaded during the phases of leaflet opening, (86)Rb and (43)K were mainly found within the parenchymatous bundle sheath of the three laminar pulvini and their junction towards the petiole. The conclusion was that ions are stored within small cells on the flexor side and are removed from there by regulatory processes controlling water and solute flux from the sites of storage to the evaporating surfaces of the leaf blade. Implications on the interpretation of nyctinastic leaf movements are discussed. Copyright © 1984 Gustav Fischer Verlag, Stuttgart. Published by Elsevier GmbH.. All rights reserved.

  18. Prophylactic neuroprotective efficiency of co-administration of Ginkgo biloba and Trifolium pretense against sodium arsenite-induced neurotoxicity and dementia in different regions of brain and spinal cord of rats. (United States)

    Abdou, Heba M; Yousef, Mokhtar I; El Mekkawy, Desouki A; Al-Shami, Ahmed S


    The present study was carried out to evaluate the potential protective role of co-administration of Ginkgo biloba, Trifolium pretenseagainst sodium arsenite-induced neurotoxicity in different parts of brain (Cerebral cortex, Hippocampus, striatum and Hind brain) and in the spinal cord of rats. Sodium arsenite caused impairment in the acquisition and learning in all the behavioral tasks and caused significant increase in tumor necrosis factor-α,thiobarbituric acid-reactive substances andlipid profile, while caused significant decrease in glutathione, total thiol content, total antioxidant capacity, acetylcholinesterase, monoamine oxidase and ATPases activities. These results were confirmed by histopathological, fluorescence and scanning electron microscopy examination of different regions of brain. From these results sodium arsenite-induced neurodegenerative disorder in different regions of brain and spinal cord and this could be mediated through modifying the intracellular brain ions homeostasis, cholinergic dysfunction and oxidative damage. The presence of Ginkgo biloba and/orTrifolium pretense with sodium arsenite minimized its neurological damages. It was pronounced that using Ginkgo biloba and Trifolium pretense in combination was more effective as protective agents compared to use eachone of them alone. Copyright © 2016 Elsevier Ltd. All rights reserved.

  19. Effect of four plant species on soil 15N-access and herbage yield in temporary agricultural grasslands

    DEFF Research Database (Denmark)

    Pirhofer-Walzl, Karin; Eriksen, J.; Rasmussen, Jesper


    Abstract Background and aims We carried out field experiments to investigate if an agricultural grassland mixture comprising shallow- (perennial ryegrass: Lolium perenne L.; white clover: Trifolium repens L.) and deep- (chicory: Cichorium intybus L.; Lucerne: Medicago sativa L.) rooting grassland...... species has greater herbage yields than a shallow-rooting two-species mixture and pure stands, if deep-rooting grassland species are superior in accessing soil 15N from 1.2 m soil depth compared with shallow-rooting plant species and vice versa, if a mixture of deep- and shallow-rooting plant species has......-access of pure stands, two-species and four-species grassland communities. Results Herbage yield and soil 15N-access of the mixture including deep- and shallow-rooting grassland species were generally greater than the pure stands and the two-species mixture, except for herbage yield in pure stand lucerne...

  20. Effects of fescue Festuca arundinacea and/or clover Trifolium repens debris and fescue leaf leachate on clover as modified by ozone and Rhizoctonia solani

    Energy Technology Data Exchange (ETDEWEB)

    Kochhar, M.; Reinert, R.A.; Blum, U.


    Clover Trifolium repens and tall fescue Festuca arundinacea plants were exposed to ozone and inoculated with Rhizoctonia solani separately and in combination to investigate ozone/R. solani interactions on clover and tall fescue biomass, in the presence of clover and/or tall fescue debris or fescue leaf leachate. Ozone reduced biomass in clover. Rhizoctonia solani alone reduced clover biomass but the amount of this reduction was significantly greater in the presence of a single acute O/sub 3/ exposure. In the presence of multiple O/sub 3/ exposures the synergistic effect on clover biomass disappeared and the stress from R. solani was lost. The effects of O/sub 3/ and R. solani were not as pronounced on fescue as they were on clover. The debris treatments increased biomass of both clover and fescue, but the magnitude of change depended on the debris type. Leachate from fescue modified the effects of R. solani and O/sub 3/, but debris from clover and/or fescue did not. Clover plants treated with R. solani and O/sub 3/ had less biomass than control plants when stressed by leachate from fescue, but significantly greater biomass in the presence of leachate from O/sub 3/-treated fescue leaves.

  1. Plant-mediated green synthesis of silver nanoparticles using Trifolium resupinatum seed exudate and their antifungal efficacy on Neofusicoccum parvum and Rhizoctonia solani. (United States)

    Khatami, Mehrdad; Nejad, Meysam Soltani; Salari, Samira; Almani, Pooya Ghasemi Nejad


    In recent years, biosynthesis and the utilisation of silver nanoparticles (AgNPs) has become an interesting subject. In this study, the authors investigated the biosynthesis of AgNPs using Trifolium resupinatum (Persian clover) seed exudates. The characterisation of AgNPs were analysed using ultraviolet-visible spectroscopy, X-ray diffraction (XRD), transmission electron microscopy (TEM) and Fourier transform infra-red spectroscopy. Also, antifungal efficacy of biogenic AgNPs against two important plant-pathogenic fungi (Rhizoctonia solani and Neofusicoccum Parvum) in vitro condition was evaluated. The XRD analysis showed that the AgNPs are crystalline in nature and have face-centred cubic geometry. TEM images revealed the spherical shape of the AgNPs with an average size of 17 nm. The synthesised AgNPs were formed at room temperature and kept stable for 4 months. The maximum distributions of the synthesised AgNPs were seen to range in size from 5 to 10 nm. The highest inhibition effect was observed against R. solani at 40 ppm concentration of AgNPs (94.1%) followed by N. parvum (84%). The results showed that the antifungal activity of AgNPs was dependent on the amounts of AgNPs. In conclusion, the AgNPs obtained from T. resupinatum seed exudate exhibit good antifungal activity against the pathogenic fungi R. solani and N. Parvum.

  2. The ultrastructure of the mature embryo sac in the natural tetraploid of red clover (Trifolium pratense L.: that has a very low rate of seed formation

    Directory of Open Access Journals (Sweden)

    Gönül Algan


    Full Text Available In this study, ultrastructural organization of cells in the mature embryo sac of natural tetraploid Trifolium pratense L. was investigated. The mature embryo sac of this plant contains an egg cell with two synergids at the micropylar end, and a central cell with two polar nuclei. The ultrastructure of these cells agrees with what is known for most angiosperms studied with the electron microscope. The egg cell is a large and highly vacuolate cell, partially surrounded by a wall. Much of the cytoplasm is located around the nucleus at the chalazal end and there are few numbers of channel-shaped endoplasmic reticulum, mitochondria, plastids and numerous ribosomes distributed throughout the cytoplasm. Unlike the egg cell, much of the cytoplasm in synergid cells is located at micropylar part of the cell and the synergid cytoplasm contains especially, large numbers of rough endoplasmic reticulum, free ribosomes, mitochondria and plastids. The central cell of T. pratense L. contains two large polar nuclei which lie close to the egg apparatus. Each polar nucleus has a single, large, dense nucleolus that contains several nucleolar vacuoles. Much of the central cell cytoplasm consisting of granular and agranular endoplasmic reticulum, mitochondria, plastids, ribosomes, dictyosomes and lipid bodies are placed around polar nuclei.

  3. Nitrogen transfer from Lupinus albus L., Trifolium incarnatum L. and Vicia sativa L. contribute differently to rapeseed (Brassica napus L.) nitrogen nutrition. (United States)

    Génard, Thaïs; Etienne, Philippe; Laîné, Philippe; Yvin, Jean-Claude; Diquélou, Sylvain


    Nitrogen (N) transfer is well documented in legume-cereal intercropping but this is less often reported for legume-Brassica intercrops even though Brassica crops require higher levels of N fertilizers. The present study was carried out to quantify N transfer from legumes (Lupinus albus L., Trifolium incarnatum L. or Vicia sativa L.) to rapeseed (Brassica napus L.) using the split-root (15)N-labelling method. After three months we observed that legumes did not alter the growth of rapeseed. Vetch showed the lowest growth and demonstrated low (15)N shoot to root translocation and no significant N transfer to rapeseed. In contrast, significant (15)N enrichment was found in lupine and clover and (15)N was transferred to the associated rapeseed plants (around 6 and 4 mg N plant(-1), respectively), which contributed 2 to 3% of the rapeseed total N. Additionally, the data revealed that N2 fixation dominated the N nutrition in lupine despite the high N level provided in the donor compartment, suggesting a greater niche segregation between companion plants. Based on the results of this study we suggest that intercropping can be a relevant contributor to rapeseed N nutrition. Among the three legumes tested, clover and lupine seemed to be the best intercropping candidates.

  4. Nitrogen transfer from Lupinus albus L., Trifolium incarnatum L. and Vicia sativa L. contribute differently to rapeseed (Brassica napus L. nitrogen nutrition

    Directory of Open Access Journals (Sweden)

    Thaïs Génard


    Full Text Available Nitrogen (N transfer is well documented in legume-cereal intercropping but this is less often reported for legume-Brassica intercrops even though Brassica crops require higher levels of N fertilizers. The present study was carried out to quantify N transfer from legumes (Lupinus albus L., Trifolium incarnatum L. or Vicia sativa L. to rapeseed (Brassica napus L. using the split-root 15N-labelling method. After three months we observed that legumes did not alter the growth of rapeseed. Vetch showed the lowest growth and demonstrated low 15N shoot to root translocation and no significant N transfer to rapeseed. In contrast, significant 15N enrichment was found in lupine and clover and 15N was transferred to the associated rapeseed plants (around 6 and 4 mg N plant−1, respectively, which contributed 2 to 3% of the rapeseed total N. Additionally, the data revealed that N2 fixation dominated the N nutrition in lupine despite the high N level provided in the donor compartment, suggesting a greater niche segregation between companion plants. Based on the results of this study we suggest that intercropping can be a relevant contributor to rapeseed N nutrition. Among the three legumes tested, clover and lupine seemed to be the best intercropping candidates.

  5. Effect of inoculation with Penicillium albidum, a phosphate-solubilizing fungus, on the growth of Trifolium pratense cropped in a volcanic soil. (United States)

    Morales, Alfredo; Alvear, Marysol; Valenzuela, Eduardo; Rubio, Rosa; Borie, Fernando


    Volcanic soils in the south of Chile have an elevated quantity of total P, which is scarcely available due to its high P fixation capacity. One strategy for increasing the availability of P for the vegetables that grow there would be to use phosphate-solubilizing microorganisms. In one assay conducted in a greenhouse on a volcanic soil, the effect of inoculation with Penicillium albidum, a phosphate-solubilizing fungus, was studied on the growth of red clover (Trifolium pratense L). Some chemical and biological properties of the soil were also evaluated. There were three treatments: a) active inoculum [In(+)], b) inactive inoculum (autoclaved) [In(-)] and c) without inoculum [In(0)], each one done in three replicates. The In(+) significantly (P soil, available-P was not statistically different (P soil and into the plant. It is concluded that Penicillium albidum, under greenhouse conditions, in soils deficient in available P can increase the inoculation potential for volcanic soils in Chile. Anyway further studies are required, especially in organic farming where the use of soluble P fertilizer is avoided.

  6. Influence of bacterial strains isolated from lead-polluted soil and their interactions with arbuscular mycorrhizae on the growth of Trifolium pratense L. under lead toxicity. (United States)

    Vivas, A; Azcón, R; Biró, B; Barea, J M; Ruiz-Lozano, J M


    We isolated two bacterial strains from an experimentally lead (Pb)-polluted soil in Hungary, 10 years after soil contamination. These strains represented the two most abundant cultivable bacterial groups in such soil, and we tested their influence on Trifolium pratense L. growth and on the functioning of native mycorrhizal fungi under Pb toxicity in a second Pb-spiked soil. Our results showed that bacterial strain A enhanced plant growth, nitrogen and phosphorus accumulations, nodule formation, and mycorrhizal infection, demonstrating its plant-growth-promoting activity. In addition, strain A decreased the amount of Pb absorbed by plants, when expressed on a root weight basis, because of increased root biomass due to the production of indoleacetic acid. The positive effect of strain A was not only evident after a single inoculation but also in dual inoculation with arbuscular mycorrhizal fungi. Strain A also exhibited higher tolerance than strain B when cultivated under increasing Pb levels in the spiked soil. Molecular identification unambiguously placed strain A within the genus Brevibacillus. We showed that it is important to select the most tolerant and efficient bacterial strain for co-inoculation with arbuscular mycorrhizal fungi to promote effective symbiosis and thus stimulate plant growth under adverse environmental conditions, such as heavy-metal contamination.

  7. N transfer in three species grass-clover mixtures with chicory, ribwort plantain or caraway

    DEFF Research Database (Denmark)

    Dhamala, Nawa Raj; Rasmussen, Jim; Carlsson, Georg


    Red clover (Trifolium pretense L.) was grown together with perennial ryegrass (Lolium perenne L.) and one of three forb species: chicory (Cichorium intybus L.), ribwort plantain (Plantago lanceolata L.) or caraway (Carum carvi L.) in a field experiment. During the first year after the establishment, red...... to take up clover N, but biomass production and soil N acquisition was higher in chicory and plantain than in caraway. Conclusions Grass relied to a great extent on clover N, whereas forbs relied on soil N. Soil 15N-enrichment indicated that N transfer occurred in the upper soil layers...

  8. The Tr-cp 14 cysteine protease in white clover (Trifolium repens) is localized to the endoplasmic reticulum and is associated with programmed cell death during development of tracheary elements

    DEFF Research Database (Denmark)

    Mulisch, Maria; Asp, Torben; Krupinska, Karin


    Cysteine proteases are known to be associated with programmed cell death, developmental senescence and some types of pathogen and stress-induced responses. In the present study, we have characterized the cysteine protease Tr-cp 14 in white clover (Trifolium repens). Tr-cp 14 belongs to the C1A....... Immunogold studies suggest that the protease prior to the burst of the vacuole was associated to the ER cisternae. After disruption of the tonoplast, it was found in the cytoplasm, and, in later stages, associated with disintegrating material dispersed throughout the cell....

  9. Respuesta del balance iónico (ai) de especies del género Trifolium a diferentes características edáficas de sus habitats


    Martín, Amalia; Oliver, Salvador


    R E S U M E NSe ha observado la respuesta de tres especies del género Trifolium (T. cherleri, T. glomeratum y T. striatum) a las características del habitat de diferentes lugares mediante el estudio del balance iónico (ai) de la parte aérea de las mismas. Encontramos que especies agrupadas fitosociológicamente dentro de un mismo orden Helianthemetalia son muy distintas entre sí, respondiendo de forma diferente a condiciones ambientales comunes.Hemos visto cómo respondía el balance iónico (ai)...

  10. Efeito de diferentes sistemas de pastejo sobre o desempenho de suínos mantidos em pastagem de trevo-branco (Trifolium repens L. Effect of different grazing systems on the performance of pigs, in growing and finishing phases, kept on white clover (Trifolium repens L. pasture

    Directory of Open Access Journals (Sweden)

    Denyse Maria Galvão Leite


    Full Text Available Este estudo foi conduzido com o objetivo de avaliar o efeito dos sistemas de pastejo contínuo, alternado e rotativo sobre as características de desempenho de suínos (consumo de ração, ganho de peso, conversão alimentar e espessura de toucinho nas fases de crescimento e terminação mantidos em pastagem de trevo-branco (Trifolium repens L.. Foram realizadas também avaliações da disponibilidade e composição química da pastagem. Trinta e seis suínos machos foram distribuídos em um delineamento de blocos casualizados, com três tratamentos e três repetições, e doze foram mantidos em sistema de confinamento. Não foi observada influência significativa dos sistemas de pastejo sobre as características de desempenho dos animais e a disponibilidade de forragem. Entretanto, houve diferença significativa na composição química da pastagem entre os sistemas de pastejo estudados. Os suínos em sistemas de pastejo contínuo, alternado e rotativo consumiram de 13,41 a 15,92% a menos de ração e apresentaram menores ganhos de peso e espessura de toucinho que aqueles criados em confinamento. Não foram registradas diferenças significativas na conversão alimentar entre os suínos mantidos em confinamento e em pastagem.This trial was carried out to determine the effect of continuous, alternated or rotational grazing systems on the performance of pigs (feed intake, weight gain, feed conversion and backfat thickness, in the growing and finishing phases, as well as the forage availability and chemical composition of a white clover pasture (Trifolium repens L.. Thirty-six castrated pigs were allotted to a randomized complete-block experimental design with three treatments and three replications. Twelve feedlot pigs were kept on a rearing system. No significant differences were found between grazing systems on parameters of animal performance and forage on offer. However, significant differences were observed on the pasture chemical composition

  11. Identification of an extensive gene cluster among a family of PPOs in Trifolium pratense L. (red clover using a large insert BAC library

    Directory of Open Access Journals (Sweden)

    Thomas Ann


    Full Text Available Abstract Background Polyphenol oxidase (PPO activity in plants is a trait with potential economic, agricultural and environmental impact. In relation to the food industry, PPO-induced browning causes unacceptable discolouration in fruit and vegetables: from an agriculture perspective, PPO can protect plants against pathogens and environmental stress, improve ruminant growth by increasing nitrogen absorption and decreasing nitrogen loss to the environment through the animal's urine. The high PPO legume, red clover, has a significant economic and environmental role in sustaining low-input organic and conventional farms. Molecular markers for a range of important agricultural traits are being developed for red clover and improved knowledge of PPO genes and their structure will facilitate molecular breeding. Results A bacterial artificial chromosome (BAC library comprising 26,016 BAC clones with an average 135 Kb insert size, was constructed from Trifolium pratense L. (red clover, a diploid legume with a haploid genome size of 440–637 Mb. Library coverage of 6–8 genome equivalents ensured good representation of genes: the library was screened for polyphenol oxidase (PPO genes. Two single copy PPO genes, PPO4 and PPO5, were identified to add to a family of three, previously reported, paralogous genes (PPO1–PPO3. Multiple PPO1 copies were identified and characterised revealing a subfamily comprising three variants PPO1/2, PPO1/4 and PPO1/5. Six PPO genes clustered within the genome: four separate BAC clones could be assembled onto a predicted 190–510 Kb single BAC contig. Conclusion A PPO gene family in red clover resides as a cluster of at least 6 genes. Three of these genes have high homology, suggesting a more recent evolutionary event. This PPO cluster covers a longer region of the genome than clusters detected in rice or previously reported in tomato. Full-length coding sequences from PPO4, PPO5, PPO1/5 and PPO1/4 will facilitate

  12. Productividad de asociaciones de pasto ovillo (Dactylis glomerata L., ballico perenne (Lolium perenne L. y trébol blanco (Trifolium repens L.

    Directory of Open Access Journals (Sweden)

    Ever del J. Flores Santiago


    Full Text Available El objetivo del estudio fue evaluar el rendimiento de forraje de los pastos, ovillo (Dactylis glomerata L. y ballicoperenne (Lolium perenne L. en monocultivo y asociados con trébol blanco (Trifolium repens L., en su segundo añode crecimiento. Los tratamientos evaluados fueron: 20:40:40; 00:50:50; 40:20:40; 50:00:50; 20:70:10; 70:20:10,40:40:20, 100:00:00 y 00:100:00 de pasto ovillo, ballico perenne y trébol blanco, respectivamente. El diseño experimentalfue bloques al azar con tres repeticiones. Se midió rendimiento de forraje, altura de planta, radiación interceptada(RI, % y composición botánica del forraje cosechado (%. Los tratamientos se defoliaron por ovinos (Suffolk xDorset de acuerdo con la estación del año (cada cinco, seis y cuatro semanas en otoño, invierno y primavera-verano,respectivamente. Las asociaciones 00:50:50, 20:40:40, y 40:20:20 tuvieron una diferenciación mayor enrendimiento anual produciendo más del 22 % que los monocultivos de pastos y la asociación 40:40:20 quepresentaron los menores rendimientos (en promedio 15,027 kg MS ha-1. La producción estacional tuvo diferente(P<0.05 aportación durante el año; en otoño-invierno se produjo el 40 % y en primavera-verano 60 %. El trébolblanco fue la especie con mayor porcentaje del forraje cosechado (44 % seguida por pasto ovillo (39 % yballico perenne (17 %. En conclusión, algunas asociaciones superaron el rendimiento de los pastos en monocultivo,existiendo diferencias también en la distribución estacional de la producción de forraje. La intercepción deradiación y altura de la planta son indicativos del rendimiento, y por tanto del momento de cosecha.

  13. Egyptian plant species as new ozone indicators

    Energy Technology Data Exchange (ETDEWEB)

    Madkour, S.A.; Laurence, J.A


    Of more than 30 species of plants from Egypt screened for sensitivity to ozone, four were found to be suitable for use as bioindicators. - The aim of this study was to test and select one or more highly sensitive, specific and environmentally successful Egyptian bioindicator plants for ozone (O{sub 3}). For that purpose more than 30 Egyptian species and cultivars were subjected to extensive screening studies under controlled environmental and pollutant exposure conditions to mimic the Egyptian environmental conditions and O{sub 3} levels in urban and rural sites. Four plant species were found to be more sensitive to O{sub 3} than the universally used O{sub 3}-bioindicator, tobacco Bel W3, under the Egyptian environmental conditions used. These plant species, jute (Corchorus olitorius c.v. local), clover (Trifolium alexandrinum L. c.v. Masry), garden rocket (Eruca sativa c.v. local) and alfalfa (Medicago sativa L. c.v. local), ranked in order of decreasing sensitivity, exhibited typical O{sub 3} injury symptoms faster and at lower O{sub 3} concentrations than Bel W3. Three variables were tested in search of a reliable tool for the diagnosis and prediction of O{sub 3} response prior to the appearance of visible foliar symptoms: pigment degradation, stomatal conductance (g{sub s}) and net photosynthetic CO{sub 2} assimilation (P{sub net}). Pigment degradation was found to be unreliable in predicting species sensitivity to O{sub 3}. Evidence supporting stomatal conductance involvement in O{sub 3} tolerance was found only in tolerant species. A good correlation was found between g{sub s}, restriction of O{sub 3} and CO{sub 2} influx into the mesophyll tissues, and P{sub net}. Changes in P{sub net} seemed to depend largely on fluctuations in g{sub s}.

  14. Growth response to ozone of annual species from Mediterranean pastures. (United States)

    Gimeno, B S; Bermejo, V; Sanz, J; de la Torre, D; Elvira, S


    Ozone (O3) phytotoxicity has been reported on a wide range of plant species. However, scarce information has been provided regarding the sensitivity of semi-natural grassland species, especially those from dehesa Mediterranean grasslands, in spite of their great biological diversity and the high O3 levels recorded in the region. A screening study was carried out in open-top chambers (OTCs) to assess the O3-sensitivity of representative therophytes of these ecosystems based on the response of selected growth-related parameters. Three O3 treatments and 3 OTCs per treatment were used. Legume species were very sensitive to O3, because 78% of the tested species showed detrimental effects on their total biomass relative growth rate (RGR) following their exposure to O3. The Trifolium genus was particularly sensitive showing O3-induced adverse effects on most of the assessed parameters. Gramineae plants were less sensitive than Leguminosae species because detrimental effects on total biomass RGR were only observed in 14% of the assessed species. No relationship was found between relative growth rates when growing in clean air and O3 susceptibility. The implications of these effects on the performance of dehesa acidic grasslands and on the definition of ozone critical levels for the protection of semi-natural vegetation are discussed. Copyright 2004 Elsevier Ltd.

  15. Arbuscular mycorrhizae of dominant plant species in Yungas forests, Argentina. (United States)

    Becerra, Alejandra G; Cabello, Marta; Zak, Marcelo R; Bartoloni, Norberto


    In Argentina the Yungas forests are among the ecosystems most affected by human activity, with loss of biodiversity. To assess the arbuscular mycorrhizal (AM) colonization and the arbuscular mycorrhizal fungi (AMF) spore numbers in these ecosystems, the roots of the most dominant native plants (one tree, Alnus acuminata; three herbaceous, Duchesnea indica, Oxalis conorrhiza, Trifolium aff. repens; and one shrub, Sambucus peruviana) were studied throughout the year from two sites of Yungas forests. Assessments of mycorrhizal colonization (percent root length, intraradical structures) were made by washing and staining the roots. Soil samples of each plant species were pooled and subsamples were obtained to determine AM spore numbers. The herbaceous species formed both Arum- and Paris-type morphologies, whereas the tree and the shrub species formed respectively single structural types of Arum- and Paris-type. AM colonization, intraradical fungi structures and AMF spore numbers displayed variation in species, seasons and sites. D. indica showed the highest AM colonization, whereas the highest spore numbers was observed in the rhizosphere of A. acuminata. No correlation was observed between spore numbers and root length percentage colonized by AM fungi. Results of this study showed that Alnus acuminata is facultatively AM. The AM colonization, intraradical fungi structures and AMF spore numbers varied in species depending on phenological, climatic and edaphic conditions.

  16. Weed Suppression by Seven Clover Species

    Energy Technology Data Exchange (ETDEWEB)

    Ross, Shirley M.; King, Jane R.; Izaurralde, R Cesar C.; O' Donovan, John T.


    Used as cover crops, clover species may differ in their ability to suppress weed growth. Field trials were conducted in Alberta, Canada to measure the growth of brown mustard [Brassica juncea (L.) Czern.], in mowed and nonmowed production, as influenced by alsike (Trifolium hybridum L.), balansa [T. michelianum Savi var. balansae (Boiss.) Azn.], berseem (T. alexandrinum L.), crimson [T. incarnatum (Boiss.) Azn.], berseem (T. alexandrinum L.), crimson (T. incarnatum L.), Persian (T. resupinatum L.), red (T. pratense L.), and white Dutch (T. repens L.) clover and fall rye (Secale cereale L.). In 1997, clovers reduced mustard biomass in nonmowed treatments by 29% on a high- fertility soil (Typic Cryoboroll) at Edmonton and by 57% on a low- fertility soil (Typic Cryoboralf) at Breton. At Edmonton, nonmowed mustard biomass was reduced by alsike and berseem clover in 1996 and by alsike, balansa, berseem, and crimson clover in 1997. At Breton, all seven clover species suppressed weed biomass. A negative correlation was noted among clover and mustard biomass at Edmonton but not at Breton. The effects of mowing varied with location, timing, and species. Mowing was beneficial to crop/weed proportion at Edmonton but not at Breton. Mowing at early flowering of mustard large-seeded legumes and sweetclover (Melilotus offici) produced greater benefit than mowing at late flowering. With early mowing, all clover species suppressed mustard growth at Edmonton. Clovers reduced mustard regrowth (g plant21 ) and the number of mustard plants producing regrowth. The characteristics of berseem clover (upright growth, long stems, high biomass, and late flowering) would support its use as a cover crop or forage in north-central Alberta.

  17. Assessment of the effects of ozone exposure and plant competition on the reproductive ability of three therophytic clover species from Iberian pastures (United States)

    Gimeno, B. S.; Bermejo, V.; Sanz, J.; de la Torre, D.; Gil, J. M.

    Ozone (O 3) phytototoxicity has been reported on a wide range of crops and wild Central European plant species, however no information has been provided regarding the sensitivity of plant species from dehesa Mediterranean therophytic grasslands in spite of their great plant species richness and the high O 3 levels that are recorded in this area. A study was carried out in open-top chambers (OTCs) to assess the effects of O 3 and competition on the reproductive ability of three clover species: Trifolium cherleri, Trifolium subterraneum and Trifolium striatum. A phytometer approach was followed, therefore plants of these species were grown in mesoscosms composed of monocultures of four plants of each species, of three plants of each species competing against a Briza maxima individual or of a single plant of each clover species competing with three B. maxima plants. Three O 3 treatments were adopted: charcoal filtered air (CFA), non-filtered air (NFA) and non-filtered air supplemented with 40 nl l -1 of O 3 (NFA+). The different mesocosms were exposed to the different O 3 treatments for 45 days and then they remained in the open. Ozone exposure caused reductions in the flower biomass of the three clover species assessed. In the case of T. cherleri and T. subterraneum this effect was found following their exposure to the different O 3 treatments during their vegetative period. An attenuation of these effects was found when the plants remained in the open. Ozone-induced detrimental effects on the seed output of T. striatum were also observed. The flower biomass of the clover plants grown in monocultures was greater than when competing with one or three B. maxima individuals. An increased flower biomass was found in the CFA monoculture mesocosms of T. cherleri when compared with the remaining mesocosms, once the plants were exposed in the open for 60 days. The implications of these effects on the performance of dehesa acid grasslands and for the definition of O 3

  18. Root foraging for Patchy Phosphorus of Plant Species with Contrasting Foraging Strategy - Role of Roots and Mycorrhiza (United States)

    Felderer, B.; Robinson, B. H.; Jansa, J.; Vontobel, P.; Frossard, E.; Schulin, R.


    Plant nutrients are distributed heterogeneously in soil. Thus the nutrient distribution together with nutrient availability, temporal and spatial development of roots determine nutrient uptake by the plants. Plants have developed several strategies to cope with the patchy nutrient distribution. Preferential root development within nutrient-enriched patches is a prominent response to heterogeneous nutrient distribution. This capacity to precisely allocate roots is called morphological plasticity and is highly variable between plant species. Another strategy is the increased nutrient uptake per unit of root surface in the nutrient-rich patches as compared to root zones outside such patches, so-called physiological plasticity . Additionally, enhanced nutrient uptake from nutrient-rich patches might be supported by increased production of mycorrhizal extraradical hyphae. We refer to this phenomenon as plastic response of the mycorrhiza-plant association. Relative importance for nutrient acquisition of these responses to heterogeneous nutrient distribution might vary between plant species. However, quantitative data are very rare. We will investigate nutrient acquisition and root development over time in sandy substrate with heterogeneous phosphorus (P) distribution of two model plant species with different nutrient foraging strategies (Lotus corniculatus, Trifolium arvense). These plant species are characterized by high and low morphological plasticity, respectively (according to results of preliminary experiments). We follow three main goals in a single mesocosm experiment, where P is to be homogeneously or patchily distributed in a sandy substrate: 1. - Imaging of root architecture of Lotus corniculatus and Trifolium arvense on a time line. 2. - Assessment of the physiological plasticity of Lotus corniculatus and Trifolium arvense 3. - Determination of the plasticity of mycorrhiza-plant association of Lotus corniculatus and Trifolium arvense associated with either of

  19. Endangered Species (United States)

    EPA's Endangered Species Protection Program helps promote recovery of listed species. The ESPP determines if pesticide use in a geographic area may affect any listed species. Find needed limits on pesticide use in Endangered Species Protection Bulletins.

  20. Elevated CO2 and plant species diversity interact to slow root decomposition

    Energy Technology Data Exchange (ETDEWEB)

    De Graaff, Marie-Anne [ORNL; Schadt, Christopher Warren [ORNL; Rula, Kelly L [ORNL; Six, Johan W U A [University of California, Davis; Schweitzer, Jennifer A [ORNL; Classen, Aimee T [University of Tennessee, Knoxville (UTK)


    Changes in plant species diversity can result in synergistic increases in decomposition rates, while elevated atmospheric CO2 can slow the decomposition rates; yet it remains unclear how diversity and changes in atmospheric CO2 may interact to alter root decomposition. To investigate how elevated CO2 interacts with changes in root-litter diversity to alter decomposition rates, we conducted a 120-day laboratory incubation. Roots from three species (Trifolium repens, Lespedeza cuneata, and Festuca pratense) grown under ambient or elevated CO2 were incubated individually or in combination in soils that were exposed to ambient or elevated CO2 for five years. Our experiment resulted in two main findings: (1) Roots from T. repens and L. cuneata, both nitrogen (N) fixers, grown under elevated CO2 treatments had significantly slower decomposition rates than similar roots grown under ambient CO2 treatments; but the decomposition rate of F. pratense roots (a non-N-fixing species) was similar regardless of CO2 treatment. (2) Roots of the three species grown under ambient CO2 and decomposed in combination with each other had faster decomposition rates than when they were decomposed as single species. However, roots of the three species grown under elevated CO2 had similar decomposition rates when they were incubated alone or in combination with other species. These data suggest that if elevated CO2 reduces the root decomposition rate of even a few species in the community, it may slow root decomposition of the entire plant community.

  1. Comportamento de adubos verdes de inverno na região serrana fluminense Behaviour of temperate green manure species in a mountain region of the Rio de Janeiro State, Brazil

    Directory of Open Access Journals (Sweden)

    Carlos Antonio Almeida Barradas


    Full Text Available O objetivo deste trabalho foi o de avaliar o comportamento de espécies de adubos verdes de inverno, em um Cambissolo Háplico Tb distrófico, sob duas condições de fertilidade, a 1.100 m de altitude. Dois experimentos de campo foram conduzidos em Nova Friburgo, RJ, utilizando as seguintes espécies: aveia-preta (Avena strigosa Schieb., azevém-anual (Lollium multiflorum Lam., chícharo (Lathyrus sativus L., ervilhaca-comum (Vicia sativa L., ervilhaca-peluda (Vicia villosa Roth, utilizada somente no segundo experimento, serradela-flor-rosa (Ornithopus sativus Brot., tremoço-amarelo (Lupinus luteus L., tremoço-branco cultivar Comum (Lupinus albus L., tremoço-branco cultivar Multo Lupa Doce (Lupinus albus L., tremoço-branco cultivar TRM 881 (Lupinus albus L., trevo-branco (Trifolium repens L., trevo-vermelho cultivar Achylesmarium (Trifolium pratense L., e trevo-vesiculoso cultivar Jacuí 52 (Trifolium vesiculosum Savi. O delineamento experimental foi em blocos ao acaso, com três repetições. As espécies que mais se destacaram na produção de massa seca e acumulação de N na parte aérea, sob condições de boa fertilidade no solo, foram as três cultivares de tremoço-branco, o tremoço-amarelo, a ervilhaca-comum e a aveia-preta. Sob condições de baixo teor de P, Ca e Mg no solo, as que mais se destacaram foram as três cultivares de tremoço-branco e a aveia-preta.The objective of this work was to evaluate the behaviour of temperate green manure species in an Inceptisol with two different fertility levels, in an area of high elevation (1,100 m. Two field experiments were carried out in Nova Friburgo County, Rio de Janeiro State, Brazil, with the following species: Avena strigosa Schieb., Lollium multiflorum Lam., Lathyrus sativus L., Vicia sativa L., Vicia villosa Roth, used in the 2nd experiment only, Ornithopus sativus Brot., Lupinus luteus L., Lupinus albus L. cv. Comum, cv. Multo Lupa Doce and cv. TRM 881, Trifolium repens L

  2. Els lepidòpters de la vall d’Alinyà (Alt Urgell, NE de la península Ibèrica: algunes consideracions sobre l’altitud i la classificació biogeogràfica

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    Vallhonrat, F.


    Full Text Available The Lepidoptera of the Alinyà valley (Alt Urgell, NE Iberian peninsula: some remarks about altitude and biogeographical classification Results from the census on Lepidoptera fauna carried out in Alinyà valley during years 2000 and 2001 (see annex show few significant differences in the altitudinal range between Mediterranean and Eurasiatic species.

  3. The fungi communities of the soil environment of Triticum aestivum and its forecrops: Hordeum vulgare, Vicia faba ssp. minor and Trifolium pratense

    Directory of Open Access Journals (Sweden)

    Elżbieta Pląskowska


    Full Text Available The species spectrum and abundance of the fungi communities were affected by the soil environment developed by wheat and its forecrops, and by atmospheric conditions. The fungi of the genus Fusarium were the greatest threat to winter wheat regardless of the forecrop. The field bean was the best forecrop to the wheat whereas spring barley was the worst.

  4. Growth response to ozone of annual species from Mediterranean pastures

    Energy Technology Data Exchange (ETDEWEB)

    Gimeno, B.S. [Ecotoxicology of Air Pollution, CIEMAT (ed. 70), Avda, Complutense 22, 28040 Madrid (Spain)]. E-mail:; Bermejo, V. [Ecotoxicology of Air Pollution, CIEMAT (ed. 70), Avda, Complutense 22, 28040 Madrid (Spain)]. E-mail:; Sanz, J. [Ecotoxicology of Air Pollution, CIEMAT (ed. 70), Avda, Complutense 22, 28040 Madrid (Spain)]. E-mail:; Torre, D. de la [Ecotoxicology of Air Pollution, CIEMAT (ed. 70), Avda, Complutense 22, 28040 Madrid (Spain)]. E-mail:; Elvira, S. [Ecotoxicology of Air Pollution, CIEMAT (ed. 70), Avda, Complutense 22, 28040 Madrid (Spain)]. E-mail:


    Ozone (O{sub 3}) phytotoxicity has been reported on a wide range of plant species. However, scarce information has been provided regarding the sensitivity of semi-natural grassland species, especially those from dehesa Mediterranean grasslands, in spite of their great biological diversity and the high O{sub 3} levels recorded in the region. A screening study was carried out in open-top chambers (OTCs) to assess the O{sub 3}-sensitivity of representative therophytes of these ecosystems based on the response of selected growth-related parameters. Three O{sub 3} treatments and 3 OTCs per treatment were used. Legume species were very sensitive to O{sub 3}, because 78% of the tested species showed detrimental effects on their total biomass relative growth rate (RGR) following their exposure to O{sub 3}. The Trifolium genus was particularly sensitive showing O{sub 3}-induced adverse effects on most of the assessed parameters. Gramineae plants were less sensitive than Leguminosae species because detrimental effects on total biomass RGR were only observed in 14% of the assessed species. No relationship was found between relative growth rates when growing in clean air and O{sub 3} susceptibility. The implications of these effects on the performance of dehesa acidic grasslands and on the definition of ozone critical levels for the protection of semi-natural vegetation are discussed. - Capsule: The therophytes from dehesa acidic pastures of central of the Iberian peninsula present a great sensitivity to ozone, as derived from growth- and biomass-related variables.

  5. Assessment of lipoxygenase activity in seed extracts from 35 plant species

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    Fauconnier, M. L.


    Full Text Available Lipoxygenase activity in 35 seed extracts was determined on the basis of hydroperoxide synthesis using linoleic acid as substrate. The results referring to the extracted protein content show that several species of Vigna (V. unguiculata, V. radiata and V. mungo and one of Trifolium exhibit stronger lipoxygenase activity than soybean enzyme extracts. The pH activity relationship was also established for 4 very active samples. GC-MS analysis revealed equal amounts of 9- and 13- hydroperoxides of linoleic acid in these seed extracts, indicating no enzyme positional specificity.

    Se ha determinado la actividad lipoxigenasa en 35 extractos de semilla en base a la síntesis de hidroperóxido usando ácido linoleico como sustrato. Los resultados referidos al contenido en proteína extraídos mostraron que varias especies de Vigna (V. unguiculata, V. radiata y V. mungo además de una de Trifolium, exhibieron mayor actividad lipoxigenasa que los extractos enzimáticos de soja. La relación entre la actividad-pH se ha establecido para 4 muestras muy activas. El análisis por GC-MS de estos extractos de semillas, mostró cantidades iguales de los hidroperóxidos 9- y 13 del ácido linoleico indicando la no especificidad posicional de la enzima.

  6. Increased plant carbon translocation linked to overyielding in grassland species mixtures.

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    Gerlinde B De Deyn

    Full Text Available Plant species richness and productivity often show a positive relationship, but the underlying mechanisms are not fully understood, especially at the plant species level. We examined how growing plants in species mixture influences intraspecific rates of short-term carbon (C- translocation, and determined whether such short-term responses are reflected in biomass yields. We grew monocultures and mixtures of six common C3 grassland plant species in outdoor mesocosms, applied a (13C-CO(2 pulse in situ to trace assimilated C through plants, into the soil, and back to the atmosphere, and quantified species-specific biomass. Pulse derived (13C enrichment was highest in the legumes Lotus corniculatus and Trifolium repens, and relocation (i.e. transport from the leaves to other plant parts of the recently assimilated (13C was most rapid in T. repens grown in 6-species mixtures. The grass Anthoxanthum odoratum also showed high levels of (13C enrichment in 6-species mixtures, while (13C enrichment was low in Lolium perenne, Plantago lanceolata and Achillea millefolium. Rates of C loss through respiration were highest in monocultures of T. repens and relatively low in species mixtures, while the proportion of (13C in the respired CO(2 was similar in monocultures and mixtures. The grass A. odoratum and legume T. repens were most promoted in 6-species mixtures, and together with L. corniculatus, caused the net biomass increase in 6-species mixtures. These plant species also had highest rates of (13C-label translocation, and for A. odoratum and T. repens this effect was greatest in plant individuals grown in species mixtures. Our study reveals that short-term plant C translocation can be accelerated in plant individuals of legume and C3 grass species when grown in mixtures, and that this is strongly positively related to overyielding. These results demonstrate a mechanistic coupling between changes in intraspecific plant carbon physiology and increased

  7. Near-full length sequencing of 16S rDNA and RFLP indicates that Rhizobium etli is the dominant species nodulating Egyptian winter Berseem clover (Trifolium alexandrinum L.). (United States)

    Shamseldin, Abdelaal; Moawad, Hassan; Abd El-Rahim, Wafaa M; Sadowsky, Michael J


    Egyptian winter Berseem clover (EWBC) is one of the main important forage legume crops in Egypt that is used for animal feeding in winter and it occupies about 2.5 million feddans (Feddan=4200m(2)) in winter agricultural rotation systems. Forty-eight rhizobial isolates that nodulated this legume host from different geographical regions within Egypt were isolated. RFLP analyses of 16S rDNA (1.5kb) and whole ribosomal DNA (5kb), the sequencing of 16S rDNA, and the sequencing of nodC, nifH and house keeping genes were used to identify these isolates. The RFLP analysis of 16S rDNA (1.5kb) among 15 representative strains with three enzymes generated two genotypes. The largest genotype was similar to Rhizobium etli CFN42T (93.33%) except for strain 902 that failed to re-nodulate EWBC. RFLP analysis of complete ribosomal DNA (5kb) produced five genotypes. The majority of tested strains shared the genotype with R. etli CFN42T (53.33%). Only one strain (1002) shared the genotype with Rhizobium leguminosarum sv. trifolii 3023. The other four strains were comprised of two unique genotypes. Phylogenetic analysis of 16S rDNA sequences revealed that seven representative strains could be divided into two genetic clusters sharing the ancestral clad with R. etli CFN42T. A phylogenetic tree based on nodC gene sequence confirmed that all the examined strains shared the genetic lineage with R. leguminosarum sv. trifolii WSM1325. The phylogenetic trees of house keeping genes are supported strongly the identification of majority of strains as a novel symbiovar of R. etli with new lineages. Copyright © 2013 Elsevier GmbH. All rights reserved.

  8. Effects of the arbuscular mycorrhizal fungus Glomus mosseae on growth and metal uptake by four plant species in copper mine tailings

    Energy Technology Data Exchange (ETDEWEB)

    Chen, B.D. [Department of Soil Environmental Science, Research Center for Eco-environmental Sciences, Chinese Academy of Sciences, Beijing, 100085 (China)]. E-mail:; Zhu, Y.-G. [Department of Soil Environmental Science, Research Center for Eco-environmental Sciences, Chinese Academy of Sciences, Beijing, 100085 (China); Duan, J. [Department of Soil Environmental Science, Research Center for Eco-environmental Sciences, Chinese Academy of Sciences, Beijing, 100085 (China); Xiao, X.Y. [Department of Soil Environmental Science, Research Center for Eco-environmental Sciences, Chinese Academy of Sciences, Beijing, 100085 (China); Smith, S.E. [Centre for Soil-Plant Interactions, School of Earth and Environmental Sciences, Waite Campus, University of Adelaide, South Australia 5005 (Australia)


    A greenhouse experiment was conducted to evaluate the potential role of arbuscular mycorrhizal fungi (AMF) in encouraging revegetation of copper (Cu) mine tailings. Two native plant species, Coreopsis drummondii and Pteris vittata, together with a turf grass, Lolium perenne and a leguminous plant Trifolium repens associated with and without AMF Glomus mosseae were grown in Cu mine tailings to assess mycorrhizal effects on plant growth, mineral nutrition and metal uptake. Results indicated that symbiotic associations were successfully established between G. mosseae and all plants tested, and mycorrhizal colonization markedly increased plant dry matter yield except for L. perenne. The beneficial impacts of mycorrhizal colonization on plant growth could be largely explained by both improved P nutrition and decreased shoot Cu, As and Cd concentrations. The experiment provided evidence for the potential use of local plant species in combination with AMF for ecological restoration of metalliferous mine tailings. - This study demonstrated that AM associations can encourage plant survival in Cu mine tailings.

  9. The effect of plant growth promoting rhizobacteria (PGPR on quantitative and qualitative characteristics of Sesamum indicum L. with application of cover crops of Lathyrus sp. and Persian clover (Trifolium resopinatum L.

    Directory of Open Access Journals (Sweden)

    M. Jahan


    Full Text Available Cover crops cultivation and application of plant growth rhizobacteria are the key factors to enhance agroecosystem health. A field experiment was conducted at the Research Farm of Faculty of Agriculture, Ferdowsi University of Mashhad, Iran, during growing season of 2009-2010. A split plot arrangement based on a complete randomized block design with three replications was used. Cultivation and no cultivation of Lathyrus sp. and Persian clover (Trifolium resopinatum in autumn assigned to the main plots. The sub plot factor consisted of three different types of biofertilizers plus control, including 1-nitroxin (containing of Azotobacter sp. and Azospirillum sp., 2- phosphate solubilizing bacteria (PSB (containing of Bacillus sp. and Pseudomonas sp., 3- biosulfur (containing of Thiobacillus ssp. and 4- control (no fertilizer. The results showed the effect of cover crops on seed number and seed weight per plant, biological and seed yield was significant, as the seed yield increased of 9 %. In general, biofertilizers showed superiority due to the most studied traits compared to control. Nitroxin, PSB and biosulfur increased biological yield of 44, 28 and 26 % compared to control, respectively. Cover crops and biofertilizers interactions, showed significant effect on all studied traits, as the highest and the lowest harvest index resulted in cover crop combined with biofertilizers (22.1% and cultivation and no cultivation of cover crops combined with control (15.3%, respectively. The highest seed oil and protein content resulted from cover crops plus biofertilizers (42.4% and cover crops plus PSB (22.5%, respectively. In general, the results showed cover crops cultivation in combination with biofertilizers application could be an ecological alternative for chemical fertilizers, in addition of achieving advantages of cover crops. According to the results, it should be possible to design an ecological cropping system and produce appropriate and healthy

  10. Invasive Species (United States)

    Invasive species have significantly changed the Great Lakes ecosystem. An invasive species is a plant or animal that is not native to an ecosystem, and whose introduction is likely to cause economic, human health, or environmental damage.

  11. Intra- and interspecific molecular polymorphism of thrips species. (United States)

    Bayar, K; Törjék, O; Kiss, Erzsébet; Gyulai, G; Heszky, L


    Molecular polymorphism of six species of Thysanoptera of both sexes, collected from different locations and host plants in Hungary was studied by using RAPD-PCR technique. The specimens were classified according to sampling sites (Gödöllö, Nagykovácsi and Valkó), host plants (Lathyrus tuberosus, Medicago sativa, Taraxacum officinale, Trifolium pratense), sexes, and larvae in case of Aeolothrips intermedius. On the basis of the total of 103 fragments generated by 15 RAPD primers the genetic distances were calculated by cluster analysis using simple matching method. The dendrogram resulted in two main groups: Aeolothripidae (Aeolothrips intermedius) and Thripidae (Frankliniella intonsa, Kakothrips robustus, Odontothrips confusus, Thrips dilatatus and T. tabaci). Within the family Thripidae two subgroups were observed including (i) F. intonsa, T. dilatatus and T. tabaci, and (ii) K. robustus and O. confusus. Two population-specific and one sex-linked fragments were identified by the RAPD primers, OPQ 14, NO11 and OPA08, respectively.

  12. Assessment of the ozone sensitivity of 22 native plant species from Mediterranean annual pastures based on visible injury (United States)

    Bermejo, V.; Gimeno, B. S.; Sanz, J.; de la Torre, D.; Gil, J. M.

    Ozone (O 3) phytototoxicity has been reported on a wide range of plant species, inducing the appearance of specific foliar injury or increasing leaf senescence. No information regarding the sensitivity of plant species from dehesa Mediterranean grasslands has been provided in spite of their great biological diversity. A screening study was carried out in open-top chambers (OTCs) to assess the O 3-sensitivity of 22 representative therophytes of these ecosystems based on the appearance and extent of foliar injury. A distinction was made between specific O 3 injury and non-specific discolorations. Three O 3 treatments (charcoal-filtered air, non-filtered air and non-filtered air supplemented with 40 nl l -1 O 3 during 5 days per week) and three OTCs per treatment were used. The Papilionaceae species were more sensitive to O 3 than the Poaceae species involved in the experiment since ambient levels induced foliar symptoms in 67% and 27%, respectively, of both plant families. An O 3-sensitivity ranking of the species involved in the assessment is provided, which could be useful for bioindication programmes in Mediterranean areas. The assessed Trifolium species were particularly sensitive since foliar symptoms were apparent in association with O 3 accumulated exposures well below the current critical level for the prevention of this kind of effect. The exposure indices involving lower cut-off values (i.e. 30 nl l -1) were best related with the extent of O 3-induced injury on these species.

  13. Latent and active polyphenol oxidase (PPO) in red clover (Trifolium pratense) and use of a low PPO mutant to study the role of PPO in proteolysis reduction. (United States)

    Winters, Ana L; Minchin, Frank R; Michaelson-Yeates, Terry P T; Lee, Michael R F; Morris, Phillip


    Polyphenol oxidase (PPO) activity in leaf extracts of wild type (WT) red clover and a mutant line expressing greatly reduced levels of PPO (LP red clover) has been characterized. Both latent and active forms of PPO were present, with the latent being the predominant form. PPO enzyme and substrate (phaselic acid) levels fluctuated over a growing season and were not correlated. Protease activation of latent PPO was demonstrated; however, the rate was too low to have an immediate effect following extraction. A novel, more rapid PPO activation mechanism by the enzyme's own substrate was identified. Rates of protein breakdown and amino acid release were significantly higher in LP red clover extracts compared with WT extracts, with 20 versus 6% breakdown of total protein and 1.9 versus 0.4 mg/g FW of free amino acids released over 24 h, respectively. Inclusion of ascorbic acid increased the extent of protein breakdown. Free phenol content decreased during a 24 h incubation of WT red clover extracts, whereas protein-bound phenol increased and high molecular weight protein species were formed. Inhibition of proteolysis occurred during wilting and ensilage of WT compared with LP forage (1.9 vs 5 and 17 vs 21 g/kg of DM free amino acids for 24 h wilted forage and 90 day silage, respectively). This study shows that whereas constitutive red clover PPO occurs predominantly in the latent form, this fraction can contribute to reducing protein breakdown in crude extracts and during ensilage.

  14. The influence of aspect on the early growth dynamics of hydroseeded species in coal reclamation areas

    Energy Technology Data Exchange (ETDEWEB)

    Gonzalez-Alday, J.; Marrs, R.H.; Martinez-Ruiz, C. [University of Valladolid, Palencia (Spain)


    Question: Does aspect affect hydroseeding success and the development of vegetation during early vegetation establishment on the steep slopes of coal wastes during the reclamation process? Location: Open-pit coal mine near Villanueva de la Pena, northern Spain. Methods: In the first year after hydroseeding, we monitored the dynamics of hydroseeded species in three permanent plots of 20 m{sup 2} on north- and south-facing slopes every two months. Soil properties and weather conditions were also monitored. Aspect was related to total plant cover during early revegetation, and south-facing slopes had the lowest cover. Aspect also influenced the early dynamics of hydroseeded grasses and legumes establishing on these slopes. Grass cover was greater on the north slope throughout the study, but differences in plant cover between north and south slopes appeared later for the legumes. Aspect also affected the relative contribution of both of grasses and legumes to the total plant cover, with grasses dominant on both northern and southern slopes, except during the summer on the southern slope. The species with the greatest difference in cover between the north- and south-facing slopes were Festuca spp., Lolium perenne and Trifolium repens. In coal mine reclamation areas of Mediterranean climates, differences in the development of hydroseeded species depended on the slope of the coal mine reclamation areas, and this information is of importance to managers in selecting species for use in reclamation.

  15. Assessment of nickel bioavailability through chemical extractants and red clover (Trifolium pratense L.) in an amended soil: Related changes in various parameters of red clover. (United States)

    Shahbaz, Ali Khan; Iqbal, Muhammad; Jabbar, Abdul; Hussain, Sabir; Ibrahim, Muhammad


    Application of immobilizing agents may efficiently reduce the bioavailability of nickel (Ni) in the soil. Here we report the effect of biochar (BC), gravel sludge (GS) and zeolite (ZE) as a sole treatment and their combinations on the bioavailability of Ni after their application into a Ni-polluted soil. The bioavailability of Ni after the application of immobilizing agents was assessed through an indicator plant (red clover) and chemical indicators of bioavailability like soil water extract (SWE), DTPA and Ca(NO3)2 extracts. Additionally, the effects of Ni bioavailability and immobilizing agents on the growth, physiological and biochemical attributes of red clover were also observed. Application of ZE significantly reduced Ni concentrations in all chemical extracts compared to rest of the treatments. Similarly, the combined application of BC and ZE (BC+ ZE) significantly reduced Ni concentrations, reactive oxygen species (ROS) whereas, significant enhancement in the growth, physiological and biochemical attributes along with an improvement in antioxidant defence machinery of red clover plant, compared to rest of the treatments, were observed. Furthermore, BC+ ZE treatment significantly reduced bioconcentration factor (BCF) and bioaccumulation factor (BAF) of Ni in red clover, compared to rest of the treatments. The Ni concentrations in red clover leaves individually reflected a good correlation with Ni concentrations in the extracts (SWE at R2=0.79, DTPA extract at R2=0.84 and Ca(NO3)2 extracts at R2=0.86). Our results indicate that combined application of ZE and BC can significantly reduce the Ni bioavailability in the soil while in parallel improve the antioxidant defence mechanism in plants. Copyright © 2017 Elsevier Inc. All rights reserved.

  16. Population dynamics of banded thrips (Aeolothrips intermedius Bagnall, Thysanoptera, Aeolothripidae) and its potential prey Thysanoptera species on white clover. (United States)

    Trdan, S; Rifelj, M; Valic, N


    In 2002, the occurrence of banded thrips (Aeolothrips intermedius Bagnall) and some other Thysanoptera species on white clover (Trifolium repens L.) was monitored at two locations in the continental part of Slovenia. White clover presents in many countries important intercrop in integrated vegetable production. Light blue sticky boards were placed on grasslands (one parcel on each location) with high percentage of white clover. Sticky boards were changed in about 10-days intervals from the end of April till the beginning of October. Number of caught individuals on the boards was counted. They were classified in three different groups: 1. Aeolothrips intermedius, 2. representatives of Haplothrips, Odontothrips and Frankliniella genera, 3. representatives of Thrips genus. We stated that, compared with the other Thysanoptera species in the open, predatory thrips occurs in lower number. Predatory species Aeolothrips intermedius was the most numerous during the flowering of white clover. It was established that other Thysanoptera species (the most of them are facultative phytophagous species) were more numerous also in the periods of less favourable weather conditions and during the non-flowering growing stages of white clover. Based on the results of present research we concluded that A. intermedius has a potential to control onion thrips (Thrips tabaci Lindeman), especially in July and August, when in the open both species occur in high numbers.

  17. Rapid plant identification using species- and group-specific primers targeting chloroplast DNA.

    Directory of Open Access Journals (Sweden)

    Corinna Wallinger

    Full Text Available Plant identification is challenging when no morphologically assignable parts are available. There is a lack of broadly applicable methods for identifying plants in this situation, for example when roots grow in mixture and for decayed or semi-digested plant material. These difficulties have also impeded the progress made in ecological disciplines such as soil- and trophic ecology. Here, a PCR-based approach is presented which allows identifying a variety of plant taxa commonly occurring in Central European agricultural land. Based on the trnT-F cpDNA region, PCR assays were developed to identify two plant families (Poaceae and Apiaceae, the genera Trifolium and Plantago, and nine plant species: Achillea millefolium, Fagopyrum esculentum, Lolium perenne, Lupinus angustifolius, Phaseolus coccineus, Sinapis alba, Taraxacum officinale, Triticum aestivum, and Zea mays. These assays allowed identification of plants based on size-specific amplicons ranging from 116 bp to 381 bp. Their specificity and sensitivity was consistently high, enabling the detection of small amounts of plant DNA, for example, in decaying plant material and in the intestine or faeces of herbivores. To increase the efficacy of identifying plant species from large number of samples, specific primers were combined in multiplex PCRs, allowing screening for multiple species within a single reaction. The molecular assays outlined here will be applicable manifold, such as for root- and leaf litter identification, botanical trace evidence, and the analysis of herbivory.

  18. The estimated nutritive value of three common grassland species at three primary growth harvest dates following ensiling and fractionation of press-cake

    Directory of Open Access Journals (Sweden)

    Joseph McEniry


    Full Text Available   In a Green Biorefinery processing green biomass one possible application for the press-cake fraction is as a feedstuff for ruminants. This study investigates the effects of ensiling and fractionation on the estimated nutritive value of three grassland species harvested at different stages of maturity. Perennial ryegrass (Lolium perenne L., var. Gandalf, cocksfoot (Dactylis glomerata L., var. Pizza and red clover (Trifolium pratense L., var. Merviot were grown in field plots and harvested and ensiled in laboratory silos. These silages were subsequently fractionated into press-cake and press-juice fractions. Loss of soluble, fermentable organic matter during ensiling increased the relative proportions of fibre and crude protein. Fractionation resulted in the substantial reduction of herbage soluble nutrient and mineral content, increasing the fibre content and reducing digestibility and crude protein. The low energy and protein content of the press-cake fraction, especially at later harvest dates, will limit its use in ruminant diets.

  19. Invasive species (United States)

    US Fish and Wildlife Service, Department of the Interior — This is a summary of management activities and research related to invasive species on Neal Smith National Wildlife Refuge between 1992 and 2009. As part of the...

  20. Neuroprotective Potential of Lantana Trifolium Ethanolic Extract ...

    African Journals Online (AJOL)



    Garg et al., ... lose vision completely each year due to the use of EMB (Bourne et al., 2013) [8]. This number ..... Pollinator Specificity in Lantana camara and L. trifolia (Verbenaceae). Biotropica, 8(4), 260–264. 16. Ocheng, F.

  1. Neuroprotective potential of Lantana trifolium ethanolic extract ...

    African Journals Online (AJOL)

    Ethambutol is an anti-tuberculosis drug important in treatment of multidrug resistant tuberculosis which is on a rise due to emergence of Human Immunodeficiency Virus. However, it has been associated with side effects on optic nerve histology leading to severe neuropathy. The purpose of this study was to establish the ...

  2. Invasive species in ass. Trifolio-Agrostietum stoloniferae Marković 1973 in Bačka (Serbia

    Directory of Open Access Journals (Sweden)

    Džigurski Dejana M.


    Full Text Available In the vegetation of meadows and pastures, due to climate changes and an inadequate and intensive use of hydromeliorative measures, invasive species play a significant role in the degradation of biodiversity. Secondary development of ass. Trifolio-Agrostietum stoloniferae Marković 1973 stands was observed in Bačka, in periodically flooded pastures. Floristic composition of these stands consists of 117 plant species, of which 94 grow in the Danube riverbank region and 97 around the Tisa river. According to the floristic analysis, Ambrosia artemisiifolia, Bellis perennis, Carduus nutans, Cirsium arvense, Eupatorium cannabinum, Linaria vulgaris, Lotus corniculatus, Lythrum salicaria, Rumex crispus, and Trifolium repens are characterized as invasive plants of the European region. Moreover, Ambrosia artemisiifolia, Eleusine indica and Xanthium spinosum, included in the List of invasive species in AP Vojvodina, are also present. Lythrum salicaria is regarded as one of the 100 most dangerous invasive alien species in the world. [Projekat Ministarstva nauke Republike Srbije, br. TR-31016: Improvement of Forage Crops Production on Fields and Grasslands

  3. Species Diversity and Botanical Composition of Permanent Grassland as a Response to Different Grazing Management Practices

    Directory of Open Access Journals (Sweden)

    Marie Štýbnarová


    Full Text Available The effects of different levels of grazing utilization (two, three and four grazing cycles per year and mineral fertilization (nil-fertilization; N100P30K60 on the botanical composition of permanent grasslands were studied in the locality of Rapotín (Czech Republic, 332 m a.s.l. from 2003–2010. The vegetation of the experimental pasture was classified as Cynosurion. It was found that moderate treatment (three grazing cycles per year without mineral fertilization showed the highest value of diversity index (DI = 6.08, and maximum dominance of legumes (Dmax = 9.1%, particularly Trifolium repens. The highest dominance of grasses (Dmax = 77.7%, mainly Dactylis glomerata and Elytrigia repens, was achieved with the fertilized treatment utilized in two grazing cycles per year. Based on RDA results, tested management treatments explained 26% of species composition variability, where effect of number of grazing cycles per year was five-times higher than effect of fertilization. We recommend grassland utilization in three grazing cycles per year as the most suitable way from the objective of both species diversity and botanical composition of pastures in similar site conditions. Pasture fertilization should be more controlled by careful consideration of individual pasture goals, actual nutrient status of the soil and possible environmental risks.


    African Journals Online (AJOL)


    e. Biochemical screening and serological tests for Salmonellae. Identification of Salmonella species was done biochemically. Triple sugar Iron (TSI) agar motility, urease and citrate utilization tests were also used to screen the isolates before serologic testing was performed. (Cheesbrough, 2002; Perilla, 2003). Triple sugar ...

  5. Phytoplankton specie..

    African Journals Online (AJOL)

    each Station, samples for diversity data were collected by plankton net, which was towed at the surface water, while those for Spatial distribution and abundance were collected using a l l Van. Dorn water Sampler. A total of 13 Species belonging to 52 different genera were identified. Cyanobacteria were the most diverse ...

  6. Wild plant species growing closely connected in a subalpine meadow host distinct root-associated bacterial communities

    Directory of Open Access Journals (Sweden)

    Kristin Aleklett


    Full Text Available Plant roots are known to harbor large and diverse communities of bacteria. It has been suggested that plant identity can structure these root-associated communities, but few studies have specifically assessed how the composition of root microbiota varies within and between plant species growing under natural conditions. We assessed the community composition of endophytic and epiphytic bacteria through high throughput sequencing using 16S rDNA derived from root tissues collected from a population of a wild, clonal plant (Orange hawkweed–Pilosella aurantiaca as well as two neighboring plant species (Oxeye daisy–Leucanthemum vulgare and Alsike clover–Trifolium hybridum. Our first goal was to determine if plant species growing in close proximity, under similar environmental conditions, still hosted unique root microbiota. Our results showed that plants of different species host distinct bacterial communities in their roots. In terms of community composition, Betaproteobacteria (especially the family Oxalobacteraceae were found to dominate in the root microbiota of L. vulgare and T. hybridum samples, whereas the root microbiota of P. aurantiaca had a more heterogeneous distribution of bacterial abundances where Gammaproteobacteria and Acidobacteria occupied a larger portion of the community. We also explored the extent of individual variance within each plant species investigated, and found that in the plant species thought to have the least genetic variance among individuals (P. aurantiaca still hosted just as diverse microbial communities. Whether all plant species host their own distinct root microbiota and plants more closely related to each other share more similar bacterial communities still remains to be fully explored, but among the plants examined in this experiment there was no trend that the two species belonging to the same family shared more similarities in terms of bacterial community composition.

  7. Emergence and seedling growth of five forage legume species at ...

    African Journals Online (AJOL)

    A field study compared the seedling emergence and structure of five forage legumes (Trifolium repens L., Medicago falcata L., Melilotus suaveolens Ledeb, Medicago sativa L. and Lespedeza davurica Schindler) at five planting depths (1, 2, 4, 6 and 8 cm) and two light levels (full light and shade) on the 21st day after ...

  8. Effect of grass species on NDF ruminal degradability and ...

    African Journals Online (AJOL)


    ryegrass (Lolium perenne L.; 10%), white clover (Trifolium repens L.; 10%) and herbs (5%). For the in situ determination, the silage samples were oven-dried at 50 °C for 48 h and milled to pass a 1 mm screen. The rumen degradability of the NDF, in the experimental silages, was determined by incubating 1.5 g of each.

  9. Comparison of species-rich cover crop mixtures in Hungarian vineyards (United States)

    Donkó, Adam; Miglécz, Tamas; Valkó, Orsolya; Török, Peter; Deák, Balazs; Kelemen, Andras; Zanathy, Gabor; Drexler, Dora


    , Plantago lanceolata, Trifolium pratense, Trifolium repens and Vicia sativa. We found that weed cover was lower in every treatment compared to the unsown control plots, thus, cover crops suppressed weeds of the inter-rows effectively. Most examined indices of grapevines were not significantly affected by the applied cover crop. However, the tendency of the results shows that in the drier climate of Hungary every second inter-row sowing is more preferable than consecutive cover-crop application, where erosion control is not essential. The opinion of the growers about the mixtures varied. The Biocont-Ecovin mixture was praised for its early aesthetic qualities, produced by Camelina sativa, Phacelia tanacetifolia and Sinapis alba. However, it was criticized for its non-native species, the foreign provenance of some seeds, and the height of the vegetation. The other two mixtures did not produce a spectacular flowering, but developed a lower canopy, and were praised for their native species content. Due to spring sowing the grass-herb mixture, containing a number of species with autumn germination, produced the lowest coverage among the tested mixtures in the first year. However, as predicted, it performed satisfactorily in the second year of the trial. The interest of the vine-growers underlines the importance of the topic for the Central-Eastern European region, thus further examination will be continued in 2014.

  10. Weeds in Organic Fertility-Building Leys: Aspects of Species Richness and Weed Management

    Directory of Open Access Journals (Sweden)

    Thomas F. Döring


    Full Text Available Legume-based leys (perennial sod crops are an important component of fertility management in organic rotations in many parts of Europe. Despite their importance, however, relatively little is known about how these leys affect weed communities or how the specific composition of leys may contribute to weed management. To determine whether the choice of plant species in the ley affects weeds, we conducted replicated field trials at six locations in the UK over 24 months, measuring weed cover and biomass in plots sown with monocultures of 12 legume and 4 grass species, and in plots sown with a mixture of 10 legume species and 4 grass species. Additionally, we monitored weed communities in leys on 21 organic farms across the UK either sown with a mixture of the project species or the farmers’ own species mix. In total, 63 weed species were found on the farms, with the annuals Stellaria media, Sonchus arvensis, and Veronica persica being the most frequent species in the first year after establishment of the ley, while Stellaria media and the two perennials Ranunculus repens and Taraxacum officinale dominated the weed spectrum in the second year. Our study shows that organic leys constitute an important element of farm biodiversity. In both replicated and on-farm trials, weed cover and species richness were significantly lower in the second year than in the first, owing to lower presence of annual weeds in year two. In monocultures, meadow pea (Lathyrus pratensis was a poor competitor against weeds, and a significant increase in the proportion of weed biomass was observed over time, due to poor recovery of meadow pea after mowing. For red clover (Trifolium pratense, we observed the lowest proportion of weed biomass in total biomass among the tested legume species. Crop biomass and weed biomass were negatively correlated across species. Residuals from the linear regression between crop biomass and weed biomass indicated that at similar levels of crop

  11. Plant population differentiation and climate change: responses of grassland species along an elevational gradient. (United States)

    Frei, Esther R; Ghazoul, Jaboury; Matter, Philippe; Heggli, Martin; Pluess, Andrea R


    Mountain ecosystems are particularly susceptible to climate change. Characterizing intraspecific variation of alpine plants along elevational gradients is crucial for estimating their vulnerability to predicted changes. Environmental conditions vary with elevation, which might influence plastic responses and affect selection pressures that lead to local adaptation. Thus, local adaptation and phenotypic plasticity among low and high elevation plant populations in response to climate, soil and other factors associated with elevational gradients might underlie different responses of these populations to climate warming. Using a transplant experiment along an elevational gradient, we investigated reproductive phenology, growth and reproduction of the nutrient-poor grassland species Ranunculus bulbosus, Trifolium montanum and Briza media. Seeds were collected from low and high elevation source populations across the Swiss Alps and grown in nine common gardens at three different elevations with two different soil depths. Despite genetic differentiation in some traits, the results revealed no indication of local adaptation to the elevation of population origin. Reproductive phenology was advanced at lower elevation in low and high elevation populations of all three species. Growth and reproduction of T. montanum and B. media were hardly affected by garden elevation and soil depth. In R. bulbosus, however, growth decreased and reproductive investment increased at higher elevation. Furthermore, soil depth influenced growth and reproduction of low elevation R. bulbosus populations. We found no evidence for local adaptation to elevation of origin and hardly any differences in the responses of low and high elevation populations. However, the consistent advanced reproductive phenology observed in all three species shows that they have the potential to plastically respond to environmental variation. We conclude that populations might not be forced to migrate to higher elevations

  12. Heterogeneous responses to ozone and nitrogen alter the species composition of Mediterranean annual pastures. (United States)

    Calvete-Sogo, H; González-Fernández, I; Sanz, J; Elvira, S; Alonso, R; García-Gómez, H; Ibáñez-Ruiz, M A; Bermejo-Bermejo, V


    Air pollution represents a threat to biodiversity throughout the world and particularly in the Mediterranean area, where high tropospheric ozone (O3) concentrations and atmospheric nitrogen (N) deposition are frequently recorded. Mediterranean annual pastures are among the most important ecosystems in southern Europe due to their high biodiversity and extension. Aiming to study the responses of these communities to the main atmospheric pollutants in the Mediterranean region, an experimental study was performed in an open-top chamber (OTC) facility. A mixture of six species representative of annual pastures was grown under field conditions inside the OTC. Plants were exposed for 39 days to four O3 treatments and three doses of N. The species responded heterogeneously to both factors. Legumes did not react to N but were very sensitive to O3: Trifolium species responded negatively, while Ornithopus responded positively, taking advantage of the greater sensitivity of clovers to O3. The grasses and the herb were more tolerant of O3 and grasses were the most responsive to N. Significant interactions between factors indicated a loss of effectiveness of N in O3-polluted atmospheres and an ability of O3 to counterbalance the damage induced by N input, but both effects were dependent on O3 and N levels. The inclusion of plant competition in the experimental design was necessary to reveal results that would otherwise be missed, such as the positive growth responses under elevated O3 levels. Surprisingly, competition within the legume family played the most important role in the overall response of the annual community to O3. Both tropospheric O3 and N deposition should be considered important drivers of the structure and biodiversity of Mediterranean annual pastures.

  13. Decrease in the Photosynthetic Performance of Temperate Grassland Species Does Not Lead to a Decline in the Gross Primary Production of the Ecosystem

    Directory of Open Access Journals (Sweden)

    Anthony Digrado


    Full Text Available Plants, under stressful conditions, can proceed to photosynthetic adjustments in order to acclimatize and alleviate the detrimental impacts on the photosynthetic apparatus. However, it is currently unclear how adjustment of photosynthetic processes under environmental constraints by plants influences CO2 gas exchange at the ecosystem-scale. Over a 2-year period, photosynthetic performance of a temperate grassland ecosystem was characterized by conducting frequent chlorophyll fluorescence (ChlF measurements on three primary grassland species (Lolium perenne L., Taraxacum sp., and Trifolium repens L.. Ecosystem photosynthetic performance was estimated from measurements performed on the three dominant grassland species weighed based on their relative abundance. In addition, monitoring CO2 fluxes was performed by eddy covariance. The highest decrease in photosynthetic performance was detected in summer, when environmental constraints were combined. Dicot species (Taraxacum sp. and T. repens presented the strongest capacity to up-regulate PSI and exhibited the highest electron transport efficiency under stressful environmental conditions compared with L. perenne. The decline in ecosystem photosynthetic performance did not lead to a reduction in gross primary productivity, likely because increased light energy was available under these conditions. The carbon amounts fixed at light saturation were not influenced by alterations in photosynthetic processes, suggesting photosynthesis was not impaired. Decreased photosynthetic performance was associated with high respiration flux, but both were influenced by temperature. Our study revealed variation in photosynthetic performance of a grassland ecosystem responded to environmental constraints, but alterations in photosynthetic processes appeared to exhibit a negligible influence on ecosystem CO2 fluxes.

  14. Effect of smoke, charred wood, and nitrogenous compounds on seed germination of ten species from woodland in central-western Spain. (United States)

    Pérez-Fernández, M A; Rodríguez-Echeverría, S


    The effect of smoke, charred wood, and nitrogenous compounds on germination was tested on 10 species of the Cistaceae, Poaceae, Fabaceae, and Asteraceae, from fire-prone, shrubby woodlands in central-western Spain. Dry seeds were exposed to smoke, by watering with distilled water-charred wood suspensions, or NaNO2, KNO3, NH4Cl, and NH4NO3. Smoke enhanced germination in 9 of 10 of the species. In species of Poaceae, germination was stimulated by 20 min of smoke exposure. In Asteraceae and Fabaceae species, 10 min of smoke exposure was the most effective treatment for enhancing germination. Three species--Cistus ladanifer, Cistus crispus, and Cistus monspeliensis--had a positive response to 20 min of smoke exposure; germination of Cistus salviifolius L. was also enhanced after 10 min. The effect of charred wood was variable, with no consistent germination pattern within the families. Trifolium angustifolium and Retama sphaerocarpa showed no stimulation of germination under most of the charred wood concentrations. Similarly, germination of Senecio jacobea under the charred wood treatment did not surpass that of the control. NaNO2 promoted seed germination in Dactylis glomerata (10 mM), Cistus ladanifer (1, 10, and 25 mM), and Cistus crispus (1 and 10 mM). KNO3 enhanced germination in Dactylis glomerata (1 and 25 mM), Dittrichia viscosa (10 and 25 mM), C. ladanifer (1, 10, and 25 mM), Cistus crispus (1 and 25 mM), and C. salviifolius aud C. monspeliensis (25 mM). NH4Cl induced germination of Dactylis glomerata and Dittrichia viscosa (1 mM), and Cistus species germinated best in 25 mM of this salt. NH4NO3 induced germination only in Cistus species. Holcus lanatus had the highest level of germination regardless of treatment.

  15. Using alternative forage species to reduce emissions of the greenhouse gas nitrous oxide from cattle urine deposited onto soil. (United States)

    Luo, J; Balvert, S F; Wise, B; Welten, B; Ledgard, S F; de Klein, C A M; Lindsey, S; Judge, A


    Grazed pastures are a major contributor to emissions of the greenhouse gas nitrous oxide (N2O), and urine deposition from grazing animals is the main source of the emissions. Incorporating alternative forages into grazing systems could be an approach for reducing N2O emissions through mechanisms such as release of biological nitrification inhibitors from roots and increased root depth. Field plot and lysimeter (intact soil column) trials were conducted in a free draining Horotiu silt loam soil to test whether two alternative forage species, plantain (Plantago lanceolate L.) and lucerne (Medicago sativa L.), could reduce N2O emissions relative to traditional pasture species, white clover (Trifolium repens L.) and perennial ryegrass (Lolium perenne L.). The amounts of N2O emitted from the soil below each forage species, which all received the same cow urine at the same rates, was measured using an established static chamber method. Total N2O emissions from the plantain, lucerne and perennial ryegrass controls (without urine application) were generally very low, but emissions from the white clover control were significantly higher. When urine was applied in autumn or winter N2O emissions from plantain were lower compared with those from perennial ryegrass or white clover, but this difference was not found when urine was applied in summer. Lucerne had lower emissions in winter but not in other seasons. Incorporation of plantain into grazed pasture could be an approach to reduce N2O emissions. However, further work is required to understand the mechanisms for the reduced emissions and the effects of environmental conditions in different seasons. Copyright © 2017 Elsevier B.V. All rights reserved.

  16. Agroforestry Species Switchboard

    DEFF Research Database (Denmark)

    Kindt, R.; John, I.; Ordonez, J.


    The current version of the Agroforestry Species Switchboard documents the presence of a total of 26,135 plant species (33,813 species including synonyms) across 19 web-based databases. When available, hyperlinks to information on the selected species in particular databases are provided. In total...

  17. Pasture intake and milk production of dairy cows rotationally grazing on multi-species swards. (United States)

    Roca-Fernández, A I; Peyraud, J L; Delaby, L; Delagarde, R


    Increasing plant species diversity has been proposed as a means for enhancing annual pasture productivity and decreasing seasonal variability of pasture production facing more frequent drought scenarios due to climate change. Few studies have examined how botanical complexity of sown swards affects cow performance. A 2-year experiment was conducted to determine how sward botanical complexity, from a monoculture of ryegrass to multi-species swards (MSS) (grasses-legumes-forb), affect pasture chemical composition and nutritive value, pasture dry matter (DM) intake, milk production and milk solids production of grazing dairy cows. Five sward species: perennial ryegrass (L as Lolium), white clover and red clover (both referred to as T as Trifolium because they were always sown together), chicory (C as Cichorium) and tall fescue (F as Festuca) were assigned to four grazing treatments by combining one (L), three (LT), four (LTC) or five (LTCF) species. Hereafter, the LT swards are called mixed swards as a single combination of ryegrass and clovers, whereas LTC and LTCF swards are called MSS as a combination of at least four species from three botanical families. The experimental area (8.7 ha) was divided into four block replicates with a mineral nitrogen fertilisation of 75 kg N/ha per year for each treatment. In total, 13 grazing rotations were carried out by applying the same grazing calendar and the same pasture allowance of 19 kg DM/cow per day above 4 cm for all treatments. Clover represented 20% of DM for mixed and MSS swards; chicory represented 30% of DM for MSS and tall fescue represented 10% of DM for LTCF swards. Higher milk production (+1.1 kg/day) and milk solids production (+0.08 kg/day) were observed for mixed swards than for ryegrass swards. Pasture nutritive value and pasture DM intake were unaffected by the inclusion of clover. Pasture DM, organic matter and NDF concentrations were lower for MSS than for mixed swards. Higher milk production (+0.8 kg

  18. Variations in Host Preference among and within Populations of Heterodera trifolii and Related Species. (United States)

    Wang, S; Riggs, R D


    Seven populations of Heterodera trifolii from Arkansas, Kentucky, Pennsylvania, and Australia plus 3 or 4 single-cyst isolates (SCI) from each population were tested for reproduction on seven species of plants to compare the host preferences among and within populations. Common lespedeza, Kummerowia striata cv. Kobe, was a good host for all populations and isolates. Therefore, a plant was considered to be a host if the number of females produced on it was 10% or more of the number on Kobe. All seven populations reproduced on Trifolium repens and T. pratense. None reproduced on Beta vulgaris or Glycine max. One single-cyst isolate from the Australian population produced a few females on T. pratense. The Australian population maintained on carnation, Dianthus caryophyllus, produced females on carnation but not on curly dock, Rumex crispus. However, its subpopulation maintained on T. repens produced females on R. crispus but not on carnation. Four of the other six populations produced females on R. crispus, and four produced females on carnation. Differences in host range were observed among seven of the mother populations and their SCI, and among isolates within each population. Five host range patterns were found in populations and SCI of H. trifolii. Significant quantitative differences occurred among populations in the numbers of females on most hosts, between isolates and their original populations, and among isolates from the same population. SCI selected from white clover produced fewer females on a series of test hosts and had host ranges the same as or narrower than those of the original populations. However, SCI selected from Kobe lespedeza had more females on some hosts and had host ranges the same as or wider than those of the original populations. The host ranges of all populations and SCI of H. trifolii were different from those of populations and SCI of race 3 of H. glycines and H. lespedezae.

  19. Produção de forrageiras de inverno em diferentes espaçamentos entre drenos superficiais sob pisoteio animal em várzea Lowland winter species production under different distances between superficial drainage channels and animal load

    Directory of Open Access Journals (Sweden)

    Enio Marchezan


    Full Text Available O objetivo do trabalho foi avaliar o desenvolvimento de espécies forrageiras de inverno em diferentes espaçamentos entre drenos superficiais e efeito do pisoteio animal em propriedades físicas de solo de várzea, num Planossolo, em Santa Maria, RS, Brasil, 1996. Foi utilizado delineamento de blocos ao acaso, dispostos em parcelas subdivididas, com parcelas principais para os espaçamentos entre drenos (4, 8, 12 e 16m e subparcelas para as espécies de inverno, conforme segue: aveia (Avena strigosa, azevém (Lolium multiflorum, L. multiflorum + trevo branco (Trifolium repens, L. multiflorum + trevo vesiculoso (T. vesiculosum, L. multiflorum + comichão (Lotus corniculatus, L. multiflorum + serradela (Ornitophus micranthus. O comportamento das espécies de inverno nos diferentes espaçamentos entre drenos foi avaliado através de coletas de massa seca, realizadas de metro em metro do dreno até o centro da parcela. O pastejo teve início aos 75 dias após a emergência (DAE com carga animal adequada ao resíduo e peso vivo de 150 a 200kg/animal. Verificou-se que não houve diferença no desenvolvimento das espécies forrageiras quanto aos espaçamentos entre drenos superficiais. As propriedades físicas do solo foram influenciadas pelo pisoteio animal, ocorrendo aumento da densidade superficial do solo e diminuição da microporosidade, macroporosidade e porosidade total.The research evaluated the development of winter species under dijferent distances between superficial drainage channeis as well as the ejfect of animal stepping on the physical properties of an Albaqualf soil located in Santa Maria, Brazil 1996. The experimental design was a split piot, where the main plots were distances between drainage channeis, 4, 8, 12 and 16 meters and subplots were the winter species: Avena strigosa, Lolium multiflorum, L. multiflorum + Trifolium repens, L. multiflorum + T. vesiculosum, L. multiflorum + Lotus corniculatus, L. multiflorum + Ornitophus

  20. Endangered Species Act (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The purpose of the Endangered Species Act (ESA) is to protect and recover imperiled species and the ecosystems upon which they depend. The U.S. Fish and Wildlife...

  1. Endangered Species Protection Bulletins (United States)

    Endangered Species Protection Bulletins set forth geographically specific pesticide use limitations for the protection of threatened and endangered (listed) species and their designated critical habitat. Find out how to get and use Bulletins.

  2. Benefits of gene flow are mediated by individual variability in self-compatibility in small isolated populations of an endemic plant species. (United States)

    Frye, Christopher T; Neel, Maile C


    Many rare and endemic species experience increased rates of self-fertilization and mating among close relatives as a consequence of existing in small populations within isolated habitat patches. Variability in self-compatibility among individuals within populations may reflect adaptation to local demography and genetic architecture, inbreeding, or drift. We use experimental hand-pollinations under natural field conditions to assess the effects of gene flow in 21 populations of the central Appalachian endemic Trifolium virginicum that varied in population size and degree of isolation. We quantified the effects of distance from pollen source on pollination success and fruit set. Rates of self-compatibility varied dramatically among maternal plants, ranging from 0% to 100%. This variation was unrelated to population size or degree of isolation. Nearly continuous variation in the success of selfing and near-cross-matings via hand pollination suggests that T. virginicum expresses pseudo-self-fertility, whereby plants carrying the same S-allele mate successfully by altering the self-incompatibility reaction. However, outcrossing among populations produced significantly higher fruit set than within populations, an indication of drift load. These results are consistent with strong selection acting to break down self-incompatibility in these small populations and/or early-acting inbreeding depression expressed upon selfing.

  3. Invasive forest species (United States)

    Barbara L. Illman


    Nonnative organisms that cause a major change to native ecosystems-once called foreign species, biological invasions, alien invasives, exotics, or biohazards–are now generally referred to as invasive species or invasives. invasive species of insects, fungi, plants, fish, and other organisms present a rising threat to natural forest ecosystems worldwide. Invasive...

  4. Species Composition (SC) (United States)

    John F. Caratti


    The FIREMON Species Composition (SC) method is used to provide ocular estimates of cover and height measurements for plant species on a macroplot. The SC method provides plant species composition and coverage estimates to describe a stand or plant community and can be used to document changes over time. It is suited for a wide variety of vegetation types and is...

  5. The Earth's Vanishing Species. (United States)

    USA Today, 1981


    Elaborates on the problem of expanding human activity to the world's plant and animal species. Concludes that preserving an individual species is largely a waste of time and effort and that the best way to protect the most species of plants and animals is to save their environments over large tracts of land. (DB)

  6. Species choice, provenance and species trials among native Brazilian species

    Energy Technology Data Exchange (ETDEWEB)

    Drumond, M.A.


    Six papers from the conference are presented. Drumond, M.A., Potential of species native to the semi-arid tropics, 766-781, (Refs. 18), reports on Anadenanthera macrocarpa, Mimosa species, Schinopsis brasiliensis, Spondias tuberosa, Ziziphus joazeiro, Cnidoscolus phyllacanthus, Bursera leptophleos (leptophloeos), Tabebuia impetiginosa, Astronium urundeuva, and Mimosa caesalpinia. Monteiro, R.F.R., Speltz, R.M., Gurgel, J.T. do A.; Silvicultural performance of 24 provenances of Araucaria angustifolia in Parana, 814-824, (Refs. 8). Pires, C.L. da S., Kalil Filho, A.N., Rosa, P.R.F. da, Parente, P.R., Zanatto, A.C.S.; Provenance trials of Cordia alliodora in the State of Sao Paulo, 988-995, (Refs. 9). Nogueira, J.C.B., Siqueira, A.C.M.F., Garrido, M.A.O., Gurgel Garrido, L.M. do A., Rosa, P.R.F., Moraes, J.L. de, Zandarin, M.A., Gurgel Filho, O.A., Trials of some native species in various regions of the State of Sao Paulo, 1051-1063, (Refs. 9) describes Centrolobium tomentosum, Peltophorum dubium, Tabebuia vellosoi, Cariniana legalis, and Balfourodendron riedelianum. Batista, M.P., Borges, J.F., Franco, M.A.B.; Early growth of a native species in comparison with exotics in northeastern Para, Brazil, 1105-1110, (Refs. 3). Jacaranda copaia is compared with Gmelina arborea, Pinus caribaea various hondurensis, Eucalyptus deglupta, and E. urophylla. Lima, P.C.F., Souza, S.M. de, Drumond, M.A.; Trials of native forest species at Petrolina, Pernambuco, 1139-1148, (Refs. 8), deals with Anadenanthera macrocarpa, Piptadenia obliqua, Pithecellobium foliolosum, Astronium urundeuva, Schinopsis brasiliensis, Cassia excelsa, Caesalpinia pyramidalis, Parkia platycephala, Pseudobombax simplicifolium, Tabebuia impetiginosa, Caesalpinia ferrea, and Aspidosperma pyrifolium. 18 references.

  7. Support your local species

    DEFF Research Database (Denmark)

    Stärk, Johanna

    Nearly a quarter of all animal species within the European Union are threatened with extinction. Protecting many of these species will require the full spectrum of conservation actions from in-situ to ex-situ management. Holding an estimated 44% of EU Red Listed terrestrial vertebrates, zoos hereby...... play an important role in protecting local species. However, outcomes of conservation actions are often highly uncertain and if European zoos want to support the conservation of threatened species, they are faced with the question of which species to target first and which conservation strategy...... to choose. Current decision-making in resource allocation and conservation planning is often, as in many other disciplines, based on little scientific ground. Here, we propose a Decision Analysis framework to support the Ex-situ guidelines of the Species Survival Commission of the IUCN. In which we assessed...

  8. The Origin of Species

    NARCIS (Netherlands)

    Darwin, Charles


    In The Origin of Species Darwin outlined his theory of evolution, which proposed that species had been evolving and differentiating over time under the influence of natural selection. On its publication it became hugely influential, bringing about a seismic shift in the scientific view of humanitys

  9. (WF n ) species

    Indian Academy of Sciences (India)

    Abstract. The present work deals with a systematic study on WFn species using ab initio density functional method. The geometrical features related to the equilibrium structures of WFn species up to n = 5 are high- lighted and the effect of addition as well as removal of an electron is discussed. The chemical stability of.

  10. Arctic species resilience

    DEFF Research Database (Denmark)

    Mortensen, Lars O.; Forchhammer, Mads C.; Jeppesen, Erik

    the predicted increase in climate variability. Whereas species may show relatively high phenological resilience to climate change per se, the resilience of systems may be more constrained by the inherent dependence through consumer-resource interactions across trophic levels. During the last 15 years...... and resources. This poster will present the conceptual framework for this project focusing on species resilience....

  11. Genetic variation of white clover ( Trifolium repens L.) collections ...

    African Journals Online (AJOL)

    White clover is an important legume naturalized in China. But genetic variation of Chinese local white clover germplasm has not been reported. There is no information for parents' selection and genetic resource conservation. The objective of this study was to investigate and characterize genetic variation of ten local white ...

  12. Salt tolerance in red clover ( Trifolium pratense L.) seedlings | Asci ...

    African Journals Online (AJOL)

    African Journal of Biotechnology. Journal Home · ABOUT · Advanced Search · Current Issue · Archives · Journal Home > Vol 10, No 44 (2011) >. Log in or Register to get access to full text downloads.

  13. Forage yield of berseem (Trifolium alaxandrium) as affected by ...

    African Journals Online (AJOL)



    Oct 17, 2011 ... inositol phosphate which may be tri, tetra or hex-inositol. (1,2, 3,4,5,6 myoinositol hexkisposphtae also called. Phytic acid (Brune et al., 1992). The project was therefore designed to find out the effect of different levels of phosphorus and potassium on the forage yield performance of berseem in the irrigated.

  14. Growth and biomass yield response of clover ( Trifolium decorum ...

    African Journals Online (AJOL)

    ... wheat - clover and R2 = potato-clover) were factorially arranged and laid out in a completely randomized block design (RCBD) with four replications. Plant height, number of tillers plant-1, number of nodules plant-1, root biomass plant-1 and above ground biomass of clover was recorded and analyzed using SAS system.

  15. Extraction and purification of formonometin from Trifolium pratense L ...

    African Journals Online (AJOL)

    SEM showed that formononetin was successfully integrated in the structure of lecithin. DSC thermograms of the complex mainly demonstrated that the presence of lecithin caused the disappearing of characteristic endothermal peaks of formononetin, while x-diffractograms indicate that the crystalline peak of formononetin ...

  16. Extraction and purification of formonometin from Trifolium pratense L ...

    African Journals Online (AJOL)

    UV/Vis), Fourier transform infrared spectroscopy (FT-IR), scanning electron microscopy (SEM), differential scanning calorimetry (DSC) and x-ray diffractometry (XRD). Results: UV ... usually extracted from natural plants by organic solvents [9,10 ...

  17. Extragastric Helicobacter species

    DEFF Research Database (Denmark)

    On, Stephen L.W.; Hynes, S.; Wadstrom, T.


    The genus Helicobacter has expanded at a rapid pace and no fewer than 31 species have been named since the proposal of the genus in 1989. Of these 31 species, 22 are principally associated with extragastric niches and there is increasing interest in the role of these taxa in diseases of humans...... and animals. Substantial evidence attests to certain species playing a role in the pathogenesis of enteric, hepatic and biliary disorders and some taxa demonstrate zoonotic potential. The importance of extragastric Helicobacters is likely to be an important topic for research in the near future. Here...

  18. Dynamic origin of species


    Sadovsky, Michael G.


    A simple model of species origin resulted from dynamic features of a population, solely, is developed. The model is based on the evolution optimality in space distribution, and the selection is gone over the mobility. Some biological issues are discussed.

  19. Fire Management Species Profiles (United States)

    US Fish and Wildlife Service, Department of the Interior — The objective of the Fire Management Species Profile project is to identify habitat management objectives that are specific, measurable, achievable, clearly...

  20. Hierarchical species distribution models (United States)

    Hefley, Trevor J.; Hooten, Mevin B.


    Determining the distribution pattern of a species is important to increase scientific knowledge, inform management decisions, and conserve biodiversity. To infer spatial and temporal patterns, species distribution models have been developed for use with many sampling designs and types of data. Recently, it has been shown that count, presence-absence, and presence-only data can be conceptualized as arising from a point process distribution. Therefore, it is important to understand properties of the point process distribution. We examine how the hierarchical species distribution modeling framework has been used to incorporate a wide array of regression and theory-based components while accounting for the data collection process and making use of auxiliary information. The hierarchical modeling framework allows us to demonstrate how several commonly used species distribution models can be derived from the point process distribution, highlight areas of potential overlap between different models, and suggest areas where further research is needed.

  1. Threatened & Endangered Species Occurrences (United States)

    Kansas Data Access and Support Center — The database consists of a single statewide coverage of location records for 54 species contained in the Kansas Natural Heritage Inventory database of the Kansas...

  2. Endangered Species: Pesticide Restrictions (United States)

    Our goal is to protect threatened and endangered species and their habitats, without placing unnecessary burden on agriculture and pesticide users. Pesticide limitations are developed to ensure safe use of pesticides in order to meet this goal.

  3. The species in primatology. (United States)

    Groves, Colin


    Biologists of the late eighteenth and early nineteenth centuries all bandied about the term "species," but very rarely actually said what they meant by it. Often, however, one can get inside their thinking by piecing together some of their remarks. One of the most nearly explicit-appropriately, for the man who wrote a book called The Origin of Species - was Charles Darwin: "Practically, when a naturalist can unite two forms together by others having intermediate characters, he treats the one as a variety of the other… He later translated this into evolutionary terms: "Hereafter, we shall be compelled to acknowledge that the only distinction between species and well-marked varieties is, that the latter are known, or believed, to be connected at the present day by intermediate gradations, whereas species were formerly thus connected"(1:484-5.) Copyright © 2014 Wiley Periodicals, Inc.

  4. Sub specie aeternitatis

    Directory of Open Access Journals (Sweden)

    Laura Gioeni


    Full Text Available Per delineare il rapporto tra etica ed estetica nell'architettura e rispondere alla domanda principale «che cosa è o dovrebbe essere un buon architetto?», il saggio discute la tesi di Wittgenstein secondo cui «l'opera d'arte è l'oggetto visto sub specie aeternitatis e la vita buona è il mondo visto sub specie aeternitatis. Questa è la connessione tra arte ed etica».


    Directory of Open Access Journals (Sweden)

    Alexandru TELEUTA


    Full Text Available The results of the evaluation of the growth and development rates, the seed productivity, the green mass yield, the biochemical composition and the content of amino acids, phosphorous and calcium, the nutritive and energy value of the forage, as well as the biomethane productivity of local ecotypes of the leguminous species maintained in monoculture, in the collection of the Botanical Garden (Institute of the Academy of Sciences of Moldova (BG ASM: Astragalus ponticus, Coronilla varia, Lotus corniculatus, Medicago falcata, Onobrychis arenaria and Trifolium repens are presented in this article. Control variants – the traditional forage crops: Medicago sativa and Onobrychis viciifolia. The local ecotypes of the studied leguminous species were characterized by different growth and development rates. Coronilla varia and Lotus corniculatus, in the 2nd-3rd years, could be harvested, for the first time, 5 days earlier than Medicago sativa, but Medicago falcata and Onobrychis viciifolia – 18 days later. The green mass yield varied from 0.83 kg/m2 to 4.08 kg/m2. The studied ecotypes reached amounts of 0.60-0.89 nutritive units/kg and metabolizable energy 8.05-9.90 MJ/kg of dry matter, the content of digestible protein, of 106.28-225.09 g/nutritive unit, met the zootechnical standards; seed production: 19.12-83.00 g/m2; the biomethane yield ranged from 692 to 3197 m3/ha. Higher yield of natural forage, dry matter and biomethane was produced by Onobrychis arenaria and Coronilla varia.

  6. Effects of species diversity on seasonal variation in herbage yield and nutritive value of seven binary grass-legume mixtures and pure grass under cutting

    DEFF Research Database (Denmark)

    Elgersma, Anjo; Søegaard, Karen


    and diversity on herbage yield, contents of N, neutral detergent fibre (NDF) and in vitro organic matter digestibility (IVOMD). Perennial ryegrass (PR, Lolium perenne) was sown alone and with each of four forage legumes: red clover (RC, Trifolium pratense), lucerne (LU, Medicago sativa), birdsfoot trefoil (BT......, Lotus corniculatus) and white clover (WC, Trifolium repens); WC was also sown with hybrid ryegrass (HR, Lolium × boucheanum), meadow fescue (MF, Festuca pratensis) and timothy (TI, Phleum pratense). Herbage productivity was lowest in pure PR followed by PR/BT, and highest in PR/RC; this mixture had...

  7. Genomic definition of species

    Energy Technology Data Exchange (ETDEWEB)

    Crkvenjakov, R.; Drmanac, R.


    The subject of this paper is the definition of species based on the assumption that genome is the fundamental level for the origin and maintenance of biological diversity. For this view to be logically consistent it is necessary to assume the existence and operation of the new law which we call genome law. For this reason the genome law is included in the explanation of species phenomenon presented here even if its precise formulation and elaboration are left for the future. The intellectual underpinnings of this definition can be traced to Goldschmidt. We wish to explore some philosophical aspects of the definition of species in terms of the genome. The point of proposing the definition on these grounds is that any real advance in evolutionary theory has to be correct in both its philosophy and its science.

  8. Bounding Species Distribution Models (United States)

    Stohlgren, Thomas J.; Jarnevich, Cahterine S.; Morisette, Jeffrey T.; Esaias, Wayne E.


    Species distribution models are increasing in popularity for mapping suitable habitat for species of management concern. Many investigators now recognize that extrapolations of these models with geographic information systems (GIS) might be sensitive to the environmental bounds of the data used in their development, yet there is no recommended best practice for "clamping" model extrapolations. We relied on two commonly used modeling approaches: classification and regression tree (CART) and maximum entropy (Maxent) models, and we tested a simple alteration of the model extrapolations, bounding extrapolations to the maximum and minimum values of primary environmental predictors, to provide a more realistic map of suitable habitat of hybridized Africanized honey bees in the southwestern United States. Findings suggest that multiple models of bounding, and the most conservative bounding of species distribution models, like those presented here, should probably replace the unbounded or loosely bounded techniques currently used [Current Zoology 57 (5): 642-647, 2011].

  9. Aquatic Nuisance Species Locator (United States)

    Data in this map has been collected by the United States Geological Survey's Nonindigenous Aquatic Species program located in Gainesville, Florida ( This dataset may have some inaccuracies and is only current to June 15, 2012. The species identified in this dataset are not inclusive of all aquatic nuisance species, but rather a subset identified to be at risk for transport by recreational activities such as boating and angling. Additionally, the locations where organisims have been identified are also not inclusive and should be treated as a guide. Organisms are limited to the following: American bullfrog, Asian clam, Asian shore crab, Asian tunicate, Australian spotted jellyfish, Chinese mitten crab, New Zealand mudsnail, Colonial sea squirt, Alewife, Bighead carp, Black carp, Flathead catfish, Grass carp, Green crab, Lionfish, Northern snakehead, Quagga mussel, Round Goby, Ruffe, Rusty crayfish, Sea lamprey, Silver carp, Spiny water flea, Veined rapa whelk, Zebra mussel

  10. Highly productive forage legume stands show no positive biodiversity effect on yield and N2-fixation

    DEFF Research Database (Denmark)

    Dhamala, Nawa Raj; Eriksen, Jørgen; Carlsson, Georg


    . Methodology N fixation, dry matter (DM) and nitrogen (N) yields were quantified in a field experiment for red clover (Trifolium pratense L.), white clover (Trifolium repens L.) and lucerne (Medicago sativa L.) pure stands and mixtures using the isotope dilution method. Results All three forage legume species...

  11. Оценка ингибирующей активности штаммов Bacillus subtilis 26 d и Bacillus thuringiensis var . Thuringiensis при прорастании семян Trifolium pratense L .


    Гаджиев, Артем


    Излагаются результаты исследований по оценке ингибирующей активности штаммов Bacillus subtilis 26 D и Bacillus thuringiensis var. thuringiensis. Использованы параметрические и непараметрические методы анализа. Обосновывается вывод, что энтомопатогенный штамм Bacillus thuringiensis var. thuringiensis существенно угнетает рост и развитие прорастающих семян Trifolium pratense L.. Штамм Bacillus subtilis 26 D не фитотоксичен....

  12. Species of Tursiops

    African Journals Online (AJOL)

    Western lad/“an Dose/7.x Mar. 50/1 Vol. 4, No. 1, pp. ..... collected during the survey. The high percentage of T. aduncns caught in gillnets in the coastal waters indicates that they may be the most abundant inshore dolphin species around Zanzibar. ... This area is relatively shallow (maximum depth. <50m) and may not meet ...

  13. Species Distribution Modelling

    DEFF Research Database (Denmark)

    Gomes, Vitor H. F.; Ijff, Stephanie D.; Raes, Niels


    Species distribution models (SDMs) are widely used in ecology and conservation. Presence-only SDMs such as MaxEnt frequently use natural history collections (NHCs) as occurrence data, given their huge numbers and accessibility. NHCs are often spatially biased which may generate inaccuracies in SD...

  14. Species of Tursiops

    African Journals Online (AJOL)

    Abstract—Incidental catches (bycatch) in gillnet fisheries off Zanzibar (Unguja Island), as a source of mortality among several species of dolphins, were reported in a questionnaire survey conducted in 1999. As a follow-up to that survey, from January 2000 to August 2003, we monitored the incidental catches of dolphins ...

  15. Man as a Species. (United States)

    Solem, Alan; And Others

    Written in 1964, the document represents experimental material of the Anthropology Curriculum Study Project. The objectives of the project were to discuss the evolution of man as distinguished from the evolution of other species and as related to culture, and to emphasize human diversity. Three brief essays are presented. The first, "The…

  16. Endangered Species. Teacher's Guide. (United States)

    Brown, Mark; And Others

    This unit is intended to examine the causes of the endangerment of Florida's plant and animal species with a detailed look at varied ecological systems. Individual lessons are designed to be used either by individual students progressing at their own rate or by small groups. Units may be modified for use by large groups. (Author/RE)

  17. Translating Dyslexia across Species (United States)

    Gabel, Lisa A.; Manglani, Monica; Escalona, Nicholas; Cysner, Jessica; Hamilton, Rachel; Pfaffmann, Jeffrey; Johnson, Evelyn


    Direct relationships between induced mutation in the "DCDC2" candidate dyslexia susceptibility gene in mice and changes in behavioral measures of visual spatial learning have been reported. We were interested in determining whether performance on a visual-spatial learning and memory task could be translated across species (study 1) and…

  18. Prices and species diversity

    DEFF Research Database (Denmark)

    Sauer, Johannes

    . Based on a biologically defined species diver-sity index we incorporate biodiversity either as a desirable output or biodiversity loss as a detrimental input. Beside quantitative shadow price measures the main contribu-tion of the work is the evidence that parametric scores of environmental efficiency...... of biodiversity and the appropriate incorporation in stochastic fron-tier models to achieve more realistic measures of production efficiency. We use the empirical example of tobacco production drawing from as well as affecting species diversity in the surrounding forests. We apply a shadow profit distance...... function ap-proach as well as a fixed effects non-radial technique to reveal input specific alloca-tive and output oriented technical efficiency measures as well as measures of envi-ronmental efficiency. We also consider functional consistency by imposing convexity on the translog profit function model...

  19. Prior indigenous technological species (United States)

    Wright, Jason T.


    One of the primary open questions of astrobiology is whether there is extant or extinct life elsewhere the solar system. Implicit in much of this work is that we are looking for microbial or, at best, unintelligent life, even though technological artefacts might be much easier to find. Search for Extraterrestrial Intelligence (SETI) work on searches for alien artefacts in the solar system typically presumes that such artefacts would be of extrasolar origin, even though life is known to have existed in the solar system, on Earth, for eons. But if a prior technological, perhaps spacefaring, species ever arose in the solar system, it might have produced artefacts or other technosignatures that have survived to present day, meaning solar system artefact SETI provides a potential path to resolving astrobiology's question. Here, I discuss the origins and possible locations for technosignatures of such a prior indigenous technological species, which might have arisen on ancient Earth or another body, such as a pre-greenhouse Venus or a wet Mars. In the case of Venus, the arrival of its global greenhouse and potential resurfacing might have erased all evidence of its existence on the Venusian surface. In the case of Earth, erosion and, ultimately, plate tectonics may have erased most such evidence if the species lived Gyr ago. Remaining indigenous technosignatures might be expected to be extremely old, limiting the places they might still be found to beneath the surfaces of Mars and the Moon, or in the outer solar system.

  20. Genomics of Bacillus Species (United States)

    Økstad, Ole Andreas; Kolstø, Anne-Brit

    Members of the genus Bacillus are rod-shaped spore-forming bacteria belonging to the Firmicutes, the low G+C gram-positive bacteria. The Bacillus genus was first described and classified by Ferdinand Cohn in Cohn (1872), and Bacillus subtilis was defined as the type species (Soule, 1932). Several Bacilli may be linked to opportunistic infections. However, pathogenicity among Bacillus spp. is mainly a feature of bacteria belonging to the Bacillus cereus group, including B. cereus, Bacillus anthracis, and Bacillus thuringiensis. Here we review the genomics of B. cereus group bacteria in relation to their roles as etiological agents of two food poisoning syndromes (emetic and diarrhoeal).

  1. Penicillium species causing onychomycosis.

    Directory of Open Access Journals (Sweden)

    Ramani R


    Full Text Available Onychomycosis caused by mould infection is rare. A 40 year old male patient presented with dystrophic finger nails and multiple, erythematous lesions with slightly raised borders and scaling all over the body. The patient was a known diabetic. He did not respond to griseofulvin. Samples from nails and skin scales were cultured. From the nails, Penicillium species and from the skin scales. Trichophyton rubrum were isolated. Ketoconazole therapy (200 mg twice daily x 4 mths led to complete cure with negative cultures and normalization of nails.

  2. Translating dyslexia across species. (United States)

    Gabel, Lisa A; Manglani, Monica; Escalona, Nicholas; Cysner, Jessica; Hamilton, Rachel; Pfaffmann, Jeffrey; Johnson, Evelyn


    Direct relationships between induced mutation in the DCDC2 candidate dyslexia susceptibility gene in mice and changes in behavioral measures of visual spatial learning have been reported. We were interested in determining whether performance on a visual-spatial learning and memory task could be translated across species (study 1) and whether children with reading impairment showed a similar impairment to animal models of the disorder (study 2). Study 1 included 37 participants who completed six trials of four different virtual Hebb-Williams maze configurations. A 2 × 4 × 6 mixed factorial repeated measures ANOVA indicated consistency in performance between humans and mice on these tasks, enabling us to translate across species. Study 2 included a total of 91 participants (age range = 8-13 years). Eighteen participants were identified with reading disorder by performance on the Woodcock-Johnson III Tests of Achievement. Participants completed six trials of five separate virtual Hebb-Williams maze configurations. A 2 × 5 × 6 mixed factorial ANCOVA (gender as covariate) indicated that individuals with reading impairment demonstrated impaired visuo-spatial performance on this task. Overall, results from this study suggest that we are able to translate behavioral deficits observed in genetic animal models of dyslexia to humans with reading impairment. Future studies will utilize the virtual environment to further explore the underlying basis for this impairment.

  3. Save Our Species: Protecting Endangered Species from Pesticides. (United States)

    Environmental Protection Agency, Washington, DC.

    This full-size poster profiles 11 wildlife species that are endangered. Color illustrations of animals and plants are accompanied by narrative describing their habitats and reasons for endangerment. The reverse side of the poster contains information on the Endangered Species Act, why protecting endangered and threatened species is important, how…

  4. Endangered Species Act Critical Habitat (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Critical habitat (CH) is designated for the survival and recovery of species listed as threatened or endangered under the Endangered Species Act (ESA). Critical...

  5. California Endangered Species Resource Guide. (United States)

    California State Dept. of Education, Los Angeles.

    This document was developed in response to California Senate Bill No. 885, "The Endangered Species Education Project," that called for a statewide program in which schools adopt a local endangered species, research past and current efforts to preserve the species' habitat, develop and implement an action plan to educate the community…

  6. 76 FR 1405 - Endangered Species (United States)


    ... National Oceanic and Atmospheric Administration RIN 0648-XA128 Endangered Species AGENCY: National Marine... issued under the authority of the Endangered Species Act of 1973, as amended (ESA; 16 U.S.C. 1531 et seq... species (50 CFR parts 222-226). The five-year permit authorizes up to 130 loggerhead, 70 Kemp's ridley, 60...

  7. 76 FR 2348 - Endangered Species (United States)


    ... National Oceanic and Atmospheric Administration RIN 0648-XA140 Endangered Species AGENCY: National Marine... Fort Fisher. The requested permit has been issued under the authority of the Endangered Species Act of... exporting of endangered and threatened species (50 CFR parts 222-226). The North Carolina Aquarium at Fort...

  8. 76 FR 74778 - Endangered Species (United States)


    ... National Oceanic and Atmospheric Administration RIN 0648-XA850 Endangered Species AGENCY: National Marine... has been issued under the authority of the Endangered Species Act of 1973, as amended (ESA; 16 U.S.C... threatened species (50 CFR parts 222-226). The Permit Holder is issued a five-year permit to study shortnose...

  9. 75 FR 78974 - Endangered Species (United States)


    ... National Oceanic and Atmospheric Administration RIN 0648-XA086 Endangered Species AGENCY: National Marine... Comment'' from the Features box on the Applications and Permits for Protected Species (APPS) home page.... 10022-01 is requested under the authority of the Endangered Species Act of 1973, as amended (16 U.S.C...

  10. Insular species swarm goes underground

    DEFF Research Database (Denmark)

    P. S. Reboleira, Ana Sofia; Enghoff, Henrik


    -group, an insular species swarm distributed in the archipelagos of Madeira and the Canary Islands. We discuss the differences between the new species and their relatives and present information on the subterranean environment of Madeira. An updated overview of the subterranean biodiversity of millipedes......Two new species of the genus Cylindroiulus Verhoeff, 1894, C. julesvernei and C. oromii, are described from the subterranean ecosystem of Madeira Island, Portugal. Species are illustrated with photographs and diagrammatic drawings. The new species belong to the Cylindroiulus madeirae...

  11. Ring species as demonstrations of the continuum of species formation

    DEFF Research Database (Denmark)

    Pereira, Ricardo José Do Nascimento; Wake, David B.


    In the mid-20th century, Ernst Mayr (1942) and Theodosius Dobzhansky (1958) championed the significance of 'circular overlaps' or 'ring species' as the perfect demonstration of the gradual nature of species formation. As an ancestral species expands its range, wrapping around a geographic barrier......, derived taxa within the ring display interactions typical of populations, such as genetic and morphological intergradation, while overlapping taxa at the terminus of the ring behave largely as sympatric, reproductively isolated species. Are ring species extremely rare or are they just difficult to detect......? What conditions favour their formation? Modelling studies have attempted to address these knowledge gaps by estimating the biological parameters that result in stable ring species (Martins et al. 2013), and determining the necessary topographic parameters of the barriers encircled (Monahan et al. 2012...

  12. Native species that can replace exotic species in landscaping

    Directory of Open Access Journals (Sweden)

    Elisabeth Regina Tempel Stumpf


    Full Text Available Beyond aesthetics, the contemporary landscaping intends to provide other benefits for humans and environment, especially related to the environmental quality of urban spaces and conservation of the species. A trend in this direction is the reduction in the use of exotic plants in their designs, since, over time, they can become agents of replacement of native flora, as it has occurred in Rio Grande do Sul with many species introduced by settlers. However, the use of exotic species is unjustifiable, because the flora diversity of the Bioma Pampa offers many native species with appropriate features to the ornamental use. The commercial cultivation and the implantation of native species in landscaped areas constitute innovations for plant nurseries and landscapers and can provide a positive reduction in extractivism, contributing to dissemination, exploitation and preservation of native flora, and also decrease the impact of chemical products on environment. So, this work intends to identify native species of Bioma Pampa with features and uses similar to the most used exotic species at Brazilian landscaping. The species were selected from consulting books about native plants of Bioma Pampa and plants used at Brazilian landscaping, considering the similarity on habit and architecture, as well as characteristics of leafs, flowers and/or fruits and environmental conditions of occurrence and cultivation. There were identified 34 native species able to properly replace exotic species commonly used. The results show that many native species of Bioma Pampa have interesting ornamental features to landscape gardening, allowing them to replace exotic species that are traditionally cultivated.

  13. Species of Wadicosa (Araneae, Lycosidae): a new species from Madagascar. (United States)

    Kronestedt, Torbjörn


    Since establishing the wolf spider genus Wadicosa Zyuzin, 1985 (Zyuzin 1985), eleven species have been accepted in it, either by transfer from Lycosa Latreille, 1804 or Pardosa C.L. Koch, 1847 or by original designation (WSC 2017). However, according to Kronestedt (1987), additional species wait to be formally transferred to Wadicosa. The genus is restricted to the Old World, with one species, Wadicosa jocquei Kronestedt, 2015, recently described from Madagascar and surrounding islands.

  14. New mite species associated with certain plant species from Guam

    Directory of Open Access Journals (Sweden)

    Gadi V.P. Reddy


    Full Text Available Several new mite species have been reported from certain plants from Guam. Most remarkably, the spider mite, Tetranychus marianae (Prostigmata: Tetranychidae and the predatory mite Phytoseius horridus (Mesostigmata: Phytoseiidae (Solanum melongena have been found on eggplant. The noneconomically important species of Brevipalpus californicus(Banks Prostigmata: Tenuipalpidae,Eupodes sp. (Acarina: Eupodidae and predator Cunaxa sp. (Prostigmata: Cunaxidae have been reported on guava (Psidium guajava L.. Also, the non-economically important species Brevipalpus californicus Prostigmata: Tenuipalpidae, Lepidoglyphus destructor (Astigmata: Glycyphagidae and a predator Amblyseius obtusus, species group Amblyseius near lentiginosus (Mesostigmata: Phytoseiidae, have been recorded on cycad (Cycas micronesica.

  15. Earthworm species, a searchable database

    Directory of Open Access Journals (Sweden)

    Csuzdi, Cs.


    Full Text Available The first earthworm species named was Lumbricus terrestris Linnaeus, 1758. Since then, there were some 6000earthworm (Oligochaeta: Megadrili species names described, from which ca. 3000–3500 are valid. In order to help the orientation in such a huge amount of data a web-based database was created. Each record contains the basic data of the species names described; i.e. family, genus, specific epithet, author, year, reference to the original description and optionally the valid combination of the species name and deposition of type specimens. The database is searchable by every field mentioned and the resulted list can be arranged alphabetically.

  16. Quantifying the invasiveness of species

    Directory of Open Access Journals (Sweden)

    Robert Colautti


    Full Text Available The success of invasive species has been explained by two contrasting but non-exclusive views: (i intrinsic factors make some species inherently good invaders; (ii species become invasive as a result of extrinsic ecological and genetic influences such as release from natural enemies, hybridization or other novel ecological and evolutionary interactions. These viewpoints are rarely distinguished but hinge on distinct mechanisms leading to different management scenarios. To improve tests of these hypotheses of invasion success we introduce a simple mathematical framework to quantify the invasiveness of species along two axes: (i interspecific differences in performance among native and introduced species within a region, and (ii intraspecific differences between populations of a species in its native and introduced ranges. Applying these equations to a sample dataset of occurrences of 1,416 plant species across Europe, Argentina, and South Africa, we found that many species are common in their native range but become rare following introduction; only a few introduced species become more common. Biogeographical factors limiting spread (e.g. biotic resistance, time of invasion therefore appear more common than those promoting invasion (e.g. enemy release. Invasiveness, as measured by occurrence data, is better explained by inter-specific variation in invasion potential than biogeographical changes in performance. We discuss how applying these comparisons to more detailed performance data would improve hypothesis testing in invasion biology and potentially lead to more efficient management strategies.

  17. Uncommon Species and Other Features (United States)

    Vermont Center for Geographic Information — The Vermont Fish and Wildlife Department's Natural Heritage Inventory (NHI) maintains a database of uncommon, rare, threatened and endangered species and natural...

  18. Armillaria species in coniferous stands

    Directory of Open Access Journals (Sweden)

    Anna Żółciak


    Full Text Available Identification of the Armillaria species in selected coniferous stands (Scots pine stands, Norway spruce stands and fir stands was the aim of the work carried out on the basis of mating tests and consideration of macroscopic traits of fruit-bodies. One species of Armillaria [A. ostoyae (Romagnesi Herink] was found in Scots pine stands, three species [A. ostoyae, A. cepistipes Velenovský and A. borealis Marxmüller et Korhonen] were found in Norway spruce stands and two species [A. ostoyae and A. cepistipes] were found in fir stands.

  19. Colombian species of Spigelia Colombian species of Spigelia

    Directory of Open Access Journals (Sweden)

    Ewan Joseph


    Full Text Available No recent systematic treatment of the Colombian species of Spigelia (Loganiaceae exists. Two species were described in 1818 from New Granada (Colombia by Humboldt, Bonpland and Kunth. The Panamá Canal Zone species have been enumerated by Standley. R. Knuth has listed the Venezuelan species. Spigelia anthelmia L. has been reported from the Dutch west Indian islands of Curacao, Aruba and Bonaire, adjacent to Venezuela, by Boldingh", Spigelia pedunculata R. & S. has been reported from Ecuador by William Jameson.No recent systematic treatment of the Colombian species of Spigelia (Loganiaceae exists. Two species were described in 1818 from New Granada (Colombia by Humboldt, Bonpland and Kunth. The Panamá Canal Zone species have been enumerated by Standley. R. Knuth has listed the Venezuelan species. Spigelia anthelmia L. has been reported from the Dutch west Indian islands of Curacao, Aruba and Bonaire, adjacent to Venezuela, by Boldingh", Spigelia pedunculata R. & S. has been reported from Ecuador by William Jameson.

  20. Multi-species wild herbivore systems vs. domestic single species ...

    African Journals Online (AJOL)

    Multi-species wild herbivore systems vs. domestic single species systems: a comparison of net animal productivity. PS Goodman. Abstract. Reports the results of a study conducted to compare the short and medium term net annual harvested animal production for six areas situated in the semi-arid bushveld of north eastern ...

  1. Removing other Tree Species does not benefit the Timber Species ...

    African Journals Online (AJOL)

    The endemic canopy tree Cephalosphaera usambarensis is a valuable timber species in montane rainforest of Tanzania. Here we evaluate an experiment in which mature trees of species other than C. usambarensis were removed from an area in the East Usambara Mountains. We compared stage/size structure of the ...

  2. Incorporating Context Dependency of Species Interactions in Species Distribution Models. (United States)

    Lany, Nina K; Zarnetske, Phoebe L; Gouhier, Tarik C; Menge, Bruce A


    Species distribution models typically use correlative approaches that characterize the species-environment relationship using occurrence or abundance data for a single species. However, species distributions are determined by both abiotic conditions and biotic interactions with other species in the community. Therefore, climate change is expected to impact species through direct effects on their physiology and indirect effects propagated through their resources, predators, competitors, or mutualists. Furthermore, the sign and strength of species interactions can change according to abiotic conditions, resulting in context-dependent species interactions that may change across space or with climate change. Here, we incorporated the context dependency of species interactions into a dynamic species distribution model. We developed a multi-species model that uses a time-series of observational survey data to evaluate how abiotic conditions and species interactions affect the dynamics of three rocky intertidal species. The model further distinguishes between the direct effects of abiotic conditions on abundance and the indirect effects propagated through interactions with other species. We apply the model to keystone predation by the sea star Pisaster ochraceus on the mussel Mytilus californianus and the barnacle Balanus glandula in the rocky intertidal zone of the Pacific coast, USA. Our method indicated that biotic interactions between P. ochraceus and B. glandula affected B. glandula dynamics across >1000 km of coastline. Consistent with patterns from keystone predation, the growth rate of B. glandula varied according to the abundance of P. ochraceus in the previous year. The data and the model did not indicate that the strength of keystone predation by P. ochraceus varied with a mean annual upwelling index. Balanus glandula cover increased following years with high phytoplankton abundance measured as mean annual chlorophyll-a. M. californianus exhibited the same

  3. Desempenho de pastagem nativa e pastagem sobre-semeada com forrageiras hibernais com e sem glifosato Performance of native pasture and pasture sodseeded with winter species with or without glyphosate

    Directory of Open Access Journals (Sweden)

    Luciana Melo Rizo


    Full Text Available O experimento foi desenvolvido em Bagé-RS, visando avaliar a produção de matéria seca (MS, taxa de lotação (kg de PV ha-1, ganho de peso vivo por animal (GMD, kg an-1 dia-1 e ganho por hectare (GPV ha-1 em: T1-pastagem nativa (testemunha; T2-pastagem nativa sobre-semeada com azevém (Lolium multiflorum, trevo branco (Trifolium repens e cornichão (Lotus corniculatus; T3- semelhante ao anterior, mais aplicação de glifosato; T4- semelhante ao anterior, porém com adubação dobrada. Foram utilizados novilhos Braford. O sistema de pastejo foi o contínuo com ajustes na lotação para manter um nível de oferta de forragem de 10% (10kg de MS 100kg PV-1 dia-1. Para a determinação da MS da pastagem, utilizou-se o método da dupla amostragem com uso de disco e para a determinação da taxa de acúmulo de MS, utilizou-se o método da gaiola de exclusão. As análises estatísticas foram feitas no programa SAS (1997. O delineamento experimental foi blocos inteiramente casualizados, tendo dois blocos e quatro tratamentos. A introdução de espécies hibernais em pastagem nativa com ou sem uso de glifosato contribuiu para aumentar a produtividade do campo nativo. A sobre-semeadura de espécies hibernais permitiu maior carga e ganho por animal e por área comparados com a pastagem nativa.The experiment was developed in Bagé-RS, Brazil, to evaluate the dry matter production (DM, stocking rate (kg LW ha-1, live weight gain per animal (ADG, kg head-1 day-1 and gain per area (GPA, kg LW ha-1 in: T1-native pasture (control; T2-native pasture sodseeded with Italian ryegrass (Lolium multiflorum, white clover (Trifolium repens and birdsfoot trefoil (Lotus corniculatus; T3-similar to anterior, plus glyphosate spraying; T4-similar to anterior, but with double fertilization. It were utilized Braford steers. The grazing method was the continuous stocking, with stocking adjustments to maintain a level of forage on offer of 10% (10kg of DM 100kg LW-1 day-1. To

  4. Fuzzy species among recombinogenic bacteria

    Directory of Open Access Journals (Sweden)

    Fraser Christophe


    Full Text Available Abstract Background It is a matter of ongoing debate whether a universal species concept is possible for bacteria. Indeed, it is not clear whether closely related isolates of bacteria typically form discrete genotypic clusters that can be assigned as species. The most challenging test of whether species can be clearly delineated is provided by analysis of large populations of closely-related, highly recombinogenic, bacteria that colonise the same body site. We have used concatenated sequences of seven house-keeping loci from 770 strains of 11 named Neisseria species, and phylogenetic trees, to investigate whether genotypic clusters can be resolved among these recombinogenic bacteria and, if so, the extent to which they correspond to named species. Results Alleles at individual loci were widely distributed among the named species but this distorting effect of recombination was largely buffered by using concatenated sequences, which resolved clusters corresponding to the three species most numerous in the sample, N. meningitidis, N. lactamica and N. gonorrhoeae. A few isolates arose from the branch that separated N. meningitidis from N. lactamica leading us to describe these species as 'fuzzy'. Conclusion A multilocus approach using large samples of closely related isolates delineates species even in the highly recombinogenic human Neisseria where individual loci are inadequate for the task. This approach should be applied by taxonomists to large samples of other groups of closely-related bacteria, and especially to those where species delineation has historically been difficult, to determine whether genotypic clusters can be delineated, and to guide the definition of species.

  5. Protein species as diagnostic markers

    NARCIS (Netherlands)

    Steffen, Pascal; Kwiatkowski, Marcel; Robertson, Wesley D.; Zarrine-Afsar, Mash; Deterra, Diana; Richter, Verena; Schlueter, Hartmut


    Many diseases are associated with protein species perturbations. A prominent example of an established diagnostic marker is the glycated protein species of hemoglobin, termed HbA1c. HbA1c concentration is increased in the blood of diabetes mellitus patients due to their poor control of blood glucose

  6. The Colletotrichum gigasporum species complex

    NARCIS (Netherlands)

    Liu, F.; Cai, L.; Crous, P.W.; Damm, U.


    In a preliminary analysis, 21 Colletotrichum strains with large conidia preserved in the CBS culture collection clustered with a recently described species, C. gigasporum, forming a clade distinct from other currently known Colletotrichum species complexes. Multi-locus phylogenetic analyses (ITS,

  7. Antifungal compounds from Piper species (United States)

    Piper is a big genus of the plant family Piperaceae, with more than 700 species widely distributed in the tropical and subtropical regions of the world. Some species are used in folk medicine as analgesics, antiseptics, insecticides, and antimicrobials or for the treatment of toothache, haemorrhoid...

  8. 50 CFR Table 2c to Part 679 - Species Codes: FMP Forage Fish Species (all species of the following families) (United States)


    ... 50 Wildlife and Fisheries 9 2010-10-01 2010-10-01 false Species Codes: FMP Forage Fish Species (all species of the following families) 2c Table 2c to Part 679 Wildlife and Fisheries FISHERY...: FMP Forage Fish Species (all species of the following families) Species Description Code Bristlemouths...

  9. Enolonium Species-Umpoled Enolates

    DEFF Research Database (Denmark)

    Arava, Shlomy; Kumar, Jayprakash N.; Maksymenko, Shimon


    Enolonium species/iodo(III) enolates of carbonyl compounds have been suggested to be intermediates in a wide variety of hypervalent iodine induced chemical transformations of ketones, including α-C-O, α-C-N, α-C-C, and alpha-carbon- halide bond formation, but they have never been characterized. We....... Our results open up chemical space for designing a variety of new transformations. We showcase the ability of enolonium species to react with prenyl, crotyl, cinnamyl, and allyl silanes with absolute regioselectivity in up to 92% yield....... report that these elusive umpoled enolates may be made as discrete species that are stable for several minutes at-78 degrees C, and report the first spectroscopic identification of such species. It is shown that enolonium species are direct intermediates in C-O, C-N, C-Cl, and C-C bond forming reactions...

  10. The ethics of species: an introduction

    National Research Council Canada - National Science Library

    Sandler, Ronald L


    .... In this book, Ronald L. Sandler examines the value of species and the ethical significance of species boundaries and discusses what these mean for species preservation in the light of global climate change, species...

  11. SINET

    African Journals Online (AJOL)

    Mikaniopsis clematoidcs, Galiniera saxifraga. Nuxia congesta are the other common species in this community type. The herbaceous layer includes. Swertia kilimandiscliarii, Thymus schimperii, Carduus chamaecephalus, C, nyassanus Stachys alpina,. Trifolium burclzeliana, T. simense and Cynog'lossum coeruleum.

  12. Meiofaunal cryptic species challenge species delimitation: the case of the Monocelis lineata (Platyhelminthes: Proseriata) species complex

    NARCIS (Netherlands)

    Scarpa, F.; Cossu, P.; Lai, T.; Sanna, D.; Curini-Galletti, M.; Casu, M.


    Given the pending biodiversity crisis, species delimitation is a critically important task in conservation biology, but its efficacy based on single lines of evidence has been questioned as it may not accurately reflect species limits and relationships. Hence, the use of multiple lines of evidence

  13. Molecular Typing of Nocardia Species

    Directory of Open Access Journals (Sweden)

    Seyyed Saeed Eshraghi


    Full Text Available Identification of clinically significant Nocardia species is essential for the definitive diagnosis, predict antimicrobial susceptibility, epidemiological purposes, and for an effective treatment. Conventional identification of Nocardia species in routine medical laboratories which is based on phenotypic (cellular morphology, colonial characteristics, biochemical and enzymatic profiles, and chemotaxonomic characteristics is often laborious, and time-consuming. The procedure requires expertise, and newer species can be difficult to differentiate with accuracy from other related species. Alternative methods of identification, such as high performance liquid chromatography (HPLC and molecular biology techniques allow a better characterization of species. The taxonomy of the genus Nocardia has been dramatically been revised during the last decade and more than 30 valid human clinical significance species of Nocardia have been reported. The use of molecular approaches, including 16S rRNA gene sequencing, restriction fragment length polymorphism (RFLP or PCR restriction endonuclease analysis has been the focus of recent investigations to distinguish the isolates of Nocardia from other actinomycetes genera. The methods have revolutionized the characterization of the Nocardiae by providing rapid, sensitive, and accurate identification procedures. The present review describes the currently known medically important pathogenic species of Nocardia.

  14. Revision of the Palearctic Chaetocnema species (Coleoptera: Chrysomelidae: Galerucinae: Alticini) (United States)

    The Palearctic Chaetocnema species are revised. Seven species are described as new: Chaetocnema belka new species; Chaetocnema bergeali new species; Chaetocnema eastafghanica new species; Chaetocnema franzi new species; Chaetocnema igori new species; Chaetocnema lubischevi new species; Chaetocnema t...

  15. Species-area relationships are controlled by species traits. (United States)

    Franzén, Markus; Schweiger, Oliver; Betzholtz, Per-Eric


    The species-area relationship (SAR) is one of the most thoroughly investigated empirical relationships in ecology. Two theories have been proposed to explain SARs: classical island biogeography theory and niche theory. Classical island biogeography theory considers the processes of persistence, extinction, and colonization, whereas niche theory focuses on species requirements, such as habitat and resource use. Recent studies have called for the unification of these two theories to better explain the underlying mechanisms that generates SARs. In this context, species traits that can be related to each theory seem promising. Here we analyzed the SARs of butterfly and moth assemblages on islands differing in size and isolation. We tested whether species traits modify the SAR and the response to isolation. In addition to the expected overall effects on the area, traits related to each of the two theories increased the model fit, from 69% up to 90%. Steeper slopes have been shown to have a particularly higher sensitivity to area, which was indicated by species with restricted range (slope = 0.82), narrow dietary niche (slope= 0.59), low abundance (slope= 0.52), and low reproductive potential (slope = 0.51). We concluded that considering species traits by analyzing SARs yields considerable potential for unifying island biogeography theory and niche theory, and that the systematic and predictable effects observed when considering traits can help to guide conservation and management actions.

  16. The functional biogeography of species

    DEFF Research Database (Denmark)

    Carstensen, Daniel W.; Dalsgaard, Bo; Svenning, Jens-Christian


    Biogeographical systems can be analyzed as networks of species and geographical units. Within such a biogeographical network, individual species may differ fundamentally in their linkage pattern, and therefore hold different topological roles. To advance our understanding of the relationship...... and a wide altitudinal range-span are related to a wide distribution on many islands and across several biogeographical modules. On the other hand, species restricted to interior forest are mainly characterized as peripherals and, thus, have narrow and localized distributions within biogeographical modules...

  17. Malassezia Species and Pityriasis Versicolor

    National Research Council Canada - National Science Library

    Rodoplu, Gulin


    Malassezia species are found in part of the normal human cutaneous commensal flora, however it has been known for many years that the Malassezia yeasts are associated with a number of different human...

  18. Phase One Protected Species Valuation (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Nonmarket valuation research has produced economic value estimates for a variety of threatened, endangered, and rare species around the world. Although over 40 value...

  19. Phase Two Protected Species Valuation (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Nonmarket valuation research has produced economic value estimates for a variety of threatened, endangered, and rare species around the world. Although over 40 value...

  20. Theoretical microbial ecology without species (United States)

    Tikhonov, Mikhail


    Ecosystems are commonly conceptualized as networks of interacting species. However, partitioning natural diversity of organisms into discrete units is notoriously problematic and mounting experimental evidence raises the intriguing question whether this perspective is appropriate for the microbial world. Here an alternative formalism is proposed that does not require postulating the existence of species as fundamental ecological variables and provides a naturally hierarchical description of community dynamics. This formalism allows approaching the species problem from the opposite direction. While the classical models treat a world of imperfectly clustered organism types as a perturbation around well-clustered species, the presented approach allows gradually adding structure to a fully disordered background. The relevance of this theoretical construct for describing highly diverse natural ecosystems is discussed.

  1. The Candida Pathogenic Species Complex (United States)

    Turner, Siobhán A.; Butler, Geraldine


    Candida species are the most common causes of fungal infection. Approximately 90% of infections are caused by five species: Candida albicans, Candida glabrata, Candida tropicalis, Candida parapsilosis, and Candida krusei. Three (C. albicans, C. tropicalis, and C. parapsilosis) belong to the CTG clade, in which the CTG codon is translated as serine and not leucine. C. albicans remains the most commonly isolated but is decreasing relative to the other species. The increasing incidence of C. glabrata is related to its reduced susceptibility to azole drugs. Genome analysis suggests that virulence in the CTG clade is associated with expansion of gene families, particularly of cell wall genes. Similar independent processes took place in the C. glabrata species group. Gene loss and expansion in an ancestor of C. glabrata may have resulted in preadaptations that enabled pathogenicity. PMID:25183855

  2. Infrared spectra of mineral species

    CERN Document Server

    Chukanov, Nikita V


    This book details more than 3,000 IR spectra of more than 2,000 mineral species collected during last 30 years. It features full descriptions and analytical data of each sample for which IR spectrum was obtained.

  3. The atlas of endangered species

    National Research Council Canada - National Science Library

    Mackay, R


    Vividly illustrated with full-color maps and detailed graphics, The Atlas of Endangered Species catalogs the inhabitants of a wide variety of ecosystems, including forests, mangroves, and coral reefs...

  4. Species doubling and effective Lagrangians

    Energy Technology Data Exchange (ETDEWEB)

    Creutz, M.; Tytgat, M.


    Coupling gauge fields to the chiral currents from an effective Lagrangian for pseudoscalar mesons naturally gives rise to a species doubling phenomenon similar to that seen with fermionic fields in lattice gauge theory. 17 refs.

  5. Achromobacter species in cystic fibrosis

    DEFF Research Database (Denmark)

    Hansen, C R; Pressler, T; Ridderberg, W


    Achromobacter species leads to chronic infection in an increasing number of CF patients. We report 2 cases of Achromobacter ruhlandii cross-infection between patients after well-described indirect contact....

  6. Evolution of mutualism between species

    Energy Technology Data Exchange (ETDEWEB)

    Post, W.M.; Travis, C.C.; DeAngelis, D.L.


    Recent theoretical work on mutualism, the interaction between species populations that is mutually beneficial, is reviewed. Several ecological facts that should be addressed in the construction of dynamic models for mutualism are examined. Basic terminology is clarified. (PSB)

  7. Species Egalitarianism and the Environment

    Directory of Open Access Journals (Sweden)

    Kristin Tiili


    Full Text Available A general anthropocentric view of the human species affects the environment and is a major contributing factor in the environmental crisis we are currently facing. A species egalitarian society would have positive effects on the crisis, and particularly in regards to short term goals of decreasing greenhouse gases in the atmosphere. Additionally it would increase the quality of life and alleviate the suffering of countless beings, nonhuman animals and humans alike.

  8. The Origin of Organizational Species


    Ugo Pagano


    The paper argues that some of the limitations and problems examined by Darwin and modern biologists in relation to the working of natural selection in the case of speciation may be one aspect of more general rules which have some counterpart in the competitive selection of organisational species in capitalist economic development. In biology the laws of structure and change that characterise the selection among species are very different from those that characterise the selection of the membe...

  9. Chapter 07: Species description pages (United States)

    Alex C. Wiedenhoeft


    These pages are written to be the final step in the identification process; you will be directed to them by the key in Chapter 6. Each species or group of similar species in the same genus has its own set of pages. The information in the first page describes the characteristics of the wood covered in the manual. The page shows images of similar or confusable woods,...

  10. Collective behaviour across animal species. (United States)

    DeLellis, Pietro; Polverino, Giovanni; Ustuner, Gozde; Abaid, Nicole; Macrì, Simone; Bollt, Erik M; Porfiri, Maurizio


    We posit a new geometric perspective to define, detect, and classify inherent patterns of collective behaviour across a variety of animal species. We show that machine learning techniques, and specifically the isometric mapping algorithm, allow the identification and interpretation of different types of collective behaviour in five social animal species. These results offer a first glimpse at the transformative potential of machine learning for ethology, similar to its impact on robotics, where it enabled robots to recognize objects and navigate the environment.

  11. Collective behaviour across animal species (United States)

    Delellis, Pietro; Polverino, Giovanni; Ustuner, Gozde; Abaid, Nicole; Macrì, Simone; Bollt, Erik M.; Porfiri, Maurizio


    We posit a new geometric perspective to define, detect, and classify inherent patterns of collective behaviour across a variety of animal species. We show that machine learning techniques, and specifically the isometric mapping algorithm, allow the identification and interpretation of different types of collective behaviour in five social animal species. These results offer a first glimpse at the transformative potential of machine learning for ethology, similar to its impact on robotics, where it enabled robots to recognize objects and navigate the environment.

  12. The Colletotrichum gloeosporioides species complex (United States)

    Weir, B.S.; Johnston, P.R.; Damm, U.


    The limit of the Colletotrichum gloeosporioides species complex is defined genetically, based on a strongly supported clade within the Colletotrichum ITS gene tree. All taxa accepted within this clade are morphologically more or less typical of the broadly defined C. gloeosporioides, as it has been applied in the literature for the past 50 years. We accept 22 species plus one subspecies within the C. gloeosporioides complex. These include C. asianum, C. cordylinicola, C. fructicola, C. gloeosporioides, C. horii, C. kahawae subsp. kahawae, C. musae, C. nupharicola, C. psidii, C. siamense, C. theobromicola, C. tropicale, and C. xanthorrhoeae, along with the taxa described here as new, C. aenigma, C. aeschynomenes, C. alatae, C. alienum, C. aotearoa, C. clidemiae, C. kahawae subsp. ciggaro, C. salsolae, and C. ti, plus the nom. nov. C. queenslandicum (for C. gloeosporioides var. minus). All of the taxa are defined genetically on the basis of multi-gene phylogenies. Brief morphological descriptions are provided for species where no modern description is available. Many of the species are unable to be reliably distinguished using ITS, the official barcoding gene for fungi. Particularly problematic are a set of species genetically close to C. musae and another set of species genetically close to C. kahawae, referred to here as the Musae clade and the Kahawae clade, respectively. Each clade contains several species that are phylogenetically well supported in multi-gene analyses, but within the clades branch lengths are short because of the small number of phylogenetically informative characters, and in a few cases individual gene trees are incongruent. Some single genes or combinations of genes, such as glyceraldehyde-3-phosphate dehydrogenase and glutamine synthetase, can be used to reliably distinguish most taxa and will need to be developed as secondary barcodes for species level identification, which is important because many of these fungi are of biosecurity

  13. Terrestrial animals as invasive species and as species at risk from invasions (United States)

    Deborah M. Finch; Dean Pearson; Joseph Wunderle; Wayne Arendt


    Including terrestrial animal species in the invasive species strategy plan is an important step in invasive species management. Invasions by nonindigenous species threaten nearly 50 percent of imperiled native species in the United States and are the Nation's second leading cause of species endangerment. Invasion and conversion of native habitats by exotic species...

  14. 50 CFR 600.509 - Prohibited species. (United States)


    ... 50 Wildlife and Fisheries 8 2010-10-01 2010-10-01 false Prohibited species. 600.509 Section 600... species. (a) The owner or operator of each FFV must minimize its catch or receipt of prohibited species... its catch of fish received as soon as possible and return all prohibited species and species parts to...

  15. Malassezia Species and Pityriasis Versicolor

    Directory of Open Access Journals (Sweden)

    Gulin Rodoplu


    Full Text Available Malassezia species are found in part of the normal human cutaneous commensal flora, however it has been known for many years that the Malassezia yeasts are associated with a number of different human diseases ranging from pityriasis versicolor to seborrhoeic dermatitis. In addition, since the 1980s, they have been reported as causing opportunistic systemic infections. The taxonomy of Malassezia spp. has recently been modified to include 13 obligatorily lipophilic species, plus one non-obligatorily lipophilic species, which only rarely colonizes human hosts and currently the genus consist 14 species as M. furfur, M. pachydermatis, M. sympodialis, M. globosa, M. obtusa, M. slooffiae, M. restricta, M. dermatis, M. japonica, M. nana, M. yamatoensis, M. caprae, M. equina, M. cuniculi. Fastidious growth requirements of Malassezia yeasts defied the initial attempts to culture these organisms and their true identification and the relationship between different species only became apparent with the application of modern molecular techniques. The causative fungus is seen especially in such seborrheic areas as the scalp, face, trunk and upper back. Under the influence of various exogenous or endogenous predisposing factors, these yeasts change from the blastospore form to the mycelial form and become pathogenic. Diagnosis of pityriasis versicolor which is caused by Malassezia species is generally easy and lies on the basis of its clinical appearance and can be confirmed by mycological examination. The diagnosisis is mainly based on direct examination with potassium hydroxide (KOH and demonstration that represents pseudohyphae and blastoconidia as the typical %u201Cspaghetti and meatballs%u201D pattern. Characteristic features of the genus Malassezia include a distinctive morphology and an affinity for lipids in culture. Culture is necessary to recover the infecting strain, especially for epidemiologic purposes and also to test its antifungal susceptibility

  16. Genome Size and Species Diversification. (United States)

    Kraaijeveld, Ken


    Theoretically, there are reasons to believe that large genome size should favour speciation. Several major factors contributing to genome size, such as duplications and transposable element activity have been proposed to facilitate the formation of new species. However, it is also possible that small genome size promotes speciation. For example, selection for genome reduction may be resolved in different ways in incipient species, leading to incompatibilities. Mutations and chromosomal rearrangements may also be more stably inherited in smaller genomes. Here I review the following lines of empirical evidence bearing on this question: (i) Correlations between genome size and species richness of taxa are often negative. (ii) Fossil evidence in lungfish shows that the accumulation of DNA in the genomes of this group coincided with a reduction in species diversity. (iii) Estimates of speciation interval in mammals correlate positively with genome size. (iv) Genome reductions are inferred at the base of particular species radiations and genome expansions at the base of others. (v) Insect clades that have been increasing in diversity up to the present have smaller genomes than clades that have remained stable or have decreased in diversity. The general pattern emerging from these observations is that higher diversification rates are generally found in small-genome taxa. Since diversification rates are the net effect of speciation and extinction, large genomes may thus either constrain speciation rate, increase extinction rate, or both. I argue that some of the cited examples are unlikely to be explained by extinction alone.

  17. Searching for species in haloarchaea. (United States)

    Papke, R Thane; Zhaxybayeva, Olga; Feil, Edward J; Sommerfeld, Katrin; Muise, Denise; Doolittle, W Ford


    Prokaryotic (bacterial and archaeal) species definitions and the biological concepts that underpin them entail clustering (cohesion) among individuals, in terms of genome content and gene sequence similarity. Homologous recombination can maintain gene sequence similarity within, while permitting divergence between, clusters and is thus the basis for recent efforts to apply the Biological Species Concept in prokaryote systematics and ecology. In this study, we examine isolates of the haloarchaeal genus Halorubrum from two adjacent ponds of different salinities at a Spanish saltern and a natural saline lake in Algeria by using multilocus sequence analysis. We show that, although clusters can be defined by concatenation of multiple marker sequences, barriers to exchange between them are leaky. We suggest that no nonarbitrary way to circumscribe "species" is likely to emerge for this group, or by extension, to apply generally across prokaryotes. Arbitrary criteria might have limited practical use, but still must be agreed upon by the community.

  18. Scandinavian Oncophorus (Bryopsida, Oncophoraceae: species, cryptic species, and intraspecific variation

    Directory of Open Access Journals (Sweden)

    Lars Hedenäs


    Full Text Available Scandinavian members of the acrocarpous moss genus Oncophorus were revised after field observations had suggested unrecognized diversity. Based on molecular (nuclear: internal transcribed spacers 1 and 2, ITS; plastid: trnGUCC G2 intron, trnG, rps4 gene + trnS-rps4 spacer, rps4 and morphological evidence, four morphologically distinguishable species are recognized, Oncophorus elongatus (I.Hagen Hedenäs, O. integerrimus Hedenäs sp. nov. (syn. O. virens var. elongatus Limpr., O. virens (Hedw. Brid., and O. wahlenbergii Brid. (O. sardous Herzog, syn. nov.. Oncophorus elongatus was earlier recognized, but much of its variation was hidden within O. wahlenbergii. Its circumscription is here expanded to include plants with long leaves having mostly denticulate or sharply denticulate upper margins and with long and narrow marginal cells in the basal portion of the sheathing leaf lamina. The new species O. integerrimus sp. nov. differs from O. virens in having more loosely incurved leaves and entire or almost entire upper leaf margins. Besides these characters, the species in the respective pairs differ in quantitative features of the leaf lamina cells. Several cryptic entities were found, in several cases as molecularly distinct as some of the morphologically recognizable species, and phylogeographic structure is present within O. elongatus and O. virens.

  19. [Reactive nitrogen and oxygen species]. (United States)

    Puzanowska-Tarasiewicz, Helena; Kuźmicka, Ludmiła; Tarasiewicz, Mirosław


    Reactive nitrogen species (RNS) and reactive oxygen species (ROS) are mainly free radicals which including non-paired electrons. They are constantly formed as side products of biological reactions. They are also generated directly and indirectly by the cells which were exposed to environmental stress, i.e., UV radiation, ionizing radiation, xenobioticts, light-absorbing compounds, e.g., porphyrines. These factors, which are a source of free radicals, initiate a significant signaling cascade inducing many changes in cells, such as cancerogenic transformation or cell death. Cells protect themselves against oxidative stress by means of antioxidative enzymes and compounds which in their structure have redox sensitive spots.

  20. Estimating species abundance from occurrence


    He, F.; Gaston, K.J.


    The number of individuals, or the abundance, of a species\\ud in an area is a fundamental ecological parameter and a\\ud critical consideration when making management and conservation decisions (Andrewartha and Birch 1954; Krebs\\ud 1978; Gaston 1994; Caughley and Gunn 1996). However,\\ud unless the scale is very fine or localized (e.g., in a measurable habitat or a forest stand), abundance is not readily determined. At coarse or regional scales for many species, information on commonness and rar...

  1. The Colletotrichum acutatum species complex (United States)

    Damm, U.; Cannon, P.F.; Woudenberg, J.H.C.; Crous, P.W.


    Colletotrichum acutatum is known as an important anthracnose pathogen of a wide range of host plants worldwide. Numerous studies have reported subgroups within the C. acutatum species complex. Multilocus molecular phylogenetic analysis (ITS, ACT, TUB2, CHS-1, GAPDH, HIS3) of 331 strains previously identified as C. acutatum and other related taxa, including strains from numerous hosts with wide geographic distributions, confirmed the molecular groups previously recognised and identified a series of novel taxa. Thirty-one species are accepted, of which 21 have not previously been recognised. Colletotrichum orchidophilum clusters basal to the C. acutatum species complex. There is a high phenotypic diversity within this complex, and some of the species appear to have preferences to specific hosts or geographical regions. Others appear to be plurivorous and are present in multiple regions. In this study, only C. salicis and C. rhombiforme formed sexual morphs in culture, although sexual morphs have been described from other taxa (especially as laboratory crosses), and there is evidence of hybridisation between different species. One species with similar morphology to C. acutatum but not belonging to this species complex was also described here as new, namely C. pseudoacutatum. Taxonomic novelties: New combinations - Colletotrichum limetticola (R.E. Clausen) Damm, P.F. Cannon & Crous, C. lupini (Bondar) Damm, P.F. Cannon & Crous, C. salicis (Fuckel) Damm, P.F. Cannon & Crous. New species - C. acerbum Damm, P.F. Cannon & Crous, C. australe Damm, P.F. Cannon & Crous, C. brisbanense Damm, P.F. Cannon & Crous, C. cosmi Damm, P.F. Cannon & Crous, C. costaricense Damm, P.F. Cannon & Crous, C. cuscutae Damm, P.F. Cannon & Crous, C. guajavae Damm, P.F. Cannon & Crous, C. indonesiense Damm, P.F. Cannon & Crous, C. johnstonii Damm, P.F. Cannon & Crous, C. kinghornii Damm, P.F. Cannon & Crous, C. laticiphilum Damm, P.F. Cannon & Crous, C. melonis Damm, P.F. Cannon & Crous, C

  2. The Colletotrichum boninense species complex (United States)

    Damm, U.; Cannon, P.F.; Woudenberg, J.H.C.; Johnston, P.R.; Weir, B.S.; Tan, Y.P.; Shivas, R.G.; Crous, P.W.


    Although only recently described, Colletotrichum boninense is well established in literature as an anthracnose pathogen or endophyte of a diverse range of host plants worldwide. It is especially prominent on members of Amaryllidaceae, Orchidaceae, Proteaceae and Solanaceae. Reports from literature and preliminary studies using ITS sequence data indicated that C. boninense represents a species complex. A multilocus molecular phylogenetic analysis (ITS, ACT, TUB2, CHS-1, GAPDH, HIS3, CAL) of 86 strains previously identified as C. boninense and other related strains revealed 18 clades. These clades are recognised here as separate species, including C. boninense s. str., C. hippeastri, C. karstii and 12 previously undescribed species, C. annellatum, C. beeveri, C. brassicicola, C. brasiliense, C. colombiense, C. constrictum, C. cymbidiicola, C. dacrycarpi, C. novae-zelandiae, C. oncidii, C. parsonsiae and C. torulosum. Seven of the new species are only known from New Zealand, perhaps reflecting a sampling bias. The new combination C. phyllanthi was made, and C. dracaenae Petch was epitypified and the name replaced with C. petchii. Typical for species of the C. boninense species complex are the conidiogenous cells with rather prominent periclinal thickening that also sometimes extend to form a new conidiogenous locus or annellations as well as conidia that have a prominent basal scar. Many species in the C. boninense complex form teleomorphs in culture. Taxonomic novelties: New combination - Colletotrichum phyllanthi (H. Surendranath Pai) Damm, P.F. Cannon & Crous. Name replacement - C. petchii Damm, P.F. Cannon & Crous. New species - C. annellatum Damm, P.F. Cannon & Crous, C. beeveri Damm, P.F. Cannon, Crous, P.R. Johnst. & B. Weir, C. brassicicola Damm, P.F. Cannon & Crous, C. brasiliense Damm, P.F. Cannon, Crous & Massola, C. colombiense Damm, P.F. Cannon, Crous, C. constrictum Damm, P.F. Cannon, Crous, P.R. Johnst. & B. Weir, C. cymbidiicola Damm, P.F. Cannon

  3. Vegetation composition and structure influences bird species ...

    African Journals Online (AJOL)

    Vegetation composition and structure influences bird species community assemblages in the highland agricultural landscape of Nyandarua, Kenya. ... Bird species diversity increased with increasing density of woody plant species and vegetation structural heterogeneity. Two gradients of increasing vegetation structural ...

  4. Species and speciation in the fossil record

    National Research Council Canada - National Science Library

    Allmon, Warren D; Yacobucci, Margaret M


    "Although the species is one of the fundamental units of biological classification, there is remarkably little consensus among biologists about what defines a species, even within distinct subdisciplines...

  5. 77 FR 23740 - Invasive Species Advisory Committee (United States)


    ... Advisory Committee (ISAC). Comprised of 30 nonfederal invasive species experts and stakeholders from across... CONTACT: Kelsey Brantley, National Invasive Species Council Program Specialist and ISAC Coordinator, (202...

  6. Community composition and species richness of parasitoids infesting Yponomeuta species in the Netherlands

    NARCIS (Netherlands)

    Cleary, Daniel F.R.


    Parasitoid assemblages infesting Yponomeuta species in the Netherlands were investigated. Parasitoid species richness and community composition were related to host species, habitat, temporal and spatial variation. Both community structure and species richness did not differ among habitats. There

  7. Man...An Endangered Species? (United States)

    Department of the Interior, Washington, DC.

    The general theme of this 1968 yearbook is that man is a threatened species, facing overpopulation and unbridled technology - both self induced. The presentation is broad, relating to many aspects of conservation and natural resources in the United States in a descriptive, non-technical style. The yearbook is divided into major topics: Land…

  8. Georgia Species at Risk Project (United States)


    layers. In addition to Taxodium ascendens, other woody species may include Nyssa biflora, Cephalanthus occidentalis, Liquidambar styraciflua, Clethra...occidentalis, Liquidambar styraciflua, Clethra alnifolia, Lyonia lucida, and Styrax americanus.” This small patch Ecological System covers over 2900 acres...Cephalanthus occidentalis, Liquidambar styraciflua, Clethra alnifolia, Lyonia lucida, and Styrax americanus.” As mapped, this small patch Ecological

  9. Influenza vaccines for avian species (United States)

    Beginning in Southeast Asia, in 2003, a multi-national epizootic outbreak of H5N1 highly pathogenic avian influenza (HPAI) was identified in commercial poultry and wild bird species. This lineage, originally identified in Southern China in 1996 and then Hong Kong in 1997, caused severe morbidity an...

  10. Thromboelastography in Selected Avian Species

    DEFF Research Database (Denmark)

    Andersen, Sophie Susanna Strindberg; Nielsen, Tenna W; Ribeiro, Ângela M


    ) (n = 13), helmeted Guinea fowl ( Numida meleagris ) (n = 12), Amazon parrots (Amazona species) (n = 9), Humboldt penguins ( Spheniscus humboldti ) (n = 6), and domestic chickens (n = 16). Activated partial thromboplastin time, prothrombin time, and fibrinogen were measured as a means of comparison...

  11. storey and canopy tree species

    African Journals Online (AJOL)

    different tree species. The data presented here would therefore help in the planning and management of tropical forest reserves and development of management inteiventions to enhance forest productivity and ecological balance. Materials and methods. Study site. Kalinzu Forest Reserve is a tropical rain forest locate<.! in.

  12. EAMJ Species April 10.indd

    African Journals Online (AJOL)


    Apr 4, 2010 ... the market were tested for example voriconazole. This study therefore paves the way for more studies with larger sample sizes, and in different parts of the country in order to understand the local epidemiology of yeast species and to study the local epidemiological susceptibility patterns. These would.

  13. Perpetual flowering in strawberry species (United States)

    Studies have revealed genetic control of flowering patterns for seasonal flowering (SF) and perpetual flowering (PF) genotypes in the common garden strawberry, with associated links to gene homeologs in diploid alpine strawberry, F. vesca L. Within the genus Fragaria, 22 species and multiple subspec...

  14. and tulbaghia species (wild garlic)

    African Journals Online (AJOL)


    methiin), S-propyl cysteine sulfoxide. (PCSO, propiin), S-allyl-L-cysteine sulfoxide (ACSO, alliin) and S- (trans-1- propenyl)-L-cysteine sulfoxide (PeCSO, isoalliin) in considerable amounts in T. acutiloba. These compounds have been well known to occur in most Allium species. Also, the presence of lectin-like proteins.

  15. Botrytis species on bulb crops

    NARCIS (Netherlands)

    Lorbeer, J.W.; Seyb, A.M.; Boer, de M.; Ende, van den J.E.


    Abstract. A number of Botrytis species are pathogens of bulb crops. Botrytis squamosa (teleomorph= Botrytotinia squamosa) causal agent of botrytis leaf blight and B. allii the causal agent of botrytis neck rot are two of the most important fungal diseases of onion. The taxonomics of several of the

  16. Endangered Species: An Educator's Handbook. (United States)

    Smith, Jean, M., Comp.

    Presented are two articles, an annotated bibliography, and other information useful in teaching about endangered species, especially those found in Florida. The articles provide an ethical rationale, teaching suggestions, and a discussion of the value of wildlife. Descriptions of over 100 pertinent books, periodicals, movies, and filmstrips are in…

  17. SARS – virus jumps species

    Indian Academy of Sciences (India)

    SARS – virus jumps species. Coronavirus reshuffles genes; Rotteir et al, Rotterdam showed the virus to jump from cats to mouse cells after single gene mutation ? Human disease due to virus jumping from wild or domestic animals; Present favourite animal - the cat; - edible or domestic.

  18. Nickel Homeostasis in Helicobacter Species

    NARCIS (Netherlands)

    J. Stoof (Jeroen)


    textabstractGastric Helicobacter species are adapted to colonize the acidic environment of the stomach. Colonization with H pylori is life long if untreated, and can lead to gastritis, peptic ulcer disease and eventually to gastric cancer. Although H pylori is sensitive to many antibiotics in vitro,

  19. Comparing perilymph proteomes across species. (United States)

    Palmer, Jonathan C; Lord, Megan S; Pinyon, Jeremy L; Wise, Andrew K; Lovell, Nigel H; Carter, Paul M; Enke, Ya Lang; Housley, Gary D; Green, Rylie A


    Biological components of perilymph affect the electrical performance of cochlear implants. Understanding the perilymph composition of common animal models will improve the understanding of this impact and improve the interpretation of results from animal studies and how it relates to humans. Analysis and comparison of the proteomes of human, guinea pig, and cat perilymph. Multiple perilymph samples from both guinea pigs and cats were analysed via liquid chromatography with tandem mass spectrometry. Proteins were identified using the Mascot database. Human data were obtained from a published dataset. Proteins identified were refined to form a proteome for each species. Over 200 different proteins were found per species. There were 81, 39, and 64 proteins in the final human, guinea pig, and cat proteomes, respectively. Twenty-one proteins were common to all three species. Fifty-two percent of the cat proteome was found in the human proteome, and 31% of the guinea pig was common to human. The cat proteome had similar complexity to the human proteome in three protein classes, whereas the guinea pig had a similar complexity in two. The presence of albumin was significantly higher in human perilymph than in the other two species. Immunoglobulins were more abundant in the human than in the cat proteome. Perilymph proteomes were compared across three species. The degree of crossover of proteins of both guinea pig and cat with human indicate that these animals suitable models for the human cochlea, albeit the cat perilymph is a closer match. NA. Laryngoscope, 128:E47-E52, 2018. © 2017 The American Laryngological, Rhinological and Otological Society, Inc.

  20. Optimal conservation of migratory species.

    Directory of Open Access Journals (Sweden)

    Tara G Martin

    Full Text Available BACKGROUND: Migratory animals comprise a significant portion of biodiversity worldwide with annual investment for their conservation exceeding several billion dollars. Designing effective conservation plans presents enormous challenges. Migratory species are influenced by multiple events across land and sea-regions that are often separated by thousands of kilometres and span international borders. To date, conservation strategies for migratory species fail to take into account how migratory animals are spatially connected between different periods of the annual cycle (i.e. migratory connectivity bringing into question the utility and efficiency of current conservation efforts. METHODOLOGY/PRINCIPAL FINDINGS: Here, we report the first framework for determining an optimal conservation strategy for a migratory species. Employing a decision theoretic approach using dynamic optimization, we address the problem of how to allocate resources for habitat conservation for a Neotropical-Nearctic migratory bird, the American redstart Setophaga ruticilla, whose winter habitat is under threat. Our first conservation strategy used the acquisition of winter habitat based on land cost, relative bird density, and the rate of habitat loss to maximize the abundance of birds on the wintering grounds. Our second strategy maximized bird abundance across the entire range of the species by adding the constraint of maintaining a minimum percentage of birds within each breeding region in North America using information on migratory connectivity as estimated from stable-hydrogen isotopes in feathers. We show that failure to take into account migratory connectivity may doom some regional populations to extinction, whereas including information on migratory connectivity results in the protection of the species across its entire range. CONCLUSIONS/SIGNIFICANCE: We demonstrate that conservation strategies for migratory animals depend critically upon two factors: knowledge of

  1. Species recovery in the United States: Increasing the effectiveness of the Endangered Species Act (United States)

    Daniel M. Evans; Judy P. Che-Castaldo; Deborah Crouse; Frank W. Davis; Rebecca Epanchin-Niell; Curtis H. Flather; R. Kipp Frohlich; Dale D. Goble; Ya-Wei Li; Timothy D. Male; Lawrence L. Master; Matthew P. Moskwik; Maile C. Neel; Barry R. Noon; Camille Parmesan; Mark W. Schwartz; J. Michael Scott; Byron K. Williams


    The Endangered Species Act (ESA) has succeeded in shielding hundreds of species from extinction and improving species recovery over time. However, recovery for most species officially protected by the ESA - i.e., listed species - has been harder to achieve than initially envisioned. Threats to species are persistent and pervasive, funding has been insufficient...

  2. Allelopathy of plant species of pharmaceutical importance to cultivated species

    Directory of Open Access Journals (Sweden)

    Álisson Sobrinho Maranho


    Full Text Available This study aimed to identify possible allelopathic effects of leaf aqueous extracts of Baccharis dracunculifolia DC., Pilocarpus pennatifolius Lem., Cyperus rotundus L., Morus rubra L., Casearia sylvestris Sw., and Plectranthus barbatus Andr. on the germination and initial growth of Lactuca sativa L., Brassica oleracea L. cv. capitata, B. oleracea L. cv. italica, B. pekinenses L., B. campestris L., Lycopersicum esculentum Miller, and Eruca sativa L. To obtain the aqueous extracts, leaves previously dried at a 1g.10mL-1 concentration were used, diluted in six solutions (10, 30, 50, 70, 90, and 100% and compared to control, distilled water, with five replications of 10 seeds for all vegetable species. The aqueous extracts of all species showed allelopathic potential for germination of seeds, the germination speed index, and the initial growth of shoots and roots of vegetable crops. The aqueous extracts of C. rotundus and P. barbatus promoted lower and higher allelopathic effects, respectively, and the vegetal structure mostly affected by the extracts was the primary root. The results indicate the existence of allelopathic potential in the species tested, so there’s a need for adopting care procedures when cultivating vegetables with them.

  3. Floral reward in Ranunculaceae species

    Directory of Open Access Journals (Sweden)

    Bożena Denisow


    Full Text Available Floral reward is important in ecological and evolutionary perspectives and essential in pollination biology. For example, floral traits, nectar and pollen features are essential for understanding the functional ecology, the dynamics of pollen transport, competition for pollinator services, and patterns of specialization and generalization in plant–pollinator interactions. We believe to present a synthetic description in the field of floral reward in Ranunculaceae family important in pollination biology and indicating connections between ecological and evolutionary approaches. The links between insect visitors’ behaviour and floral reward type and characteristics exist. Ranunculaceae is a family of aboot 1700 species (aboot 60 genera, distributed worldwide, however the most abundant representatives are in temperate and cool regions of the northern and southern hemispheres. The flowers are usually radially symmetric (zygomorphic and bisexual, but in Aconitum, Aquilegia are bilaterally symmetric (zygomorphic. Most Ranunculaceae flowers offer no nectar, only pollen (e.g., Ranunculus, Adonis vernalis, Thalictrum, but numerous species create trophic niches for different wild pollinators (e.g. Osmia, Megachile, Bombus, Andrena (Denisow et al. 2008. Pollen is a source of protein, vitamins, mineral salts, organic acids and hormones, but the nutritional value varies greatly between different plant species. The pollen production can differ significantly between Ranunculacea species. The mass of pollen produced in anthers differ due to variations in the number of developed anthers. For example, interspecies differences are considerable, 49 anthers are noted in Aquilegia vulgaris, 70 anthers in Ranunculus lanuginosus, 120 in Adonis vernalis. A significant intra-species differences’ in the number of anthers are also noted (e.g. 41 to 61 in Aquilegia vulgaris, 23-45 in Ranunculus cassubicus. Pollen production can be up to 62 kg per ha for Ranunculus acer

  4. Iivestigations on hybrids in the genus Trifolium L. V. Fertility and cytogenetics of the hybrid Trifolium nigrescences Viv. x T. isthomocarpum Brot.

    Directory of Open Access Journals (Sweden)

    T. Kazimierski


    Full Text Available T.nigrescens (2n = 16 crosses with T .isthomocarpum (2n = 16 reciprocally. The viability of hybrid seedlings depend from the direction of the cross. At the time of diakinesis and metaphase I the average chromosome figures per PMC's was 7.014II, 0.005III, 0.435IV and 0.209I. For one half of the PMC's in the metaphase I the typical chromosome arrangement was 8II. The F1 plants was almost completly sterile. The causes of viability of hybrid seedlings depending on the direction of the cross, and the sterility of hybrid plants, are discussed.

  5. ICRAF Species Switchboard. Version 1.2

    DEFF Research Database (Denmark)

    Kindt, R.; Ordonez, J.; Smith, E.


    The current version of the Agroforestry Species Switchboard documents the presence of a total of 26,135 plant species (33,813 species including synonyms) across 19 web-based databases. When available, hyperlinks to information on the selected species in particular databases are provided. In total...

  6. 50 CFR 91.4 - Eligible species. (United States)


    ... 50 Wildlife and Fisheries 6 2010-10-01 2010-10-01 false Eligible species. 91.4 Section 91.4... species. Five or fewer of the species listed below will be identified as eligible each year; those eligible species will be provided to each contestant with the information provided in § 91.1. (a) Whistling...

  7. Dynamic conservation for migratory species (United States)

    Reynolds, Mark D.; Sullivan, Brian L.; Hallstein, Eric; Matsumoto, Sandra; Kelling, Steve; Merrifield, Matthew; Fink, Daniel; Johnston, Alison; Hochachka, Wesley M.; Bruns, Nicholas E.; Reiter, Matthew E.; Veloz, Sam; Hickey, Catherine; Elliott, Nathan; Martin, Leslie; Fitzpatrick, John W.; Spraycar, Paul; Golet, Gregory H.; McColl, Christopher; Morrison, Scott A.


    In an era of unprecedented and rapid global change, dynamic conservation strategies that tailor the delivery of habitat to when and where it is most needed can be critical for the persistence of species, especially those with diverse and dispersed habitat requirements. We demonstrate the effectiveness of such a strategy for migratory waterbirds. We analyzed citizen science and satellite data to develop predictive models of bird populations and the availability of wetlands, which we used to determine temporal and spatial gaps in habitat during a vital stage of the annual migration. We then filled those gaps using a reverse auction marketplace to incent qualifying landowners to create temporary wetlands on their properties. This approach is a cost-effective way of adaptively meeting habitat needs for migratory species, optimizes conservation outcomes relative to investment, and can be applied broadly to other conservation challenges. PMID:28845449

  8. Ranking species in mutualistic networks. (United States)

    Domínguez-García, Virginia; Muñoz, Miguel A


    Understanding the architectural subtleties of ecological networks, believed to confer them enhanced stability and robustness, is a subject of outmost relevance. Mutualistic interactions have been profusely studied and their corresponding bipartite networks, such as plant-pollinator networks, have been reported to exhibit a characteristic "nested" structure. Assessing the importance of any given species in mutualistic networks is a key task when evaluating extinction risks and possible cascade effects. Inspired in a recently introduced algorithm--similar in spirit to Google's PageRank but with a built-in non-linearity--here we propose a method which--by exploiting their nested architecture--allows us to derive a sound ranking of species importance in mutualistic networks. This method clearly outperforms other existing ranking schemes and can become very useful for ecosystem management and biodiversity preservation, where decisions on what aspects of ecosystems to explicitly protect need to be made.

  9. Charcoal anatomy of forest species

    Directory of Open Access Journals (Sweden)

    Graciela Inés Bolzon de Muñiz1


    Full Text Available Vegetal charcoal retains the anatomical structure of the wood and may permit its botanical identification, which depends on species characteristics, the charcoal fragments size and preservation state. Anatomical characterization of ten forest species charcoal was done envisaging the identification and control of illegal charcoal. Differences between gymnosperms and angiosperms are evident in carbonized wood. Vessel diameter was statistically different between wood and charcoal in Vatairea guianensis, Mezilaurus itauba, Calophyllum brasiliense e Qualea cf. acuminata, and vessel frequency in Vatairea guianensis, Manilkara huberi, Qualea cf. acuminata e Simarouba amara. The anatomical structure from wood, in general aspects, is constant during carbonization process using temperature of 450°C, being possible to identify the material by using its cellular components.

  10. Population Genomics of Paramecium Species. (United States)

    Johri, Parul; Krenek, Sascha; Marinov, Georgi K; Doak, Thomas G; Berendonk, Thomas U; Lynch, Michael


    Population-genomic analyses are essential to understanding factors shaping genomic variation and lineage-specific sequence constraints. The dearth of such analyses for unicellular eukaryotes prompted us to assess genomic variation in Paramecium, one of the most well-studied ciliate genera. The Paramecium aurelia complex consists of ∼15 morphologically indistinguishable species that diverged subsequent to two rounds of whole-genome duplications (WGDs, as long as 320 MYA) and possess extremely streamlined genomes. We examine patterns of both nuclear and mitochondrial polymorphism, by sequencing whole genomes of 10-13 worldwide isolates of each of three species belonging to the P. aurelia complex: P. tetraurelia, P. biaurelia, P. sexaurelia, as well as two outgroup species that do not share the WGDs: P. caudatum and P. multimicronucleatum. An apparent absence of global geographic population structure suggests continuous or recent dispersal of Paramecium over long distances. Intergenic regions are highly constrained relative to coding sequences, especially in P. caudatum and P. multimicronucleatum that have shorter intergenic distances. Sequence diversity and divergence are reduced up to ∼100-150 bp both upstream and downstream of genes, suggesting strong constraints imposed by the presence of densely packed regulatory modules. In addition, comparison of sequence variation at non-synonymous and synonymous sites suggests similar recent selective pressures on paralogs within and orthologs across the deeply diverging species. This study presents the first genome-wide population-genomic analysis in ciliates and provides a valuable resource for future studies in evolutionary and functional genetics in Paramecium. © The Author 2017. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. All rights reserved. For permissions, please e-mail:

  11. Endophthalmitis caused by Klebsiella species. (United States)

    Sridhar, Jayanth; Flynn, Harry W; Kuriyan, Ajay E; Dubovy, Sander; Miller, Darlene


    To report the clinical presentation, antibiotic sensitivities, treatment strategies, and visual outcomes associated with endophthalmitis caused by Klebsiella species. A noncomparative consecutive case series. Microbiology database records were retrospectively reviewed for all patients with endophthalmitis caused by Klebsiella species from 1990 to 2012 at a large university referral center. The corresponding clinical records were then reviewed to evaluate the endophthalmitis clinical features and treatment outcomes. Seven patients were identified. Clinical settings included endogenous (n = 3), posttraumatic (n = 2), trabeculectomy bleb-associated (n = 1), and postpenetrating keratoplasty (n = 1). Five patients presented with hypopyon. Presenting visual acuity ranged from 20/60 to light perception in nonendogenous cases and 1/200 to light perception in endogenous cases. Klebsiella was sensitive to aminoglycosides, third-generation cephalosporins, and second- and third-generation fluoroquinolones in all cases. Initial treatment strategies were vitreous tap and injection (n = 4), pars plana vitrectomy with intravitreal antibiotics (n = 2), and anterior chamber tap and injection (n = 1). All three endogenous cases later underwent enucleation or evisceration. In nonendogenous cases, the final visual acuity was 20/70 or better in all 4 patients. Endophthalmitis caused by Klebsiella species is associated with poor visual outcomes. Endogenous cases had high rates of enucleation or evisceration.

  12. Electrophoretic identification of poritid species ( Anthozoa: Scleractinia) (United States)

    Garthwaite, R. L.; Potts, D. C.; Veron, J. E. N.; Done, T. J.


    Electrophoretic surveys of 13 enzyme-coding loci distinguished unambiguously five morphologically defined species of Porites and two species of Goniopora. Each species was identifiable solely by unique, qualitative banding patterns at 1 6 loci. Genetic distances give preliminary estimates that these Porites species diverged from common ancestors 8 22 Ma during the Miocene, and that the two Goniopora species diverged about 3.5 Ma in the Pliocene, assuming Porites evolved from Goniopora 55 million years ago (Ma).

  13. Alien species in the Finnish weed flora

    Directory of Open Access Journals (Sweden)



    Full Text Available The present study aimed at assessing the invasion of alien weed species in Finland based on a review of their occurrence in the Finnish weed flora. The evaluation was conducted for the three phases of the invasion process, i.e. introduction, naturalization and invasion. The literature review revealed that 815 alien weed species occur in Finland of which 314 are regarded as naturalized. Based on their occurrence in different climate zones, the risk of naturalization of new harmful alien weed species was deemed low for those species not currently found in Finland, but higher for species occurring as casual aliens in Finland. In the latter group, 10 species of concern were detected. Exploration of the distribution patterns of naturalized species within Finland revealed species occupancy to be dependent on the residence time of the species. Established neophytes can be expected to extend their ranges and to increase occupation of agricultural habitats in the future.;

  14. Natural Constraints to Species Diversification.

    Directory of Open Access Journals (Sweden)

    Eric Lewitus


    Full Text Available Identifying modes of species diversification is fundamental to our understanding of how biodiversity changes over evolutionary time. Diversification modes are captured in species phylogenies, but characterizing the landscape of diversification has been limited by the analytical tools available for directly comparing phylogenetic trees of groups of organisms. Here, we use a novel, non-parametric approach and 214 family-level phylogenies of vertebrates representing over 500 million years of evolution to identify major diversification modes, to characterize phylogenetic space, and to evaluate the bounds and central tendencies of species diversification. We identify five principal patterns of diversification to which all vertebrate families hold. These patterns, mapped onto multidimensional space, constitute a phylogenetic space with distinct properties. Firstly, phylogenetic space occupies only a portion of all possible tree space, showing family-level phylogenies to be constrained to a limited range of diversification patterns. Secondly, the geometry of phylogenetic space is delimited by quantifiable trade-offs in tree size and the heterogeneity and stem-to-tip distribution of branching events. These trade-offs are indicative of the instability of certain diversification patterns and effectively bound speciation rates (for successful clades within upper and lower limits. Finally, both the constrained range and geometry of phylogenetic space are established by the differential effects of macroevolutionary processes on patterns of diversification. Given these properties, we show that the average path through phylogenetic space over evolutionary time traverses several diversification stages, each of which is defined by a different principal pattern of diversification and directed by a different macroevolutionary process. The identification of universal patterns and natural constraints to diversification provides a foundation for understanding the

  15. The Invasive Species Forecasting System (United States)

    Schnase, John; Most, Neal; Gill, Roger; Ma, Peter


    The Invasive Species Forecasting System (ISFS) provides computational support for the generic work processes found in many regional-scale ecosystem modeling applications. Decision support tools built using ISFS allow a user to load point occurrence field sample data for a plant species of interest and quickly generate habitat suitability maps for geographic regions of management concern, such as a national park, monument, forest, or refuge. This type of decision product helps resource managers plan invasive species protection, monitoring, and control strategies for the lands they manage. Until now, scientists and resource managers have lacked the data-assembly and computing capabilities to produce these maps quickly and cost efficiently. ISFS focuses on regional-scale habitat suitability modeling for invasive terrestrial plants. ISFS s component architecture emphasizes simplicity and adaptability. Its core services can be easily adapted to produce model-based decision support tools tailored to particular parks, monuments, forests, refuges, and related management units. ISFS can be used to build standalone run-time tools that require no connection to the Internet, as well as fully Internet-based decision support applications. ISFS provides the core data structures, operating system interfaces, network interfaces, and inter-component constraints comprising the canonical workflow for habitat suitability modeling. The predictors, analysis methods, and geographic extents involved in any particular model run are elements of the user space and arbitrarily configurable by the user. ISFS provides small, lightweight, readily hardened core components of general utility. These components can be adapted to unanticipated uses, are tailorable, and require at most a loosely coupled, nonproprietary connection to the Web. Users can invoke capabilities from a command line; programmers can integrate ISFS's core components into more complex systems and services. Taken together, these

  16. Primate taxonomy: species and conservation. (United States)

    Rylands, Anthony B; Mittermeier, Russell A


    Primatology as a discrete branch of science involving the study of primate behavior and ecology took off in the 1960s after discovery of the importance of primates as models for biomedical research and the realization that primates provide insights into the evolutionary history of humans. Osman Hill's unfortunately incomplete monograph series on the comparative anatomy and taxonomy of the primates(1) and the Napiers' 1967 A Handbook of Living Primates(2) recorded the world's view of primate diversity at this time. This taxonomy remained the baseline for nearly three decades, with the diversity of each genus being represented by some species, but extensively as subspecies. Copyright © 2014 Wiley Periodicals, Inc.

  17. Arsenic Detoxification by Geobacter Species. (United States)

    Dang, Yan; Walker, David J F; Vautour, Kaitlin E; Dixon, Steven; Holmes, Dawn E


    Insight into the mechanisms for arsenic detoxification by Geobacter species is expected to improve the understanding of global cycling of arsenic in iron-rich subsurface sedimentary environments. Analysis of 14 different Geobacter genomes showed that all of these species have genes coding for an arsenic detoxification system (ars operon), and several have genes required for arsenic respiration (arr operon) and methylation (arsM). Genes encoding four arsenic repressor-like proteins were detected in the genome of G. sulfurreducens; however, only one (ArsR1) regulated transcription of the ars operon. Elimination of arsR1 from the G. sulfurreducens chromosome resulted in enhanced transcription of genes coding for the arsenic efflux pump (Acr3) and arsenate reductase (ArsC). When the gene coding for Acr3 was deleted, cells were not able to grow in the presence of either the oxidized or reduced form of arsenic, while arsC deletion mutants could grow in the presence of arsenite but not arsenate. These studies shed light on how Geobacter influences arsenic mobility in anoxic sediments and may help us develop methods to remediate arsenic contamination in the subsurface. This study examines arsenic transformation mechanisms utilized by Geobacter, a genus of iron-reducing bacteria that are predominant in many anoxic iron-rich subsurface environments. Geobacter species play a major role in microbially mediated arsenic release from metal hydroxides in the subsurface. This release raises arsenic concentrations in drinking water to levels that are high enough to cause major health problems. Therefore, information obtained from studies of Geobacter should shed light on arsenic cycling in iron-rich subsurface sedimentary environments, which may help reduce arsenic-associated illnesses. These studies should also help in the development of biosensors that can be used to detect arsenic contaminants in anoxic subsurface environments. We examined 14 different Geobacter genomes and found

  18. VIDAS Listeria species Xpress (LSX). (United States)

    Johnson, Ronald; Mills, John


    The AOAC GovVal study compared the VIDAS Listeria species Xpress (LSX) to the Health Products and Food Branch MFHPB-30 reference method for detection of Listeria on stainless steel. The LSX method utilizes a novel and proprietary enrichment media, Listeria Xpress broth, enabling detection of Listeria species in environmental samples with the automated VIDAS in a minimum of 26 h. The LSX method also includes the use of the chromogenic media, chromID Ottaviani Agosti Agar (OAA) and chromID Lmono for confirmation of LSX presumptive results. In previous AOAC validation studies comparing VIDAS LSX to the U.S. Food and Drug Administration's Bacteriological Analytical Manual (FDA-BAM) and the U.S. Department of Agriculture-Food Safety and Inspection Service (USDA-FSIS) reference methods, the LSX method was approved as AOAC Official Method 2010.02 for the detection of Listeria species in dairy products, vegetables, seafood, raw meats and poultry, and processed meats and poultry, and as AOAC Performance Tested Method 100501 in a variety of foods and on environmental surfaces. The GovVal comparative study included 20 replicate test portions each at two contamination levels for stainless steel where fractionally positive results (5-15 positive results/20 replicate portions tested) were obtained by at least one method at one level. Five uncontaminated controls were included. In the stainless steel artificially contaminated surface study, there were 25 confirmed positives by the VIDAS LSX assay and 22 confirmed positives by the standard culture methods. Chi-square analysis indicated no statistical differences between the VIDAS LSX method and the MFHPB-30 standard methods at the 5% level of significance. Confirmation of presumptive LSX results with the chromogenic OAA and Lmono media was shown to be equivalent to the appropriate reference method agars. The data in this study demonstrate that the VIDAS LSX method is an acceptable alternative method to the MFHPB-30 standard

  19. Placentation in different mammalian species. (United States)

    Chavatte-Palmer, Pascale; Tarrade, Anne


    The placenta is a complex, transient organ associated with viviparity, which is located at the interface of the dam and fetus during pregnancy. It is formed after attachment, or implantation, of the blastocyst on the uterine lining and derives from complex cellular and molecular interactions between uterine and embryonic tissues. In mammals, there are many forms of placentation but this organ has the same function in all species: it is responsible for orchestrating materno-fetal exchanges, together with endocrine and immunological functions. Copyright © 2016 Elsevier Masson SAS. All rights reserved.

  20. 50 CFR Table 2d to Part 679 - Species Codes-Non-FMP Species (United States)


    ... 50 Wildlife and Fisheries 9 2010-10-01 2010-10-01 false Species Codes-Non-FMP Species 2d Table 2d to Part 679 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT, NATIONAL OCEANIC AND... ALASKA Pt. 679, Table 2d Table 2d to Part 679—Species Codes—Non-FMP Species Species description Code...

  1. Metals in Mediterranean aquatic species. (United States)

    Iamiceli, AnnaLaura; Ubaldi, Alessandro; Lucchetti, Dario; Brambilla, Gianfranco; Abate, Vittorio; De Felip, Elena; De Filippis, Stefania P; Dellatte, Elena; De Luca, Silvia; Ferri, Fabiola; Fochi, Igor; Fulgenzi, AnnaRita; Iacovella, Nicola; Moret, Ivo; Piazza, Rossano; Roncarati, Alessandra; Melotti, Paolo; Fanelli, Roberto; Fattore, Elena; di Domenico, Alessandro; Miniero, Roberto


    Metals such as arsenic (As), cadmium (Cd), copper (Cu), chromium (Cr), nickel (Ni), lead (Pb), vanadium (V), have been determined in species of Mediterranean marine organisms collected from areas supposed to be at background contamination levels. The Inductively Coupled Plasma Mass Spectrometry (ICP-MS) approach was adopted for the determination of all the metals. Arsenic, Cd and Pb determined in the 42 samples, do not exceed the pertinent maximum level except a sample of hake. In wild fish, the concentration range for Cr, Ni, V and Cu was, respectively: 0.07-0.09, 87.6-124, 0.022-0.075 and 0.79-1.74 μg/g fresh weight (fw). The farmed fish samples show concentration levels below the wild fish ones, except for Cr which range at the same levels. Cadmium and Pb show a high sample number under the quantification limit. The elements do not bio-magnify among the species considered and appear to show low variations in relation to organisms' position in the food chain and at sampling sites. Copyright © 2015 Elsevier Ltd. All rights reserved.

  2. Brachiaria species affecting soil nitrification

    Directory of Open Access Journals (Sweden)

    Adalton Mazetti Fernandes


    Full Text Available Nitrification can lead to substantial losses of the applied N through nitrate leaching and N2O emission. The regulation of nitrification may be a strategy to improve fertilizer N recovery and increase its agronomic efficiency. The objective of this study was to evaluate the inhibiting capacity of nitrification in soil by Brachiaria species. The greenhouse experiment was conducted using pots with 10 dm³ of a Red Latosol sample. The treatments consisted of the cultivation of three forage species (Brachiaria brizantha, B. ruziziensis and B. decumbens and four n rates (0, 100, 200, and 300 mg/pot, and the control (without plants. In the absence of the forage plants, all N fertilization levels raised the N-NO3- soil levels, as a result of nitrification. The mineralization of organic matter supplied much of the N requirement of the forage plants and nitrification was influenced in the rhizosphere of B. brizantha; however, this effect was not high enough to alter the N-NH4+ level in the total soil volume of the pot.

  3. Phytochemistry of European Primula species. (United States)

    Colombo, Paola S; Flamini, Guido; Rodondi, Graziella; Giuliani, Claudia; Santagostini, Laura; Fico, Gelsomina


    The genus Primula is the largest among the Primulaceae and is widespread mainly in the cold and temperate regions of the Northern Hemisphere. Since the beginning of the Twentieth century, several studies on the phytochemical composition of different species of Primula have been carried out. The main constituents examined were tissue and epicuticular flavonoids and saponins, which are of therapeutic significance. Only in recent years studies of the volatiles emitted by leaves and flowers have been carried out as well, but they are restricted to a small number of species. Only a few authors have documented the morphology and function of glandular trichomes in relation to the production of flavonoids and volatile organic compounds (VOCs). The use of Primula in folk medicine is described in the literature. Investigation of the biological and pharmacological activities of Primula are reported. This study aims at providing a collection of publications on the genus Primula along with a critical revision of literature data. It focuses on the possible taxonomic significance of the secondary metabolites and on their ecological role as attractors for pollinators and deterrents against herbivores and parasites, in order to build the base for further studies. Copyright © 2017 Elsevier Ltd. All rights reserved.

  4. Why some plant species are rare.

    Directory of Open Access Journals (Sweden)

    G W Wieger Wamelink

    Full Text Available Biodiversity, including plant species diversity, is threatened worldwide as a result of anthropogenic pressures such as an increase of pollutants and climate change. Rare species in particular are on the verge of becoming extinct. It is still unclear as to why some plant species are rare and others are not. Are they rare due to: intrinsic reasons, dispersal capacity, the effects of management or abiotic circumstances? Habitat preference of rare plant species may play an important role in determining why some species are rare. Based on an extensive data set of soil parameters we investigated if rarity is due to a narrow habitat preference for abiotic soil parameters. For 23 different abiotic soil parameters, of which the most influential were groundwater-table, soil-pH and nutrient-contents, we estimated species responses for common and rare species. Based on the responses per species we calculated the range of occurrence, the range between the 5 and 95 percentile of the response curve giving the habitat preference. Subsequently, we calculated the average response range for common and rare species. In addition, we designed a new graphic in order to provide a better means for presentation of the results. The habitat preferences of rare species for abiotic soil conditions are significantly narrower than for common species. Twenty of the twenty-three abiotic parameters showed on average significantly narrower habitat preferences for rare species than for common species; none of the abiotic parameters showed on average a narrower habitat preference for common species. The results have major implications for the conservation of rare plant species; accordingly management and nature development should be focussed on the maintenance and creation of a broad range of environmental conditions, so that the requirements of rare species are met. The conservation of (abiotic gradients within ecosystems is particularly important for preserving rare species.

  5. Two new Pediopsis species and a new Ruandopsis species (Hemiptera: Cicadellidae: Macropsinae) from Madagascar. (United States)

    Yang, Liyuan; Dietrich, Christopher H; Zhang, Yalin


    Three new species, Pediopsis tripartita, P. subtilis and Ruandopsis elongata spp. nov., from Madagascar are described. These species represent the first records of their respective genera in Madagascar. Images of adults and genitalia of the three species are provided.

  6. 77 FR 69596 - Atlantic Highly Migratory Species; Advisory Panel for Atlantic Highly Migratory Species Southeast... (United States)


    ... National Oceanic and Atmospheric Administration RIN 0648-XC321 Atlantic Highly Migratory Species; Advisory Panel for Atlantic Highly Migratory Species Southeast Data, Assessment, and Review Workshops AGENCY... (AP) for Atlantic Highly Migratory Species (HMS) Southeast Data, Assessment, and Review (SEDAR...

  7. Molecular Diagnosis of Pathogenic Sporothrix Species

    NARCIS (Netherlands)

    Rodrigues, Anderson Messias; de Hoog, G Sybren; de Camargo, Zoilo Pires


    BACKGROUND: Sporotrichosis is a chronic (sub)cutaneous infection caused by thermodimorphic fungi in the order, Ophiostomatales. These fungi are characterized by major differences in routes of transmission, host predilections, species virulence, and susceptibilities to antifungals. Sporothrix species

  8. New species of Gelechiidae (Lepidoptera) from Ukraine. (United States)

    Bidzilya, Oleksiy V; Budashkin, Yury I


    Chrysoesthia halimionella, sp. n., Megacraspedus uzunsyrtus, sp. n., Aristotelia confusella, sp. n., and Dirhinosia interposita, sp. n., are described from Ukraine. Adults and genitalia of the new species are illustrated and compared with related species.

  9. Phaeomycotic cysts caused by Phoma species. (United States)

    Vasoo, Shawn; Yong, Lee Kien; Sultania-Dudani, Priyanka; Scorza, Mary Lou; Sekosan, Marin; Beavis, Kathleen G; Huhn, Gregory D


    Phoma species are primarily phytopathogens which have been reported to sporadically cause human disease. We report a patient with phaeohyphomycotic cysts caused by Phoma species, which were initially mistaken for ganglions. Copyright © 2011 Elsevier Inc. All rights reserved.

  10. Species concepts do matter in nematology. (United States)

    Ferris, V R


    Nematology is a taxon-based science, and a correct understanding of species and their relationships is basic to all nematological research. Modern methods of systematic analysis have reshaped issues concerning species recognition.

  11. Seed Cryopreservation of Halimium and Helianthemum Species

    National Research Council Canada - National Science Library

    Perez-Garcia, Felix; Gonzalez-Benito, Elena M


    Seed germination of four Halimium species [H. atriplicifolium (Lam.) Spach, H. halimifolium (L.) Willk., H. ocymoides (Lam.) Willk., H. umbellatum (L.) Spach ssp. viscosum (Willk.) O. Bòlos & Viso] and eight Helianthemum species...

  12. New taxonomy and the origin of species.

    Directory of Open Access Journals (Sweden)

    Shai Meiri


    Full Text Available The trend for elevating known subspecies to the status of species on the basis of inappropriate evidence can potentially divert important conservation funds away from other species.

  13. Genus paracoccidioides: Species recognition and biogeographic aspects

    National Research Council Canada - National Science Library

    Theodoro, Raquel Cordeiro; Teixeira, Marcus de Melo; Felipe, Maria Sueli Soares; Paduan, Karina Dos Santos; Ribolla, Paulo Martins; San-Blas, Gioconda; Bagagli, Eduardo


    ... (species S1, PS2, PS3), and Paracoccidioides lutzii. This work aimed to differentiate species within the genus Paracoccidioides, without applying multilocus sequencing, as well as to obtain knowledge of the possible speciation processes...

  14. Species and prevalence determination of Human Intestinal ...

    African Journals Online (AJOL)

    Ten parasites species, namely Ascaris lumbricoides, Schistosoma mansoni, Ancylostoma duodenale, Strongyloides stercoralis, Fasciola hepatica, Hymenolepis nana, Enterobius vermicularis, Entamoeba histolytica, Entamoeba coli, and Giardia lamblia were observed in the stool samples. The distribution of species in ...

  15. Antimicrobial susceptibility of bacterial species identified from ...

    African Journals Online (AJOL)

    Twelve different antibiotics were used against bacterial species to record their sensitivity. The antibiotics were amikacin, amoxicillin, ampicillin, cephalexin, chloramphenicol, erythromycin, gentamycin, kanamycin, neomycin, ofloxacin, sulphamethoxazole trimethoprim and tetracycline. The species that showed sensitivity to ...

  16. SIS - Species and Stock Administrative Data Set (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The Species and Stock Administrative data set within the Species Information System (SIS) defines entities within the database that serve as the basis for recording...

  17. Approaching invasive species in Madagascar | Kull | Madagascar ...

    African Journals Online (AJOL)

    invasive', the topic of invasive species has until recently received less attention here than in other island contexts. Some species, often alien to Madagascar and introduced by humans, have expanded their range rapidly and have had both ...

  18. Tetrameranthus (Annonaceae revisited including a new species

    Directory of Open Access Journals (Sweden)

    Lubbert Y.Th. Westra


    Full Text Available The taxonomic revision of the infrequently collected genus Tetrameranthus by Westra (1985 is updated. A new species is described from French Guiana and Amapá, Brazil, increasing the number of species in this genus to seven.

  19. New species of Cystolepiota from China

    Directory of Open Access Journals (Sweden)

    Meng-Lin Xu


    Full Text Available In this paper, a new species, Cystolepiota pseudofumosifolia, is introduced. C. pseudofumosifolia is characterized by granulose or powdery pileus with an anatomic structure that is loosely globose, as well as ellipsoid cells in chains in the pileus covering the cheilocystidia. This new species is compared to the related and similar Cystolepiota species in morphology and molecular phylogeny based on Internal transcribed spacer sequences. Both types of data support our specimens as a new species in the genus Cystolepiota.

  20. Some interesting species of the genus Ascochyta

    Directory of Open Access Journals (Sweden)

    Ewa Połeć


    Full Text Available The paper presents eleven species of Ascochyta recently collected in central and southern part of Poland. Two of them, Ascochyta bondarceviana Melnik and Ascochyta equiseti (Desm. Grove noted in Poland for the first time, are illustrated with microphotographs. In addition, nine other species are newly reported on their host plants species in the country. Short characteristics of the fungi species based on the collected specimens and the distribution maps of all fungi taxa are presented.

  1. Evidence for a general species time arearelationship


    Adler, P. B.; White, Ethan P.; Lauenroth, W. K.; Kaufman, D. M.; Rassweiler, A.; Rusak, J. A.


    The species-area relationship (SAR) plays a central role in biodiversity research, and recent work has increased awareness of its temporal analog, the species-time relationship (STR). Here we provide evidence for a general species-time-area-relationship (STAR), in which species number is a function of the area and time span of sampling, as well as their interaction. For eight assemblages ranging from lake zooplankton to desert rodents, this model outperformed a sampling-based model and two si...

  2. Linking Keystone Species and Functional Groups: A New Operational Definition of the Keystone Species Concept

    Directory of Open Access Journals (Sweden)

    Robert D. Davic


    Full Text Available The concept of the "keystone species" is redefined to allow for the a priori prediction of these species within ecosystems. A keystone species is held to be a strongly interacting species whose top-down effect on species diversity and competition is large relative to its biomass dominance within a functional group. This operational definition links the community importance of keystone species to a specific ecosystem process, e.g., the regulation of species diversity, within functional groups at lower trophic levels that are structured by competition for a limited resource. The a priori prediction of keystone species has applied value for the conservation of natural areas.

  3. The South African Species of Commiphora

    Directory of Open Access Journals (Sweden)

    J. J.A. van der Walt


    Full Text Available A revision of the South African species of Commiphora (Burseraceae is presented in which 2 keys are provided to the 18 species recognized. A comprehensive morphological study, including an anatomical study of the stems and leaves, was regarded as essential for an accurate delimitation of the different species. Maps, sketches and photographs serve for illustration.

  4. Unimodal models to relate species to environment

    NARCIS (Netherlands)

    Braak, ter C.J.F.


    To assess the impact of environmental change on biological communities knowledge about species-environment relationships is indispensable. Ecologists attempt to uncover the relationships between species and environment from data obtained from field surveys. In the survey, species are scored on their


    African Journals Online (AJOL)


    An endangered species is a population of organisms, which are at high risk of becoming extinct either due to loss of habitat, ... Key words: Endangered species, Extinct, Environmental degradation, Climate change, in-situ, ex-situ. INTRODUCTION .... management of flora and fauna with fauna species been of main interest.

  6. Discovery of a novel species of Bordetella (United States)

    Bordetella species are Gram-negative coccobacilli. There are currently nine described species that constitute the genus Bordetella. Historically, this genus is subdivided into two groups of species: the “classical” and “non-classical” Bordetella. The classical Bordetella are the most studied group r...

  7. Understanding species - level primate diversity in Madagascar ...

    African Journals Online (AJOL)

    Over the past couple of decades Madagascar has witnessed an explosion in the number of primate species generally recognized. Much of this proliferation can be traced less to increasing knowledge of the lemur fauna than to the complete replacement of biological notions of the species by the Phylogenetic Species ...

  8. Species rarity: definition, causes, and classification (United States)

    Curtis H. Flather; Carolyn Hull Sieg


    In virtually all ecological communities around the world, most species are represented by few individuals, and most individuals come from only a few of the most common species. Why this distribution of species abundances is so regularly observed among different taxonomic sets in geographically diverse systems is a question that has received considerable theoretical and...

  9. 75 FR 69698 - Invasive Species Advisory Committee (United States)


    ..., notice is hereby given of meetings of the Invasive Species Advisory Committee (ISAC). Comprised of 30.... The full ISAC will also consider a white paper entitled, Invasive Species and Climate Change, as drafted by the ISAC Task Team on Climate Change. DATES: Meeting of the Invasive Species Advisory Committee...

  10. Endangered Species & Biodiversity: A Classroom Project & Theme (United States)

    Lauro, Brook


    Students discover the factors contributing to species losses worldwide by conducting a project about endangered species as a component of a larger classroom theme of biodiversity. Groups conduct research using online endangered- species databases and present results to the class using PowerPoint. Students will improve computer research abilities…

  11. Environmental variables structuring Labeo species (Pisces ...

    African Journals Online (AJOL)

    Water depth and current speed, dissolved oxygen concentration and substrate types were the main environmental variables influencing the distribution of Labeo species in Malebo Pool and these species are accordingly divided in two groups. Three species: Labeo sorex, L. nasus and L. macrostomus prefer deep, rocky ...

  12. Aphid (Hemiptera: Aphididae) species determined on herbaceous ...

    African Journals Online (AJOL)

    This study aimed to find out the Aphidoidea species feeding on herbaceous and shrub plants of Bartýn province. As a result, total of 28 aphid species belonging to 14 genus and 4 tribes of the super family Aphidoidea were determined. Of these determined species, Aphis fabae Scopoli, Aphis farinosa J. F. Gmelin, Aphis ...

  13. Invasive Species Science Update (No. 8) (United States)

    Dean Pearson; Yvette Ortega; Jack Butler


    Invasive Species Science Updates are designed to keep managers and other users up-to-date with recently completed and ongoing research by RMRS scientists, as well as highlight breaking news related to invasive species issues. The newsletter is produced by the RMRS Invasive Species Working Group (ISWG), which is a core group of scientists who volunteer to coordinate...

  14. 22 CFR 216.5 - Endangered species. (United States)


    ... 22 Foreign Relations 1 2010-04-01 2010-04-01 false Endangered species. 216.5 Section 216.5 Foreign Relations AGENCY FOR INTERNATIONAL DEVELOPMENT ENVIRONMENTAL PROCEDURES § 216.5 Endangered species. It is A... endangered or threatened species and their critical habitats. The Initial Environmental Examination for each...

  15. 50 CFR 216.15 - Depleted species. (United States)


    ... 50 Wildlife and Fisheries 7 2010-10-01 2010-10-01 false Depleted species. 216.15 Section 216.15 Wildlife and Fisheries NATIONAL MARINE FISHERIES SERVICE, NATIONAL OCEANIC AND ATMOSPHERIC ADMINISTRATION... Prohibitions § 216.15 Depleted species. The following species or population stocks have been designated by the...

  16. 3 CFR - The Endangered Species Act (United States)


    ... 3 The President 1 2010-01-01 2010-01-01 false The Endangered Species Act Presidential Documents Other Presidential Documents Memorandum of March 3, 2009 The Endangered Species Act Memorandum for the Heads of Executive Departments and Agencies The Endangered Species Act (ESA), 16 U.S.C. 1531 et seq...

  17. Aphid (Hemiptera: Aphididae) species determined on herbaceous ...

    African Journals Online (AJOL)



    Jun 17, 2009 ... This study aimed to find out the Aphidoidea species feeding on herbaceous and shrub plants of Bartın province. As a result, total of 28 aphid species belonging to 14 genus and 4 tribes of the super family. Aphidoidea were determined. Of these determined species, Aphis fabae Scopoli, Aphis farinosa J. F..

  18. Isolation, Culture and Cryopreservation of Sarcocystis species (United States)

    More than 200 valid Sarcocystis species have been described in the parasitological literature. The developmental life cycle in the intermediate host and definitive host has only been described for a few species. The majority of species have been identified based solely on the presence of the sarcocy...

  19. Invasive Species Science Update (No. 4) (United States)

    Ned B. Klopfenstein; Brian W. Geils


    The fourth issue of Invasive Species Science Update has finally arrived. This newsletter has no set publication schedule, but our intent is to deliver invasive species information on a timely basis. The RMRS Invasive Species Working Group (ISWG) has been reorganized and recharged. General information on the ISWG is presented in a publication by Butler and others (2009...

  20. Invasive Species Science Update (No. 9) (United States)

    Justin Runyon


    This newsletter is designed to keep managers and other users up-to-date with recently completed and ongoing research by RMRS scientists, as well as to highlight breaking news related to invasive species issues. The newsletter is produced by the RMRS Invasive Species Working Group (ISWG), a core group of scientists who volunteer to disseminate RMRS invasive species...

  1. Options in dealing with marine alien species

    NARCIS (Netherlands)

    Pelt-Heerschap, van H.M.L.; Sneekes, A.C.; Foekema, E.M.


    Invasive species can have strong impact on the local ecosystem, not only substantial impact on the local ecosystem, but also on economy and human health. This review on marine alien species outlines aspects of prevention, eradication and control strategies. When managing invasive species, prevention

  2. Invasive Species Science Update (No. 7) (United States)

    Dean Pearson; Yvette Ortega; Jack Butler


    Invasive Species Science Updates are designed to keep managers and other users up-to-date with recently completed and ongoing research by RMRS scientists, as well as highlight breaking news related to invasive species issues. The newsletter is produced by the RMRS Invasive Species Working Group (ISWG), which is a core group of scientists who volunteer to coordinate...

  3. Invasive Species Science Update (No. 5) (United States)

    Dean Pearson; Yvette Ortega


    Welcome to the fifth issue of the Rocky Mountain Research Station's (RMRS) Invasive Species Science Update. The newsletter is produced by the RMRS Invasive Species Working Group (ISWG), which is a core group of scientists who volunteer to coordinate outreach of RMRS invasive species science to managers and the public. After publishing the past four newsletters, we...

  4. Do invasive plant species alter soil health? (United States)

    Invasive species may alter soil characteristics or interact with the soil microbial community to yield a competitive advantage. Our objectives were to determine: if invasive plant species alter soil properties important to soil health; and the long-term effects of invasive plant species on soil pro...

  5. Why Some Plant Species Are Rare

    NARCIS (Netherlands)

    Weiger Wamelink, G.W.; Goedhart, P.W.; Frissel, J.Y.


    Biodiversity, including plant species diversity, is threatened worldwide as a result of anthropogenic pressures such as an increase of pollutants and climate change. Rare species in particular are on the verge of becoming extinct. It is still unclear as to why some plant species are rare and others

  6. Demography of threatened tree species in Vietnam

    NARCIS (Netherlands)

    Chien, P.D.


    Demography of threatened tree species in Vietnam (Summary for the library) Effective conservation of threatened tree species requires information on natural dynamics and future prospects of populations of these species. Such information can be obtained from demographic studies. We investigated the

  7. Laboratory Maintenance of Nocardia Species. (United States)

    Dhakal, Dipesh; Sohng, Jae Kyung


    Nocardia spp. are aerobic, Gram-positive, catalase-positive, non-motile actinomycetes. Various species of the genus Nocardia have attracted attention due to their detrimental effects on human health. Recent discoveries, however, have exposed their importance as producers of bioactive compounds and degraders of complex organic compounds, as well as their involvement in biotransformation into valuable products. This unit includes general protocols for the laboratory maintenance of Nocardia spp., including growth in liquid medium, growth on solid agar, and long-term storage. Nocardia sp. CS682 (KCTC11297BP), isolated from soil collected in Jeonnam, Korea, is used as a prototype for explaining the considerations for efficient laboratory maintenance of Nocardia spp. Copyright © 2015 John Wiley & Sons, Inc.

  8. Multilocus species delimitation in the Crotalus triseriatus species group (Serpentes: Viperidae: Crotalinae), with the description of two new species. (United States)

    Bryson, Robert W; Linkem, Charles W; Dorcas, Michael E; Lathrop, Amy; Jones, Jason M; Alvarado-Díaz, Javier; Grünwald, Christoph I; Murphy, Robert W


    Members of the Crotalus triseriatus species group of montane rattlesnakes are widely distributed across the highlands of Mexico and southwestern USA. Although five species are currently recognized within the group, species limits remain to be tested. Genetic studies suggest that species may be paraphyletic and that at least one cryptic species may be present. We generate 3,346 base pairs of DNA sequence data from seven nuclear loci to test competing models of species delimitation in the C. triseriatus group using Bayes factor delimitation. We also examine museum specimens from the Trans-Mexican Volcanic Belt for evidence of cryptic species. We find strong support for a nine-species model and genetic and morphological evidence for recognizing two new species within the group, which we formally describe here. Our results suggest that the current taxonomy of the C. triseriatus species group does not reflect evolutionary history. We suggest several conservative taxonomic changes to the group, but future studies are needed to better clarify relationships among species and examine genetic patterns and structure within wide-ranging lineages.

  9. Species Conservation and Management: Case Studies (United States)

    Akcakaya, H.R.; Burgman, M.A.; Kindvall, O.; Wood, C.C.; Sjogren-Gulve, P.; Hatfield, J.S.; McCarthy, M.A.


    This edited volume is a collection of population and metapopulation models for a wide variety of species, including plants, invertebrates, fishes, amphibians, reptiles, birds, and mammals. Each chapter of the book describes the application of RAMAS GIS 4.0 to one species, with the aim of demonstrating how various life history characteristics of the species are incorporated into the model, and how the results of the model has been or can be used in conservation and management of the species. The book comes with a CD that includes a demo version of the program, and the data files for each species.

  10. Ecological impacts of non-native species (United States)

    Wilkinson, John W.


    Non-native species are considered one of the greatest threats to freshwater biodiversity worldwide (Drake et al. 1989; Allen and Flecker 1993; Dudgeon et al. 2005). Some of the first hypotheses proposed to explain global patterns of amphibian declines included the effects of non-native species (Barinaga 1990; Blaustein and Wake 1990; Wake and Morowitz 1991). Evidence for the impact of non-native species on amphibians stems (1) from correlative research that relates the distribution or abundance of a species to that of a putative non-native species, and (2) from experimental tests of the effects of a non-native species on survival, growth, development or behaviour of a target species (Kats and Ferrer 2003). Over the past two decades, research on the effects of non-native species on amphibians has mostly focused on introduced aquatic predators, particularly fish. Recent research has shifted to more complex ecological relationships such as influences of sub-lethal stressors (e.g. contaminants) on the effects of non-native species (Linder et al. 2003; Sih et al. 2004), non-native species as vectors of disease (Daszak et al. 2004; Garner et al. 2006), hybridization between non-natives and native congeners (Riley et al. 2003; Storfer et al. 2004), and the alteration of food-webs by non-native species (Nystrom et al. 2001). Other research has examined the interaction of non-native species in terms of facilitation (i.e. one non-native enabling another to become established or spread) or the synergistic effects of multiple non-native species on native amphibians, the so-called invasional meltdown hypothesis (Simerloff and Von Holle 1999). Although there is evidence that some non-native species may interact (Ricciardi 2001), there has yet to be convincing evidence that such interactions have led to an accelerated increase in the number of non-native species and cumulative impacts are still uncertain (Simberloff 2006). Applied research on the control, eradication, and

  11. The nuclear question: rethinking species importance in multi-species animal groups. (United States)

    Srinivasan, Umesh; Raza, Rashid Hasnain; Quader, Suhel


    1. Animals group for various benefits, and may form either simple single-species groups, or more complex multi-species associations. Multi-species groups are thought to provide anti-predator and foraging benefits to participant individuals. 2. Despite detailed studies on multi-species animal groups, the importance of species in group initiation and maintenance is still rated qualitatively as 'nuclear' (maintaining groups) or 'attendant' (species following nuclear species) based on species-specific traits. This overly simplifies and limits understanding of inherently complex associations, and is biologically unrealistic, because species roles in multi-species groups are: (i) likely to be context-specific and not simply a fixed species property, and (ii) much more variable than this dichotomy indicates. 3. We propose a new view of species importance (measured as number of inter-species associations), along a continuum from 'most nuclear' to 'least nuclear'. Using mixed-species bird flocks from a tropical rainforest in India as an example, we derive inter-species association measures from randomizations on bird species abundance data (which takes into account species 'availability') and data on 86 mixed-species flocks from two different flock types. Our results show that the number and average strength of inter-species associations covary positively, and we argue that species with many, strong associations are the most nuclear. 4. From our data, group size and foraging method are ecological and behavioural traits of species that best explain nuclearity in mixed-species bird flocks. Parallels have been observed in multi-species fish shoals, in which group size and foraging method, as well as diet, have been shown to correlate with nuclearity. Further, the context in which multi-species groups occur, in conjunction with species-specific traits, influences the role played by a species in a multi-species group, and this highlights the importance of extrinsic factors in

  12. Alien species on the coasts of Turkey

    Directory of Open Access Journals (Sweden)

    M.E. CINAR


    Full Text Available The compilation of data on alien species reported from the Turkish coasts yielded a total of 263 species belonging to 11 systematic groups, of which Mollusca had the highest number of species (85 species, followed by Crustacea (51, fishes (43 and phytobenthos (39. The Black Sea is represented by a total of 20 alien species, the Sea of Marmara by 48 species, the Aegean Sea by 98 species and the Levantine Sea by 202 species. The majority of aliens found in the Black Sea and the Sea of Marmara were transported via shipping, whereas the Levantine coast is extensively subjected to Lessepsian migration. Benthic habitats (soft and hard substrata comprise 76% of the total alien species and the pelagic environment is inhabited by thirty-nine species. Almost 50% of aliens collected from the Turkish coasts were found only at 0-10 m depth. Eight species occur at depths deeper than 100 m. The impacts of aliens on the benthic and pelagic ecosystems are presented.

  13. Petal anatomy of four Justicia (Acanthaceae) species (United States)

    Amirul-Aiman, A. J.; Noraini, T.; Nurul-Aini, C. A. C.; Ruzi, A. R.


    Comparative anatomical study on flower petals was studied in four selected Justicia species from Peninsular Malaysia, i.e. J. comata (L.) Lam., J. carnea Lindl. J. betonica Linn. and J. procumbens L with the objective to provide useful data for species identification and differentiation within the genus of Justicia. Methods used in this study are mechanical scrapping on the leaf surfaces and observation under light microscope. Finding in this study has shown that all species are sharing similar type of anticlinal walls pattern, which is sinuous pattern. Two or more type of trichomes is present in all species studied and this character can be used to differentiate Justicia species. Simple multicellular trichomes are found to be present in all species studied. Justicia betonica can be isolated from other species by the existence of cyclo-paracytic stomata on the petal surfaces.

  14. Genomic definition of species. Revision 1

    Energy Technology Data Exchange (ETDEWEB)

    Crkvenjakov, R.; Dramanac, R.


    A genome is the sum total of the DNA sequences in the cells of an individual organism. The common usage that species possess genomes comes naturally to biochemists, who have shown that all protein and nucleic acid molecules are at the same time species and individual-specific, with minor individual variations being superimposed on a consensus sequence that is constant for a species. By extension, this property is attributed to the common features of DNA in the chromosomes of members of a given species and is called (species) genome. The definition of species based on chromosomes, genes, or genome common to its member organisms has been implied or mentioned in passing numerous times. Some population biologists think that members of species have similar ``homeostatic genotypes,`` which are to a degree resistant to mutation or environmental change in the production of a basic phenotype.

  15. Genomic definition of species. Revision 2

    Energy Technology Data Exchange (ETDEWEB)

    Crkvenjakov, R.; Drmanac, R.


    A genome is the sum total of the DNA sequences in the cells of an individual organism. The common usage that species possess genomes comes naturally to biochemists, who have shown that all protein and nucleic acid molecules are at the same time species- and individual-specific, with minor individual variations being superimposed on a consensus sequence that is constant for a species. By extension, this property is attributed to the common features of DNA in the chromosomes of members of a given species and is called species genome. Our proposal for the definition of a biological species is as follows: A species comprises a group of actual and potential biological organisms built according to a unique genome program that is recorded, and at least in part expressed, in the structures of their genomic nucleic acid molecule(s), having intragroup sequence differences which can be fully interconverted in the process of organismal reproduction.

  16. Effects of tree species composition on within-forest distribution of understorey species

    NARCIS (Netherlands)

    Oijen, van D.; Feijen, M.; Hommel, P.W.F.M.; Ouden, den J.; Waal, de R.W.


    Question: Do tree species, with different litter qualities, affect the within-forest distribution of forest understorey species on intermediate to base-rich soils? Since habitat loss and fragmentation have caused ancient forest species to decline, those species are the main focus of this study.

  17. Program SimAssem: software for simulating species assemblages and estimating species richness (United States)

    Gordon C. Reese; Kenneth R. Wilson; Curtis H. Flather


    1. Species richness, the number of species in a defined area, is the most frequently used biodiversity measure. Despite its intuitive appeal and conceptual simplicity, species richness is often difficult to quantify, even in well surveyed areas, because of sampling limitations such as survey effort and species detection probability....

  18. Four new species of Pteromalus Swederus (Hymenoptera: Chalcidoidea: Pteromalidae) and redescriptions of three other species

    NARCIS (Netherlands)

    Gijswijt, M.J.


    A key to the European species of the Pteromalus altus group is presented. The relationship between this group and species of the genus Euphorbia (Euphorbiaceae) is confirmed. One new species: P. villosae, associated with Euphorbia villosa Waldst. & presented. Two new species of the albipennis

  19. [Pharmacognosy study of Verbascum species]. (United States)

    Török, Tamás; Varga, Erzsébet


    The mullein (Verbascum phlomoides L., V thapsus L., V. thapsiforme Schrad., V. speciosum L.) is a medicinal herb known and used for a long time, especially in traditional Turkish medicine. The aims of our study were to identify the species and study the plant's major active substances both qualitatively and quantitatively, comparing it to data found in scientific literature. The plants were identified as probable hybrids of V. phlomoides and V. thapsiforme. Microscopic analysis of the flowers showed no major difference between the specimens. The diameter of both stomata and pollen we observed was around 15-20 μm. Important flavonoids like rutin and quercetin were identified. Dosage resulted in a 0.135% total flavonoid aglycone content. (expressed as hypericin) and a 1.3% total flavonoid glycoside content (expressed as rutoside). Thin layer chromatography from saponines revealed two spots. A hemolytic index of 13095 was also determined. Repeating the dosage experiment a year later resulted in significantly lower flavonoid aglycone and glycoside content (0.006% and 0.95% respectively) as well as a hemolytic index of approximately 4000.

  20. Can natural selection favour altruism between species? (United States)

    Wyatt, G A K; West, S A; Gardner, A


    Darwin suggested that the discovery of altruism between species would annihilate his theory of natural selection. However, it has not been formally shown whether between-species altruism can evolve by natural selection, or why this could never happen. Here, we develop a spatial population genetic model of two interacting species, showing that indiscriminate between species helping can be favoured by natural selection. We then ask if this helping behaviour constitutes altruism between species, using a linear-regression analysis to separate the total action of natural selection into its direct and indirect (kin selected) components. We show that our model can be interpreted in two ways, as either altruism within species, or altruism between species. This ambiguity arises depending on whether or not we treat genes in the other species as predictors of an individual's fitness, which is equivalent to treating these individuals as agents (actors or recipients). Our formal analysis, which focuses upon evolutionary dynamics rather than agents and their agendas, cannot resolve which is the better approach. Nonetheless, because a within-species altruism interpretation is always possible, our analysis supports Darwin's suggestion that natural selection does not favour traits that provide benefits exclusively to individuals of other species. © 2013 The Authors. Journal of Evolutionary Biology © 2013 European Society For Evolutionary Biology.

  1. Species longevity in North American fossil mammals. (United States)

    Prothero, Donald R


    Species longevity in the fossil record is related to many paleoecological variables and is important to macroevolutionary studies, yet there are very few reliable data on average species durations in Cenozoic fossil mammals. Many of the online databases (such as the Paleobiology Database) use only genera of North American Cenozoic mammals and there are severe problems because key groups (e.g. camels, oreodonts, pronghorns and proboscideans) have no reliable updated taxonomy, with many invalid genera and species and/or many undescribed genera and species. Most of the published datasets yield species duration estimates of approximately 2.3-4.3 Myr for larger mammals, with small mammals tending to have shorter species durations. My own compilation of all the valid species durations in families with updated taxonomy (39 families, containing 431 genera and 998 species, averaging 2.3 species per genus) yields a mean duration of 3.21 Myr for larger mammals. This breaks down to 4.10-4.39 Myr for artiodactyls, 3.14-3.31 Myr for perissodactyls and 2.63-2.95 Myr for carnivorous mammals (carnivorans plus creodonts). These averages are based on a much larger, more robust dataset than most previous estimates, so they should be more reliable for any studies that need species longevity to be accurately estimated. © 2013 International Society of Zoological Sciences, Institute of Zoology/Chinese Academy of Sciences and Wiley Publishing Asia Pty Ltd.

  2. A Theory of Flagship Species Action

    Directory of Open Access Journals (Sweden)

    Paul Jepson


    Full Text Available The flagship species approach is an enduring strategy in conservation. Academic discussion on flagship species has focussed on two dimensions: on what basis should they be selected and how have they been put to use. Here we consider a third dimension, namely the manner in which flagship species act and have the capacity to galvanise and influence conservation outcomes. Drawing on concepts from the social sciences, viz. affordance, framing, and actor-networks; we discuss examples of flagship species to propose a theory of flagship species action. In brief, our theory posits that a flagship species is one with traits that afford the assembly of relatively coherent networks of associations with ideational elements located in pre-existing cultural framings. These associations give rise to opportunities to align with deep cultural frames, contemporary cultural phenomena and political economy such that when a conservation action is introduced, forms of agency cause the species and human publics to change. The species becomes re-framed (or reinvigorated as a cultural asset speaking for a wider nature, publics and political agendas. Further our theory posits that species with traits that enrol in idea networks incorporating human fears, will have limited flagship capacity. This is because the ability of the representations produced to align with frames incorporating collective aspirations is constrained. In terms of applied conservation practice, our theory suggests that: a key criteria for selecting potential flagship species is presence in existing cultural frames, that effective deployment of flagship species requires an understanding of the species′ cultural associations, and a species ability to galvanise action may be limited to certain times and places. Furthermore, once deployed conservation interests will never have full control over the flagship species: it may act in uncertain and unexpected ways.

  3. Illuminating geographical patterns in species' range shifts. (United States)

    Grenouillet, Gaël; Comte, Lise


    Species' range shifts in response to ongoing climate change have been widely documented, but although complex spatial patterns in species' responses are expected to be common, comprehensive comparisons of species' ranges over time have undergone little investigation. Here, we outline a modeling framework based on historical and current species distribution records for disentangling different drivers (i.e. climatic vs. nonclimatic) and assessing distinct facets (i.e. colonization, extirpation, persistence, and lags) of species' range shifts. We used extensive monitoring data for stream fish assemblages throughout France to assess range shifts for 32 fish species between an initial period (1980-1992) and a contemporary one (2003-2009). Our results provide strong evidence that the responses of individual species varied considerably and exhibited complex mosaics of spatial rearrangements. By dissociating range shifts in climatically suitable and unsuitable habitats, we demonstrated that patterns in climate-driven colonization and extirpation were less marked than those attributed to nonclimatic drivers, although this situation could rapidly shift in the near future. We also found evidence that range shifts could be related to some species' traits and that the traits involved varied depending on the facet of range shift considered. The persistence of populations in climatically unsuitable areas was greater for short-lived species, whereas the extent of the lag behind climate change was greater for long-lived, restricted-range, and low-elevation species. We further demonstrated that nonclimatic extirpations were primarily related to the size of the species' range, whereas climate-driven extirpations were better explained by thermal tolerance. Thus, the proposed framework demonstrated its potential for markedly improving our understanding of the key processes involved in range shifting and also offers a template for informing management decisions. Conservation strategies

  4. A new species of Calogalesus Kieffer from China (Hymenoptera, Diapriidae with a key to World species

    Directory of Open Access Journals (Sweden)

    Jun Feng


    Full Text Available A new species of Calogalesus Kieffer, 1912, C. sinicus sp. n., is described and illustrated, collected from a Chinese prickly ash (Zanthoxylum bungeanum Maxim. orchard in Yunnan province of China. This is the third described species of the genus in the World. The new species can be distinguished from the other two described Calogalesus species by the head profile, proportions of the antennal segments, tridentate mandible, and mandible length. A key to World species of the genus is provided.

  5. Bovine Eimeria species in Austria. (United States)

    Koutny, H; Joachim, A; Tichy, A; Baumgartner, W


    Bovine eimeriosis is considered to be of considerable importance for the productivity and health of cattle worldwide. Despite the importance of cattle farming in Austria, little is known in this country about the abundance and distribution of bovine Eimeria spp. The objective of this study was to obtain detailed information about the occurrence of different Eimeria spp. on Austrian dairy farms. Fecal samples from individual calves (n = 868) from 296 farms all over Austria (82 districts) were collected. Additionally, each farmer was questioned about the occurrence of calf diarrhea, and about the knowledge on coccidiosis and possible control measures. On 97.97% of the investigated farms, calves excreted Eimeria oocysts, and 83.67% of the individual samples were positive. After sporulation of positive samples pooled from each farm, 11 Eimeria species were found, with E. bovis (in 65.54% of the samples and 27.74% of the farms), E.zuernii (63.85%/13.86%), E. auburnensis (56.76%/13.41%) and E. ellipsoidalis (54.05%/14.38%) being the most prevalent, followed by E. alabamensis (45.61%/11.56%), E. subspherica (35.14%/5.5.05%), E. cylindrica (33.11%/7.00%), and E. canadensis (31.08%/7.74%). E. wyomingensis, E. pellita and E. bukidnonensis were only found sporadically (3.04-4.73% of the samples and 0.16-0.59% of the farms). Mixed infections were present on all farms (2-9 Eimeria species/farm). Prevalences by state provinces were high throughout with 77.1-87.9% of the samples and 93.8-100% of the farms. Lower Austria had the highest percentage of positive farms, and Vorarlberg the lowest. Individual OPG (oocysts per gram of feces) values were generally low; 75% of the samples had an OPG of 1,000 or less. The highest detected OPG was 72,400. The mean OPG was 2,525 with above average numbers in Tirol, Carinthia, and Lower Austria. The mean OPG values were significantly positively correlated with the cattle density in the different districts. The majority of the samples were from

  6. Aging and immortality in unicellular species. (United States)

    Florea, Michael


    It has been historically thought that in conditions that permit growth, most unicellular species do not to age. This was particularly thought to be the case for symmetrically dividing species, as such species lack a clear distinction between the soma and the germline. Despite this, studies of the symmetrically dividing species Escherichia coli and Schizosaccharomyces pombe have recently started to challenge this notion. They indicate that E. coli and S. pombe do age, but only when subjected to environmental stress. If true, this suggests that aging may be widespread among microbial species in general, and that studying aging in microbes may inform other long-standing questions in aging. This review examines the recent evidence for and against replicative aging in symmetrically dividing unicellular organisms, the mechanisms that underlie aging, why aging evolved in these species, and how microbial aging fits into the context of other questions in aging. Copyright © 2017 Elsevier B.V. All rights reserved.

  7. Alien Species of EU Concern in Romania

    Directory of Open Access Journals (Sweden)

    Anastasiu Paulina


    Full Text Available Of the 37 species of the European Union concern eight are already present and two present a future potential risk for Romania. This paper brings updated information regarding these species in Romania. The presence of eight invasive alien species of concern to the European Union have already been recorded in Romania: two plant species Cabomba caroliniana and Heracleum sosnowskyi, two crustaceans Orconectes limosus and Eriocheir sinensis, two fish species Pseudorasbora parva and Perccottus glenii, one reptile Trachemys scripta and one mammal Myocastor coypus. Other two species of Union concern (Lithobates catesbeianus and Procyon lotor may soon become invaders in Romania. We emphasize the urgent need to assess their current distribution and impact or potential to establish and possible impact at national level.

  8. Choosing the right species in research. (United States)

    Mann, Michael D


    When designing animal studies, investigators must choose a species that is appropriate for the research. In this paper, the author examines various criteria that can be used to guide this selection. He discusses the concepts of phylogenetic group and sentience and finds them not to be useful in the selection of appropriate species in biomedical research. He identifies other criteria that are more useful as justifications for species selection, including susceptibility to a targeted disease process, tendency to engage in a targeted behavior, suitable size for the experimental techniques to be used, presence of a large body of data relevant to the study, species specificity (the species itself is the target of the research), intergenerational interval, similarity to humans, contractual specification and existing guidelines. He proposes that investigators should use these justifications, and perhaps others, to choose the most scientifically appropriate species for animal studies.

  9. Metabolite production by species of Stemphylium

    DEFF Research Database (Denmark)

    Olsen, Kresten Jon Kromphardt; Rossman, Amy; Andersen, Birgitte


    Morphology and phylogeny has been used to distinguish members of the plant pathogenic fungal genus Stemphylium. A third method for distinguishing species is by chemotaxonomy. The main goal of the present study was to investigate the chemical potential of Stemphylium via HPLC-UV-MS analysis, while...... also exploring the potential of chemotaxonomy as a robust identification method for Stemphylium. Several species were found to have species-specific metabolites, while other species were distinguishable by a broader metabolic profile rather than specific metabolites. Many previously described...... metabolites were found to be important for distinguishing species, while some unknown metabolites were also found to have important roles in distinguishing species of Stemphylium. This study is the first of its kind to investigate the chemical potential of Stemphylium across the whole genus....

  10. Weighted species richness outperforms species richness as predictor of biotic resistance. (United States)

    Henriksson, Anna; Yu, Jun; Wardle, David A; Trygg, Johan; Englund, Göran


    The species richness hypothesis, which predicts that species-rich communities should be better at resisting invasions than species-poor communities, has been empirically tested many times and is often poorly supported. In this study, we contrast the species richness hypothesis with four alternative hypotheses with the aim of finding better descriptors of invasion resistance. These alternative hypotheses state that resistance to invasions is determined by abiotic conditions, community saturation (i.e., the number of resident species relative to the maximum number of species that can be supported), presence/absence of key species, or weighted species richness. Weighted species richness is a weighted sum of the number of species, where each species' weight describes its contribution to resistance. We tested these hypotheses using data on the success of 571 introductions of four freshwater fish species into lakes throughout Sweden, i.e., Arctic char (Salvelinus alpinus), tench (Tinca tinca), zander (Sander lucioperca), and whitefish (Coregonus lavaretus). We found that weighted species richness best predicted invasion success. The weights describing the contribution of each resident species to community resistance varied considerably in both strength and sign. Positive resistance weights, which indicate that species repel invaders, were as common as negative resistance weights, which indicate facilitative interactions. This result can be contrasted with the implicit assumption of the original species richness hypothesis, that all resident species have negative effects on invader success. We argue that this assumption is unlikely to be true in natural communities, and thus that we expect that weighted species richness is a better predictor of invader success than the actual number of resident species.

  11. Effects of Rhizobium inoculation on Trifolium resupinatum antioxidant system under sulfur dioxide pollution

    Directory of Open Access Journals (Sweden)

    Ladan Bayat


    Full Text Available Introduction: Plant growth stimulating rhizobacteria are beneficial bacteria that can cause resistance to various stresses in plants. One of these stresses is SO2 air pollution. SO2 is known as a strong damaging air pollutant that limits growth of plants. The aim of this study is evaluation of the effects of bacterial inoculation with native and standard Rhizobium on Persian clover root growth and antioxidants activity and capacity under air SO2 pollution. Materials and methods: In this study, 31 days plants (no-inoculated and inoculated with two strains of Rhizobium exposed to the different concentrations of SO2 (0 as a control, 0.5, 1, 1.5 and 2 ppm for 5 consecutive days and 2 hours per day. Results: Results showed different concentrations of SO2 had a significant effect on Persian clover root weight and antioxidant system. Increasing SO2 stress decreased root fresh and dry weight and antioxidant capacities (IC50 and increased antioxidant activities (I% of Persian clover leaves significantly in comparison to the control plants (under 0 ppm and increased SOD, CAT and GPX activity. Inoculation of Persian clover plants with native and standard Rhizobium increased root weight and did not show a significant effect on antioxidants activity and capacity, but interaction between Rhizobium inoculation and SO2 treatment reduced significantly the stress effects of high concentration of SO2 on root growth and antioxidants activity and capacity. In fact, level of this change of root growth and antioxidant system under SO2 pollution stress in inoculated plants was lower than in the non-inoculated plants. Discussion and conclusion: As a result, an increase in SO2 concentration caused a decrease in root weight, increase in antioxidants activity and capacity of Persian clover. Inoculation with Rhizobium strains could alleviate the effect of SO2 pollution on antioxidant system by effects on root growth.


    Directory of Open Access Journals (Sweden)

    D. DUNEA


    Full Text Available Since the most important deficiency of forage stands is the inability to maintain adequate legume participation in mixture, it is the purpose of this paper to examine persistence in red clover in Târgoviste Plain eco-climatic conditions, together with the factors that affect it. Six red clover cultivars (Napoca-Tetra, Dacia Tetra, Vesna – tetraploids; Flora, Roxana, Start – diploids and one white clover diploid cultivar (Karina were used in pure culture and in mixture (50:50 with hybrid ryegrass (Zefir – tetraploid in a randomized block design with three replicates. Ground cover assessment in early spring was a suggestive indicator of the stand persistence to define the stability and sustainability boundaries of a reliable intensive system. In the beginning of the third year of cropping, ground cover was 54.33% for tetraploid cultivars (CV = 43.25%, and 67% for diploid cultivars (CV = 6.83% in pure stands. Same ground cover average of 27% was established both for tetraploid cultivars (CV = 36.47%, and for diploid cultivars (CV = 16.97% in mixtures with hybrid ryegrass.

  13. Expanding Red Clover (Trifolium pratense Usage in the Corn–Soy–Wheat Rotation

    Directory of Open Access Journals (Sweden)

    Sara L. Wyngaarden


    Full Text Available A common agronomic recommendation is under-seeding red clover to wheat in the corn–soy–wheat rotation. As a leguminous cover crop, red clover boosts agro-ecological resilience and productivity through nitrogen fixation, as well as non-nitrogen-related contributions, such as soil temperature and moisture regulation; reduction of erosion, runoff, and leaching; weed suppression; and interruption of pest and disease cycles. The objective of this paper is to propose a system that extends red clover usage into the corn phase of the corn–soy–wheat rotation as a living mulch. The system incorporates strip-tillage, strip-mowing, as well as banded herbicide and fertilizer application in order to maximize productivity and minimize competition. We analyzed the feasibility of this proposal by examining red clover’s adequacy for the proposed system in comparison with other broadleaf, leguminous cover crops, and assessed potential agro-ecological benefits. We considered logistical components of the proposition, including the use of strip-tillage, the application of precision technology, as well as the opportunity for further technological developments. We found that the proposed system has potential to increase agro-ecological sustainability, resilience, and the overall productivity of this three-year rotation. Thus, this easily-implemented practice should be formally studied.

  14. Morphological traits and yield of red clover (Trifolium pratense L. genotypes with varying inflorescence length

    Directory of Open Access Journals (Sweden)

    Tadeusz Zając


    Full Text Available Two red clover breeding strains with elongated flower heads, developed by one of the authors (H.Góral, were studied for forage and seed yield and compared to the standard cultivar 'Nike'. In addition, six morphological shoot traits were measured and their interrelations were computed. The leaf area index (LAI of successive cuts in two harvest years was determined on the basis of shoot density and leaf area of individual shoots. All three genotypes exhibited a high leaf area on shoots and a very high forage productivity. Among the morphological traits only shoot height could be a good selective criterion because it is easily measured, is significantly associated with shoot weight and shoot leaf area and its variation is low. Both strains, particularly the one with longer inflorescences belong to short-lived red clover forms giving satis factory forage and seed yields in the first harvest year. Depending on the strain the number of seeds per elongated inflorescence in the first harvest year was higher by 92 and 42% compared to that of a standard cultivar.

  15. Assessment of red clover (Trifolium pratense L. productivity in environmental stress

    Directory of Open Access Journals (Sweden)

    Marijana Tucak


    Full Text Available The frequency of extreme climatic events has increased due to global climate change. The objectives of this research were to investigate the influence of climatic conditions (precipitation and temperature on productivity of red clover cultivars and populations with a different genetic background and to identify those with high forage yield potential in environmental stress. Twenty-three red clover cultivars and populations of different geographical origin were studied during two consecutive growing seasons (2012 – extremely dry weather conditions, 2013 – humid weather conditions at the Agricultural Institute Osijek, Croatia. A field experiment was performed as a randomized block design with three replicates. Green mass and dry matter yield and plant height were measured in both growing seasons, whereas the seed yield was determined in the first year only. Results indicated the stability or adaptability of evaluated red clover cultivars and populations to a dry or humid weather production conditions. Croatian populations (CD-3, TP-2, TP-7 and cultivar Viva, Serbian cultivar K-17 and German cultivar Taifun exhibited the highest forage yield potential under both, dry and humid growing conditions and represent a valuable material to be used in red clover breeding programs dealing with tolerance to abiotic stress.

  16. Fate in Soil of Flavonoids Released from White Clover (Trifolium repens L.)

    DEFF Research Database (Denmark)

    Carlsen, Sandra C. K.; Pedersen, Hans A.; Spliid, Niels H.


    the presence in soil of bioactive secondary metabolites from clover has received limited attention. In this paper we examine for the first time the release of flavonoids both from field-grown white clover and from soil-incorporated white clover plants of flavonoids, as analyzed by LC-MS/MS. The dominant...... flavonoid aglycones were formononetin, medicarpin, and kaempferol. Soil-incorporated white clover plants generated high concentrations of the glycosides kaempferol-Rha-Xyl-Gal and quercetin-Xyl-Gal. Substantial amounts of kaempferol persisted in the soil for days while the other compounds were degraded...

  17. Atmospheric phenanthrene pollution modulates carbon allocation in red clover (Trifolium pratense L.)

    Energy Technology Data Exchange (ETDEWEB)

    Desalme, Dorine, E-mail: [Universite de Franche-Comte, CNRS, UMR 6249, Chrono-environnement, BP 71427, F-25211 Montbeliard Cedex (France); Binet, Philippe [Universite de Franche-Comte, CNRS, UMR 6249, Chrono-environnement, BP 71427, F-25211 Montbeliard Cedex (France); Epron, Daniel [Nancy Universite, UMR 1137, Ecologie et Ecophysiologie Forestieres, Faculte des Sciences, BP 70239, F- 54506 Vandoeuvre-les-Nancy Cedex (France); INRA, UMR 1137, Ecologie et Ecophysiologie Forestieres, Centre INRA de Nancy, F- 54280 Champenoux (France); Bernard, Nadine; Gilbert, Daniel; Toussaint, Marie-Laure [Universite de Franche-Comte, CNRS, UMR 6249, Chrono-environnement, BP 71427, F-25211 Montbeliard Cedex (France); Plain, Caroline [Nancy Universite, UMR 1137, Ecologie et Ecophysiologie Forestieres, Faculte des Sciences, BP 70239, F- 54506 Vandoeuvre-les-Nancy Cedex (France); INRA, UMR 1137, Ecologie et Ecophysiologie Forestieres, Centre INRA de Nancy, F- 54280 Champenoux (France); Chiapusio, Genevieve, E-mail: [Universite de Franche-Comte, CNRS, UMR 6249, Chrono-environnement, BP 71427, F-25211 Montbeliard Cedex (France)


    The influence of atmospheric phenanthrene (PHE) exposure (160 {mu}g m{sup -3}) during one month on carbon allocation in clover was investigated by integrative (plant growth analysis) and instantaneous {sup 13}CO{sub 2} pulse-labelling approaches. PHE exposure diminished plant growth parameters (relative growth rate and net assimilation rate) and disturbed photosynthesis (carbon assimilation rate and chlorophyll content), leading to a 25% decrease in clover biomass. The root-shoot ratio was significantly enhanced (from 0.32 to 0.44). Photosynthates were identically allocated to leaves while less allocated to stems and roots. PHE exposure had a significant overall effect on the {sup 13}C partitioning among clover organs as more carbon was retained in leaves at the expense of roots and stems. The findings indicate that PHE decreases root exudation or transfer to symbionts and in leaves, retains carbon in a non-structural form diverting photosynthates away from growth and respiration (emergence of an additional C loss process). - Highlights: > Atmospheric PHE decreased growth, biomass partitioning and C allocation in clover. > C allocation was modified in favor of leaves but at the expense of roots and stems. > In roots, a decreased carbon exudation or allocation to symbionts was proposed. > In leaves, carbon was retained in a non-structural form as secondary metabolites. > BVOC emission was suggested as another loss process than respiration and exudation. - Exposure of clover to atmospheric PHE affected not only its growth, but also biomass partitioning and C allocation among its organs.

  18. The transformer species of the Ukrainian Polissya

    Directory of Open Access Journals (Sweden)

    Protopopova Vira V.


    Full Text Available The investigation results of the transformer species participation (Echinocystis lobata (Michx. Torr. & A. Gray, Heracleum sosnowskyi Manden., Impatiens glandulifera Royle, I. parviflora DC., Reynoutria japonica Houtt., Robinia pseudoacacia L. in different plant communities of the Ukrainian Polissya (Forest zone of Ukraine are presented. All the abovementioned species are strong edificators in the region that can significantly change important species composition parameters of communities and character of landscape.

  19. Invasive species unchecked by climate - response

    DEFF Research Database (Denmark)

    Burrows, Michael T.; Schoeman, David S.; Duarte, Carlos M.


    Hulme points out that observed rates of range expansion by invasive alien species are higher than the median speed of isotherm movement over the past 50 years, which in turn has outpaced the rates of climate-associated range changes of marine and terrestrial species. This is not surprising, given...... the many ecological and anthropogenic processes that combine to facilitate the translocation of invasive species and the subsequent expansion of their populations. Successful alien species have been observed to rapidly expand their ranges until some limit, typically climate-imposed, is reached. Comparisons...

  20. Species - San Diego Co. [ds121 (United States)

    California Department of Resources — This is the Biological Observation Database point layer representing baseline observations of sensitive species (as defined by the MSCP) throughout San Diego County....

  1. A Five-Species Jungle Game.

    Directory of Open Access Journals (Sweden)

    Yibin Kang

    Full Text Available In this paper, we investigate the five-species Jungle game in the framework of evolutionary game theory. We address the coexistence and biodiversity of the system using mean-field theory and Monte Carlo simulations. Then, we find that the inhibition from the bottom-level species to the top-level species can be critical factors that affect biodiversity, no matter how it is distributed, whether homogeneously well mixed or structured. We also find that predators' different preferences for food affect species' coexistence.

  2. Molecular evolution of human species D adenoviruses. (United States)

    Robinson, Christopher M; Seto, Donald; Jones, Morris S; Dyer, David W; Chodosh, James


    Adenoviruses are medium-sized double stranded DNA viruses that infect vertebrates. Human adenoviruses cause an array of diseases. Currently there are 56 human adenovirus types recognized and characterized within seven species (A-G). Of those types, a majority belongs to species D. In this review, the genomic conservation and diversity are examined among human adenoviruses within species D, particularly in contrast to other human adenovirus species. Specifically, homologous recombination is presented as a driving force for the molecular evolution of human adenoviruses and the emergence of new adenovirus pathogens. Copyright © 2011 Elsevier B.V. All rights reserved.

  3. Taxonomy of Eurotium species isolated from meju. (United States)

    Hong, Seung-Beom; Kim, Dae-Ho; Lee, Mina; Baek, Seong-Yeol; Kwon, Soon-Wo; Samson, Robert A


    Eurotium strains were isolated from 77 loaves of meju (dried fermented soybeans), in various regions of Korea from 2008 to 2010. Morphological characteristics and DNA sequences of β-tubulin were examined. They were identified as Eurotium amstelodami, E. chevalieri, E. herbariorum, E. repens, E. rubrum, and E. tonophilum. Of these species, E. chevalieri and E. tonophilum had not been previously reported in association with meju. E. chevalieri and E. repens were the species isolated most frequently. This paper summarizes the morphological characteristics of six Eurotium species and provides key to identify the species from meju.

  4. Identification of species D, a new member of the Anopheles quadrimaculatus species complex: a biochemical key. (United States)

    Narang, S K; Kaiser, P E; Seawright, J A


    Sibling species D, a new member of the Anopheles quadrimaculatus species complex was identified in collections from Pickwick Lake, Tishomingo County, Mississippi and Choctawhatchee, Bay County, in West Florida. This species occurred sympatrically with the previously described species, A, B and C. Evidence for identification of species D includes diagnostic allozymes, a lack of polytene chromosomes in the ovarian nurse cells, and inviability of F1 progeny and lack of sperm transfer in hybridization crosses. An electrophoretic taxonomic key for distinguishing species D from A, B and C is presented.

  5. Two new Neotropical species of Drosophila peruensis species group (Diptera, Drosophilidae

    Directory of Open Access Journals (Sweden)

    Jonas S. Döge


    Full Text Available The Drosophila peruensis species group was recently proposed and includes four taxa: D. atalaia Vilela & Sene, 1982, D. boraceia Vilela & Val, 2004, D. pauliceia Ratcov & Vilela, 2007, and D. peruensis Wheeler, 1959. All these species have most of setae or setulae of mesonotum arinsing from dark spots, wings with crossveins darker (except in D. atalaia and hypandrium squared-shaped mostly fused to gonopods. Here, we describe two new species, Drosophila itacorubi sp. nov. and Drosophila paraitacorubi sp. nov., belonging to this species group. The male genitalia of these species are figured. An identification key to the D. peruensis species group is provided.

  6. DNA barcoding of endangered Indian Paphiopedilum species. (United States)

    Parveen, Iffat; Singh, Hemant K; Raghuvanshi, Saurabh; Pradhan, Udai C; Babbar, Shashi B


    The indiscriminate collections of Paphiopedilum species from the wild for their exotic ornamental flowers have rendered these plants endangered. Although the trade of these endangered species from the wild is strictly forbidden, it continues unabated in one or other forms that elude the current identification methods. DNA barcoding that offers identification of a species even if only a small fragment of the organism at any stage of development is available could be of great utility in scrutinizing the illegal trade of both endangered plant and animal species. Therefore, this study was undertaken to develop DNA barcodes of Indian species of Paphiopedilum along with their three natural hybrids using loci from both the chloroplast and nuclear genomes. The five loci tested for their potential as effective barcodes were RNA polymerase-β subunit (rpoB), RNA polymerase-β' subunit (rpoC1), Rubisco large subunit (rbcL) and maturase K (matK) from the chloroplast genome and nuclear ribosomal internal transcribed spacer (nrITS) from the nuclear genome. The intra- and inter-specific divergence values and species discrimination rates were calculated by Kimura 2 parameter (K2P) method using mega 4.0. The matK with 0.9% average inter-specific divergence value yielded 100% species resolution, thus could distinguish all the eight species of Paphiopedilum unequivocally. The species identification capability of these sequences was further confirmed as each of the matK sequences was found to be unique for the species when a blast analysis of these sequences was carried out on NCBI. nrITS, although had 4.4% average inter-specific divergence value, afforded only 50% species resolution. DNA barcodes of the three hybrids also reflected their parentage. © 2011 Blackwell Publishing Ltd.

  7. Selecting focal species as surrogates for imperiled species using relative sensitivities derived from occupancy analysis (United States)

    Silvano, Amy; Guyer, Craig; Steury, Todd; Grand, James B.


    Most imperiled species are rare or elusive and difficult to detect, which makes gathering data to estimate their response to habitat restoration a challenge. We used a repeatable, systematic method for selecting focal species using relative sensitivities derived from occupancy analysis. Our objective was to select suites of focal species that would be useful as surrogates when predicting effects of restoration of habitat characteristics preferred by imperiled species. We developed 27 habitat profiles that represent general habitat relationships for 118 imperiled species. We identified 23 regularly encountered species that were sensitive to important aspects of those profiles. We validated our approach by examining the correlation between estimated probabilities of occupancy for species of concern and focal species selected using our method. Occupancy rates of focal species were more related to occupancy rates of imperiled species when they were sensitive to more of the parameters appearing in profiles of imperiled species. We suggest that this approach can be an effective means of predicting responses by imperiled species to proposed management actions. However, adequate monitoring will be required to determine the effectiveness of using focal species to guide management actions.

  8. Factors influencing when species are first named and estimating global species richness

    Directory of Open Access Journals (Sweden)

    Mark J. Costello


    Full Text Available Estimates of global species richness should consider what factors influence the rate of species discovery at global scales. However, past studies only considered regional scales and/or samples representing <0.4% of all named species. Here, we analysed trends in the rate of description for all fish species (2% of all named species. We found that the number of species described has slowed for (a brackish compared to marine and freshwater species, (b large compared to small sized fish, (c geographically widespread compared to localised, (d species occurring in the tropics and northern hemisphere compared to southern hemisphere, and (e neritic (coastal species compared to pelagic (offshore species. Most (68% of the variation in year of description was related to geographic location and depth, and contrary to expectations, body size was a minor factor at just 6% (on a standardised scale. Thus most undiscovered species will have small geographic ranges, but will not necessarily be of smaller body size than currently known species. Accordingly, global assessments of how many species may exist on Earth need to account for geographic variation.

  9. Lichtheimia species exhibit differences in virulence potential.

    Directory of Open Access Journals (Sweden)

    Volker U Schwartze

    Full Text Available Although the number of mucormycosis cases has increased during the last decades, little is known about the pathogenic potential of most mucoralean fungi. Lichtheimia species represent the second and third most common cause of mucormycosis in Europe and worldwide, respectively. To date only three of the five species of the genus have been found to be involved in mucormycosis, namely L. corymbifera, L. ramosa and L. ornata. However, it is not clear whether the clinical situation reflects differences in virulence between the species of Lichtheimia or whether other factors are responsible. In this study the virulence of 46 strains of all five species of Lichtheimia was investigated in chicken embryos. Additionally, strains of the closest-related genus Dichotomocladium were tested. Full virulence was restricted to the clinically relevant species while all strains of L. hyalospora, L. sphaerocystis and Dichotomocladium species were attenuated. Although virulence differences were present in the clinically relevant species, no connection between origin (environmental vs clinical or phylogenetic position within the species was observed. Physiological studies revealed no clear connection of stress resistance and carbon source utilization with the virulence of the strains. Slower growth at 37°C might explain low virulence of L. hyalospora, L. spaherocystis and Dichotomocladium; however, similarly slow growing strains of L. ornata were fully virulent. Thus, additional factors or a complex interplay of factors determines the virulence of strains. Our data suggest that the clinical situation in fact reflects different virulence potentials in the Lichtheimiaceae.

  10. Red flags: correlates of impaired species recovery (United States)

    Jeffrey A. Hutchings; Stuart H. M. Butchart; Ben Collen; Michael K. Schwartz; Robin S. Waples


    Conservation biology research exhibits a striking but unhelpful dichotomy. Analyses of species decline, extinction risk, and threat mitigation typically encompass broad taxonomic and spatial scales. By contrast, most studies of recovery lack generality, pertaining to specific species, populations, or locales. Narrowly focused analyses offer a weak empirical basis for...

  11. Historical species losses in bumblebee evolution. (United States)

    Condamine, Fabien L; Hines, Heather M


    Investigating how species coped with past environmental changes informs how modern species might face human-induced global changes, notably via the study of historical extinction, a dominant feature that has shaped current biodiversity patterns. The genus Bombus, which comprises 250 mostly cold-adapted species, is an iconic insect group sensitive to current global changes. Through a combination of habitat loss, pathogens and climate change, bumblebees have experienced major population declines, and several species are threatened with extinction. Using a time-calibrated tree of Bombus, we analyse their diversification dynamics and test hypotheses about the role of extinction during major environmental changes in their evolutionary history. These analyses support a history of fluctuating species dynamics with two periods of historical species loss in bumblebees. Dating estimates gauge that one of these events started after the middle Miocene climatic optimum and one during the early Pliocene. Both periods are coincident with global climate change that may have extirpated Bombus species. Interestingly, bumblebees experienced high diversification rates during the Plio-Pleistocene glaciations. We also found evidence for a major species loss in the past one million years that may be continuing today. © 2015 The Author(s) Published by the Royal Society. All rights reserved.

  12. ( Dialium guineense willd), a multipurpose tree species

    African Journals Online (AJOL)

    The velvet tamarind (Dialium guineense Willd) is one of the key species for domestication in Sub-Saharan Africa. In order to help the sustainable management and conservation of this species, its structural characteristics and ethnobotanical traits were studied in the 4 vegetation types (typical dense forest, degraded dense ...

  13. species composition, relative abundance and distribution

    African Journals Online (AJOL)

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    migratory breeding in the Palaearctic region and. 69 are mainly African (south of the Sahara desert) or tropical species which also occur in the. Palaearctic region. There are 199 Palaearctic winter visitors in Ethiopia, including 21 passage migrants. Of these, 169 are only visitors with no resident forms. There are 47 species, ...

  14. Species of Botryosphaeriaceae occurring on Proteaceae

    NARCIS (Netherlands)

    Marincowitz, S.; Groenewald, J.Z.; Wingfield, M.J.; Crous, P.W.


    The Botryosphaeriaceae includes several species that are serious canker and leaf pathogens of Pro-­ teaceae. In the present study, sequence data for the ITS nrDNA region were used in conjunction with morphological observations to resolve the taxonomy of species of Botryosphaeriaceae associated with

  15. Species diversity of Trichoderma in Poland (United States)

    Fifteen species of Trichoderma were identified from among 118 strains originating from different regions and ecological niches in Poland. This low number indicates low species diversity of Trichoderma in this Central European region. Using the ITS1-ITS2 regions, 64 strains were positively identified...

  16. Languages and Species: Threats and Global Patterns


    Sutherland, William


    Both languages and species are threatened with extinction. This talk will compare patterns of cultural and biological diversity. The aims will be to compare the extinction risk of languages with other groups and then compare the patterns of the global distribution of languages and species. The factors influencing diversity and threat will be considered.

  17. The Drosophila bipectinata species complex: phylogenetic ...

    Indian Academy of Sciences (India)

    Making interspecific hybridizations, where possible remains an unparalleled option for studying the intricacies of speciation. In the Drosophila bipectinata species complex comprising of four species, namely D. bipectinata, D. parabipectinata, D. malerkotliana and D. pseudoananassae, interspecific hybrids can be obtained ...

  18. SERI Aquatic Species Program: 1983 Annual Report

    Energy Technology Data Exchange (ETDEWEB)


    During 1983 research was carried out under three tasks: biological, engineering, and analysis. Biological research was aimed at screening for promising species of microalgae, macroalgae, and emergent plants that could be cultivated for energy products. Promising species were studied further to improve yields.

  19. Some new or noteworthy species of Mortierella

    NARCIS (Netherlands)

    Gams, W.


    Twenty-two species of Mortierella are described and distributed over the sections defined by Gams (1970) which include the following new species: Section Pusilla: M. roseo-nana; Section Alpina: M. globalpina and M. polygonia Section Simplex: M. amoeboidea; Section Hygrophila : M. elongatula, M.

  20. Antibiotic susceptibilities of Salmonella species prevalent among ...

    African Journals Online (AJOL)

    This study was conducted to assess the prevalence of Salmonella species among children having diarrhea in Katsina State, Nigeria. A total of 220 diarrhea stool samples of children aged five years and below (0-5 years) were collected and screened for Salmonella species using culture technique. Presumptively positive ...

  1. Invasive species overarching priorities to 2029 (United States)

    Kelly Burnett; Susan J. Frankel; Melody Keena; Mee-Sook Kim; Ned B. Klopfenstein; Michael E. Ostry; Carolyn Hull Sieg


    Invasive species are one of the greatest threats to forest, range, aquatic, and urban forest ecosystem health. They contribute to the endangerment of native species and may lead to other severe ecological and financial consequences in our Nation’s wildlands and urban forests. Costs the public pays for damage, losses, and control efforts are estimated at more than $138...

  2. Luminescent Mycena: new and noteworthy species (United States)

    Dennis E. Desjardin; D. Jean Lodge; Cassius V. Stevani; Eiji. Nagasawa


    Seven species of Mycena are reported as luminescent, representing specimens collected in Belize, Brazil, Dominican Republic, Jamaica, Japan (Bonin Islands), Malaysia (Borneo) and Puerto Rico. Four of them represent new species (Mycena luxaeterna, M. luxarboricola, M. luxperpetua, M. silvaelucens) and three represent new reports of...

  3. Taxonomy of Penicillium citrinum and related species

    NARCIS (Netherlands)

    Houbraken, J.; Frisvad, J.C.; Samson, R.A.


    Penicillium citrinum and related species have been examined using a combination of partial beta-tubulin, calmodulin and ITS sequence data, extrolite patterns and phenotypic characters. It is concluded that seven species belong to the series Citrina. Penicillium sizovae and Penicillium steckii are

  4. Taking species abundance distributions beyond individuals

    NARCIS (Netherlands)

    Morlon, Helene; White, Ethan P.; Etienne, Rampal S.; Green, Jessica L.; Ostling, Annette; Alonso, David; Enquist, Brian J.; He, Fangliang; Hurlbert, Allen; Magurran, Anne E.; Maurer, Brian A.; McGill, Brian J.; Olff, Han; Storch, David; Zillio, Tommaso; Chave, Jérôme

    The species abundance distribution (SAD) is one of the few universal patterns in ecology. Research on this fundamental distribution has primarily focused on the study of numerical counts, irrespective of the traits of individuals. Here we show that considering a set of Generalized Species Abundance

  5. The South African Species of Myrica

    Directory of Open Access Journals (Sweden)

    D. J. B. Killick


    Full Text Available The South African species of Myrica are revised, the 19 species previously recognized being reduced to 9. One variety is elevated to specific rank, viz. M. conifera Burm.f. var.  Integra A. Chev. becomes M. Integra (A. Chev. Killick.

  6. Xanthomendoza borealis - a bipolar lichen species

    DEFF Research Database (Denmark)

    LIndblom, Louise; Søchting, Ulrik

    It has been uncertain whether the two xanthorioid taxa known as Xanthoria mawsonii and Xanthomen-doza borealis truly are distinct species or if they should best be treated as one species. They are morphologically very similar, but inhabit two disjunct geographical areas, that is, circumpolar on t...

  7. 7 Edible Amphibian Species.cdr

    African Journals Online (AJOL)


    Introduction. Amphibians are one of the most threatened groups of vertebrates, with at least one third of over 6,000 known species being threatened with extinction (Stuart et al.,. 2004, 2008). Many reasons are attributed to the decline of amphibian species such as global warming, habitat destruction and modification ...

  8. The species of Alangium section Rhytidandra (Alangiaceae)

    NARCIS (Netherlands)

    Wilde, de W.J.J.O.; Duyfjes, B.E.E.


    Alangium sect. Rhytidandra is confined to SE Asia, the Pacific and East Australia, and contains 13 species. Five species, viz. Alangium brassii, A. glabrum, A. gracile, A. guadalcanalense, and A. velutinum are described as new, whereas A. villosum subsp. solomonense is raised to specific rank: A.

  9. Trichosporon species isolated from human respiratory system


    Maria Dynowska


    The research included clinical material collected from the patients of the Specialist Medical Unit for Tubereles. Lung Diseases and Oncology in Olsztyn with particular consideration to the respiratory system and to Trichosporon species. In total 3 species were isolated: Trichosporon beigelii Vuillemin, Trichosporon capitatum Diddens et Lodder and Trichosporon pullulans Diddens et Lodder. T. beigelii dominated in the materiał examined.

  10. Species Assortment and Biodiversity Conservation in Homegardens ...

    African Journals Online (AJOL)


    that the urban gardens are a storehouse of biodiversity including species that run the risk of disappearance in the natural habitat. ... Species assortment and biodiversity conservation in homegardens of Bahir Dar. [33] consumption, and significantly ... Nile River and the Mediterranean Sea. The topography of the City is ...

  11. 76 FR 30955 - Invasive Species Advisory Committee (United States)


    ... Advisory Committee (ISAC). Comprised of 30 nonfederal invasive species experts and stakeholders from across... development, introduction pathways, and new invaders. ISAC will also consult with Western-based scientists and... Invasive Species Council Program Analyst and ISAC Coordinator, (202) 513-7243; Fax: (202) 371-1751, Dated...

  12. Phylogenetic relationships between Synodontis species: some ...

    African Journals Online (AJOL)

    Unique alleles were found at EST(B) in S. zambezensis and LGG(B) in S. nigromaculatus, whereas the outgroup species Parauchenoglanis ngamensis had private alleles at SDH(A), MPI(C) and LGG(A). The species boundaries were tested using controlled breeding studies between S. nigromaculatus and S. zambezensis.

  13. Two New American Species of Hordeum (Poaceae)

    DEFF Research Database (Denmark)

    Bothmer, Roland Von; Jacobsen, Niels; Bagger Jørgensen, Rikke


    Two new species of Hordeum are described, viz. the diploid H. erectifolium, native to Argentina, and H. guatemalense, native to Guatemala.......Two new species of Hordeum are described, viz. the diploid H. erectifolium, native to Argentina, and H. guatemalense, native to Guatemala....

  14. Ethnopharmacological and Phytochemical Review of Allium Species ...

    African Journals Online (AJOL)

    Tulbaghia (wild Garlic) is a plant genus most closely related to the genus Allium both in the family Alliaceae and is entirely indigenous to Southern Africa. Indigenous people use several species of the genus as food and medicine, and few species are commonly grown as ornamentals. Biological and pharmacological ...

  15. Cytotoxic constituents of Alectra and Striga species

    DEFF Research Database (Denmark)

    Rank, Christian; Rasmussen, Lars S.; Jensen, Søren Rosendal


    Decimation of cereal growth and yields by hemiparasitic Striga species cannot be accounted for entirely by the removal of host-plant resources. The production of toxic compounds by the parasite has been suggested. An investigation of three species of the economically important Striga and the rela...

  16. Invasive plant species in hardwood tree plantations (United States)

    Rochelle R. Beasley; Paula M. Pijut


    Invasive plants are species that can grow and spread aggressively, mature quickly, and invade an ecosystem causing economic and environmental damage. Invasive plants usually invade disturbed areas, but can also colonize small areas quickly, and may spread and dominate large areas in a few short years. Invasive plant species displace native or desirable forest...

  17. The Drosophila bipectinata species complex: phylogenetic ...

    Indian Academy of Sciences (India)

    Kota Kinabalu (Malaysia). –. (c) Details of the laboratory stocks of D. malerkotliana ..... Bock I. R. 1971a Taxonomy of the Drosophila bipectinata species complex. Univ. Tex. Publ. 6, 273–280. Bock I. R. 1971b Intra and interspecific chromosomal inversions in the Drosophila bipectinata species complex. Chromosoma 34,.

  18. The Invasive Plant Species Education Guide (United States)

    Mason, Kevin; James, Krista; Carlson, Kitrina; D'Angelo, Jean


    To help high school students gain a solid understanding of invasive plant species, university faculty and students from the University of Wisconsin-Stout (UW-Stout) and a local high school teacher worked together to develop the Invasive Plant Species (IPS) Education Guide. The IPS Education Guide includes nine lessons that give students an…

  19. Great Basin rare and vulnerable species (United States)

    Erica Fleishman


    Many native species of plants and animals in the Great Basin have a restricted geographic distribution that reflects the region’s biogeographic history. Conservation of these species has become increasingly challenging in the face of changing environmental conditions and land management practices. This paper provides an overview of major stressors contributing to...

  20. Elucidating the Ramularia eucalypti species complex

    NARCIS (Netherlands)

    Videira, S.I.R.; Groenewald, J.Z.; Kolecka, A.; Haren, van L.; Boekhout, T.; Crous, P.W.


    The genus Ramularia includes numerous phytopathogenic species, several of which are economically important. Ramularia eucalypti is currently the only species of this genus known to infect Eucalyptus by causing severe leaf-spotting symptoms on this host. However, several isolates identified as R.

  1. New species of Maerua (Capparaceae) from Angola

    NARCIS (Netherlands)

    Abreu, J.A.; Martins, E.S.; Catarino, L.


    Genus Maerua has around 60 species represented on the African continent, of which three have been reported for Angola. Two new species of Maerua (Capparaceae) from Angola are here described. Both are closely similar to M. juncea subsp. juncea, being distinguished by floral traits such as the

  2. In vitro propagation of Fraxinus species (United States)

    J.W. Van Sambeek; J.E. Preece


    The genus Fraxinus, a member of the Oleaceae family, includes over 65 ash species native to the temperate regions of the northern hemisphere (Miller, 1955). Several of the ash species are important forest trees noted for their tough, highly resistant to shock, straight grained wood as well as being excellent shade trees for parks and residential...

  3. New species of haematozoa in Phalacrocoracidae and ...

    African Journals Online (AJOL)

    New species of haematozoa, namely Leucocytozoon ugwidi sp. nov. from the Cape Cormorant Phalacrocorax capensis and Haemoproteus skuae sp. nov. from the Subantarctic Skua Catharacta antarctica, are described. These are the first species to be recorded from the families Phalacrocoracidae and Stercorariidae, ...

  4. Alkaloids of some Asian Sedum species

    NARCIS (Netherlands)

    Kim, JH; THart, H; Stevens, JF

    The leafy parts of 16 Asian species belonging to the three sections of Sedum were investigated for the presence of alkaloids. Only in seven species of Sedum sect. Sedum were alkaloids found. Sedum bulbiferum, S. japonicum, S. lepidopodium, S. morrisomensis, S. oryzifolium, S. polytrichoides and S.

  5. (AFLP) studies on Indian Cycas species

    African Journals Online (AJOL)



    Jul 11, 2011 ... dominated the Mesozoic forest along with the other gymnosperms. The Family Cycadaceae consists of single genus Cycas and about 110 species. These plants are distributed in the tropical and .... reconstruction of the phylogeny of closely related species as well as in the studies of population genetics.

  6. Molecular characterization of thermophilic Campylobacter species ...

    African Journals Online (AJOL)

    We identified two species of thermophilic Campylobacter in companion dogs in Jos. Majority of C. jejuni were isolated from mucoid faeces while mixed infections of the two species were more common among diarrhoeic dogs. Pet owners should observe strict hand hygiene especially after handling dogs or their faeces to ...

  7. Endangered Species: Real Life in Two Dimensions (United States)

    Henderson, Lynette K.


    The focus of "Endangered Species: Real Life in Two Dimensions" is to create awareness about a critical environmental issue. There is a special urgency to this project because large numbers of animal species are currently endangered or on the brink of extinction. In addition to being enlightened about this important topic through research, students…

  8. Rapid molecular technique to distinguish Fusarium species

    CSIR Research Space (South Africa)

    Lodolo, EJ


    Full Text Available The nuclear DNA (nDNA) of different isolates of three closely related, toxin-producing Fusarium species, F. moniliforme, F. nygamai and F. napiforme, was compared to ascertain the sensitivity of a molecular method to distinguish these three species...

  9. Species identification and antifungal susceptibility pattern of ...

    African Journals Online (AJOL)

    Vulvovaginal candidiasis (VVC) remains one of the most common infections of the female genital tract. Correct identification of the isolated Candida species is essential to direct the empirical antifungal therapy. Objectives: This local study was conducted to identify the spectrum of Candida species associated with VVC using ...

  10. Grimmia nevadense, a new species from California

    NARCIS (Netherlands)

    Greven, H.C.


    In November 1999. during a field trip along the eastern slopes of the Californian Sierra Nevada, at five different localities a Grimmia species was found that, with some doubt, was identified as Grimmia mariniana Sayre. Recent comparison with fresh material of this species, and with the type

  11. Highlighting Astyanax Species Diversity through DNA Barcoding (United States)

    Oliveira, Carlos Alexandre Miranda; de Melo, Filipe Augusto Gonçalves; Bertaco, Vinicius de Araújo; de Astarloa, Juan M. Díaz; Rosso, Juan J.; Foresti, Fausto; Oliveira, Claudio


    DNA barcoding has been used extensively to solve taxonomic questions and identify new species. Neotropical fishes are found in a wide variety of shapes and sizes, with a large number of species yet to be described, many of which are very difficult to identify. Characidae is the most species-rich family of the Characiformes, and many of its genera are affected by taxonomic uncertainties, including the widely-distributed, species-rich genus Astyanax. In this study, we present an extensive analysis of Astyanax covering almost its entire area of occurrence, based on DNA barcoding. The use of different approaches (ABGD, GMYC and BIN) to the clustering of the sequences revealed ample consistency in the results obtained by the initial cutoff value of 2% divergence for putative species in the Neighbor-Joining analysis using the Kimura-2-parameter model. The results indicate the existence of five Astyanax lineages. Some groups, such as that composed by the trans-Andean forms, are mostly composed of well-defined species, and in others a number of nominal species are clustered together, hampering the delimitation of species, which in many cases proved impossible. The results confirm the extreme complexity of the systematics of the genus Astyanax and show that DNA barcoding can be an useful tool to address these complexes questions. PMID:27992537

  12. species composition, relative abundance and distribution

    African Journals Online (AJOL)

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    habitat size (Willis, 1979), foraging modes. (Marone, 1991) and floristic composition (Wiens and Rotenberry, 1981) have influence in the distribution of the species. The highest number of avian species was observed in the forest habitat. This is probably due to the diversity of vegetation that provided heterogeneous habitat ...

  13. Grain Unloading Of Arsenic Species In Rice (United States)

    Rice (Oryza sativa) is the staple food for over half the world's population yet may represent a significant dietary source of inorganic arsenic (As), a nonthreshold, class 1 human carcinogen. Rice grain As is dominated by the inorganic species, and the organic species dim...

  14. Finessing atlas data for species distribution models

    NARCIS (Netherlands)

    Niamir, A.; Skidmore, A.K.; Toxopeus, A.G.; Munoz, A.R.; Real, R.


    Aim The spatial resolution of species atlases and therefore resulting model predictions are often too coarse for local applications. Collecting distribution data at a finer resolution for large numbers of species requires a comprehensive sampling effort, making it impractical and expensive. This

  15. Metabolite production by differnt Ulocladium species

    DEFF Research Database (Denmark)

    Andersen, Birgitte; Hollensted, Morten


    Ulocladium, which is phylogenetically related to Alternaria, contains species that are food spoilers and plant pathogens, but also species that have potential as enzyme producers and bio-control agents. Ulocladium spp. are often found on dead vegetation, in soil, air and dust, but also on food...

  16. Species Assortment and Biodiversity Conservation in Homegardens ...

    African Journals Online (AJOL)


    that the urban gardens are a storehouse of biodiversity including species that run the risk of disappearance in the ... Consequently, enhancement of biodiversity in urban homegardens is very crucial which its composition ..... Several factors such as agro-ecological conditions and socio-cultural factors can play role in species ...

  17. Multivariate analisys of species from Cucurbitaceae family

    Directory of Open Access Journals (Sweden)

    Mladenović Emina


    Full Text Available Species from Cucurbitaceae family are not widely present in Serbia, although because of their morphological and decorative features deserve more attention. The aim of this paper was to study the morphological variability and usage of ten species of the Cucurbiataceae family. Based on genetic variability, species were grouped into 8 clusters. Fruit characteristics of most investigated species showed great similarity and the greatest differences were attained for flower and fruit characteristics. The longest was the fruit of Trichosanthes cucumerina (46.2 cm, while the shortest of Cucumis myriocarpus (3.4 cm which had the smallest circumference as well (4.4 cm. The largest circumference of fruit was recorded for the species Cucumis aculeatus (16.4 cm. In terms of fruit color Momordica balsamina had a red fruit, allocated from other species whose fruits were in various shades of green. Variability is reflected in large variations in size, shape and color of fruit. Considerating that usages of these species are multiple (food for humans and animals, ornamental studyed species deserve special attention in their further propagation and use.

  18. Invasive Species Science Update (No. 1) (United States)

    Mee-Sook Kim; Jack Butler


    This electronic newsletter (Invasive Species Science Update) is published by the Rocky Mountain Research Station (RMRS) Cross-Program, Interdisciplinary Project team on Invasive Species. This newsletter will be published 3 times per year and is intended to enhance communication among RMRS scientists, wildland managers, other partners, stakeholders, and customers about...

  19. Aspergillus species intrinsically resistant to antifungal agents

    NARCIS (Netherlands)

    Linden, J.W. van der; Warris, A.; Verweij, P.E.


    Polyphasic taxonomy has had a major impact on the species concept of the genus Aspergillus. New sibling species have been described that exhibit in vitro susceptibility profiles that differ significantly from that of Aspergillus fumigatus. While acquired resistance is an emerging problem in A.

  20. Distribution of crayfish species in Hungarian waters

    NARCIS (Netherlands)

    Mercédesz, Ludányi; Peeters, E.T.H.M.; Kiss, B.; Roessink, I.


    Three native crayfish species, i.e.~Astacus astacus, Astacus leptodactylus and Austropotamobius torrentium, occur in Hungary. Lately, however, non-indigenous crustaceans have also invaded the country Their most recent distribution and impact on the occurrences of the native species is not clear.

  1. Invasive Species Science Update (No. 6) (United States)

    Paula Fornwalt


    The sixth issue of the Rocky Mountain Research Station's (RMRS) Invasive Species Science Update is now complete. Published approximately once per year, this newsletter keeps managers and other users up-to-date with recently completed and ongoing research by RMRS scientists, and covers breaking news related to invasive species issues. The newsletter is produced by...

  2. Hybridisation between native Oreochromis species and introduced ...

    African Journals Online (AJOL)

    Hybridisation between native Oreochromis species and introduced Nile tilapia O. niloticus in the Kafue River, Zambia. ... Keywords: aquaculture, ecosystem tradeoffs, fisheries management, introgression, invasive species, microsatellites, Old World cichlids. African Journal of Aquatic Science 2014, 39(1): 23–34.

  3. Invasive species and climate change (Chapter 7) (United States)

    Justin B. Runyon; Jack L. Butler; Megan M. Friggens; Susan E. Meyer; Sharlene E. Sing


    Invasive species present one of the greatest threats to the health and sustainability of ecosystems worldwide. Invasive plants, animals, and diseases are known to have significant negative effects on biological diversity and the ecological structure and functions of native ecosystems. Moreover, the economic cost imposed by invasive species is enormous—the damage...

  4. Toward reassessing data-deficient species. (United States)

    Bland, Lucie M; Bielby, Jon; Kearney, Stephen; Orme, C David L; Watson, James E M; Collen, Ben


    One in 6 species (13,465 species) on the International Union for Conservation of Nature (IUCN) Red List is classified as data deficient due to lack of information on their taxonomy, population status, or impact of threats. Despite the chance that many are at high risk of extinction, data-deficient species are typically excluded from global and local conservation priorities, as well as funding schemes. The number of data-deficient species will greatly increase as the IUCN Red List becomes more inclusive of poorly known and speciose groups. A strategic approach is urgently needed to enhance the conservation value of data-deficient assessments. To develop this, we reviewed 2879 data-deficient assessments in 6 animal groups and identified 8 main justifications for assigning data-deficient status (type series, few records, old records, uncertain provenance, uncertain population status or distribution, uncertain threats, taxonomic uncertainty, and new species). Assigning a consistent set of justification tags (i.e., consistent assignment to assessment justifications) to species classified as data deficient is a simple way to achieve more strategic assessments. Such tags would clarify the causes of data deficiency; facilitate the prediction of extinction risk; facilitate comparisons of data deficiency among taxonomic groups; and help prioritize species for reassessment. With renewed efforts, it could be straightforward to prevent thousands of data-deficient species slipping unnoticed toward extinction. © 2016 Society for Conservation Biology.

  5. The Drosophila bipectinata species complex: phylogenetic ...

    Indian Academy of Sciences (India)


    With the view of investigating the degree of divergence between each species pair, we planned to study the polytene chromosomes of the F1 hybrids, as it would mirror the level of compatibility between the genomes of the parental species. Two sets of crosses were made, one involving homozygous strains of all four ...

  6. Species Distribution and Antibiotic Resistance in Coagulase ...

    African Journals Online (AJOL)


    antimicrobial resistance in the community. Methods: The isolates were identified to the species level by conventional methods, and their susceptibility to 20 antibiotics was tested by disk diffusion and to vancomycin by agar dilution. Results: The species distribution was as follows: Staphylococcus epidermidis 45 (30.2 %), S.

  7. Actinomyces Species Isolated from Breast Infections. (United States)

    Bing, A U; Loh, S F; Morris, T; Hughes, H; Dixon, J M; Helgason, K O


    Actinomycosis is a chronic infection caused by Actinomyces species characterized by abscess formation, tissue fibrosis, and draining sinuses. The spectrum of infections caused by Actinomyces species ranges from classical invasive actinomycosis to a less invasive form of superficial skin and soft tissue infection. We present a review detailing all Actinomyces species isolated from breast infections in NHS Lothian between 2005 and 2013, Actinomyces species isolated from breast infections referred to the United Kingdom Anaerobe Reference Unit between 1988 and 2014, and cases describing Actinomyces breast infections published in the medical literature since 1994. Actinomyces species are fastidious organisms which can be difficult to identify and are likely to be underascertained as a cause of breast infections. Due to improved diagnostic methods, they are increasingly associated with chronic, recurrent breast infections and may play a more significant role in these infections than has previously been appreciated. Copyright © 2015, American Society for Microbiology. All Rights Reserved.

  8. Allium species poisoning in dogs and cats

    Directory of Open Access Journals (Sweden)

    BS Salgado


    Full Text Available Dogs and cats are the animals that owners most frequently seek assistance for potential poisonings, and these species are frequently involved with toxicoses due to ingestion of poisonous food. Feeding human foodstuff to pets may prove itself dangerous for their health, similarly to what is observed in Allium species toxicosis. Allium species toxicosis is reported worldwide in several animal species, and the toxic principles present in them causes the transformation of hemoglobin into methemoglobin, consequently resulting in hemolytic anemia with Heinz body formation. The aim of this review is to analyze the clinicopathologic aspects and therapeutic approach of this serious toxicosis of dogs and cats in order to give knowledge to veterinarians about Allium species toxicosis, and subsequently allow them to correctly diagnose this disease when facing it; and to educate pet owners to not feed their animals with Allium-containg food in order to better control this particular life-threatening toxicosis.

  9. Stochastic species abundance models involving special copulas (United States)

    Huillet, Thierry E.


    Copulas offer a very general tool to describe the dependence structure of random variables supported by the hypercube. Inspired by problems of species abundances in Biology, we study three distinct toy models where copulas play a key role. In a first one, a Marshall-Olkin copula arises in a species extinction model with catastrophe. In a second one, a quasi-copula problem arises in a flagged species abundance model. In a third model, we study completely random species abundance models in the hypercube as those, not of product type, with uniform margins and singular. These can be understood from a singular copula supported by an inflated simplex. An exchangeable singular Dirichlet copula is also introduced, together with its induced completely random species abundance vector.


    Alien species (also referred to as exotic, invasive, introduced, or normative species) have been implicated as causal agents in population declines of many amphibian species. Herein, we evaluate the relative contributions of alien species and other factors in adversely affecting ...

  11. Species delimitation methods put into taxonomic practice: two new Madascincus species formerly allocated to historical species names (Squamata, Scincidae

    Directory of Open Access Journals (Sweden)

    Aurélien Miralles


    Full Text Available In a previous study, Miralles and Vences (2013 compared seven different methods of species delimitation applied to the genus Madascincus. While focusing on methodological aspects their study involved an extensive data set of multilocus DNA sequences and of comparative morphology. On this basis they emphasized the need of revising the taxonomy of Madascincus, and revealed the existence of at least two well-supported candidate species. The present paper provides formal descriptions of these two taxa: (1 M. miafina sp. n., a species from dry areas of northern Madagascar, morphologically very similar to M. polleni (although both species are not retrieved as sister taxa, and (2 M. pyrurus sp. n., a montane species occurring >1500 m above sea level, endemic to the central highlands of Madagascar (Ibity and Itremo Massifs. Phylogenetically, M. pyrurus is the sister species of M. igneocaudatus, a taxon restricted to the dry littoral regions of the south and south-west of Madagascar in lowlands <500 m above sea level. To facilitate future taxonomic work, we furthermore elaborated an identification key for species of Madascincus. Finally, some aspects of the biogeographic patterns characterising the different main clades within the genus Madascincus are provided and discussed for the first time in the light of a robust phylogenetic framework.


    ARSENIC SPECIES. CAUSE RELEASE OF IRON , FROM FERRITIN GENERATING REACTIVE OXYGEN SPECIES Arsenic-associated cancer (lung, bladder, skin, liver, kidney) remains a significant world- wide public health problem (e.g., Taiwan, Chile, Bangladesh, India, China and Thailand). R...


    ARSENIC SPECIES CAUSE RELEASE OF IRON FROM FERRITIN GENERATING REACTIVE OXYGEN SPECIES Arsenic-associated cancer (lung, bladder, skin, liver, kidney) remains a significant world- wide public health problem (e.g., Taiwan, Chile, Bangladesh, India, China and Thailand). Rece...

  14. Effects of species' characteristics on nongovernmental organizations' attitudes toward species conservation policy

    NARCIS (Netherlands)

    Knegtering, E; Hendrickx, L.C W P; van der Windt, H.J.; Schoot Uiterkamp, A.J.M.

    The authors examined the willingness of nongovernmental organizations (NGOs) to support public species conservation measures as a function of species characteristics, NGOs' interests, and interests harmed by the measures. In an experiment, 39 policy makers from nature conservation, mobility and

  15. Genetic sorting of subordinate species in grassland modulated by intraspecific variation in dominant species.

    Directory of Open Access Journals (Sweden)

    Danny J Gustafson

    Full Text Available Genetic variation in a single species can have predictable and heritable effects on associated communities and ecosystem processes, however little is known about how genetic variation of a dominant species affects plant community assembly. We characterized the genetic structure of a dominant grass (Sorghastrum nutans and two subordinate species (Chamaecrista fasciculata, Silphium integrifolium, during the third growing season in grassland communities established with genetically distinct (cultivated varieties or local ecotypes seed sources of the dominant grasses. There were genetic differences between subordinate species growing in the cultivar versus local ecotype communities, indicating that intraspecific genetic variation in the dominant grasses affected the genetic composition of subordinate species during community assembly. A positive association between genetic diversity of S. nutans, C. fasciculata, and S. integrifolium and species diversity established the role of an intraspecific biotic filter during community assembly. Our results show that intraspecific variation in dominant species can significantly modulate the genetic composition of subordinate species.

  16. Spectral variability within species and its effects on savanna tree species discrimination

    CSIR Research Space (South Africa)

    Cho, Moses A


    Full Text Available Differences in within-species phenology and structure driven by factors including topography, edaphic properties, and climatic variables present important challenges for species differentiation with remote sensing in the Kruger National Park, South...

  17. 75 FR 38069 - Injurious Wildlife Species; Listing the Boa Constrictor, Four Python Species, and Four Anaconda... (United States)


    ... Constrictor, Four Python Species, and Four Anaconda Species as Injurious Reptiles AGENCY: Fish and Wildlife... regulations to add Indian python (Python molurus, including Burmese python Python molurus bivittatus), reticulated python (Broghammerus reticulatus or Python reticulatus), Northern African python (Python sebae...

  18. 75 FR 11808 - Injurious Wildlife Species; Listing the Boa Constrictor, Four Python Species, and Four Anaconda... (United States)


    ... Constrictor, Four Python Species, and Four Anaconda Species as Injurious Reptiles AGENCY: Fish and Wildlife... to add Indian python (Python molurus, including Burmese python Python molurus bivittatus), reticulated python (Broghammerus reticulatus or Python reticulatus), Northern African python (Python sebae...

  19. A new species of Brevipalpus Donnadieu (Acari: Tenuipalpidae) and key to the Egyptian species. (United States)

    Halawa, Alaa M; Fawzy, Magdy M


    A new species, Brevipalpus noranae sp. nov. (Acari: Tenuipalpidae) is described and illustrated from females collected on Malus domestica Borkh and Citrus aurantium L. A key to the species of the genus Brevipalpus present in Egypt is provided.

  20. New species of Moenkhausia Eigenmann, 1903 (Characiformes: Characidae with comments on the Moenkhausia oligolepis species complex

    Directory of Open Access Journals (Sweden)

    Ricardo C. Benine

    Full Text Available A new species of Moenkhausia is described from tributaries of the rio Paraguay, Brazil. The new species is diagnosed from congeners by characters related to body coloration, the number of lateral line scales, the degree of poring of the lateral line, and number of scales rows above and below the lateral line. Molecular analyses using partial sequences of the mitochondrial gene Cytochrome Oxidase I from specimens of the new species and specimens belonging to morphologically similar species demonstrated that the new species is easily differentiated by their high genetic distance and by their position in the phylogenetic hypothesis obtained through the Maximum Parsimony methodology. The analyses of three samples of M. oligolepis also revealed that they have high genetic distances and belong to different monophyletic groups suggesting that this species corresponds to a species complex rather than a single species.

  1. Chinese species of Pediobius Walker (Hymenoptera: Eulophidae). (United States)

    Cao, Huan-Xi; Salle, John LA; Zhu, Chao-Dong


    The Chinese species of Pediobius Walker, 1846 are treated in this paper, resulting in 34 species, of which 5 are newly described: P. bisulcatus Cao & Zhu sp. n., P. elongatus Cao & Zhu sp. n., P.petiolapilus Cao & Zhu sp. n., P. prominentis Cao & Zhu, sp. n., and P. tortricida Cao & Zhu, sp. n. Nine species are also newly recorded from China: P. anomalus (Gahan, 1920), P. bethylicidus Kerrich, 1973, P. bruchicida (Rondani, 1872), P. cassidae Erdös, 1958, P. claviger (Thomson, 1878), P. erionotae Kerrich, 1973, P. phragmitis Bouček, 1965, P. saulius (Walker, 1839), and P. tetratomus (Thomson, 1878). Four new synonyms are proposed: P. illiberidis Liao, 1987 under P. pyrgo (Walker, 1839) syn. n., P. planiceps Sheng & Kamijo, 1992 under P. inexpectatus Kerrich, 1973 syn. n., P. sinensis Sheng & Wang, 1994 under P. facialis (Giraud, 1863) syn. n., and P. songshaominus Liao, 1987 under P. yunanensis Liao, 1987 syn. n. The species-group concept is used to compare similar species, of which eight are recognized in China including two newly recognized groups: the cassidae-group and the crassicornis-group. One species complex, the P. eubius complex, is also recognized. An updated checklist of the Chinese species of Pediobius is provided, with species-group placement. New host records for Pediobius species from China are summarized in a table and valid species possibly present in China but not included in this study in another table. A key to all known females and males of Chinese Pediobius is also provided.

  2. Neosilba (Tephritoidea: Lonchaeidae) species reared from coffee in Brazil, with description of a new species

    Energy Technology Data Exchange (ETDEWEB)

    Striki, Pedro Carlos; Prado, Angelo Pires do, E-mail: apprado@unicamp.b [Universidade Estadual de Campinas (UNICAMP), SP (Brazil). Inst. de Biologia. Dept. de Parasitologia


    Neosilba species are believed to be secondary invaders of fruit, so, little attention has been paid to its presence in coffee fruits. In this article we present a key to Neosilba species present in coffee fruits and describe a new species that is considered a primary invader. We hope this will help researchers working with coffee fruits to better quantify the economic importance of Neosilba species associated with coffee fruits. (author)

  3. 78 FR 279 - Atlantic Highly Migratory Species; 2006 Consolidated Highly Migratory Species Fishery Management... (United States)


    ... scalloped hammerhead sharks indicated that these species are overfished and experiencing overfishing. As... Species (HMS) Fishery Management Plan (FMP) in response to several shark stock assessments that were... fishing mortality and effort in order to rebuild overfished Atlantic shark species while ensuring that a...

  4. Insecticide species sensitivity distributions: importance of test species selection and relevance to aquatic ecosystems

    NARCIS (Netherlands)

    Maltby, L.; Blake, N.; Brock, T.C.M.; Brink, van den P.J.


    Single-species acute toxicity data and (micro)mesocosm data were collated for 16 insecticides. These data were used to investigate the importance of test-species selection in constructing species sensitivity distributions (SSDs) and the ability of estimated hazardous concentrations (HCs) to protect

  5. Managing aquatic species of conservation concern in the face of climate change and invasive species. (United States)

    Rahel, Frank J; Bierwagen, Britta; Taniguchi, Yoshinori


    The difficult task of managing species of conservation concern is likely to become even more challenging due to the interaction of climate change and invasive species. In addition to direct effects on habitat quality, climate change will foster the expansion of invasive species into new areas and magnify the effects of invasive species already present by altering competitive dominance, increasing predation rates, and enhancing the virulence of diseases. In some cases parapatric species may expand into new habitats and have detrimental effects that are similar to those of invading non-native species. The traditional strategy of isolating imperiled species in reserves may not be adequate if habitat conditions change beyond historic ranges or in ways that favor invasive species. The consequences of climate change will require a more active management paradigm that includes implementing habitat improvements that reduce the effects of climate change and creating migration barriers that prevent an influx of invasive species. Other management actions that should be considered include providing dispersal corridors that allow species to track environmental changes, translocating species to newly suitable habitats where migration is not possible, and developing action plans for the early detection and eradication of new invasive species.

  6. Two new species of Omyomymar Schauff (Hymenoptera: Mymaridae from India with key to Oriental species

    Directory of Open Access Journals (Sweden)

    James Gowriprakash


    Full Text Available Two new species of Omyomymar Schauff viz., O. huberi sp. nov. and O. noyesi sp. nov., are described from Tamil Nadu, India. A key to Oriental Omyomymar species is provided with color images of new species for easy morphological diagnosis.

  7. Variation in species composition and species richness within Phragmites australis dominated riparian zones

    NARCIS (Netherlands)

    Lenssen, J.P.M.; Menting, F.B.J.; Van der Putten, W.H.; Blom, C.W.P.M.


    In riparian wetlands total standing crop often fails to account for a significant part of the observed variation in species richness and species composition within communities. In this study, we used abundance of the dominant species instead of total standing crop as the biotic predictor variable

  8. 76 FR 45781 - Atlantic Highly Migratory Species; Meeting of the Atlantic Highly Migratory Species Advisory Panel (United States)


    ... National Oceanic and Atmospheric Administration RIN 0648-XA573 Atlantic Highly Migratory Species; Meeting of the Atlantic Highly Migratory Species Advisory Panel AGENCY: National Marine Fisheries Service... meeting. SUMMARY: NMFS will hold a 3-day Atlantic Highly Migratory Species (HMS) Advisory Panel (AP...

  9. 76 FR 65700 - Atlantic Highly Migratory Species; Advisory Panel for Atlantic Highly Migratory Species Southeast... (United States)


    ... National Oceanic and Atmospheric Administration RIN 0648-XA776 Atlantic Highly Migratory Species; Advisory Panel for Atlantic Highly Migratory Species Southeast Data, Assessment, and Review Workshops AGENCY... Migratory Species (HMS) Southeast Data, Assessment, and Review (SEDAR) Workshops (this AP is also called the...

  10. Species distribution modelling for plant communities: Stacked single species or multivariate modelling approaches? (United States)

    Emilie B. Henderson; Janet L. Ohmann; Matthew J. Gregory; Heather M. Roberts; Harold S.J. Zald


    Landscape management and conservation planning require maps of vegetation composition and structure over large regions. Species distribution models (SDMs) are often used for individual species, but projects mapping multiple species are rarer. We compare maps of plant community composition assembled by stacking results from many SDMs with multivariate maps constructed...

  11. Random processes and geographic species richness patterns : why so few species in the north?

    NARCIS (Netherlands)

    Bokma, F; Bokma, J; Monkkonen, M

    In response to the suggestion that the latitudinal gradient in species richness is the result of stochastic processes of species distributions, we created a computer simulation program that enabled us to study random species distributions over irregularly shaped areas. Our model could not explain

  12. Recent advances in probabilistic species pool delineations

    Directory of Open Access Journals (Sweden)

    Dirk Nikolaus Karger


    Full Text Available A species pool is the set of species that could potentially colonize and establish within a community. It has been a commonly used concept in biogeography since the early days of MacArthur and Wilson’s work on Island Biogeography. Despite their simple and appealing definition, an operational application of species pools is bundled with a multitude of problems, which have often resulted in arbitrary decisions and workarounds when defining species pools. Two recently published papers address the operational problems of species pool delineations, and show ways of delineating them in a probabilistic fashion. In both papers, species pools were delineated using a process-based, mechanistical approach, which opens the door for a multitude of new applications in biogeography. Such applications include detecting the hidden signature of biotic interactions, disentangling the geographical structure of community assembly processes, and incorporating a temporal extent into species pools. Although similar in their conclusions, both ‘probabilistic approaches’ differ in their implementation and definitions. Here I give a brief overview of the differences and similarities of both approaches, and identify the challenges and advantages in their application.

  13. Species coexistence in a changing world

    Directory of Open Access Journals (Sweden)

    Fernando eValladares


    Full Text Available The consequences of global change for the maintenance of species diversity will depend on the sum of each species responses to the environment and on the interactions among them. A wide ecological literature supports that these species-specific responses can arise from factors related to life strategies, evolutionary history and intraspecific variation, and also from environmental variation in space and time. In the light of recent advances from coexistence theory combined with mechanistic explanations of diversity maintenance, we discuss how global change drivers can influence species coexistence. We revise the importance of both competition and facilitation for understanding coexistence in different ecosystems, address the influence of phylogenetic relatedness, functional traits, phenotypic plasticity and intraspecific variability, and discuss lessons learnt from invasion ecology. While most previous studies have focused their efforts on disentangling the mechanisms that maintain the biological diversity in species-rich ecosystems such as tropical forests, grasslands and coral reefs, we argue that much can be learnt from pauci-specific communities where functional variability within each species, together with demographic and stochastic processes becomes key to understand species interactions and eventually community responses to global change.

  14. DNA barcoding of clinically relevant Cunninghamella species. (United States)

    Yu, Jin; Walther, G; Van Diepeningen, A D; Gerrits Van Den Ende, A H G; Li, Ruo-Yu; Moussa, T A A; Almaghrabi, O A; De Hoog, G S


    Mucormycosis caused, in part, by representatives of the genus Cunninghamella is a severe infection with high mortality in patients with impaired immunity. Several species have been described in the literature as etiologic agents. A DNA barcoding study using ITS rDNA and tef-1α provided concordance of molecular data with conventional characters. The currently accepted Cunninghamella species were well supported in phylogenetic trees of both markers except for C. septata with ITS that clustered in the C. echinulata clade. Sequence variability was distinctly higher for the ITS than for tef-1α. Intraspecific ITS variability of some of the species exceeded that between some closely related species, but the marker remained applicable for species identification. The most variable species for both markers was C. echinulata. Cunninghamella bertholletiae is the main pathogenic species; infections by C. blakesleeana, C. echinulata, and C. elegans are highly exceptional. © The Author 2014. Published by Oxford University Press on behalf of The International Society for Human and Animal Mycology. All rights reserved. For permissions, please e-mail:

  15. Culex Species Mosquitoes and Zika Virus. (United States)

    Huang, Yan-Jang S; Ayers, Victoria B; Lyons, Amy C; Unlu, Isik; Alto, Barry W; Cohnstaedt, Lee W; Higgs, Stephen; Vanlandingham, Dana L


    Recent reports of Zika virus (ZIKV) isolates from Culex species mosquitoes have resulted in concern regarding a lack of knowledge on the number of competent vector species for ZIKV transmission in the new world. Although observations in the field have demonstrated that ZIKV isolation can be made from Culex species mosquitoes, the detection of ZIKV in these mosquitoes is not proof of their involvement in a ZIKV transmission cycle. Detection may be due to recent feeding on a viremic vertebrate, and is not indicative of replication in the mosquito. In this study, susceptibility of recently colonized Culex species mosquitoes was investigated. The results showed a high degree of refractoriness among members of Culex pipiens complex to ZIKV even when exposed to high-titer bloodmeals. Our finding suggests that the likelihood of Culex species mosquitoes serving as secondary vectors for ZIKV is very low, therefore vector control strategies for ZIKV should remain focused on Aedes species mosquitoes. Our demonstration that Culex quinquefasciatus from Vero Beach, FL, is refractory to infection with ZIKV is especially important and timely. Based on our data, we would conclude that the autochthonous cases of Zika in Florida are not due to transmission by C. quinquefasciatus, and so control efforts should focus on other species, logically Aedes aegypti and Aedes albopictus.

  16. Genetic variability in three Amazon parrot species

    Directory of Open Access Journals (Sweden)

    IF. Lopes

    Full Text Available Parrots of the genus Amazona are among the most threatened species of the Order Pscittaciformes. This work describes allozyme polymorphisms in three Amazon parrot species - the Blue-fronted Amazon (Amazona aestiva, the Orange-winged Amazon (Amazona amazonica, and the Festive Amazon (Amazona festiva -, and provides useful data for the evaluation of their genetic variability. We electrophoretically analyzed blood samples from 68 wild-caught individuals, maintained in captivity in three Brazilian zoos. Eight of the ten studied enzyme loci exhibited polymorphism. Glucosephosphate isomerase (Gpi proved to be a diagnostic locus for the identification of these Amazon species. The expected average heterozygosity of the Blue-fronted Amazon (0.060 differed significantly from the expected heterozygosities of the Orange-winged Amazon and the Festive Amazon (0.040 and 0.039, respectively. This result was discussed as a consequence of hybridization between two geographic A. aestiva subspecies, and alternatively as a particular trait of this species. Genetic variability of the Blue-fronted Amazon compared to birds in general is not low on a species-wide level, despite the fact that this parrot is one of the most illegally traded species. Allozyme analysis proved to be an useful tool in monitoring the genetic variation within the genus Amazona and can be applied in the management program of other threatened species of this genus.

  17. Genetic variability in three Amazon parrot species. (United States)

    Lopes, I F; Del Lama, M A; Del Lama, S N


    Parrots of the genus Amazona are among the most threatened species of the Order Pscittaciformes. This work describes allozyme polymorphisms in three Amazon parrot species--the Blue-fronted Amazon (Amazona aestiva), the Orange-winged Amazon (Amazona amazonica), and the Festive Amazon (Amazona festiva) -, and provides useful data for the evaluation of their genetic variability. We electrophoretically analyzed blood samples from 68 wild-caught individuals, maintained in captivity in three Brazilian zoos. Eight of the ten studied enzyme loci exhibited polymorphism. Glucosephosphate isomerase (Gpi) proved to be a diagnostic locus for the identification of these Amazon species. The expected average heterozygosity of the Blue-fronted Amazon (0.060) differed significantly from the expected heterozygosities of the Orange-winged Amazon and the Festive Amazon (0.040 and 0.039, respectively). This result was discussed as a consequence of hybridization between two geographic A. aestiva subspecies, and alternatively as a particular trait of this species. Genetic variability of the Blue-fronted Amazon compared to birds in general is not low on a species-wide level, despite the fact that this parrot is one of the most illegally traded species. Allozyme analysis proved to be an useful tool in monitoring the genetic variation within the genus Amazona and can be applied in the management program of other threatened species of this genus.

  18. Pushing the pace of tree species migration.

    Directory of Open Access Journals (Sweden)

    Eli D Lazarus

    Full Text Available Plants and animals have responded to past climate changes by migrating with habitable environments, sometimes shifting the boundaries of their geographic ranges by tens of kilometers per year or more. Species migrating in response to present climate conditions, however, must contend with landscapes fragmented by anthropogenic disturbance. We consider this problem in the context of wind-dispersed tree species. Mechanisms of long-distance seed dispersal make these species capable of rapid migration rates. Models of species-front migration suggest that even tree species with the capacity for long-distance dispersal will be unable to keep pace with future spatial changes in temperature gradients, exclusive of habitat fragmentation effects. Here we present a numerical model that captures the salient dynamics of migration by long-distance dispersal for a generic tree species. We then use the model to explore the possible effects of assisted colonization within a fragmented landscape under a simulated tree-planting scheme. Our results suggest that an assisted-colonization program could accelerate species-front migration rates enough to match the speed of climate change, but such a program would involve an environmental-sustainability intervention at a massive scale.

  19. Pushing the pace of tree species migration. (United States)

    Lazarus, Eli D; McGill, Brian J


    Plants and animals have responded to past climate changes by migrating with habitable environments, sometimes shifting the boundaries of their geographic ranges by tens of kilometers per year or more. Species migrating in response to present climate conditions, however, must contend with landscapes fragmented by anthropogenic disturbance. We consider this problem in the context of wind-dispersed tree species. Mechanisms of long-distance seed dispersal make these species capable of rapid migration rates. Models of species-front migration suggest that even tree species with the capacity for long-distance dispersal will be unable to keep pace with future spatial changes in temperature gradients, exclusive of habitat fragmentation effects. Here we present a numerical model that captures the salient dynamics of migration by long-distance dispersal for a generic tree species. We then use the model to explore the possible effects of assisted colonization within a fragmented landscape under a simulated tree-planting scheme. Our results suggest that an assisted-colonization program could accelerate species-front migration rates enough to match the speed of climate change, but such a program would involve an environmental-sustainability intervention at a massive scale.

  20. Biological and ecological traits of marine species

    Directory of Open Access Journals (Sweden)

    Mark John Costello


    Full Text Available This paper reviews the utility and availability of biological and ecological traits for marine species so as to prioritise the development of a world database on marine species traits. In addition, the ‘status’ of species for conservation, that is, whether they are introduced or invasive, of fishery or aquaculture interest, harmful, or used as an ecological indicator, were reviewed because these attributes are of particular interest to society. Whereas traits are an enduring characteristic of a species and/or population, a species status may vary geographically and over time. Criteria for selecting traits were that they could be applied to most taxa, were easily available, and their inclusion would result in new research and/or management applications. Numerical traits were favoured over categorical. Habitat was excluded as it can be derived from a selection of these traits. Ten traits were prioritized for inclusion in the most comprehensive open access database on marine species (World Register of Marine Species, namely taxonomic classification, environment, geography, depth, substratum, mobility, skeleton, diet, body size and reproduction. These traits and statuses are being added to the database and new use cases may further subdivide and expand upon them.

  1. Cryptic species as a window into the paradigm shift of the species concept. (United States)

    Fišer, Cene; Robinson, Christopher T; Malard, Florian


    The species concept is the cornerstone of biodiversity science, and any paradigm shift in the delimitation of species affects many research fields. Many biologists now are embracing a new "species" paradigm as separately evolving populations using different delimitation criteria. Individual criteria can emerge during different periods of speciation; some may never evolve. As such, a paradigm shift in the species concept relates to this inherent heterogeneity in the speciation process and species category-which is fundamentally overlooked in biodiversity research. Cryptic species fall within this paradigm shift: they are continuously being reported from diverse animal phyla but are poorly considered in current tests of ecological and evolutionary theory. The aim of this review is to integrate cryptic species in biodiversity science. In the first section, we address that the absence of morphological diversification is an evolutionary phenomenon, a "process" counterpart to the long-studied mechanisms of morphological diversification. In the next section regarding taxonomy, we show that molecular delimitation of cryptic species is heavily biased towards distance-based methods. We also stress the importance of formally naming of cryptic species for better integration into research fields that use species as units of analysis. Finally, we show that incorporating cryptic species leads to novel insights regarding biodiversity patterns and processes, including large-scale biodiversity assessments, geographic variation in species distribution and species coexistence. It is time for incorporating multicriteria species approaches aiming to understand speciation across space and taxa, thus allowing integration into biodiversity conservation while accommodating for species uncertainty. © 2018 John Wiley & Sons Ltd.

  2. Economics of Harmful Invasive Species: A Review

    Directory of Open Access Journals (Sweden)

    George Marbuah


    Full Text Available The purpose of this study is to review theoretical and empirical findings in economics with respect to the challenging question of how to manage invasive species. The review revealed a relatively large body of literature on the assessment of damage costs of invasive species; single species and groups of species at different geographical scales. However, the estimated damage costs show large variation, from less than 1 million USD to costs corresponding to 12% of gross domestic product, depending on the methods employed, geographical scale, and scope with respect to inclusion of different species. Decisions regarding optimal management strategies, when to act in the invasion chain and which policy to choose, have received much less attention in earlier years, but have been subject to increasing research during the last decade. More difficult, but also more relevant policy issues have been raised, which concern the targeting in time and space of strategies under conditions of uncertainty. In particular, the weighting of costs and benefits from early detection and mitigation against the uncertain avoidance of damage with later control, when the precision in targeting species is typically greater is identified as a key challenge. The role of improved monitoring for detecting species and their spread and damage has been emphasized, but questions remain on how to achieve this in practice. This is in contrast to the relatively large body of literature on policies for mitigating dispersal by trade, which is regarded as one of the most important vectors for the spread of invasive species. On the other hand, the literature on how to mitigate established species, by control or adaptation, is much more scant. Studies evaluating causes for success or failure of policies against invasive in practice are in principal non-existing.

  3. Fatty acid composition of forage herb species

    DEFF Research Database (Denmark)

    Warner, D.; Jensen, Søren Krogh; Cone, J.W.


    The use of alternative forage species in grasslands for intensive livestock production is receiving renewed attention. Data on fatty acid composition of herbs are scarce, so four herbs (Plantago lanceolata, Achillea millefolium, Cichorium intybus, Pastinaca sativa) and one grass species (timothy......, Phleum pratense) were sown in a cutting trial. The chemical composition and concentration of fatty acids (FA) of individual species were determined during the growing season. Concentrations of crude protein and FA were generally higher in the herbs than in timothy. C. intybus had the highest nutritive...

  4. Diet alters species recognition in juvenile toads. (United States)

    Pfennig, Karin S; Rodriguez Moncalvo, Verónica G; Burmeister, Sabrina S


    Whether environmental effects during juvenile development can alter the ontogeny of adult mating behaviour remains largely unexplored. We evaluated the effect of diet on the early expression of conspecific recognition in spadefoot toads, Spea bombifrons. We found that juvenile toads display phonotaxis behaviour six weeks post-metamorphosis. However, preference for conspecifics versus heterospecifics emerged later and was diet dependent. Thus, the environment can affect the early development of species recognition in a way that might alter adult behaviour. Evaluating such effects is important for understanding variation in hybridization between species and the nature of species boundaries.

  5. Fort Collins Science Center: Invasive Species Science (United States)

    Stohlgren, Tom


    Invasive, non-native species of plants, animals, and disease organisms adversely affect the ecosystems they enter. Like "biological wildfires," they can quickly spread, and they affect nearly all terrestrial and aquatic ecosystems. Invasive species have become the greatest environmental challenge of the 21st century in terms of economic, environmental, and human health costs, with an estimated impact in the U.S. of over $138 billion per year. Managers of Department of the Interior and other public and private lands and waters rank invasive species as their top resource management problem.

  6. Automatic identification of species with neural networks. (United States)

    Hernández-Serna, Andrés; Jiménez-Segura, Luz Fernanda


    A new automatic identification system using photographic images has been designed to recognize fish, plant, and butterfly species from Europe and South America. The automatic classification system integrates multiple image processing tools to extract the geometry, morphology, and texture of the images. Artificial neural networks (ANNs) were used as the pattern recognition method. We tested a data set that included 740 species and 11,198 individuals. Our results show that the system performed with high accuracy, reaching 91.65% of true positive fish identifications, 92.87% of plants and 93.25% of butterflies. Our results highlight how the neural networks are complementary to species identification.

  7. Automatic identification of species with neural networks

    Directory of Open Access Journals (Sweden)

    Andrés Hernández-Serna


    Full Text Available A new automatic identification system using photographic images has been designed to recognize fish, plant, and butterfly species from Europe and South America. The automatic classification system integrates multiple image processing tools to extract the geometry, morphology, and texture of the images. Artificial neural networks (ANNs were used as the pattern recognition method. We tested a data set that included 740 species and 11,198 individuals. Our results show that the system performed with high accuracy, reaching 91.65% of true positive fish identifications, 92.87% of plants and 93.25% of butterflies. Our results highlight how the neural networks are complementary to species identification.

  8. Reservoirs of Non-baumannii Acinetobacter Species (United States)

    Al Atrouni, Ahmad; Joly-Guillou, Marie-Laure; Hamze, Monzer; Kempf, Marie


    Acinetobacter spp. are ubiquitous gram negative and non-fermenting coccobacilli that have the ability to occupy several ecological niches including environment, animals and human. Among the different species, Acinetobacter baumannii has evolved as global pathogen causing wide range of infection. Since the implementation of molecular techniques, the habitat and the role of non-baumannii Acinetobacter in human infection have been elucidated. In addition, several new species have been described. In the present review, we summarize the recent data about the natural reservoir of non-baumannii Acinetobacter including the novel species that have been described for the first time from environmental sources and reported during the last years. PMID:26870013

  9. Metabolic profiles of three related Salvia species. (United States)

    Yang, Dongfeng; Yang, Shushen; Zhang, Yuejin; Liu, Yonghong; Meng, Xianhai; Liang, Zongsuo


    Salvia miltiorrhiza Bunge is one of the most important and popular plant of the traditional Chinese medicine (TCM), but Salvia castanea Diels f. tomentosa Stib and Salvia miltiorrhiza Bunge f. alb have also been reported to have the same therapeutic effects as S. miltiorrhiza. To better distinguish between these species, the phytochemical profiles of three Salvia species were investigated by liquid chromatography. All the Salvia species were good sources of tanshinones, with the contents of phenolics being high in S. miltiorrhiza and S. miltiorrhiza f. alb, but not in S. castanea Diels f. tomentosa Stib. These results pave the way for a better phytotherapy exploitation of these plants.

  10. Single species victory in a two-site, two-species model of population dispersion (United States)

    Waddell, Jack; Sander, Len; Kessler, David


    We study the behavior of two species, differentiated only by their dispersal rates in an environment providing heterogeneous growth rates. Previous deterministic studies have shown that the slower-dispersal species always drives the faster species to extinction, while stochastic studies show that the opposite case can occur given small enough population and spatial heterogeneity. Other models of similar systems demonstrate the existence of an optimum dispersal rate, suggesting that distinguishing the species as faster or slower is insufficient. We here study the interface of these models for a small spatial system and determine the conditions of stability for a single species outcome.

  11. Dna c-values of 20 invasive alien species and 3 native species in south china

    Directory of Open Access Journals (Sweden)

    Gong Ni


    Full Text Available Cultivated fields and forests in South China are experiencing serious damage due to invasive alien plants. We investigated the relation between DNA C-values and invasiveness. The DNA C-values of 23 species ranged from 0.39 pg to 3.37 pg. Herbs, perennials and native species had higher mean DNA C-values than shrubs, annuals and invasive alien species. DNA C-values decreased with increasing invasiveness. Paederia scandens, a harmful native species, has the lowest DNA C-value among the perennials, indicating that native species with low nuclear content may also possess an invasive potential.

  12. An updated checklist of mosquito species (Diptera: Culicidae) from Madagascar. (United States)

    Tantely, Michaël Luciano; Le Goff, Gilbert; Boyer, Sébastien; Fontenille, Didier


    An updated checklist of 235 mosquito species from Madagascar is presented. The number of species has increased considerably compared to previous checklists, particularly the last published in 2003 (178 species). This annotated checklist provides concise information on endemism, taxonomic position, developmental stages, larval habitats, distribution, behavior, and vector-borne diseases potentially transmitted. The 235 species belong to 14 genera: Aedeomyia (3 species), Aedes (35 species), Anopheles (26 species), Coquillettidia (3 species), Culex (at least 50 species), Eretmapodites (4 species), Ficalbia (2 species), Hodgesia (at least one species), Lutzia (one species), Mansonia (2 species), Mimomyia (22 species), Orthopodomyia (8 species), Toxorhynchites (6 species), and Uranotaenia (73 species). Due to non-deciphered species complexes, several species remain undescribed. The main remarkable characteristic of Malagasy mosquito fauna is the high biodiversity with 138 endemic species (59%). Presence and abundance of species, and their association, in a given location could be a bio-indicator of environmental particularities such as urban, rural, forested, deforested, and mountainous habitats. Finally, taking into account that Malagasy culicidian fauna includes 64 species (27%) with a known medical or veterinary interest in the world, knowledge of their biology and host preference summarized in this paper improves understanding of their involvement in pathogen transmission in Madagascar. © M.L. Tantely et al., published by EDP Sciences, 2016.

  13. An updated checklist of mosquito species (Diptera: Culicidae from Madagascar

    Directory of Open Access Journals (Sweden)

    Tantely Michaël Luciano


    Full Text Available An updated checklist of 235 mosquito species from Madagascar is presented. The number of species has increased considerably compared to previous checklists, particularly the last published in 2003 (178 species. This annotated checklist provides concise information on endemism, taxonomic position, developmental stages, larval habitats, distribution, behavior, and vector-borne diseases potentially transmitted. The 235 species belong to 14 genera: Aedeomyia (3 species, Aedes (35 species, Anopheles (26 species, Coquillettidia (3 species, Culex (at least 50 species, Eretmapodites (4 species, Ficalbia (2 species, Hodgesia (at least one species, Lutzia (one species, Mansonia (2 species, Mimomyia (22 species, Orthopodomyia (8 species, Toxorhynchites (6 species, and Uranotaenia (73 species. Due to non-deciphered species complexes, several species remain undescribed. The main remarkable characteristic of Malagasy mosquito fauna is the high biodiversity with 138 endemic species (59%. Presence and abundance of species, and their association, in a given location could be a bio-indicator of environmental particularities such as urban, rural, forested, deforested, and mountainous habitats. Finally, taking into account that Malagasy culicidian fauna includes 64 species (27% with a known medical or veterinary interest in the world, knowledge of their biology and host preference summarized in this paper improves understanding of their involvement in pathogen transmission in Madagascar.

  14. An updated checklist of mosquito species (Diptera: Culicidae) from Madagascar (United States)

    Tantely, Michaël Luciano; Le Goff, Gilbert; Boyer, Sébastien; Fontenille, Didier


    An updated checklist of 235 mosquito species from Madagascar is presented. The number of species has increased considerably compared to previous checklists, particularly the last published in 2003 (178 species). This annotated checklist provides concise information on endemism, taxonomic position, developmental stages, larval habitats, distribution, behavior, and vector-borne diseases potentially transmitted. The 235 species belong to 14 genera: Aedeomyia (3 species), Aedes (35 species), Anopheles (26 species), Coquillettidia (3 species), Culex (at least 50 species), Eretmapodites (4 species), Ficalbia (2 species), Hodgesia (at least one species), Lutzia (one species), Mansonia (2 species), Mimomyia (22 species), Orthopodomyia (8 species), Toxorhynchites (6 species), and Uranotaenia (73 species). Due to non-deciphered species complexes, several species remain undescribed. The main remarkable characteristic of Malagasy mosquito fauna is the high biodiversity with 138 endemic species (59%). Presence and abundance of species, and their association, in a given location could be a bio-indicator of environmental particularities such as urban, rural, forested, deforested, and mountainous habitats. Finally, taking into account that Malagasy culicidian fauna includes 64 species (27%) with a known medical or veterinary interest in the world, knowledge of their biology and host preference summarized in this paper improves understanding of their involvement in pathogen transmission in Madagascar. PMID:27101839

  15. Two new species of Simulium (Gomphostilbia) (Diptera: Simuliidae) from Myanmar, and their phylogenetic relationships with related species in the S. asakoae species-group. (United States)

    Takaoka, Hiroyuki; Srisuka, Wichai; Low, Van Lun; Maleewong, Wanchai; Saeung, Atiporn


    Two new species of Simulium (Gomphostilbia), S. (G.) myanmarense and S. (G.) monglaense, are described from females, males, pupae and larvae from Myanmar. The two new species are placed in the S. asakoae species-group, and are similar to each other in the female and male but distinguished in the pupa by the presence or absence of an anterodorsal projection of the cocoon, and in the larva by a unique pattern of colored markings on the abdomen. Taxonomic notes are given to separate these species from related species. The COI gene sequences of both species are compared with those of eight species of the S. asakoae species-group and three species of the S. ceylonicum species-group. Both new species are most closely related to each other, further supporting their morphological classification in the S. asakoae species-group. Copyright © 2017 Elsevier B.V. All rights reserved.

  16. Development and Evaluation of Species-Specific PCR for Detection of Nine Acinetobacter Species. (United States)

    Li, Xue Min; Choi, Ji Ae; Choi, In Sun; Kook, Joong Ki; Chang, Young-Hyo; Park, Geon; Jang, Sook Jin; Kang, Seong Ho; Moon, Dae Soo


    Molecular methods have the potential to improve the speed and accuracy of Acinetobacter species identification in clinical settings. The goal of this study is to develop species-specific PCR assays based on differences in the RNA polymerase beta-subunit gene (rpoB) to detect nine commonly isolated Acinetobacter species including Acinetobacter baumannii, Acinetobacter calcoaceticus, Acinetobacter pittii, Acinetobacter nosocomialis, Acinetobacter lwoffii, Acinetobacter ursingii, Acinetobacter bereziniae, Acinetobacter haemolyticus, and Acinetobacter schindleri. The sensitivity and specificity of these nine assays were measured using genomic DNA templates from 55 reference strains and from 474 Acinetobacter clinical isolates. The sensitivity of A. baumannii-specific PCR assay was 98.9%, and the sensitivity of species-specific PCR assays for all other species was 100%. The specificities of A. lwoffii- and A. schindleri-specific PCR were 97.8 and 98.9%, respectively. The specificity of species-specific PCR for all other tested Acinetobacter species was 100%. The lower limit of detection for the nine species-specific PCR assays developed in this study was 20 or 200 pg of genomic DNA from type strains of each species. The Acinetobacter species-specific PCR assay would be useful to determine the correct species among suggested candidate Acinetobacter species when conventional methods including MALDI-TOF MS identify Acinetobacter only to the genus level. The species-specific assay can be used to screen large numbers of clinical and environmental samples obtained for epidemiologic study of Acinetobacter for the presence of target species. © 2016 by the Association of Clinical Scientists, Inc.

  17. Predicting fish species distribution in estuaries: Influence of species' ecology in model accuracy (United States)

    França, Susana; Cabral, Henrique N.


    Current threats to biodiversity, combined with limited data availability, have made for species distribution models (SDMs) to be increasingly used due to their ability to predict species' potential distribution, by relating species occurrence with environmental estimates. Often used in ecology, conservation biology and environmental management, SDMs have been informing conservation strategies, and thus it is becoming crucial to understand how trustworthy their predictions are. Uncertainty in model predictions is expected, but knowing the origin of prediction errors may help reducing it. Indeed, uncertainty may be related not only with data quality and the modelling algorithm used, but also with species ecological characteristics. To investigate whether the performance of SDM's may vary with species' ecological characteristics, distribution models for 21 fish species occurring in estuaries from the Portuguese coast were examined. These models were built at two distinct spatial resolutions and seven environmental explanatory variables were used as predictors. SDMs' accuracy was assessed with the area under the curve (AUC) of receiver operating characteristics (ROC) plots, sensitivity and specificity. Relationships between each measure of accuracy and species ecological characteristics were then examined. SDMs of the fish species presented small differences between the considered scales, and predictors as latitude, temperature and salinity were often selected at both scales. Measures of model accuracy presented differences between species and scales, but generally higher accuracy was obtained at smaller spatial scales. Among the ecological traits tested, species feeding mode and estuarine use functional groups were the most influential on the performance of distribution models. Habitat tolerance (number of habitat types frequented), species abundance, body size and spawning period also showed some effect. This analyses will contribute to distinguish, based on species

  18. Fingerprinting the Asterid species using subtracted diversity array reveals novel species-specific sequences.

    Directory of Open Access Journals (Sweden)

    Nitin Mantri

    Full Text Available BACKGROUND: Asterids is one of the major plant clades comprising of many commercially important medicinal species. One of the major concerns in medicinal plant industry is adulteration/contamination resulting from misidentification of herbal plants. This study reports the construction and validation of a microarray capable of fingerprinting medicinally important species from the Asterids clade. METHODOLOGY/PRINCIPAL FINDINGS: Pooled genomic DNA of 104 non-asterid angiosperm and non-angiosperm species was subtracted from pooled genomic DNA of 67 asterid species. Subsequently, 283 subtracted DNA fragments were used to construct an Asterid-specific array. The validation of Asterid-specific array revealed a high (99.5% subtraction efficiency. Twenty-five Asterid species (mostly medicinal representing 20 families and 9 orders within the clade were hybridized onto the array to reveal its level of species discrimination. All these species could be successfully differentiated using their hybridization patterns. A number of species-specific probes were identified for commercially important species like tea, coffee, dandelion, yarrow, motherwort, Japanese honeysuckle, valerian, wild celery, and yerba mate. Thirty-seven polymorphic probes were characterized by sequencing. A large number of probes were novel species-specific probes whilst some of them were from chloroplast region including genes like atpB, rpoB, and ndh that have extensively been used for fingerprinting and phylogenetic analysis of plants. CONCLUSIONS/SIGNIFICANCE: Subtracted Diversity Array technique is highly efficient in fingerprinting species with little or no genomic information. The Asterid-specific array could fingerprint all 25 species assessed including three species that were not used in constructing the array. This study validates the use of chloroplast genes for bar-coding (fingerprinting plant species. In addition, this method allowed detection of several new loci that can be

  19. Luminescence properties of uranyl-acetate species

    Energy Technology Data Exchange (ETDEWEB)

    Brinkmann, Hannes; Moll, Henry [Helmholtz-Zentrum Dresden-Rossendorf e.V., Dresden (Germany). Inst. of Resource Ecology; Stumpf, Thorsten [Helmholtz-Zentrum Dresden-Rossendorf e.V., Dresden (Germany). Biogeochemistry


    Time-resolved laser-induced fluorescence spectroscopy (TRLFS) was applied to characterize uranium(VI)- acetate species based on their luminescence properties. In contrast to previous interpretations, no indications were detected for the existence of the 1: 3 complex.

  20. antimicrobial susceptibility patterns of salmonella species in ...

    African Journals Online (AJOL)


    Empirical treatment for enteric fevers should, therefore, be discouraged while quinolones, cefepime, carbapenem, azithromycin and third generation cephalosporins be given preference. KEY WORDS: Susceptibility, Antimicrobial, Salmonella species, Enteric fever. INTRODUCTION. In the 21st century, enteric fever in the.