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Sample records for estuary striped bass

  1. Seasonal use of a New England estuary by foraging contingents of migratory striped bass

    Science.gov (United States)

    Mather, Martha E.; Pautzke, Sarah M.; Finn, John T.; Deegan, Linda A.; Muth, Robert M.

    2011-01-01

    Using acoustic telemetry on migratory striped bass Morone saxatilis in Plum Island Estuary (PIE), Massachusetts, we found that striped bass (335–634 mm total length) tagged in the spring and summer of 2005 (n = 14) and 2006 (n = 46) stayed in the estuary for an average of 66.0 d in 2005 and 72.2 d in 2006. Striped bass spent the most time in two specific reaches: middle Plum Island Sound and lower Rowley River. In both years, three different use-groups of striped bass were observed in PIE. Short-term visitors (n = 24) stayed in the estuary only briefly (range = 5–20 d). Two groups of seasonal residents stayed for more than 30 d, either in the Rowley River (n = 14) or in Plum Island Sound (n = 22). Within PIE, the two seasonal-resident use-groups may be foraging contingents that learn how to feed efficiently in specific parts of the estuary. These distinct within-estuary use patterns could have different implications for striped bass condition and prey impact.

  2. Individual-level and Population-level Historical Prey Demand of San Francisco Estuary Striped Bass Using a Bioenergetics Model

    OpenAIRE

    Loboschefsky, Erik; Benigno, Gina; Sommer, Ted; Rose, Kenneth; Ginn, Timothy; Massoudieh, Arash; Loge, Frank

    2012-01-01

    Striped bass are both a major predator of native fishes and support a recreational fishery in the San Francisco Estuary (the estuary). Quantifying their demands on their prey is important for understanding long-term trends of fish in the estuary. In this study, we: (i) applied a bioenergetics model of sub-adult (age 1 and age 2) and adult (age 3+) striped bass (Morone saxatilis) to quantify long-term consumption patterns from 1969 through 2004 in the estuary; (ii) developed a method to estima...

  3. Modeling the effects of potential salinity shifts on the recovery of striped bass in the Savannah River estuary, Georgia-South Carolina, United States

    Science.gov (United States)

    Reinert, T.R.; Peterson, J.T.

    2008-01-01

    Increased salinity in spawning and nursery grounds in the Savannah River estuary was cited as the primary cause of a 97% decrease in adult striped bass (Morone saxatilis) and a concomitant 96% decrease in striped bass egg production. Restoration efforts focused on environmental remediation and stock enhancement have resulted in restored salinity patterns and increased egg and adult abundances. However, future water needs or harbor development may preclude further recovery by reducing freshwater inflow or increasing salinity intrusion. To assess the effect of potential changes in the salinity regime, we developed models relating discharge, tidal phase, and salinity to striped bass egg and early larval survival and re-cast these in a quantitative Bayesian belief network. The model indicated that a small upstream shift (???1.67 km) in the salinity regime would have the least impact on striped bass early life history survival, whereas shifts >1.67 km would have progressively larger impacts, with a 8.33-km shift potentially reducing our estimated survival probability by >28%. Such an impact could have cumulative and long-term detrimental effects on the recovery of the Savannah River striped bass population. The available salinity data were collected during average and low flows, so our model represents some typical and some extreme conditions during a striped bass spawning season. Our model is a relatively simplistic, "first-order" attempt at evaluating potential effects of changes in the Savannah River estuarine salinity regime and points to areas of concern and potential future research. ?? 2008 Springer Science+Business Media, LLC.

  4. Spatial and temporal diet patterns of subadult and small adult striped bass in Massachusetts estuaries: Data, a synthesis, and trends across scales

    Science.gov (United States)

    Ferry, K.H.; Mather, Martha E.

    2012-01-01

    Subadult and small adult (375–475 mm total length) striped bass Morone saxatilis are abundant and represent an important component of the recovered U.S. Atlantic coast stocks. However, little is known about these large aggregations of striped bass during their annual foraging migrations to New England. A quantitative understanding of trends in the diets of subadult and small adult migrants is critical to research and management. Because of the complexity of the Massachusetts coast, we were able to compare diets at multiple spatial, temporal, and taxonomic scales and evaluate which of these provided the greatest insights into the foraging patterns of this size of fish. Specifically, during spring through autumn, we quantified the diets of 797 migratory striped bass collected from 13 Massachusetts estuaries distributed among three geographic regions in two biogeographic provinces. Our data provided three useful results. First, subadult and young adult striped bass ate a season-specific mixture of fish and invertebrates. For example, more juvenile Atlantic herring Clupea harengus were eaten in spring than in summer or autumn, more juvenile Atlantic menhaden Brevoortia tyrannus were eaten in autumn than in spring or summer, amphipods were eaten primarily in the southern biogeographic province, and shrimp Crangon sp. were eaten in all locations and seasons. Second, examining diets by season was essential because of the temporal variability in striped bass prey. Grouping prey by fish and invertebrates revealed the potential for predictable differences in growth across geographic locations and seasons, based on the output from simple bioenergetics simulations. Third, of the three spatial scales examined, region provided the most quantitative and interpretable ecological trends. Our results demonstrate the utility of comparing multiple scales to evaluate the best way to depict diet trends in a migrating predator that seasonally uses different geographic locations.

  5. DNA methylation profiles correlated to striped bass sperm fertility

    Science.gov (United States)

    Striped bass (Morone saxatilis) spermatozoa are used to fertilize in vitro the eggs of white bass (Morone chrysops) to produce the preferred hybrid for the striped bass aquaculture industry. Currently, only one source of domestic striped bass juveniles are available to growers that are not obtained ...

  6. Testing the thermal-niche oxygen-squeeze hypothesis for estuarine striped bass

    Science.gov (United States)

    Kraus, Richard T.; Secor, D.H.; Wingate, Rebecca L.

    2015-01-01

    In many stratified coastal ecosystems, conceptual and bioenergetics models predict seasonal reduction in quality and quantity of fish habitat due to high temperatures and hypoxia. We tested these predictions using acoustic telemetry of 2 to 4 kg striped bass (Morone saxatilis Walbaum) and high-resolution spatial water quality sampling in the Patuxent River, a sub-estuary of the Chesapeake Bay, during 2008 and 2009. Striped bass avoided hypoxic (dissolved oxygen ≤2 mg·l−1) subpycnocline waters, but frequently occupied habitats with high temperatures (>25 °C) in the summer months, as cooler habitats were typically not available. Using traditional concepts of the seasonal thermal-niche oxygen-squeeze, most of the Patuxent estuary would beconsidered unsuitable habitat for adult striped bass during summer. Application of a bioenergetics model revealed that habitats selected by striped bass during summer would support positive growth rates assuming fish could feed at one-half ofmaximum consumption. Occupancy of the estuary during summer by striped bass in this study was likely facilitated by sufficient prey and innate tolerance of high temperatures by sub-adult fish of the size range that we tagged. Our results help extend the thermalniche oxygen-squeeze hypothesis to native populations of striped bass in semi-enclosed coastal systems. Tolerance of for supraoptimal temperatures in our study supports recent suggestions by others that the thermal-niche concept for striped bass should be revised to include warmer temperatures.

  7. Effects of waterborne lipophilic contaminants in striped bass using extracts from semi permeable membrane devices in the San Francisco estuary

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — The decline of pelagic organisms in the San Francisco Estuary (SFE) has been attributed to several factors including water diversions, invasive species and exposure...

  8. Effects of water velocity on activity of juvenile striped bass

    Energy Technology Data Exchange (ETDEWEB)

    Bowles, R.R.; Griffith, J.S.; Coutant, C.C.

    1976-07-01

    The swimming activity of juvenile striped bass (Morone saxatilis Walbaum) 8 to 80 mm long was investigated in a test chamber simulating, on a small scale, a fixed-screen cooling water intake structure. As water velocity increased from 0 to 30 cm/sec area and distance traveled by juvenile bass 10 to 80 mm long decreased. However, as water velocity increased from 0 to 3 cm/sec the area and distance covered by larval bass increased. The presence of food increased the activity of larval bass, but decreased the activity of juveniles. Area ranged by striped bass at test velocities ranging from 0 to 30 cm/sec increased in proportion to body length. Juvenile striped bass tested at acclimation temperatures between 20 and 5/sup 0/C experienced a 30% reduction of activity. Activity was also reduced as temperature increased from 20 to 30/sup 0/C.

  9. Experimental mycobacteriosis in striped bass Morone saxatilis

    Science.gov (United States)

    Gauthier, David T.; Rhodes, M.W.; Vogelbein, W.K.; Kator, H.; Ottinger, C.A.

    2003-01-01

    Striped bass Morone saxatilis were infected intraperitoneally with approximately 105 Mycobacterium marinum, M. shottsii sp. nov., or M. gordonae. Infected fish were maintained in a flow-through freshwater system at 18 to 21??C, and were examined histologically and bacteriologically at 2, 4, 6, 8, 17, 26, 36 and 45 wk post-infection (p.i.). M. marinum caused acute peritonitis, followed by extensive granuloma development in the mesenteries, spleen and anterior kidney. Granulomas in these tissues underwent a temporal progression of distinct morphological stages, culminating in well-circumscribed lesions surrounded by normal or healing tissue. Mycobacteria were cultured in high numbers from splenic tissue at all times p.i. Standard Ziehl-Neelsen staining, however, did not demonstrate acid-fast rods in most early inflammatory foci and granulomas. Large numbers of acid-fast rods were present in granulomas beginning at 8 wk p.i. Between 26 and 45 wk p.i., reactivation of disease was observed in some fish, with disintegration of granulomas, renewed inflammation, and elevated splenic bacterial densities approaching 109 colony-forming units g-1. Infection with M. shottsii or M. gordonae did not produce severe pathology. Mild peritonitis was followed by granuloma formation in the mesenteries, but, with 1 exception, granulomas were not observed in the spleen or anterior kidney. M. shottsii and M. gordonae both established persistent infections in the spleen, but were present at densities at least 2 orders of magnitude less than M. marinum at all time points observed. Granulomas in the mesenteries of M. shottsii- and M. gordonae-infected fish resolved over time, and no reactivation of disease was observed.

  10. Assessing Fishers' Support of Striped Bass Management Strategies

    OpenAIRE

    Murphy, Robert D.; Scyphers, Steven B.; Grabowski, Jonathan H.

    2015-01-01

    Incorporating the perspectives and insights of stakeholders is an essential component of ecosystem-based fisheries management, such that policy strategies should account for the diverse interests of various groups of anglers to enhance their efficacy. Here we assessed fishing stakeholders' perceptions on the management of Atlantic striped bass (Morone saxatilis) and receptiveness to potential future regulations using an online survey of recreational and commercial fishers in Massachusetts and...

  11. Sensitivity of juvenile striped bass to chemicals used in aquaculture

    Science.gov (United States)

    Bills, Terry D.; Marking, Leif L.; Howe, George E.

    1993-01-01

    Efforts to restore anadromous striped bass (Morone saxatilis) populations by the U.S. Fish and Wildlife Service and other agencies over the past 20 years have concentrated on hatchery culture to supplement dwindling natural reproduction. Adult fish captured for artificial spawning are stressed by handling and crowding in rearing ponds and are often exposed to therapeutants, anesthetics, disinfectants, and herbicides used in fish culture. We determined the toxicity of 17 fishery chemicals (chloramine-T, erythromycin, formalin, Hyamine 3500, Roccal, malachite green, sulfamerazine, benzocaine, etomidate, Finquel (MS-222) , metomidate, quinaldine sulfate, chlorine, potassium permanganate, Aquazine, copper sulfate, and Rodeo) to striped bass fry (average weight = 1 g) in reconstituted water (total hardness 40 mg/L) at 12 degree C. The 96-h LC50's (concentration calculated to produce 50% mortality in a population) ranged from 0.129 mg/L for malachite green to 340 mg/L for erythromycin. We also determined the effects of selected levels of water temperature, hardness, and pH on the toxicity of chloramine-T, formalin, malachite green, and Roccal. There were no differences in toxicity for any of the chemicals at any water quality variable tested except for chloramine-T, which was about 25 times more toxic in soft, acid water than in soft, alkaline water. Our data show that the striped bass is as sensitive to fishery chemicals as rainbow trout (Oncorhynchus mykiss), but is generally less resistant than bluegill (Lepomis macrochirus) and channel catfish (Ictalurus punctatus).

  12. Osmoregulatory effects of hypophysectomy and homologous prolactin replacement in hybrid striped bass

    DEFF Research Database (Denmark)

    Jackson, Leslie F; McCormick, Stephen D; Madsen, Steffen S

    2005-01-01

    The effects of ovine prolactin (oPRL) and striped bass prolactin (sbPRL; Morone saxatilis) on plasma osmolality, electrolyte balance, and gill Na+,K+-ATPase activity were investigated in hypophysectomized (Hx), freshwater (FW)-acclimated, hybrid striped bass (M. saxatilis x Morone chrysops...

  13. Assessing Fishers' Support of Striped Bass Management Strategies.

    Directory of Open Access Journals (Sweden)

    Robert D Murphy

    Full Text Available Incorporating the perspectives and insights of stakeholders is an essential component of ecosystem-based fisheries management, such that policy strategies should account for the diverse interests of various groups of anglers to enhance their efficacy. Here we assessed fishing stakeholders' perceptions on the management of Atlantic striped bass (Morone saxatilis and receptiveness to potential future regulations using an online survey of recreational and commercial fishers in Massachusetts and Connecticut (USA. Our results indicate that most fishers harbored adequate to positive perceptions of current striped bass management policies when asked to grade their state's management regime. Yet, subtle differences in perceptions existed between recreational and commercial fishers, as well as across individuals with differing levels of fishing experience, resource dependency, and tournament participation. Recreational fishers in both states were generally supportive or neutral towards potential management actions including slot limits (71% and mandated circle hooks to reduce mortality of released fish (74%, but less supportive of reduced recreational bag limits (51%. Although commercial anglers were typically less supportive of management changes than their recreational counterparts, the majority were still supportive of slot limits (54% and mandated use of circle hooks (56%. Our study suggests that both recreational and commercial fishers are generally supportive of additional management strategies aimed at sustaining healthy striped bass populations and agree on a variety of strategies. However, both stakeholder groups were less supportive of harvest reductions, which is the most direct measure of reducing mortality available to fisheries managers. By revealing factors that influence stakeholders' support or willingness to comply with management strategies, studies such as ours can help managers identify potential stakeholder support for or conflicts

  14. Ultrastructure of Mycobacterium marinum granuloma in striped bass Morone saxatilis

    Science.gov (United States)

    Gauthier, David T.; Vogelbein, W.K.; Ottinger, C.A.

    2004-01-01

    An emerging epizootic of mycobacteriosis currently threatens striped bass Morone saxatilis populations in Chesapeake Bay, USA. Several species of mycobacteria, including Mycobacterium marinum, species resembling M. avium, M. gordonae, M. peregrinum, M. scrofulaceum and M. terrae, and the new species M. shottsii have been isolated from diseased and healthy bass. In this study, we describe the ultrastructure of developing M. marinum granulomas in experimentally infected bass over a period of 45 wk. The primary host response to injected mycobacteria was formation of large macrophage aggregations containing phagocytosed bacilli, M. marinum were always contained within phagosomes. Close association of lysosomes with mycobacterial phagosomes, as well as the presence of electron-opaque material within phagosomes, suggested phagolysosomal fusion. Development of granulomas involved epithelioid transformation of macrophages, followed by appearance of central necrosis. Desmosomes were present between mature epithelioid cells. The necrotic core region of M. marinum granulomas was separated from overlying epithelioid cells by several layers of flattened, electron-opaque spindle-shaped cells. These cells appeared to be formed by compression of epithelioid cells and, aside from a flattened nucleus, did not possess recognizable organelles. Following the development of well-defined, paucibacillary granulomas, secondary disease was observed. Recrudescence was marked by bacterial replication followed by disruption of granuloma architecture, including loss of epithelioid and spindle cell layers. In advanced recrudescent lesions, normal tissue was replaced by macrophages, fibroblasts, and other inflammatory leukocytes. Large numbers of mycobacteria were observed, both intracellular and suspended in cellular debris.

  15. Contaminants in striped bass from the flint and Apalachicola Rivers 1986-1989

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — Five striped bass (Morone saxitilis), collected between April 1986 and May 1989 from the Flint River at Albany, Georgia, and the Apalachicola River at Chattahoochee,...

  16. The effects of bupropion on hybrid striped bass brain chemistry and predatory behavior.

    Science.gov (United States)

    Sweet, Lauren E; Bisesi, Joseph H; Lei, E N Y; Lam, Michael H W; Klaine, Stephen J

    2016-08-01

    Increased use of antidepressants has led to an increase in their detection in final treated wastewater effluents and receiving streams. Antidepressants are intended to modify human behavior by altering brain chemistry, and because of the high functional conservation of antidepressant target receptors in vertebrates, aquatic organisms may be at risk. The antidepressant bupropion is designed to alter brain norepinephrine and dopamine concentrations in humans. The objective of the present study was to understand if alteration of dopaminergic neurotransmitter concentrations in the hybrid striped bass (Morone saxatilis × Morone chrysops) brain by bupropion would alter this predator's ability to capture prey. The authors exposed hybrid striped bass to bupropion in a static system for 6 d, followed by a 6-d recovery period. During the present study's 12-d experiment, each hybrid striped bass was fed 4 unexposed fathead minnows every 3 d, and the time it took the hybrid striped bass to consume each of those 4 fathead minnows was quantified. After each feeding event, hybrid striped bass brains were harvested and analyzed for changes in several brain neurotransmitter concentrations, including serotonin, norepinephrine, dopamine, and many of their metabolites. Although bupropion altered the concentration of dopamine and many of the dopaminergic neurotransmitter metabolite concentrations in the brains on day 3 of the exposure, it did not alter the time to capture prey. This suggests that alteration of dopaminergic neurotransmitter concentrations in the hybrid striped bass brain does not alter a predator's ability to capture prey. Environ Toxicol Chem 2016;35:2058-2065. © 2016 SETAC. © 2016 SETAC.

  17. Measurement Error Affects Risk Estimates for Recruitment to the Hudson River Stock of Striped Bass

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    Dennis J. Dunning

    2002-01-01

    Full Text Available We examined the consequences of ignoring the distinction between measurement error and natural variability in an assessment of risk to the Hudson River stock of striped bass posed by entrainment at the Bowline Point, Indian Point, and Roseton power plants. Risk was defined as the probability that recruitment of age-1+ striped bass would decline by 80% or more, relative to the equilibrium value, at least once during the time periods examined (1, 5, 10, and 15 years. Measurement error, estimated using two abundance indices from independent beach seine surveys conducted on the Hudson River, accounted for 50% of the variability in one index and 56% of the variability in the other. If a measurement error of 50% was ignored and all of the variability in abundance was attributed to natural causes, the risk that recruitment of age-1+ striped bass would decline by 80% or more after 15 years was 0.308 at the current level of entrainment mortality (11%. However, the risk decreased almost tenfold (0.032 if a measurement error of 50% was considered. The change in risk attributable to decreasing the entrainment mortality rate from 11 to 0% was very small (0.009 and similar in magnitude to the change in risk associated with an action proposed in Amendment #5 to the Interstate Fishery Management Plan for Atlantic striped bass (0.006— an increase in the instantaneous fishing mortality rate from 0.33 to 0.4. The proposed increase in fishing mortality was not considered an adverse environmental impact, which suggests that potentially costly efforts to reduce entrainment mortality on the Hudson River stock of striped bass are not warranted.

  18. Estimating abundance of adult striped bass in reservoirs using mobile hydroacoustics

    Science.gov (United States)

    Hightower, Joseph E.; Taylor, J. Christopher; Degan, Donald J.

    2013-01-01

    Hydroacoustic surveys have proven valuable for estimating reservoir forage fish abundance but are more challenging for adult predators such as striped bass Morone saxatilis. Difficulties in assessing striped bass in reservoirs include their low density and the inability to distinguish species with hydroacoustic data alone. Despite these difficulties, mobile hydroacoustic surveys have potential to provide useful data for management because of the large sample volume compared to traditional methods such as gill netting and the ability to target specific areas where striped bass are aggregated. Hydroacoustic estimates of reservoir striped bass have been made using mobile surveys, with data analysis using a threshold for target strength in order to focus on striped bass-sized targets, and auxiliary sampling with nets to obtain species composition. We provide recommendations regarding survey design, based in part on simulations that provide insight on the level of effort that would be required to achieve reasonable estimates of abundance. Future surveys may be able to incorporate telemetry or other sonar techniques such as side-scan or multibeam in order to focus survey efforts on productive habitats (within lake and vertically). However, species apportionment will likely remain the main source of error, and we see no hydroacoustic system on the horizon that will identify fish by species at the spatial and temporal scale required for most reservoir surveys. In situations where species composition can be reliably assessed using traditional gears, abundance estimates from hydroacoustic methods should be useful to fishery managers interested in developing harvest regulations, assessing survival of stocked juveniles, identifying seasonal aggregations, and examining predator–prey balance.

  19. Diel behavior of adult striped bass using tailwater habitat as summer refuge

    Science.gov (United States)

    Young, S.P.; Isely, J.J.

    2007-01-01

    General patterns of summer diel distribution and movement were identified for adult striped bass Morone saxatilis using tailwater habitat influenced by the diel operation cycle of a hydroelectric dam during the summers of 2003 and 2004. Striped bass distribution within the tailwater was similar during each diel-tracking event and across both summers. The majority of fish remained within the tailwater the entire summer; however, some made periodic excursions to and from the tailwater throughout the summer. Further, most striped bass were located within 0.5 km of Richard B. Russell Dam during all stages of operation on all occasions - probably because of the constant availability of optimal habitat during all three stages of operation on all diel-tracking events. The diel cycle of dam operation, which included pumped storage during each summer, did not degrade tailwater habitat below optimal conditions, according to summer habitat suitability index values for inland adult striped bass. Movement was significantly higher during hydroelectric generation operations than during no-generation and pumped storage periods in summer 2003; this difference was not apparent during summer 2004. Mean absolute movement peaked during hydroelectric generation on six of eight diel-tracking events. During both summers, movement was directed up-reservoir during no-generation and generation periods and down-reservoir during pumped storage. Mean total daily movement rates ranged from 0.59 to 4.04 km/d and were greater than those previously estimated from bimonthly sampling for this population. Total daily movement rate peaked during the first tracking event each summer and then declined as summer progressed. These findings suggest that hydroelectric discharges affect adult striped bass behavior, but the effects are not adverse as long as habitat is not degraded by hydroelectric facility operations. ?? Copyright by the American Fisheries Society 2007.

  20. Impact of entrainment and impingement on fish populations in the Hudson River Estuary. Volume II. Impingement impact analyses, evaluations of alternative screening devices, and critiques of utility testimony relating to density-dependent growth, the age-composition of the striped bass spawning stock, and the LMS real-time life cycle model

    Energy Technology Data Exchange (ETDEWEB)

    Barnthouse, L. W.; Van Winkle, W.; Golumbek, J.; Cada, G. F.; Goodyear, C. P.; Christensen, S. W.; Cannon, J. B.; Lee, D. W.

    1982-04-01

    This volume includes a series of four exhibits relating to impacts of impingement on fish populations, together with a collection of critical evaluations of testimony prepared for the utilities by their consultants. The first exhibit is a quantitative evaluation of four sources of bias (collection efficiency, reimpingement, impingement on inoperative screens, and impingement survival) affecting estimates of the number of fish killed at Hudson River power plants. The two following exhibits contain, respectively, a detailed assessment of the impact of impingement on the Hudson River white perch population and estimates of conditional impingement mortality rates for seven Hudson River fish populations. The fourth exhibit is an evaluation of the engineering feasibility and potential biological effectiveness of several types of modified intake structures proposed as alternatives to cooling towers for reducing impingement impacts. The remainder of Volume II consists of critical evaluations of the utilities' empirical evidence for the existence of density-dependent growth in young-of-the-year striped bass and white perch, of their estimate of the age-composition of the striped bass spawning stock in the Hudson River, and of their use of the Lawler, Matusky, and Skelly (LMS) Real-Time Life Cycle Model to estimate the impact of entrainment and impingement on the Hudson River striped bass population.

  1. An ovary transcriptome for all maturational stages of the striped bass (Morone saxatilis, a highly advanced perciform fish

    Directory of Open Access Journals (Sweden)

    Reading Benjamin J

    2012-02-01

    Full Text Available Abstract Background The striped bass and its relatives (genus Morone are important fisheries and aquaculture species native to estuaries and rivers of the Atlantic coast and Gulf of Mexico in North America. To open avenues of gene expression research on reproduction and breeding of striped bass, we generated a collection of expressed sequence tags (ESTs from a complementary DNA (cDNA library representative of their ovarian transcriptome. Results Sequences of a total of 230,151 ESTs (51,259,448 bp were acquired by Roche 454 pyrosequencing of cDNA pooled from ovarian tissues obtained at all stages of oocyte growth, at ovulation (eggs, and during preovulatory atresia. Quality filtering of ESTs allowed assembly of 11,208 high-quality contigs ≥ 100 bp, including 2,984 contigs 500 bp or longer (average length 895 bp. Blastx comparisons revealed 5,482 gene orthologues (E-value -3, of which 4,120 (36.7% of total contigs were annotated with Gene Ontology terms (E-value -6. There were 5,726 remaining unknown unique sequences (51.1% of total contigs. All of the high-quality EST sequences are available in the National Center for Biotechnology Information (NCBI Short Read Archive (GenBank: SRX007394. Informative contigs were considered to be abundant if they were assembled from groups of ESTs comprising ≥ 0.15% of the total short read sequences (≥ 345 reads/contig. Approximately 52.5% of these abundant contigs were predicted to have predominant ovary expression through digital differential display in silico comparisons to zebrafish (Danio rerio UniGene orthologues. Over 1,300 Gene Ontology terms from Biological Process classes of Reproduction, Reproductive process, and Developmental process were assigned to this collection of annotated contigs. Conclusions This first large reference sequence database available for the ecologically and economically important temperate basses (genus Morone provides a foundation for gene expression studies in these

  2. An ovary transcriptome for all maturational stages of the striped bass (Morone saxatilis), a highly advanced perciform fish.

    Science.gov (United States)

    Reading, Benjamin J; Chapman, Robert W; Schaff, Jennifer E; Scholl, Elizabeth H; Opperman, Charles H; Sullivan, Craig V

    2012-02-21

    The striped bass and its relatives (genus Morone) are important fisheries and aquaculture species native to estuaries and rivers of the Atlantic coast and Gulf of Mexico in North America. To open avenues of gene expression research on reproduction and breeding of striped bass, we generated a collection of expressed sequence tags (ESTs) from a complementary DNA (cDNA) library representative of their ovarian transcriptome. Sequences of a total of 230,151 ESTs (51,259,448 bp) were acquired by Roche 454 pyrosequencing of cDNA pooled from ovarian tissues obtained at all stages of oocyte growth, at ovulation (eggs), and during preovulatory atresia. Quality filtering of ESTs allowed assembly of 11,208 high-quality contigs ≥ 100 bp, including 2,984 contigs 500 bp or longer (average length 895 bp). Blastx comparisons revealed 5,482 gene orthologues (E-value Read Archive (GenBank: SRX007394). Informative contigs were considered to be abundant if they were assembled from groups of ESTs comprising ≥ 0.15% of the total short read sequences (≥ 345 reads/contig). Approximately 52.5% of these abundant contigs were predicted to have predominant ovary expression through digital differential display in silico comparisons to zebrafish (Danio rerio) UniGene orthologues. Over 1,300 Gene Ontology terms from Biological Process classes of Reproduction, Reproductive process, and Developmental process were assigned to this collection of annotated contigs. This first large reference sequence database available for the ecologically and economically important temperate basses (genus Morone) provides a foundation for gene expression studies in these species. The predicted predominance of ovary gene expression and assignment of directly relevant Gene Ontology classes suggests a powerful utility of this dataset for analysis of ovarian gene expression related to fundamental questions of oogenesis. Additionally, a high definition Agilent 60-mer oligo ovary 'UniClone' microarray with 8 × 15

  3. Summer habitat selection by striped bass, Morone Saxatilis, in Cherokee Reservoir, Tennessee, 1977

    Energy Technology Data Exchange (ETDEWEB)

    Waddle, H.R.; Coutant, C.C.; Wilson, J.L.

    1980-02-01

    Summer habitat selection patterns of 18 adult striped bass (Morone saxatilis) in Cherokee Reservoir were monitored with externally attached temperature-sensing acoustic or radio transmitters from June through September 1977. Mortalities of adult striped bass in this reservoir were hypothesized to be related to high summer temperatures and low dissolved oxygen (DO). The inhabited areas or refuges differed from noninhabited areas by maintaining temperatures less than or equal to 22 C and DO concentrations greater than 5 mg/liter. Total water hardness, pH, and water transparency were not significantly different among refuges and noninhabited areas. Movement of fish outside refuges occurred more frequently and for longer periods during June when the summer pattern of high temperatures and low DO was less severe. Fish experienced temperatures between 15 and 27 C with mean temperatures of individuals ranging from 18.5 to 22.0 C. Several tagged fish migrated outside the refuges and selected the lowest available temperature, generally near 21 C, even though DO concentrations at these temperatures were 3 mg/liter or less. Long-term survival of tagged and nontagged fish outside refuges was undetermined because no fish were tracked outside a refuge for more than 12 days without being lost. This study indicates that temperature strongly influences the behavior of striped bass and that adults of this species may have a thermal preferendum of approximately 21 C.

  4. Recovery of barotrauma injuries resulting from exposure to pile driving sound in two sizes of hybrid striped bass.

    Directory of Open Access Journals (Sweden)

    Brandon M Casper

    Full Text Available The effects of loud sounds on fishes, such as those produced during impulsive pile driving, are an increasing concern in the management of aquatic ecosystems. However, very little is known about such effects. Accordingly, a High Intensity Controlled Impedance Fluid Filled wave Tube (HICI-FT was used to investigate the effects of sounds produced by impulsive pile driving on two size groups of hybrid striped bass (white bass Moronechrysops x striped bass Moronesaxatilis. The larger striped bass (mean size 17.2 g had more severe injuries, as well as more total injuries, than the smaller fish (mean size 1.3 g. However, fish in each size group recovered from most injuries within 10 days of exposure. A comparison with different species from previously published studies show that current results support the observation that fishes with physoclistous swim bladders are more susceptible to injury from impulsive pile driving than are fishes with physostomous swim bladders.

  5. Reducing dietary protein in pond production of hybrid striped bass (Morone chrysops x M. saxatilis): Effects on fish performance and water quality dynamics

    Science.gov (United States)

    In previous work, we demonstrated that diets containing 40% digestible protein (DP) (45% crude protein) and 18 %lipid supplemented with Met and Lys resulted in superior performance and nutrient retentions in hybrid striped bass compared to less energy-dense diets when rearing hybrid striped bass at ...

  6. A large volume striped bass egg incubation chamber: design and comparison with a traditional method

    Science.gov (United States)

    Harper, C.J.

    2009-01-01

    I conducted a comparative study of a new jar design (experimental chamber) with a standard egg incubation vessel (McDonald jar). Experimental chambers measured 0.4 m in diameter by 1.3 m in height and had a volume of 200 L. McDonald hatching jars measured 16 cm in diameter by 45 cm in height and had a volume of 6 L. Post-hatch survival was estimated at 48, 96 and 144 h. Stocking rates resulted in an average egg density of 21.9 eggs ml-1 (range = 21.6 – 22.1) for McDonald jars and 10.9 eggs ml-1 (range = 7.0 – 16.8) for experimental chambers. I was unable to detect an effect of container type on survival to 48, 96 or 144 h. At 144 h striped bass fry survival averaged 37.3% for McDonald jars and 34.2% for experimental chambers. Survival among replicates was significantly different. Survival of striped bass significantly decreased between 96 and 144 h. Mean survival among replicates ranged from 12.4 to 57.3%. I was unable to detect an effect of initial stocking density on survival. Experimental jars allow for incubation of a larger number of eggs in a much smaller space. As hatchery production is often limited by space or water supply, experimental chambers offer an alternative to extending spawning activities, thereby reducing manpower and cost. However, the increase in the number of eggs per rearing container does increase the risk associated with catastrophic loss of a production unit. I conclude the experimental chamber is suitable for striped bass egg incubation.

  7. Isolation and characterization of mycobacteria from striped bass Morone saxatilis from the Chesapeake Bay

    Science.gov (United States)

    Rhodes, M.W.; Kator, H.; Kaattari, I.; Gauthier, D.; Vogelbein, W.; Ottinger, C.A.

    2004-01-01

    Mycobacteriosis in striped bass Morone saxatilis of Chesapeake Bay, USA, was first diagnosed in 1997 based on the presence of granulomatous inflammation and acid-fast bacteria in skin and spleen. To confirm histopathology, bacteriological detection and identification of mycobacteria were begun using splenic tissue from fish with and without skin ulcerations. On the basis of initial studies using a variety of selective and nonselective media, decontamination, homogenization and incubation conditions, a simple and quantitative recovery method using aseptic necropsy of splenic tissue was developed. Optimal recovery was obtained by spread-plating homogenates on Middlebrook 7H10 agar with incubation for 3 mo at 23??C. Mycobacteria were recovered from 76% (n = 149/196) of fish examined. Mycobacterial densities exceeded 104 colony forming units??g tissue-1 in 38% of samples (n = 63/168) that were examined using a quantitative approach. The most frequently recovered mycobacterium, present in 57% (n = 109/192) of characterized samples, was the recently named new species Mycobacterium shottsii. Polyinfections of M. shottsii and other mycobacteria were observed in 25% of samples (n = 47/192) with densities of M. shottsii usually 1 or more orders of magnitude higher than co-isolate(s). Other mycobacteria recovered included isolates that, based on phenotypic traits, resembled M. interjectum, M. marinum, M. scrofulaceum, M. szulgai and M. triplex. M. marinum, commonly associated with fish mycobacteriosis and human disease, was recovered infrequently (3%, n = 6/192). The presence of multiple mycobacterial types occurring at high densities suggests that a variety of mycobacteria could be causative agents of mycobacteriosis in striped bass from the Chesapeake Bay. Striped bass is the major recreational fish species in the Chesapeake Bay, and the significance of the current epizootic to human health and the potential adverse effects on fish stocks are not known.

  8. IGF-I and branchial IGF receptor expression and localization during salinity acclimation in striped bass

    DEFF Research Database (Denmark)

    Tipsmark, Christian Kølbaek; Luckenbach, John Adam; Madsen, Steffen

    2007-01-01

    The initial response of the IGF-I system and the expression and cellular localization of IGF type-I receptor (IGF-IR) were studied in the gill of a euryhaline teleost during salinity acclimation. Exposure of striped bass (Morone saxatilis) to hyperosmotic and hypoosmotic challenges induced small...... in either plasma IGF-I, liver, or gill IGF-I mRNA, or gill IGF-IR mRNA levels. In a separate experiment, FW-acclimated fish were injected with saline or IGF-I prior to a 24-h SW challenge. Rapid regain of osmotic balance following SW transfer was hindered by IGF-I. Immunohistochemistry revealed...

  9. Diversity in destinations, routes and timing of small adult and sub-adult striped bass Morone saxatilis on their southward autumn migration

    Science.gov (United States)

    Mather, Martha E.; Finn, John T.; Pautzke, Sarah M.; Fox, Dewayne A.; Savoy, Tom; Brundage, Harold M.; Deegan, Linda A.; Muth, Robert M.

    2010-01-01

    Almost three-quarters of the 46 young adult and sub-adult striped bass Morone saxatilis that were acoustically tagged in Plum Island Estuary, Massachusetts, U.S.A., in the summer of 2006 were detected in one or more southern coastal arrays during their autumn migration. On the basis of the trajectories along which these M. saxatilis moved from feeding to overwintering areas, three migratory groups emerged. After leaving Plum Island Estuary, about half of the fish were detected only in a mid-latitude array, Long Island Sound. The other half of the tagged fish were detected during autumn and winter in a more southern array, the Delaware Estuary. This latter group of fish may have used two routes. Some travelled to the Delaware Estuary through Long Island Sound while other fish may have taken a second, more direct, coastal route that did not include Long Island Sound. Consequently, a seemingly homogeneous group of fish tagged at the same time in the same non-natal feeding location exhibited a diversity of southward movement patterns that could affect population-level processes. These three groups that differed in overwintering location and migration route could be movement contingents with migratory connectivity.

  10. Effect of salinity on expression of branchial ion transporters in striped bass (Morone saxatilis)

    DEFF Research Database (Denmark)

    Tipsmark, Christian Kølbaek; Madsen, Steffen Søndergaard; Borski, Russell John

    2004-01-01

    The time course of osmoregulatory adjustments and expressional changes of three key ion transporters in the gill were investigated in the striped bass during salinity acclimations. In three experiments, fish were transferred from fresh water (FW) to seawater (SW), from SW to FW, and from 15-ppt b...

  11. Structure and Specificity of a Binary Tandem Domain F-Lectin from Striped Bass (Morone saxatilis)

    Energy Technology Data Exchange (ETDEWEB)

    Bianchet, M.; Odom, E; Vasta, J; Amzel, M

    2010-01-01

    The plasma of the striped bass Morone saxatilis contains a fucose-specific lectin (MsaFBP32) that consists of two F-type carbohydrate recognition domains (CRDs) in tandem. The crystal structure of the complex of MsaFBP32 with l-fucose reported here shows a cylindrical 81-A-long and 60-A-wide trimer divided into two globular halves: one containing N-terminal CRDs (N-CRDs) and the other containing C-terminal CRDs (C-CRDs). The resulting binding surfaces at the opposite ends of the cylindrical trimer have the potential to cross-link cell surface or humoral carbohydrate ligands. The N-CRDs and C-CRDs of MsaFBP32 exhibit significant structural differences, suggesting that they recognize different glycans. Analysis of the carbohydrate binding sites provides the structural basis for the observed specificity of MsaFBP32 for simple carbohydrates and suggests that the N-CRD recognizes more complex fucosylated oligosaccharides and with a relatively higher avidity than the C-CRD. Modeling of MsaFBP32 complexed with fucosylated glycans that are widely distributed in prokaryotes and eukaryotes rationalizes the observation that binary tandem CRD F-type lectins function as opsonins by cross-linking 'non-self' carbohydrate ligands and 'self' carbohydrate ligands, such as sugar structures displayed by microbial pathogens and glycans on the surface of phagocytic cells from the host.

  12. Individual-based model of young-of-the-year striped bass population dynamics. II. Factors affecting recruitment in the Potomac River, Maryland

    Energy Technology Data Exchange (ETDEWEB)

    Cowan, J.H. (Univ. of South Alabama, Mobile, AL (United States)); Rose, K.A. (Oak Ridge National Lab., TN (United States)); Rutherford, E.S.; Houde, E.D. (Univ. of Maryland System, Solomons, MD (United States))

    1993-05-01

    An individual-based model of the population dynamics of young-of-the-year striped bass Morone saxatilis in the Potomac River, Maryland, was used to test the hypothesis that historically high recruitment variability can be explained by changes in environmental and biological factors that result in relatively small changes in growth and mortality rates of striped bass larvae. The four factors examined were (1) size distribution of female parents, (2) zooplankton prey density during the development of striped bass larvae, (3) density of completing larval white perch M. americana, and (4) temperature during larval development. Simulation results suggest that variations in female size and in prey for larvae alone could cause 10-fold variability in recruitment. But no single factor alone caused changes in vital rates of age-0 fish that could account for the 145-fold variability in the Potomac River index of juvenile recruitment. However, combined positive or negative effects of two or more factors resulted in more than a 150-fold simulated recruitment variability, suggesting that combinations of factors can account for the high observed annual variability in striped bass recruitment success. Higher cumulative mortality of feeding larvae and younger life stages than of juveniles was common to all simulations. supporting the contention that striped bass year-class strength is determined prior to metamorphosis. 76 refs., 7 figs., 4 tabs.

  13. Largemouth bass (Micropterus salmoides) and striped mullet (Mugil cephalus) as vectors of contaminants to human consumers in northwest Florida

    Science.gov (United States)

    Karouna-Renier, Natalie K.; Snyder, Richard A.; Lange, Ted; Gibson, Suzanne; Allison, Jeffrey G.; Wagner, Matthew E.; Rao, K. Ranga

    2011-01-01

    The health benefits of regular consumption of fish and seafood have been espoused for many years. However, fish are also a potential source of environmental contaminants that have well known adverse effects on human health. We investigated the consumption risks for largemouth bass (Micropterus salmoides; n = 104) and striped mullet (Mugil cephalus; n = 170), two commonly harvested and consumed fish species inhabiting fresh and estuarine waters in northwest Florida. Skinless fillets were analyzed for total mercury, inorganic arsenic, polychlorinated dibenzo-p-dioxins and polychlorinated dibenzofurans (PCDD/F), polychlorinated biphenyls (PCBs), and organochlorine pesticides. Contaminant levels were compared to screening values (SV) calculated using U.S. Environmental Protection Agency (EPA) recommendations for establishing consumption advisories. Largemouth bass were found to contain high levels of total mercury at all sampling locations (0.37-0.89 ug/g) and one location exhibited elevated total PCBs (39.4 ng/g). All of the samples exceeded Florida fish consumption advisory trigger levels for total mercury and one location exceeded the U.S. EPA SV for total PCBs. As a result of the high mercury levels, the non-cancer health risks (hazard index-HI) for bass were above 1 for all locations. Striped mullet from several locations with known point sources contained elevated levels of PCBs (overall range 3.4-59.3 ng/g). However, total mercury levels in mullet were low. Eight of the 16 mullet sampling locations exceeded the U.S. EPA SV for total PCBs and two locations exceeded an HI of 1 due to elevated PCBs. Despite the elevated levels of total PCBs in some samples, only two locations exceeded the acceptable cancer risk range and therefore cancer health risks from consumption of bass and mullet were determined to be low at most sampling locations.

  14. Assimilation and retention of selenium and other trace elements from crustacean food by juvenile striped bass (Morone saxatilis)

    Science.gov (United States)

    Baines, Stephen B.; Fisher, Nicholas S.; Stewart, Robin

    2002-01-01

     Estimates of the assimilation and retention of trace elements from food by fish are useful for linking toxicity with the biogeochemical cycling of these elements through aquatic food webs. Here we use pulse-chase radiotracer techniques to estimate the assimilation and retention of Se and four trace metals, Ag, Am, Zn, and Cd, by 43- and 88-d-old juvenile striped bass, Morone saxatilis, from crustacean food. Brine shrimp nauplii, Artemia franciscana, or adult copepods,Acartia tonsa, were fed radiolabeled diatoms and then fed to juvenile striped bass. Assimilation efficiencies (AEs ± SD) for 43-d-old fish were 18 ± 2%, 6 ± 1%, 23 ± 4%, 33 ± 3%, and 23 ± 2% for Ag, Am, Cd, Se, and Zn, respectively. For 88-d-old fish, the AEs were 28 ± 1%, 42 ± 5%, and 40 ± 5% for Cd, Se, and Zn, respectively. The higher AEs in the older fish may result from longer gut passage times for larger fish. The 44-d-old fish excreted 5 ± 0.8%, 4 ± 2.0%, 7 ± 0.3%, 9 ± 0.4%, and 1.3 ± 0.9% of the Ag, Am, Cd, Se, and Zn, respectively, they ingested from food per day, whereas the 88-d-old fish excreted 3 ± 1.0%, 8 ± 0.5%, and 3 ± 0.5% of the assimilated Cd, Se, and Zn per day, respectively. Predictions of steady state Se concentrations in juvenile striped bass tissues made using a biokinetic model and the measured AE and efflux rates ranged from 1.8 to 3.0 mg Se g-1dry wt for muscle tissue and 6.8 to 11.6 mg Se g-1 dry wt for gut tissue. These predictions agreed well with average values of 2.1 and 13 mg Se g-1 dry wt measured independently in North San Francisco Bay, where elevated Se concentrations are of concern. The model results imply that the planktonic food web, including juvenile striped bass, does not transfer Se as efficiently to top consumers as does the benthic food web.

  15. Incidental catch and mortality of striped bass, Morone saxatilis, in the commercial bay shrimp trawl fishery in the San Francisco estuarine complex

    OpenAIRE

    Reilly, Paul N.

    1991-01-01

    The commercial bay shrimp fishery was monitored from April 1989 to September 1990 in south San Francisco Bay, and from September 1989 to September 1990 in San Pablo Bay and Carquinez Strait, to estimate incidental catch and mortality of young-of-the-year (YOY), juvenile and adult striped bass. Of the total estimated by-catch of 44,000 to 52,000 YOY bass, 98.5% were taken in San Pablo Bay. Of the total estimated bycatch of 3160 to 3570 older bass, approximately 75% w...

  16. Biotelemetry study of spring and summer habitat selection by striped bass in Cherokee Reservoir, Tennessee, 1978. [Morone saxatilis

    Energy Technology Data Exchange (ETDEWEB)

    Schaich, B.A.; Coutant, C.C.

    1980-08-01

    Habitat selection of 31 adult striped bass was monitored by temperature sensing ultrasonic and radio transmitters in Cherokee Reservoir, Tennessee, from March through October 1978. This study sought to corroborate summer data obtained by Waddle (1979) in 1977 and to examine mechanisms of habitat selection by observing establishment of the summer distribution. During the spring and early summer months the striped bass ranged throughout the study area in the downstream half of the reservoir. Fish stayed near the bottom at the preferred temperatures throughout the whole study, and no individuals were observed in open water. Movement rates of up to 2.6 km/day were estimated, and rates of 1 km/day were common in the spring. By late July they were apparently avoiding low dissolved oxygen (D.O.) concentrations (<3 mg/l) near the bottom of the main reservoir and epilimnion temperatures greater than 22/sup 0/C, and they moved into cool, oxygenated spring or creek channels (refuges). Low movement rates of 0 to 25 m/day within these refuges occurred. The rates of the few migrations between refuges could not be estimated. Tagged fish moved out of the refuges 3 to 4 weeks after the fall overturn when reservoir temperatures approximated 22 to 24/sup 0/C.

  17. Computer simulation model for the striped bass young-of-the-year population in the Hudson River. [Effects of entrainment and impingement at power plants on population dynamics

    Energy Technology Data Exchange (ETDEWEB)

    Eraslan, A.H.; Van Winkle, W.; Sharp, R.D.; Christensen, S.W.; Goodyear, C.P.; Rush, R.M.; Fulkerson, W.

    1975-09-01

    This report presents a daily transient (tidal-averaged), longitudinally one-dimensional (cross-section-averaged) computer simulation model for the assessment of the entrainment and impingement impacts of power plant operations on young-of-the-year populations of the striped bass, Morone saxatilis, in the Hudson River.

  18. VACCINATION OF HYBRID STRIPED BASS: GROWTH, IMMUNE REACTION AND GENE EXPRESSION

    Directory of Open Access Journals (Sweden)

    Mark Westerman

    2012-10-01

    Full Text Available Hybrid striped bass (42.6+4.9 g wet wt; 139.3+6.1 mm length, were randomly stocked into one of 6 tanks (n=6 tank-1 of a custom designed, recirculating life support system (RLSS. Water quality was as follows: DO2 (6.50.6 mg l-1, pH (7.70.5, TAN (0.06-1.31 mg l-1, nitrite (0.06-0.60 mg l-1 and nitrate (2.0-32.1 mg l-1, salinity 5 ppt, temperature 28±1 oC. A 12:12 photophase:scotophase was used, with a 30 min. dusk-dawn dimming of lights. Fish were fed at 4% body wt d-1 as two separate feedings (08.00 and 16.00 h. Dietary crude protein and lipid levels were 40% and 10% respectively. Tanks were randomly paired and fish either left untreated, vaccinated, or sham injected. The vaccine employed was an experimental formalin killed Streptococcus iniae oil-in-water adjuvanted bacterin. Fish were weighed and measured bimonthly for 8 wk with group weights being employed to adjust feeding rates. At trial termination, all animals were weighed and measured, and their condition factor (CF and feed conversion ratios (FCR calculated. Visceral somatic (VSI and hepatosomatic (HSI indices and intraperitoneal fat (IPF and muscle ratios (MR were also assessed. Blood was taken from anaesthetized fish and hematocrit recorded. Blood was allowed to clot overnight at 5 oC after which serum protein levels were recorded and lysozyme activity measured. Livers were prepared for microarray evaluation using standard techniques using a Danio rerio genechip to assess global changes in gene expression. No differences were observed with respect to final weights, lengths, CF, FCR, or HSI although differences (P < 0.001 were determined for VSI, which was higher in control animals. Packed cell volume and serum protein levels were similar across groups (P > 0.05. Time-course of changes in serum lysozyme activity described an initial reduction in lysozyme activity followed by a rebounding in activity which peaked 25 days post-treatments. Evaluation of lysozyme activity among time

  19. Hepatic transcriptomic and metabolic responses of hybrid striped bass (Morone saxatilis×Morone chrysops) to acute and chronic hypoxic insult.

    Science.gov (United States)

    Beck, Benjamin H; Fuller, S Adam; Li, Chao; Green, Bartholomew W; Zhao, Honggang; Rawles, Steven D; Webster, Carl D; Peatman, Eric

    2016-06-01

    Striped bass (Morone saxatilis), white bass (Morone chrysops), and their hybrid are an important group of fish prized for recreational angling in the United States, and there and abroad as a high-value farmed fish. Regardless of habitat, it is not uncommon for fish of the genus Morone to encounter and cope with conditions of scarce oxygen availability. Previously, we determined that hybrid striped bass reared under conditions of chronic hypoxia exhibited reduced feed intake, lower lipid and nutrient retention, and poor growth. To better understand the molecular mechanisms governing these phenotypes, in the present study, we examined the transcriptomic profiles of hepatic tissue in hybrid striped bass exposed to chronic hypoxia (90days at 25% oxygen saturation) and acute hypoxia (6h at 25% oxygen saturation). Using high-throughput RNA-seq, we found that over 1400 genes were differentially expressed under disparate oxygen conditions, with the vast majority of transcriptional changes occurring in the acute hypoxia treatment. Gene pathway and bioenergetics analyses revealed hypoxia-mediated perturbation of genes and gene networks related to lipid metabolism, cell death, and changes in hepatic mitochondrial content and cellular respiration. This study offers a more comprehensive view of the temporal and tissue-specific transcriptional changes that occur during hypoxia, and reveals new and shared mechanisms of hypoxia tolerance in teleosts. Published by Elsevier Inc.

  20. Depletion of the chloramine-T marker residue, para-toluenesulfonamide, from skin-on fillet tissue of hybrid striped bass, rainbow trout, and yellow perch

    Science.gov (United States)

    Meinertz, J.R.; Stehly, G.R.; Greseth, Shari L.; Gaikowski, M.P.; Gingerich, W.H.

    2004-01-01

    Waterborne exposure to n-sodium-n-chloro-p-toluenesulfonamide (chloramine-T) is an effective treatment for controlling fish mortalities caused by bacterial gill disease (BGD). Currently, data are being generated to gain United States Food and Drug Administration (FDA) approval for the use of chloramine-T in aquaculture. As part of the data required for an approval, depletion of the chloramine-T marker residue (para-toluenesulfonamide [p-TSA]) from the edible fillet tissue of exposed fish must be determined. Hybrid striped bass (Morone saxatilis??Morone chrysops; mean weight 357 g), rainbow trout (Oncorhynchus mykiss; mean weight 457 g), and yellow perch (Perca flavescens; mean weight 144 g) were exposed to 20 mg/l of chloramine-T for 60 min on 4 consecutive days (the most aggressive treatment expected for approved use in the United States). Groups of fish (n=15 or 19) were sampled immediately after the last treatment and periodically through 48 or 168 h after the treatment phase. Duplicate subsamples of skin-on fillet tissue from each fish were analyzed for p-TSA. Mean p-TSA concentrations in fillet tissue from fish sampled immediately after the last treatment were 142 ng/g (hybrid striped bass), 97 ng/g (rainbow trout), and 150 ng/g (yellow perch). Mean p-TSA concentrations at terminal sample times were 94 (168 h; hybrid striped bass), 74 (48 h; rainbow trout), and 35 ng/g (168 h; yellow perch). The half-lives of p-TSA in fillet tissue from fish near or at market size were 11.4 (hybrid striped bass), 4.3 (rainbow trout), and 3.2 days (yellow perch).

  1. Ovary transcriptome profiling via artificial intelligence reveals a transcriptomic fingerprint predicting egg quality in striped bass, Morone saxatilis.

    Science.gov (United States)

    Chapman, Robert W; Reading, Benjamin J; Sullivan, Craig V

    2014-01-01

    Inherited gene transcripts deposited in oocytes direct early embryonic development in all vertebrates, but transcript profiles indicative of embryo developmental competence have not previously been identified. We employed artificial intelligence to model profiles of maternal ovary gene expression and their relationship to egg quality, evaluated as production of viable mid-blastula stage embryos, in the striped bass (Morone saxatilis), a farmed species with serious egg quality problems. In models developed using artificial neural networks (ANNs) and supervised machine learning, collective changes in the expression of a limited suite of genes (233) representing 90% of the eventual variance in embryo survival. Egg quality related to minor changes in gene expression (humans. By assessing collective levels of the relevant ovarian transcripts via ANNs we were able, for the first time in any vertebrate, to accurately predict the subsequent embryo developmental potential of eggs from individual females. Our results show that the transcriptomic fingerprint evidencing developmental dysfunction is highly predictive of, and therefore likely to regulate, egg quality, a biologically complex trait crucial to reproductive fitness.

  2. Ovary transcriptome profiling via artificial intelligence reveals a transcriptomic fingerprint predicting egg quality in striped bass, Morone saxatilis.

    Directory of Open Access Journals (Sweden)

    Robert W Chapman

    Full Text Available Inherited gene transcripts deposited in oocytes direct early embryonic development in all vertebrates, but transcript profiles indicative of embryo developmental competence have not previously been identified. We employed artificial intelligence to model profiles of maternal ovary gene expression and their relationship to egg quality, evaluated as production of viable mid-blastula stage embryos, in the striped bass (Morone saxatilis, a farmed species with serious egg quality problems. In models developed using artificial neural networks (ANNs and supervised machine learning, collective changes in the expression of a limited suite of genes (233 representing 90% of the eventual variance in embryo survival. Egg quality related to minor changes in gene expression (<0.2-fold, with most individual transcripts making a small contribution (<1% to the overall prediction of egg quality. These findings indicate that the predictive power of the transcriptome as regards egg quality resides not in levels of individual genes, but rather in the collective, coordinated expression of a suite of transcripts constituting a transcriptomic "fingerprint". Correlation analyses of the corresponding candidate genes indicated that dysfunction of the ubiquitin-26S proteasome, COP9 signalosome, and subsequent control of the cell cycle engenders embryonic developmental incompetence. The affected gene networks are centrally involved in regulation of early development in all vertebrates, including humans. By assessing collective levels of the relevant ovarian transcripts via ANNs we were able, for the first time in any vertebrate, to accurately predict the subsequent embryo developmental potential of eggs from individual females. Our results show that the transcriptomic fingerprint evidencing developmental dysfunction is highly predictive of, and therefore likely to regulate, egg quality, a biologically complex trait crucial to reproductive fitness.

  3. Selective analysis of power plant operation on the Hudson River with emphasis on the Bowline Point Generating Station. Volume 1. [Effects on striped bass population

    Energy Technology Data Exchange (ETDEWEB)

    Barnthouse, L. W.; Cannon, J. B.; Christensen, S. G.

    1977-07-01

    A comprehensive study of the effects of power plant operation on the Hudson River was conducted. The study included thermal, biological, and air quality effects of existing and planned electrical generating stations. This section on thermal impacts presents a comprehensive mathematical modeling and computer simulation study of the effects of heat rejection from the plants. The overall study consisted of three major parts: near-field analysis; far-field analysis; and zone-matched near-field/far-field analysis. Near-field analyses were completed for Roseton, Danskammer, and Bowline Point Generating Stations, and near-field dilution ratios range from a low of about 2 for Bowline Point and 3 for Roseton to a maximum of 6 for both plants. The far-field analysis included a critical review of existing studies and a parametric review of operating plants. The maximum thermal load case, based on hypothetical 1974 river conditions, gives the daily maximum cross-section-averaged and 2-mile-segment-averaged water temperatures as 83.80/sup 0/F in the vicinity of the Indian Point Station and 83.25/sup 0/F in the vicinity of the Bowline Station. This maximum case will be significantly modified if cooling towers are used at certain units. A full analysis and discussion of these cases is presented. A study of the Hudson River striped bass population is divided into the following eight subsections: distribution of striped bass eggs, larvae, and juveniles in the Hudson River; entrainment mortality factor; intake factor; impingement; effects of discharges; compensation; model estimates of percent reduction; and Hudson River striped bass stock.

  4. Branchial expression and localization of the insulin-like growth factor 1 (IGF-1) receptor and changes in plasma IGF-1 and IGF-1 binding protein in striped bass during salinity acclimation

    DEFF Research Database (Denmark)

    Tipsmark, Christian Kølbæk; Madsen, Steffen; Borski, Russell

    2006-01-01

    In euryhaline teleosts the insulin-like growth factor 1 (IGF-1)/growth hormone axis is known to affect salinity tolerance and gill Na,K-ATPase activity. However, virtually nothing is known on expression and cellular localization of the IGF-1 receptor (IGF-1R) in the teleost gill during salinity...... acclimation. In the present study, primers for the IGF type 1 receptor from striped bass (Morone saxatilis) were designed for a real-time quantitative PCR assay. Two salinity transfer experiments were performed and the time-course of gill IGF-1R expression was examined in parallel with changes in plasma IGF-1...... in the striped bass. Transfer from freshwater (FW) to seawater (SW) induced an overall increase in gill IGF-1R mRNA expression (Peffect on gill IGF-1R expression, while plasma IGF-1...

  5. A decadal trend of juvenile European sea bass (Dicentrarchus labrax, L. responses to climate patterns in the Mondego estuary, Portugal

    Directory of Open Access Journals (Sweden)

    Eduardo Granja Bento

    2015-11-01

    Full Text Available Estuarine systems support the life cycle stages of commercially important marine fish and are influenced by large and local-scale climatic patterns. Also, extreme events triggered by climate changes may influence the functioning of nursery grounds and recruitment for several fish species. In this study, performed in the Mondego estuary, Portugal, we used an 11-year database (2003-2013 for analyzing the variability in the population of a marine juvenile migrant fish, the European sea bass Dicentrarchus labrax, regarding changes in abundance, population structure, growth rates and secondary production and annual day of peak abundance. Higher densities and production occurred at the beginning of the study, but no differences in 0-group growth could be observed. In order to detect change points in both biological and climatic data, the cumulative sum (CUSUM of the deviations from the mean for the 2003-2013 period were determined for each parameter. The relationship between large- and local-scale drivers and 0-group abundance, secondary production and day of peak abundance were evaluated using a Pearson correlation analysis of CUSUM of biological and environmental data, considering the correspondent yearly values and with a time-lag of 1 year. The North Atlantic Oscillation (NAO index, sea surface temperature (SST and their respective winter values were tested as large-scale factors, while river runoff, salinity and water temperature were considered as local climate patterns. River runoff was the significant factor explaining D. labrax 0-group abundances and the NAO and water temperature were also significant predictors considering the 1-year lag. Regarding D. labrax 0-group secondary production, salinity and water temperature were the significant predictors. The NAO with 1-year lag was also negatively correlated with the day of peak abundance. The observed variability regarding yearly trends in abundance of juvenile fish was mostly linked to local

  6. Critique and sensitivity analysis of the compensation function used in the LMS Hudson River striped bass models. Environmental Sciences Division publication No. 944

    Energy Technology Data Exchange (ETDEWEB)

    Van Winkle, W.; Christensen, S.W.; Kauffman, G.

    1976-12-01

    The description and justification for the compensation function developed and used by Lawler, Matusky and Skelly Engineers (LMS) (under contract to Consolidated Edison Company of New York) in their Hudson River striped bass models are presented. A sensitivity analysis of this compensation function is reported, based on computer runs with a modified version of the LMS completely mixed (spatially homogeneous) model. Two types of sensitivity analysis were performed: a parametric study involving at least five levels for each of the three parameters in the compensation function, and a study of the form of the compensation function itself, involving comparison of the LMS function with functions having no compensation at standing crops either less than or greater than the equilibrium standing crops. For the range of parameter values used in this study, estimates of percent reduction are least sensitive to changes in YS, the equilibrium standing crop, and most sensitive to changes in KXO, the minimum mortality rate coefficient. Eliminating compensation at standing crops either less than or greater than the equilibrium standing crops results in higher estimates of percent reduction. For all values of KXO and for values of YS and KX at and above the baseline values, eliminating compensation at standing crops less than the equilibrium standing crops results in a greater increase in percent reduction than eliminating compensation at standing crops greater than the equilibrium standing crops.

  7. Mercury concentrations in water and hybrid striped bass (Morone saxatilis × M. chrysops) muscle tissue samples collected from the Ohio River, USA.

    Science.gov (United States)

    Emery, Erich B; Spaeth, John P

    2011-04-01

    We report on long-term aqueous mercury (Hg) measurements collected at fixed locations along the Ohio River, offer insights into patterns of water and fish tissue Hg levels, and calculate site-specific bioaccumulation factors (BAFs) along an extensive longitudinal basis. We examined the relationship between total recoverable Hg concentrations in water and fish samples collected from 12 locations on the mainstem Ohio River. Water samples were collected on a bimonthly basis from each location over a 6-year period preceding the collection of fish tissue samples. This abundance of data enabled us to calculate the long-term average aqueous Hg concentrations and approximate the lifetime aqueous Hg exposure experienced by fish, enabling the calculation of appropriate BAFs. Hybrid striped bass (HSB; Morone saxatilis × M. chrysops) were collected from the Ohio River, composited (three fish), and analyzed for Hg in muscle tissue from each location. Concentrations ranged from 0.2 to 0.4 mg/kg and 41.7% of all samples collected were higher than the US Environmental Protection Agency regulatory threshold of 0.3 mg Hg/kg wet weight. Hg levels generally increased with fish weight, length, and age. However, Hg concentration in the water was the strongest predictor of tissue concentrations. We found that both water and tissue concentrations increased with drainage area, albeit at different rates. This discrepancy in spatial patterns revealed that the bioaccumulation rate of methylmercury might not be consistent throughout the Ohio River mainstem. BAFs calculated at each location supported this finding, as values decreased with increasing drainage area. Our study serves to fill critical, previously identified data gaps and provides decision-makers with the information necessary to develop more appropriate BAF development and risk-management strategies. © Springer Science+Business Media, LLC 2010

  8. Nutrient budgets, marsh inundation under sea-level rise scenarios, and sediment chronologies for the Bass Harbor Marsh estuary at Acadia National Park

    Science.gov (United States)

    Huntington, Thomas G.; Culbertson, Charles W.; Fuller, Christopher C.; Glibert, Patricia; Sturtevant, Luke

    2014-01-01

    Eutrophication in the Bass Harbor Marsh estuary on Mount Desert Island, Maine, is an ongoing problem manifested by recurring annual blooms of green macroalgae species, principally Enteromorpha prolifera and Enteromorpha flexuosa, blooms that appear in the spring and summer. These blooms are unsightly and impair the otherwise natural beauty of this estuarine ecosystem. The macroalgae also threaten the integrity of the estuary and its inherent functions. The U.S. Geological Survey and Acadia National Park have collaborated for several years to better understand the factors related to this eutrophication problem with support from the U.S. Geological Survey and National Park Service Water Quality Assessment and Monitoring Program. The current study involved the collection of hydrologic and water-quality data necessary to investigate the relative contribution of nutrients from oceanic and terrestrial sources during summer 2011 and summer 2012. This report provides data on nutrient budgets for this estuary, sedimentation chronologies for the estuary and fringing marsh, and estuary bathymetry. The report also includes data, based on aerial photographs, on historical changes from 1944 to 2010 in estuary surface area and data, based on surface-elevation details, on changes in marsh area that may accompany sea-level rise. The LOADEST regression model was used to calculate nutrient loads into and out of the estuary during summer 2011 and summer 2012. During these summers, tidal inputs of ammonium to the estuary were more than seven times greater than the combined inputs in watershed runoff and precipitation. In 2011 tidal inputs of nitrate were about four times greater than watershed plus precipitation inputs, and in 2012 tidal inputs were only slightly larger than watershed plus precipitation inputs. In 2011, tidal inputs of total organic nitrogen were larger than watershed input by a factor of 1.6. By contrast, in 2012 inputs of total organic nitrogen in watershed runoff

  9. Use of copper sulfate to control Saprolegniasis at a commercial sunshine bass hatchery

    Science.gov (United States)

    An obstacle to sunshine bass (female white bass Morone chrysops × male striped bass M. saxatilis) larval production is fungal growth on eggs caused by the water-mold Saprolegnia spp. Copper sulfate (CuSO4) is commonly used for fungus control in troughs of catfish hatcheries, but the effectiveness o...

  10. Mortality of Palmetto bass following catch-and-release angling

    Science.gov (United States)

    Petersen, M.J.; Bettoli, Phillip William

    2013-01-01

    Palmetto bass (Striped Bass Morone saxatilis x White Bass M. chrysops) have been stocked into reservoirs in the southeastern USA since the late 1960s and have gained widespread acceptance as a sport fish. These fisheries are growing in popularity and catch-and-release (CR) fishing is commonplace; however, there is a dearth of information on CR mortality of palmetto bass. We experimentally angled palmetto bass (n = 56; >373-mm TL) in a Tennessee reservoir using traditional angling gear in water temperatures ranging from 13 °C to 32 °C. Ultrasonic transmitters equipped with floats were externally attached to fish, which were released immediately and tracked multiple times within 10 d of release. Mortality was negligible (3.6%) in fall and spring at cool water temperatures but was high (39.3%) in summer when water temperatures exceeded 26 °C. The best logistic regression model based on Akaike's information criterion for small sample sizes scores relied on water temperature alone to predict CR mortality of palmetto bass; there was little support for other models that included all possible combinations of the six other predictor variables we tested. Palmetto bass in our study experienced lower CR mortality than Striped Bass in other systems, but CR mortality rates for palmetto bass that approach or exceed 40% during summer are still problematic if the goal is to maintain fishing quality.

  11. Predation by introduced largemouth bass Micropterus salmoides on ...

    African Journals Online (AJOL)

    The predatory impact of introduced largemouth bass Micropterus salmoides on the juveniles of estuary-associated indigenous marine fish species in the lower Kowie River and estuary headwaters was investigated in 2012–2013. Stomach contents and stable isotope analyses were employed to assess the dietary ...

  12. Analysis of pelagic species decline in the upper San Francisco Estuary using multivariate autoregressive modeling (MAR)

    Science.gov (United States)

    Mac Nally, Ralph; Thomson, James R.; Kimmerer, Wim J.; Feyrer, Frederick; Newman, Ken B.; Sih, Andy; Bennett, William A.; Brown, Larry; Fleishman, Erica; Culberson, Steven D.; Castillo, Gonzalo

    2010-01-01

    Four species of pelagic fish of particular management concern in the upper San Francisco Estuary, California, USA, have declined precipitously since ca. 2002: delta smelt (Hypomesus transpacificus), longfin smelt (Spirinchus thaleichthys), striped bass (Morone saxatilis), and threadfin shad (Dorosoma petenense). The estuary has been monitored since the late 1960s with extensive collection of data on the fishes, their pelagic prey, phytoplankton biomass, invasive species, and physical factors. We used multivariate autoregressive (MAR) modeling to discern the main factors responsible for the declines. An expert-elicited model was built to describe the system. Fifty-four relationships were built into the model, only one of which was of uncertain direction a priori. Twenty-eight of the proposed relationships were strongly supported by or consistent with the data, while 26 were close to zero (not supported by the data but not contrary to expectations). The position of the 2‰ isohaline (a measure of the physical response of the estuary to freshwater flow) and increased water clarity over the period of analyses were two factors affecting multiple declining taxa (including fishes and the fishes' main zooplankton prey). Our results were relatively robust with respect to the form of stock–recruitment model used and to inclusion of subsidiary covariates but may be enhanced by using detailed state–space models that describe more fully the life-history dynamics of the declining species.

  13. Evaluation of growth, nutrient retention, health, and resistance to bacterial challenge in sunshine bass fed diets with new varieties of non-genetically modified soybeans

    Science.gov (United States)

    We evaluated the effects of meals made from new strains of soybeans with high protein and reduced anti-nutritional factors (ANFs) on hybrid striped bass ("Sunshine bass", Morone chrysops x M. saxatilis) nutrient availability, growth rates, nutrient retention, gut histology, non-specific immune respo...

  14. Evaluation of rumble stripes.

    Science.gov (United States)

    2010-01-01

    The objective of this study were to: a) monitor the initial installations of rumble stripes and b) evaluate the results of rumble stripe installations. : Ten rural, two-lane road locations were selected by the Kentucky Transportation Cabinet across t...

  15. Copper sulfate controls fungus on mat-spawned largemouth bass eggs

    Science.gov (United States)

    Copper sulfate (CuSO4) is widely used by the catfish and hybrid striped bass industries as an economical treatment to control fungus (Saprolegnia spp.) on eggs; these industries use hatching troughs and McDonald jars, respectively, in moderate alkalinity waters. This study determined the effectivene...

  16. Estuaries 1

    OpenAIRE

    Battey, B.

    2016-01-01

    'Estuaries 1' can be viewed at https://vimeo.com/202629040 'Estuaries 1' is the first of the Estuaries series of audiovisual compositions, which explore the expressive potentials of the author's Variable-Coupled Map Networks and OptiNelder methods for generative music and image. It evokes an 'unstable stasis' through processes that are always on the edge of destabilisation.

  17. Estuaries 2

    OpenAIRE

    Battey, B.

    2017-01-01

    'Estuaries 2' is the second of the author's Estuaries series of audiovisual compositions, which explore the expressive potential of the authors Variable-Coupled Map Networks and OptiNelder methods for generative music and images. 'Estuaries 2' focuses on dialog between grid-based logic and all-over textures with random distributions,

  18. The Flexible Bass Absorber

    DEFF Research Database (Denmark)

    Adelman-Larsen, Niels Werner; Thompson, Eric Robert; Gade, Anders Christian

    2007-01-01

    Multi-purpose concert halls face a dilemma. They host different performance types that require significantly different acoustic conditions in order to provide the best sound quality to both the performers, sound engineers and the audience. Pop and rock music often contains high levels of bass sound...

  19. The Flexible Bass Absorber

    DEFF Research Database (Denmark)

    Adelman-Larsen, Niels Werner; Thompson, Eric Robert; Gade, Anders Christian

    2007-01-01

    Multi-purpose concert halls face a dilemma. They host different performance types that require significantly different acoustic conditions in order to provide the best sound quality to both the performers, sound engineers and the audience. Pop and rock music often contain high levels of bass sound...

  20. Impact of entrainment and impingement on fish populations in the Hudson River estuary. Volume I. Entrainment-impact estimates for six fish populations inhabiting the Hudson River estuary

    Energy Technology Data Exchange (ETDEWEB)

    Boreman, J.; Barnthouse, L.W.; Vaughn, D.S.; Goodyear, C.P.; Christensen, S.W.; Kumar, K.D.; Kirk, B.L.; Van Winkle, W.

    1982-01-01

    This volume is concerned with the estimation of the direct (or annual) entrainment impact of power plants on populations of striped bass, white perch, Alosa spp. (blueback herring and alewife), American shad, Atlantic tomcod, and bay anchovy in the Hudson River estuary. Entrainment impact results from the killing of fish eggs, larvae, and young juveniles that are contained in the cooling water cycled through a power plant. An Empirical Transport Model (ETM) is presented as the means of estimating a conditional entrainment mortality rate (defined as the fraction of a year class which would be killed due to entrainment in the absence of any other source of mortality). Most of this volume is concerned with the estimation of several parameters required by the ETM: physical input parameters (e.g., power-plant withdrawal flow rates); the longitudinal distribution of ichthyoplankton in time and space; the duration of susceptibility of the vulnerable organisms; the W-factors, which express the ratios of densities of organisms in power plant intakes to densities of organisms in the river; and the entrainment mortality factors (f-factors), which express the probability that an organism will be killed if it is entrained. Once these values are obtained, the ETM is used to estimate entrainment impact for both historical and projected conditions.

  1. Minimizing use of fish meal in sunshine bass diets using standard and new varieties of non-genetically modified soybeans

    Science.gov (United States)

    Improved plant ingredients are needed to support sustainable culture of carnivorous fish, such as hybrid striped bass (HSB). We are evaluating meals made from new strains of non-genetically-modified soybeans (non-GMO) with high protein and reduced anti-nutritional factors (ANFs) on HSB nutrient dige...

  2. Black Sea Bass genetic connectivity

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Microsatellite analysis of black sea bass was undertaken to determine magnitude and direction of mixing of black seabass across the Hatteras boundary, as well as...

  3. Stripe delay filters

    OpenAIRE

    Zakharov, Alexander V.; Ilchenko, Mykhailo Ye.; Trubarov, Igor V.; Pinchuk, Ludmila S.

    2016-01-01

    There are considered constructions of microsized stripe delay filters, which are realized on a basis of ceramic materials with high dielectric permittivity. Delay time of non-minimal phase filters is 7–12 ns at frequencies of 1900 MHz with relative bandwidth of 3.6–3.85%. Filters dimensions are comparable with ones used in portable communication devices. Dimensions of researched three-resonator filter at frequency of 1900 MHz are 8.4×5×2 mm with material dielectric permittivity εr = 92, and 5...

  4. Exploding Stars and Stripes

    Science.gov (United States)

    2011-03-01

    The discovery of a pattern of X-ray "stripes" in the remains of an exploded star may provide the first direct evidence that a cosmic event can accelerate particles to energies a hundred times higher than achieved by the most powerful particle accelerator on Earth. This result comes from a very long observation of the Tycho supernova remnant with NASA's Chandra X-ray Observatory. It could explain how some of the extremely energetic particles bombarding the Earth, called cosmic rays, are produced. "We've seen lots of intriguing structures in supernova remnants, but we've never seen stripes before," said Kristoffer Eriksen, a postdoctoral researcher at Rutgers University who led the study. "This made us think very hard about what's happening in the blast wave of this powerful explosion." This latest study from Chandra provides support for a theory about how magnetic fields can be dramatically amplified in such blast waves. In this theory, the magnetic fields become highly tangled and the motions of the particles very turbulent near the expanding supernova shock wave at the front edge of the supernova remnant. High-energy charged particles can bounce back and forth across the shock wave repeatedly, gaining energy with each crossing. Theoretical models of the motion of the most energetic particles -- which are mostly protons -- are predicted to leave a messy network of holes and dense walls corresponding to weak and strong regions of magnetic fields, respectively. The X-ray stripes discovered by the Chandra researchers are thought to be regions where the turbulence is greater and the magnetic fields more tangled than surrounding areas, and may be the walls predicted by the theory. Electrons become trapped in these regions and emit X-rays as they spiral around the magnetic field lines. However, the regular and almost periodic pattern of the X-ray stripes was not predicted by the theory. "It was a big surprise to find such a neatly arranged set of stripes," said co

  5. Swartkops estuary

    CSIR Research Space (South Africa)

    Baird, D

    1988-01-01

    Full Text Available The Swartkops estuary has been an object of study for many years and research results obtained during the past 30 years were considered at a symposium in 1987. This report documents the proceedings of this symposium as well as conclusions...

  6. Comparison of highway striping materials.

    Science.gov (United States)

    1980-01-01

    This study was undertaken to investigate problems relating to the durability of pavement striping materials used by the Department. The research was limited to an evaluation of the durability and retroreflectance characteristics of selected paints, t...

  7. Identification, Molecular Cloning of IL-1β and Its Expression Profile during Nocardia seriolae Infection in Largemouth Bass, Micropterus salmoides

    Directory of Open Access Journals (Sweden)

    Ping-Yueh Ho

    2016-10-01

    Full Text Available In the present study, IL-1β cDNA was identified and analyzed from largemouth bass (Micropterus salmoides. Full length IL-1β mRNA was obtained using Rapid Amplification of cDNA Ends (RACE, which contains 78 bp 3′-UTR, a 455 bp 5′-UTR, and an open reading frame (ORF of 702 bp coding for 233 amino acid residues. The molecular weight and theoretical isoelectric point of largemouth bass IL-1β protein was predicted to be 26.7 kDa and 6.08 respectively. A largemouth bass IL-1β phylogenetic analysis showed a close relation to the IL-1βs of striped trumpeter (Latris lineata, Chinese perch (Siniperca chuatsi, and Japanese sea bass (Lateolabrax japonicus. Peptidoglycan upregulated IL-1β in the spleen and head kidney, while lipopolysaccharide upregulated detectable levels of IL-1β in the spleen only. Largemouth bass, challenged with Nocardia seriolae (1.0 × 106 cfu/mL, showed a significant increase in IL-1β at 3 and 5 days post infection (dpi in the spleen, while in the head kidney significant expression was found at 2 and 3 dpi, peaking at 3 dpi. Furthermore, tumor necrosis factor α (TNF-α showed significantly higher expression in the spleen at 3 and 5 dpi, and in the head kidney at 1 and 3 dpi, with expression decreasing at 5 dpi in both tissues.

  8. Identification, Molecular Cloning of IL-1β and Its Expression Profile during Nocardia seriolae Infection in Largemouth Bass, Micropterus salmoides.

    Science.gov (United States)

    Ho, Ping-Yueh; Byadgi, Omkar; Wang, Pei-Chyi; Tsai, Ming-An; Liaw, Li-Ling; Chen, Shih-Chu

    2016-10-01

    In the present study, IL-1β cDNA was identified and analyzed from largemouth bass (Micropterus salmoides). Full length IL-1β mRNA was obtained using Rapid Amplification of cDNA Ends (RACE), which contains 78 bp 3'-UTR, a 455 bp 5'-UTR, and an open reading frame (ORF) of 702 bp coding for 233 amino acid residues. The molecular weight and theoretical isoelectric point of largemouth bass IL-1β protein was predicted to be 26.7 kDa and 6.08 respectively. A largemouth bass IL-1β phylogenetic analysis showed a close relation to the IL-1βs of striped trumpeter (Latris lineata), Chinese perch (Siniperca chuatsi), and Japanese sea bass (Lateolabrax japonicus). Peptidoglycan upregulated IL-1β in the spleen and head kidney, while lipopolysaccharide upregulated detectable levels of IL-1β in the spleen only. Largemouth bass, challenged with Nocardia seriolae (1.0 × 10⁶ cfu/mL), showed a significant increase in IL-1β at 3 and 5 days post infection (dpi) in the spleen, while in the head kidney significant expression was found at 2 and 3 dpi, peaking at 3 dpi. Furthermore, tumor necrosis factor α (TNF-α) showed significantly higher expression in the spleen at 3 and 5 dpi, and in the head kidney at 1 and 3 dpi, with expression decreasing at 5 dpi in both tissues.

  9. Occurrence of acanthocephalans in largemouth bass and smallmouth bass (Centrarchidae) from Gull Lake, Michigan.

    Science.gov (United States)

    Muzzall, Patrick M; Gillilland, Merritt G

    2004-06-01

    A total of 65 largemouth bass, Micropterus salmoides, and 27 smallmouth bass, M. dolomieu, collected in April-September 2000 and April-July 2001 from Gull Lake, Michigan, were examined for acanthocephalans. Leptorhynchoides thecatus and Neoechinorhynchus cylindratus infected all the bass examined. Leptorhynchoides thecatus had the highest mean intensity (258.2 +/- 185.4 in 2000 and 145.0 +/- 61.0 in 2001) of the species infecting smallmouth bass. Although N. cylindratus had higher mean intensities (42.1 +/- 37.9 in 2000 and 68.9 +/- 70.5 in 2001) than did L. thecatus in largemouth bass, the values were not significantly different between bass species. The prevalence, mean intensity, and mean abundance of Pomphorhynchus bulbocolli in the bass species were below the values for the other acanthocephalan species. Leptorhynchoides thecatus and N. cylindratus are the most abundant intestinal helminths in bass from Gull Lake.

  10. Climate Ready Estuaries

    Science.gov (United States)

    Information on climate change impacts to different estuary regions, tools and resources to monitor changes, and information to help managers develop adaptation plans for risk management of estuaries and coastal communities.

  11. Intersex fish : Endocrine disruption in smallmouth bass

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — Intersex and abnormal vitellogenin in smallmouth bass from portions of the Potomac watershed pose a threat to fish resources. This fact sheet summarizes studies that...

  12. Pinning of holographic sliding stripes

    Science.gov (United States)

    Jokela, Niko; Järvinen, Matti; Lippert, Matthew

    2017-11-01

    In a holographic probe-brane model exhibiting a spontaneously spatially modulated ground state, we introduce explicit sources of symmetry breaking in the form of ionic and antiferromagnetic lattices. For the first time in a holographic model, we demonstrate pinning, in which the translational Goldstone mode is lifted by the introduction of explicit sources of translational symmetry breaking. The numerically computed optical conductivity fits very well to a Drude-Lorentz model with a small residual metallicity, precisely matching analytic formulas for the DC conductivity. We also find an instability of the striped phase in the presence of a large-amplitude ionic lattice.

  13. Using copper sulfate on hybrid striped bass eggs to control fungus and increase survival

    Science.gov (United States)

    A major obstacle in fish hatcheries is the inevitable fungal growth on eggs. Copper sulfate (CuSO4) is commonly used for fungus control in channel catfish hatcheries that use troughs, but effectiveness on fish eggs hatched using different systems has only recently been investigated. Fish were spawn...

  14. Isolation of RNA striped bass Monrone saxatilis spermatozoa: Implications for teleost male fertility and beyond?

    Science.gov (United States)

    Vertebrate sperm has been shown to provide more than paternal genomic material to the oocyte. For example, specific transcripts have been identified in bull sperm associated with fertility and with motility in boar sperm. Very little is currently known about functional, residual RNA in spermatozoa a...

  15. Isolation of RNA from striped bass (Morone saxatilis) spermatozoa: implications for teleost male fertility and beyond?

    Science.gov (United States)

    Vertebrate sperm has been shown to provide more than paternal genomic material to the oocyte. For example, specific transcripts have been identified in bull sperm associated with fertility and with motility in boar sperm. Very little is currently known about functional, residual RNA in spermatozoa a...

  16. Learning Lessons from Estuaries

    Science.gov (United States)

    Schnittka, Christine

    2006-01-01

    There is something that draws all people to the sea and especially to the fertile estuaries that nuzzle up to its shores. An estuary serves as both a nursery and a grave for sea creatures. If life evolved from some primordial sea, it may well have been an estuary--a place where ocean and rivers meet and fresh and salty waters mingle in the…

  17. The Mtata River estuary

    African Journals Online (AJOL)

    1989-02-28

    Feb 28, 1989 ... A survey of the fish fauna of Transkei estuaries. Part Three: The Mtata River estuary. E.E. Plumstead* and J.F. Prinsloo. Department of Zoology, University of Transkei, Private Bag X1 001, Unitra, Umtata, Republic of Transkei. H.J. Schoonbee. Department of Zoology, Rand Afrikaans University, P.O. Box 524, ...

  18. The Hudson River estuary

    National Research Council Canada - National Science Library

    Levinton, J.S; Waldman, J.R

    2006-01-01

    ... emphasis on important issues specific to the Hudson, such as the effect of power plants and high concentrations of PCBs. The chapters are written by specialists at a level that is accessible to students, teachers, and the interested layperson. The Hudson River Estuary is a unique scientifi c biography of a major estuary, with relevance to the s...

  19. White bass Morone chrysops is less susceptible than its hybrid to experimental infection with Flavobacterium columnare.

    Science.gov (United States)

    Fuller, S Adam; Farmer, Bradley D; Beck, Benjamin H

    2014-04-23

    Hybrid striped bass (HSB) and white bass (WB) were evaluated for their susceptibility to Flavobacterium columnare, the causative agent of columnaris disease, in 3 fundamental studies. In the first experiment, we determined whether columnaris disease could be developed by experimental challenge in HSB. This challenge consisted of 3 levels of F. columnare (10, 30, and 60 ml volumes) determined to be 2.25 × 10(7), 6.75 × 10(7), and 1.35 × 10(8) CFU ml(-1), respectively. Each treatment group exhibited significantly different survival rates: 0, 3.3, and 13.3% in the 60, 30, and 10 ml groups, respectively. In Expt 2, using the 30 ml dose, both HSB and WB had a 0% survival rate, with WB taking significantly longer to reach 100% mortality. In Expt 3, using the 10 ml dose, no HSB survived, whereas 33% of WB survived (p mortality observed in HSB; in contrast, WB gills showed noticeably less damage. From these series of experiments, it is clear that HSB are more sensitive to F. columnare, having lower survival and more extensive histological damage compared to WB following challenge.

  20. substitution line for resistance to stripe rust

    Indian Academy of Sciences (India)

    2011-08-19

    2D) substitution line for resistance to stripe rust. MENGPING LEI, GUANGRONG LI, SUFEN ZHANG, CHENG LIU and ZUJUN YANG. ∗. School of Life Science and Technology, University of Electronic Science and Technology ...

  1. Comparison of highway striping materials : installation report.

    Science.gov (United States)

    1980-01-01

    This study has been undertaken to investigate problems relating to the durability of highway striping materials used by the Department The research is limited to an evaluation of the durability and retroreflectance characteristics of selected paints,...

  2. Movement behaviour of alien largemouth bass Micropterus ...

    African Journals Online (AJOL)

    The movement behaviour of largemouth bass Micropterus salmoides in the estuarine headwater region of the Kowie River, South Africa, was investigated using passive acoustic telemetry. Ten adult fish were tagged and released in four discrete pools below a weir that precluded possible upriver migration. Their residency ...

  3. Influence of largemouth bass, Micropterus salmoides , on ...

    African Journals Online (AJOL)

    Predatory alien fishes have been widely introduced into streams in the Cape Floristic Region (CFR), South Africa, but little is known about their effect on native fishes. Results from this 2006 study suggest that the presence of alien predatory largemouth bass, Micropterus salmoides, may have influenced abundance and ...

  4. Penobscot Estuary (Maine) Monitoring

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NOAA's NEFSC collects fisheries data from the Penobscot Estuary using several types of fishing gear. The data is used to determine species presence, relative...

  5. Ambient and potential denitrification rates in marsh soils of Northeast Creek and Bass Harbor Marsh watersheds, Mount Desert Island, Maine

    Science.gov (United States)

    Huntington, Thomas G.; Culbertson, Charles W.; Duff, John H.

    2012-01-01

    Nutrient enrichment from atmospheric deposition, agricultural activities, wildlife, and domestic sources is a concern at Acadia National Park on Mount Desert Island, Maine, because of the potential problems of degradation of water quality and eutrophication in estuaries. Degradation of water quality has been observed at Bass Harbor Marsh estuary in the park but only minimally in Northeast Creek estuary. Previous studies at Acadia National Park have estimated nutrient inputs to estuaries from atmospheric deposition and surface-water runoff, and have identified shallow groundwater as an additional potential source of nutrients. Previous studies at Acadia National Park have assumed that a certain fraction of the nitrogen input was removed through microbial denitrification, but rates of denitrification (natural or maximum potential) in marsh soils have not been determined. The U.S. Geological Survey, in cooperation with Acadia National Park, measured in-place denitrification rates in marsh soils in Northeast Creek and in Bass Harbor Marsh watersheds during summer 2008 and summer 2009. Denitrification was measured under ambient conditions as well as after additions of inorganic nitrogen and glucose. In-place denitrification rates under ambient conditions were similar to those reported for other coastal wetlands, although they were generally lower than those reported for salt marshes having high ambient concentrations of nitrate (NO3). Denitrification rates generally increased by at least an order of magnitude following NO3 additions, with or without glucose (as the carbohydrate) additions, compared with the ambient treatments that received no nutrient additions. The treatment that added both glucose and NO3 resulted in a variety of denitrification responses when compared with the addition of NO3 alone. In most cases, the addition of glucose to a given rate of NO3 addition resulted in higher rates of denitrification. These variable responses indicate that the amount of

  6. Guiding thermomagnetic avalanches with soft magnetic stripes

    Energy Technology Data Exchange (ETDEWEB)

    Vlasko-Vlasov, V. K.; Colauto, F.; Benseman, T.; Rosenmann, D.; Kwok, W. -K.

    2017-12-01

    We demonstrate the potential for manipulating the ultrafast dynamics of thermomagnetic flux avalanches (TMA) in superconducting films with soft magnetic stripes deposited on the film. By tuning the in-plane magnetization of the stripes, we induce lines of strong magnetic potentials for Abrikosov vortices, resulting in guided slow motion of vortices along the stripe edges and preferential bursts of TMA along the stripes. Furthermore, we show that transversely polarized stripes can reduce the TMA size by diverting magnetic flux away from the major trunk of the TMA into interstripe gaps. Our data indicate that TMAs are launched from locations with enhanced vortex entry barrier, where flux accumulation followed by accelerated vortex discharge significantly reduces the threshold of the applied field ramping speed required for the creation of TMAs. Finally, vortex-antivortex annihilation at the moving front of an expanding TMA can account for the enhanced TMA activity in the receding branches of the sample's magnetization cycle and the preferred propagation of TMAs into maximum trapped flux regions.

  7. Guiding thermomagnetic avalanches with soft magnetic stripes

    Science.gov (United States)

    Vlasko-Vlasov, V. K.; Colauto, F.; Benseman, T.; Rosenmann, D.; Kwok, W.-K.

    2017-12-01

    We demonstrate the potential for manipulating the ultrafast dynamics of thermomagnetic flux avalanches (TMA) in superconducting films with soft magnetic stripes deposited on the film. By tuning the in-plane magnetization of the stripes, we induce lines of strong magnetic potentials for Abrikosov vortices, resulting in guided slow motion of vortices along the stripe edges and preferential bursts of TMA along the stripes. Furthermore, we show that transversely polarized stripes can reduce the TMA size by diverting magnetic flux away from the major trunk of the TMA into interstripe gaps. Our data indicate that TMAs are launched from locations with enhanced vortex entry barrier, where flux accumulation followed by accelerated vortex discharge significantly reduces the threshold of the applied field ramping speed required for the creation of TMAs. Finally, vortex-antivortex annihilation at the moving front of an expanding TMA can account for the enhanced TMA activity in the receding branches of the sample's magnetization cycle and the preferred propagation of TMAs into maximum trapped flux regions.

  8. Climate Ready Estuaries Progress Reports

    Science.gov (United States)

    Climate Ready Estuaries has supported adaptation activities in National Estuary Programs since 2008. In 2012, the program partnered with 23 NEPs, completed a pilot project with water utilities, and held workshops. Download annual reports from 2009-2012.

  9. The IAC stripe82 legacy project

    Science.gov (United States)

    Román, Javier; Fliri, Juergen; Trujillo, Ignacio

    2017-03-01

    We present new deep co-adds of data taken within Stripe 82 of the Sloan Digital Sky Survey (SDSS), especially stacked to reach the faintest surface brightness limits of this data set. Our reduction puts special emphasis on preserving the characteristics of the background (sky + diffuse light) in the input images using a non-aggressive sky subtraction strategy, resulting in an exquisite quality on extremely faint structures. The IAC Stripe 82 co-adds offer a rather unique possibility to study the low surface brightness Universe like stellar haloes and disc truncations, low surface brightness, tidal galactic interactions, extremely faint dwarf galaxies, intra-cluster light or diffuse light from galactic dust. The imaging data is publicly available at http://www.iac.es/proyecto/stripe82/.

  10. Rumble in the Jungle: City, Place and Uncanny Bass

    OpenAIRE

    Chris Christodoulou

    2011-01-01

    While bass powerfully resonates among the cultural discourses, lexicology and\\ud marketing of a range of electronic dance music (EDM) styles, little popular music\\ud scholarship has paid attention to the subjective, phenomenological and psychophysiological\\ud significance of bass in its modulation of intense feelings of pleasure.\\ud This article examines the linking in jungle/drum ‘n’ bass culture of bass as a sonic space\\ud that produces a powerful sense of jouissance where identity can seem...

  11. Audiogram of a striped dolphin (Stenella coeruleoalba)

    NARCIS (Netherlands)

    Kastelein, R.A.; Hagedoorn, M.; Au, W.W.L.; Haan, de D.

    2003-01-01

    The underwater hearing sensitivity of a striped dolphin was measured in a pool using standard psycho-acoustic techniques. The go/no-go response paradigm and up¿down staircase psychometric method were used. Auditory sensitivity was measured by using 12 narrow-band frequency-modulated signals having

  12. Breakup Behavior of a Capillary Bridge on a Hydrophobic Stripe Separating Two Hydrophilic Stripes

    Science.gov (United States)

    Hartmann, Maximilian; Hardt, Steffen

    2017-11-01

    The breakup dynamics of a capillary bridge on a hydrophobic area between two liquid filaments occupying two parallel hydrophilic stripes is studied experimentally. In addition calculations with the finite-element software Surface Evolver are performed to obtain the corresponding stable minimal surfaces. Droplets of de-ionized water are placed on substrates with alternating hydrophilic and hydrophobic stripes of different width. Their volume decreases by evaporation. This results in a droplet shaped as the letter ``H'' covering two hydrophilic stripes separated by one hydrophobic stripe. The width of the capillary bridge d(t) on the hydrophobic stripe during the breakup process is observed using a high-speed camera mounted on a bright-field microscope. The results of the experiments and the numerical studies show that the critical width dcrit, indicating the point where the capillary bridge becomes unstable, mainly depends on the width ratio of the hydrophilic and hydrophobic stripes. It is found that the time derivative of d(t) first decreases after dcrit has been reached. The final breakup dynamics then follows a t 2 / 3 scaling. We kindly acknowledge the financial support by the German Research Foundation (DFG) within the Collaborative Research Centre 1194 ``Interaction of Transport and Wetting Processes'', Project A02a.

  13. The importance of bass clarity in pop and rock venues

    DEFF Research Database (Denmark)

    Adelman-Larsen, Niels Werner; Thompson, Eric Robert

    2008-01-01

    High levels of bass sound have been shown to stimulate the part of the brain that controls such basic instincts as sexual desire and hunger [Todd, 2000]. In rock and pop music, the bass frequencies from 40-125 Hz get amplified to very loud levels. Easily half of the electrical power of the PA...... with audio engineers and bass players give the perspective that artificial reverberation is rarely, if ever, added to bass-frequencies. This supports the idea that a hall should be as dry as possible at low-frequencies. In the mid-treble frequency range, sound absorption, and thereby 'clarity', is easily...... obtained through the presence of the audience that absorbs 4-6 times more mid/high frequency sound energy than bass sound energy. In the low-frequency range 'clarity' is not so easily obtained. This paper discusses the challenge in depth and proposes design solutions....

  14. Latitudinal gradients in growth and spawning of sea bass, Dicentrarchus labrax, and their relationship with temperature and photoperiod

    Science.gov (United States)

    Vinagre, C.; Ferreira, T.; Matos, L.; Costa, M. J.; Cabral, H. N.

    2009-02-01

    0-group Sea bass, Dicentrarchus labrax, were captured in four estuarine nursery areas along the Portuguese coast, during the spring and summer of 2005. This coast has a North-South orientation which means that it is particularly suited for the investigation of latitudinal trends. Growth and hatch dates were estimated through otolith daily increment analysis. A clear latitudinal gradient in growth rates was detected. D. labrax mean growth rates were 0.48 mm d -1, 0.51 mm d -1, 0.56 mm d -1 and 0.61 mm d -1, from the Ria de Aveiro, the Mondego estuary, the Tagus estuary and the Mira estuary, respectively. A latitudinal gradient also existed in the spawning season of this species, particularly concerning its onset, which occurred earlier in the South. Analysis of sea surface temperature data from the adjacent coastal waters showed that spawning is not triggered by an increase in temperature, as has been argued in other coastal areas at higher latitudes. Photoperiod played a crucial role in the determination of spawning season at the Portuguese coast latitudinal range. The impact of future climate change on the observed patterns is also discussed.

  15. Charge stripe structure in FeTe

    Energy Technology Data Exchange (ETDEWEB)

    Kawashima, Y., E-mail: yukik@eng.hokudai.ac.jp [Department of Applied Physics, Hokkaido University, Sapporo 060-8628 (Japan); Ichimura, K. [Department of Applied Physics, Hokkaido University, Sapporo 060-8628 (Japan); Center of Education and Research for Topological Science and Technology, Hokkaido University, Sapporo 060-8628 (Japan); Ishioka, J. [Department of Applied Physics, Hokkaido University, Sapporo 060-8628 (Japan); Kurosawa, T. [Department of Physics, Hokkaido University, Sapporo 060-0810 (Japan); Oda, M. [Center of Education and Research for Topological Science and Technology, Hokkaido University, Sapporo 060-8628 (Japan); Department of Physics, Hokkaido University, Sapporo 060-0810 (Japan); Yamaya, K. [Department of Applied Physics, Hokkaido University, Sapporo 060-8628 (Japan); Tanda, S. [Department of Applied Physics, Hokkaido University, Sapporo 060-8628 (Japan); Center of Education and Research for Topological Science and Technology, Hokkaido University, Sapporo 060-8628 (Japan)

    2012-06-01

    We report the STM study on a single-crystalline sample of FeTe at 7.8 K. FeTe is one of the iron-based superconductor. We measured the resistivity and the magnetization of FeTe. FeTe shows SDW transition at 58 K on these measurements. We study the electronic state of FeTe by using STM/STS for observing FeTe from a microscopic viewpoint. We observed the iron layer and the tellurium layer with atomic resolution. Moreover, we discover the charge stripe structure on STM/STS measurement. We find the charge stripe structure is caused by iron atoms from the analysis. The gap structure of 9 meV was observed in tunneling spectra. This gap size is consistent with the SDW gap which is expected from mean field theory with T{sub N}=58 K.

  16. Geysers from the Tiger Stripes of Enceladus

    Science.gov (United States)

    Kohler, Susanna

    2015-10-01

    Enceladus, the sixth-largest moon of Saturn, is a cold, icy world but its also remarkably active. Recent studies have charted over a hundred geysers venting gas and dust into space from Enceladus south polar region. New research addresses the question of how the moons extreme surface terrain influences the locations and behavior of these geysers.Active PlumesEnceladus orbiting within Saturns E ring. Enceladus plumes probably created this ring. [NASA/JPL/Space Science Institute]A decade ago, scientists discovered that Enceladus south polar region is home to a prominent set of four fractures known as the tiger stripes. This region was found to contain roughly 100 geyser jets, which form plumes of gas and dust venting into space at a combined rate of ~200 kilograms per second! These plumes are probably the source of the material in Saturns E ring, in which Enceladus orbits.Recently, Carolyn Porco (UC Berkeley and CICLOPS Space Science Institute) led a study that analyzed 6.5 years of Cassini data, surveying the locations and orientations of 101 geysers. The outcome was peculiar: the geysers are distributed along the tiger stripes, but their directions are not all pointing vertically from the surface (see the video below!).Now, Paul Helfenstein (Cornell University) has teamed up with Porco to examine whether the surface terrain surrounding the geysers affects where the jets erupt, what direction they point, and even when theyre active.Surface InfluenceHelfenstein and Porco demonstrate that the locations and behavior of the geysers are very likely influenced by Enceladus surface features in this region. In particular, they find:The spacing of the geyser jets on Enceladus is not random.The jets are roughly uniformly distributed along the three most active tiger stripes, spaced about 5 kilometers apart. This fixed spacing might be due to shear fractures produced by fault motion along the tiger stripes cutting across the stripes at regular intervals and providing

  17. Filarial dermatitis in a striped skunk.

    Science.gov (United States)

    Saito, E K; Little, S E

    1997-10-01

    A striped skunk (Mephitis mephitis) from Kansas (USA) with severe diffuse dermatitis characterized by extensive alopecic areas, thickened skin, and multiple, scattered cutaneous abscesses on the dorsal aspect of the head, neck, and trunk was submitted for diagnostic evaluation. More than 50 nematodes identified as Filaria taxideae were found in the dorsal subcutaneous tissue. Histologic examination of the skin revealed multifocal pyogranulomatous inflammation with intralesional larvated nematode eggs, moderate orthokeratotic hyperkeratosis, and mild acanthosis. The lesions resemble those reported from badgers (Taxidea taxus) and a lesser panda (Ailurus fulgens) with dermatitis caused by Filaria taxideae. Although F. taxideae has been previously collected from skunks, this is the first report of filarid dermatitis caused by this nematode in a striped skunk.

  18. Classifying Variable Sources in SDSS Stripe 82

    Science.gov (United States)

    Willecke Lindberg, Christina

    2018-01-01

    SDSS (Sloan Digital Sky Survey) Stripe 82 is a well-documented and researched region of the sky that does not have all of its ~67,500 variable objects labeled. By collecting data and consulting different catalogs such as the Catalina Survey, we are able to slowly cross-match more objects and add classifications within the Stripe 82 catalog. Such matching is performed either by pairing SDSS identification numbers, or by converting and comparing the coordinates of every object within the Stripe 82 catalog to every object within the classified catalog, such as the Catalina Survey catalog. If matching is performed with converted coordinates, a follow-up check is performed to ascertain that the magnitudes of the paired objects are within a reasonable margin of error and that objects have not been mismatched. Once matches have been confirmed, the light curves of classified objects can then be used to determine features that most effectively separate the different types of variable objects in feature spaces. By classifying variable objects, we can construct a reference for subsequent large research surveys, such as LSST (the Large Synoptic Survey Telescope), that could utilize SDSS data as a training set for its own classifications.

  19. 3D face recognition using isogeodesic stripes.

    Science.gov (United States)

    Berretti, Stefano; Del Bimbo, Alberto; Pala, Pietro

    2010-12-01

    In this paper, we present a novel approach to 3D face matching that shows high effectiveness in distinguishing facial differences between distinct individuals from differences induced by nonneutral expressions within the same individual. The approach takes into account geometrical information of the 3D face and encodes the relevant information into a compact representation in the form of a graph. Nodes of the graph represent equal width isogeodesic facial stripes. Arcs between pairs of nodes are labeled with descriptors, referred to as 3D Weighted Walkthroughs (3DWWs), that capture the mutual relative spatial displacement between all the pairs of points of the corresponding stripes. Face partitioning into isogeodesic stripes and 3DWWs together provide an approximate representation of local morphology of faces that exhibits smooth variations for changes induced by facial expressions. The graph-based representation permits very efficient matching for face recognition and is also suited to being employed for face identification in very large data sets with the support of appropriate index structures. The method obtained the best ranking at the SHREC 2008 contest for 3D face recognition. We present an extensive comparative evaluation of the performance with the FRGC v2.0 data set and the SHREC08 data set.

  20. Capillary instability on a hydrophilic stripe

    Science.gov (United States)

    Speth, Raymond L.; Lauga, Eric

    2009-07-01

    A recent experiment showed that cylindrical segments of water filling a hydrophilic stripe on an otherwise hydrophobic surface display a capillary instability when their volume is increased beyond the critical volume at which their apparent contact angle on the surface reaches 90° (Gau et al 1999 Science 283 46-9). Surprisingly, the fluid segments did not break up into droplets—as would be expected for a classical Rayleigh-Plateau instability—but instead displayed a long-wavelength instability where all excess fluid gathered in a single bulge along each stripe. We consider here the dynamics of the flow instability associated with this setup. We perform a linear stability analysis of the capillary flow problem in the inviscid limit. We first confirm previous work showing that all cylindrical segments are linearly unstable if (and only if) their apparent contact angle is larger than 90°. We then demonstrate that the most unstable wavenumber for the surface perturbation decreases to zero as the apparent contact angle of the fluid on the surface approaches 90°, allowing us to re-interpret the creation of bulges in the experiment as a zero-wavenumber capillary instability. A variation of the stability calculation is also considered for the case of a hydrophilic stripe located on a wedge-like geometry.

  1. Capillary instability on a hydrophilic stripe

    Energy Technology Data Exchange (ETDEWEB)

    Speth, Raymond L [Department of Mechanical Engineering, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, MA 02139 (United States); Lauga, Eric [Department of Mechanical and Aerospace Engineering, University of California, San Diego, 9500 Gilman Dr, La Jolla, CA 92093-0411 (United States)], E-mail: elauga@ucsd.edu

    2009-07-15

    A recent experiment showed that cylindrical segments of water filling a hydrophilic stripe on an otherwise hydrophobic surface display a capillary instability when their volume is increased beyond the critical volume at which their apparent contact angle on the surface reaches 90 deg. (Gau et al 1999 Science 283 46-9). Surprisingly, the fluid segments did not break up into droplets-as would be expected for a classical Rayleigh-Plateau instability-but instead displayed a long-wavelength instability where all excess fluid gathered in a single bulge along each stripe. We consider here the dynamics of the flow instability associated with this setup. We perform a linear stability analysis of the capillary flow problem in the inviscid limit. We first confirm previous work showing that all cylindrical segments are linearly unstable if (and only if) their apparent contact angle is larger than 90 deg. We then demonstrate that the most unstable wavenumber for the surface perturbation decreases to zero as the apparent contact angle of the fluid on the surface approaches 90 deg, allowing us to re-interpret the creation of bulges in the experiment as a zero-wavenumber capillary instability. A variation of the stability calculation is also considered for the case of a hydrophilic stripe located on a wedge-like geometry.

  2. Assessment of endocrine disruption in Smallmouth bass (Micropterus dolomieu) and largemouth bass (Micropterus salmoides) in the Potomac River Watershed

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — Intersex, specifically testicular oocytes, has been observed in male smallmouth bass (SMB) and other centrarchids in the South Branch of the Potomac River and forks...

  3. Mapping of stripe rust resistance gene in an Aegilops caudata ...

    Indian Academy of Sciences (India)

    PUNEET INDER TOOR

    Abstract. A pair of stripe rust and leaf rust resistance genes was introgressed from Aegilops caudata, a nonprogenitor diploid species with the CC genome, to cultivated wheat. Inheritance and genetic mapping of stripe rust resistance gene in backcross- recombinant inbred line (BC-RIL) population derived from the cross of a ...

  4. Mapping of stripe rust resistance gene in an Aegilops caudata ...

    Indian Academy of Sciences (India)

    Inheritance and genetic mapping of stripe rust resistance gene in backcrossrecombinant inbred line (BC-RIL) population derived from the cross of a wheat–Ae. caudata introgression line (IL) T291-2(pau16060) with wheat cv. PBW343 is reported here. Segregation of BC-RILs for stripe rust resistance depicted a single major ...

  5. Transfer of stripe rust resistance from Aegilops variabilis to bread ...

    African Journals Online (AJOL)

    In terms of area, the bread wheat producing regions of China comprise the largest area in the world that is constantly threatened by stripe rust epidemics. Consequently, it is important to exploit new adultplant resistance genes in breeding. This study reports the transfer of stripe rust resistance from Aegilops variabilis to ...

  6. Feeding ecology of age-o smallmouth bass in the New River, West Virginia

    OpenAIRE

    Easton, Robert S.

    1992-01-01

    The purpose of this study was to determine the food habits of age-O smallmouth bass (Micropterus dolomieu Lac~p~de) in the New River and to examine spatial, temporal, and size-related differences in foraging success. Understanding factors that regulate foraging success of age-O smallmouth bass may provide further insight into factors regulating yearclass strength in smallmouth bass populations. Larval and juvenile smallmouth bass (8.5-85 mm Total Length; TL) were coll...

  7. FLORA OF MOLOCHNYI ESTUARY COASTS

    Directory of Open Access Journals (Sweden)

    Kolomiychuk V.P.

    2013-09-01

    Full Text Available Present-day characteristic of the coastal flora of Molochnyi eastury is given, that is one of the largest estuaries in Ukraine, the shores and waters of which in 2009 became a part of the Pryazov’ya National Nature Park. The analysis of the main parameters of the flora is made. Rare component of the estuary coastal flora is characterized, further steps to conserve the nature of Pryazov’ya are proposed.

  8. Survey of intersex largemouth bass from impoundments in Georgia USA

    Science.gov (United States)

    Kellock, Kristen A.; Trushel, Brittany E.; Ely, Patrick C.; Jennings, Cecil A.; Bringolf, Robert B.

    2015-01-01

    Intersex fish are increasingly being reported worldwide, primarily in rivers that receive treated wastewater, but few studies have investigated intersex in waters that do not receive wastewater. In a recent reconnaissance survey of intersex fish in North America, a high rate of intersex was reported for Largemouth Bass Micropterus salmoides in some southeastern U.S. rivers; however, the occurrence of intersex in impoundments has not been well described, especially on a statewide scale. Therefore, our objective for this project was to survey the occurrence of intersex Largemouth Bass in a variety of impoundment habitats across Georgia. Largemouth Bass were collected from 11 impoundments without direct municipal or agricultural wastewater inputs. Gonads from all male Largemouth Bass were evaluated for the incidence and severity of the intersex condition based on presence and arrangement of testicular oocytes. Overall 48% of male Largemouth Bass collected from impoundments were intersex, which was found in 9 of the 11 impoundments. Among impoundments, incidence of intersex ranged from 0 to 82% of the males sampled and surface area of the impoundment was a significant predictor of intersex incidence. Intersex fish were smaller than normal males, but population-level effects of intersex and causative factors of endocrine disruption in the impoundments remain unknown. The high incidence of intersex males in small impoundments demonstrates that the condition is not confined to rivers and suggests that factors other than those previously associated with intersex (i.e., municipal wastewater) may be involved.

  9. Negative permittivity in bubble and stripe phases

    Science.gov (United States)

    Friess, B.; Peng, Y.; Rosenow, B.; von Oppen, F.; Umansky, V.; von Klitzing, K.; Smet, J. H.

    2017-11-01

    The physics of itinerant electrons in condensed matter is by and large governed by repulsive Coulomb forces. However, attractive interactions may emerge and prevail in determining the ground state despite the pervasive Coulomb repulsion. A notable example is electron pairing and superconductivity. The interplay of attractive and repulsive interactions may also instigate spontaneous symmetry lowering and clustering of charges in geometric patterns even without net attraction. Both types of attractive interaction triggered physics--pairing and charge ordering--are at play in two-dimensional electron systems exposed to a quantizing magnetic field. The charge ordering has been concluded indirectly from transport behaviour. Here we report the observation of negative permittivity present solely when bubble and stripe phases form. In conjunction with a theoretical model, the negative permittivity provides evidence for the underlying attractive exchange-correlation energy which sufficiently countervails Coulomb repulsion at small distances to enable and mediate charge clustering.

  10. Rotational Electrophoresis of Striped Metallic Microrods

    Energy Technology Data Exchange (ETDEWEB)

    Rose, K A; Meier, J A; Dougherty, G M; Santiago, J G

    2005-11-28

    Analytical models are developed for the translation and rotation of metallic rods in a uniform electric field. The limits of thin and thick electric double layers are considered. These models include the effect of stripes of different metals along the length of the particle. Modeling results are compared to experimental measurements for metallic rods. Experiments demonstrate the increased alignment of particles with increasing field strength and the increase in degree of alignment of thin versus thick electric double layers. The metal rods polarize in the applied field and align parallel to its direction due to torques on the polarized charge. The torque due to polarization has a second order dependence on the electric field strength. The particles are also shown to have an additional alignment torque component due to non-uniform densities along their length. The orientation distributions of dilute suspensions of particles are also shown to agree well with results predicted by a rotational convective-diffusion equation.

  11. Dissipation of the striped pulsar wind

    Science.gov (United States)

    Cerutti, B.; Philippov, A. A.

    2017-11-01

    Context. Rapidly rotating neutron stars blow a relativistic, magnetized wind mainly composed of electron-positron pairs. The free expansion of the wind terminates far from the neutron star where a weakly magnetized pulsar wind nebula forms, implying efficient magnetic dissipation somewhere upstream. Aims: The wind current sheet that separates the two magnetic polarities is usually considered as the most natural place for magnetic dissipation via relativistic reconnection, but its efficiency remains an open question. Here, the goal of this work is to revisit this issue in light of the most recent progress in the understanding of reconnection and pulsar electrodynamics. Methods: We perform large two-dimensional particle-in-cell simulations of the oblique rotator to capture the multi-scale evolution of the wind. Our simulations are limited to the equatorial plane. Results: We find that the current sheet breaks up into a dynamical chain of magnetic islands separated by secondary thin current sheets. The sheet thickness increases linearly with radius while the Poynting flux decreases monotonically as reconnection proceeds. The radius of complete annihilation of the stripes is given by the plasma multiplicity parameter at the light cylinder. Current starvation within the sheets does not occur before complete dissipation as long as there is enough charges where the sheets form. Particles are efficiently heated up to a characteristic energy set by the magnetization parameter at the light cylinder. Energetic pulsed synchrotron emission peaks close to the light cylinder, and presents sub-pulse variability associated with the formation of plasmoids in the sheet. Conclusions: This study suggests that the striped component of the wind dissipates far before reaching the termination shock in isolated pulsars, even in very-high-multiplicity systems such as the Crab pulsar. Pulsars in binary systems may provide the best environments to study magnetic dissipation in the wind.

  12. Estuary-wide genetic stock distribution and salmon habitat use, tidal-fluvial estuary - Columbia River Estuary Tidal Habitats

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The goal of the tidal-fluvial estuary study is to determine the estuary's contribution to the spatial structure and life history diversity of Columbia River salmon...

  13. Bass-SIR model for diffusion of new products

    CERN Document Server

    Fibich, Gadi

    2016-01-01

    We consider the diffusion of new products in social networks, where consumers who adopt the product can later "recover" and stop influencing others to adopt the product. We show that the diffusion is not described by the SIR model, but rather by a novel model, the Bass-SIR model, which combines the Bass model for diffusion of new products with the SIR model for epidemics. The phase transition of consumers from non-adopters to adopters is described by a non-standard Kolmogorov-Johnson-Mehl-Avrami model, in which clusters growth is limited by adopters' recovery. Therefore, diffusion in the Bass-SIR model only depends on the local structure of the social network, but not on the average distance between consumers. Consequently, unlike the SIR model, a small-worlds structure has a negligible effect on the diffusion. Surprisingly, diffusion on scale-free networks is nearly identical to that on Cartesian ones.

  14. The importance of the river-estuary interface (REI) zone in estuaries ...

    African Journals Online (AJOL)

    The effect of the REI zone on fish was examined in the freshwater-rich Great Fish Estuary and in the freshwater-deprived Kariega Estuary. Estuarine associated fishes responded strongly to river flow in the Great Fish Estuary but a number of these taxa were limited or absent from the Kariega Estuary. These findings are ...

  15. About the Climate Ready Estuaries Program

    Science.gov (United States)

    The Climate Ready Estuaries program is a partnership between EPA and the National Estuary Programs to address climate change in coastal areas. It has helped coastal communities prepare for climate change since 2008.

  16. Nutrients in some estuaries of Kerala

    Digital Repository Service at National Institute of Oceanography (India)

    Devi, K.S.; Venugopal, P.; Remani, K.N.; Zacharias, D.; Unnithan, R.V.

    Some environmental parameters and nutrients like inorganic phosphate, nitrate, nitrite and ammonia from four estuaries namely Kallai, Beypore, Korapuzha and Mahe along north Kerala Coast were studied for an year (1980-81). In all these estuaries...

  17. Barley stripe mosaic virus: Structure and relationship to the tobamoviruses

    Energy Technology Data Exchange (ETDEWEB)

    Kendall, Amy [Department of Biological Sciences and Center for Structural Biology, Vanderbilt University, Nashville, TN 37235 (United States); Williams, Dewight [Department of Molecular Physiology and Biophysics and Center for Structural Biology, Vanderbilt University, Nashville, TN 37232 (United States); Bian, Wen [Department of Biological Sciences and Center for Structural Biology, Vanderbilt University, Nashville, TN 37235 (United States); Stewart, Phoebe L. [Department of Molecular Physiology and Biophysics and Center for Structural Biology, Vanderbilt University, Nashville, TN 37232 (United States); Stubbs, Gerald, E-mail: gerald.stubbs@vanderbilt.edu [Department of Biological Sciences and Center for Structural Biology, Vanderbilt University, Nashville, TN 37235 (United States)

    2013-09-01

    Barley stripe mosaic virus (BSMV) is the type member of the genus Hordeivirus, rigid, rod-shaped viruses in the family Virgaviridae. We have used fiber diffraction and cryo-electron microscopy to determine the helical symmetry of BSMV to be 23.2 subunits per turn of the viral helix, and to obtain a low-resolution model of the virus by helical reconstruction methods. Features in the model support a structural relationship between the coat proteins of the hordeiviruses and the tobamoviruses. - Highlights: • We report a low-resolution structure of barley stripe mosaic virus. • Barley stripe mosaic virus has 23.2 subunits per turn of the viral helix. • We compare barley stripe mosaic virus with tobacco mosaic virus.

  18. Analysis of ATMS striping noise from its Earth scene observations

    Science.gov (United States)

    Qin, Zhengkun; Zou, Xiaolei; Weng, Fuzhong

    2013-12-01

    differences between brightness temperature observations and simulated observations based on numerical weather predictions, i.e., O-B, for Advanced Technology Microwave Sounder (ATMS) temperature sounding channels exhibit a clear striping pattern [Bormann et al., 2013]. We propose to first use the principal component analysis to isolate scan-dependent features such as the cross-track striping from the atmospheric signal and then to use an Ensemble Empirical Mode Decomposition (EEMD) to extract the striping noise in ATMS Earth scene brightness temperature observations for both temperature and water vapor sounding channels. It is shown that the Principal Component (PC) coefficient of the first PC mode, which mainly describes a scan-dependent feature of cross-track radiometer measurements, captures the striping noise. The EEMD is then applied to the PC coefficient to extract the first three high-frequency intrinsic mode functions (IMFs), which are denoted as the PC1/IMF3 noise. When the PC1/IMF3 noise is removed from the data, the striping noise is imperceptible in the global distribution of O-B for ATMS temperature sounding channels 1-16. Using the same method, it is demonstrated that the striping noise is also present in ATMS water vapor sounding channels 17-22. The magnitude of the ATMS striping noise is about ±0.3 K for the temperature sounding channels and ±1.0 K for the moisture sounding channels. The same technique is also applied to Advanced Microwave Sounding Unit-A (AMSU-A), AMSU-B, and Microwave Humidity Sounder (MHS). The striping noise is undetectable for AMSU-A but present in AMSU-B and MHS data.

  19. Integration of Bass Enhancement and Active Noise Control System in Automobile Cabin

    Directory of Open Access Journals (Sweden)

    Liang Wang

    2008-01-01

    Full Text Available With the advancement of digital signal processing technologies, consumers are more concerned with the quality of multimedia entertainment in automobiles. In order to meet this demand, an audio enhancement system is needed to improve bass reproduction and cancel engine noise in the cabins. This paper presents an integrated active noise control system that is based on frequency-sampling filters to track and extract the bass information from the audio signal, and a multifrequency active noise equalizer to tune the low-frequency engine harmonics to enhance the bass reproduction. In the noise cancellation mode, a maximum of 3 dB bass enhancement can be achieved with significant noise suppression, while higher bass enhancement can be achieved in the bass enhance mode. The results show that the proposed system is effective for solving both the bass audio reproduction and the noise control problems in automobile cabins.

  20. Species-specific impact of introduced largemouth bass Micropterus ...

    African Journals Online (AJOL)

    Largemouth bass Micropterus salmoides are among the world's 100 worst invaders and negatively affect aquatic biodiversity in many regions worldwide. In South Africa there is a paucity of empirical studies describing their impacts. The impact of M. salmoides on the fish community in the Groot Marico River catchment, ...

  1. Audiogram of a striped dolphin (Stenella coeruleoalba)

    Science.gov (United States)

    Kastelein, Ronald A.; Hagedoorn, Monique; Au, Whitlow W. L.; de Haan, Dick

    2003-02-01

    The underwater hearing sensitivity of a striped dolphin was measured in a pool using standard psycho-acoustic techniques. The go/no-go response paradigm and up-down staircase psychometric method were used. Auditory sensitivity was measured by using 12 narrow-band frequency-modulated signals having center frequencies between 0.5 and 160 kHz. The 50% detection threshold was determined for each frequency. The resulting audiogram for this animal was U-shaped, with hearing capabilities from 0.5 to 160 kHz (8 13 oct). Maximum sensitivity (42 dB re 1 μPa) occurred at 64 kHz. The range of most sensitive hearing (defined as the frequency range with sensitivities within 10 dB of maximum sensitivity) was from 29 to 123 kHz (approximately 2 oct). The animal's hearing became less sensitive below 32 kHz and above 120 kHz. Sensitivity decreased by about 8 dB per octave below 1 kHz and fell sharply at a rate of about 390 dB per octave above 140 kHz.

  2. The diet and consumption of dominant fish species in the upper Scheldt estuary, Belgium

    DEFF Research Database (Denmark)

    Maes, J.; De Brabandere, Loreto; Ollevier, F.

    2003-01-01

    the fish assemblage: two goby species, herring, sprat, bass, flounder, eel and pikeperch. Together, they had preyed upon 31 different prey taxa. Calanoid copepods and hyperbenthic mysids were the most important prey items with macrobenthic invertebrates being largely ignored. Pair-wise comparisons......Seasonal changes in the diet composition and trophic niche overlap were examined for the dominant members of the fish assemblage of the turbid low-salinity zone of the Scheldt estuary (Belgium). Samples of fish were taken in the cooling water of a power plant. Juveniles of eight species dominated...... of trophic niche overlap showed that, in general, niche overlap between individuals of the same species was significantly higher than overlap between individuals from different species, suggesting that the available food resources were partitioned. The total annual prey consumption by the dominant fish...

  3. The Effects of Normal Metal Stripes on TES Performance

    Science.gov (United States)

    Wakeham, Nick; Adams, J. S.; Bandler, S. R.; Chervenak, J. A.; Datesman, A. M.; Eckart, M. E.; Finkbeiner, F. M.; Kelley, R. L.; Kilbourne, C. A.; Miniussi, A. R.; hide

    2017-01-01

    Exploring the effects of size and geometry of normal metal features on the transition shapes and performance of transition-edge sensor microcalorimeters. The spectral resolution of transition-edge sensor (TES) microcalorimeters is very sensitive to the specific dependencies of the resistance R in the superconducting transition on the current I, magnetic field B, and temperature T. In particular, it has been shown that transitions that are very steep in (R,T) space lead to a significant noise term, in excess of conventional expectations. This so-called unexplained noise is known to be reduced by the addition of normal metal stripes across the TES perpendicular to the direction of current flow. These normal metal stripes have been shown to drastically alter the oscillatory patterns seen in measurements of the critical current as a function of magnetic field. However, there are many remaining questions about the exact impact of the stripes on current distributions within the TES, the Fraunhofer pattern and, therefore, the shape of the R(I, B, T) surface. Through measurements of the resistance under DC bias of TES devices of various sizes, with different stripe patterns and dimensions, we will discuss how these stripes can affect the R(I, B, T) surface. In addition, using measurements and analysis of the noise spectra of various devices we will present how these changes to the stripe pattern may affect the performance of the TES. In particular, we will discuss strategies to reduce the presence of localized discontinuities in the derivative of R, associated with increased noise, while maintaining the globally low levels of unexplained noise currently achieved with conventional metal stripe patterns. Implementing these strategies is a path towards producing large arrays with highly uniform transitions and high spectral resolution. These large uniform arrays will be required for future x-ray astronomy applications, such as the X-IFU on ATHENA.

  4. Bioenergetics models to estimate numbers of larval lampreys consumed by smallmouth bass in Elk Creek, Oregon

    Science.gov (United States)

    Schultz, Luke; Heck, Michael; Kowalski, Brandon M; Eagles-Smith, Collin A.; Coates, Kelly C.; Dunham, Jason

    2017-01-01

    Nonnative fishes have been increasingly implicated in the decline of native fishes in the Pacific Northwest. Smallmouth Bass Micropterus dolomieu were introduced into the Umpqua River in southwest Oregon in the early 1960s. The spread of Smallmouth Bass throughout the basin coincided with a decline in counts of upstream-migrating Pacific Lampreys Entosphenus tridentatus. This suggested the potential for ecological interactions between Smallmouth Bass and Pacific Lampreys, as well as freshwater-resident Western Brook Lampreys Lampetra richardsoni. To evaluate the potential effects of Smallmouth Bass on lampreys, we sampled diets of Smallmouth Bass and used bioenergetics models to estimate consumption of larval lampreys in a segment of Elk Creek, a tributary to the lower Umpqua River. We captured 303 unique Smallmouth Bass (mean: 197 mm and 136 g) via angling in July and September. We combined information on Smallmouth Bass diet and energy density with other variables (temperature, body size, growth, prey energy density) in a bioenergetics model to estimate consumption of larval lampreys. Larval lampreys were found in 6.2% of diet samples, and model estimates indicated that the Smallmouth Bass we captured consumed 925 larval lampreys in this 2-month study period. When extrapolated to a population estimate of Smallmouth Bass in this segment, we estimated 1,911 larval lampreys were consumed between July and September. Although the precision of these estimates was low, this magnitude of consumption suggests that Smallmouth Bass may negatively affect larval lamprey populations.

  5. Modelling Phytoplankton Dynamics in Estuaries

    NARCIS (Netherlands)

    Liu, B.

    2017-01-01

    In estuaries, which are the transition areas between rivers and coastal waters, the spatial and temporal distribution of phytoplankton cell number density (P) is determined by local specific growth and loss, advection by currents, mixing by turbulence, and sinking if the density of phytoplankton is

  6. from cross river estuary, nigeria

    African Journals Online (AJOL)

    U,F1,:1.,U_ rt as so. 75 $00 o 25 so 15 109 i. FIG. 3: VARIATION IN STOMACH FULLNESS OF PELLONULA Ieonesis FROM CROSS. RIVER ESTUARY, NIGERIA WITH SEXES, SIZES AND SEASONS. Results on ontogenetic diet composition shows that LSG ate more preyfishes and ants than. 886 while 886 ate ,more ...

  7. Simulated Sampling of Estuary Plankton

    Science.gov (United States)

    Fortner, Rosanne W.; Jenkins, Deborah Bainer

    2009-01-01

    To find out about the microscopic life in the valuable estuary environment, it is usually necessary to be near the water. This dry lab offers an alternative, using authentic data and a simulation of plankton sampling. From the types of organisms found in the sample, middle school students can infer relationships in the biological and physical…

  8. The Need for Definitions in Understanding Estuaries

    Science.gov (United States)

    Elliott, M.; McLusky, D. S.

    2002-12-01

    This paper considers what the definition/classification of estuaries has taught us and why there is a need for classification systems. It further considers why we need to define an estuary and its constituent parts, including the fundamental difficulty and dilemma of trying to define parts of a continuum, as a means to both understanding and managing that estuary. The review considers where an estuary starts and ends and the relative merits of defining estuaries in terms of their biology, physics, chemistry, geographic nature and socio-economic units. It briefly discusses the need for legal and planning definitions and the linkages between science and management. Following this, we present a generic framework for the definition, classification, monitoring, assessment, reporting and management of estuaries. In particular, it is argued that scientists should engage in the debate on the definition of estuaries for legal and socio-economic purposes. It is concluded here that as existing definitions will never be suitable for all needs, a different approach is required. The proposed ' Expert Judgement Checklist Approach ' could provide guidance for those needing to define/delimit an estuary while still acknowledging the inherent variability of such systems. The proposed system mostly relates to the European, temperate estuary, but there are lessons here for estuaries worldwide.

  9. Structural compliance, misfit strain and stripe nanostructures in cuprate superconductors

    Science.gov (United States)

    Duxbury, Phillip

    2002-03-01

    Structural compliance is the ability of a crystal structure to accommodate variations in local atomic bond-lengths without incurring large strain energies. Based on local pair distribution function(pdf) measurements, we show that the structural compliance of cuprates is relatively small. In addition the pdf measurements indicate the presence of short and long Cu-O-Cu bonds in doped cuprate layers. We propose that short, highly doped, Cu-O-Cu bonds in stripes are subject to a tensile misfit strain, and we develop a model to describe the effect of this misfit strain on charge ordering in the copper oxygen planes of oxide materials. The typical length of strain-induced short stripes will be presented along with some of the low energy stripe nanostructures that can result. (Preprint is at Cond-Mat: 0108338)

  10. Salmon habitat use, tidal-fluvial estuary - Columbia River Estuary Tidal Habitats

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The goal of the tidal-fluvial estuary study is to determine the estuary's contribution to the spatial structure and life history diversity of Columbia River salmon...

  11. In-stream PIT detection, estuary wetlands - Columbia River Estuary Tidal Habitats

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The goal of the tidal-fluvial estuary study is to determine the estuary's contribution to the spatial structure and life history diversity of Columbia River salmon...

  12. Observations on the status of bass Dicentrarchus Labrax stocks in Ireland in the late 1990s

    OpenAIRE

    Fahy, E.; Forrest, N.; Shaw, U.; Green, P.

    2000-01-01

    Investigative work was undertaken in 1996 to ascertain the strength of sea bass stocks following the introduction of a range of conservation measures which effectively extinguished the legitimate commercial fishery for the species. Information was sought from two sources: estimation of the age composition of the samples and the growth of bass by examining scales from exploited fish. An estimate of the density of juvenile pre-recruit bass was made from a seine net survey undertaken in various ...

  13. Roadway striping productivity data analysis for INDOT Greenfield and Crawfordsville districts.

    Science.gov (United States)

    2013-11-01

    The main objective of the SPR3650 project is to provide an accurate overview of striping operation so that INDOT finds a way to : effectively save significant investment for purchasing new striping trucks in near future without compromising roadwa...

  14. Stable multidimensional soliton stripes in two-component Bose-Einstein condensates

    Energy Technology Data Exchange (ETDEWEB)

    Brazhnyi, Valeriy A. [Centro de Fisica do Porto, Faculdade de Ciencias, Universidade do Porto, R. Campo Alegre 687, Porto 4169-007 (Portugal); Perez-Garcia, Victor M., E-mail: victor.perezgarcia@uclm.es [Departamento de Matematicas, E. T. S. de Ingenieros Industriales, and Instituto de Matematica Aplicada a la Ciencia y la Ingenieria, Universidad de Castilla-La Mancha, 13071 Ciudad Real (Spain)

    2011-06-15

    Highlights: > Soliton-stripes (multidimensional extensions of dark solitons) are constructed in multicomponent BECs. > A second component filling the core of the stripe leads to reduced instabilities while propagating in homogeneous media. > In the presence of a trap arbitrarily long-lived stripes can be constructed by increasing the core filling. - Abstract: We discuss how to construct stable multidimensional extensions of one-dimensional dark solitons, the so-called soliton stripes, in two-species Bose-Einstein condensates in the immiscible regime. We show how using a second component to fill the core of a dark soliton stripe leads to reduced instabilities while propagating in homogeneous media. We also discuss how in the presence of a trap arbitrarily long-lived dark soliton stripes can be constructed by increasing the filling of the dark stripe core. Numerical evidences of the robustness of the dark soliton stripes in collision scenarios are also provided.

  15. Nutrient characterisation of river inflow into the estuaries of the ...

    African Journals Online (AJOL)

    2014-10-02

    Oct 2, 2014 ... estuaries (POE), temporarily open/closed estuaries (TOCE), estuarine lakes ... estuaries where DWA has water quality monitoring data for the rivers that flow ...... relationship, but in this instance it could not be linked to point-.

  16. Les génériques de Saul Bass

    OpenAIRE

    Dupuis, Joachim Daniel

    2011-01-01

    Nous proposons ici de faire connaître la conception du générique de Saul Bass, reconnu à juste titre comme l’inventeur du générique moderne dans les années 1950 aux États-Unis et comme l’auteur de 60 génériques dont l’époustouflant Vertigo. Bien que la notion de geste ne soit jamais utilisée par Saul Bass, nous proposons de montrer qu’elle est à la source des opérations de pensée (symbole) et d’affect de chaque générique. La notion de geste permet de rompre tout autant avec la notion de symbo...

  17. Distinguishing Patterns of Charge Order: Stripes or Checkerboards

    Energy Technology Data Exchange (ETDEWEB)

    Robertson, J.A.

    2010-04-06

    In two dimensions, quenched disorder always rounds transitions involving the breaking of spatial symmetries so, in practice, it can often be difficult to infer what form the symmetry breaking would take in the 'ideal,' zero disorder limit. We discuss methods of data analysis which can be useful for making such inferences, and apply them to the problem of determining whether the preferred order in the cuprates is 'stripes' or 'checkerboards.' In many cases we show that the experiments clearly indicate stripe order, while in others (where the observed correlation length is short), the answer is presently uncertain.

  18. Spatiotemporal patterns and habitat associations of smallmouth bass (Micropterus dolomieu) invading salmon-rearing habitat

    Science.gov (United States)

    Lawrence, David J.; Olden, Julian D.; Torgersen, Christian E.

    2012-01-01

    1. Smallmouth bass (Micropterus dolomieu) have been widely introduced to fresh waters throughout the world to promote recreational fishing opportunities. In the Pacific Northwest (U.S.A.), upstream range expansions of predatory bass, especially into subyearling salmon-rearing grounds, are of increasing conservation concern, yet have received little scientific inquiry. Understanding the habitat characteristics that influence bass distribution and the timing and extent of bass and salmon overlap will facilitate the development of management strategies that mitigate potential ecological impacts of bass.2. We employed a spatially continuous sampling design to determine the extent of bass and subyearling Chinook salmon (Oncorhynchus tshawytscha) sympatry in the North Fork John Day River (NFJDR), a free-flowing river system in the Columbia River Basin that contains an upstream expanding population of non-native bass. Extensive (i.e. 53 km) surveys were conducted over 2 years and during an early and late summer period of each year, because these seasons provide a strong contrast in the river’s water temperature and flow condition. Classification and regression trees were applied to determine the primary habitat correlates of bass abundance at reach and channel-unit scales.3. Our study revealed that bass seasonally occupy up to 22% of the length of the mainstem NFJDR where subyearling Chinook salmon occur, and the primary period of sympatry between these species was in the early summer and not during peak water temperatures in late summer. Where these species co-occurred, bass occupied 60–76% of channel units used by subyearling Chinook salmon in the early summer and 28–46% of the channel units they occupied in the late summer. Because these rearing salmon were well below the gape limitation of bass, this overlap could result in either direct predation or sublethal effects of bass on subyearling Chinook salmon. The upstream extent of bass increased 10–23

  19. Competitive bass anglers: a new concern in sports medicine.

    Science.gov (United States)

    Read, Connor R; Watson, Shawna L; Perez, Jorge L; Estes, A Reed

    2017-09-01

    Competitive bass angling involves sport fishing against other anglers while targeting a species of fish known as the black basses. Due to the rapidly growing popularity of high school competitive bass angling in Alabama and the nature of the casting motion similar to that of overhead athletes, we sought to examine the prevalence of sports type injuries in this population. In spring 2016, an anonymous survey was distributed across two large scale competitive high school fishing tournaments, allowing for a broad sampling of anglers throughout the state of Alabama. Survey items included demographic information, relevant past medical history, and various pains associated with the shoulder, elbow and wrist. Results were recorded and analyzed electronically using Microsoft Excel and IBM SPSS statistical software. A total of 257 surveys were recorded. The response rate was 61%. The mean age of participating anglers was 15 ± 1.61 years. The majority (42%) of anglers fished year round. On average, anglers casted nearly 1,000 more times while competing versus fishing recreationally. Approximately 15% of anglers experienced shoulder, elbow, and wrist pain. The most common factors associated with pain included higher tournament cast counts, number of competitive years, number of tournaments/year, number of tournaments, and use of light weight lures. A large portion of high school competitive anglers experience upper extremity pain. Knowledge of angling factors associated with pain allow for the creation of a modifiable routine to help reduce pain in affected anglers and prevent pain in healthy anglers.

  20. 32 CFR Appendix E to Part 246 - Stars and Stripes (S&S) Board of Directors

    Science.gov (United States)

    2010-07-01

    ... 32 National Defense 2 2010-07-01 2010-07-01 false Stars and Stripes (S&S) Board of Directors E... DEFENSE (CONTINUED) MISCELLANEOUS STARS AND STRIPES (S&S) NEWSPAPER AND BUSINESS OPERATIONS Pt. 246, App. E Appendix E to Part 246—Stars and Stripes (S&S) Board of Directors A. Organization and Management...

  1. Microplastic in three urban estuaries, China.

    Science.gov (United States)

    Zhao, Shiye; Zhu, Lixin; Li, Daoji

    2015-11-01

    Estuarine Microplastics (MPs) are limited to know globally. By filtering subsurface water through 330 μm nets, MPs in Jiaojiang, Oujiang Estuaries were quantified, as well as that in Minjiang Estuary responding to Typhoon Soulik. Polymer matrix was analyzed by Raman spectroscopy. MP (estuaries influenced on MPs contamination levels. Typhoon didn't influence the suspended MP densities significantly. Our results provide basic information for better understanding suspended microplastics within urban estuaries and for managerial actions. Copyright © 2015. Published by Elsevier Ltd.

  2. An Investigation into the Uptake of Contaminants in Largemouth Bass and Sediment from the Lower Tombigbee and Mobile Rivers, 1992

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This report summarizes a study with the following results: 1. Mercury was detected in all largemouth bass composite samples, with highest levels found in bass...

  3. Stripe domains and magnetoresistance in thermally deposited nickel films

    Energy Technology Data Exchange (ETDEWEB)

    Sparks, P.D. E-mail: sparks@hmc.edu; Stern, N.P.; Snowden, D.S.; Kappus, B.A.; Checkelsky, J.G.; Harberger, S.S.; Fusello, A.M.; Eckert, J.C

    2004-05-01

    We report a study of the domain structure and magnetoresistance of thermally deposited nickel films. For films thicker than 17 nm, we observe striped domains with period varying with film thickness as a power law with exponent 0.21{+-}0.02 up to 120 nm thickness. There is a negative magnetoresistance for fields out of the plane.

  4. Monitoring quantity and quality of striped catfish pond effluent

    NARCIS (Netherlands)

    Heijden, van der P.G.M.; Poelman, M.; Bosma, R.H.; Long, N.; Son, V.M.

    2012-01-01

    The production of striped catfish and other fish species in ponds has several possible impacts on the environment, one of which is caused by the discharge of pond waste water (effluent), which is enriched with nitrogen and phosphorous compounds as result of feeding and fish faeces. To restrict the

  5. Glassy spin dynamics in stripe ordered cuprate system

    Energy Technology Data Exchange (ETDEWEB)

    Curro, N. J. (Nicholas J.)

    2004-01-01

    The unusual glassy dynamics exhibited by the spin fluctuations in the stripe-ordered cuprates can be quantitatively measured by La nuclear magnetic resonance. We analyze the spin lattice relaxation data in the low temperature tetragonal structural phase of La{sub 1.8-x}Eu{sub 0.2}Sr{sub x}CuO{sub 4} and find that there is a distribution of local fluctuations times, with a Vogel-Fulcher temperature dependence. Furthermore, the data are consistent with a stretched exponential form for the dynamical spin correlation function, typical of glassy systems. Several doped transition metal oxides exhibit unusual properties associated with heterogeneous charge order. Of particular interest are the cuprates, which become high temperature superconductors within a certain doping range. Charge stripe correlations may play a crucial role in the mechanism for the superconductivity, yet detailed information about the microscopic structure of the charge order as well as the dynamics of this stripes have remained elusive. Nuclear magnetic resonance (NMR) probes the local, low energy spin and charge fluctuations at the nuclear sites, and provides important clues to charge-stripe dynamics.

  6. Distribution patterns of striped mullet Mugil cephalus in mangrove ...

    African Journals Online (AJOL)

    The density of juvenile mullet differed significantly among the creeks, but the spatial patterns within them were consistent with higher densities upstream in three of ... striped mullet vary among sites and creeks in response to refuge availability from turbid, shallow water and the accessibility of food from benthic microalgae.

  7. Intervertebral Disk Disease in 3 Striped Skunks (Mephitis mephitis)

    NARCIS (Netherlands)

    Krauss, M.W.; Benato, L.; McDonnell, J.; Schoemaker, N.J.; Westerhof, I.; Bronson, E.; Gielen, I.; van Caelenberg, A.; Hellebuyck, T.; Meij, B.P.; de Decker, S.

    Objective To describe diagnostic findings, surgical technique, and outcome in 3 striped skunks (Mephitis mephitis) with a history of paraparesis. Study Design Case series. Animals Skunks (n = 3) with paraparesis. Methods Neurologic examination revealed upper motor neuron disease (T2–L2) in 2 skunks

  8. leaf and stripe rust resistance among ethiopian grown wheat ...

    African Journals Online (AJOL)

    ADMIN

    ABSTRACT: Ethiopian grown wheat varieties and lines were studied to identify germplasm sources possessing resistance to leaf rust caused by Puccinia triticina and stripe rust (P. striiformis). Sixty-four lines were included of which 38 were bread wheat (Triticum aestivum, 2n=6x=42, AABBDD) and 26 durum wheat (T.

  9. Siim Nestor soovitab : Supreme 7aastane. White Stripes / Siim Nestor

    Index Scriptorium Estoniae

    Nestor, Siim, 1974-

    2005-01-01

    Kolmik Supreme tähistab oma 7. tegutsemisaastat 24. juunil Von Krahlis, kus toimub ka Krecki debüütalbumi "If You Live" (väljaandjaks ettevõte Umblu) esitlus. Detroidi blues-rock duo White Stripes esitleb oma uut albumit "Get Behind Me Satan" 29. juunil Tallinnas klubis Hollywood

  10. Anatomical studies of the gastrointestinal tract of the striped sand ...

    African Journals Online (AJOL)

    A study was carried out on the gross anatomical, morphometric features and histology of the gastrointestinal tract of the Striped Sand Snake (Psammophis sibilans). Ten snakes (five males and five females) were euthanized and dissected for the study. The gastrointestinal tract appeared as a straight tubular organ from oral ...

  11. Prey preferences of adult sea bass Dicentrarchus labrax in the northeastern Atlantic: implications for bycatch of common dolphin Delphinus delphis

    OpenAIRE

    Spitz, Jerome; Chouvelon, Tiphaine; Cardinaud, M.; Kostecki,; Lorance, Pascal

    2013-01-01

    In the northeastern Atlantic, adult sea bass (Dicentrarchus labrax) is one of largest fish living on the shelf, and this species has important commercial value. However, pelagic trawl fisheries that target sea bass have negative operational interactions with common dolphins (Delphinus delphis). Our goal was to determine the diet of adult sea bass in the Bay of Biscay from stomachcontent and stable-isotope analyses, and explore the dietary overlap between sea bass and common dolphins. We found...

  12. Assessment of the performance of stocked northern and Florida largemouth bass and their progeny in Briery Creek Lake, Virginia

    OpenAIRE

    Hoover, Randall S.

    1992-01-01

    This study examined the suitability of Florida largemouth bass (Micropterus salmoides floridanus) for introduction into Virginia and other mid-latitude waters by comparing the performance of northern (M. s. salmoides), Florida, and hybrid largemouth bass in a 342 ha south-central Virginia reservoir, Briery Creek Lake (BcL). Fingerling northern and Florida largemouth bass were stocked into Briery Creek Lake in 1986, following impoundment, and in 1987. Largemouth bass were col...

  13. 77 FR 28305 - Temporary Rule To Delay Start Date of 2012-2013 South Atlantic Black Sea Bass Commercial Fishing...

    Science.gov (United States)

    2012-05-14

    ... 2012-2013 fishing season for the commercial black sea bass sector of the snapper-grouper fishery from... 17B for black sea bass resulted in in-season closures for the commercial and recreational sectors as... commercial sector. Commercial management measures contained in Amendment 18A include: A black sea bass pot...

  14. Habitat selection and abundance of young-of-year smallmouth bass in north temperate lakes

    Science.gov (United States)

    Brown, Peter James; Bozek, Michael A.

    2010-01-01

    Habitat use during early life history plays an important role in the ecology of smallmouth bass Micropterus dolomieu in north temperate lakes. The highest levels of mortality occur during the first year of life, and the habitat selected probably affects mortality. We used resource selection functions and abundance data from two northern Wisconsin lakes to determine the habitats that influence the survival of smallmouth bass. Coarse substrates were consistently important to both nesting locations and young-of-year smallmouth bass. Young smallmouth bass used woody structure after swimming from their nests but disassociated themselves from habitats with more complex woody structure by August. Nonwoody cobble areas offer protection for young-of-year smallmouth bass without attracting predators, as woody habitats do. The decline in the abundance of young-of-year smallmouth bass was best fit to an exponential decay function in woody habitats, but in rock habitats it was linear. Habitat selection by young-of-year smallmouth bass shifts over time, and the shift is linked to predation risk: woody habitats initially offer them an advantage with respect to spawning but eventually provide their predators greater opportunities for ambush. This shift underscores the importance of having a diversity of littoral habitats. This study provides the first quantifiable analyses describing the habitat features selected by young-of-year smallmouth bass and links these descriptions to population dynamics.

  15. Diet Overlap and Predation between Smallmouth Bass and Walleye in a North Temperate Lake

    Science.gov (United States)

    Aaron P. Frey; Michael A. Bozek; Clayton J. Edwards; Steve P. Newman

    2003-01-01

    Walleye (Stizostedion vitreum vitreum) and smallmouth bass (Micropterus dolomieu) diets from Big Crooked Lake, Wisconsin were examined to assess the degree of diet overlap and predation occurring between these species in an attempt to deternine whether walleye influence smallmouth bass recruitment, which is consistently low...

  16. Indian estuaries: Dynamics, ecosystems, and threats

    Digital Repository Service at National Institute of Oceanography (India)

    Shetye, S.R.

    runoff lead to striking temporal changes in salinity and velocity fields in these estuaries. A number of habitats that have adapted to such changes are found in the estuaries. The climate change will have an adverse impact on the habitats. So will local...

  17. Organic matter processing in tidal estuaries

    NARCIS (Netherlands)

    Middelburg, J.J.; Herman, P.M.J.

    2007-01-01

    Processing of organic matter in tidal estuaries modifies its transfer from the river to the sea. We examined the distribution and the elemental and isotopic composition of organic matter in nine tidal estuaries along the Atlantic coast of Europe (Elbe, Ems, Thames, Rhine, Scheldt, Loire, Gironde,

  18. Methane distribution in European tidal estuaries

    NARCIS (Netherlands)

    Middelburg, J.J.; Nieuwenhuize, J.; Iversen, N.; Høgh, N.; De Wilde, H.; Helder, W.; Seifert, R.; Christof, O.

    2002-01-01

    Methane concentrations have been measured along salinity profiles in nine tidal estuaries in Europe (Elbe, Ems, Thames, Rhine, Scheldt, Loire, Gironde, Douro and Sado). The Rhine, Scheldt and Gironde estuaries have been studied seasonally. A number of different methodologies have been used and they

  19. Trapping of sediment in tidal estuaries

    NARCIS (Netherlands)

    Chernetsky, A.

    2012-01-01

    An estuary is an ideal habitat for various aquatic species. At the same time, estuaries and adjacent rivers are used as fast navigation routes between the coastal and inland territories. The fast industrial development and the subsequent growth of cities and trade have led to large-scale

  20. Improving the quality of stripes in structured-light three-dimensional profile measurement

    Science.gov (United States)

    Qi, Zhaoshuai; Wang, Zhao; Huang, Junhui; Xue, Qi; Gao, Jianmin

    2017-03-01

    Measuring objects with high dynamic range (HDR) reflectivity by coded structured-light, captured stripes are usually seriously distorted by reflectivity, causing inaccurate measurement results. A stripe enhancement method is proposed to deal with the problem. The method is based on the correspondence between phase and intensity of the stripe. First, the phase map of the captured stripe pattern is retrieved by phase-shift algorithm and multiexposure method, where saturation and low contrast of the stripe are eliminated; then, the modulation of stripes is normalized to eliminate the influence of reflectivity; finally, the enhanced stripe is obtained by assembling the modulation and the phase map. Experimental results demonstrate that the method is efficient for objects with HDR reflectivity and achieves high accuracy.

  1. Distinct Nature of Static and Dynamic Magnetic Stripes in Cuprate Superconductors

    Science.gov (United States)

    Jacobsen, H.; Holm, S. L.; Lǎcǎtuşu, M.-E.; Rømer, A. T.; Bertelsen, M.; Boehm, M.; Toft-Petersen, R.; Grivel, J.-C.; Emery, S. B.; Udby, L.; Wells, B. O.; Lefmann, K.

    2018-01-01

    We present detailed neutron scattering studies of the static and dynamic stripes in an optimally doped high-temperature superconductor, La2 CuO4 +y . We observe that the dynamic stripes do not disperse towards the static stripes in the limit of vanishing energy transfer. Therefore, the dynamic stripes observed in neutron scattering experiments are not the Goldstone modes associated with the broken symmetry of the simultaneously observed static stripes, and the signals originate from different domains in the sample. These observations support real-space electronic phase separation in the crystal, where the static stripes in one phase are pinned versions of the dynamic stripes in the other, having slightly different periods. Our results explain earlier observations of unusual dispersions in underdoped La2 -xSrx CuO4 (x =0.07 ) and La2 -xBax CuO4 (x =0.095 ).

  2. Comparison of modified Bass technique with normal toothbrushing practices for efficacy in supragingival plaque removal.

    Science.gov (United States)

    Poyato-Ferrera, M; Segura-Egea, J J; Bullón-Fernández, P

    2003-05-01

    This study was designed to compare the efficacy in supragingival plaque removal of normal toothbrushing practices and a particular toothbrushing technique, the modified Bass method. The research consisted of two identical experiments with two toothbrushing methods: the normal toothbrushing practices and the modified Bass technique. Forty-six secondary, non-dental students (10 males and 36 females) with ages ranging from 18 to 30 years were selected. Dental plaque was assessed according to the Turesky modification of Quigley-Hein Index. Subjects were requested not to brush their teeth 48 h prior to the baseline record of plaque index. Participants were instructed to brush twice daily during 3 min for the duration of the 3-week trial using their usual toothpaste. Plaque index was recorded at 2, 7 and 21 days. The modified Bass (Mod-Bass) technique was significantly (P 0.05), but did so with the modified Bass technique (P important improvement in the oral hygiene of the patients.

  3. Variabilite climatique et hydrologique dans la basse vallee de l ...

    African Journals Online (AJOL)

    La présente étude vise à analyser la variabilité hydroclimatique et ses effets dans la basse vallée de l'Ouémé à Bonou. La démarche méthodologique s'est focalisée sur l'analyse des données climatologiques (Pluie) sur la période 1950 à 2010, (ETP) de 1965 à 2010 et les données hydrométriques (débits mensuels) sur la ...

  4. Terra e terror em Phase IV, de Saul Bass

    Directory of Open Access Journals (Sweden)

    Juliana Fausto

    2016-07-01

    Full Text Available Os anos 1970 foram palco de uma onda de filmes do gênero eco-horror, dos quais se destaca Phase IV (1974, único longa-metragem dirigido por Saul Bass. O filme é tomado no artigo como um experimento diante da interpelação de povos não-humanos, no caso, as formigas, à humanidade, representada pelo discurso científico. Tendo em vista a atual catástrofe ambiental, propõe-se que o cinema seja um lugar privilegiado para o desenvolvimento de um aparato mítico-real capaz de lidar com o fim do mundo humano.

  5. Skeletal class II malocclusion correction using the Bass appliance

    Directory of Open Access Journals (Sweden)

    Jigar Doshi

    2015-01-01

    Full Text Available Skeletal class II malocclusion is best treated by growth modification using the myofunctional appliances or the orthopedic appliances or the combination of the both depending upon the type of malocclusion encountered during the growth period of an individual. Though all myofunctional appliances work on the same principle with few basic differences; the orthodontist has to make a choice among the plethora of the appliances at his disposal. The present article is a case report of class II malocclusion treatment using the Bass appliance for the growth modification, which was followed by fixed appliance for the occlusal detailing.

  6. Alternative plant protein sources in sea bass diets

    Directory of Open Access Journals (Sweden)

    Edo D’Agaro

    2010-01-01

    Full Text Available A control diet (C containing animal protein (mainly fish meal was compared with 6 experimental diets containing different  plant proteins (soybean meal, SM; rapeseed meal, RM; potato protein concentrate, PPC and a mix of the three vegetable  protein sources, M. The plant protein replaced either 25 (1 or 50 (2% of the animal protein with the exception of diet  RM2 where the substitution rate was lowered to 35%, and in diet M where 55% of the total protein given was replaced in  equal amounts by the three plant proteins. For the growth trial, which lasted 97 days, 528 European sea bass (initial live  weight 107 ± 0,06g, distributed among 24 fibreglass tanks with three replicates per treatment, were used. The pelleted  feed was distributed 5 times per day using an automatic dispenser. Energy, crude protein and crude fat digestibility values  for fish meal and soybean meal were similar and not statistically different while the values for rapeseed meal and potato  protein concentrate were significantly lower. Digestive utilization for NFE was higher in fish meal and decreased significant-  ly in soybean meal, rapeseed meal and even more noticeably in potato protein concentrate. Diet digestibility values showed  a similar trend with a clear worsening effect at the higher inclusion rates used. Diet M gave digestibility coefficients lower  than those observed with diets C, SM1, SM2, RS1and RS2and higher than those of diets PPC1and PPC2. Fish fed a diet in  which 25% of the total protein was replaced by soybean had similar performances to those of the control group. On the  other hand, sea bass fed diets SM2, RS1, RS2and M had lower growth rates and worse feed utilization than those observed  with the control. Finally, specific growth rates and food conversion efficiency in sea bass fed diets containing potato protein  concentrate were poor because of the low palatability. These results show that soybean meal can substitute up to 25% of

  7. Terra e terror em Phase IV, de Saul Bass

    OpenAIRE

    Juliana Fausto

    2016-01-01

    Os anos 1970 foram palco de uma onda de filmes do gênero eco-horror, dos quais se destaca Phase IV (1974), único longa-metragem dirigido por Saul Bass. O filme é tomado no artigo como um experimento diante da interpelação de povos não-humanos, no caso, as formigas, à humanidade, representada pelo discurso científico. Tendo em vista a atual catástrofe ambiental, propõe-se que o cinema seja um lugar privilegiado para o desenvolvimento de um aparato mítico-real capaz de lidar com o fim do mundo ...

  8. Striped patterns induced by delamination of drying colloidal films.

    Science.gov (United States)

    Giorgiutti-Dauphiné, F; Pauchard, L

    2015-02-04

    The drying of a dispersion of nanoparticles on a solid substrate can result in the formation of spontaneous well-ordered stripe patterns left on the substrate. The evaporation of solvent yields large stresses in the material which usually cause crack formation and delamination from the substrate. The formation of these stripes results from a balance between the drying stress which drives the delamination crack front propagation and the cohesive properties of the material. These solid residues arise behind the crack front and can be perpendicular or parallel to the front. It is then possible to inhibit these structures by modifying the cohesive properties of the material. This self-assembly into an ordered pattern can offer an efficient method to produce a patterned surface in a simple way.

  9. Controlled particle transport in a plasma chamber with striped electrode

    Science.gov (United States)

    Jiang, Ke; Li, Yang-fang; Shimizu, T.; Konopka, U.; Thomas, H. M.; Morfill, G. E.

    2009-12-01

    The controlled transport of micrometer size dust particles in a parallel-plate radio frequency discharge has been investigated. The lower stainless steel electrode consisted of 100 independently controllable electrical metal stripes. The voltage signals on these stripes were modulated, causing traveling plasma sheath distortions. Because the particles trapped in local potential wells moved according to the direction of the distortion, the transport velocity could be actively controlled by adjusting frequencies and phase shifts of the applied periodic voltage signals. To investigate the detailed principle of this transport, molecular dynamic simulations was performed to reproduce the observations with the plasma background conditions calculated by separated particle-in-cell simulations for the experimental parameters. The findings will help develop novel technologies for investigating large-scale complex plasma systems and techniques for achieving clean environments in plasma processing reactors.

  10. Collaborative Potential between National Estuary Programs ...

    Science.gov (United States)

    Estuaries are among the most productive ecosystems in the world, providing unique habitat for freshwater and marine species as well as valuable social and economic benefits. The wealth of ecosystem goods and services from estuaries has led to growth and development of human communities in adjacent areas and an increase in human activities that can adversely affect water quality and critical habitat. Managing for sustainable estuaries requires a balance of environmental concerns with community social and economic values. This has created an opportunity to leverage Environmental Protection Agency (EPA) scientific knowledge and tools with National Estuary Program (NEP) planning and management expertise to address environmental challenges in important estuarine ecosystems. The non-regulatory National Estuary Program (NEP) was outlined in the Clean Water Act to provide stakeholders an opportunity to monitor and manage ‘nationally significant’ estuaries. Currently there are 28 estuaries in the NEP, broadly distributed across the Atlantic, Pacific and Gulf Coasts, and in Puerto Rico. The local NEP management conferences must address a variety of environmental issues, from water quality and natural resources to coastal and watershed development. While the underlying objectives of each NEP are quite similar, each has unique landscapes, land uses, waterbodies, habitats, biological resources, economies and social culture. Consequently, the effects and severity of anthr

  11. Analyses of otoliths from juvenile black sea bass collected from estuaries in SC, FL, NJ, and NY: 2008-2009.

    Data.gov (United States)

    Baruch Institute for Marine and Coastal Sciences, Univ of South Carolina — Snappers/Groupers have traditionally been some of the most desired demersal fishes in the South Atlantic Bight and are the most abundant and diverse group of large...

  12. Characterizing seston in the Penobscot River Estuary.

    Science.gov (United States)

    Meseck, Shannon L; Li, Yaqin; Sunila, Inke; Dixon, Mark; Clark, Paul; Lipsky, Christine; Stevens, Justin R; Music, Paul; Wikfors, Gary H

    2017-10-01

    The Penobscot River Estuary is an important system for diadromous fish in the Northeast United States of American (USA), in part because it is home to the largest remnant population of Atlantic salmon, Salmo salar, in the country. Little is known about the chemical and biological characteristics of seston in the Penobscot River Estuary. This study used estuarine transects to characterize the seston during the spring when river discharge is high and diadromous fish migration peaks in the Penobscot River Estuary. To characterize the seston, samples were taken in spring 2015 for phytoplankton identification, total suspended matter (TSM), percent organic TSM, chlorophyll a, particle size (2 μm-180 μm), particulate carbon and nitrogen concentrations, and stable carbon and nitrogen isotopes. The estuarine profiles indicate that TSM behaved non-conservatively with a net gain in the estuary. As phytoplankton constituted only 1/1000 of the particles, the non-conservative behavior of TSM observed in the estuary was most likely not attributable to phytoplankton. Particulate carbon and nitrogen ratios and stable isotope signals indicate a strong terrestrial, allochthonous signal. The seston in the Penobscot River Estuary was dominated by non-detrital particles. During a short, two-week time period, Heterosigma akashiwo, a phytoplankton species toxic to finfish, also was detected in the estuary. A limited number of fish samples, taken after the 2015 Penobscot River Estuary bloom of H. akashiwo, indicated frequent pathological gill damage. The composition of seston, along with ichthyotoxic algae, suggest the need for further research into possible effects upon resident and migratory fish in the Penobscot River Estuary. Published by Elsevier Ltd.

  13. Numerical Investigation of Tunable Plasmonic Tweezers based on Graphene Stripes.

    Science.gov (United States)

    Samadi, Mohsen; Darbari, Sara; Moravvej-Farshi, Mohammad Kazem

    2017-11-06

    We are proposing tunable plasmonic tweezers, consisting two parallel graphene stripes, which can be utilized to effectively trap and sort nanoparticles. We show that by electrostatically tuning the chemical potential of a graphene stripe by about 100 meV (equivalent to ΔV G ≈ 4.4 V), the plasmonic force can be switched efficiently, without a need to switch the laser intensity. This enables high speed and low power switching with a large number of switching cycles. By applying two independent and appropriate gate bias voltages to the stripes, the direction of the plasmonic force can be reversed, which leads to separation of nanoparticles that satisfy the trapping conditions. Numerical simulations show that the potential depths obtained for polystyrene nanoparticles of refractive index n = 1.5717 and radii r ≥ 50 nm is deeper than -10 k B T , confirming the ability of the proposed system to effectively separate such nanoparticles. This capability holds for smaller nanoparticles with larger refractive indices. Finally, performing thermal simulations, we have demonstrated that the heat induced by the illumination increases the fluid temperature by at most 9 °C, having negligible effect on the trapping mechanism. The proposed system opens up new possibilities in developing tunable on-chip manipulation devices, suitable for biological applications.

  14. Observing the fluctuating stripes in high-Tc superconductors

    Science.gov (United States)

    Cvetkovic, V.; Nussinov, Z.; Mukhin, S.; Zaanen, J.

    2008-01-01

    Superfluids and superconductors have been around for a long time and their explanation in terms of the Bogoliubov theory for bosons and the BCS theory for fermions belong to the highlights of twentieth century physics. However, it appears that these theories are too primitive to address the high-Tc superconductivity found in copper oxides. These electron systems seem to behave more like a dense, strongly correlated liquid contrasting markedly with the conventional quantum gasses: these show strong dynamical correlations on mesoscopic length and time scales associated with stripes, a particular form of electron crystallization. Resting on the gauge theory of topological quantum melting in 2+1 dimensions relevant for the cuprates, we describe the limit which is exactly opposite to the gas limit: the superconductor with the maximum possible amount of transient translational order. We predict that in this "orderly limit" an extra collective mode appears, and this "massive shear photon" can be regarded as a universal fingerprint of the fluctuating stripes. This mode is visible in the electrodynamic response and the ramification of our theory is that electron energy loss spectroscopy can be employed to prove or disprove the existence of dynamical stripes in cuprate superconductors.

  15. Ultrafast charge localization in a stripe-phase nickelate

    Energy Technology Data Exchange (ETDEWEB)

    Coslovich, Giacomo; Huber, Bernhard; Lee, Wei-Sheng; Sasagawa, Takao; Hussain, Zahid; Bechtel, Hans A.; Martin, Michael C.; Shen, Zhi-Xun; W. Schoenlein, Robert; A. Kaindl, Robert

    2013-08-30

    Self-organized electronically-ordered phases are a recurring feature in correlated materials, resulting in e.g. fluctuating charge stripes whose role in high-Tc superconductivity is under debate. However, the relevant cause-effect relations between real-space charge correlations and low-energy excitations remain hidden in time-averaged studies. Here, we reveal ultrafast charge localization and lattice vibrational coupling as dynamical precursors of stripe formation in the model compound La1.75Sr0.25NiO4, using ultrafast and equilibrium mid-infrared spectroscopy. The opening of a pseudogap at a crossover temperature T* far above long-range stripe formation establishes the onset of electronic localization which is accompanied by an enhanced Fano asymmetry of Ni-O stretch vibrations. Ultrafast excitation triggers a sub-picosecond dynamics exposing the synchronous modulation of electron-phonon coupling and charge localization. These results illuminate the role of localization in forming the pseudogap in nickelates, opening a path to understanding this mysterious phase in a broad class of complex oxides.

  16. NATURAL TRANSVERSE VIBRATIONS OF A PRESTRESSED ORTHOTROPIC PLATE-STRIPE

    Directory of Open Access Journals (Sweden)

    Egorychev Oleg Aleksandrovich

    2012-10-01

    Full Text Available The article represents a new outlook at the boundary-value problem of natural vibrations of a homogeneous pre-stressed orthotropic plate-stripe. In the paper, the motion equation represents a new approximate hyperbolic equation (rather than a parabolic equation used in the majority of papers covering the same problem describing the vibration of a homogeneous orthotropic plate-stripe. The proposed research is based on newly derived boundary conditions describing the pin-edge, rigid, and elastic (vertical types of fixing, as well as the boundary conditions applicable to the unfixed edge of the plate. The paper contemplates the application of the Laplace transformation and a non-standard representation of a homogeneous differential equation with fixed factors. The article proposes a detailed representation of the problem of natural vibrations of a homogeneous orthotropic plate-stripe if rigidly fixed at opposite sides; besides, the article also provides frequency equations (no conclusions describing the plate characterized by the following boundary conditions: rigid fixing at one side and pin-edge fixing at the opposite side; pin-edge fixing at one side and free (unfixed other side; rigid fixing at one side and elastic fixing at the other side. The results described in the article may be helpful if applied in the construction sector whenever flat structural elements are considered. Moreover, specialists in solid mechanics and theory of elasticity may benefit from the ideas proposed in the article.

  17. Fitness Consequences of Boldness in Juvenile and Adult Largemouth Bass.

    Science.gov (United States)

    Ballew, Nicholas G; Mittelbach, Gary G; Scribner, Kim T

    2017-04-01

    To date, most studies investigating the relationship between personality traits and fitness have focused on a single measure of fitness (such as survival) at a specific life stage. However, many personality traits likely have multiple effects on fitness, potentially operating across different functional contexts and stages of development. Here, we address the fitness consequences of boldness, under seminatural conditions, across life stages and functional contexts in largemouth bass (Micropterus salmoides). Specifically, we report the effect of boldness on (1) juvenile survivorship in an outdoor pond containing natural prey and predators and (2) adult reproductive success in three outdoor ponds across three reproductive seasons (years). Juvenile survival was negatively affected by boldness, with bolder juveniles having a lower probability of survival than shyer juveniles. In contrast, bolder adult male bass had greater reproductive success than their shyer male counterparts. Female reproductive success was not affected by boldness. These findings demonstrate that boldness can affect fitness differently across life stages. Further, boldness was highly consistent across years and significantly heritable, which suggests that boldness has a genetic component. Thus, our results support theory suggesting that fitness trade-offs across life stages may contribute to the maintenance of personality variation within populations.

  18. The STRIPES Trial - Support to Rural India's Public Education System

    Directory of Open Access Journals (Sweden)

    Elbourne Diana

    2010-02-01

    Full Text Available Abstract Background Performance of primary school students in India lags far below government expectations, and major disparity exists between rural and urban areas. The Naandi Foundation has designed and implemented a programme using community members to deliver after-school academic support for children in over 1,100 schools in five Indian states. Assessments to date suggest that it might have a substantial effect. This trial aims to evaluate the impact of this programme in villages of rural Andhra Pradesh and will compare test scores for children in three arms: a control and two intervention arms. In both intervention arms additional after-school instruction and learning materials will be offered to all eligible children and in one arm girls will also receive an additional 'kit' with a uniform and clothes. Methods/Design The trial is a cluster-randomised controlled trial conducted in conjunction with the CHAMPION trial. In the CHAMPION trial 464 villages were randomised so that half receive health interventions aiming to reduce neonatal mortality. STRIPES will be introduced in those CHAMPION villages which have a public primary school attended by at least 15 students at the time of a baseline test in 2008. 214 villages of the 464 were found to fulfil above criteria, 107 belonging to the control and 107 to the intervention arm of the CHAMPION trial. These latter 107 villages will serve as control villages in the STRIPES trial. A further randomisation will be carried out within the 107 STRIPES intervention villages allocating half to receive an additional kit for girls on the top of the instruction and learning materials. The primary outcome of the trial is a composite maths and language test score. Discussion The study is designed to measure (i whether the educational intervention affects the exam score of children compared to the control arm, (ii if the exam scores of girls who receive the additional kit are different from those of girls

  19. The Peel Inlet-Harvey Estuary Study.

    Science.gov (United States)

    Walker, Warren; Black, Ronald

    1979-01-01

    Describes how the department of physics of the Western Australian Institute of Technology (WAIT) has been involved in the Peel Inlet-Harvey Estuary study. An appendix which presents the departmental approach to curriculum matters is also included. (HM)

  20. Heavy metals in Mindhola river estuary, India

    Digital Repository Service at National Institute of Oceanography (India)

    Zingde, M.D.; Rokade, M.A; Mandalia, A

    The heavy metal concentrations are studied along the Mindhola river estuary. Surface and bottom water samples were collected using Niskin Sampler. The sediment samples were collected using a Van Veen grab. The heavy metal concentration is estimated...

  1. AFSC/ABL: Southeast Alaska Estuaries Data

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The dataset contains trawl and seine catches from Southeast Alaskan estuaries sampled from 1995 to 2008. The data also include physical variables (temp, salinity,...

  2. Climate Ready Estuaries Partner Projects Map

    Science.gov (United States)

    CRE partners with the National Estuary Program to develop climate change projects in coastal U.S. areas, such as bays and harbors; to develop adaptation action plans, identify climate impacts and indicators, and more. This map shows project locations.

  3. Birds of Mahi River estuary, Gujarat, India

    Directory of Open Access Journals (Sweden)

    P.J. Pandya

    2010-06-01

    Full Text Available The Mahi river estuary is one of the major estuaries of Gujarat. This paper presents a comprehensive list of birds of the Mahi river estuary (nearly 50 km stretch and the adjacent banks/ravines and defines the avian diversity at three major estuarine gradations with a brief check of similarity and diversity within the three. The present observation is the outcome of a 3 year period from August 2006 to July 2009. A sum total of 118 species belonging to 42 families were reported and listed as on Upstream, Midstream, and Downstream of estuary. No significant difference was seen in the species richness at the three zones; a change in avian composition at upstream and downstream was notable.

  4. The environmental characteristics of the Ganga estuary

    Digital Repository Service at National Institute of Oceanography (India)

    SenGupta, R.; Murty, C.S.; Bhattathiri, P.M.A.

    . Occurrence and distribution of bacteria of health significance can be expected to be fairly high in the estuary. Significant numbers of the bacteria, which is the etiologic agent for food-bome gastroenteritis, are present in the waters and sediments...

  5. Benthic studies in south Gujarat estuaries

    Digital Repository Service at National Institute of Oceanography (India)

    Govindan, K.; Varshney, P.K.; Desai, B.N.

    Benthic biomass and faunal composition in relation to various environmental conditions of the four South Gujarat estuaries namely the Auranga, Ambika, Purna and Mindola were studied and compared. Mean population density of benthos in Auranga, Ambika...

  6. National Estuary Program Study Area Boundaries

    Data.gov (United States)

    U.S. Environmental Protection Agency — There are 28 National Estuary Programs (NEPs) in the U.S.that implement habitat protection and restoration projects with their partners. This work takes place within...

  7. Environmental factors structuring fish composition and assemblages in a small macrotidal estuary (eastern English Channel)

    Science.gov (United States)

    Selleslagh, Jonathan; Amara, Rachid

    2008-09-01

    The fish assemblage structure was analyzed along an estuarine gradient of a small macrotidal estuary (the Canche, France). Fishes were collected every two months between May 2006 and July 2007 from 12 sampling stations using a 1.5-m beam trawl with a 5 mm mesh size in the cod end. To complement this information, sampling was also performed using 15-m fyke nets (8 mm mesh size in the cod end). For each sample, abiotic (temperature, salinity, pH, oxygen, turbidity, river flow, wind speed and depth) and biotic (macro crustacean species abundances) were recorded. Throughout the study, 28 fish species belonging to 20 families were collected. Fish catches were dominated by juveniles, especially Young-Of-the-Year (YOY) for the majority of the species. According to the Index of Relative Importance (IRI), common goby Pomatoschistus microps, flounder Platichtys flesus, sprat Sprattus sprattus, sea-bass Dicentrarchus labrax and plaice Pleuronectes platessa were the most abundant species, together accounting for 99.2% of the total IRI. Estuarine residents (ER = 66.2%) and marine juvenile migrants species (MJ = 31.4%) were the most important ecological guilds. The structure of the fish assemblage and its relationship to environmental variables was examined using multivariate techniques. Cluster and non-metric multidimensional scaling (nMDS) analysis defined six distinct groups in the Canche estuary, which are discriminated by specific species (SIMPER). Spatio-temporal variations in fish assemblage structure reflect the density peaks of the most abundant species. Spearman rank correlations and canonical correspondence analysis (CCA) showed that among the ten environmental variables examined, temperature, salinity and Crangon crangon (a potential predator for YOY fish or prey for older ones) are the three most important factors influencing fish species richness and abundances. Our observations reinforce the idea that certain fish species may have different life history styles in

  8. Estuaries.

    Science.gov (United States)

    Awkerman, Gary L.

    This publication is designed for use in standard science curricula to develop oceanologic manifestations of certain science topics. Included are teacher guides, student activities, and demonstrations designed to impart ocean understanding to high school students. When the student has completed this unit, he should be able to: (1) define an…

  9. A morphology-stitching method to improve Landsat SLC-off images with stripes

    Directory of Open Access Journals (Sweden)

    M. Aghamohamadnia

    2014-02-01

    Full Text Available Stripes are artifacts in satellite images caused by various factors such as hardware defects. In some cases, these artifacts are introduced by some mitigating algorithms like Landsat SLC-off (Scan Line Corrector gap-filling methods of LLHM (Local Linear Histogram Matching and AWLHM (Adaptive Window Linear Histogram Matching, which leave stripes as a byproduct. To improve Landsat SLC-off images with stripes, we propose an algorithm involving some hypothetical stripe-crossing stitch lines using the mean pixel value of the stitch lines.

  10. Antibacterial and anti-PAF activity of lipid extracts from sea bass (Dicentrarchus labrax) and gilthead sea bream (Sparus aurata).

    Science.gov (United States)

    Nasopoulou, Constantina; Karantonis, Haralabos C; Andriotis, Michalis; Demopoulos, Constantinos A; Zabetakis, Ioannis

    2008-11-15

    The anti-PAF and the antibacterial activities of lipid extracts obtained from cultured sea bass (Dicentrarchus labrax) and cultured gilthead sea bream (Sparus aurata) were evaluated. Total lipids of sea bass and gilthead sea bream exerted PAF-like activity while, in higher amounts they inhibited this PAF activity. Neutral lipids of both sea bass and gilthead sea bream contained only PAF antagonists while the polar lipid fractions contained both PAF antagonists and agonists. Total lipids of sea bass exhibited stronger PAF-like activity than did those of gilthead sea bream; however, neutral lipids of sea bass contained stronger PAF antagonists than did gilthead sea bream. Total lipids of both sea bass and gilthead sea bream exhibited antibacterial activity only towards Staphylococcus aureus (S. aureus) with those of sea bass being more potent. Subsequently, neutral lipids of both sea bass and gilthead sea bream also showed antibacterial activity against S. aureus and less so towards Escherichia coli (E. coli), while only neutral lipids of sea bass showed antibacterial activity against Enterococcusfaecalis (E. faecalis). Sea bass neutral lipids were more active against S. aureus than were those of gilthead sea bream, while their activity towards E. coli was similar. Polar lipids of both sea bass and gilthead sea bream showed antibacterial activity against all bacteria strains. Sea bass polar lipids were more active towards S. aureus than were those of gilthead sea bream, while their activities against E. faecalis and E. coli were the same. The detected antibacterial activities of the lipid extracts isolated from sea bass and gilthead sea bream were observed in amounts equal to those that exerted either PAF inhibition or PAF-like activity, suggesting that PAF antagonists and agonists of fish lipids may be responsible for the antibacterial activity. Copyright © 2008 Elsevier Ltd. All rights reserved.

  11. The importance of the river-estuary interface (REI) zone in estuaries

    African Journals Online (AJOL)

    drinie

    2002-07-03

    Jul 3, 2002 ... The effect of the REI zone on fish was examined in the freshwater-rich Great Fish Estuary and in the freshwater-deprived Kariega Estuary. Estuarine associated fishes responded ... required to sustain ecologically sound estuarine ecosystems in terms of the South African National Water Act (36) of 1998.

  12. The importance of the river-estuary interface (REI) zone in estuaries

    African Journals Online (AJOL)

    drinie

    2002-07-03

    Jul 3, 2002 ... Two estuaries with contrasting river flow regimes were investigated. The Great Fish system was selected for this project because it receives a regular freshwater input and is navigable by boat beyond the estuarine section. This facilitated comparable sampling in both the river and estuary regions. In contrast ...

  13. The Estuary Book: A Guide to Promoting Understanding and Regional Management of Maine's Estuaries and Embayments.

    Science.gov (United States)

    Ruffing, Jenny

    The objective of this document is to provide information about estuaries, the impact of uses on the environmental health of an estuary, and what communities and concerned individuals can do to manage and protect their local estuarine resources successfully. Much of the information presented here pertains to other embayments along the Maine coast…

  14. Combining telephone surveys and fishing catches self-report: the French sea bass recreational fishery assessment

    National Research Council Canada - National Science Library

    Rocklin, Delphine; Levrel, Harold; Drogou, Mickaël; Herfaut, Johanna; Veron, Gérard

    2014-01-01

    .... This paper assesses the characteristics and catches of the French European sea bass recreational fishery along the Atlantic coasts, through the combination of large-scale telephone surveys and fishing diaries study...

  15. Ocean acidification impacts on black sea bass and scup embryos, responses of finfish in laboratory experiments

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Black sea bass (Centropristis striata) and scup (Stenotomus chrysops) compose important recreational and commercial fisheries along the United States Atlantic coast....

  16. Siim Nestor soovitab : Back2Bass Helsinki. Teenage Kicks / Siim Nestor

    Index Scriptorium Estoniae

    Nestor, Siim, 1974-

    2002-01-01

    Soome trummi-ja-bassi klubi Back2Bass 28. septembril KuKu klubis Tallinnas. 28. sept. Von Krahlis toimuvast live-üritusest Teenage Kicks, kus ansambel Claire's Birthaday esitleb ka oma uut singlit "Do You Remember"

  17. Mercury in largemouth bass and spotted gar of the Florida Panther National Wildlife Refuge

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — From June 21 to 25, 1990, 21 largemouth bass (Micropterussa salmoides) and five spotted gar (Lepisosteus oculatus) were collected from selected locations at the...

  18. Mercury in largemouth bass of the Lake Woodruff National Wildlife Refuge

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — From August 24 to 28, 1990, largemouth bass (Micropterus salmoides) were collected from selected locations at the Lake Woodruff National Wildlife Refuge, Volusia...

  19. Mercury in largemouth bass and other fishes of the Merritt Island National Wildlife Refuge

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — From August 16 to 22, 1990, largemouth bass (Micropterus salmoides), bowfin (Amia calva) and spotted seatrout (Cynoscion nebulosus) were collected from selected...

  20. Mercury concentrations in largemouth bass of the Crystal River National Wildlife Refuge

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — From July 17 to 26, 1990, 20 largemouth bass (Micropterus salmoides) were collected from four locations at the Crystal River National Wildlife Refuge, Citrus County,...

  1. Mercury concentrations in largemouth bass and other fishes of the Loxahatchee National Wildlife Refuge

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — From September 17-21, 1990, 32 largemouth bass (Micropterus salmoides) and three other fish species were collected from eight locations at the Loxahatchee National...

  2. 75 FR 48927 - Sierra National Forest, Bass Lake Ranger District, California, Fish Camp Project

    Science.gov (United States)

    2010-08-12

    ... INFORMATION CONTACT: Mark Lemon, Interdisciplinary Team Leader, at Sierra National Forest, Bass Lake Ranger... sustain a fire) wildland urban intermix area, (3) increase the vigor and health of mixed conifer stands...

  3. Transformational Leadership: An Evolving Concept Examined through the Works of Burns, Bass, Avolio, and Leithwood

    National Research Council Canada - National Science Library

    Jan Stewart

    2006-01-01

    ...: instructional leadership and transformational leadership. This paper will review the conceptual and empirical development of transformational leadership as it evolved through the work of James MacGregor Burns, Bernard M. Bass, Bruce J...

  4. Evaluation of an 11-in maximum length limit for smallmouth bass populations in northeastern Minnesota

    National Research Council Canada - National Science Library

    Isermann, D.A; Page, K.S; Radomski, P; Drake, M

    2009-01-01

    The authors evaluated the effects of an 11-in maximum length limit (total length; TL) on the size structure of smallmouth bass Micropterus dolomieu caught by anglers in four northeast Minnesota lakes...

  5. Integration of Bass Enhancement and Active Noise Control System in Automobile Cabin

    OpenAIRE

    Wang, Liang; Gan, Woon Seng; Kuo, Sen M.

    2008-01-01

    With the advancement of digital signal processing technologies, consumers are more concerned with the quality of multimedia entertainment in automobiles. In order to meet this demand, an audio enhancement system is needed to improve bass reproduction and cancel engine noise in the cabins. This paper presents an integrated active noise control system that is based on frequency-sampling filters to track and extract the bass information from the audio signal, and a multifrequency active noise eq...

  6. Ash clouds stripes: mechanisms and implications for dispersion and detection.

    Science.gov (United States)

    Spanu, Antonio; de'Michieli Vitturi, Mattia; Barsotti, Sara; Clarke, Amanda B.

    2017-04-01

    Occasionally, volcanic clouds show horizontal structures (or stripes) oriented perpendicular to the prevailing wind direction. This phenomenon has been observed by satellite images and reported at several volcanoes worldwide (e.g., Klyuchevskaya in Kamchatka and Eyjafjallajokull in Iceland) and it was particularly evident at Mt. Etna during different eruptions in 2001 and 2006 where stripes 2 km to 5 km wide were documented and interpreted to be waves. A variety of possible forcing mechanisms exist, including mountain waves and Kelvin-Helmholtz instabilities, and create atmospheric waves either by heating or dynamic effects. The aim of this study is two-fold: first to analyze different driving mechanisms, and second to study how the waves affect dispersion and the detection of ash clouds. To this end, we use an Eulerian fully-compressible non-hydrostatic atmospheric model (WRF) at high resolution (200m x 200m) and initialized with an atmospheric sounding profile. The simulated wind field is then coupled (one way) with a Lagrangian particle model (LPAC) to simulate the transport of both passive tracers as well as particles with mass. Results are compared with MODIS satellite images. The Etna test cases show how high resolution weather data are critical to reproducing stripes structures in the plume. In ash cloud models, vertical diffusion is typically ignored and plumes are assumed to disperse only due to horizontal diffusion. Our results provide evidence that wave-like phenomena exert a significant control on aerosol and ash dispersal, by influencing vertical diffusion and particle settling velocity and consequently ash residence time in the atmosphere.

  7. WE-EF-207-10: Striped Ratio Grids: A New Concept for Scatter Estimation

    Energy Technology Data Exchange (ETDEWEB)

    Hsieh, S [Stanford University, Stanford, CA (United States)

    2015-06-15

    Purpose: To propose a new method for estimating scatter in x-ray imaging. We propose the “striped ratio grid,” an anti-scatter grid with alternating stripes of high scatter rejection (attained, for example, by high grid ratio) and low scatter rejection. To minimize artifacts, stripes are oriented parallel to the direction of the ramp filter. Signal discontinuities at the boundaries between stripes provide information on local scatter content, although these discontinuities are contaminated by variation in primary radiation. Methods: We emulated a striped ratio grid by imaging phantoms with two sequential CT scans, one with and one without a conventional grid, and processed them together to mimic a striped ratio grid. Two phantoms were scanned with the emulated striped ratio grid and compared with a conventional anti-scatter grid and a fan-beam acquisition, which served as ground truth. A nonlinear image processing algorithm was developed to mitigate the problem of primary variation. Results: The emulated striped ratio grid reduced scatter more effectively than the conventional grid alone. Contrast is thereby improved in projection imaging. In CT imaging, cupping is markedly reduced. Artifacts introduced by the striped ratio grid appear to be minimal. Conclusion: Striped ratio grids could be a simple and effective evolution of conventional anti-scatter grids. Unlike several other approaches currently under investigation for scatter management, striped ratio grids require minimal computation, little new hardware (at least for systems which already use removable grids) and impose few assumptions on the nature of the object being scanned.

  8. Behavior and Body Patterns of the Larger Pacific Striped Octopus.

    Science.gov (United States)

    Caldwell, Roy L; Ross, Richard; Rodaniche, Arcadio; Huffard, Christine L

    2015-01-01

    Over thirty years ago anecdotal accounts of the undescribed Larger Pacific Striped Octopus suggested behaviors previously unknown for octopuses. Beak-to-beak mating, dens shared by mating pairs, inking during mating and extended spawning were mentioned in publications, and enticed generations of cephalopod biologists. In 2012-2014 we were able to obtain several live specimens of this species, which remains without a formal description. All of the unique behaviors listed above were observed for animals in aquaria and are discussed here. We describe the behavior, body color patterns, and postures of 24 adults maintained in captivity. Chromatophore patterns of hatchlings are also shown.

  9. Behavior and Body Patterns of the Larger Pacific Striped Octopus.

    Directory of Open Access Journals (Sweden)

    Roy L Caldwell

    Full Text Available Over thirty years ago anecdotal accounts of the undescribed Larger Pacific Striped Octopus suggested behaviors previously unknown for octopuses. Beak-to-beak mating, dens shared by mating pairs, inking during mating and extended spawning were mentioned in publications, and enticed generations of cephalopod biologists. In 2012-2014 we were able to obtain several live specimens of this species, which remains without a formal description. All of the unique behaviors listed above were observed for animals in aquaria and are discussed here. We describe the behavior, body color patterns, and postures of 24 adults maintained in captivity. Chromatophore patterns of hatchlings are also shown.

  10. Response to "Critical Assessment of the Evidence for Striped Nanoparticles".

    Directory of Open Access Journals (Sweden)

    Quy Khac Ong

    Full Text Available Stirling et al., (10.1371/journal.pone.0108482 presented an analysis on some of our publications on the formation of stripe-like domains on mixed-ligand coated gold nanoparticles. The authors shed doubts on some of our results however no valid argument is provided against what we have shown since our first publication: scanning tunneling microscopy (STM images of striped nanoparticles show stripe-like domains that are independent of imaging parameters and in particular of imaging speed. We have consistently ruled out the presence of artifacts by comparing sets of images acquired at different tip speeds, finding invariance of the stipe-like domains. Stirling and co-workers incorrectly analyzed this key control, using a different microscope and imaging conditions that do not compare to ours. We show here data proving that our approach is rigorous. Furthermore, we never solely relied on image analysis to draw our conclusions; we have always used the chemical nature of the particles to assess the veracity of our images. Stirling et al. do not provide any justification for the spacing of the features that we find on nanoparticles: ~1 nm for mixed ligand particles and ~ 0.5 nm for homoligand particles. Hence our two central arguments remain unmodified: independence from imaging parameters and dependence on ligand shell chemical composition. The paper report observations on our STM images; none is a sufficient condition to prove that our images are artifacts. We thoroughly addressed issues related to STM artifacts throughout our microscopy work. Stirling et al. provide guidelines for what they consider good STM images of nanoparticles, such images are indeed present in our literature. They conclude that the evidences we provided to date are insufficient, this is a departure from one of the authors' previous article which concluded that our images were composed of artifacts. Given that four independent laboratories have reproduced our measurements and

  11. Unfolding of vortices into topological stripes in a multiferroic material.

    Science.gov (United States)

    Wang, X; Mostovoy, M; Han, M G; Horibe, Y; Aoki, T; Zhu, Y; Cheong, S-W

    2014-06-20

    Multiferroic hexagonal RMnO(3) (R=rare earths) crystals exhibit dense networks of vortex lines at which six domain walls merge. While the domain walls can be readily moved with an applied electric field, the vortex cores so far have been impossible to control. Our experiments demonstrate that shear strain induces a Magnus-type force pulling vortices and antivortices in opposite directions and unfolding them into a topological stripe domain state. We discuss the analogy between this effect and the current-driven dynamics of vortices in superconductors and superfluids.

  12. Factors influencing recruitment of walleye and white bass to three distinct early ontogenetic stages

    Science.gov (United States)

    DeBoer, Jason A.; Pope, Kevin L.

    2015-01-01

    Determining the factors that influence recruitment to sequential ontogenetic stages is critical for understanding recruitment dynamics of fish and for effective management of sportfish, particularly in dynamic and unpredictable environments. We sampled walleye (Sander vitreus) and white bass (Morone chrysops) at 3 ontogenetic stages (age 0 during spring: ‘age-0 larval’; age 0 during autumn: ‘age-0 juvenile’; and age 1 during autumn: ‘age-1 juvenile’) from 3 reservoirs. We developed multiple linear regression models to describe factors influencing age-0 larval, age-0 juvenile and age-1 juvenile walleye and white bass abundance indices. Our models explained 40–80% (68 ± 9%; mean ± SE) and 71%–97% (81 ± 6%) of the variability in catch for walleye and white bass respectively. For walleye, gizzard shad were present in the candidate model sets for all three ontogenetic stages we assessed. For white bass, there was no unifying variable in all three stage-specific candidate model sets, although walleye abundance was present in two of the three white bass candidate model sets. We were able to determine several factors affecting walleye and white bass year-class strength at multiple ontogenetic stages; comprehensive analyses of factors influencing recruitment to multiple early ontogenetic stages are seemingly rare in the literature. Our models demonstrate the interdependency among early ontogenetic stages and the complexities involved with sportfish recruitment.

  13. The influence of diet, consumption and lipid use on recruitment of white bass

    Science.gov (United States)

    Eckmayer, W.J.; Margraf, F.J.

    2004-01-01

    The abundance of white bass (Morone chrysops) in Lake Erie has declined in recent years, sparking interest in mechanisms influencing its recruitment. We evaluate two mechanisms affecting recruitment: diet and the potential for competition, and storage of lipid energy reserves and the relationship to overwinter survival. The fish in our study were characteristic of white bass in the northern portion of their range, feeding predominantly on zooplankton. Only the largest age-0 white bass ate fish as a significant portion of their diet. Over the summer sampling period, we found decreasing ration sizes, expressed as a percentage of maximum ration, as the summer progressed with a concomitant decrease in the relative amount of lipid storage. In laboratory experiments, age-0 white bass held at 5??C and given food ad libitum did feed, but at rates that were insufficient to maintain body weight. Loss in weight was accompanied with a loss in lipids at a rate of 2.8 mg of lipids per gram of body weight per day. Based on our data, we concluded that age-0 white bass in Lake Erie were food-limited. Food limitation resulted in reduced growth rates, presumably related to competition with other planktivorous fishes. Reduced growth results in increased mortality and, ultimately, low recruitment through increased risk of predation by larger piscivorous fishes, reduced ability for white bass to switch to more energetically profitable piscivory and the increased likelihood of higher overwinter mortality because of reduced lipid stores.

  14. Female morphology of Philometra rubra (Nematoda: Philometridae), a parasite of the abdominal cavity of the striped sea-bass Morone saxatilis (Moronidae, Perciformes) in the USA

    Czech Academy of Sciences Publication Activity Database

    Moravec, František; Dyková, Iva; de Buron, I.

    2009-01-01

    Roč. 56, č. 1 (2009), s. 64-66 ISSN 0015-5683 R&D Projects: GA MŠk LC522 Institutional research plan: CEZ:AV0Z60220518 Keywords : Philometra * Morone * USA Subject RIV: GJ - Animal Vermins ; Diseases, Veterinary Medicine Impact factor: 1.266, year: 2009

  15. Differential regulation of cystic fibrosis transmembrane conductance regulator and Na+,K+ -ATPase in gills of striped bass, Morone saxatilis: effect of salinity and hormones

    DEFF Research Database (Denmark)

    Madsen, Steffen; Jensen, Lars Nørholm; Tipsmark, Christian Kølbaek

    2007-01-01

    Effects of salinity and hormones on cystic fibrosis transmembrane conductance regulator (CFTR) and alpha-subunit Na(+),K(+) -ATPase (alpha-NKA) mRNA (analysed by semi-quantitative PCR) and protein expression (analysed by western blotting and immunocytochemistry) were investigated in gills...... filaments at equal intensity. Cortisol decreased serum [Na(+)] in FW fish, but had no effect on gill Na(+),K(+) -ATPase activity, alpha-NKA and CFTR mRNA levels. Incubation of gill tissue with cortisol (24 h, >0.01 micro g/ml) and epidermal growth factor (EGF 10 micro g/ml) decreased CFTR mRNA levels......-regulated kinase (ERK) 1/2 was stimulated by EGF but not affected by IGF-I. This study is the first to report a branchial EGF response and to demonstrate a functional ERK 1/2 pathway in the teleost gill. In conclusion, CFTR and Na(+),K(+) -ATPase are differentially regulated by salinity and hormones in gills...

  16. Benthos of Beypore and Korapuzha estuaries of North Kerala

    Digital Repository Service at National Institute of Oceanography (India)

    Devi, K.S.; Sankaranarayanan, V.N.; Venugopal, P.

    The benthos from Beypore and Korapuzha estuaries were studied for one year. Environmental features, sediment characteristics and organic carbon content were estimated. Benthic density was high during monsoon and postmonsoon in both the estuaries...

  17. Variations of dissolved oxygen in Mandovi and Zuari estuaries

    Digital Repository Service at National Institute of Oceanography (India)

    DeSousa, S.N.; SenGupta, R.

    During non-monsoon months the estuaries were well mixed showing uniform oxygen concentrations from surface to bottom. However, during monsoon months both the estuaries showed stratified conditions with surface water showing high oxygen concentration...

  18. Pollution induced tidal variability in water quality of Mahim Estuary

    Digital Repository Service at National Institute of Oceanography (India)

    Zingde, M.D.; Sabnis, M.M.

    Variability of water quality due to release of wastewater in Mahim Estuary (Maharashtra, India) and associated nearshore waters is discussed. The mixing of low salinity contaminated estuary water with high salinity bay water was considerably...

  19. Skagit IMW - Skagit River Estuary Intensively Monitored Watershed Project

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This study evaluates system-level effects of several estuary restoration projects on juvenile Chinook salmon production in the Skagit River estuary. The monitoring...

  20. Comparisons of egg quality traits, egg weight loss and hatchability between striped and normal duck eggs.

    Science.gov (United States)

    Yuan, J; Wang, B; Huang, Z; Fan, Y; Huang, C; Hou, Z

    2013-01-01

    1. The egg quality of striped and normal duck eggs was compared to determine why striped eggs show decreased hatchability. A total of 430 eggs, obtained from a Pekin duck breeder flock aged 50-65 wks, were used in three experiments. The eggs were weighed and assigned randomly to measure egg quality traits, egg weight (EW) loss and hatchability during incubation. 2. There were no significant differences between egg types in terms of egg shape index, eggshell strength and thickness, albumen height, Haugh unit, yolk colour, weight of the eggshell with or without membranes, calcium, phosphorus, copper and manganese contents in the eggshell (with the inner and outer membranes or without the inner membrane), albumen weight, dry matter of albumen, crude protein (CP) of thick albumen and pH of the thick albumen. 3. The weight of eggshells with membranes, weight of thick albumen and CP of thin albumen in striped eggs were lower than those in normal eggs. 4. The thin albumen in striped eggs was heavier than that in normal eggs. The pH of the thin albumin in striped egg was significantly higher than that in normal eggs. 5. There were no significant differences in EW loss during incubation or duckling weight between striped and normal eggs. However, the hatchability of striped eggs was lower. 6. The lower weight of the eggshell inner membrane and thick albumen, lower CP content and higher pH in the thin albumen of striped eggs might contribute to lower hatchability.

  1. QTL mapping of adult-plant resistance to stripe rust in wheat line P9897

    Science.gov (United States)

    Stripe rust (or yellow rust), caused by Puccinia striiformis f. sp. tritici (Pst), is a devastating fungal disease of common wheat. Wheat line P9897 showed adult-plant resistance (APR) to stripe rust for several years. To map resistance quantitative trait loci (QTL), F2:3 lines from a cross of P9897...

  2. Effective genes for resistance to stripe rust and virulence of Puccinia ...

    African Journals Online (AJOL)

    Effective genes for resistance to stripe rust and virulence of Puccinia striiformis f. sp. tritici in Pakistan. H Bux, M Ashraf, X Chen, S Mumtaz. Abstract. Virulence patterns of wheat stripe rust were studied under the field conditions across four environmentally different locations: Quaid-i-Azam University (Islamabad), Pirsabak ...

  3. Effect of stripe rust on the yield response of wheat to nitrogen

    Directory of Open Access Journals (Sweden)

    Rakhesh Devadas

    2014-08-01

    Full Text Available Nitrogen (N is the most important fertiliser element determining the productivity of wheat. N nutrition is known to affect the level of stripe rust infection, with higher N associated with increased disease severity. Stripe rust, caused by Puccinia striiformis f. sp. tritici, is a major yield-limiting disease of wheat in Australia. This paper describes experiments designed to investigate the agronomic response to the interaction of various levels of N application and stripe rust severity in wheat varieties differing in response. Experimental plots were established in crop seasons 2006 and 2007 on the Liverpool Plains of northern NSW, Australia. Yield, biomass, grain protein content (GPC and harvest index (HI data were recorded. Increased rates of N increased the severity of stripe rust during grain filling. N application also increased yield and GPC in all varieties in both years. Stripe rust reduced the yield of the rust-susceptible wheat varieties, and GPC and proportion of added N recovered in the grain were also reduced in one year but not the other. It was evident from our experiment that stripe rust caused yield loss accompanied by either no change or reduction in GPC, indicating that the total amount of N entering the grain was reduced by stripe rust. The effects of stripe rust on N yield are most likely associated with reduced uptake of N during grain filling.

  4. Color Fringes Bordering Black Stripes at the Bottom of a Swimming Pool

    Science.gov (United States)

    Fuster, Gonzalo; Rojas, Roberto; Slüsarenko, Viktor

    2016-01-01

    We have observed a nice example of chromatic dispersion due to refraction in water, in the form of color fringes bordering the black stripes that exist at the bottom of a swimming pool. Here we give a qualitative description of the phenomenon, explaining the role of the black stripes and the dispersive index of refraction of water.

  5. Genetics of adult plant stripe rust resistance in CSP44, a selection ...

    Indian Academy of Sciences (India)

    Wheat line CSP44, a selection from an Australian bread wheat cultivar Condor, has shown resistance to stripe rust in India since the last twenty years. Seedlings and adult plants of CSP44 showed susceptible infection types against stripe rust race 46S119 but displayed average terminal disease severity of 2.67 on adult ...

  6. Genetic analysis and location of gene for resistance to stripe rust in ...

    Indian Academy of Sciences (India)

    Strubes Dickkopf is the sixth differential in the world set for wheat stripe (yellow) rust. It is very important to clarify its genetic character of resistance to stripe rust and to develop the molecular markers linked to resistance genes. The NIL Taichung 29*6/Strubes Dickkopf, which was obtained by Strubes Dickkopf as the gene ...

  7. Allelic variation at loci controlling stripe rust resistance in spring wheat

    Indian Academy of Sciences (India)

    2014-08-20

    Aug 20, 2014 ... Wheat (Triticum aestivum L.) rusts have been one of the main yield limiting factors in wheat cultivation throughout the world. Three kinds of rust diseases that attack wheat crop are leaf (brown) rust, stripe (yellow) rust and stem (black) rust. Leaf rust is caused by Puccinia triticina f.sp. tritici; stripe rust is ...

  8. The environment that conditions the Mandovi and Zuari estuaries

    Digital Repository Service at National Institute of Oceanography (India)

    Shetye, S.R.; Shankar, D.; Neetu, S.; Suprit, K.; Michael, G.S.; Chandramohan, P.

    and Shankar (2007) used a multivariate interpolation scheme that incorporated elevation as the third variable (in addition to the two hor- izontal co-ordinates) to map the rainfall separately for the windward and leeward sides. The ridge separating... dominates circu- lation and mixing in the estuaries. Such estuaries are often referred to as monsoonal estuaries. Such monsoonal estuaries occur along the entire west coast of India. They are used for dumping of domestic and industrial waste, fishing...

  9. Change in Stripes for Cholesteric Shells via Anchoring in Moderation

    Science.gov (United States)

    Tran, Lisa; Lavrentovich, Maxim O.; Durey, Guillaume; Darmon, Alexandre; Haase, Martin F.; Li, Ningwei; Lee, Daeyeon; Stebe, Kathleen J.; Kamien, Randall D.; Lopez-Leon, Teresa

    2017-10-01

    Chirality, ubiquitous in complex biological systems, can be controlled and quantified in synthetic materials such as cholesteric liquid crystal (CLC) systems. In this work, we study spherical shells of CLC under weak anchoring conditions. We induce anchoring transitions at the inner and outer boundaries using two independent methods: by changing the surfactant concentration or by raising the temperature close to the clearing point. The shell confinement leads to new states and associated surface structures: a state where large stripes on the shell can be filled with smaller, perpendicular substripes, and a focal conic domain (FCD) state, where thin stripes wrap into at least two, topologically required, double spirals. Focusing on the latter state, we use a Landau-de Gennes model of the CLC to simulate its detailed configurations as a function of anchoring strength. By abruptly changing the topological constraints on the shell, we are able to study the interconversion between director defects and pitch defects, a phenomenon usually restricted by the complexity of the cholesteric phase. This work extends the knowledge of cholesteric patterns, structures that not only have potential for use as intricate, self-assembly blueprints but are also pervasive in biological systems.

  10. Change in Stripes for Cholesteric Shells via Anchoring in Moderation

    Directory of Open Access Journals (Sweden)

    Lisa Tran

    2017-11-01

    Full Text Available Chirality, ubiquitous in complex biological systems, can be controlled and quantified in synthetic materials such as cholesteric liquid crystal (CLC systems. In this work, we study spherical shells of CLC under weak anchoring conditions. We induce anchoring transitions at the inner and outer boundaries using two independent methods: by changing the surfactant concentration or by raising the temperature close to the clearing point. The shell confinement leads to new states and associated surface structures: a state where large stripes on the shell can be filled with smaller, perpendicular substripes, and a focal conic domain (FCD state, where thin stripes wrap into at least two, topologically required, double spirals. Focusing on the latter state, we use a Landau–de Gennes model of the CLC to simulate its detailed configurations as a function of anchoring strength. By abruptly changing the topological constraints on the shell, we are able to study the interconversion between director defects and pitch defects, a phenomenon usually restricted by the complexity of the cholesteric phase. This work extends the knowledge of cholesteric patterns, structures that not only have potential for use as intricate, self-assembly blueprints but are also pervasive in biological systems.

  11. Rotationally driven 'zebra stripes' in Earth's inner radiation belt.

    Science.gov (United States)

    Ukhorskiy, A Y; Sitnov, M I; Mitchell, D G; Takahashi, K; Lanzerotti, L J; Mauk, B H

    2014-03-20

    Structured features on top of nominally smooth distributions of radiation-belt particles at Earth have been previously associated with particle acceleration and transport mechanisms powered exclusively by enhanced solar-wind activity. Although planetary rotation is considered to be important for particle acceleration at Jupiter and Saturn, the electric field produced in the inner magnetosphere by Earth's rotation can change the velocity of trapped particles by only about 1-2 kilometres per second, so rotation has been thought inconsequential for radiation-belt electrons with velocities of about 100,000 kilometres per second. Here we report that the distributions of energetic electrons across the entire spatial extent of Earth's inner radiation belt are organized in regular, highly structured and unexpected 'zebra stripes', even when the solar-wind activity is low. Modelling reveals that the patterns are produced by Earth's rotation. Radiation-belt electrons are trapped in Earth's dipole-like magnetic field, where they undergo slow longitudinal drift motion around the planet because of the gradient and curvature of the magnetic field. Earth's rotation induces global diurnal variations of magnetic and electric fields that resonantly interact with electrons whose drift period is close to 24 hours, modifying electron fluxes over a broad energy range into regular patterns composed of multiple stripes extending over the entire span of the inner radiation belt.

  12. Flipper development in the Mediterranean striped dolphin (Stenella coeruleoalba).

    Science.gov (United States)

    Calzada, N; Aguilar, A

    1996-08-01

    Studies of population biology are scarce in Mediterranean striped dolphins (Stenella coeruleoalba) mostly because of the lack of samples. Until now, studies of physical maturity, growth, and development of the flipper bones were not available for this species in the Mediterranean. The osteological features and metric characters of the pectoral limbs of Mediterranean striped dolphins were analyzed with radiological techniques. Measurements were made directly on the radiographic films. We found five carpal bones arranged in a proximal row of three and a distal row of two, although one or two additional osseous elements were occasionally observed. The phalangeal formula (excluding metacarpals) was established as 1-2:8-9-10:6-5-7:3-2:1-2. In metacarpals, epiphyseal ossification centers matured at the same time at both ends. As a general rule, the ossification of the epiphyses in the flipper bones showed a decreasing gradient in the proximodistal direction, confirming the pattern previously described in other species. Phalangeal epiphyses were not useful as indicators of skeletal maturity, and grading epiphyseal maturation of the distal radius and ulna is proposed as the more straight-forward and precise method for assessing bone maturation. In females, maturity of the flipper was achieved between 5 and 6 years of age and 160-175 cm of body length, whereas this maturation occurred between 8 and 9 years of age and 170-181 cm in length in males. Prediction of gender through examination of flipper structure was not feasible.

  13. Endothelial plasmalemmal vesicles have a characteristic striped bipolar surface structure.

    Science.gov (United States)

    Peters, K R; Carley, W W; Palade, G E

    1985-12-01

    Capillary endothelial cells have a large population of small (65-80 nm diameter in transmission electron microscopy) vesicles of which a large fraction is associated with the plasmalemma of the luminal and abluminal side. We studied the fine structure and distribution of these plasmalemmal vesicles by high resolution scanning electron microscopy in cultured endothelial cells obtained from bovine adrenal cortical capillaries. Cell monolayers were covered with polylysine-coated silicon chips, split in high potassium buffer, fixed in aldehyde mixtures, and then treated with OsO4 and thiocarbohydrazide. After critical point drying, the specimens were coated with a thin (less than 2 nm) continuous film of chromium. On the cytoplasmic aspect of the dorsal plasmalemmal fragments seen in such specimens, plasmalemmal vesicles appear as uniform vesicular protrusions approximately 70-90 nm in diameter, preferentially concentrated in distinct large fields in which they occur primarily as single units. Individual plasmalemmal vesicles exhibit a striped surface fine structure which consists of ridges approximately 10 nm in diameter, separated by furrows and oriented as meridians, often ending at two poles on opposite sides of the vesicles in a plane parallel to the plasmalemma. This striped surface structure is clearly distinct from the cage structure of coated pits found, at low surface density, on the same specimens. The cytoplasmic aspect of the plasmalemma proper is covered by a fibrillar infrastructure which does not extend over plasmalemmal vesicles but on which the latter appear to be anchored by fine filaments.

  14. Seasonal variation of the salinity in the Zuari estuary, Goa

    Digital Repository Service at National Institute of Oceanography (India)

    Shetye, S.R.; Murty, C.S.

    the estuary is vertically mixed and the two processes controlling the transport of salt are run off induced advective transport out of the estuary, and tidally induced diffusive transport into the estuary. The magnitude of the latter is about 20% larger...

  15. The physico-chemical characteristics of Imo River Estuary in ...

    African Journals Online (AJOL)

    The physicochemical characteristics of Imo River Estuary were studied from April to September, 2011 to assess the water quality. The estuary is located at the coastal part of Ikot Abasi Local Government Area of Akwa Ibom State in southeastern Nigeria. Sampling was done monthly at fishing grounds in the estuary ...

  16. Maintaining the ecological flows of estuaries: a critical reflection on ...

    African Journals Online (AJOL)

    Maintaining the ecological flows of estuaries: a critical reflection on the application and interpretation of the relevant legal framework through the lens of the Klein River Estuary. ... These estuaries provide numerous environmental goods and services to the species situated within and adjacent to them. In an effort to improve ...

  17. The zooplankton of Mgazana, a mangrove estuary in Transkei ...

    African Journals Online (AJOL)

    The zooplankton of Mgazana, a mangrove estuary in Transkei, Southern Africa. T Wooldridge. Abstract. Mgazana, a mangrove estuary inTranskei, was investigated from May 1972 to March 1973 at six-week intervals. Salinities were consistently above 25 parts per thousand in the middle and lower estuary. In the upper ...

  18. Food web structure in three contrasting estuaries determined using ...

    African Journals Online (AJOL)

    Food web structure in three contrasting estuaries determined using stable isotope (δ 13 C) analysis. ... African Journal of Aquatic Science ... Food web structure in three contrasting estuaries, the freshwater-deprived Kariega, the freshwater-dominated Great Fish River and the temporarily open/closed Kasouga estuary, along ...

  19. The filtering capacity of selected Eastern Cape estuaries, South Africa

    African Journals Online (AJOL)

    Four Eastern Cape estuaries, the Kromme, Gamtoos, Swartkops and Sundays Estuaries have a permanent connection to the adjacent ocean, but differ in the amount of freshwater inflows as well as in the land-use patterns in their respective catchment areas. The nutrient loading to the four estuaries in terms of phosphate, ...

  20. Hydrodynamic and Sediment Modelling within a Macro Tidal Estuary: Port Curtis Estuary, Australia

    Directory of Open Access Journals (Sweden)

    Ryan J. K. Dunn

    2015-07-01

    Full Text Available An understanding of sediment transport processes and resultant concentration dynamics in estuaries is of great importance to engineering design awareness and the management of these environments. Predictive modelling approaches provide an opportunity to investigate and address potential system responses to nominated events, changes, or conditions of interest, often on high temporal and spatial resolution scales. In this study, a three-dimensional hydrodynamic model and wave model were validated and applied to generate forcing conditions for input into a sediment transport model for the period 7 May 2010–30 October 2010 within a macro tidal estuary, Port Curtis estuary (Australia. The hydrodynamic model was verified against surface and near-bottom current measurements. The model accurately reproduced the variations of surface and near-bottom currents at both a mid-estuary and upper-estuary location. Sediment transport model predictions were performed under varying meteorological conditions and tidal forcing over a 180-day period and were validated against turbidity data collected at six stations within Port Curtis estuary. The sediment transport model was able to predict both the magnitudes of the turbidity levels and the modulation induced by the neap and spring tides and wind-wave variations. The model-predicted (converted turbidity levels compared favourably with the measured surface water turbidity levels at all six stations. The study results have useful practical application for Port Curtis estuary, including providing predictive capabilities to support the selection of locations for monitoring/compliance sites.

  1. Dissolved Trace Metals in the Tay Estuary

    Science.gov (United States)

    Owens, R. E.; Balls, P. W.

    1997-04-01

    Dissolved trace metals have been studied over an annual cycle in the relatively pristine Tay estuary (Scotland). The absence of a major anthropogenic signal has enabled some of the more subtle natural processes controlling trace metal distributions to be identified. Concentration ranges of dissolved metals in the Tay are similar to, or lower than, those observed in more industrialized estuaries. All metals behave non-conservatively in the Tay. Interactions with biogenic and detrital particulate phases are important in controlling dissolved trace metal concentrations. The degradation of organic matter appears to be particularly important for Cu. Removal of dissolved metals was observed in the turbidity maximum zone; a simple model was used to demonstrate that this could be accounted for by adsorption onto suspended particulate matter. At high salinity, coincident peaks of all six metals with ammonia and phosphate are attributed to sewage inputs from Dundee at the mouth of the estuary.

  2. Habitat selection and overlap of Atlantic salmon and smallmouth bass juveniles in nursery streams

    Science.gov (United States)

    Wathen, G.; Coghlan, S.M.; Zydlewski, Joseph D.; Trial, J.G.

    2011-01-01

    Introduced smallmouth bass Micropterus dolomieu have invaded much of the historic freshwater habitat of Atlantic salmon Salmo salar in North America, yet little is known about the ecological interactions between the two species. We investigated the possibility of competition for habitat between age-0 Atlantic salmon and age-0 and age-1 smallmouth bass by means of in situ observations and a mesocosm experiment. We used snorkel observation to identify the degree and timing of overlap in habitat use in our in situ observations and to describe habitat shifts by Atlantic salmon in the presence of smallmouth bass in our mesocosm experiments. In late July 2008, we observed substantial overlap in the depths and mean water column velocities used by both species in sympatric in situ conditions and an apparent shift by age-0 Atlantic salmon to shallower water that coincided with the period of high overlap. In the mesocosm experiments, we detected no overlap or habitat shifts by age-0 Atlantic salmon in the presence age-1 smallmouth bass and low overlap and no habitat shifts of Atlantic salmon and age-0 smallmouth bass in fall 2009. In 2009, summer floods with sustained high flows and low temperatures resulted in the nearly complete reproductive failure of the smallmouth bass in our study streams, and we did not observe a midsummer habitat shift by Atlantic salmon similar to that seen in 2008. Although this prevented us from replicating our 2008 experiments under similar conditions, the virtual year-class failure of smallmouth bass itself is enlightening. We suggest that future studies incorporate the effects of varying temperature and discharge to determine how abiotic factors affect the interactions between these species and thus mediate the outcomes of potential competition.

  3. Size-Dependent Consequences of Exogenous Cortisol Manipulation on Overwinter Survival and Condition of Largemouth Bass.

    Science.gov (United States)

    Midwood, Jonathan D; Peiman, Kathryn S; Burt, Aja E W; Sarker, Mohammed Yusuf; Nannini, Michael A; Wahl, David H; Cooke, Steven J

    2017-02-23

    Little is known about the size-dependent consequences of stressors on wild animals, which is particularly relevant during winter where size-specific trends in survival are common. Here, exogenous cortisol manipulation was used to investigate the effect of a physiological challenge on overwinter mortality and spring condition of largemouth bass (Micropterus salmoides) across a range of body sizes. Fish were wild-caught in the fall, assigned into either control or cortisol manipulated treatments, and held in replicated experimental ponds. For bass that survived the winter, length, mass, and health metrics (e.g., gonadosomatic index [GSI], hepatosomatic index [HSI], and water content) were determined in the spring. Winter survival was marginally lower for cortisol treated bass; however, there was no influence of initial length, mass, or condition on overwinter survival. When bass were grouped by size, survival was significantly higher for bass 300-350 mm in length compared to those influence spring health metrics, suggesting that largemouth bass that survived the winter were able to recover from the effects of the cortisol elevation. Initial size and sex were linked to some spring health metrics, with large females having the highest GSI and HSI scores. Overall, results from this study do not support the notion that there are size-dependent responses to cortisol manipulation in a teleost fish. Rather, this type of physiological challenge may modulate the natural rates of winter mortality that are primarily driven by starvation and predation, independent of body size, in subadult and adult largemouth bass. © 2017 Wiley Periodicals, Inc.

  4. Behavioural thermoregulation and bioenergetics of riverine smallmouth bass associated with ambient cold-period thermal refuge

    Science.gov (United States)

    Westhoff, Jacob T.; Paukert, Craig P.; Ettinger-Dietzel, Sarah; Dodd, H.R.; Siepker, Michael

    2016-01-01

    Smallmouth bass in thermally heterogeneous streams may behaviourally thermoregulate during the cold period (i.e., groundwater temperature greater than river water temperature) by inhabiting warm areas in the stream that result from high groundwater influence or springs. Our objectives were to determine movement of smallmouth bass (Micropterus dolomieu) that use thermal refuge and project differences in growth and consumption among smallmouth bass exhibiting different thermal-use patterns. We implanted radio transmitters in 29 smallmouth bass captured in Alley Spring on the Jacks Fork River, Missouri, USA, during the winter of 2012. Additionally, temperature archival tags were implanted in a subset of nine fish. Fish were tracked using radio telemetry monthly from January 2012 through January of 2013. The greatest upstream movement was 42.5 km, and the greatest downstream movement was 22.2 km. Most radio tagged fish (69%) departed Alley Spring when daily maximum river water temperature first exceeded that of the spring (14 °C) and during increased river discharge. Bioenergetic modelling predicted that a 350 g migrating smallmouth bass that used cold-period thermal refuge would grow 16% slower at the same consumption level as a fish that did not seek thermal refuge. Contrary to the bioenergetics models, extrapolation of growth scope results suggested migrating fish grow 29% more than fish using areas of stream with little groundwater influence. Our results contradict previous findings that smallmouth bass are relatively sedentary, provide information about potential cues for migratory behaviour, and give insight to managers regarding use and growth of smallmouth bass in thermally heterogeneous river systems.

  5. Discovery and validation of gene-linked diagnostic SNP markers for assessing hybridization between Largemouth bass (Micropterus salmoides) and Florida bass (M. floridanus).

    Science.gov (United States)

    Li, Chao; Gowan, Spencer; Anil, Ammu; Beck, Benjamin H; Thongda, Wilawan; Kucuktas, Huseyin; Kaltenboeck, Ludmilla; Peatman, Eric

    2015-03-01

    Efforts to improve recreational fisheries have included widespread stocking of Micropterus floridanus outside its native range of peninsular Florida. Hybridization of Florida bass (M. floridanus) with largemouth bass (Micropterus salmoides) has now dramatically expanded beyond a naturally occurring intergrade zone in the southeast U.S. In recent years, there has been growing interest in protecting the genetic integrity of native basses and assessing the impact and nature of M. salmoides/M. floridanus introgression from the standpoint of hatchery and sport-fishery managers, fish biologists, ecologists and evolutionary biologists. Here, we conducted RNA-seq-based sequencing of the transcriptomes of M. salmoides, M. floridanus and their F1 hybrid and identified a set of 3674 SNP markers with fixed-allelic differences from 2112 unique genes. We then developed a subset of 25 of these markers into a single diagnostic multiplex assay and validated its capacity for assessing integrity and hybridization in hatchery and wild populations of largemouth and Florida bass. The availability of this resource, high-quality transcriptomes and a large set of gene-linked SNPs, should greatly facilitate functional and population genomics studies in these key species and allow the identification of traits and processes under selection during introgressive hybridization. © 2014 John Wiley & Sons Ltd.

  6. Ciliated Protozoa of the polluted Tees estuary

    Science.gov (United States)

    Parker, James G.

    1981-03-01

    In a study of the ciliated Protozoa of Bran Sand, a sheltered beach in the Tees estuary, 20 putative species were identified. This beach was richer in species than the nearby North Gare beach. In experimental batch cultures, seawater from the estuary had an inhibitory effect upon growth of a strain of Uronema marinum Dujardin which was isolated from an unpolluted beach at Robin Hood's Bay. The tolerance to metals of a Tees strain of U. marinum was assessed in simple toxicity tests; lethal levels for this strain were found to be similar to those reported elsewhere for the Robin Hood's Bay strain.

  7. Estuary fish data - Juvenile salmon in migratory corridors of lower Columbia River estuary

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Sampling juvenile salmon and associated fishes in open waters of the lower Columbia River estuary. Field work includes bi-weekly sampling during the spring...

  8. Stripe noise removal of remote sensing images by total variation regularization and group sparsity constraint

    Directory of Open Access Journals (Sweden)

    Yong Chen

    2017-06-01

    Full Text Available Remote sensing images have been used in many fields, such as urban planning, military, and environment monitoring, but corruption by stripe noise limits its subsequent applications. Most existing stripe noise removal (destriping methods aim to directly estimate the clear images from the stripe images without considering the intrinsic properties of stripe noise, which causes the image structure destroyed. In this paper, we propose a new destriping method from the perspective of image decomposition, which takes the intrinsic properties of stripe noise and image characteristics into full consideration. The proposed method integrates the unidirectional total variation (TV regularization, group sparsity regularization, and TV regularization together in an image decomposition framework. The first two terms are utilized to exploit the stripe noise properties by implementing statistical analysis, and the TV regularization is adopted to explore the spatial piecewise smooth structure of stripe-free image. Moreover, an efficient alternating minimization scheme is designed to solve the proposed model. Extensive experiments on simulated and real data demonstrate that our method outperforms several existing state-of-the-art destriping methods in terms of both quantitative and qualitative assessments.

  9. Stripe to slab confinement for the linearization of macromolecules in nanochannels.

    Science.gov (United States)

    Benková, Zuzana; Námer, Pavol; Cifra, Peter

    2015-03-21

    We investigated the recently suggested advantageous analysis of chain linearization experiments with macromolecules confined in a stripe-like channel (Huang and Battacharya, EPL, 2014, 106, 18004) using Monte Carlo simulations. The enhanced chain extension in a stripe, which is due to the significant excluded volume interactions between the monomers in two dimensions, weakens considerably on transition to an experimentally feasible slit-like channel. Based on the chain extension-confinement strength dependence and the structure factor behavior for a chain in a stripe, we infer the excluded volume regime (de Gennes regime) typical for two-dimensional systems. On widening of the stripe in a direction perpendicular to the stripe plane, i.e. on the transition to the slab geometry, the advantageous chain extension decreases and a Gaussian regime is observed for not very long semiflexible chains. The evidence for pseudo-ideality in confined chains is based on four indicators: the extension curves, variation of the extension with the persistence length P, estimated limits for the regimes in the investigated systems, and the structure factor behavior. The slab behavior can be observed when the two-dimensional stripe (originally of a one-monomer thickness) reaches a reduced thickness D larger than approximately D/P ≈ 0.2 in the third dimension. This maximum height of a slab at which the advantage of a stripe is retained is very low and has implications for DNA linearization experiments.

  10. SCUBA: The Self-Contained Unified Bass Augmenter

    Science.gov (United States)

    Cceres, Juan Pablo; Mysore, Gautham J.; Trevio, Jeffrey

    2005-04-01

    The Self-Contained Unified Bass Augmenter (SCUBA) is a new augmentative OSC (Open Sound Control) controller for the tuba. SCUBA allows new expressive possibilities by adding onboard continuous and discrete sensors to provide user-controlled parametric data for the processing of the instruments natural sound in Pd. SCUBA endows acoustic instruments with parametric control of virtual instruments and provides a means of integrating the output of a virtual instrument with the natural sound of the tuba. The user sends controller data from the augmented tuba interface to the virtual instrument via FSRs (Force-Sensitive Resistors) and buttons mounted on the existing instrument interface. An AVRMini microcontroller converts raw sensor data to OSC (Open Sound Control) messages, which are mapped in Pd to control virtual instrument parameters. Virtual instrument output is integrated into the solo instrument interface via satellite speakers mounted in the bell; this allows for mixing of the instruments natural sound with that of the virtual instrument to create the impression of a single instrument. This integration is the goal of the SCUBA project: by providing a flexible but unified control interface and acoustic output, traditional acoustic instrument interfaces can be augmented and paired with virtual musical instruments. [We would like to thank Michael Gurevich, Max Matthews, Bill Verplank, Pascal Stang, and classmates from Music 250 (Fall 04) for assistance in the realization of this project.

  11. Swimming muscles power suction feeding in largemouth bass.

    Science.gov (United States)

    Camp, Ariel L; Roberts, Thomas J; Brainerd, Elizabeth L

    2015-07-14

    Most aquatic vertebrates use suction to capture food, relying on rapid expansion of the mouth cavity to accelerate water and food into the mouth. In ray-finned fishes, mouth expansion is both fast and forceful, and therefore requires considerable power. However, the cranial muscles of these fishes are relatively small and may not be able to produce enough power for suction expansion. The axial swimming muscles of these fishes also attach to the feeding apparatus and have the potential to generate mouth expansion. Because of their large size, these axial muscles could contribute substantial power to suction feeding. To determine whether suction feeding is powered primarily by axial muscles, we measured the power required for suction expansion in largemouth bass and compared it to the power capacities of the axial and cranial muscles. Using X-ray reconstruction of moving morphology (XROMM), we generated 3D animations of the mouth skeleton and created a dynamic digital endocast to measure the rate of mouth volume expansion. This time-resolved expansion rate was combined with intraoral pressure recordings to calculate the instantaneous power required for suction feeding. Peak expansion powers for all but the weakest strikes far exceeded the maximum power capacity of the cranial muscles. The axial muscles did not merely contribute but were the primary source of suction expansion power and generated up to 95% of peak expansion power. The recruitment of axial muscle power may have been crucial for the evolution of high-power suction feeding in ray-finned fishes.

  12. Pathology of striped dolphins (Stenella coeruleoalba) infected with Brucella ceti.

    Science.gov (United States)

    González-Barrientos, R; Morales, J-A; Hernández-Mora, G; Barquero-Calvo, E; Guzmán-Verri, C; Chaves-Olarte, E; Moreno, E

    2010-05-01

    Seventeen striped dolphins (Stenella coeruleoalba) displaying swimming disorders compatible with neurological syndromes were investigated for Brucella infection. Sixteen dolphins had meningoencephalomyelitis. Serum antibody against Brucella antigen was detected in all 14 animals tested and Brucella ceti was isolated from eight out of nine animals. Brucella antigen was detected in the brain by immunofluorescence, but not by immunohistochemical labelling. By contrast, Brucella antigen was demonstrated by immunohistochemistry in the trophoblast of animals with severe placentitis and in the mitral valve of animals with myocarditis. The microscopical lesions observed in the tissues of the infected dolphins were similar to those of chronic brucellosis in man. The severity of brucellosis in S. coeruleoalba indicates that this dolphin species is highly susceptible to infection by B. ceti. Copyright 2009 Elsevier Ltd. All rights reserved.

  13. Explanation of the nature of stripe magnetic anomalies without inversions

    Science.gov (United States)

    Melikhov, Vjacheslav; Lygin, Ivan; Sokolova, Tatiana

    2014-05-01

    Several scientists of different branches express doubts on the validity of the Earth's geomagnetic field inversions hypothesis [Vine F.J., Matthews D.H, 1963]. Presently a lot of information allows to link the appearance of stripe magnetic anomalies of both signs with the spreading fracture structure (horizontal segmentation of intrusions and sills, breaks in the strong crust, vertical movements of blocks), remagnetization near the borders of the blocks, hydrothermal activity. Non-inversion mechanism of origin of linear stripe magnetic anomalies in the oceans could be explained as follows. Ascending asthenospheric flows have been enrich with volatile components, become thinner, pressure on the walls of the lithospheric plates grows and part them. When it approaches the surface: - horizontal tensile pressure grows, - lithostatic pressure in the vertical column of rocks decreases, - crust strong upper layer flakes away and begins to move horizontally. It is important that thin magmatic and magnetic layers (further layers) of the newly formed strong upper crust move away from the ridge axis. The structure of such layers forms by horizontal stresses and so consist of the hills and depressions sequences or updiped and downdiped blocks heaped each other. This layer is the main source of the magnetic field and cannot be approximated by a horizontal homogeneous plate as it proved before. In the mid-ocean ridges (MOR) the folding periods of layer depend on its thickness and rigidity and horizontal velocity of spreading. The higher velocity - the longer periods of roughness are and contrary. Same pattern is observed for the stripe magnetic anomalies distribution. The magnetic field of the MOR forms there due to young lava flows which get thermoremanent magnetization according the current direction of geomagnetic field. Partial destruction of the relief, overlaying and creation of the new shapes occur when new magma penetrates the moved magnetic layer. The process entails

  14. Achieving high survival of tournament-caught black bass: past efforts and future needs and opportunities

    Science.gov (United States)

    Schramm, Harold; Gilliland, Gene

    2015-01-01

    Rapid growth of black bass (Micropterus spp.) tournaments in the 1960s and 1970s caused concern among fisheries managers and anglers about the impacts of tournament-caused mortality on bass populations. Tournament organizers voluntarily implemented live-release events in the early 1980s. As catch-and-release practices became more common, procedures to improve the survival of tournament-caught fish were developed and have evolved. The objectives of this paper are to review education and outreach efforts to improve survival of tournament-caught black bass, suggest research needs and opportunities to achieve greater survival, and show the relevance of high survival to contemporary black bass management. Since 1985, a succession of informational products describing those techniques have been developed and distributed to anglers. Although research has confirmed the effectiveness of the recommended procedures and documented that angler and tournament organizer behavior has changed and the survival of tournament-caught black bass has increased, the impacts of the outreach efforts on tournament practices have not been quantified. Continued efforts towards increasing angler awareness of proper handling techniques may benefit from better communication, endorsement by professional anglers, and the use of incentives by state agencies to encourage better fish care.

  15. Diamagnetic vortex barrier stripes in underdoped BaFe2(As1-xPx) 2

    Science.gov (United States)

    Yagil, A.; Lamhot, Y.; Almoalem, A.; Kasahara, S.; Watashige, T.; Shibauchi, T.; Matsuda, Y.; Auslaender, O. M.

    2016-08-01

    We report magnetic force microscopy (MFM) measurements on underdoped BaFe2(As1 -xPx)2 (x =0.26 ) that show enhanced superconductivity along stripes parallel to twin boundaries. These stripes of enhanced diamagnetic response repel superconducting vortices and act as barriers for them to cross. The width of the stripes is hundreds of nanometers, on the scale of the penetration depth, well within the inherent spatial resolution of MFM and implying that the width is set by the interaction of the superconductor with the MFM's magnetic tip. Unlike similar stripes observed previously by scanning SQUID in the electron doped Ba (Fe1 -xCox)2As2 , the stripes in the isovalently doped BaFe2(As1 -xPx)2 disappear gradually when we warm the sample towards the superconducting transition temperature. Moreover, we find that the stripes move well below the reported structural transition temperature in BaFe2(As1 -xPx)2 and that they can be much denser than in the Ba (Fe1 -xCox)2As2 study. When we cool in finite magnetic field we find that some vortices appear in the middle of stripes, suggesting that the stripes may have an inner structure, which we cannot resolve. Finally, we use both vortex decoration at higher magnetic field and deliberate vortex dragging by the MFM magnetic tip to obtain bounds on the strength of the interaction between the stripes and vortices. We find that this interaction is strong enough to play a significant role in determining the critical current in underdoped BaFe2(As1 -xPx)2 .

  16. Study of combined filter based on wavelet transform to denoise stripe images of electronic speckle shearography pattern interferometry

    Science.gov (United States)

    Liu, Zhongling; Jing, Chao; Zhang, Yimo

    2011-11-01

    Stripe images of electronic speckle shearography pattern interferometry, in which stripe distribution are correlated with vertical micro distortion or micro vibration of objects, are severely disturbed by noises, and so denoising stripe images of electronic speckle shearography pattern interferometry is necessary to extract useful stripe distribution information. Denoising methods and flow for stripe images of electronic speckle shearography pattern interferometry are analyzed in this paper to get the stripe distribution correlated with vertical micro distortion or micro vibration of objects. The noises in the stripe images of electronic speckle shearography pattern interferometry are comprised of speckle noise and other random noises induced by environmental disturb and instrumental performance, so it's difficult to use familiar filters, such as mean-value filter, medium-value filter and adaptive filter, etc, to remove all noises in the stripe images. The combined filter composed of mean-value filter and wavelet filter is designed to denoise stripe images. The aim of mean-value filter is to remove random noises induced by environmental disturb and instrumental performance, and then the wavelet filter, in which the Meyer wavelet is adopted, is designed to remove speckle noise in the stripe images. The final stripe distribution images after denoising and binarization are listed to prove the denoising validity of combined filter based on wavelet transform.

  17. Rogue wave and a pair of resonance stripe solitons to a reduced (3+1)-dimensional Jimbo-Miwa equation

    Science.gov (United States)

    Zhang, Xiaoen; Chen, Yong

    2017-11-01

    In this paper, a combination of stripe soliton and lump soliton is discussed to a reduced (3+1)-dimensional Jimbo-Miwa equation, in which such solution gives rise to two different excitation phenomena: fusion and fission. Particularly, a new combination of positive quadratic functions and hyperbolic functions is considered, and then a novel nonlinear phenomenon is explored. Via this method, a pair of resonance kink stripe solitons and rogue wave is studied. Rogue wave is triggered by the interaction between lump soliton and a pair of resonance kink stripe solitons. It is exciting that rogue wave must be attached to the stripe solitons from its appearing to disappearing. The whole progress is completely symmetry, the rogue wave starts itself from one stripe soliton and lose itself in another stripe soliton. The dynamic properties of the interaction between one stripe soliton and lump soliton, rogue wave are discussed by choosing appropriate parameters.

  18. Population structure and dynamics of northern pike and smallmouth bass in Coeur d’Alene Lake, Idaho.

    Science.gov (United States)

    Walrath, John D.; Quist, Michael C.; Firehammer, Jon A.

    2015-01-01

    Numerous species have been introduced to Coeur d'Alene Lake, Idaho over the last century, but minimal research has been completed to understand their population dynamics. The objective of this study was to describe the population demographics and dynamics of northern pike (Esox lucius) and smallmouth bass (Micropterus dolomieu), two important nonnative sport fishes in the system to provide information that will assist with guiding management decisions. The oldest northern pike was age 7 and the oldest smallmouth bass was age 11. Populations of both species exhibited very stable recruitment with a recruitment coefficient of determination of 0.99 for northern pike and 0.98 for smallmouth bass. Total annual mortality was estimated as 66% for northern pike and 42% for smallmouth bass. Growth of northern pike in Coeur d'Alene Lake was comparable to the 50–75th percentiles of growth exhibited by lentic northern pike populations across North America. Northern pike in Coeur d'Alene Lake were most similar to populations in the north-central and northeast United States with fast growth rates and short life spans. In contrast, smallmouth bass grew slowly and generally fell within the 5th percentile of lentic smallmouth bass populations in North America. Smallmouth bass in Coeur d'Alene Lake were similar to other populations in northern regions of the United States displaying slow growth rates with high longevity. Results of this study provide important insight on nonnative northern pike and smallmouth bass population dynamics.

  19. Magnetic stripes and holes: Complex domain patterns in perforated films with weak perpendicular anisotropy

    Directory of Open Access Journals (Sweden)

    F. Valdés-Bango

    2017-05-01

    Full Text Available Hexagonal antidot arrays have been patterned on weak perpendicular magnetic anisotropy NdCo films by e-beam lithography and lift off. Domain structure has been characterized by Magnetic Force Microscopy at remanence. On a local length scale, of the order of stripe pattern period, domain configuration is controlled by edge effects within the stripe pattern: stripe domains meet the hole boundary at either perpendicular or parallel orientation. On a longer length scale, in-plane magnetostatic effects dominate the system: clear superdomains are observed in the patterned film with average in-plane magnetization along the easy directions of the antidot array, correlated over several antidot array cells.

  20. Magnetic stripes and holes: Complex domain patterns in perforated films with weak perpendicular anisotropy

    Science.gov (United States)

    Valdés-Bango, F.; Vélez, M.; Alvarez-Prado, L. M.; Alameda, J. M.; Martín, J. I.

    2017-05-01

    Hexagonal antidot arrays have been patterned on weak perpendicular magnetic anisotropy NdCo films by e-beam lithography and lift off. Domain structure has been characterized by Magnetic Force Microscopy at remanence. On a local length scale, of the order of stripe pattern period, domain configuration is controlled by edge effects within the stripe pattern: stripe domains meet the hole boundary at either perpendicular or parallel orientation. On a longer length scale, in-plane magnetostatic effects dominate the system: clear superdomains are observed in the patterned film with average in-plane magnetization along the easy directions of the antidot array, correlated over several antidot array cells.

  1. Mouth Bar Formation in Yangtze River Estuary

    NARCIS (Netherlands)

    Wei, C.

    2002-01-01

    The periodic shifting of the bifurcation point of the North Channel and South Channel of the Yangtze river is very important in the estuary. The North Channel is bifurcated from the South Branch by cutting a channel through the submerged sandbanks. Once a bifurcation channel is formed, the

  2. Carbon dioxide emissions from Indian monsoonal estuaries

    Digital Repository Service at National Institute of Oceanography (India)

    Sarma, V.V.S.S.; Viswanadham, R.; Rao, G.D.; Prasad, V.R.; Kumar, B.S.K.; Naidu, S.A.; Kumar, N.A.; Rao, D.B.; Sridevi, T.; Krishna, M.S.; Reddy, N.P.C.; Sadhuram, Y.; Murty, T.V.R.

    estuarine system, the Pearl River Estuary, China. J. Geophys. Res., 114, G03013, doi: 10.1029/2008JG000905. Hunt, C.W., J.E. Salisbury, D. Vandemark, and W. McGillis (2010). Contrasting carbon dioxide inputs and exchange in three adjacent New England...

  3. BCG Approaches for Improved Management of Estuaries

    Science.gov (United States)

    Estuaries and other complex aquatic systems are exposed to a variety of stressors that act at several scales, but are managed piecemeal - - often resulting in a “death by 1000 cuts” caused by cumulative impacts to these valued resources. To address this, managers need tools that...

  4. Flushing characteristics of Mahim river estuary (Bombay)

    Digital Repository Service at National Institute of Oceanography (India)

    Sabnis, M.M.; Zingde, M.D.

    to the influence of wastewater. Flushing time of 19 tidal cycles was estimated by applying modified tidal prism method. After a large number of tidal cycles the estuary would retain 9.3x10 super(4) m super(3) of wastewater which was over 15% of the spring high tide...

  5. Computation of gravity currents in estuaries

    NARCIS (Netherlands)

    Vreugdenhil, C.B.

    1970-01-01

    A great deal of literature has been devoted to gravity currents in estuaries. However, more or less detailed theoretical models of these phenomena are scarce. This is partly due to the fact that the equations have been difficult to solve if they describe the situation with some generality. This

  6. Mercury enrichment in sediments of Amba estuary

    Digital Repository Service at National Institute of Oceanography (India)

    Ram, A.; Rokade, M.A.; Zingde, M.D.

    Concentrations of Hg, total organic carbon (TOC), Al, Fe and Mn were determined in sediment of the Amba Estuary between the mouth and the head over a distance of 24 km in December and May during 1997-2002. Temporal and spatial changes in metal...

  7. Influence of estuaries on shelf sediment texture

    Digital Repository Service at National Institute of Oceanography (India)

    Nair, R.R.; Hashimi, N.H.

    on the coast. Offshore from regions where there are a large number of estuaries, the inner shelf sediments are fine grained (average mean size 5.02 phi, 0.03 mm), rich in organic matter ( 2%) and low in calcium carbonate ( 25%). In contrast, in regions...

  8. Features at some significant estuaries of India

    Digital Repository Service at National Institute of Oceanography (India)

    Bhattathiri, P.M.A.

    in the second and 162 in the third. Most of the studies on various aspects have been confined to very few of these, and that too, mostly to minor ones. Very little work has been carried out from many of the estuaries of the major rivers. An overview...

  9. THE ECOLOGICAL CONDITION OF VERACRUZ, MEXICO ESTUARIES

    Science.gov (United States)

    During June and July, 2002, forty-seven stations were sampled within estuaries along the gulf coast of the state of Veracruz, MX, using a probabilistic survey design and a common set of response indicators. The objective of the study was to collect information to assess the condi...

  10. Kaua'i: Streams and Estuaries.

    Science.gov (United States)

    Hawkins, John, Ed.; Murakami, Colleen, Ed.

    Designed to help teachers develop students' awareness and understanding of some of Hawaii's endangered aquatic resources, this module contains activities and instructional suggestions for use with intermediate as well as high school students. The module is divided into two sections which explore the streams and estuaries of Kauai. Activities in…

  11. Nutrient cycling and foodwebs in Dutch estuaries

    NARCIS (Netherlands)

    Nienhuis, P.H.

    1993-01-01

    In this review several aspects of the functioning of the Dutch estuaries (Ems-Dollard, Wadden Sea, Oosterschelde, Westerschelde, Grevelingen and Veerse Meer) have been compared. A number of large European rivers (especially Rhine) have a prevailing influence on the nutrient cycling of most Dutch

  12. Estuaries and Tidal Marshes. Habitat Pac.

    Science.gov (United States)

    Fish and Wildlife Service (Dept. of Interior), Washington, DC.

    This educational packet consists of an overview, three lesson plans, student data sheets, and a poster. The overview examines estuaries and tidal or salt marshes by discussing the plants and animals in these habitats, marsh productivity, benefits and management of the habitats, historical aspects, and development and pollution. A glossary and list…

  13. Comparison of electrofishing and rotenone for sampling largemouth bass in vegetated areas of two Florida lakes

    Science.gov (United States)

    Tate, W.B.; Allen, M.S.; Myers, R.A.; Estes, J.R.

    2003-01-01

    We compared the sampling precision and efficiency of electrofishing and rotenone for assessing populations of largemouth bass Micropterus salmoides in vegetated portions of two Florida lakes. Sampling was conducted at Lochloosa and Orange lakes in north-central Florida from 1990 to 1999. Significant differences in length frequencies were determined between the two methods in 5 of 9 years for each lake. In years where differences existed, electrofishing collected larger fish than did rotenone. The maximum deviation between cumulative relative length frequencies for the two methods was not related to total vegetation, native emergent vegetation, or hydrilla Hydrilla verticallata coverage at either lake. Sampling precision was greater for electrofishing than for rotenone; electrofishing also required less sampling effort to detect changes in the abundance of juvenile and adult largemouth bass. Electrofishing was a more precise and cost-effective method than rotenone for estimating largemouth bass abundance.

  14. DIET AND REPRODUCTION OF LARGEMOUTH BASS IN A RECENTLY INTRODUCED POPULATION, LAKE BRACCIANO (CENTRAL ITALY

    Directory of Open Access Journals (Sweden)

    MARINELLI A.

    2007-04-01

    Full Text Available This paper concerns a study of some aspects of largemouth bass ecology in an Italian lake (Lake Bracciano. We assessed the success and possible impact of its recent introduction (1998 upon the fish community. From October 2001 to September 2002, 162 individuals were caught, measured, aged and submitted to biopsy (stomach and gonads were removed. Four age classes, from 0 + to 3 +, were observed in the population. Largemouth bass feeding activity was high in June, mostly eating fish (55.7%, crustaceans (in particular Palaemonetes antennarius, 37.5%, insects (4.5% and molluscs (2.3%. The G.S.I. values showed an autumnal breeding period (from December to February rather than the spring-summer one frequently described in North America. Moreover, bass attained sexual maturity during the second year of life (1 +. These differences could be related to its recent introduction and the apparent success could represent a problem for other species in the Lake.

  15. Saul Bass et Alfred Hitchcock : trois mariages et un enterrement

    OpenAIRE

    Berthomé, Jean-Pierre

    2012-01-01

    Alfred Hitchcock n’a collaboré avec le fameux créateur de génériques Saul Bass que pour trois films seulement, mais cette brève association marque un sommet incontesté de l’art du générique. Après avoir étudié la contribution de Bass aux génériques de Vertigo (1958) et de North by Northwest (1959), l’article examine en détail le cas de Psycho (1960) et particulièrement la polémique concernant la possible responsabilité de Bass dans les scènes essentielles du meurtre sous la douche et de la mo...

  16. Combining telephone surveys and fishing catches self-report: the French sea bass recreational fishery assessment.

    Directory of Open Access Journals (Sweden)

    Delphine Rocklin

    Full Text Available Fisheries statistics are known to be underestimated, since they are mainly based on information about commercial fisheries. However, various types of fishing activities exist and evaluating them is necessary for implementing effective management plans. This paper assesses the characteristics and catches of the French European sea bass recreational fishery along the Atlantic coasts, through the combination of large-scale telephone surveys and fishing diaries study. Our results demonstrated that half of the total catches (mainly small fish were released at sea and that the mean length of a kept sea bass was 46.6 cm. We highlighted different patterns of fishing methods and type of gear used. Catches from boats were greater than from the shore, both in abundance and biomass, considering mean values per fishing trip as well as CPUE. Spearfishers caught the highest biomass of sea bass per fishing trip, but the fishing rod with lure was the most effective type of gear in terms of CPUE. Longlines had the highest CPUE value in abundance but not in biomass: they caught numerous but small sea bass. Handlines were less effective, catching few sea bass in both abundance and biomass. We estimated that the annual total recreational sea bass catches was 3,173 tonnes of which 2,345 tonnes were kept. Since the annual commercial catches landings were evaluated at 5,160 tonnes, recreational landings represent 30% of the total fishing catches on the Atlantic coasts of France. Using fishers' self-reports was a valuable way to obtain new information on data-poor fisheries. Our results underline the importance of evaluating recreational fishing as a part of the total amount of fisheries catches. More studies are critically needed to assess overall fish resources caught in order to develop effective fishery management tools.

  17. Striped Marlin Hardparts and Gonads Collected by the PIRO Hawaii Longline Observer Program

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Compilation of all samples collected from striped marlin (Tetrapturus audax) collected and brought to the Aiea Heights Research Facility by the PIRO Hawaii Longline...

  18. Genetic analysis and location of gene for resistance to stripe rust in ...

    Indian Academy of Sciences (India)

    2013-08-06

    yellow) rust. It is very important to clarify its genetic character of resistance to stripe rust and to develop the molecular markers linked to resistance genes. The NIL Taichung. 29*6/Strubes Dickkopf, which was obtained by ...

  19. Nonlocal Electron-Phonon Interaction as a Source of Dynamic Charge Stripes in the Cuprates

    Directory of Open Access Journals (Sweden)

    Claus Falter

    2012-01-01

    small pockets with reduced doping. We argue that the incompressibility of the orbital and simultaneously the compressibility of the orbital in the pseudogap state seem to be required to nucleate dynamic stripes.

  20. Improving sustainability of striped catfish (Pangasianodon hypophthalmus) farming in the Mekong Delta, Vietnam through recirculation technology

    NARCIS (Netherlands)

    Nguyen, Nhut

    2016-01-01

    The aim of this thesis was to document improvements in sustainability indicators of striped catfish (Pangasianodon hypophthalmus, Sauvage, 1878) production through the application of recirculation and waste treatment techniques. To be able to document improvements in sustainability, in each system

  1. Quantity and functionality of protein fractions in chicken breast fillets affected by white striping

    National Research Council Canada - National Science Library

    Mudalal, S; Babini, E; Cavani, C; Petracci, M

    2014-01-01

    ... features of chicken breast meat. During this study, a total of 12 pectoralis major muscles from both normal and white striped fillets were used to evaluate chemical composition, protein solubility...

  2. Yr32 for resistance to stripe (yellow) rust present in the wheat cultivar Carstens V

    DEFF Research Database (Denmark)

    Eriksen, L.; Afshari, F.; Christiansen, M.J.

    2004-01-01

    Stripe or yellow rust of wheat, caused by Puccinia striiformis f. sp. tritici, is an important disease in many wheat-growing regions of the world. A number of major genes providing resistance to stripe rust have been used in breeding, including one gene that is present in the differential tester...... Carstens V. The objective of this study was to locate and map a stripe rust resistance gene transferred from Carstens V to Avocet S and to use molecular tools to locate a number of genes segregating in the cross Savannah/Senat. One of the genes present in Senat was predicted to be a gene that is present...... in Carstens V. For this latter purpose, stripe rust response data from both seedling and field tests on a doubled haploid population consisting of 77 lines were compared to an available molecular map for the same lines using a non-parametric quantitative trait loci (QTL) analysis. Results obtained in Denmark...

  3. Swimming muscles power suction feeding in largemouth bass

    Science.gov (United States)

    Camp, Ariel L.; Roberts, Thomas J.; Brainerd, Elizabeth L.

    2015-01-01

    Most aquatic vertebrates use suction to capture food, relying on rapid expansion of the mouth cavity to accelerate water and food into the mouth. In ray-finned fishes, mouth expansion is both fast and forceful, and therefore requires considerable power. However, the cranial muscles of these fishes are relatively small and may not be able to produce enough power for suction expansion. The axial swimming muscles of these fishes also attach to the feeding apparatus and have the potential to generate mouth expansion. Because of their large size, these axial muscles could contribute substantial power to suction feeding. To determine whether suction feeding is powered primarily by axial muscles, we measured the power required for suction expansion in largemouth bass and compared it to the power capacities of the axial and cranial muscles. Using X-ray reconstruction of moving morphology (XROMM), we generated 3D animations of the mouth skeleton and created a dynamic digital endocast to measure the rate of mouth volume expansion. This time-resolved expansion rate was combined with intraoral pressure recordings to calculate the instantaneous power required for suction feeding. Peak expansion powers for all but the weakest strikes far exceeded the maximum power capacity of the cranial muscles. The axial muscles did not merely contribute but were the primary source of suction expansion power and generated up to 95% of peak expansion power. The recruitment of axial muscle power may have been crucial for the evolution of high-power suction feeding in ray-finned fishes. PMID:26100863

  4. European sea bass, Dicentrarchus labrax, in a changing ocean

    Science.gov (United States)

    Pope, E. C.; Ellis, R. P.; Scolamacchia, M.; Scolding, J. W. S.; Keay, A.; Chingombe, P.; Shields, R. J.; Wilcox, R.; Speirs, D. C.; Wilson, R. W.; Lewis, C.; Flynn, K. J.

    2014-05-01

    Ocean acidification, caused by rising concentrations of carbon dioxide (CO2), is widely considered to be a major global threat to marine ecosystems. To investigate the potential effects of ocean acidification on the early life stages of a commercially important fish species, European sea bass (Dicentrarchus labrax), 12 000 larvae were incubated from hatch through metamorphosis under a matrix of two temperatures (17 and 19 °C) and two seawater pCO2 levels (ambient and 1,000 μatm) and sampled regularly for 42 days. Calculated daily mortality was significantly affected by both temperature and pCO2, with both increased temperature and elevated pCO2 associated with lower daily mortality and a significant interaction between these two factors. There was no significant pCO2 effect noted on larval morphology during this period but larvae raised at 19 °C possessed significantly larger eyes and lower carbon:nitrogen ratios at the end of the study compared to those raised under 17 °C. Similarly, when the incubation was continued to post-metamorphic (juvenile) animals (day 67-69), fish raised under a combination of 19 °C and 1000 μatm pCO2 were significantly heavier. However, juvenile D. labrax raised under this combination of 19 °C and 1000 μatm pCO2 also exhibited lower aerobic scopes than those incubated at 19 °C and ambient pCO2. Most studies investigating the effects of near-future oceanic conditions on the early life stages of marine fish have used incubations of relatively short durations and suggested that these animals are resilient to ocean acidification. Whilst the increased survival and growth observed in this study supports this view, we conclude that more work is required to investigate whether the differences in juvenile physiology observed in this study manifest as negative impacts in adult fish.

  5. Unusual sighting of a striped dolphin (Stenella coeruleoalba) in the Kvarnerić, Northern Adriatic sea

    OpenAIRE

    Bearzi, Giovanni; Fortuna, Caterina Maria; Notabartolo di Sciara, Giuseppe

    1998-01-01

    An adult striped dolphin, Stenella coeruleoalba, was encountered east of the island of Lošinj on 6 May 1996, and observed from a small inflatable boat for 5 hours. The only cetacean species that has been consistently observed in the Northern Adriatic Sea in the last decades is the bottlenose dolphin, Tursiops truncatus. Occasional reports of striped dolphins in the Central and Northern Adriatic Sea may simply reflect the occurrence of stray individuals, but the fact that such observations ...

  6. Propagation of dark stripe beams in nonlinear media: Snake instability and creation of optical vortices

    DEFF Research Database (Denmark)

    Mamaev, A.V.; Saffman, M.; Zozulya, A.A.

    1996-01-01

    We analyze the evolution of (1+1) dimensional dark stripe beams in bulk media with a photorefractive nonlinear response. These beams, including solitary wave solutions, are shown to be unstable with respect to symmetry breaking and formation of structure along the initially homogeneous coordinate....... Experimental results show the complete sequence of events starting from self-focusing of the stripe, its bending due to the snake instability, and subsequent decay into a set of optical vortices....

  7. Plankton composition in two estuaries of the Konkan coast during premonsoon season

    Digital Repository Service at National Institute of Oceanography (India)

    Achuthankutty, C.T.; Nair, S.R.S.; Devassy, V.P.; Nair, V.R.

    abundant at the mouth region. Zooplankton biomass was relatively high in the Kajvi Estuary and all the major groups occurred in high density throughout this estuary. In the Shastri Estuary, the zooplankton biomass was relatively lower and all the major...

  8. Seasonal variability in penaeid prawn larval abundance in the Mandovi and Zuari estuaries, Goa

    Digital Repository Service at National Institute of Oceanography (India)

    Goswami; Goswami

    of postlarvae in the estuaries was observed mostly during southwest monsoon months (June to September). Penaeid prawn larval ingression was more in the Zuari Estuary compared to the Mandovi Estuary. Their numerical abundance gradually decreased towards...

  9. 78 FR 9887 - Proposed Information Collection; Comment Request; National Estuaries Restoration Inventory

    Science.gov (United States)

    2013-02-12

    ... Estuaries Restoration Inventory AGENCY: National Oceanic and Atmospheric Administration (NOAA), Commerce... extension of a currently approved information collection. Collection of estuary habitat restoration project... to populate a restoration project database mandated by the Estuary Restoration Act of 2000. The...

  10. Second International Symposium on the Biogeochemistry of Model Estuaries: Estuarine processes in global change. Final report

    Energy Technology Data Exchange (ETDEWEB)

    Windom, H.L.

    1991-12-31

    This report summarizes estuary events discussed at the symposium on biogeochemistry. Topics include; sedimentation, salinity, inputs and outputs of the estuary, effects of global change, and the need for effective sampling and modeling of estuaries.

  11. Are stripes beneficial? Dazzle camouflage influences perceived speed and hit rates.

    Directory of Open Access Journals (Sweden)

    Bettina von Helversen

    Full Text Available In the animal kingdom, camouflage refers to patterns that help potential prey avoid detection. Mostly camouflage is thought of as helping prey blend in with their background. In contrast, disruptive or dazzle patterns protect moving targets and have been suggested as an evolutionary force in shaping the dorsal patterns of animals. Dazzle patterns, such as stripes and zigzags, are thought to reduce the probability with which moving prey will be captured by impairing predators' perception of speed. We investigated how different patterns of stripes (longitudinal-i.e., parallel to movement direction-and vertical-i.e., perpendicular to movement direction affect the probability with which humans can hit moving objects and if differences in hitting probability are caused by a misperception of speed. A first experiment showed that longitudinally striped objects were hit more often than unicolored objects. However, vertically striped objects did not differ from unicolored objects. A second study examining the link between perceived speed and hitting probability showed that longitudinally and vertically striped objects were both perceived as moving faster and were hit more often than unicolored objects. In sum, our results provide evidence that striped patterns disrupt the perception of speed, which in turn influences how often objects are hit. However, the magnitude and the direction of the effects depend on additional factors such as speed and the task setup.

  12. Niche specificities of eleotrid fishes in a tropical estuary

    OpenAIRE

    Nordlie, Frank G.

    2016-01-01

    Five species belonging to the teleost fish family Eleotridae (sleepers) are known to coexist in the Tortuguero estuary of Caribbean Costa Rica and adjacent estuaries. Three of these forms, Dormitator maculatus, Eleotris amblyopsis, and Gobiomorus dormitor are found amongst the root masses of water hyacinths along the borders of the lower estuary. The study was carried out to determine how these forms divide their environmental resources to avoid competition. Field investigations were carried ...

  13. Structural lability of Barley stripe mosaic virus virions.

    Directory of Open Access Journals (Sweden)

    Valentin V Makarov

    Full Text Available Virions of Barley stripe mosaic virus (BSMV were neglected for more than thirty years after their basic properties were determined. In this paper, the physicochemical characteristics of BSMV virions and virion-derived viral capsid protein (CP were analyzed, namely, the absorption and intrinsic fluorescence spectra, circular dichroism spectra, differential scanning calorimetry curves, and size distributions by dynamic laser light scattering. The structural properties of BSMV virions proved to be intermediate between those of Tobacco mosaic virus (TMV, a well-characterized virus with rigid rod-shaped virions, and flexuous filamentous plant viruses. The BSMV virions were found to be considerably more labile than expected from their rod-like morphology and a distant sequence relation of the BSMV and TMV CPs. The circular dichroism spectra of BSMV CP subunits incorporated into the virions, but not subunits of free CP, demonstrated a significant proportion of beta-structure elements, which were proposed to be localized mostly in the protein regions exposed on the virion outer surface. These beta-structure elements likely formed during virion assembly can comprise the N- and C-terminal protein regions unstructured in the non-virion CP and can mediate inter-subunit interactions. Based on computer-assisted structure modeling, a model for BSMV CP subunit structural fold compliant with the available experimental data was proposed.

  14. Current Insights into Research on Rice stripe virus

    Directory of Open Access Journals (Sweden)

    Won Kyong Cho

    2013-09-01

    Full Text Available Rice stripe virus (RSV is one of the most destructive viruses of rice, and greatly reduces rice production in China, Japan, and Korea, where mostly japonica cultivars of rice are grown. RSV is transmitted by the small brown plant-hopper (SBPH in a persistent and circulative-propagative manner. Several methods have been developed for detection of RSV, which is composed of four single-stranded RNAs that encode seven proteins. Genome sequence data and comparative phylogenetic analysis have been used to identify the origin and diversity of RSV isolates. Several rice varieties resistant to RSV have been selected and QTL analysis and fine mapping have been intensively performed to map RSV resistance loci or genes. RSV genes have been used to generate several genetically modified transgenic rice plants with RSV resistance. Recently, genome-wide transcriptome analyses and deep sequencing have been used to identify mRNAs and small RNAs involved in RSV infection; several rice host factors that interact with RSV proteins have also been identified. In this article, we review the current statues of RSV research and propose integrated approaches for the study of interactions among RSV, rice, and the SBPH.

  15. Strategies for Wheat Stripe Rust Pathogenicity Identified by Transcriptome Sequencing.

    Directory of Open Access Journals (Sweden)

    Diana P Garnica

    Full Text Available Stripe rust caused by the fungus Puccinia striiformis f.sp. tritici (Pst is a major constraint to wheat production worldwide. The molecular events that underlie Pst pathogenicity are largely unknown. Like all rusts, Pst creates a specialized cellular structure within host cells called the haustorium to obtain nutrients from wheat, and to secrete pathogenicity factors called effector proteins. We purified Pst haustoria and used next-generation sequencing platforms to assemble the haustorial transcriptome as well as the transcriptome of germinated spores. 12,282 transcripts were assembled from 454-pyrosequencing data and used as reference for digital gene expression analysis to compare the germinated uredinospores and haustoria transcriptomes based on Illumina RNAseq data. More than 400 genes encoding secreted proteins which constitute candidate effectors were identified from the haustorial transcriptome, with two thirds of these up-regulated in this tissue compared to germinated spores. RT-PCR analysis confirmed the expression patterns of 94 effector candidates. The analysis also revealed that spores rely mainly on stored energy reserves for growth and development, while haustoria take up host nutrients for massive energy production for biosynthetic pathways and the ultimate production of spores. Together, these studies substantially increase our knowledge of potential Pst effectors and provide new insights into the pathogenic strategies of this important organism.

  16. Striped lanthanum cobaltite films: how strain orders oxygen defects

    Science.gov (United States)

    Birenbaum, Axiel Yael; Biegalski, Michael D.; Qiao, Liang; Cooper, Valentino R.; Borisevich, Albina

    Oxygen-deficient metal cobalt oxides have been widely studied for solid oxide fuel cell cathode applications. In order to predict atomic-scale transport pathways, a thorough understanding of its defect properties is crucial. Previous studies, including Scanning Transmission Electron Microscopy (STEM), demonstrate lanthanum cobaltite, grown as thin films on [100]pc oriented perovskites, spontaneously order its oxygen vacancies. In this work, we investigate the behavior of LaCoO3 - δ thin films grown on SrTiO3 [111] surface to determine if orientation can be used to shape the anisotropy of oxygen transport. For these films, STEM studies reveal ordered vacancy arrangements. We do so by establishing the structural and electronic properties of LaCoO3 - δ on SrTiO3, using ab initio electronic structure calculations. We then treat how epitaxial strain leads to oxygen vacancies forming these distinctive stripe patterns. The impact of different substrates is addressed. In addition, this leads to an opportunity to discuss the effect of reduced symmetry in oxygen deficient compounds on cobalt oxide behavior compared to the ideal perovskite environment. Research was sponsored by the US DoE, Office of Science, BES, MSED, and used resources at NERSC and OLCF.

  17. Differences in the structure of copepod assemblages in four tropical estuaries: Importance of pollution and the estuary hydrodynamics.

    Science.gov (United States)

    Araujo, Adriana V; Dias, Cristina O; Bonecker, Sérgio L C

    2017-02-15

    We examined the relationship between pollution and structure of copepod assemblages in estuaries, using sampling standardization of salinity range to reduce the effects of "Estuarine Quality Paradox". Copepod assemblages were analyzed in four Southeast Brazilian estuaries with different water quality levels and different hydrodynamic characteristics. The pollution negatively impacted the descriptors of the assemblage structure. The distribution of structure of copepod assemblages also showed a main separation trend between the most polluted estuaries and those less polluted. Temperature was the main factor affecting the assemblage structuring in the four estuaries. This factor acted in synergism with the effects of pollution impact and physical characteristics of the estuaries on the structure of copepod assemblages, supporting the potential vulnerability of coastal environments due to nutrient enrichment associated with climate change. Our study demonstrated the importance of sampling standardization of the salinity range in estuaries for reliable analysis of pollution effects on biota. Copyright © 2016 Elsevier Ltd. All rights reserved.

  18. Gammaridean amphipods in the Columbia River Estuary

    Energy Technology Data Exchange (ETDEWEB)

    Holton, R.L.; Higley, D.L.

    1976-01-01

    The distribution, abundance, and habitat preference of the amphipods Corophium salmonis, C. spinicorne, and Anisogammarus confervicolus were studied in the Columbia River estuary as part of baseline research during 1974 to 1976. A figure is presented showing densities of two species at selected stations in the Columbia River. Studies were also conducted on changes in faunal composition and substrate texture existing across an intertidal mudflat on the southwest shore of Youngs Bay. (HLW)

  19. Do the visual conditions at the point of escape affect European sea bass escape behavior?

    Directory of Open Access Journals (Sweden)

    I.E. PAPADAKIS

    2013-03-01

    Full Text Available European sea bass (Dicentrarchus labrax, an important species for the Mediterranean aquaculture industry, has been reported to escape from sea cage installations. Fish escapes are caused mainly by operational and technical failures that eventually result into a creation of a tear. Escapees may interact with wild stocks through interbreeding, transfer of pathogens and competition for food. The aim of this study was to examine at which extent the presence of a visible obstacle close to a tear on the net have an influence on sea bass propensity to escape. Fish were initially confined into small sea cages, with a tear at one side. The escape behavior was tested under experimental conditions. It is clearly demonstrated that sea bass was able to locate a tear on the net pen, immediately after its appearance. Crossings occurred in all cages, in singles or in a series of up to seven individuals. The presence of an obstacle close to the net tear altered the escape behavior of D. labrax resulting in a delay that eventually reduced the escape rate. Concluding, it is highly recommended that sea bass cages should be kept internally the culture array. Furthermore, the placement of artificial obstacles close to the sea cages could be an efficient practice that mitigates the escape risk after severe environmental conditions.

  20. Description of the semantic potential of the si -construction in Basse ...

    African Journals Online (AJOL)

    The present paper provides a detailed description of the semantic potential offered by the si-construction in Basse Mandinka (a regional variety of the Gambian Mandinka language), by enumerating all temporal, aspectual, taxis and modal values which this verbal form may convey. The study demonstrates that the ...

  1. Indigenous development and performance evaluation of BARC aerodynamic size separator (BASS)

    CERN Document Server

    Singh, S; Khan, A; Mayya, Y S; Narayanan, K P; Purwar, R C; Sapra, B K; Sunny, F

    2002-01-01

    Commercially available cascade impactors, commonly used for aerodynamic size separation of aerosol particles, are based on the principle of inertial impaction. As of now, these instruments are imported at a cost of several lakhs of rupees; hence an effort has been made to develop an aerodynamic particle sizer indigenously in BARC. This unit, referred to as BARC Aerodynamic Size Separator (BASS), separates aerosols into seven size classes ranging from 0.53 mu m to 10 mu m and operates at a flow rate of 45 Ipm. Intercomparison studies between the standard Andersen Mark-II (Grasbey Andersen Inc.) impactor and BASS using nebulizer generated aerosols have consistently shown excellent performance by BASS in all respects. In particular, BASS yielded the parameters of polydisperse aerosols quite accurately. Experiments to evaluate the individual stage cut-off diameters show that these are within 8% of their designed value for all stages except the higher two stages which indicate about 30% lower values than the desig...

  2. On the Bass diffusion theory, empirical models and out-of-sample forecasting

    NARCIS (Netherlands)

    Ph.H.B.F. Franses (Philip Hans)

    2003-01-01

    textabstractThe Bass (1969) diffusion theory often guides the construction of forecasting models for new product diffusion. To match the model with data, one needs to put forward a statistical model. This paper compares four empirical versions of the model, where two of these explicitly incorporate

  3. Movements and behavior of largemouth bass (Micropterus salmoides) and steelhead (Salmo gairdneri) determined by radio telemetry

    Energy Technology Data Exchange (ETDEWEB)

    Winter, J.D.

    1976-08-01

    The organization of this thesis reflects the development of underwater radio tracking methodology for monitoring movements of freshwater fish. Equipment and techniques developed during this research are described in Part I and represent a cooperative effort between the author and the University of Minnesota's Cedar Creek engineering staff. In 1970, the equipment and techniques were tested and perfected during a study of largemouth bass movements in Mary Lake. The bass project provided an ideal situation to test the system. Since Mary Lake was small and the bass exhibited localized movements, the fish could be found easily; consequently, the performance of the system could be continually analyzed and problems could be quickly solved. The home range movements of the bass are described in Part II. After establishing the reliability and usefulness of the system, a much more difficult project was attempted. In 1971, a program was initiated to study the movements and behavior of steelhead in western Lake Superior. Results of this project (1971 to 1974) are presented in Part III.

  4. Northern Gannets in the North Sea: foraging distribution and feeding techniques around the Bass Rock

    NARCIS (Netherlands)

    Camphuysen, K.C.J.

    2011-01-01

    Field observationsaround the largest NorthernGannet Morus bassanuscolony in the North Sea, theBass Rock, showed that 66%of all Gannets foraged inareas with very low densitiesof conspecifics, more than100 km from the colony.When one forager foundprey, even distant Gannetsresponded by joining

  5. Dworshak Reservoir Investigations: Trout, Bass and Forage Species, 1989 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Statler, David P.

    1990-07-01

    The Nez Perce Tribe and the Idaho Department of Fish and Game (IDFG) entered into separate intergovernmental agreements with the Bonneville Power Administration in a cooperative four-year effort to study impacts of Dworshak Dam operation on resident fisheries. This third annual report focuses on rainbow trout, smallmouth bass, and forage species. 22 refs., 19 figs., 11 tabs.

  6. Dworshak Reservoir Investigations: Trout, Bass and Forage Species, 1988 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Statler, David P.

    1989-07-01

    For the period March 1988 through February 1989, an estimated 154,558 angler-hours were expended to catch 20,037 rainbow trout, 3,933 smallmouth bass, and 14 bull trout. Estimated catch of other species, including cutthroat trout, whitefish, suckers, and squawfish totalled 84. Subcatchable rainbow trout (135 to 185mm) caught and released by boat anglers comprised 53% (12,770) of the total catch. An estimated 88.6% of the smallmouth bass caught were under the minimum legal size limit of 305mm and were released. Estimated harvest of smallmouth bass was 450. The highest monthly catch rate documented for all species excluding kokanee was 1.81 fish per hour during October. Severe weather conditions during February reduced effort and no fish were documented in the creel. Cumulative catch rates through the survey period for rainbow trout and smallmouth bass were .13 and .02, respectively. The lowest monthly catch rates generally occurred when fishing pressure was the highest, with fishing effort targeting on kokanee during the May through July high use periods. The Arlee strain rainbow trout was somewhat more vulnerable to boat anglers than the Shasta strain during the early post-release period. 20 refs., 16 figs., 12 tabs.

  7. Development of immunity in sea bass: a study towards vaccination against pseudotuberculosis

    NARCIS (Netherlands)

    Santos, dos N.M.S.

    2000-01-01

    Pseudotuberculosis, caused by the halophilic gram-negative bacterium Photobacterium damselae ssp. piscicida , has been causing high mortality losses in sea bass ( Dicentrarchus labrax L.) farming. In the present thesis, basic

  8. Kortfilmen i filmen : En studie i Saul Bass anpassning av förtexter till det individuella verket.

    OpenAIRE

    Sjöqvist, Karin

    2007-01-01

    In this paper, I have examined if and how Saul Bass adapts his title sequences to the respective film in the matter of genre, plot, milieu, feeling and appearance. Saul Bass was really a graphic artist who has made himself a long career in film production, foremost as a creator of title sequences. Of all the films Bass has created title sequences to, I’ve chosen six films, whose title sequences I analyse more thoroughly. I do this to point out the differences between them and thus also show h...

  9. Amen-break : Från ett samplat trumbreak till nya trumkomp i drum'n'bass-musik.

    OpenAIRE

    Björni, Patrik

    2012-01-01

    Drum’n’bass är en genre inom elektronisk dansmusik som utvecklades under 1990-talet. Genren kännetecknas av rytmiskt komplexa trumkomp. Syftet med detta arbete är att ge en uppfattning av trumkomp, vilka kallas för breakbeats i drum’n’bass-musik. Med hjälp av litteratur har jag forskat i historien om drum’n’bass för att ge en uppfattning om hur genren utvecklades och dess bakgrund. Breakbeats är skapade genom att sampla och bearbeta trumkomp från äldre funk-och soullåtar med elektronisk...

  10. Aplicações da teoria de bass-serre : endomorfismos injetivos de grupos de baumslag-solitar

    OpenAIRE

    Eliana Vieira Norte

    2006-01-01

    Resumo: Nessa dissertação estudamos a teoria de Bass-Serre que liga grupos que agem sobre árvores em grupos fundamentais de grafos de grupos. Para desenvolver essa teoria primeiramente estudamos conceitos básicos como: grupos livres, produto livre amalgamado, extensão HNN. Na parte final a teria de Bass-Serre é aplicada para endomorfismos injetivos de grupos de Baumslag-Solitar. ;;Abstract:ln this master thesis we study Bass-Serre theory that links groups acting on trees and fundamental grou...

  11. Climate-induced seasonal changes in smallmouth bass growth rate potential at the southern range extent

    Science.gov (United States)

    Middaugh, Christopher R.; Kessinger, Brin; Magoulick, Daniel D.

    2018-01-01

    Temperature increases due to climate change over the coming century will likely affect smallmouth bass (Micropterus dolomieu) growth in lotic systems at the southern extent of their native range. However, the thermal response of a stream to warming climate conditions could be affected by the flow regime of each stream, mitigating the effects on smallmouth bass populations. We developed bioenergetics models to compare change in smallmouth bass growth rate potential (GRP) from present to future projected monthly stream temperatures across two flow regimes: runoff and groundwater-dominated. Seasonal differences in GRP between stream types were then compared. The models were developed for fourteen streams within the Ozark–Ouachita Interior Highlands in Arkansas, Oklahoma and Missouri, USA, which contain smallmouth bass. In our simulations, smallmouth bass mean GRP during summer months decreased by 0.005 g g−1 day−1 in runoff streams and 0.002 g g−1 day−1 in groundwater streams by the end of century. Mean GRP during winter, fall and early spring increased under future climate conditions within both stream types (e.g., 0.00019 g g−1 day−1 in runoff and 0.0014 g g−1 day−1 in groundwater streams in spring months). We found significant differences in change in GRP between runoff and groundwater streams in three seasons in end-of-century simulations (spring, summer and fall). Potential differences in stream temperature across flow regimes could be an important habitat component to consider when investigating effects of climate change as fishes from various flow regimes that are relatively close geographically could be affected differently by warming climate conditions.

  12. Néel coupling in Co/Cu/Co stripes with unidirectional interface roughness

    Energy Technology Data Exchange (ETDEWEB)

    Davydenko, A.V., E-mail: avdavydenko@gmail.com [Far Eastern Federal University, 8 Sukhanova Street, Vladivostok 690950 (Russian Federation); Pustovalov, E.V.; Ognev, A.V.; Kozlov, A.G.; Chebotkevich, L.A. [Far Eastern Federal University, 8 Sukhanova Street, Vladivostok 690950 (Russian Federation); Han, X.F. [State Key Laboratory of Magnetism, Institute of Physics, Chinese Academy of Sciences, Beijing (China)

    2015-03-01

    We investigate the influence of interlayer Néel coupling on the magnetization reversal processes in epitaxial Co(5 nm)/Cu(5 nm)/Co(5 nm) stripes by experimental methods and computer modeling. The stripes with a width of 900 and 1800 nm were formed on a step-bunched Si(111) substrate by molecular beam epitaxy and focused ion beam etching. Uniaxial magnetic anisotropy with the easy axis of the magnetization along the steps is induced in the stripes by the steps of the Si(111) substrate. The stepped structure of the layers in the multilayered stripes reproduces the morphology of the Si(111) substrate. Néel coupling between the Co layers is realized due to the unidirectional roughness at the Co/Cu interfaces caused by the steps of the substrate. Interlayer Néel coupling at the interfaces overcomes antiparallel magnetostatic interaction realized through the sides of the Co layers in the trilayered stripes. We used a modified Néel model in the simulation of the magnetization reversal in the multilayered system with unidirectional interface roughness. The surface energy of Néel coupling was spatially varied against the direction of the magnetization relative to the step edge. The results of micromagnetic simulations of the Co/Cu/Co stripes with spatially non-uniform and averaged surface energies of interlayer Néel coupling are compared and discussed. - Highlights: • We investigated Co/Cu/Co stripes with unidirectional roughness at the interfaces. • Results obtained by MOKE and MFM are compared to micromagnetic simulations. • A modified Néel model was used in the micromagnetic simulation of the Co/Cu/Co system. • The surface energy of Néel coupling depends on the direction of the magnetization.

  13. Anechoic stripe size influences accuracy of FAST examination interpretation.

    Science.gov (United States)

    Ma, O John; Gaddis, Gary

    2006-03-01

    Accurate and precise interpretations of Focused Assessment with Sonography for Trauma (FAST) findings are important factors in managing trauma patients. The objectives were to analyze the influence of anechoic stripe (AS) size on interpretation accuracy by emergency physicians (EPs) and to assess the precision of FAST examination interpretation as a function of EP FAST experience. A prospective comparison study of FAST examination interpretation by 11 emergency medicine faculty (FAC), nine community attending EPs (ATT), and nine senior emergency medicine residents (RES) was conducted; these physicians were then divided into more experienced and less experienced cohorts to assess precision. Participants interpreted video recordings of the four standard views from five FAST examinations (20 total video clips); each examination contained views with various AS sizes. Accuracy of FAST examination interpretation was calculated for each group stratified by size of AS. Precision (reproducibility) of FAST examination interpretation was assessed by calculating kappa values. With large, moderate, or no AS, no significant differences in accuracy were found between groups. For small AS, significant differences in accuracy were found between the ATT and RES groups and between the combined FAC + ATT group and the RES group. Kappa was good to excellent when the nth and the (n + 1)th experienced physicians in the more experienced cohort were compared. kappa values reflected that the more experienced cohort was more precise than the less experienced cohort. AS size visible on FAST examinations and EP experience level with FAST examination interpretation exerted a significant influence on the interpretation accuracy of videotaped FAST examinations. In addition, precision was enhanced by increased EP experience with FAST.

  14. THE ROLE OF ESTUARIES IN SOUTH AFRICAN FISHERIES ...

    African Journals Online (AJOL)

    Existing catch data for 129 of 255 functional estuaries on the South African coastline were reviewed and the relationships between fish catch and estuary size, type and biogeographical region analysed using simple and multivariate models. The best predictive models were obtained by analysing data separately for each ...

  15. Phytoplankton/protozoan dynamics in the Nyara Estuary, a small ...

    African Journals Online (AJOL)

    Most estuarine studies in South Africa have focused on larger estuaries, while numerous, smaller, temporarily open estuaries have received little research attention. This study ... Diatoms were most abundant in the water-column in March (mean = 105 cells/l), but numbers declined to below 104 cells/l in May and September.

  16. The hydrodynamics of the Bot River Estuary revisited | van Niekerk ...

    African Journals Online (AJOL)

    It is concluded that the increasingly closed state of the Bot Estuary in recent years is most likely due to reduction in runoff from its tributaries and premature artificial breaching of the Kleinmond arm of the system. These findings, coupled with the high conservation importance of the Bot River Estuary, suggest that the current ...

  17. Isolation and characterization of actinomycetes in vellar estuary ...

    African Journals Online (AJOL)

    Vellar Estuary was investigated as a source of actinomycetes to screen for production of novel bioactive compounds. The presence of relatively large populations of. Streptomyces in Vellar Estuary soil samples indicates that it is an eminently suitable ecosystem for actinomycetes. Actinomycetes counts ranged 12 x 104 cfu/g ...

  18. Estimating bankfull discharge and depth in ungauged estuaries

    NARCIS (Netherlands)

    Gisen, J.I.A.; Savenije, H.H.G.

    2015-01-01

    It is difficult to measure river discharge accurately in an estuary, and particularly, in the region where the tidal flow dominates over the river discharge. River discharge is important for the morphology and hydrodynamics of estuaries as it influences the salt intrusion process, tidal dynamics,

  19. mysidacea of the mtentu river estuary, transkei, south africa

    African Journals Online (AJOL)

    The Mtentu River has a straight open tidal estuary flowing between steep grassy or indigenous forest. covered ... During the entire duration of the study, from February 1971 to March 1972, the estuary was tidal, with a ... gently sloping mudbanks about 10 m wide, bordered by mangrove (Bruguiera gymnorhiza) and hibiscus ...

  20. dissolved oxygen characteristics of the gamtoos estuary, south africa

    African Journals Online (AJOL)

    The fall and recovery of dissolved oxygen (DO) is documented throughout the Gamtoos Estuary, South Africa during dry conditions and following light and heavy rainfall over a 13-month period from November 1992 to November 1993. Hypoxic conditions generally occurred in the near-bottom waters of the upper estuary.

  1. The recreational value of river inflows into South African estuaries ...

    African Journals Online (AJOL)

    The contingent valuation method was used to estimate the value of recreational benefits that would result at 40 South African estuaries if water-inflow reductions were averted. The studies were undertaken between 2000 and 2007. All the estuaries selected were known to be vulnerable to changes in river inflows.

  2. The zooplankton of Msikaba estuary | Wooldridge | African Zoology

    African Journals Online (AJOL)

    Stratification is well developed in Msikaba estuary and has a major influence on the distribution of the zooplankton. The oligohaline zooplankton component does not become well established, while marine zooplankton organisms penetrate relatively far up the estuary in the high salinity bottom waters. The euryhaline ...

  3. mysidacea of the mtentu river estuary, transkei, south africa

    African Journals Online (AJOL)

    The Mtentu River has a straight open tidal estuary flowing between steep grassy or indigenous forest. covered slopes. Total high-water surface area is about 0,3 kin·. The zooplankton was studied by periodic sampling over a period of thirteen months. Some physical characteristics of the estuary are presented. The seasonal ...

  4. The zooplankton of Mgazana, a mangrove estuary in Transkei ...

    African Journals Online (AJOL)

    INTRODUCTION. Mgazana is a mangrove estuary located a short distance south of Port St Johns, Transkei, at latitude 310 42 ' S. These mangroves form one of the most extensive forests (40ha) on the south-east coast and are amongst the most southern in distribution on the African continent. The estuary is in an excellent ...

  5. Fish sampling in the marine-dominated Kariega Estuary, South ...

    African Journals Online (AJOL)

    Very few demersal fish assemblage studies using otter trawls in estuaries have been done in South Africa and none of these have tested for the effects of diel period. This study aimed to test whether diel period affects otter trawl catches in the clear, permanently open Kariega Estuary in terms of both species composition and ...

  6. Analysis of anglers' catch data from the Swartkops estuary

    African Journals Online (AJOL)

    fish species. The University of Port Elizabeth has initiated studies on the nekton of the estuary by means of analysis of anglers' catch data, regular gill and seine netting, and of the larval fish ... important fish taken by anglers in the estuary, both in terms of mass (83% of ..... The nutritional ecology of mullets in the. Swartkops ...

  7. Collaborative Potential between National Estuary Programs and Coastal EPA Laboratories

    Science.gov (United States)

    Estuaries are among the most productive ecosystems in the world, providing unique habitat for freshwater and marine species as well as valuable social and economic benefits. The wealth of ecosystem goods and services from estuaries has led to growth and development of human commu...

  8. Improving navigability on the Kromme River Estuary: A choice ...

    African Journals Online (AJOL)

    2013-03-14

    Mar 14, 2013 ... this difference included different samples of users, as well as the possibility of embedding bias in the derived .... structure, and this annual sum will then be directed back to the Kromme River Estuary. This annual ..... HAY D, HOSKING SG and McKENZIE M (2008) Estuaries,. Economics and Freshwater: An ...

  9. Wind-driven estuarine turbidity maxima in Mandovi Estuary, central ...

    Indian Academy of Sciences (India)

    Transect stations reveal that the SPM at sea-end stations of the estuary are at least two orders of ... and wind-driven waves and currents seem to have acted effectively at the mouth of the estuary in developing .... Location map of the Mandovi River and sampling stations in the river channel. RS – regular station. Numbers.

  10. The branching channel network in the Yangtze Estuary

    NARCIS (Netherlands)

    Wang, Z.B.; Ding, P.X.

    2012-01-01

    The channels in the Yangtze Estuary have an ordered-branching structure: The estuary is first divided by the Chongming Island into the North Branch and the South Branch. Then the South Branch is divided into the North Channel and South Channel by the Islands Changxing and Hengsha. The South Channel

  11. Nature of freshwater influx in Indian estuaries -5mm

    Indian Academy of Sciences (India)

    D Shankar 4mmCollaborator: Suprit Kumar

    2010-11-12

    Nov 12, 2010 ... Modelling discharge. Nature of freshwater influx in Indian estuaries. D Shankar. Collaborator: Suprit Kumar. National Institute of Oceanography,. Dona Paula, Goa 403004 shankar@nio.org http://www.nio.org. Symposium on Indian estuaries. Seventy-sixth annual meeting of the. Indian Academy of Sciences ...

  12. Development of a Spectrophotometric System to Detect White Striping Physiopathy in Whole Chicken Carcasses

    Science.gov (United States)

    Traffano-Schiffo, Maria Victoria; Castro-Giraldez, Marta; Colom, Ricardo J.; Fito, Pedro J.

    2017-01-01

    Due to the high intensification of poultry production in recent years, white chicken breast striping is one of the most frequently seen myopathies. The aim of this research was to develop a spectrophotometry-based sensor to detect white striping physiopathy in chicken breast meat in whole chicken carcasses with skin. Experiments were carried out using normal and white striping breasts. In order to understand the mechanism involved in this physiopathy, the different tissues that conform each breast were analyzed. Permittivity in radiofrequency (40 Hz to 1 MHz) was measured using two different sensors; a sensor with two flat plates to analyze the whole breast with skin (NB or WSB), and a two needles with blunt-ended sensor to analyze the different surface tissues of the skinless breast. In the microwave range (500 MHz to 20 GHz), permittivity was measured as just was described for the two needles with blunt-ended sensor. Moreover, fatty acids composition was determined by calorimetry techniques from −40 °C to 50 °C at 5 °C/min after previously freeze-drying the samples, and pH, microstructure by Cryo-SEM and binocular loupe structure were also analyzed. The results showed that the white striping physiopathy consists of the partial breakdown of the pectoral muscle causing an increase in fatty acids, reducing the quality of the meat. It was possible to detect white striping physiopathy in chicken carcasses with skin using spectrophotometry of radiofrequency spectra. PMID:28471378

  13. Stripe artifact elimination based on nonsubsampled contourlet transform for light sheet fluorescence microscopy

    Science.gov (United States)

    Liang, Xiao; Zang, Yali; Dong, Di; Zhang, Liwen; Fang, Mengjie; Yang, Xin; Arranz, Alicia; Ripoll, Jorge; Hui, Hui; Tian, Jie

    2016-10-01

    Stripe artifacts, caused by high-absorption or high-scattering structures in the illumination light path, are a common drawback in both unidirectional and multidirectional light sheet fluorescence microscopy (LSFM), significantly deteriorating image quality. To circumvent this problem, we present an effective multidirectional stripe remover (MDSR) method based on nonsubsampled contourlet transform (NSCT), which can be used for both unidirectional and multidirectional LSFM. In MDSR, a fast Fourier transform (FFT) filter is designed in the NSCT domain to shrink the stripe components and eliminate the noise. Benefiting from the properties of being multiscale and multidirectional, MDSR succeeds in eliminating stripe artifacts in both unidirectional and multidirectional LSFM. To validate the method, MDSR has been tested on images from a custom-made unidirectional LSFM system and a commercial multidirectional LSFM system, clearly demonstrating that MDSR effectively removes most of the stripe artifacts. Moreover, we performed a comparative experiment with the variational stationary noise remover and the wavelet-FFT methods and quantitatively analyzed the results with a peak signal-to-noise ratio, showing an improved noise removal when using the MDSR method.

  14. Relation of age-0 largemouth bass abundance to hydrilla coverage and water level at Lochloosa and Orange Lakes, Florida

    Science.gov (United States)

    Tate, W.B.; Allen, M.S.; Myers, R.A.; Nagid, E.J.; Estes, J.R.

    2003-01-01

    Changes in electrofishing catch per hour (CPH) of age-0 largemouth bass Micropterus salmoides were examined in relation to aquatic macrophytes and seasonal water elevation at Lochloosa and Orange lakes, Florida, during the 1990s. At Lochloosa Lake, stepwise multiple regression revealed a significant positive relationship between the mean CPH of age-0 largemouth bass and the percentage of areal coverage by hydrilla Hydrilla verticallata. At Orange Lake, mean CPH was directly associated with the percentage of areal coverage by hydrilla and inversely related to summer water levels. Thus, the influence of vegetation on age-0 largemouth bass abundance was similar at both lakes, but the effects of water levels were not. Further investigations into the effects of fluctuations in water levels on age-0 largemouth bass in natural lakes are needed.

  15. Combining Telephone Surveys and Fishing Catches Self-Report: The French Sea Bass Recreational Fishery Assessment: e87271

    National Research Council Canada - National Science Library

    Delphine Rocklin; Harold Levrel; Mickaël Drogou; Johanna Herfaut; Gérard Veron

    2014-01-01

    .... This paper assesses the characteristics and catches of the French European sea bass recreational fishery along the Atlantic coasts, through the combination of large-scale telephone surveys and fishing diaries study...

  16. Mercury and selenium concentrations in largemouth bass and other fishes of the Lower Suwannee National Wildlife Refuge

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — From March 22 to April 7, 1990, 71 largemouth bass (Micropterus salmoides) and four other fish species (total of seven fish) were collected from ten locations on or...

  17. Streptococcus iniae infection in cultured Asian sea bass (Lates calcarifer and red tilapia (Oreochromis sp. in southern Thailand

    Directory of Open Access Journals (Sweden)

    Kidchakan Supamattaya

    2010-08-01

    Full Text Available Streptococcal infections are becoming an increasing problem in aquaculture and have been reported worldwide in avariety of fish species. Here we describe the isolation and characterization of Streptococcus iniae from Asian sea bass (Latescalcarifer and red tilapia (Oreochromis sp. cultured in southern Thailand. Conventional and rapid identification systems,as well as the polymerase chain reaction (PCR, were used to determine that the isolate was S. iniae. The virulence of thisS. iniae was higher in Asian sea bass than in red tilapia, as shown by the 10 day-LD50 in Asian sea bass and red tilapia, being1.08x104 and 1.14x107 CFU, respectively. Histopathological changes in Asian sea bass are more severe than those observedin red tilapia. The changes can be found in several organs including liver, pancreas, heart, eye and brain. Histopathologicalfindings included cellular necrosis, infiltration of lymphocytes and granuloma formation in the infected organs.

  18. Widespread occurrence of intersex in black basses (Micropterus spp.) from U.S. rivers, 1995-2004

    Science.gov (United States)

    Hinck, J.E.; Blazer, V.S.; Schmitt, C.J.; Papoulias, D.M.; Tillitt, D.E.

    2009-01-01

    Intersex occurrence in freshwater fishes was evaluated for nine river basins in the United States. Testicular oocytes (predominantly male testes containing female germ cells) were the most pervasive form of intersex observed, even though similar numbers of male (n = 1477) and female (n = 1633) fish were examined. Intersex was found in 3% of the fish collected. The intersex condition was observed in four of the 16 species examined (25%) and in fish from 34 of 111 sites (31%). Intersex was not found in multiple species from the same site but was most prevalent in largemouth bass (Micropterus salmoides; 18% of males) and smallmouth bass (M. dolomieu; 33% of males). The percentage of intersex fish per site was 8-91% for largemouth bass and 14-73% for smallmouth bass. The incidence of intersex was greatest in the southeastern United States, with intersex largemouth bass present at all sites in the Apalachicola, Savannah, and Pee Dee River Basins. Total mercury, trans-nonachlor, p,p???-DDE, p,p???-DDD, and total PCBs were the most commonly detected chemical contaminants at all sites, regardless of whether intersex was observed. Although the genotype of the intersex fish was not determined, the microscopic appearance of the gonads, the presence of mature sperm, and the concentrations of sex steroid hormones and vitellogenin indicate the intersex bass were males. Few reproductive endpoints differed significantly among male and intersex bass; plasma vitellogenin concentration in males was not a good indicator of intersex presence. Hierarchical linkages of the intersex condition to reproductive function will require a more quantitative measure of intersex (e.g. severity index) rather than presence or absence of the condition. The baseline incidence of intersex gonadal tissue in black basses and other freshwater fishes is unknown, but intersex prevalence may be related to collection season, age, and endocrine active compounds in the environment. Intersex was not found in

  19. Greenhouse gas (N2O emission from Portuguese estuaries

    Directory of Open Access Journals (Sweden)

    Célia Gonçalves

    2014-07-01

    Tagus, Minho and Lima estuaries are source of N2O to the atmosphere. Particularly, in Lima estuary anthropogenic N input seems to play an important role on N2O emission. However, in a global perspective N2O attained emissions represent a reduced fraction (2O yr-1, Barnes and Upstill-Goddard, 2011. Values are comparable with those registered in some Portuguese estuaries and other European less eutrophic estuaries. However, it is known that higher N2O emissions in estuaries may occur during winter and spring (Sun et al., 2014. Thus, these systems may represent on an annual basis a larger source of N2O, which can only be clarified in future studies. Only a full comprehension of the global estuarine nitrogen cycle will provide an efficient basis of scientific knowledge for sustainably management of such ecosystems and ultimately reduce N2O emissions.

  20. Tidal fluctuations influence E. coli concentrations in urban estuaries.

    Science.gov (United States)

    Jovanovic, Dusan; Coleman, Rhys; Deletic, Ana; McCarthy, David T

    2017-06-15

    This study investigated the influence of water level and velocity on Escherichia coli levels over multiple tidal cycles in an urban microtidal estuary in Melbourne, Australia. Over 3,500 E. coli samples and high resolution water level and velocity measurements from two locations within the estuary were used for the analysis. E. coli negatively correlated with water level in the upper estuary which was proposed to be linked to increased resuspension of estuarine sediments during low tide. No relationship was found in the lower estuary, likely due to wet weather inputs dwarfing subtler tidal-related processes. Removal of wet weather data enabled significant relationships to emerge in the lower estuary: 1) positive with water level (when a 9-h shift applied corresponding to the phase shift between water levels and velocities) and; 2) positive with velocity (no shift applied). This supports a link between increased E. coli levels and tidal-related resuspension. Copyright © 2017 Elsevier Ltd. All rights reserved.

  1. Morphodynamic modeling of a large inside sand bar and its dextral morphology in a convergent estuary: Qiantang Estuary, China

    NARCIS (Netherlands)

    Xie, Dongfeng; Gao, Shu; Wang, Zhengbing; Pan, Cunhong; Wu, Xiuguang; Wang, Qiushun

    2017-01-01

    We investigate the evolution of a large-scale sand body, a unique type of sandbars in a convergent estuary. Specifically, we analyze and simulate the sand deposition system (defined as an inside bar) in the Qiantang Estuary (QE) in China. The deposit is 130 km long and up to 10 m thick, and is

  2. Phosphorous dynamics in a temperate intertidal estuary

    Science.gov (United States)

    Lillebø, A. I.; Neto, J. M.; Flindt, M. R.; Marques, J. C.; Pardal, M. A.

    2004-09-01

    Conservation and management of aquatic systems require detailed information of the processes that affect their functioning and development. The objectives of the present work were to describe the phosphorus dynamics during a complete tidal cycle and to quantify the relative contribution of the most common estuarine areas (e.g. seagrass beds, salt marshes, mud- and sand-flats without vegetation) to phosphorus net internal loading in a temperate intertidal estuary. Results show that phosphate efflux rates were higher during the first hours of tidal flood, and that phosphate concentrations were lowest at high tide. During tidal ebbing, ephemeral tide pools may cover a considerable percentage of the intertidal area. In these tide pools, water shallowness combined with enhanced temperatures stimulate the occurrence of high phosphate effluxes. The effluxes to the main water body during high tide contributed 57% of dissolved inorganic phosphorus and efflux during low tide contributed 43% to the net internal loading. Calculations of the phosphate net effluxes (kg P) indicate a strong contribution of the bare bottom mud-flats to the whole system internal phosphate loading, especially during the warmer periods. As a consequence of eutrophication, perennial benthic macrophytes are commonly replaced by fast-growing epiphytic macroalgae. Calculations showed that for a hypothetical intertidal estuary in a temperate region, management programs considering an eventual re-colonization of mud-flats by seagrasses or salt marsh plants may reduce the P-efflux by 13-16 kg ha -1. For example, in the small Mondego estuary, eutrophication has contributed to a reduction of the Zostera noltii meadows, leading to an increase in 190 kg of phosphorus net internal loading.

  3. Reproductive and biochemical biomarkers in largemouth bass sampled downstream of a pulp and paper mill in Florida

    Science.gov (United States)

    Sepulveda, M.S.; Gallagher, E.P.; Wieser, C.M.; Gross, T.S.

    2004-01-01

    The objective of this study was to evaluate the effects of bleached/unbleached kraft mill effluents (B/UKME) on the reproductive parameters of free-ranging Florida largemouth bass (Micropterus salmoides floridanus). The reproductive parameters measured included gonadosomatic index (GSI), histological evaluation of gonads, and plasma concentrations of vitellogenin (VTG), 17??-estradiol, and 11-ketotestosterone (11-KT). Hepatic ethoxyresorufin-O-deethylase (EROD) activity was measured as a marker of exposure to cytochrome P450-inducing agents in these effluents. Endpoints were compared among adult bass sampled from tributary and mainstream effluent-contaminated and reference sites. Females sampled from the site closest to the mill outfall had a significant five-fold increase in EROD activity compared to bass sampled from reference streams. Although sex hormones were significantly reduced in bass from exposed sites, there were no differences in VTG and GSI across sites. The absence of organism-level responses was probably not related to a lack of sensitivity, as previous studies in our laboratory have shown that bass exposed to these effluents exhibit changes in GSI and in other measures associated with reproductive success. In females, inverse relationships were observed between VTG and GSI and EROD activity. These relationship, however, were not consistent within all of the sites studied. Collectively, our findings indicate that hepatic EROD induction is an effective marker of B/UKME exposure in largemouth bass and that it might be associated with antiestrogenic effects in this species. ?? 2003 Elsevier Inc. All rights reserved.

  4. Diet overlap and predation between largemouth bass and walleye in Wisconsin lakes using DNA barcoding to improve taxonomic resolution

    Science.gov (United States)

    Kelling, Craig J.; Isermann, Daniel A.; Sloss, Brian L.; Turnquist, Keith N.

    2016-01-01

    Over the last decade, the abundance of Largemouth Bass Micropterus salmoides has increased in many northern Wisconsin lakes, causing concern among anglers and biologists regarding the potential for Largemouth Bass to negatively affect populations of Walleye Sander vitreus through predation or competition for prey. Our objectives were to determine whether (1) diet overlap and predation occurred between adult Walleyes and Largemouth Bass in four northern Wisconsin lakes and (2) the use of DNA barcoding to reduce unidentifiable fish in diet samples affected conclusions regarding diet overlap. A single occurrence of Walleye predation was observed in the diets of 945 Largemouth Bass. Moderate to high diet overlap was observed between Largemouth Bass and Walleyes throughout much of the study period. The use of DNA barcoding reduced the amount of unidentified fish in diets to <1% and showed that failure to identify fish or fish parts can affect conclusions regarding diet overlap. Largemouth Bass predation is probably not a primary factor affecting Walleye abundance in the lakes we selected, but observed diet overlap suggests the potential for competition between the two species.

  5. An edge sensitive 3D measurement using two directional laser stripes scanning with a laser projector

    Science.gov (United States)

    Li, Dong; Zhou, Xiang; Xu, Changda; Wang, Chao; Guo, Jiayu

    2017-09-01

    Laser scanning is widely used in on-line industrial 3D inspection, cultural heritage conservation and reverse engineering. However, in the traditional laser scanning, the most widely-used approach is based on the projection of a single directional laser stripe over an object. Because the width of the laser stripe is physically difficult to compress enough to be fine at the edge of the object, the traditional measurement method is not accurate for edge measurements. This paper proposes an edge sensitive 3D measurement system which is fast and accurate, using two directional laser stripes scanning with a laser projector. Scanning metal edge steps and complex surface edge with this system only require a single scanning to perform 3D reconstruction. So this scanning method has the advantages of high efficiency, high speed and edges with high precision.

  6. Striped states in a many-body system of tilted dipoles

    Science.gov (United States)

    Wenzel, Matthias; Böttcher, Fabian; Langen, Tim; Ferrier-Barbut, Igor; Pfau, Tilman

    2017-11-01

    We study theoretically and experimentally the behavior of a strongly confined dipolar Bose-Einstein condensate in the regime of quantum-mechanical stabilization by beyond-mean-field effects. Theoretically, we demonstrate that self-organized "striped" ground states are predicted in the framework of the extended Gross-Pitaevskii theory. Experimentally, by tilting the magnetic dipoles we show that self-organized striped states can be generated, likely in their metastable state. Matter-wave interference experiments with multiple stripes show that there is no long-range off-diagonal order (global phase coherence). We outline a parameter range where global phase coherence could be established, thus paving the way towards the observation of supersolid states in this system.

  7. A new species of striped Ichthyophis Fitzinger, 1826 (Amphibia: Gymnophiona: Ichthyophiidae) from Myanmar.

    Science.gov (United States)

    Wilkinson, Mark; Presswell, Bronwen; Sherratt, Emma; Papadopoulou, Anna; Gower, David J

    2014-04-02

    A new species of striped ichthyophiid caecilian, Ichthyophis multicolor sp. nov., is described on the basis of morphological and molecular data from a sample of 14 specimens from Ayeyarwady Region, Myanmar. The new species resembles superficially the Indian I. tricolor Annandale, 1909 in having both a pale lateral stripe and an adjacent dark ventrolateral stripe contrasting with a paler venter. It differs from I. tricolor in having many more annuli, and in many details of cranial osteology, and molecular data indicate that it is more closely related to other Southeast Asian Ichthyophis than to those of South Asia. The caecilian fauna of Myanmar is exceptionally poorly known but is likely to include chikilids as well as multiple species of Ichthyophis.

  8. Determination of the quality of stripe-marked and cracked eggs during storage

    Directory of Open Access Journals (Sweden)

    Yu Chi Liu

    2017-07-01

    Full Text Available Objective Stripe marks, which occasionally occur on the shell, do not cause breakage to the shell and shell membranes of eggs. This study investigated the quality of intact eggs (IEs, minor stripe-marked eggs (MEs, severe stripe-marked eggs (SEs, and cracked eggs (CEs during 3-week storage at 25°C. Methods Shell eggs were collected the day after being laid and were washed. Among them, eggs without any visual cracks or stripe marks on the shells were evaluated as IEs by the plant employees using candling in a darkened egg storage room; the remaining eggs exhibited some eggshell defects. At day 3, the eggs were further categorized into IEs, MEs, SEs, CEs, and broken eggs (BEs on the basis of the description given. Except BEs, which were discarded, the remaining eggs were stored at 25°C (approximate relative humidity 50% and then analyzed. Results Stripe marks were observed primarily within the first 3 days after washing. At day 3, CEs had significantly (p<0.05 lower Haugh unit values, but all eggs had grades AA or A, according to the United States Department of Agriculture standard. As storage time increased, differences in egg quality between groups were more obvious. IEs had the highest eggshell breaking strength. During storage, the total plate counts and pathogens, namely Escherichia coli, Campylobacter spp., Staphylococcus aureus, and Salmonella spp., were not detectable in the internal content of IEs and SEs. Conclusion In conclusion, cracks degraded egg quality severely and minor stripe marks only slightly influenced the egg quality.

  9. Effect of white striping on chemical composition and nutritional value of chicken breast meat

    Directory of Open Access Journals (Sweden)

    Massimiliano Petracci

    2014-03-01

    Full Text Available White striping defect (appearance of white striations parallel to muscle fiber on surface of breast is considered an emerging issue in chicken breast meat which is related to increasing growth rate of modern hybrid birds. This study was aimed at evaluating the effect of white striping on chemical composition and nutritional value of chicken breast meat. During three replications, a total of 108 Pectoralis major muscles representing three degrees of white striping (absence=normal; presence classified in 2 levels as moderate or severe were selected to determine proximate composition (moisture, protein, lipid and collagen as well as sarcoplasmic and myofibrillar protein profile by sodium dodecyl sulphatepolyacrylamide gel electrophoresis analysis. The results showed that both severe and moderate white-striped fillets had higher fat content (2.53 vs 1.46 vs 0.78%; P<0.001, lower protein level (20.9 vs 22.2 vs 22.9%; P<0.001, decreased quality of protein as proven by higher collagen content (1.30 vs 1.37 vs 1.43%; P<0.001, and different pattern on myofibrillar and sarcoplasmic fractions when compared to normal fillets. Moreover, severe white-striped fillets exhibited higher energy content (450.7 vs 421.1 kJ/100g; P<0.01 with respect to normal meat. In conclusion, there was a large worsening of nutritional value of chicken breast meat following occurrence of white striping and this might impair consumer attitude towards poultry meat.

  10. Quantity and functionality of protein fractions in chicken breast fillets affected by white striping.

    Science.gov (United States)

    Mudalal, S; Babini, E; Cavani, C; Petracci, M

    2014-08-01

    Recently, white striations parallel to muscle fibers direction have been observed on the surface of chicken breast, which could be ascribed to intensive growth selection. The aim of this study was to evaluate the effect of white striping on chemical composition with special emphasis on myofibrillar and sarcoplasmic protein fractions that are relevant to the processing features of chicken breast meat. During this study, a total of 12 pectoralis major muscles from both normal and white striped fillets were used to evaluate chemical composition, protein solubility (sarcoplasmic, myofibrillar, and total protein solubility), protein quantity (sarcoplasmic, myofibrillar, and stromal proteins), water holding capacity, and protein profile by SDS-PAGE analysis. White-striped fillets exhibited a higher percentage of moisture (75.4 vs. 73.8%; P content of protein (18.7 vs. 22.8%; P content and solubility as well as an increase in cooking loss (33.7 vs. 27.4%; P proteins corresponding to actin (42 kDa); LC1, slow-twitch light chain myosin (27.5 kDa); and LC3, fast-twitch light chain myosin (16 kDa), and almost all sarcoplasmic proteins were lower than normal. In conclusion, the findings of this study revealed that chicken breast meat with white striping defect had different chemical composition (more fat and less protein) and protein quality and quantity (low content of myofibrillar proteins and high content of stromal proteins) with respect to normal meat. Furthermore, white striped fillets had lower protein functionality (higher cooking loss). All the former changes indicate that white striping has great impact on quality characteristics of chicken breast meat. © Poultry Science Association Inc.

  11. Embryonic developmental process governing the conspicuousness of body stripes and blue tail coloration in the lizard Plestiodon latiscutatus.

    Science.gov (United States)

    Kuriyama, Takeo; Hasegawa, Masami

    2017-01-01

    The combination of body stripes and vivid blue tail color has independently evolved in different lizard families. To understand how and when lizards developed this coloration, we microscopically compared the embryonic development of pigment cells in two island populations of Plestiodon latiscutatus that exhibit either striped and blue tailed or inconspicuously striped and blue tailed juveniles, based on the newly determined 12 normal developmental stages of embryos from shortly after egg laying to just before hatching. We focus on the role of the melanophores in the body stripe and the role of iridophore morphotypes in the extent of blue tail coloration. The melanophore density in the black background region was higher in lizards with vivid stripes than in lizards with drab stripes. Iridophores started to fill the dermal space that was not yet occupied by melanophores, which resulted in a higher iridophore density in stripes than in the inter-stripe regions. We also discovered that iridophores with thin platelets reflecting blue structural coloration appeared at a specific region in the tail at stage 11. The position of the tail where iridophores emerged coincided with the boundary area separating anterior brown and green colored tail from posterior blue colored tail after hatching. © 2016 Wiley Periodicals, Inc.

  12. Histology and Ultrastructure of Transitional Changes in Skin Morphology in the Juvenile and Adult Four-Striped Mouse (Rhabdomys pumilio)

    Science.gov (United States)

    Stewart, Eranée; Ajao, Moyosore Salihu

    2013-01-01

    The four-striped mouse has a grey to brown coloured coat with four characteristic dark stripes interspersed with three lighter stripes running along its back. The histological differences in the skin of the juvenile and adult mouse were investigated by Haematoxylin and Eosin and Masson Trichrome staining, while melanocytes in the skin were studied through melanin-specific Ferro-ferricyanide staining. The ultrastructure of the juvenile skin, hair follicles, and melanocytes was also explored. In both the juvenile and adult four-striped mouse, pigment-containing cells were observed in the dermis and were homogeneously dispersed throughout this layer. Apart from these cells, the histology of the skin of the adult four-striped mouse was similar to normal mammalian skin. In the juvenile four-striped mouse, abundant hair follicles of varying sizes were observed in the dermis and hypodermis, while hair follicles of similar size were only present in the dermis of adult four-striped mouse. Ultrastructural analysis of juvenile hair follicles revealed that the arrangement and differentiation of cellular layers were typical of a mammal. This study therefore provides unique transition pattern in the four-striped mouse skin morphology different from the textbook description of the normal mammalian skin. PMID:24288469

  13. Feshbach shape resonance for high Tc pairing in superlattices of quantum stripes and quantum wells

    Directory of Open Access Journals (Sweden)

    A Bianconi

    2006-09-01

    Full Text Available   The Feshbach shape resonances in the interband pairing in superconducting superlattices of quantum wells or quantum stripes is shown to provide the mechanism for high Tc superconductivity. This mechanism provides the Tc amplification driven by the architecture of material: superlattices of quantum wells (intercalated graphite or diborides and superlattices of quantum stripes (doped high Tc cuprate perovskites where the chemical potential is tuned to a Van Hove-Lifshitz singularity (vHs in the electronic energy spectrum of the superlattice associated with the change of the Fermi surface dimensionality in one of the subbands.

  14. Accurate Estimation of Target amounts Using Expanded BASS Model for Demand-Side Management

    Science.gov (United States)

    Kim, Hyun-Woong; Park, Jong-Jin; Kim, Jin-O.

    2008-10-01

    The electricity demand in Korea has rapidly increased along with a steady economic growth since 1970s. Therefore Korea has positively propelled not only SSM (Supply-Side Management) but also DSM (Demand-Side Management) activities to reduce investment cost of generating units and to save supply costs of electricity through the enhancement of whole national energy utilization efficiency. However study for rebate, which have influence on success or failure on DSM program, is not sufficient. This paper executed to modeling mathematically expanded Bass model considering rebates, which have influence on penetration amounts for DSM program. To reflect rebate effect more preciously, the pricing function using in expanded Bass model directly reflects response of potential participants for rebate level.

  15. A sigmoid model to predict gastric evacuation rates of smallmouth bass Micropterus dolomieui fed juvenile salmon

    Science.gov (United States)

    Rogers, Jean Beyer; Burley , Craig C.

    1991-01-01

    Laboratory experiments were conducted to examine the effects of water temperature, predator size, prey size, and prey number on gastric evacuation of smallmouth bass (Micropterus dolomieui) fed juvenile salmon. The smallmouth bass were allowed to feed voluntarily after 24–48 h of starvation and stomachs were pumped at intervals of 1–4 h until 90% of the stomach contents were evacuated (E90). Evacuation approximated an S-shaped curve over time, and a sigmoid model was developed to predict evacuation at varying water temperatures, total meal weights, predator sizes, and prey number. The rate of evacuation increased with increasing water temperature, meal weight, or predator size. The E90 increased with larger meal weights but decreased with increasing temperature or predator size. E90 ranged between 4 and 95 h, depending upon conditions. E90 was slower than those estimated previously for another predator of salmon, the stomachless northern squawfish (Ptychocheilus oregonensis).

  16. Largemouth bass (Micropterus salmoides Lacépède: results of farming trials

    Directory of Open Access Journals (Sweden)

    R. Vicenzi

    2010-01-01

    Full Text Available In the last years in the United States, the demand of largemouth bass (Micropterus salmoides larger than the size usually produced for sport fishing purposes has increased. The growth phase is carried on in ponds, after having evaluated different strains (Williamson and Carmichael, 1990 using feeds for salmonids (Tidwell et al., 1996 supplemented with amino acids (Coyle et al., 2000. Also in Italy, the market currently requires largemouth bass of 300-500 g. This situation has induced one farmer to cooperate with our research centre and carried out trials to verify the possibility of rearing this fish, from the fingerling stage up to the size suitable for food, using the same farming techniques as those currently being applied in the United States (Davis and Lock, 1997.

  17. Physicochemical and biological cycles in a tide dominated, nitrogen-polluted temperate estuary

    OpenAIRE

    Wafar, M.V.M.; Le Corre, P.; Birrien, J L

    1988-01-01

    Spatio-temporal variations in the physicochemical and biological parameters in the Morlaix estuary on the Brittany coast of France were studied. Hydrographically, the estuary can be classified into 3 segments: the upper estuary where stratification always persists, the lower estuary where vertical homogeneity is permanent, and a middle estuary where there is a regular oscillation of stratification and homogeneity during every tidal cycle, stratification being associated with slack waters and ...

  18. Application of a bioenergetics model for hatchery production: Largemouth bass fed commercial diets

    Science.gov (United States)

    Csargo, Isak J.; Michael L. Brown,; Chipps, Steven R.

    2012-01-01

    Fish bioenergetics models based on natural prey items have been widely used to address research and management questions. However, few attempts have been made to evaluate and apply bioenergetics models to hatchery-reared fish receiving commercial feeds that contain substantially higher energy densities than natural prey. In this study, we evaluated a bioenergetics model for age-0 largemouth bass Micropterus salmoidesreared on four commercial feeds. Largemouth bass (n ≈ 3,504) were reared for 70 d at 25°C in sixteen 833-L circular tanks connected in parallel to a recirculation system. Model performance was evaluated using error components (mean, slope, and random) derived from decomposition of the mean square error obtained from regression of observed on predicted values. Mean predicted consumption was only 8.9% lower than mean observed consumption and was similar to error rates observed for largemouth bass consuming natural prey. Model evaluation showed that the 97.5% joint confidence region included the intercept of 0 (−0.43 ± 3.65) and slope of 1 (1.08 ± 0.20), which indicates the model accurately predicted consumption. Moreover model error was similar among feeds (P = 0.98), and most error was probably attributable to sampling error (unconsumed feed), underestimated predator energy densities, or consumption-dependent error, which is common in bioenergetics models. This bioenergetics model could provide a valuable tool in hatchery production of largemouth bass. Furthermore, we believe that bioenergetics modeling could be useful in aquaculture production, particularly for species lacking historical hatchery constants or conventional growth models.

  19. Intersex (Testicular Oocytes) in smallmouth bass from the Potomac River and selected nearby drainages

    Science.gov (United States)

    Blazer, V.S.; Iwanowicz, L.R.; Iwanowicz, D.D.; Smith, D.R.; Young, J.A.; Hedrick, J.D.; Foster, S.W.; Reeser, S.J.

    2007-01-01

    Intersex, or the presence of characteristics of both sexes, in fishes that are normally gonochoristic has been used as an indicator of exposure to estrogenic compounds. In 2003, during health assessments conducted in response to kills and a high prevalence of skin lesions observed in smallmouth bass Micropterus dolomieu in the South Branch of the Potomac River, the presence of immature oocytes within testes was noted. To evaluate this condition, a severity index (0-4) was developed based on the distribution of oocytes within the testes. Using gonad samples collected from 2003 to 2005, the number of histologic sections needed to accurately detect the condition in mature smallmouth bass was statistically evaluated. The reliability of detection depended on the severity index and the number of sections examined. Examining five transverse sections taken along the length of the gonad resulted in a greater than 90% probability of detecting testicular oocytes when the severity index exceeded 0.5. Using the severity index we compared smallmouth bass collected at selected sites within the South Branch during three seasons in 2004. Seasonal differences in severity and prevalence were observed. The highest prevalence and severity were consistently noted during the prespawn-spawning season, when compared with the postspawn season. In 2005, smallmouth bass were collected at selected out-of-basin sites in West Virginia where fish kills and external skin lesions have not been reported, as well as at sites in the Shenandoah River, Virginia (part of the Potomac drainage), where kills and lesions occurred in 2004-2005. The prevalence of testicular oocytes is discussed in terms of human population and agricultural intensity. ?? Copyright by the American Fisheries Society 2007.

  20. Dissolved oxygen regimen (PO2 may affect osmorespiratory compromise in European sea bass (Dicentrarchus labrax, L.

    Directory of Open Access Journals (Sweden)

    Genciana Terova

    2010-02-01

    Full Text Available Fundamentally, in land based mediterranean aquaculture, two techniques are applied to supply water with oxygen: paddling water aeration and application of pure oxygen. The two oxygenation techniques result in quite different PO2 regimens and, consequently, different fish growth performance and gill morphology. Data exist showing a reduction in total respiratory surface (RSA and increasing gas diffusion distance (GDD in gills of sea bass (Dicentrarchus labrax, L. farmed under elevated PO2 regimens. That such a modification might have an effect on the ion regulation has been defined elsewhere as osmorespiratory compromise. In this study, European sea bass previously acclimatized to two PO2 regimens, mild hypoxia and mild hyperoxia (70-80% and 130-140% of the saturation value, respectively, were challenged for 1 hour with hypo-osmotic plus manipulation stress in two separate trials. During the first trial, when only Na+ loss was determined, the ion efflux during the first 5 min resulted in a rate of 163.72±31 and 112.23±87 nmol g-1min-1 from hypoxia and hyperoxia sea bass groups, respectively, and, if sustained, would approach 15.3 and 11.2% per hour of the total body Na+, respectively. During the second trial, in which both Na+ and Cl- loss were determined, after 60 min the Na+ loss was shown to be 76.86±12 and 179.28±32 nmol g-1 min-1 for the fish previously acclimatized to hyperoxia and hypoxia regimens, respectively, whereas for Cl- this loss was 62.02±11 and 157.28±28 nmol g-1min-1, respectively. Our data are compatible with the hypothesis of an osmotic advantage of sea bass exposed to an elevated PO2 regimen, achievable with application of pure oxygen, instead of simple water aeration.

  1. Evaluation of genetic population structure of smallmouth bass in the Susquehanna River basin, Pennsylvania

    Science.gov (United States)

    Schall, Megan K.; Bartron, Meredith L.; Wertz, Timothy; Niles, Jonathan M.; Shaw, Cassidy H.; Wagner, Tyler

    2017-01-01

    The Smallmouth Bass Micropterus dolomieu was introduced into the Susquehanna River basin, Pennsylvania, nearly 150 years ago. Since introduction, it has become an economically and ecologically important species that supports popular recreational fisheries. It is also one of the most abundant top predators in the system. Currently, there is no information on the level of genetic diversity or genetic structuring that may have occurred since introduction. An understanding of genetic diversity is important for the delineation of management units and investigation of gene flow at various management scales. The goals of this research were to investigate population genetic structure of Smallmouth Bass at sites within the Susquehanna River basin and to assess genetic differentiation relative to Smallmouth Bass at an out-of-basin site (Allegheny River, Pennsylvania) located within the species’ native range. During spring 2015, fin clips (n = 1,034) were collected from adults at 11 river sites and 13 tributary sites in the Susquehanna River basin and at one site on the Allegheny River. Fin clips were genotyped at 12 polymorphic microsatellite loci. Based on our results, adults sampled throughout the Susquehanna River basin did not represent separate genetic populations. There were only subtle differences in genetic diversity among sites (mean pairwise genetic differentiation index FST = 0.012), and there was an overall lack of population differentiation (K = 3 admixed populations). The greatest genetic differentiation was observed between fish collected from the out-of-basin site and those from the Susquehanna River basin sites. Knowledge that separate genetic populations of Smallmouth Bass do not exist in the Susquehanna River basin is valuable information for fisheries management in addition to providing baseline genetic data on an introduced sport fish population.

  2. Geographic signatures of North American West Coast estuaries

    Science.gov (United States)

    Emmett, Robert; Llansó, Roberto; Newton, Jan; Thom, Ron; Hornberger, Michelle; Morgan, Cheryl; Levings, Colin; Copping, Andrea; Fishman, Paul

    2000-01-01

    West Coast estuaries are geologically young and composed of a variety of geomorphological types. These estuaries range from large fjords to shallow lagoons; from large to low freshwater flows. Natural hazards include E1 Niños, strong Pacific storms, and active tectonic activity. West Coast estuaries support a wide range of living resources: five salmon species, harvestable shellfish, waterfowl and marine birds, marine mammals, and a variety of algae and plants. Although populations of many of these living resources have declined (salmonids), others have increased (marine mammals). West Coast estuaries are also centers of commerce and increasingly large shipping traffic. The West Coast human population is rising faster than most other areas of the U.S. and Canada, and is distributed heavily in southern California, the San Francisco Bay area, around Puget Sound, and the Fraser River estuary. While water pollution is a problem in many of the urbanized estuaries, most estuaries do not suffer from poor water quality. Primary estuarine problems include habitat alterations, degradation, and loss; diverted freshwater flows; marine sediment contamination; and exotic species introductions. The growing West Coast economy and population are in part related to the quality of life, which is dependent on the use and enjoyment of abundant coastal natural resources.

  3. Improving aeration for efficient oxygenation in sea bass sea cages. Blood, brain and gill histology

    Directory of Open Access Journals (Sweden)

    Berillis Panagiotis

    2016-01-01

    Full Text Available An air diffusion based system (Airx was developed to control the dissolved oxygen levels in aquaculture sea cages. The system was introduced and then tested for 37 days in a sea bass sea cage (aerated cage. A second sea bass sea cage, without the AirX, was used as a control. Oxygen levels were measured in both cages at the start of the trial, before the AirX system was introduced, and during the working period of the AirX system. Fish samples were collected 15 days after the AirX system was introduced and at the end of the experiment. Blood smears were prepared and examined microscopically. Erythrocyte major axis, minor axis and area of fish erythrocytes were measured. Leucocyte differentiation was also examined. In the control cage, the fish had significantly larger red blood cells when compared with the red blood cells of the fish in the aerated cage. Histological examination of the gills and brain revealed no morphological differences or alterations between the two groups of fish. This study demonstrated that an air diffuser system could improve the water quality of fish farmed in sea cages and enhance sea bass physiological performance, especially if DO levels fall below 60% oxygen saturation.

  4. Nonlethal laparoscopic detection of intersex (testicular oocytes) in largemouthbass (Micropterus salmoides) and smallmouth bass (Micropterus dolomieu)

    Science.gov (United States)

    Blazer, Vicki; Macleod, Alexander H; Matsche, Mark A; Yonkos, Lance T

    2017-01-01

    Intersex in wild fish populations has received considerable attention in the scientific literature and public media. Conventional detection of testicular oocytes (TO), the presence of immature oocytes within testis of male fish, employs transverse sectioning of excised testis and is lethal. This present study used a non-lethal laparoscopic technique to collect biopsies of testis from black bass, entering the body cavity via the genital pore. Detection of TO was compared between biopsy and conventional methods using 79 smallmouth bass (SMB) Micropterus dolomieu from 8 sites and 68 largemouth bass (LMB) M. salmoides from 4 sites. Both methods performed similarly at sites where TO severity was moderate or high (6 of 8 SMB sites) while transverse sectioning resulted in superior TO detection at sites where severity was low (2 of 8 SMB sites and all 4 LMB sites). In SMB, TO prevalence by transverse and biopsy methods was strongly correlated across sites (r2 = 0.81) and severity reported by enumeration of TO was moderately correlated across sites (r2 = 0.59). Survival of a subset of LMB (n = 20) to 28-d after laparoscopic surgery was 90%. This research indicates that laparoscopy may be useful for monitoring the prevalence and severity of TO in Micropterus species, particularly when lethal sampling is precluded.

  5. Controls on suspended aggregate size in partially mixed estuaries

    Science.gov (United States)

    Fugate, David C.; Friedrichs, Carl T.

    2003-10-01

    Knowledge of aggregate size in estuaries is important to determining the fate and transport of suspended sediment and particle adherent contaminants. We have used a suite of in situ instruments to determine the controls of aggregate size distributions in three muddy, partially mixed estuaries in the mid-Atlantic USA. A novel method is presented to estimate turbulent kinetic energy (TKE) production and the resulting Kolmogorov microscale ( λK) using a profiling acoustic Doppler velocimeter that has been contaminated by boat motion. The physical processes that control particle size distribution differ in the three estuaries due to the different hydrodynamics and benthic characteristics. Controls within each estuary also vary with different depth regimes. Surface particle size dynamics in all the studied estuaries are affected by irregular advection events. In the hydrodynamically energetic York River, mid-depth regions are controlled tidally by the combined processes of small λK decreasing particle size at high TKE and differential settling increasing particle size during lower TKE, more stratified conditions. Mid-depth regions in the lower energy Elizabeth River are controlled by irregular resuspension and trapping at the pycnocline of large low density particles. Bottom regions in all estuaries are most strongly influenced by resuspension, tidally in the energetic estuaries and irregularly in the low energy estuary. Near-bed particle size distributions are controlled by both λK and the distribution of particles in the bed in the higher energy estuaries. Just above the bed, large porous particles survive resuspension in the lower energy Elizabeth River, particles become smaller with decreased λK in the more energetic York River, and biological aggregation causes large dense particles to resist turbulent breakup in the Chesapeake Bay, which has a more active benthic community. The net result just above the bed is that particle size and settling velocity are

  6. CO2 supersaturation and net heterotrophy in a tropical estuary (Cochin, India): Influence of anthropogenic effect - Carbon dynamics in tropical estuary

    Digital Repository Service at National Institute of Oceanography (India)

    Gupta, G.V.M.; Thottathil, S.D.; Balachandran, K.K.; Madhu, N.V.; Madeswaran, P.; Nair, S.

    Carbon biogeochemistry of a tropical ecosystem (The Cochin Estuary, India) undergoing increased human intervention was studied during February (premonsoon), April (early monsoon) and September (monsoon) 2005. The Cochin estuary sustains high levels...

  7. The European sea bass Dicentrarchus labrax genome puzzle: comparative BAC-mapping and low coverage shotgun sequencing

    Directory of Open Access Journals (Sweden)

    Volckaert Filip AM

    2010-01-01

    Full Text Available Abstract Background Food supply from the ocean is constrained by the shortage of domesticated and selected fish. Development of genomic models of economically important fishes should assist with the removal of this bottleneck. European sea bass Dicentrarchus labrax L. (Moronidae, Perciformes, Teleostei is one of the most important fishes in European marine aquaculture; growing genomic resources put it on its way to serve as an economic model. Results End sequencing of a sea bass genomic BAC-library enabled the comparative mapping of the sea bass genome using the three-spined stickleback Gasterosteus aculeatus genome as a reference. BAC-end sequences (102,690 were aligned to the stickleback genome. The number of mappable BACs was improved using a two-fold coverage WGS dataset of sea bass resulting in a comparative BAC-map covering 87% of stickleback chromosomes with 588 BAC-contigs. The minimum size of 83 contigs covering 50% of the reference was 1.2 Mbp; the largest BAC-contig comprised 8.86 Mbp. More than 22,000 BAC-clones aligned with both ends to the reference genome. Intra-chromosomal rearrangements between sea bass and stickleback were identified. Size distributions of mapped BACs were used to calculate that the genome of sea bass may be only 1.3 fold larger than the 460 Mbp stickleback genome. Conclusions The BAC map is used for sequencing single BACs or BAC-pools covering defined genomic entities by second generation sequencing technologies. Together with the WGS dataset it initiates a sea bass genome sequencing project. This will allow the quantification of polymorphisms through resequencing, which is important for selecting highly performing domesticated fish.

  8. Die faktorstruktuur van Bass se veelfaktor- leierskapsvraelys in die Suid-Afrikaanse konteks

    Directory of Open Access Journals (Sweden)

    C .P. Ackermann

    2000-06-01

    Full Text Available The factor structure of Bass's Multifactor Leadership Questionnaire in the South African context. The aim of the study was to determine whether the factor structure of Bass's Multifactor Leadership Questionnaire (MLQ, as a measure of transformational leadership, could be replicated within the South African context. The MLQ was chosen not only because it promised to be a valid and reliable measuring instrument of the construct in question, but also due to the fact that there was an urgent need for such an instrument in the management of human resources within organisations undergoing transformation. The MLQ was administered to 406 subjects within the military context and was subjected to factor analysis and item analysis. The factor analysis yielded three factors, namely transformational leadership, transactional leadership and avoidance of leadership ("laissez faire" leadership. The reliabilities of the scales were determined by means of Cronbach's coefficient alpha, and yielded coefficients of 0,944, 0,736 and 0,803 respectively. The factor structure as conceptualised by Bass (1985 was largely confirmed in the present study. Opsomming Die doel van die studie was om vas te stel of die faktorstruktuur van die Veelfaktorleierskapsvraelys (MLQ van Bass, as maatstafvan transformasionele leierskap, in die Suid-Afrikaanse konteks gerepliseer kon word. Die MLQ is gekies omdat dit belofte inhou as n geldige en betroubare meetinstrument van die onderhawige konstruk, en ook weens die feit dat daar 'n dringende behoefte bestaan aan so n instrument vir gebruik in die bestuur van menslike hulpbronne in organisasies tydens verandering. Die MLQ is op 406 proefpersone binne militêre konteks toegepas, en aan n faktorontleding en n itemontleding onderwerp. Die faktorontleding het drie faktore opgelewer, te wete transformasionele leierskap, transaksionele leierskap en vermyding van leierskap ("laissez faire"-leierskap. Die betroubaarheid van die skale is bepaal

  9. Genetics of adult plant stripe rust resistance in CSP44, a selection ...

    Indian Academy of Sciences (India)

    Unknown

    areas of temperate zones (Johnson 1988). Yield losses can be considerable, ranging from about 40 per cent to com- plete destruction of the crop depending upon the growth stage at which the disease attacks. Using diverse genes for resistance against stripe rust disease is the most eco- nomical and environmentally safe ...

  10. Genetics of leaf and stripe rust resistance in a bread wheat cultivar ...

    Indian Academy of Sciences (India)

    Home; Journals; Journal of Genetics; Volume 87; Issue 2. Genetics of leaf and stripe rust resistance in a bread wheat cultivar Tonichi. Satinder Kaur U. K. Bansal Renu Khanna R. G. Saini. Research Note Volume 87 Issue 2 August 2008 pp 191-194 ...

  11. Spin-stripe phase in a frustrated zigzag spin-1/2 chain

    Science.gov (United States)

    Pregelj, M.; Zorko, A.; Zaharko, O.; Nojiri, H.; Berger, H.; Chapon, L. C.; Arčon, D.

    2015-06-01

    Motifs of periodic modulations are encountered in a variety of natural systems, where at least two rival states are present. In strongly correlated electron systems, such behaviour has typically been associated with competition between short- and long-range interactions, for example, between exchange and dipole-dipole interactions in the case of ferromagnetic thin films. Here we show that spin-stripe textures may develop also in antiferromagnets, where long-range dipole-dipole magnetic interactions are absent. A comprehensive analysis of magnetic susceptibility, high-field magnetization, specific heat and neutron diffraction measurements unveils β-TeVO4 as a nearly perfect realization of a frustrated (zigzag) ferromagnetic spin-1/2 chain. Notably, a narrow spin-stripe phase develops at elevated magnetic fields due to weak frustrated short-range interchain exchange interactions, possibly assisted by the symmetry-allowed electric polarization. This concept provides an alternative route for the stripe formation in strongly correlated electron systems and may help understanding of other widespread, yet still elusive, stripe-related phenomena.

  12. Post-epizootic chronic dolphin morbillivirus infection in Mediterranean striped dolphins Stenella coeruleoalba.

    Science.gov (United States)

    Soto, Sara; Alba, Ana; Ganges, Llilianne; Vidal, Enric; Raga, Juan Antonio; Alegre, Ferrán; González, Beatriz; Medina, Pascual; Zorrilla, Irene; Martínez, Jorge; Marco, Alberto; Pérez, Mónica; Pérez, Blanca; Pérez de Vargas Mesas, Ana; Martínez Valverde, Rosa; Domingo, Mariano

    2011-10-06

    Dolphin morbillivirus (DMV) has caused 2 epizootics with high mortality rates on the Spanish Mediterranean coast, in 1990 and 2006-07, mainly affecting striped dolphins Stenella coeruleoalba. Following the first epizootic unusual DMV infections affecting only the central nervous system of striped dolphins were found, with histological features similar to subacute sclerosing panencephalitis and old dog encephalitis, the chronic latent localised infections caused by defective forms of measles virus and canine distemper virus, respectively. Between 2008 and 2010, monitoring by microscopic and immunohistochemical (IHC) studies of 118 striped dolphins stranded along Catalonia, the Valencia Region and Andalusia showed similar localised DMV nervous system infections in 25.0, 28.6 and 27.4% of cases, respectively, with no significant differences among regions or sex. The body length of DMV-infected dolphins was statistically greater than that of non-infected dolphins (196.5 vs. 160.5 cm; p dolphins with positive IHC-DMV had positive PCR results. All 6 cases were positive with the 78 bp RT-PCR. These findings contraindicate the use of the 429 bp RT-PCR protocol based on the P gene to detect this specific form of DMV. DMV localised nervous infection constitutes the most relevant single cause of stranding and death in Mediterranean striped dolphins in the years following a DMV epizootic, and it might even overwhelm the effects of the epizootic itself, at least in 2007.

  13. Aerial Ultrasonic Source Using Stripe-Mode Transverse Vibrating Plate with Jutting Driving Point

    Science.gov (United States)

    Miura, Hikaru; Ishikawa, Hitoshi

    2009-07-01

    Ultrasonic sources using a stripe-mode rectangular transverse vibrating plate have been used as acoustic sources emitting intense acoustic waves in air. Because these sources are based on the resonance of transverse vibration, their electric-acoustic conversion rate is as high as 90%, which is a merit. In this study, a vibrating plate with a unique shape was developed to enhance the effectiveness of acoustic sources. It is called a stripe-mode transverse vibrating plate with a jutting driving point. The advantage of this plate shape is that the acoustic source does not interfere with the emission of acoustic waves since the driving point is outside the plate, and there is no need to distinguish between the front and back sides of the vibrating plate. The conditions effective for driving the stripe-mode transverse vibrating plate were clarified. That is, the length of the side parallel to the node lines of the plate is an odd number times the length between the nodes in the stripe mode, and the length of the side perpendicular is at least 6 times but not a multiple of 3 greater than or equal to 15 times, subtracted by 0.5 times, the length between the nodes. Moreover, the length between the driving point and the edge of the plate is a positive integer with a noninteger value of 0.9.

  14. Genetics of leaf and stripe rust resistance in a bread wheat cultivar ...

    Indian Academy of Sciences (India)

    Leaf rust caused by Puccinia triticina (=P. recondita Rober- age ex Desmaz f. sp. tritici Eriks and E. Henn.) and stripe rust caused by P. striiformis Westend f. sp. tritici are the major foliar diseases of wheat, resulting in yield loss all over the world (Eversmeyer and Browder 1974; Kolmer 1996). The wheat cultivars become ...

  15. Variation in the timing of reproduction of the four-striped field mouse ...

    African Journals Online (AJOL)

    We used the four-striped field mouse, Rhabdomys pumilio (Sparrmann, 1784), to test the hypothesis that reproduction in a small, short-lived mammal will be opportunistic, characterized by temporal and spatial variation in the timing of events, and only be inhibited under harsh and predictable winter conditions. Field mice ...

  16. Molecular mapping of a stripe rust resistance gene in wheat line C51

    Indian Academy of Sciences (India)

    Stripe rust, a major disease in areas where cool temperatures prevail, can strongly influence grain yield. To control this disease, breeders have incorporated seedling resistance genes from a variety of sources outside the primary wheat gene pool. The wheat line C51, introduced from the International Center for Agricultural ...

  17. VICS82: The VISTA-CFHT Stripe 82 Near-infrared Survey

    Science.gov (United States)

    Geach, J. E.; Lin, Y.-T.; Makler, M.; Kneib, J.-P.; Ross, N. P.; Wang, W.-H.; Hsieh, B.-C.; Leauthaud, A.; Bundy, K.; McCracken, H. J.; Comparat, J.; Caminha, G. B.; Hudelot, P.; Lin, L.; Van Waerbeke, L.; Pereira, M. E. S.; Mast, D.

    2017-07-01

    We present the VISTA-CFHT Stripe 82 (VICS82) survey: a near-infrared (J+K s ) survey covering 150 square degrees of the Sloan Digital Sky Survey (SDSS) equatorial Stripe 82 to an average depth of J = 21.9 AB mag and K s = 21.4 AB mag (80% completeness limits; 5σ point-source depths are approximately 0.5 mag brighter). VICS82 contributes to the growing legacy of multiwavelength data in the Stripe 82 footprint. The addition of near-infrared photometry to the existing SDSS Stripe 82 coadd ugriz photometry reduces the scatter in stellar mass estimates to δ {log}({M}\\star )≈ 0.3 dex for galaxies with {M}\\star > {10}9 {M}⊙ at z≈ 0.5, and offers improvement compared to optical-only estimates out to z≈ 1, with stellar masses constrained within a factor of approximately 2.5. When combined with other multiwavelength imaging of the Stripe, including moderate-to-deep ultraviolet (GALEX), optical and mid-infrared (Spitzer-IRAC) coverage, as well as tens of thousands of spectroscopic redshifts, VICS82 gives access to approximately 0.5 Gpc3 of comoving volume. Some of the main science drivers of VICS82 include (a) measuring the stellar mass function of {L}\\star galaxies out to z˜ 1; (b) detecting intermediate-redshift quasars at 2≲ z≲ 3.5; (c) measuring the stellar mass function and baryon census of clusters of galaxies, and (d) performing cross-correlation experiments of cosmic microwave background lensing in the optical/near-infrared that link stellar mass to large-scale dark matter structure. Here we define and describe the survey, highlight some early science results, and present the first public data release, which includes an SDSS-matched catalog as well as the calibrated pixel data themselves.

  18. Mutual information of local field potentials distinguishes area-V2 stripe compartments

    Directory of Open Access Journals (Sweden)

    Parajuli A

    2014-09-01

    Full Text Available Arun Parajuli, Anastasia Eriksson, Daniel J Felleman Department of Neurobiology and Anatomy, University of Texas Medical School at Houston, Houston, TX, USA Purpose: Determining how information is represented by populations of neurons in different cortical areas is critical to our understanding of the brain mechanisms of visual perception. Recently, information-theoretical approaches have been applied to the analysis of spike trains of multiple neurons. However, other neurophysiological signals, such as local field potentials (LFPs, offer a different source of information worthy of investigating in this way. In this study, we investigate how the modular organization of area V2 of macaque monkeys impacts the information represented in LFPs. Materials and methods: LFPs were recorded from a 32-channel microelectrode array implanted in area V2 of an anesthetized macaque monkey. The electrode positions were recovered in histological tissue stained for cytochrome oxidase (CO to reveal the modular organization of V2. Visual stimuli consisted of a variety of moving gratings that differed in orientation, direction, spatial frequency, and chromatic content. Results: LFPs were separated into different frequency bands for analysis of mutual information as a function of stimulus type and CO-stripe location. High-γ-band LFPs revealed the highest information content across the electrode array. The distributions of total mutual information as well as mutual information due to correlations varied greatly by CO stripe. This analysis indicates that local correlations within each CO stripe generally reduce mutual information, whereas correlations between stripes greatly increase mutual information. Conclusion: The decomposition mutual information based on the power of different frequency bands of LFPs provides new insight into the impact of modular architecture on population coding in area V2. Unlike other cortical areas, such as V1, where mutual information based

  19. Sustained eruptions on Enceladus explained by turbulent dissipation in tiger stripes.

    Science.gov (United States)

    Kite, Edwin S; Rubin, Allan M

    2016-04-12

    Spacecraft observations suggest that the plumes of Saturn's moon Enceladus draw water from a subsurface ocean, but the sustainability of conduits linking ocean and surface is not understood. Observations show eruptions from "tiger stripe" fissures that are sustained (although tidally modulated) throughout each orbit, and since the 2005 discovery of the plumes. Peak plume flux lags peak tidal extension by ∼1 rad, suggestive of resonance. Here, we show that a model of the tiger stripes as tidally flexed slots that puncture the ice shell can simultaneously explain the persistence of the eruptions through the tidal cycle, the phase lag, and the total power output of the tiger stripe terrain, while suggesting that eruptions are maintained over geological timescales. The delay associated with flushing and refilling of O(1)-m-wide slots with ocean water causes erupted flux to lag tidal forcing and helps to buttress slots against closure, while tidally pumped in-slot flow leads to heating and mechanical disruption that staves off slot freezeout. Much narrower and much wider slots cannot be sustained. In the presence of long-lived slots, the 10(6)-y average power output of the tiger stripes is buffered by a feedback between ice melt-back and subsidence to O(10(10)) W, which is similar to observed power output, suggesting long-term stability. Turbulent dissipation makes testable predictions for the final flybys of Enceladus by Cassini Our model shows how open connections to an ocean can be reconciled with, and sustain, long-lived eruptions. Turbulent dissipation in long-lived slots helps maintain the ocean against freezing, maintains access by future Enceladus missions to ocean materials, and is plausibly the major energy source for tiger stripe activity.

  20. How the National Estuary Programs Address Environmental Issues

    Science.gov (United States)

    Estuaries face many challenges including, alteration of natural hydrologic flows, aquatic nuisance species, climate change, declines in fish and wildlife populations, habitat loss and degradation, nutrient loads, pathogens, stormwater and toxics.

  1. Bacterial contamination of mussels at Mahe estuary, Malabar coast

    Digital Repository Service at National Institute of Oceanography (India)

    Gore, P.S.; Raveendran, O.; Iyer, T.S.G.; Varma, P.R.G.; Sankaranarayanan, V.N.

    Mussel samples from the mussel bed and near-by market, beach sand, sediment and water from the Mahe Estuary, Kerala, India were analysed for the bacterial quality. Indicator bacteria such as Escherichia coli and faecal streptococci were isolated...

  2. Solar radiation and its penetration in a tropical estuary

    Digital Repository Service at National Institute of Oceanography (India)

    Qasim, S.Z.; Bhattathiri, P.M.A.; Abidi, S.A.H.

    The Cochin Backwater which is an estuarine area on the west coast of India receives maximum solar radiation from December to March and minimum from June to September. During the monsoon months the estuary becomes highly turbid as a result...

  3. Commercially important penaeid shrimp larvae in the estuaries of Goa

    Digital Repository Service at National Institute of Oceanography (India)

    Achuthankutty, C.T.

    Larval stages of the penaeid shrimps, Metapenaeus dobsoni (Miers), M. affinis (Milne - Edwards) and Penaeus merguiensis De Man were mostly distributed at the lower reaches of Mandovi and Zuari estuaries. While larvae of M. dobsoni and M. affinis...

  4. Estuary 2100 Project, Phase 2: Building Partnerships for Resilient Watersheds

    Science.gov (United States)

    Information about the SFBWQP Estuary 2100 Project, Phase 2: Building Partnerships for Resilient Watersheds, part of an EPA competitive grant program to improve SF Bay water quality focused on restoring impaired waters and enhancing aquat

  5. Short term variations in particulate matter in Mahi river estuary

    Digital Repository Service at National Institute of Oceanography (India)

    Bhosle, N.B.; Rokade, M.A.; Zingde, M.D.

    The particulate matter (PM) collected from Mahi River Estuary was analysed for organic carbon (POC), nitrogen (PON), and chlorophyll a (Chl a). The concentration of PM, POC, PON and Chl a showed short term variations. Average surface concentration...

  6. Adaptations in phytoplankton to changing conditions in tropical estuaries

    Digital Repository Service at National Institute of Oceanography (India)

    Qasim, S.Z.

    Experimental studies on phytoplankton organisms from Cochin backwaters (a tropical estuary) have shown that many algal forms are adapted to changing conditions of salinity, light and nutrients. Photosynthesis in 12 species of algae was found...

  7. NEKTON-HABITAT ASSOCIATIONS IN A PACIFIC NORTHWEST (USA) ESTUARY

    Science.gov (United States)

    Nekton−habitat associations were determined in Yaquina Bay, Oregon, United States, using a stratified-by-habitat, random, estuary-wide sampling design. Three habitats (intertidal eelgrass [Zostera marina], mud shrimp [Upogebia pugettensis], and ghost shrimp [Neotrypaea californie...

  8. Habitat Scale Mapping of Fisheries Ecosystem Service Values in Estuaries

    Directory of Open Access Journals (Sweden)

    Timothy G. O'Higgins

    2010-12-01

    Full Text Available Little is known about the variability of ecosystem service values at spatial scales most relevant to local decision makers. Competing definitions of ecosystem services, the paucity of ecological and economic information, and the lack of standardization in methodology are major obstacles to applying the ecosystem-services approach at the estuary scale. We present a standardized method that combines habitat maps and habitat-faunal associations to estimate ecosystem service values for recreational and commercial fisheries in estuaries. Three case studies in estuaries on the U.S. west coast (Yaquina Bay, Oregon, east coast (Lagoon Pond, Massachusetts, and the Gulf of Mexico (Weeks Bay, Alabama are presented to illustrate our method's rigor and limitations using available data. The resulting spatially explicit maps of fisheries ecosystem service values show within and between estuary variations in the value of estuarine habitat types that can be used to make better informed resource-management decisions.

  9. Fish and Salinity in the San Francisco Estuary

    Science.gov (United States)

    This page provides access to a set of time-series maps for six fishes that live in the SF Estuary. Maps were produced to strengthen best available science that inform actions needed to improve protection for aquatic life.

  10. Salt marsh vegetation: examples from the Tijuana estuary

    National Research Council Canada - National Science Library

    Zedler, J.B

    Using the Tijuana Estuary in southern California as an example, this booklet describes salt marsh vegetation and explains how marsh plants are able to tolerate the stresses of their variable environment...

  11. The ecology of Tijuana Estuary, California: An estuarine profile

    Energy Technology Data Exchange (ETDEWEB)

    Zedler, J.B.; Nordby, C.S.

    1986-06-01

    This is the first attempt to synthesize and interpret a rapidly growing data base on the estuary's diverse biota - its vegetation, algae, birds, fishes, and invertebrates. Because so many changes have occurred in response to recent catastrophic events, we describe how each aspect of the estuary appeared before 1980 and how it has responded to several perturbations. The experimental tests of these cause-effect relationships have not been completed, and there is little reason to expect that environmental conditions have stabilized or that new types of disturbances won't occur. Thus, this profile should be viewed as a stage in the process of understanding Tijuana Estuary. Like the estuary itself, our knowledge is continuously evolving.

  12. St. Louis River Estuary 2011 - 2013 Faucet snail location data

    Data.gov (United States)

    U.S. Environmental Protection Agency — The dataset consists of GPS coordinates for benthic invertebrate collections made in the St. Louis River Estuary in 2011 through 2013, and information on whether and...

  13. Evaluating Causes of Ecological Impairments in the Estuaries of Ukraine

    Science.gov (United States)

    Ukrainian estuaries have not undergone a systematic evaluation of the causes of ecological impairments caused by anthropogenic contamination. The objective of this evaluation is to use recently developed diagnostic tools to determine the causes of benthic ecological impairments. ...

  14. Assessing the impact of human activities on British Columbia's estuaries.

    Science.gov (United States)

    Robb, Carolyn K

    2014-01-01

    The world's marine and coastal ecosystems are under threat and single-sector management efforts have failed to address those threats. Scientific consensus suggests that management should evolve to focus on ecosystems and their human, ecological, and physical components. Estuaries are recognized globally as one of the world's most productive and most threatened ecosystems and many estuarine areas in British Columbia (BC) have been lost or degraded. To help prioritize activities and areas for regional management efforts, spatial information on human activities that adversely affect BC's estuaries was compiled. Using statistical analyses, estuaries were assigned to groups facing related threats that could benefit from similar management. The results show that estuaries in the most populated marine ecosections have the highest biological importance but also the highest impacts and the lowest levels of protection. This research is timely, as it will inform ongoing marine planning, land acquisition, and stewardship efforts in BC.

  15. Toxicity of sediments and pore water from Brunswick Estuary, GA

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — A chlor-alkali plant in Brunswick, Ga, discharged >2 kg mercury/day into a tributary of the Turtle River-Brunswick Estuary from 1966 to 1971. Mercury...

  16. Interactions between walleyes and smallmouth bass in a Missouri River reservoir with consideration of the influence of temperature and prey

    Science.gov (United States)

    Wuellner, Melissa R.; Chipps, Steven R.; Willis, David W.; Adams, Wells E.

    2010-01-01

    Walleyes Sander vitreus are the most popular fish among South Dakota anglers, but smallmouth bass Micropterus dolomieu were introduced to provide new angling opportunities. Some walleye anglers have reported reductions in the quality of walleye fisheries since the introduction of smallmouth bass and attribute this to the consumption of young walleyes by smallmouth bass and competition for shared prey resources. We quantified the diets of walleyes and smallmouth bass in the lower reaches of Lake Sharpe (a Missouri River reservoir), calculated the diet overlap between the two predators, and determined whether they partitioned shared prey based on size. We also quantified walleye diets in the upper reach of the reservoir, which has a different prey base and allowed us to compare the growth rates of walleyes within Lake Sharpe. Age-0 gizzard shad Dorosoma cepedianum composed a substantial proportion of the diets of both predators, regardless of location, for most of the growing season; the patterns in shad vulnerability appeared to drive the observed patterns in diet overlap. Smallmouth bass appeared to consume a smaller size range of gizzard shad than did walleyes, which consumed a wide range. Smallmouth bass consumed Sander spp. in some months, but in very low quantities. Given that global climate change is expected to alter the population and community dynamics in Great Plains reservoirs, we also used a bioenergetics approach to predict the potential effects of limiting prey availability (specifically, the absence of gizzard shad and rainbow smelt Osmerus mordax) and increased water temperatures (as projected from global climate change models) on walleye and smallmouth bass growth. The models indicated that the absence of rainbow smelt from the diets of walleyes in upper Lake Sharpe would reduce growth but that the absence of gizzard shad would have a more marked negative effect on both predators at both locations. The models also indicated that higher

  17. Localised residency and inter-annual fidelity to coastal foraging areas may place sea bass at risk to local depletion

    Science.gov (United States)

    Doyle, Thomas K.; Haberlin, Damien; Clohessy, Jim; Bennison, Ashley; Jessopp, Mark

    2017-04-01

    For many marine migratory fish, comparatively little is known about the movement of individuals rather than the population. Yet, such individual-based movement data is vitally important to understand variability in migratory strategies and fidelity to foraging locations. A case in point is the economically important European sea bass (Dicentrarchus labrax L.) that inhabits coastal waters during the summer months before migrating offshore to spawn and overwinter. Beyond this broad generalisation we have very limited information on the movements of individuals at coastal foraging grounds. We used acoustic telemetry to track the summer movements and seasonal migrations of individual sea bass in a large tidally and estuarine influenced coastal environment. We found that the vast majority of tagged sea bass displayed long-term residency (mean, 167 days) and inter-annual fidelity (93% return rate) to specific areas. We describe individual fish home ranges of 3 km or less, and while fish clearly had core resident areas, there was movement of fish between closely located receivers. The combination of inter-annual fidelity to localised foraging areas makes sea bass very susceptible to local depletion; however, the designation of protected areas for sea bass may go a long way to ensuring the sustainability of this species.

  18. Localised residency and inter-annual fidelity to coastal foraging areas may place sea bass at risk to local depletion.

    Science.gov (United States)

    Doyle, Thomas K; Haberlin, Damien; Clohessy, Jim; Bennison, Ashley; Jessopp, Mark

    2017-04-04

    For many marine migratory fish, comparatively little is known about the movement of individuals rather than the population. Yet, such individual-based movement data is vitally important to understand variability in migratory strategies and fidelity to foraging locations. A case in point is the economically important European sea bass (Dicentrarchus labrax L.) that inhabits coastal waters during the summer months before migrating offshore to spawn and overwinter. Beyond this broad generalisation we have very limited information on the movements of individuals at coastal foraging grounds. We used acoustic telemetry to track the summer movements and seasonal migrations of individual sea bass in a large tidally and estuarine influenced coastal environment. We found that the vast majority of tagged sea bass displayed long-term residency (mean, 167 days) and inter-annual fidelity (93% return rate) to specific areas. We describe individual fish home ranges of 3 km or less, and while fish clearly had core resident areas, there was movement of fish between closely located receivers. The combination of inter-annual fidelity to localised foraging areas makes sea bass very susceptible to local depletion; however, the designation of protected areas for sea bass may go a long way to ensuring the sustainability of this species.

  19. Impact of entrainment and impingement on fish populations in the Hudson River estuary. Volume III. An analysis of the validity of the utilities' stock-recruitment curve-fitting exercise and prior estimation of beta technique. Environmental Sciences Division publication No. 1792

    Energy Technology Data Exchange (ETDEWEB)

    Christensen, S. W.; Goodyear, C. P.; Kirk, B. L.

    1982-03-01

    This report addresses the validity of the utilities' use of the Ricker stock-recruitment model to extrapolate the combined entrainment-impingement losses of young fish to reductions in the equilibrium population size of adult fish. In our testimony, a methodology was developed and applied to address a single fundamental question: if the Ricker model really did apply to the Hudson River striped bass population, could the utilities' estimates, based on curve-fitting, of the parameter alpha (which controls the impact) be considered reliable. In addition, an analysis is included of the efficacy of an alternative means of estimating alpha, termed the technique of prior estimation of beta (used by the utilities in a report prepared for regulatory hearings on the Cornwall Pumped Storage Project). This validation methodology should also be useful in evaluating inferences drawn in the literature from fits of stock-recruitment models to data obtained from other fish stocks.

  20. Biological effects of anthropogenic contaminants in the San Francisco Estuary

    Science.gov (United States)

    Thompson, B.; Adelsbach, T.; Brown, C.; Hunt, J.; Kuwabara, J.; Neale, J.; Ohlendorf, H.; Schwarzbach, S.; Spies, R.; Taberski, K.

    2007-01-01

    Concentrations of many anthropogenic contaminants in the San Francisco Estuary exist at levels that have been associated with biological effects elsewhere, so there is a potential for them to cause biological effects in the Estuary. The purpose of this paper is to summarize information about biological effects on the Estuary's plankton, benthos, fish, birds, and mammals, gathered since the early 1990s, focusing on key accomplishments. These studies have been conducted at all levels of biological organization (sub-cellular through communities), but have included only a small fraction of the organisms and contaminants of concern in the region. The studies summarized provide a body of evidence that some contaminants are causing biological impacts in some biological resources in the Estuary. However, no general patterns of effects were apparent in space and time, and no single contaminant was consistently related to effects among the biota considered. These conclusions reflect the difficulty in demonstrating biological effects due specifically to contamination because there is a wide range of sensitivity to contaminants among the Estuary's many organisms. Additionally, the spatial and temporal distribution of contamination in the Estuary is highly variable, and levels of contamination covary with other environmental factors, such as freshwater inflow or sediment-type. Federal and State regulatory agencies desire to develop biological criteria to protect the Estuary's biological resources. Future studies of biological effects in San Francisco Estuary should focus on the development of meaningful indicators of biological effects, and on key organism and contaminants of concern in long-term, multifaceted studies that include laboratory and field experiments to determine cause and effect to adequately inform management and regulatory decisions. ?? 2006 Elsevier Inc. All rights reserved.

  1. The recreational value of river inflows into South African estuaries

    African Journals Online (AJOL)

    From the elicited responses median estuary user willingness to pay bids were predicted using. Tobit and OLS ... median values of river inflow into estuaries was calculated to be 3.4 c/m3 (South African cents, ZAR) and standard devia- tion 3.84 c/m3. .... forestry expansion and by-products, and has taken the form of reduced ...

  2. Juvenile salmon usage of the Skeena River estuary.

    Directory of Open Access Journals (Sweden)

    Charmaine Carr-Harris

    Full Text Available Migratory salmon transit estuary habitats on their way out to the ocean but this phase of their life cycle is more poorly understood than other phases. The estuaries of large river systems in particular may support many populations and several species of salmon that originate from throughout the upstream river. The Skeena River of British Columbia, Canada, is a large river system with high salmon population- and species-level diversity. The estuary of the Skeena River is under pressure from industrial development, with two gas liquefaction terminals and a potash loading facility in various stages of environmental review processes, providing motivation for understanding the usage of the estuary by juvenile salmon. We conducted a juvenile salmonid sampling program throughout the Skeena River estuary in 2007 and 2013 to investigate the spatial and temporal distribution of different species and populations of salmon. We captured six species of juvenile anadromous salmonids throughout the estuary in both years, and found that areas proposed for development support some of the highest abundances of some species of salmon. Specifically, the highest abundances of sockeye (both years, Chinook in 2007, and coho salmon in 2013 were captured in areas proposed for development. For example, juvenile sockeye salmon were 2-8 times more abundant in the proposed development areas. Genetic stock assignment demonstrated that the Chinook salmon and most of the sockeye salmon that were captured originated from throughout the Skeena watershed, while some sockeye salmon came from the Nass, Stikine, Southeast Alaska, and coastal systems on the northern and central coasts of British Columbia. These fish support extensive commercial, recreational, and First Nations fisheries throughout the Skeena River and beyond. Our results demonstrate that estuary habitats integrate species and population diversity of salmon, and that if proposed development negatively affects the

  3. Contamination and restoration of an estuary affected by phosphogypsum releases

    Energy Technology Data Exchange (ETDEWEB)

    Villa, M., E-mail: mvilla@us.es [Centro de Investigacion, Tecnologia e Innovacion, Universidad de Sevilla CITIUS, Av. Reina Mercedes 4B, E41012-Sevilla (Spain); Mosqueda, F. [Dpto. de Fisica Aplicada, Facultad de Ciencias Experimentales, Universidad de Huelva, Campus de El Carmen, 21007-Huelva (Spain); Hurtado, S. [Centro de Investigacion, Tecnologia e Innovacion, Universidad de Sevilla CITIUS, Av. Reina Mercedes 4B, E41012-Sevilla (Spain); Mantero, J.; Manjon, G. [E. T. S. Arquitectura, Universidad de Sevilla, Departamento de Fisica Aplicada II, Av. Reina Mercedes, 2. 41012-Sevilla (Spain); Perianez, R. [E.U.I.T.A., Universidad de Sevilla, Departamento de Fisica Aplicada III, Carretera de Utrera, Km. 1, 41013 Sevilla (Spain); Vaca, F. [Dpto. de Fisica Aplicada, Facultad de Ciencias Experimentales, Universidad de Huelva, Campus de El Carmen, 21007-Huelva (Spain); Garcia-Tenorio, R. [E. T. S. Arquitectura, Universidad de Sevilla, Departamento de Fisica Aplicada II, Av. Reina Mercedes, 2. 41012-Sevilla (Spain)

    2009-12-15

    The Huelva Estuary in Huelva, Spain, has been one of the most studied environmental compartments in the past years from the point of view of naturally occurring radioactive material (NORM) releases. It has been historically affected by waste releases, enriched in radionuclides from the U-decay series, from factories located in the area devoted to the production of phosphoric acid and phosphate fertilizers. Nevertheless, changes in national regulations forced a new waste management practice in 1998, prohibiting releases of phosphogypsum into the rivers. The input of natural radionuclides from phosphate factories to rivers was drastically reduced. Because of this there was a unique opportunity for the study of the response of a contaminated environmental compartment, specifically an estuary affected by tidal influences, after the cessation of the contaminant releases to, in this case, the Huelva Estuary (henceforth referred to as the Estuary). To investigate the environmental response to this new discharge regime, the specific activities of radionuclides {sup 226}Ra and {sup 210}Pb in water and sediment samples collected in four campaigns (from 1999 to 2005) were determined and compared with pre-1998 values. From this study it is possible to infer the most effective mechanisms of decontamination for the Estuary. Decontamination rates of {sup 210}Pb and {sup 226}Ra in the sediments and water have been calculated using exponential fittings and corresponding half-lives have been deduced from them. The cleaning half-life in the whole area of the Estuary is about 6 and 3.5 years for {sup 226}Ra and {sup 210}Pb respectively. The observed trend clearly shows that contamination of the Estuary by natural radionuclides is now decreasing and radioactive levels in waters and sediments are approaching the natural background references. This work attempts to evaluate whether it can be expected that the decontamination of the enhanced levels of natural radioactivity in the Estuary

  4. Hydro-morphological modelling of small, wave-dominated estuaries

    Science.gov (United States)

    Slinger, Jill H.

    2017-11-01

    Small, intermittently open or closed estuaries are characteristic of the coasts of South Africa, Australia, California, Mexico and many other areas of the world. However, modelling attention has tended to focus on big estuaries that drain large catchments and serve a wide diversity of interests e.g. agriculture, urban settlement, recreation, commercial fishing. In this study, the development of a simple, parametric, system dynamics model to simulate the opening and closure of the mouths of small, wave-dominated estuaries is reported. In the model, the estuary is conceived as a basin with a specific water volume to water level relationship, connected to the sea by a channel of fixed width, but variable sill height. Changes in the form of the basin are not treated in the model, while the dynamics of the mouth channel are central to the model. The magnitude and direction of the flow through the mouth determines whether erosion or deposition of sediment occurs in the mouth channel, influencing the sill height. The model is implemented on the Great Brak Estuary in South Africa and simulations reveal that the raised low water levels in the estuary during spring tide relative to neap tide, are occasioned by the constriction of the tidal flow through the shallow mouth. Freshwater inflows to the estuary are shown to be significant in determining the behaviour of the inlet mouth, a factor often ignored in studies on tidal inlets. Further it is the balance between freshwater inflows and wave events that determines the opening or closure of the mouth of a particular estuary.

  5. [The benthic fauna of Sabancuy Estuary, Campeche, Mexico].

    Science.gov (United States)

    González Solís, A; Torruco Gómez, D

    2001-03-01

    The fish and invertebrates community structure in the Sabancuy estuary was analyzed in two seasons and 14 sampling stations (13 along the estuary and one in the marine adjacent coast). No significant differences were found between seasons. The environmental frame defines two zones within the estuary, the first extends from the access highway to Sabancuy town until the Pujo mouth in the west; the second from the bridge to the estuary head in the east. The most abundant invertebrates were mollusks (51.8% of the total), in biomass the crustaceans dominated. The fish included 21 families and 33 species; the most abundant were Gerridae, Scianidae, Sparidae, Lutjanidae and Ciprinodontidae. The highest diversities of both communities correspond to the central part of the estuary. These communities include three sections with notable differences in faunal distribution: one is influenced by the exit to Terminos lagoon, the secondary in the estuary head and a third is in a transition zone defined by the proximity of the town access bridge. The ecological organization suggests a strong division caused by the bridge, both sides are scarce in habitats and nutrient resources and this is reflected in the low species counts.

  6. Sources, Ages, and Alteration of Organic Matter in Estuaries.

    Science.gov (United States)

    Canuel, Elizabeth A; Hardison, Amber K

    2016-01-01

    Understanding the processes influencing the sources and fate of organic matter (OM) in estuaries is important for quantifying the contributions of carbon from land and rivers to the global carbon budget of the coastal ocean. Estuaries are sites of high OM production and processing, and understanding biogeochemical processes within these regions is key to quantifying organic carbon (Corg) budgets at the land-ocean margin. These regions provide vital ecological services, including nutrient filtration and protection from floods and storm surge, and provide habitat and nursery areas for numerous commercially important species. Human activities have modified estuarine systems over time, resulting in changes in the production, respiration, burial, and export of Corg. Corg in estuaries is derived from aquatic, terrigenous, and anthropogenic sources, with each source exhibiting a spectrum of ages and lability. The complex source and age characteristics of Corg in estuaries complicate our ability to trace OM along the river-estuary-coastal ocean continuum. This review focuses on the application of organic biomarkers and compound-specific isotope analyses to estuarine environments and on how these tools have enhanced our ability to discern natural sources of OM, trace their incorporation into food webs, and enhance understanding of the fate of Corg within estuaries and their adjacent waters.

  7. X-ray resonant magnetic scattering study of magnetic stripe domains in a-GdFe thin films

    Science.gov (United States)

    Miguel, J.; Peters, J. F.; Toulemonde, O. M.; Dhesi, S. S.; Brookes, N. B.; Goedkoop, J. B.

    2006-09-01

    X-ray resonant magnetic scattering (XRMS) has been used to investigate the structure of magnetic stripe domain patterns in thin amorphous GdFe films. Under the influence of a perpendicular magnetic field, the scattered intensity displays a smooth transition from a structure factor of correlated stripes to the form factor of isolated domains. We derive a quite general expression that relates the total scattered intensity of XRMS to the absolute value of the magnetization. Furthermore, we compare our results for the domain period with domain theory. We obtain good agreement for prealigned stripes, but disorder tends to lead to an overestimation of the period measured with XRMS.

  8. Detection, Occurrence, and Survey of Rice Stripe and Black-Streaked Dwarf Diseases in Zhejiang Province, China

    Directory of Open Access Journals (Sweden)

    Heng-mu ZHANG

    2013-11-01

    Full Text Available The major viral diseases that occur on rice plants in Zhejiang Province, eastern China, are stripe and rice black-streaked dwarf diseases. Rice stripe disease is only caused by rice stripe tenuivirus (RSV, while rice black-streaked dwarf disease can be caused by rice black-streaked dwarf fijivirus (RBSDV and/or southern rice black-streaked dwarf fijivirus (SRBSDV. Here we review the characterization of these viruses, methods for their detection, and extensive surveys showing their occurrence and spread in the province.

  9. DEVELOPMENT OF A SMALLMOUTH BASS QUANTITATIVE REAL-TIME PCR ASSAY TO MEASURE VTG GENE INDUCTION IN MALE FISH FROM THE SOUTH BRANCH OF THE POTOMAC RIVER

    Science.gov (United States)

    A high incidence of intersex bass, primarily male smallmouth bass with previtellogenic oocytes, exists in the south branch of the Potomac River. Exposures to endocrine disrupting chemicals (EDCs) may be the cause of these abnormalities. Potential sources of EDCs to the river are ...

  10. Ig light chain variability in DNP494-KLH immunised sea bass (Dicentrarchus labrax L.) : evidence for intra-molecular induced suppression

    NARCIS (Netherlands)

    Santos, dos N.M.S.; Hermsen, T.; Rombout, J.H.W.M.; Pilström, L.; Stet, R.J.M.

    2001-01-01

    The coding sequence of the sea bass light chain was obtained by sequential anchored PCR on a head kidney cDNA library of a DNP494-KLH immunised sea bass. The cDNA sequence obtained codes for a leader peptide of 21 aa and a mature IgL chain of 223 aa. Both the amino acid sequence comparisons and

  11. Probable movement and mixing of contaminants in tidal estuaries - A field study in Kundalika Estuary, west coast of India

    Digital Repository Service at National Institute of Oceanography (India)

    DineshKumar, P; Sarma, R.V.; Zingde, M.D.

    The probable movement and mixing of contaminants within and through the Kundalika river estuary along the west coast of India are studied Neutrally buoyant biplane drogues, floats and dye were tracked at different stages of the tide to assess...

  12. Variation and plasticity and their interaction with urbanization in Guadalupe Bass populations on and off the Edwards Plateau

    Science.gov (United States)

    Pease, Jessica E.; Grabowski, Timothy B.; Pease, Allison A.

    2017-01-01

    The Colorado River Basin in Texas has experienced major alterations to its hydrologic regime due to changing land and water use patterns. These anthropogenic influences on hydrologic variability have had major implications for riparian and aquatic ecosystems and the species dependent upon them. However, impacts are often assessed at a limited temporal and spatial scale, tending to focus on relatively short and discrete periods or portions of a river basin. It is not clear how basin-wide alterations occurring over decades affect species. Guadalupe Bass Micropterus treculii are endemic to central Texas and are typically associated with shallow runs and riffles in small streams. However, Guadalupe Bass are found throughout the Colorado River Basin, including the mainstem portion of the lower river downstream of the city of Austin where they support a popular fishery. Because Guadalupe Bass exist across a wide range of stream orders within the basin, it is unclear whether populations respond similarly to anthropogenic disturbances or to conservation and restoration activities. Therefore, our objectives were to:Assess the effects of urbanization and hydrology on the population structure and dynamics of Guadalupe Bass.Evaluate the effects of environmental gradients on ecomorphological variation in Guadalupe Bass populations across multiple spatial scales.Describe the life history, habitat use, and behavior of the Guadalupe Bass population in the lower Colorado River and compare it to populations in more “typical” habitats.Results contribute to an understanding of the response of Guadalupe Bass to anthropogenic disturbances, including increased urbanization in central Texas and further assist in the conservation of the species. The ability of the population to not only persist, but flourish downstream of a heavily populated urban area presented a unique opportunity to investigate a native species response to anthropogenic disturbance. This research revealed

  13. NEW DATA ABOUT MACROZOOBENTHOS OF BEYSUGSKY ESTUARY (SEA OF AZOV

    Directory of Open Access Journals (Sweden)

    N. I. Bulysheva

    2013-01-01

    Full Text Available Abstract. Aim. Beysugsky Estuary is one of the biggest estuaries of the Azov-Kuban’ lowland. Like the other water bodies in the South of Russia, this one is subject to strong anthropogenic load: detachment of the freshwater part for establishing the Beysug spawning area; regulation of the flow of the rivers feeding the estuary; destruction of the Yasenskaya spit and narrowing of the Bugaz mouth; disorganized tourism. The ongoing reformation of the ecosystem makes it necessary to carry out the analyses of the modern state of the biota of this water body and uncover reasons and regularities of its change.Location. Beysug Estuary of the Sea of Azov.Methods. Quantitative zoobenthos samples were taken with the Petersen dredger (sampling area 0,034 m2 from board of the inflatable “Zodiac” boat. Qualitative samples were taken in the coastal zone by hand and with the dredge. All the samples taken were washed through the bag made of mill sieve with mesh size 0,5 mm, and then were fixed in a plastic bucket by 4 % formaldehyde (quantitative samples or 70 % ethyl alcohol (qualitative samples. Taking and processing of samples were carried out in field and laboratory environment using common methods. 22 samples at 7 stations were taken in total.Results. Macrozoobenthos was presented by 14 invertebrate species. Estuarine fauna is the depleted version of the euryhaline one of the Sea of Azov with Holocene relic macrophyte-dwelling elements. Biodiversity and quantitative characters of the estuarine communities decrease from west to east. Pelophylic detritophages predominated in the benthic communities of the estuary. The results of this research are meant to be used for uncovering historical ways of forming of benthic fauna and clearing up the dependence of community structure on the seawater influence, freshwater flow, regulation of freshwater and seawater sources, nature of changing of faunas at salinization of estuaries connected with the sea and the

  14. Global patterns and predictors of fish species richness in estuaries.

    Science.gov (United States)

    Vasconcelos, Rita P; Henriques, Sofia; França, Susana; Pasquaud, Stéphanie; Cardoso, Inês; Laborde, Marina; Cabral, Henrique N

    2015-09-01

    1. Knowledge of global patterns of biodiversity and regulating variables is indispensable to develop predictive models. 2. The present study used predictive modelling approaches to investigate hypotheses that explain the variation in fish species richness between estuaries over a worldwide spatial extent. Ultimately, such models will allow assessment of future changes in ecosystem structure and function as a result of environmental changes. 3. A comprehensive worldwide data base was compiled of the fish assemblage composition and environmental characteristics of estuaries. Generalized Linear Models were used to quantify how variation in species richness among estuaries is related to historical events, energy dynamics and ecosystem characteristics, while controlling for sampling effects. 4. At the global extent, species richness differed among marine biogeographic realms and continents and increased with mean sea surface temperature, terrestrial net primary productivity and the stability of connectivity with a marine ecosystem (open vs. temporarily open estuaries). At a smaller extent (within a marine biogeographic realm or continent), other characteristics were also important in predicting variation in species richness, with species richness increasing with estuary area and continental shelf width. 5. The results suggest that species richness in an estuary is defined by predictors that are spatially hierarchical. Over the largest spatial extents, species richness is influenced by the broader distributions and habitat use patterns of marine and freshwater species that can colonize estuaries, which are in turn governed by history contingency, energy dynamics and productivity variables. Species richness is also influenced by more regional and local parameters that can further affect the process of community colonization in an estuary including the connectivity of the estuary with the adjacent marine habitat, and, over smaller spatial extents, the size of these

  15. [Identification and classification of disease severity of wheat stripe rust using near infrared spectroscopy technology].

    Science.gov (United States)

    Li, Xiao-long; Qin, Feng; Zhao, Long-lian; Li, Jun-hui; Ma, Zhan-hong; Wang, Hai-guang

    2015-02-01

    Wheat stripe rust caused by Puccinia striiformis f. sp. tritici, is an economically important disease in the world. It is of great significance to assess disease severity of wheat stripe rust quickly and accurately for monitoring and controlling the disease. In this study, wheat leaves infected with stripe rust pathogen under different severity levels were acquired through artificial inoculation in artificial climate chamber. Thirty wheat leaves with disease severity equal to 1%, 5%, 10%, 20%, 40%, 60%, 80% or 100% were picked out, respectively, and 30 healthy leaves were chosen as controls. A total of 270 wheat leaves were obtained and then their near infrared spectra were measured using MPA spectrometer. According to disease severity levels, 270 near infrared spectra were divided into 9 categories and each category included 30 spectra. From each category, 7 or 8 spectra were randomly chosen to make up the testing set that included 67 spectra. The remaining spectra were treated as the training set. A qualitative model for identification and classification of disease severity of wheat stripe rust was built using near infrared reflectance spectroscopy (NIRS) technology combined with discriminant partial least squares (DPLS). The effects of different preprocessing methods of obtained spectra, ratios between training sets and testing sets, and spectral ranges on qualitative recognition results of the model were investigated. The optimal model based on DPLS was built using cross verification method in the spectral region of 4000-9000 cm(-1) when "centralization" was used as the preprocessing method of spectra and the spectra were divided into the training set and the testing set with the ratio equal to 3:1. Accuracy rate of the training set was 95.57% and accuracy rate of the testing set was 97.01%. The results showed that good recognition performance could be acquired using the model based on DPLS. The results indicated that the method using near infrared reflectance

  16. There's More to Groove than Bass in Electronic Dance Music: Why Some People Won't Dance to Techno.

    Directory of Open Access Journals (Sweden)

    Brian C Wesolowski

    Full Text Available The purpose of this study was to explore the relationship between audio descriptors for groove-based electronic dance music (EDM and raters' perceived cognitive, affective, and psychomotor responses. From 198 musical excerpts (length: 15 sec. representing 11 subgenres of EDM, 19 low-level audio feature descriptors were extracted. A principal component analysis of the feature vectors indicated that the musical excerpts could effectively be classified using five complex measures, describing the rhythmical properties of: (a the high-frequency band, (b the mid-frequency band, and (c the low-frequency band, as well as overall fluctuations in (d dynamics, and (e timbres. Using these five complex audio measures, four meaningful clusters of the EDM excerpts emerged with distinct musical attributes comprising music with: (a isochronous bass and static timbres, (b isochronous bass with fluctuating dynamics and rhythmical variations in the mid-frequency range, (c non-isochronous bass and fluctuating timbres, and (d non-isochronous bass with rhythmical variations in the high frequencies. Raters (N = 99 were each asked to respond to four musical excerpts using a four point Likert-Type scale consisting of items representing cognitive (n = 9, affective (n = 9, and psychomotor (n = 3 domains. Musical excerpts falling under the cluster of "non-isochronous bass with rhythmical variations in the high frequencies" demonstrated the overall highest composite scores as evaluated by the raters. Musical samples falling under the cluster of "isochronous bass with static timbres" demonstrated the overall lowest composite scores as evaluated by the raters. Moreover, music preference was shown to significantly affect the systematic patterning of raters' responses for those with a musical preference for "contemporary" music, "sophisticated" music, and "intense" music.

  17. There's More to Groove than Bass in Electronic Dance Music: Why Some People Won't Dance to Techno.

    Science.gov (United States)

    Wesolowski, Brian C; Hofmann, Alex

    2016-01-01

    The purpose of this study was to explore the relationship between audio descriptors for groove-based electronic dance music (EDM) and raters' perceived cognitive, affective, and psychomotor responses. From 198 musical excerpts (length: 15 sec.) representing 11 subgenres of EDM, 19 low-level audio feature descriptors were extracted. A principal component analysis of the feature vectors indicated that the musical excerpts could effectively be classified using five complex measures, describing the rhythmical properties of: (a) the high-frequency band, (b) the mid-frequency band, and (c) the low-frequency band, as well as overall fluctuations in (d) dynamics, and (e) timbres. Using these five complex audio measures, four meaningful clusters of the EDM excerpts emerged with distinct musical attributes comprising music with: (a) isochronous bass and static timbres, (b) isochronous bass with fluctuating dynamics and rhythmical variations in the mid-frequency range, (c) non-isochronous bass and fluctuating timbres, and (d) non-isochronous bass with rhythmical variations in the high frequencies. Raters (N = 99) were each asked to respond to four musical excerpts using a four point Likert-Type scale consisting of items representing cognitive (n = 9), affective (n = 9), and psychomotor (n = 3) domains. Musical excerpts falling under the cluster of "non-isochronous bass with rhythmical variations in the high frequencies" demonstrated the overall highest composite scores as evaluated by the raters. Musical samples falling under the cluster of "isochronous bass with static timbres" demonstrated the overall lowest composite scores as evaluated by the raters. Moreover, music preference was shown to significantly affect the systematic patterning of raters' responses for those with a musical preference for "contemporary" music, "sophisticated" music, and "intense" music.

  18. Molecular cloning and characterization of sea bass (Dicentrarchus labrax, L.) Tapasin.

    Science.gov (United States)

    Pinto, Rute D; da Silva, Diogo V; Pereira, Pedro J B; dos Santos, Nuno M S

    2012-01-01

    Mammalian tapasin (TPN) is a key member of the major histocompatibility complex (MHC) class I antigen presentation pathway, being part of the multi-protein complex called the peptide loading complex (PLC). Several studies describe its important roles in stabilizing empty MHC class I complexes, facilitating peptide loading and editing the repertoire of bound peptides, with impact on CD8(+) T cell immune responses. In this work, the gene and cDNA of the sea bass (Dicentrarchus labrax) glycoprotein TPN have been isolated and characterized. The coding sequence has a 1329 bp ORF encoding a 442-residue precursor protein with a predicted 24-amino acid leader peptide, generating a 418-amino acid mature form that retains a conserved N-glycosylation site, three conserved mammalian tapasin motifs, two Ig superfamily domains, a transmembrane domain and an ER-retention di-lysine motif at the C-terminus, suggestive of a function similar to mammalian tapasins. Similar to the human counterpart, the sea bass TPN gene comprises 8 exons, some of which correspond to separate functional domains of the protein. A three-dimensional homology model of sea bass tapasin was calculated and is consistent with the structural features described for the human molecule. Together, these results support the concept that the basic structure of TPN has been maintained through evolution. Moreover, the present data provides information that will allow further studies on cell-mediated immunity and class I antigen presentation pathway in particular, in this important fish species. Copyright © 2011 Elsevier Ltd. All rights reserved.

  19. The ΓX-L/LEdd relation in BAT AGN Spectroscopic Survey (BASS)

    Science.gov (United States)

    Trakhtenbrot, Benny; Ricci, Claudio; Koss, Michael; Schawinski, Kevin; Mushotzky, Richard; Ueda, Yoshihiro; Veilleux, Sylvain; Lamperti, Isabella; Oh, Kyuseok; Treister, Ezequiel; Stern, Daniel; Harrison, Fiona; Balokovic, Mislav

    2018-01-01

    We present a study of the relation between accretion rate (in terms of L/LEdd) and shape of the hard X-ray spectral energy distribution (namely the photon index Γx) for a large sample of over 200 hard X-ray-selected, low-redshift active galactic nuclei (AGNs), drawn from the Swift/BAT AGN Spectroscopic Survey (BASS). This includes 30 AGNs for which black hole mass (and therefore L/LEdd) is measured directly through masers, spatially resolved gas or stellar dynamics, or reverberation mapping. The high-quality and broad energy coverage of the data provided through BASS allow us to examine several alternative determinations of both Γx and L/LEdd. We find very weak correlation between Γx and L/LEdd for the BASS sample as a whole, with best-fitting relations that are considerably shallower than those reported in previous studies. Moreover, we find no corresponding correlations among the subsets of AGN with different MBH determination methodology, and in particular those AGN with direct or single-epoch MBH estimates. This latter finding is in contrast to several previous studies which focused on z > 0.5 broad-line AGN. We conclude that this tension can be partially accounted for if one adopts a simplified, power-law X-ray spectral model, combined with L/LEdd estimates that are based on the continuum emission and on single-epoch broad-line spectroscopy in the optical regime. Given these findings, we highlight the limitations of using Γx as a probe of supermassive black hole evolution in deep extragalactic X-ray surveys.

  20. A redescription of Myxobolus inornatus from young-of-the-year smallmouth bass (Micropterus dolomieu).

    Science.gov (United States)

    Walsh, H L; Blazer, V S; Iwanowicz, L R; Smith, G

    2012-12-01

    During investigations of young-of-the year smallmouth bass ( Micropterus dolomieu ) mortalities in the Susquehanna River, Pennsylvania, U.S.A. and affected tributaries, raised areas were noted in the muscle in the vicinity of the caudal peduncle. The raised areas were caused by plasmodia of a myxozoan parasite. Spores found within plasmodia were similar to those of Myxobolus inornatus previously described from the caudal peduncle of fingerling largemouth bass ( Micropterus salmoides ) in Montana. Here, M. inornatus is redescribed based on histologic comparisons and spore measurements. The addition of spore photographs, line drawings, a voucher specimen, and partial small-subunit ribosomal (rSSU) DNA gene sequence are new in this study. This is also the first description of M. inornatus from smallmouth bass. The plasmodia of M. inornatus were grossly observed at the base of the caudal and dorsal fins and were 280.3 ± 33.5 (range 77.1-920.3) μm long and 320.6 ± 41.0 (range 74.85-898.4) μm wide. In some instances, plasmodia of M. inornatus were large enough to rupture the epidermis or were associated with misaligned vertebrae. The slightly pyriform spores were 11.3 ± 0.2 (range 8.6-17.4) μm in length and 8.6 ± 0.2 (range 7.1-13.7) μm wide with an iodinophilous vacuole and a sutural ridge with 8 to 10 sutural folds. The SSU rDNA gene sequence places M. inornatus in a sister group with Myxobolus osburni .

  1. BAT AGN Spectroscopic Survey (BASS) - VI. The ΓX-L/LEdd relation

    Science.gov (United States)

    Trakhtenbrot, Benny; Ricci, Claudio; Koss, Michael J.; Schawinski, Kevin; Mushotzky, Richard; Ueda, Yoshihiro; Veilleux, Sylvain; Lamperti, Isabella; Oh, Kyuseok; Treister, Ezequiel; Stern, Daniel; Harrison, Fiona; Baloković, Mislav; Gehrels, Neil

    2017-09-01

    We study the relation between accretion rate (in terms of L/LEdd) and shape of the hard X-ray spectral energy distribution (namely the photon index Γx) for a large sample of 228 hard X-ray-selected, low-redshift active galactic nuclei (AGNs), drawn from the Swift/BAT AGN Spectroscopic Survey (BASS). This includes 30 AGNs for which black hole mass (and therefore L/LEdd) is measured directly through masers, spatially resolved gas or stellar dynamics, or reverberation mapping. The high-quality and broad energy coverage of the data provided through BASS allow us to examine several alternative determinations of both Γx and L/LEdd. For the BASS sample as a whole, we find a statistically significant, albeit very weak correlation between Γx and L/LEdd. The best-fitting relations we find, Γx ≃ 0.15 log L/LEdd + const., are considerably shallower than those reported in previous studies. Moreover, we find no corresponding correlations among the subsets of AGN with different MBH determination methodology. In particular, we find no robust evidence for a correlation when considering only those AGN with direct or single-epoch MBH estimates. This latter finding is in contrast to several previous studies which focused on z > 0.5 broad-line AGN. We discuss this tension and conclude that it can be partially accounted for if one adopts a simplified, power-law X-ray spectral model, combined with L/LEdd estimates that are based on the continuum emission and on single-epoch broad-line spectroscopy in the optical regime. We finally highlight the limitations on using Γx as a probe of supermassive black hole evolution in deep extragalactic X-ray surveys.

  2. Population Genetics of red striped mullet (Mullus surmuletus in Turkish Seas Based on Mitochondrial and Nuclear DNA data

    Directory of Open Access Journals (Sweden)

    Fevzi Bardakci

    2014-07-01

    This study was determined a preview of genetic structure of red striped mullet because of few sampling localities so a further study is would be useful to determine its population structure along its distribution area in detail.

  3. Columbia River Estuary Ecosystem Classification Hydrogeomorphic Reach

    Science.gov (United States)

    Cannon, Charles M.; Ramirez, Mary F.; Heatwole, Danelle W.; Burke, Jennifer L.; Simenstad, Charles A.; O'Connor, Jim E.; Marcoe, Keith

    2012-01-01

    Estuarine ecosystems are controlled by a variety of processes that operate at multiple spatial and temporal scales. Understanding the hierarchical nature of these processes will aid in prioritization of restoration efforts. This hierarchical Columbia River Estuary Ecosystem Classification (henceforth "Classification") of the Columbia River estuary is a spatial database of the tidally-influenced reaches of the lower Columbia River, the tidally affected parts of its tributaries, and the landforms that make up their floodplains for the 230 kilometers between the Pacific Ocean and Bonneville Dam. This work is a collaborative effort between University of Washington School of Aquatic and Fishery Sciences (henceforth "UW"), U.S. Geological Survey (henceforth "USGS"), and the Lower Columbia Estuary Partnership (henceforth "EP"). Consideration of geomorphologic processes will improve the understanding of controlling physical factors that drive ecosystem evolution along the tidal Columbia River. The Classification is organized around six hierarchical levels, progressing from the coarsest, regional scale to the finest, localized scale: (1) Ecosystem Province; (2) Ecoregion; (3) Hydrogeomorphic Reach; (4) Ecosystem Complex; (5) Geomorphic Catena; and (6) Primary Cover Class. For Levels 4 and 5, we mapped landforms within the Holocene floodplain primarily by visual interpretation of Light Detection and Ranging (LiDAR) topography supplemented with aerial photographs, Natural Resources Conservation Service (NRCS) soils data, and historical maps. Mapped landforms are classified as to their current geomorphic function, the inferred process regime that formed them, and anthropogenic modification. Channels were classified primarily by a set of depth-based rules and geometric relationships. Classification Level 5 floodplain landforms ("geomorphic catenae") were further classified based on multivariate analysis of land-cover within the mapped landform area and attributed as "sub

  4. Columbia River Estuary Ecosystem Classification Geomorphic Catena

    Science.gov (United States)

    Cannon, Charles M.; Ramirez, Mary F.; Heatwole, Danelle W.; Burke, Jennifer L.; Simenstad, Charles A.; O'Connor, Jim E.; Marcoe, Keith

    2012-01-01

    Estuarine ecosystems are controlled by a variety of processes that operate at multiple spatial and temporal scales. Understanding the hierarchical nature of these processes will aid in prioritization of restoration efforts. This hierarchical Columbia River Estuary Ecosystem Classification (henceforth "Classification") of the Columbia River estuary is a spatial database of the tidally-influenced reaches of the lower Columbia River, the tidally affected parts of its tributaries, and the landforms that make up their floodplains for the 230 kilometers between the Pacific Ocean and Bonneville Dam. This work is a collaborative effort between University of Washington School of Aquatic and Fishery Sciences (henceforth "UW"), U.S. Geological Survey (henceforth "USGS"), and the Lower Columbia Estuary Partnership (henceforth "EP"). Consideration of geomorphologic processes will improve the understanding of controlling physical factors that drive ecosystem evolution along the tidal Columbia River. The Classification is organized around six hierarchical levels, progressing from the coarsest, regional scale to the finest, localized scale: (1) Ecosystem Province; (2) Ecoregion; (3) Hydrogeomorphic Reach; (4) Ecosystem Complex; (5) Geomorphic Catena; and (6) Primary Cover Class. For Levels 4 and 5, we mapped landforms within the Holocene floodplain primarily by visual interpretation of Light Detection and Ranging (LiDAR) topography supplemented with aerial photographs, Natural Resources Conservation Service (NRCS) soils data, and historical maps. Mapped landforms are classified as to their current geomorphic function, the inferred process regime that formed them, and anthropogenic modification. Channels were classified primarily by a set of depth-based rules and geometric relationships. Classification Level 5 floodplain landforms ("geomorphic catenae") were further classified based on multivariate analysis of land-cover within the mapped landform area and attributed as "sub

  5. Columbia River Estuary Ecosystem Classification Ecosystem Complex

    Science.gov (United States)

    Cannon, Charles M.; Ramirez, Mary F.; Heatwole, Danelle W.; Burke, Jennifer L.; Simenstad, Charles A.; O'Connor, Jim E.; Marcoe, Keith Marcoe

    2012-01-01

    Estuarine ecosystems are controlled by a variety of processes that operate at multiple spatial and temporal scales. Understanding the hierarchical nature of these processes will aid in prioritization of restoration efforts. This hierarchical Columbia River Estuary Ecosystem Classification (henceforth "Classification") of the Columbia River estuary is a spatial database of the tidally-influenced reaches of the lower Columbia River, the tidally affected parts of its tributaries, and the landforms that make up their floodplains for the 230 kilometers between the Pacific Ocean and Bonneville Dam. This work is a collaborative effort between University of Washington School of Aquatic and Fishery Sciences (henceforth "UW"), U.S. Geological Survey (henceforth "USGS"), and the Lower Columbia Estuary Partnership (henceforth "EP"). Consideration of geomorphologic processes will improve the understanding of controlling physical factors that drive ecosystem evolution along the tidal Columbia River. The Classification is organized around six hierarchical levels, progressing from the coarsest, regional scale to the finest, localized scale: (1) Ecosystem Province; (2) Ecoregion; (3) Hydrogeomorphic Reach; (4) Ecosystem Complex; (5) Geomorphic Catena; and (6) Primary Cover Class. For Levels 4 and 5, we mapped landforms within the Holocene floodplain primarily by visual interpretation of Light Detection and Ranging (LiDAR) topography supplemented with aerial photographs, Natural Resources Conservation Service (NRCS) soils data, and historical maps. Mapped landforms are classified as to their current geomorphic function, the inferred process regime that formed them, and anthropogenic modification. Channels were classified primarily by a set of depth-based rules and geometric relationships. Classification Level 5 floodplain landforms ("geomorphic catenae") were further classified based on multivariate analysis of land-cover within the mapped landform area and attributed as "sub

  6. Cultura materiale e rituale funerario : la ceramica di forma aperta nella necropoli fenicia di Tiro – Al Bass (Libano)

    OpenAIRE

    Mura, Barbara

    2011-01-01

    Jornadas de Jóvenes en Investigación Arqueológica, JIA (3as : 5-7 de mayo 2010 : Universitat Autònoma de Barcelona). Sesión 5. Arqueología de la muerte. La necropoli fenicia di Al Bass (Tiro – Libano) è caratterizzata dall’omogeneità delle sepolture e dei corredi funerari ad esse associati. Secondo quanto appare nel registro archeologico, il gruppo umano che utilizza l’area funeraria di Al Bass è composto da una comunità di uguali: nessuna sepoltura, infatti, risalta particolarmente né per...

  7. Effects of herbal supplements on growth performance of sea bass (Dicentrarchus labrax: Change in body composition and some blood parameters

    Directory of Open Access Journals (Sweden)

    SEVDAN YILMAZ

    2012-01-01

    Full Text Available This study was conducted to investigate the effects of dietary thyme (Thymus vulgaris, rosemary (Rosmarinus officinalis and fenugreek (Trigonella foenum graecum as feed additives on growth performance, proximate composition and ammonia excretion of European sea bass Dicentrarchus labrax. Four isonitrogenous (48% crude protein and isocaloric (21 kj/g diets were formulated to contain 0% (control or 1% of thyme, rosemary or fenugreek. The thyme supplementation significantly increased protein efficiency ratio, fillet protein levels, protein and energy retentions (P0.05. The results indicate that dietary thyme improved the protein and energy retentions of sea bass.

  8. Pea protein concentrate as a substitute for fish meal protein in sea bass diet

    Directory of Open Access Journals (Sweden)

    E. Badini

    2010-01-01

    Full Text Available Pea seeds, even if lower in protein than oilseed meals, have been shown to successfully replace moderate amounts of fish meal protein in diets for carnivorous fish species (Kaushik et al., 1993, Gouveia and Davies, 2000. A further processing of such pulses provides concentrated protein products which look very promising as fish meal substitutes in aquafeeds (Thiessen et al., 2003. The aim of the present study was to evaluate nutrient digestibility, growth response, nutrient and energy retention efficiencies and whole body composition of sea bass (Dicentrarchus labrax, L. fed complete diets in which a pea protein concentrate (PPC was used to replace graded levels of fish meal protein.

  9. [Consequences of increasing and ageing population of Basse-Normandie on gynecology and obstetrics activity].

    Science.gov (United States)

    Mandon, M; Macé, J-M; Dreyfus, M; Berger, L

    2015-11-01

    In Basse-Normandie, the population over 65 years old will expend more rapidly between 2007 and 2042 (+11.6%) than the rest of the French population (+9.2%). The same population of Basse-Normandie will get old in the 15 years to come. The impact of these demographic changes over the activity in the gynecology-obstetrics field is not clearly identified. Although we cannot predict the technical and scientific developments in the next 15 years, we are presenting a model allowing to hypothesize about changes of gynecology and obstetrics according to population's aging. We have established a projection model for the realizable surgical acts in obstetrics and gynecology in accordance with the aging of the population in Basse-Normandie. The study was realized based on the acts concerning the cesarean sections (C-section), tubal sterilization, hysteroscopy and hysterectomy as well as ovarectomy and breast surgery. For each activity branch, the codes of the Classification commune des actes médicaux (CCAM) were selected and then removed from the Programme médicalisé des systèmes d'information (PMSI) database. We have used and adapted the Omphale model of the National Statistics and Economical Studies Institute and we have applied it for the period of 2009-2025. Our projection model has permeated to show a 5.5% regression of the C-section acts, a 2% incretion of the hysterectomies and hysteroscopies, 7.7% of ovarectomies as well as a 9.8% augmentation of the breast surgeries. However, we predict a 11.8% diminution of the sterilizations by tubal implants. Globally, the activity in obstetrics and gynecology will remain constant with an insignificant augmentation of 46 acts (0.01%). In Basse-Normandie, the surgical activity in gynecology-obstetrics will moderately increase in the next 15 years. This constant activity signifies that there is no need to form more residents than the number of practitioner to retire. The interest of this model is that it is applicable at a

  10. Cellular and molecular immune responses of the sea bass (Dicentrarchus labrax) experimentally infected with betanodavirus

    DEFF Research Database (Denmark)

    Scapigliati, G.; Buonocore, F.; Randelli, E.

    2010-01-01

    Naïve sea bass juveniles (38.4 ± 4.5 g) were intramuscularly infected with a sublethal dose of betanodavirus isolate 378/I03, followed after 43 days by a similar boosting. This infection resulted in an overall mortality of 7.6%. At various intervals, sampling of fish tissues was performed to inve...... was also observed, while the other tested genes did not show any significant variations with respect to mock-treated fish. Overall, our work represents a first comprehensive analysis of cellular and molecular immune parameters in a fish species exposed to a pathogenic virus....

  11. The status of fish conservation in South African estuaries.

    Science.gov (United States)

    Whitfield, A K; Cowley, P D

    2010-06-01

    Estuary-dependent fish species are defined as those taxa whose populations would be adversely affected by the loss of estuarine habitats. Of the 155 species regularly recorded in South African estuaries, only 32 (21%) are completely dependent on these systems, but this figure increases to 103 species (66%) if partially dependent taxa are included in the analysis. The conservation of fishes in estuaries on the subcontinent is threatened by a number of factors, including habitat degradation, disruption of essential ecological processes, hydrological manipulations, environmental pollution, overexploitation due to fishing activities and, more recently, climate change and the effects of introduced aquatic animals. Although major threats to fishes are usually linked to environmental degradation, there is increasing evidence that the stocks of certain fish species are overexploited or collapsed. Fish conservation and fisheries management does not depend on the implementation of a single action, but rather the co-ordination of a detailed plan, often in a multidisciplinary context. Some examples of innovative means of contributing to estuarine fish conservation in a South African context include the determination and implementation of the ecological freshwater requirements for estuaries, the zoning of estuaries for different uses and the recognition that the maintenance of ecological processes are vital to aquatic ecosystem health. Apart from the designation of protected areas, the main direct means of conserving fish species and stocks include habitat conservation, controls over fishing methods, effort, efficiency and seasonality, pollution control and the prevention of artificial manipulation of estuary mouths. Since becoming a democracy in 1994, environmental legislation, policy and institutional arrangements in South Africa have undergone some major changes, which, if fully implemented, will be very positive for fish conservation in estuaries on the subcontinent.

  12. Tidal circulation and energy dissipation in a shallow, sinuous estuary

    Science.gov (United States)

    Seim, Harvey; Blanton, Jackson; Elston, Susan

    2006-07-01

    The tidal dynamics in a pristine, mesotidal (>2 m range), marsh-dominated estuary are examined using moored and moving vessel field observations. Analysis focuses on the structure of the M 2 tide that accounts for approximately 80% of the observed tidal energy, and indicates a transition in character from a near standing wave on the continental shelf to a more progressive wave within the estuary. A slight maximum in water level (WL) occurs in the estuary 10-20 km from the mouth. M 2 WL amplitude decreases at 0.015 m/km landward of this point, implying head of tide approximately 75 km from the mouth. In contrast, tidal currents in the main channel 25 km inland are twice those at the estuary mouth. Analysis suggests the tidal character is consistent with a strongly convergent estuarine geometry controlling the tidal response in the estuary. First harmonic ( M 4) current amplitude follows the M 2 WL distribution, peaking at mid-estuary, whereas M 4 WL is greatest farther inland. The major axis current amplitude is strongly influenced by local bathymetry and topography. On most bends a momentum core shifts from the inside to outside of the bend moving seaward, similar to that seen in unidirectional river flow but with point bars shifted seaward of the bends. Dissipation rate estimates, based on changes in energy flux, are 0.18-1.65 W m-2 or 40-175 μW kg-1. A strong (0.1 m/s), depth-averaged residual flow is produced at the bends, which resembles flow around headlands, forming counter-rotating eddies that meet at the apex of the bends. A large sub-basin in the estuary exhibits remarkably different tidal characteristics and may be resonant at a harmonic of the M 2 tide.

  13. Photosynthetic characteristics of the phytoplankton in the Scheldt estuary: community and single-cell fluorescence measurements

    NARCIS (Netherlands)

    Dijkman, N.A.; Kromkamp, J.C.

    2006-01-01

    Estuaries present a very dynamic environment for phytoplankton with large changes in salinity occurring over relatively short distances, usually with high turbidity. We investigated the photosynthetic characteristics of phytoplankton in the Scheldt estuary (Belgium and the Netherlands) along a

  14. Picophytoplankton community in a tropical estuary: Detection of Prochlorococcus-like populations

    Digital Repository Service at National Institute of Oceanography (India)

    Mitbavkar, S.; Rajaneesh, K.M.; Anil, A.C.; Sundar, D.

    The influence of hydrography on the picophytoplankton (PP) abundance in estuaries was studied by sampling along a salinity gradient in an Indian estuary. Prochlorococcus-like cells were detected at salinities ranging from 0.06 to 35, which otherwise...

  15. Suspended sediment fluxes in a tropical estuary, west coast of India

    Digital Repository Service at National Institute of Oceanography (India)

    AnilKumar, N.; DineshKumar, P.K.; Srinivas, K.

    Annual transport processes of suspended sediments in Beypore estuary - a tropical estuary along the south west coast of India - were investigated based on time series measurements within the system. It's observed that the sediment transport...

  16. Impact of maintenance dredging on macrobenthic community structure of a tropical estuary

    Digital Repository Service at National Institute of Oceanography (India)

    Rehitha, T.V.; Ullas, N; Vineetha, G.; Benny, P.Y; Madhu, N; Revichandran, C.

    This paper demonstrates the impact of maintenance dredging activities on the macrobenthic community structure of a tropical monsoonal estuary (Cochin estuary), located in the southwest coast of India for three consecutive years. The results...

  17. A foraminiferal testimony for the reduced adverse effects of mining in Zuari Estuary, Goa

    Digital Repository Service at National Institute of Oceanography (India)

    Panchang, R.; Nigam, R.; Baig, N.; Nayak, G.N.

    with the TSM data collected over the years, which has considerably decreased. The foraminiferal data, TSM data and reduction in mining activities in the catchment area of the Zuari Estuary suggest an improvement in the environmental health of the estuary...

  18. A comparative study of Northern Ireland's estuaries based on the results of beam trawl fish surveys

    Science.gov (United States)

    Harrison, Trevor D.; Armour, Neil D.; McNeill, Michael T.; Moorehead, Peter W.

    2017-11-01

    The fish communities of Northern Ireland's estuaries were described and compared using data collected with a modified beam trawl over a six year period from 2009 to 2014. Multivariate analyses identified four estuary groups based on variations in their physico-chemical attributes. These groups broadly corresponded with the distribution and variation of estuary geomorphic types identified around the Irish coast. The dominant fish species captured were also among the main species reported in other North East Atlantic estuaries. A significant link between the estuary types and their fish communities was found; each estuary group contained a somewhat distinctive fish community. The fish communities also showed a significant relationship with the physico-chemical characteristics of the estuaries. Differences in fish species composition are attributed to habitat and environmental preferences of key estuary-associated species.

  19. Maturation of the penaeid prawn Metapenaeus moyebi in Mandovi Estuary, Goa

    Digital Repository Service at National Institute of Oceanography (India)

    Nair, S.R.S.; Achuthankutty, C.T.; Parulekar, A.H.

    Metapenaeus moyebi contributed a good share of penaeid prawn population in the Mandovi Estuary of Goa, India throughout the year. Both males and females of this species with fully mature gonads were observed in the estuary, suggesting further...

  20. Effect of nutrient pollution on dinoflagellate cyst assemblages across estuaries of the NW Atlantic

    Science.gov (United States)

    We analyzed surface sediments from 23 northeast USA estuaries, from Maine to Delaware, and nine estuaries from Prince Edward Island (PEI, Canada), to determine how dinoflagellate cyst assemblages varied with nutrient loading. Overall the abundance of cysts of heterotrophic dinofl...

  1. The physics of stripe patterns in turbulent channel flow determined by DNS results

    CERN Document Server

    Kiš, P; Herwig, H

    2015-01-01

    The turbulent flow in an infinitely extended plane channel is analysed by solving the Navier-Stokes equations with a DNS approach. Solutions are obtained in a numerical solution domain of finite size in the streamwise as well as in the lateral direction setting periodic boundary conditions in both directions. Their impact on large scale structures in the turbulent flow field is analysed carefully in order to avoid their suppression. When this is done appropriately well known stripe patterns in these flows can be observed and analysed especially with respect to their relative motion compared to the mean flow velocity. Various details of this stripe pattern dominated velocity field are shown. Also global parameters like the friction factor in the flow field and the Nusselt number in the temperature field are determined based on the statistics of the flow and temperature data in a very large time period that guarantees fully developed turbulent flow and heat transfer.

  2. Pigment cell interactions and differential xanthophore recruitment underlying zebrafish stripe reiteration and Danio pattern evolution.

    Science.gov (United States)

    Patterson, Larissa B; Bain, Emily J; Parichy, David M

    2014-11-06

    Fishes have diverse pigment patterns, yet mechanisms of pattern evolution remain poorly understood. In zebrafish, Danio rerio, pigment-cell autonomous interactions generate dark stripes of melanophores that alternate with light interstripes of xanthophores and iridophores. Here, we identify mechanisms underlying the evolution of a uniform pattern in D. albolineatus in which all three pigment cell classes are intermingled. We show that in this species xanthophores differentiate precociously over a wider area, and that cis regulatory evolution has increased expression of xanthogenic Colony Stimulating Factor-1 (Csf1). Expressing Csf1 similarly in D. rerio has cascading effects, driving the intermingling of all three pigment cell classes and resulting in the loss of stripes, as in D. albolineatus. Our results identify novel mechanisms of pattern development and illustrate how pattern diversity can be generated when a core network of pigment-cell autonomous interactions is coupled with changes in pigment cell differentiation.

  3. Angular dependent ferromagnetic resonance analysis in a single micron sized cobalt stripe

    Science.gov (United States)

    Schoeppner, C.; Wagner, K.; Stienen, S.; Meckenstock, R.; Farle, M.; Narkowicz, R.; Suter, D.; Lindner, J.

    2014-07-01

    We demonstrate how planar microresonators (PMRs) can be utilized to investigate the angular dependent magnetic resonance response of single magnetic nanostructures. In contrast to alternative detection schemes like electrical or optical detection, the PMR approach provides a classical means of investigating the high frequency dynamics of single magnetic entities, enabling the use of well-established analysis methods of ferromagnetic resonance (FMR) spectroscopy. To demonstrate the performance of the PMR-based FMR setup for angular dependent measurements, we investigate the microwave excited magnons in a single Co stripe of 5 × 1 × 0.02 μm3 and compare the results to micromagnetic simulations. The evolution of excited magnons under rotation of one individual stripe with respect to a static magnetic field is investigated. Besides quasi uniform excitations, we observe magneto-static as well as localized excitations. We find a strong influence of inhomogeneous dynamic and static demagnetizing fields for all modes.

  4. Effect of an electric field on the properties of BN Möbius stripes

    Energy Technology Data Exchange (ETDEWEB)

    Lemos de Melo, J. [Departamento de Física, CCEN, Universidade Federal da Paraíba, Caixa Postal 5008, 58051-900 João Pessoa, PB (Brazil); Azevedo, S., E-mail: sazevedo@fisica.ufpb.br [Departamento de Física, CCEN, Universidade Federal da Paraíba, Caixa Postal 5008, 58051-900 João Pessoa, PB (Brazil); Kaschny, J.R. [Instituto Federal da Bahia, Campus Vitória da Conquista, Av. Amazonas 3150, 45075-265 Vitória da conquista, BA (Brazil)

    2014-09-15

    In the present work, we present a first-principles study on the effects of an external electric field on the structural stability and electronic properties of boron nitride Möbius stripes with armchair and zigzag chirality. The calculation results indicate that the gap energy can be remarkably reduced by the application of an external field. Such reduction is in principle attributed to the occurrence of Stark effect, which significance depends on the orientation of the applied field relative to the stripe axis. Moreover, the electric field produces significant changes on dipole momentum of the structure and induces a negative shift on the calculated total energy, reducing the obtained formation energy. - Highlights: • The gap energy is remarkably reduced by the application of an external field. • The electric field produces significant changes on dipole momentum. • The field induces a negative shift on the total energy due to Stark effect.

  5. Stripe order in the underdoped region of the two-dimensional Hubbard model

    Science.gov (United States)

    Zheng, Bo-Xiao; Chung, Chia-Min; Corboz, Philippe; Ehlers, Georg; Qin, Ming-Pu; Noack, Reinhard M.; Shi, Hao; White, Steven R.; Zhang, Shiwei; Chan, Garnet Kin-Lic

    2017-12-01

    Competing inhomogeneous orders are a central feature of correlated electron materials, including the high-temperature superconductors. The two-dimensional Hubbard model serves as the canonical microscopic physical model for such systems. Multiple orders have been proposed in the underdoped part of the phase diagram, which corresponds to a regime of maximum numerical difficulty. By combining the latest numerical methods in exhaustive simulations, we uncover the ordering in the underdoped ground state. We find a stripe order that has a highly compressible wavelength on an energy scale of a few kelvin, with wavelength fluctuations coupled to pairing order. The favored filled stripe order is different from that seen in real materials. Our results demonstrate the power of modern numerical methods to solve microscopic models, even in challenging settings.

  6. Effect of the tiger stripes on the deformation of Saturn's moon Enceladus

    Science.gov (United States)

    Souček, Ondřej; Hron, Jaroslav; Běhounková, Marie; Čadek, Ondřej

    2016-07-01

    Enceladus is a small icy moon of Saturn with active jets of water emanating from fractures around the south pole, informally called tiger stripes, which might be connected to a subsurface water ocean. The effect of these features on periodic tidal deformation of the moon has so far been neglected because of the difficulties associated with implementation of faults in continuum mechanics models. Here we estimate the maximum possible impact of the tiger stripes on tidal deformation and heat production within Enceladus's ice shell by representing them as narrow zones with negligible frictional and bulk resistance passing vertically through the whole ice shell. Assuming a uniform ice shell thickness of 25 km, consistent with the recent estimate of libration, we demonstrate that the faults can dramatically change the distribution of stress and strain in Enceladus's south polar region, leading to a significant increase of the heat production in this area.

  7. The external and middle ear of the striped dolphin Stenella coeruleoalba (Meyen 1833).

    Science.gov (United States)

    Sassu, R; Cozzi, B

    2007-06-01

    The ear of cetaceans, and especially the middle ear, is very different from that of terrestrial mammals and shows specific adaptations to diving. Our research, performed on six Striped dolphins (Stenella coeruleoalba) stranded along the Italian coasts of the Mediterranean Sea, concentrated on the morphology of the external and middle ear of this species. We report the findings using a proper Veterinary Anatomical Nomenclature and describe the characteristics of the auditory meatus of the external ear and the presence and morphology of the erectile tissue in the middle ear. Our anatomical and histological data highlight the structure and possible functions of the corpus cavernosum located in the middle ear of the Striped dolphin, and suggest a possible role for this structure in relation to pressure regulation during diving. Many of our observations indicate the existence of an internal regulatory system able to prevent barotraumas by regulating pressure and volume inside the middle ear cavity.

  8. Systemic herpesvirus and morbillivirus co-infection in a striped dolphin (Stenella coeruleoalba).

    Science.gov (United States)

    Soto, S; González, B; Willoughby, K; Maley, M; Olvera, A; Kennedy, S; Marco, A; Domingo, M

    2012-01-01

    During 2007 a dolphin morbillivirus epizootic affected the western Mediterranean and several striped dolphins (Stenella coeruleoalba) stranded on the Catalonian coasts. One of those animals had severe lymphoid depletion, necrosis and syncytial formation in lymph nodes and spleen, with large basophilic nuclear inclusions compatible with herpesvirus detected by immunohistochemical and ultrastructural examination. Non-suppurative encephalitis with associated morbillivirus antigen and morbillivirus antigen within alveolar macrophages were also observed. A pan-herpesvirus nested polymerase chain reaction amplified a sequence virtually identical to two cetacean herpesvirus sequences previously identified in systemic infections in an Atlantic Cuvier's beaked whale (Ziphius cavirostris) and in a Mediterranean striped dolphin. The herpesviral infection was probably secondary to the immunosuppression caused by the morbillivirus. To our knowledge, this is the first report of a cetacean co-infected by dolphin morbillivirus and herpesvirus with evidence of lesions attributable to both viruses. Copyright © 2011 Elsevier Ltd. All rights reserved.

  9. Linearly enhanced response of thermopower in cascaded array of dual-stripe single-metal thermocouples

    Science.gov (United States)

    Li, Gang; Han, Danhong; Yang, Fan; Wang, Zhenhai; Pi, Yudan; Wang, Wei; Xu, Shengyong

    2017-05-01

    Based on the width dependence of thermopower, cascaded single-metal thermocouples were demonstrated in this report. The cascaded thermocouples were made from 100 nm thick Ni films with a 100 μm wide stripe and a 5 μm narrow stripe. The experiment results showed a linearly enhanced response of thermopower. The 64-cascaded thermocouple achieved an equivalent Seebeck coefficient of up to 55.69 μV/K, which is higher than that of a commercial type-K thermocouple (39.6 μV/K). The single-metal thermocouples were also fabricated on flexible substrates. With the simple fabrication process and remarkable temperature sensing ability, the cascaded single-metal thermocouples may find promising applications in temperature measurement of modern flexible electronic products and wearable devices.

  10. Serially homologous engrailed stripes are generated via different cell lineages in the germ band of amphipod crustaceans (Malacostraca, Peracarida).

    Science.gov (United States)

    Scholtz, G; Patel, N H; Dohle, W

    1994-09-01

    A monoclonal antibody (mAb 4D9) was used to analyze engrailed expression in amphipod embryos. As in other arthropods, engrailed is expressed in iterated transverse stripes in the germ band. In the anterior region these stripes are generated without a recognizable division pattern, and their appearance and formation show some irregularities. In the posterior region of the germ band, engrailed expression is correlated with a stereotyped cell division pattern resulting in a highly ordered formation and array of stripes. The engrailed positive cells mark the anterior border of genealogical units, which therefore can be compared with parasegments in Drosophila. Expression starts in the mandibular segment and proceeds first anteriorly and subsequently in a posterior direction. Initial stripes are one cell wide. The widening of stripes is caused by both division of engrailed positive cells and recruitment of new cells that did not previously express engrailed. The widening process is related to segment formation as the intersegmental furrows are established behind the engrailed expressing cells, which are restricted to the posterior portion of the forming segments. A comparison of the modes of engrailed expression in different segments suggests that initial engrailed expression is independent of a certain cell lineage or division pattern. The comparison of the development of the early engrailed stripes in different insects and crustaceans reveals some similarities which show that early engrailed expression is not necessarily clonally inherited.

  11. A study of chiral magnetic stripe domains within an in-plane virtual magnetic field using SPLEEM

    Science.gov (United States)

    Li, Qian; Yang, Mengmeng; Chen, Gong; Schmid, Andreas; Dong, Qiaoyan; Wu, Yizheng; Hwang, Chanyong; Li, Jia; Qiu, Ziqiang

    Stripe domains form in magnetic thin films at the spin reorientation transition. Different from the typical Bloch type domain walls (DW), it was found recently that Dzyaloshinskii-Moriya interaction (DMI) could lead to chiral Néel type DMs in the stripe domain phase. While the application of an out-of-plane magnetic field is known to break the stripes into skyrmions, it is unclear how the chiral stripe phase would respond to an in-plane magnetic field? Here we report an experimental study on Fe/Ni/Cu/Co/Cu(001) system using spin-polarized low-energy electron microscopy (SPLEEM). In this system, the Fe/Ni layer exhibits stripe domains with chiral Néel type DMs and its interlayer coupling to Co across the Cu spacer layer serves as an in-plane virtual magnetic field whose strength can be tuned by changing the Cu spacer layer thickness. We find the in-plane field aligns the stripes parallel to the field direction. Increasing the in-plane field strength gradually changes the Néel type DWs into Bloch type DWs. However, it is surprising the adjacent Néel DWs behave asymmetrically in-response to the in-plane magnetic field, suggesting a topological effect in switching the chiral Néel DWs to the non-chiral Bloch DWs.

  12. Engineering 1D Quantum Stripes from Superlattices of 2D Layered Materials

    Energy Technology Data Exchange (ETDEWEB)

    Gruenewald, John H.; Kim, Jungho; Kim, Heung Sik; Johnson, Jared M.; Hwang, Jinwoo; Souri, Maryam; Terzic, Jasminka; Chang, Seo Hyoung; Said, Ayman; Brill, Joseph W.; Cao, Gang; Kee, Hae-young; Seo, Sung S. Ambrose

    2017-01-04

    Dimensional tunability from two dimensions to one dimension is demonstrated for the first time using an artificial superlattice method in synthesizing 1D stripes from 2D layered materials. The 1D confinement of layered Sr2IrO4 induces distinct 1D quantum-confined electronic states, as observed from optical spectroscopy and resonant inelastic X-ray scattering. This 1D superlattice approach is generalizable to a wide range of layered materials.

  13. Mapping genes for resistance to stripe rust in spring wheat landrace PI 480035.

    Directory of Open Access Journals (Sweden)

    Jinita Sthapit Kandel

    Full Text Available Stripe rust caused by Puccinia striiformis Westend. f. sp. tritici Erikks. is an economically important disease of wheat (Triticum aestivum L.. Hexaploid spring wheat landrace PI 480035 was highly resistant to stripe rust in the field in Washington during 2011 and 2012. The objective of this research was to identify quantitative trait loci (QTL for stripe rust resistance in PI 480035. A spring wheat, "Avocet Susceptible" (AvS, was crossed with PI 480035 to develop a biparental population of 110 recombinant inbred lines (RIL. The population was evaluated in the field in 2013 and 2014 and seedling reactions were examined against three races (PSTv-14, PSTv-37, and PSTv-40 of the pathogen under controlled conditions. The population was genotyped with genotyping-by-sequencing and microsatellite markers across the whole wheat genome. A major QTL, QYr.wrsggl1-1BS was identified on chromosome 1B. The closest flanking markers were Xgwm273, Xgwm11, and Xbarc187 1.01 cM distal to QYr.wrsggl1-1BS, Xcfd59 0.59 cM proximal and XA365 3.19 cM proximal to QYr.wrsggl1-1BS. Another QTL, QYr.wrsggl1-3B, was identified on 3B, which was significant only for PSTv-40 and was not significant in the field, indicating it confers a race-specific resistance. Comparison with markers associated with previously reported Yr genes on 1B (Yr64, Yr65, and YrH52 indicated that QYr.wrsggl1-1BS is potentially a novel stripe rust resistance gene that can be incorporated into modern breeding materials, along with other all-stage and adult-plant resistance genes to develop cultivars that can provide durable resistance.

  14. Sustained eruptions on Enceladus explained by turbulent dissipation in tiger stripes

    Science.gov (United States)

    Kite, Edwin S.; Rubin, Allan M.

    2016-04-01

    Spacecraft observations suggest that the plumes of Saturn’s moon Enceladus draw water from a subsurface ocean, but the sustainability of conduits linking ocean and surface is not understood. Observations show eruptions from “tiger stripe” fissures that are sustained (although tidally modulated) throughout each orbit, and since the 2005 discovery of the plumes. Peak plume flux lags peak tidal extension by ˜1 rad, suggestive of resonance. Here, we show that a model of the tiger stripes as tidally flexed slots that puncture the ice shell can simultaneously explain the persistence of the eruptions through the tidal cycle, the phase lag, and the total power output of the tiger stripe terrain, while suggesting that eruptions are maintained over geological timescales. The delay associated with flushing and refilling of O(1)-m-wide slots with ocean water causes erupted flux to lag tidal forcing and helps to buttress slots against closure, while tidally pumped in-slot flow leads to heating and mechanical disruption that staves off slot freezeout. Much narrower and much wider slots cannot be sustained. In the presence of long-lived slots, the 106-y average power output of the tiger stripes is buffered by a feedback between ice melt-back and subsidence to O(1010) W, which is similar to observed power output, suggesting long-term stability. Turbulent dissipation makes testable predictions for the final flybys of Enceladus by Cassini. Our model shows how open connections to an ocean can be reconciled with, and sustain, long-lived eruptions. Turbulent dissipation in long-lived slots helps maintain the ocean against freezing, maintains access by future Enceladus missions to ocean materials, and is plausibly the major energy source for tiger stripe activity.

  15. Neuronal and astrocytic involvement in striped dolphins (Stenella coeruleoalba) with morbilliviral encephalitis.

    Science.gov (United States)

    Lucá, R; Giacominelli-Stuffler, R; Mazzariol, S; Roperto, S; Cocumelli, C; DI Guardo, G

    2017-01-01

    Dolphin morbillivirus (DMV), a highly pathogenic agent, may cause peculiar, "brain-only" forms of infection (BOFDI), in which viral antigen and/or genome is found exclusively in the brain from striped dolphins (Stenella coeruleoalba). These BOFDIs show morphopathological similarities with subacute sclerosing panencephalitis and old dog encephalitis (ODE) in measles virus-infected patients and in canine distemper virus-infected dogs, respectively. The brain tissue from 3 BOFDI-affected striped dolphins was investigated by means of double labelling-indirect immunofluorescence (DL-IIF) and ultrastructurally, in order to characterize the DMV-targeted neuronal and non-neuronal cell populations, along with the associated submicroscopic findings. Viral colonization of calbindin-immunoreactive (IR) and nitric oxide synthase-IR neurons was detected in the cerebral parenchyma from the 3 DMV-infected dolphins under study, associated with nuclear (chromatin) and cytoplasmic (mitochondrial) ultrastructural changes. Furthermore, a limited viral targeting of brain astrocytes was found in these animals, all of which exhibited a prominent astrogliosis/astrocytosis. To the best of our knowledge, those herein reported should be the first submicroscopic pathology and neuropathogenetic data about BOFDI in striped dolphins. In this respect, the marked astrogliosis/astrocytosis and the low viral colonization of brain astrocytes in the 3 DMV-infected dolphins under investigation are of interest from the comparative pathology and viral neuropathogenesis standpoints, when compared with ODE-affected dogs, in whose brain a non-cytolytic, astrocyte-to-astrocyte infectious spread has been recently documented. Further studies aimed at characterizing the complex DMV-host interactions in BOFDI-affected striped dolphins are needed.

  16. A histological and NMR study of the melon of the striped dolphin (Stenella coeruleoalba).

    Science.gov (United States)

    Scano, P; Maxia, C; Maggiani, F; Crnjar, R; Lai, A; Sirigu, P

    2005-03-01

    The melon, the echolocation organ of the striped dolphin (Stenella coeruleoalba), was investigated by morphological and high-resolution (13)C nuclear magnetic resonance (NMR) methods, in order to characterize structure and composition gradient at the histological and molecular level. Morphological analysis showed that the lipidic components are organized in an adipose tissue; moreover, a clear muscular component was observed. Age-related structural differences also were noted. Furthermore, NMR yielded detailed information at a qualitative-quantitative level on the lipid components.

  17. Experimental and numerical analysis of thermal striping in automotive brake discs

    OpenAIRE

    Augustins, L; Hild, Francois; Billardon, R; Boudevin, S

    2017-01-01

    International audience; In the present study, thermal striping development on friction bands of brake discs is investigated through an experimental and numerical analysis. A test consisting of a series of several hundred severe brakings was carried out on a specific bench at PSA Peugeot Citroën. The experimental observations of the crack network evolution and a numerical analysis of a brake disc with a single crack helped to propose a macroscopic criterion capable of predicting the criticalit...

  18. Model simulation of tide-induced currents in Gauthami-Godavari estuary

    Digital Repository Service at National Institute of Oceanography (India)

    Sridevi, B.; Murty, T.V.R.; Sadhuram, Y.; Sarma, V.V.S.S.; Naidu, V.S.; Prasad, K.V.S.R.

    –Godavari estuary Estuaries are often surrounded by pro- tected ecosystems, and harbour signifi- cant human populations which exploit the area for leisure and tourism. Studies on Indian estuaries can be found in Qasim1. Several studies2–11 reported various... controlled by Low Dam at Dowleiswaram, where it bifurcates into two channels as Vasishta and Gauthami Godavari estuary (Figure 1)18,19. Discharge was maximal in August, and virtually no or negligible discharge between January and May19. Mixing...

  19. Sediment balance of intertidal mudflats in a macrotidal estuary

    Science.gov (United States)

    lafite, R.; Deloffre, J.; Lemoine, M.

    2012-12-01

    Intertidal area contributes widely to fine-grained sediment balance in estuarine environments. Their sedimentary dynamics is controlled by several forcing parameters including tidal range, river flow and swell, affected by human activities such as dredging, construction or vessels traffic leading to modify sediment transport pattern. Although the estuarine hydrodynamics is well documented, the link between forcing parameters and these sedimentary processes is weakly understood. One of the main reasons is the difficulty to integrate spatial (from the fluvial to the estuary mouth) and temporal (from swell in seconds to pluriannual river flow variability) patterns. This study achieved on intertidal mudflats distributed along the macrotidal Seine estuary (France) aims (i) to quantify the impact of forcing parameters on each intertidal area respect to its longitudinal position in the estuarine system and (ii) to assess the fine-grained sediment budget at estuarine scale. The Seine estuary is a macrotidal estuary developed over 160 km up the upstream limit of tidal wave penetration. With an average river flow of 450m3.s-1, 80% of the Suspended Particles Matter (SPM) annual flux is discharged during the flood period. In the downstream part, the Seine estuary Turbidity Maximum (TM) is the SPM stock located near the mouth. During their transfer toward the sea, the fine particles can be trapped in (i) the intertidal mudflats; preferential areas characterized by low hydrodynamics and generally sheltered of the tidal dominant flow, the main tidal current the Seine River and (ii) the TM. The Seine estuary is an anthropic estuary in order to secure navigation: one consequence of these developments is the tidal bore disappearance. Along the macrotidal Seine estuary hydrodynamics features and sedimentary fluxes were followed during at least 1 year using respectively Acoustic Doppler Velocimeter, Optical BackScatter and altimeter. Results in the fluvial estuary enhance the role of

  20. Dynamics of intertidal flats in the Loire estuary

    Science.gov (United States)

    Kervella, Stephane; Sottolichio, Aldo; Bertier, Christine

    2014-05-01

    Tidal flats form at the edges of many tidal estuaries, and are found in broad climatic regions. Their evolution plays a fundamental role in maintaining the morphodynamic equilibrium of an estuary. The Loire estuary is one of the largest macrotidal systems of the french atlantic coast. Since 200 years, its geometry has been drastically modified through channeling, deepening, embanking, infilling of secondary channels, etc. These works altered many intertidal areas. In the recent years, efforts for the rectification of the morphology have been made in order to restore the ecology of the estuary. In this context, it is crucial to better understand the dynamics of intertidal flats, still poorly understood in this estuary. The aim of this work is to analyse a series of original observations conducted for the first time in two intertidal flats of the central Lore estuary between 2008 and 2010. The tidal flats are situated in the northern bank, at 12 and 17 km upstream from the mouth respectively. Six Altus altimeters were deployed at two cross shore transects, measuring continuously and at a high-frequency bed altimetry and water level, providing information on tide and waves. At the semi-diurnal tidal scale, the surficial sediment of intertidal flats is permanently mobilized. Altimetry variations are low, and their amplitude varies as a function of tides and river flow. At the scale of several months, the sedimentation is controlled by the position of the turbidity maximum (and therefore by the river flow) and also by the tidal amplitude. During low river flow periods, altimetry variations are only due to tidal cycles. During decaying tides, suspended sediment settle mainly on the lower part of the tidal flats, forming fluid mud layers of several cm thick, which can consolidate rapidly; under rising tides, the increasing of tidal currents promotes erosion. During periods of high river flow, the turbidity maximum shifts to the lower estuary. The higher suspended sediment

  1. Polarization of high-energy emission in a pulsar striped wind

    Science.gov (United States)

    Pétri, Jérôme; Kirk, John

    2008-02-01

    Recent observations of the polarization of the optical pulses from the Crab pulsar motivated detailed comparative studies of the emission predicted by the polar cap, the outer gap and the two-pole caustics models. In this work, we study the polarization properties of the synchrotron emission emanating from the striped wind model. We use an explicit asymptotic solution for the large-scale field structure related to the oblique split monopole and valid for the case of an ultra-relativistic plasma. This is combined with a crude model for the emissivity of the striped wind and of the magnetic field within the dissipating stripes themselves. We calculate the polarization properties of the high-energy pulsed emission and compare our results with optical observations of the Crab pulsar. The resulting radiation is linearly polarized. In the off-pulse region, the electric vector lies in the direction of the projection on the sky of the rotation axis of the pulsar, in good agreement with the data. Other properties such as a reduced degree of polarization and a characteristic sweep of the polarization angle within the pulses are also reproduced.

  2. Polarisation Of High-Energy Emission In A Pulsar Striped Wind

    Science.gov (United States)

    Petri, J. A.; Kirk, J. G.

    2006-08-01

    Recent observations of the polarisation of the optical pulses from the Crab pulsar (Kanbach et al. 2005, AIP Proceedings, astro-ph/0511636) motivated detailed comparative studies of the emission predicted by the polar cap, the outer gap and the two-pole caustics models. In this work, we study the polarisation properties of the synchrotron emission emanating from the striped wind model. We use an explicit asymptotic solution for the large-scale field structure related to the oblique split monopole and valid for the case of an ultrarelativistic plasma (Bogovalov, A&A, 1999, 349, 1017). This is combined with a crude model for the emissivity of the striped wind and of the magnetic field within the dissipating stripes themselves. We calculate the polarisation properties of the high-energy pulsed emission and compare our results with optical observations of the Crab pulsar. The resulting radiation is linearly polarized. In the off-pulse region, the electric vector lies in the direction of the projection on the sky of the rotation axis of the pulsar, in good agreement with the data. Other properties such as a reduced degree of polarisation and a characteristic sweep of the polarisation angle within the pulses are also reproduced (Petri & Kirk, ApJ Letters, 2005, 627, L37).

  3. Reduction of Uncorrelated Striping Noise—Applications for Hyperspectral Pushbroom Acquisitions

    Directory of Open Access Journals (Sweden)

    Christian Rogass

    2014-11-01

    Full Text Available Hyperspectral images are of increasing importance in remote sensing applications. Imaging spectrometers provide semi-continuous spectra that can be used for physics based surface cover material identification and quantification. Preceding radiometric calibrations serve as a basis for the transformation of measured signals into physics based units such as radiance. Pushbroom sensors collect incident radiation by at least one detector array utilizing the photoelectric effect. Temporal variations of the detector characteristics that differ with foregoing radiometric calibration cause visually perceptible along-track stripes in the at-sensor radiance data that aggravate succeeding image-based analyses. Especially, variations of the thermally induced dark current dominate and have to be reduced. In this work, a new approach is presented that efficiently reduces dark current related stripe noise. It integrates an across-effect gradient minimization principle. The performance has been evaluated using artificially degraded whiskbroom (reference and real pushbroom acquisitions from EO-1 Hyperion and AISA DUAL that are significantly covered by stripe noise. A set of quality indicators has been used for the accuracy assessment. They clearly show that the new approach outperforms a limited set of tested state-of-the-art approaches and achieves a very high accuracy related to ground-truth for selected tests. It may substitute recent algorithms in the Reduction of Miscalibration Effects (ROME framework that is broadly used to reduce radiometric miscalibrations of pushbroom data takes.

  4. Characterization of cysteine protease-like genes in the striped rice stem borer, Chilo suppressalis.

    Science.gov (United States)

    Ge, Zhao-Yu; Wan, Pin-Jun; Li, Guo-Qing; Xia, Yong-Gui; Han, Zhao-Jun

    2014-02-01

    The striped rice stem borer, Chilo suppressalis (Walker), is a major pest for rice production in China and the rest of Southeast Asia. Chemical control is the main means to alleviate losses due to this pest, which causes serious environmental pollution. An effective and environmentally friendly approach is needed for the management of the striped rice stem borer. Cysteine proteases in insects could be useful targets for pest management either through engineering plant protease inhibitors, targeting insect digestive cysteine proteases, or through RNA interference-based silencing of cysteine proteases, disrupting developmental regulation of insects. In this study, eight cysteine protease-like genes were identified and partially characterized. The genes CCO2 and CCL4 were exclusively expressed in the larval gut, and their expression was affected by the state of nutrition in the insect. The expression of CCL2, CCL3, and CCO1 was significantly affected by the type of host plant, suggesting a role in host plant - insect interactions. Our initial characterization of the striped rice stem borer cysteine protease-like genes provides a foundation for further research on this important group of genes in this major insect pest of rice.

  5. The microbiome of a striped dolphin (Stenella coeruleoalba) stranded in Portugal.

    Science.gov (United States)

    Godoy-Vitorino, Filipa; Rodriguez-Hilario, Arnold; Alves, Ana Luísa; Gonçalves, Filipa; Cabrera-Colon, Beatriz; Mesquita, Cristina Sousa; Soares-Castro, Pedro; Ferreira, Marisa; Marçalo, Ana; Vingada, José; Eira, Catarina; Santos, Pedro Miguel

    2017-01-01

    Infectious diseases with epizootic consequences have not been fully studied in marine mammals. Presently, the unprecedented depth of sequencing, made available by high-throughput approaches, allows detailed comparisons of the microbiome in health and disease. This is the first report of the striped dolphin microbiome in different body sites. Samples from one striped female edematous dolphin were acquired from a variety of body niches, including the blowhole, oral cavity, oral mucosa, tongue, stomach, intestines and genital mucosa. Detailed 16S rRNA analysis of over half a million sequences identified 235 OTUs. Beta diversity analyses indicated that microbial communities vary in structure and cluster by sample origin. Pathogenic, Gram-negative, facultative and obligate anaerobic taxa were significantly detected, including Cetobacterium, Fusobacterium and Ureaplasma. Phocoenobacter and Arcobacter dominated the oral-type samples, while Cardiobacteriaceae and Vibrio were associated with the blowhole and Photobacterium were abundant in the gut. We report for the first time the association of Epulopiscium with a marine mammal gut. The striped dolphin microbiota shows variation in structure and diversity according to the organ type. The high dominance of Gram-negative anaerobic pathogens evidences a cetacean microbiome affected by human-related bacteria. Copyright © 2016 Institut Pasteur. Published by Elsevier Masson SAS. All rights reserved.

  6. Dissolved organic carbon in the freshwater tidal reaches of the Schelde estuary

    DEFF Research Database (Denmark)

    Muylaert, K.; Dasseville, R.; De Brabandere, Loreto

    2005-01-01

    between DOC and discharge. Most DOC originating from waste water being discharged in tributaries of the estuary appears to be remineralised before these tributaries reach the main estuary. Although dense phytoplankton blooms were observed in the upper estuary during summer (up to 700 mg chl a...

  7. Use of a small, intermittently-open estuary by waterbirds: a case ...

    African Journals Online (AJOL)

    open estuaries to waterbirds. Waterbird activities were monitored in a section of the East Kleinemonde Estuary on the south-east coast of South Africa from June 2004 to May 2005. Counts along the whole estuary were conducted approximately ...

  8. Distribution and sources of particulate organic matter in the Indian monsoonal estuaries during monsoon

    Digital Repository Service at National Institute of Oceanography (India)

    Sarma, V.V.S.S.; Krishna, M.S.; Prasad, V.R.; Kumar, B.S.K.; Naidu, S.A.; Rao, G.D.; Viswanadham, R.; Sridevi, T.; Kumar, P.P.; Reddy, N.P.C.

    in estuaries with deeper photic zone than other estuaries receiving higher suspended matter. The delta13CPOC and delta15CPN data suggest that relatively higher delta13CPOC (-27.9 to -22.6‰) and lower delta15CPN (0.7 to 5.8‰) were noticed in the estuaries...

  9. A survey of the fISh fauna of Transkei estuaries. Part 1. The Kei ...

    African Journals Online (AJOL)

    1985-01-16

    Jan 16, 1985 ... abundance of fish caught in gill nets in five Transkei estuaries, this paper dealing with the Kei River estuary. ... by densely forested, steep hills, and have a narrow floodplain whereas a much wider floodplain is ..... that 52,50/0 of the fish in the mangrove-dominated Mngazana estuary had tropical affinities ...

  10. The Bass diffusion model on networks with correlations and inhomogeneous advertising

    Science.gov (United States)

    Bertotti, M. L.; Brunner, J.; Modanese, G.

    2016-09-01

    The Bass model, which is an effective forecasting tool for innovation diffusion based on large collections of empirical data, assumes an homogeneous diffusion process. We introduce a network structure into this model and we investigate numerically the dynamics in the case of networks with link density $P(k)=c/k^\\gamma$, where $k=1, \\ldots , N$. The resulting curve of the total adoptions in time is qualitatively similar to the homogeneous Bass curve corresponding to a case with the same average number of connections. The peak of the adoptions, however, tends to occur earlier, particularly when $\\gamma$ and $N$ are large (i.e., when there are few hubs with a large maximum number of connections). Most interestingly, the adoption curve of the hubs anticipates the total adoption curve in a predictable way, with peak times which can be, for instance when $N=100$, between 10% and 60% of the total adoptions peak. This may allow to monitor the hubs for forecasting purposes. We also consider the case of networks with assortative and disassortative correlations and a case of inhomogeneous advertising where the publicity terms are "targeted" on the hubs while maintaining their total cost constant.

  11. Synthetic hepcidin from fish: Uptake and protection against Vibrio anguillarum in sea bass (Dicentrarchus labrax).

    Science.gov (United States)

    Álvarez, Claudio Andrés; Acosta, Félix; Montero, Daniel; Guzmán, Fanny; Torres, Elisa; Vega, Belinda; Mercado, Luis

    2016-08-01

    The generation of a variety of new therapeutic agents to control and reduce the effects of pathogen in aquaculture is urgently needed. The antimicrobial peptides (AMPs) are one of the major components of the innate defenses and typically have broad-spectrum antimicrobial activity. However, absorption and distributions of exogenous AMPs for therapeutics application on farmed fish species need to be studied. Previous studies in our laboratory have shown the properties of hepcidin as an effective antimicrobial peptide produced in fish in response to LPS and iron. Therefore, we decided to investigate the antimicrobial activity of four synthetic variants of hepcidin against Vibrio anguillarum in vitro, and using the more effective peptide we demonstrated the pathogen's ability to protect against the infection in European Sea bass. Additionally the uptake of this peptide after ip injection was demonstrated, reaching its distribution organs such as intestine, head kidney, spleen and liver. The synthetic peptide did not show cytotoxic effects and significantly reduced the accumulated mortalities percentage (23.5%) compared to the European Sea bass control (72.5%) at day 21. In conclusion, synthetic hepcidin shows antimicrobial activity against V. anguillarum and the in vivo experiments suggest that synthetic hepcidin was distributed trough the different organs in the fish. Thus, synthetic hepcidin antimicrobial peptide could have high potential for therapeutic application in farmed fish species. Copyright © 2016 Elsevier Ltd. All rights reserved.

  12. The Bass diffusion model on networks with correlations and inhomogeneous advertising

    CERN Document Server

    Bertotti, M L; Modanese, G

    2016-01-01

    The Bass model, which is an effective forecasting tool for innovation diffusion based on large collections of empirical data, assumes an homogeneous diffusion process. We introduce a network structure into this model and we investigate numerically the dynamics in the case of networks with link density $P(k)=c/k^\\gamma$, where $k=1, \\ldots , N$. The resulting curve of the total adoptions in time is qualitatively similar to the homogeneous Bass curve corresponding to a case with the same average number of connections. The peak of the adoptions, however, tends to occur earlier, particularly when $\\gamma$ and $N$ are large (i.e., when there are few hubs with a large maximum number of connections). Most interestingly, the adoption curve of the hubs anticipates the total adoption curve in a predictable way, with peak times which can be, for instance when $N=100$, between 10% and 60% of the total adoptions peak. This may allow to monitor the hubs for forecasting purposes. We also consider the case of networks with a...

  13. Establishment, survival, site selection and development of Leptorhynchoides thecatus in largemouth bass, Micropterus salmoides.

    Science.gov (United States)

    Leadabrand, C C; Nickol, B B

    1993-06-01

    Establishment, survival and distribution of Leptorhynchoides thecatus (Acanthocephala) were investigated in largemouth bass, Micropterus salmoides, fed 10, 25, or 40 cystacanths and examined at 1, 3 or 5 weeks post-infection. Worms established widely in the alimentary tracts of bass but by 5 weeks post-infection had localized in the pyloric caeca and intercaecal region. Other individuals moved to parenteral sites where they remained immature, though viable. In the 10- and 25-level exposures, establishment and survivorship in the alimentary tract were roughly proportional to the dose of cystacanths. After 1 week post-infection in the 40-level exposure class, numbers of worms in the alimentary tract decreased significantly and parenteral occurrence increased significantly. Total survival of L. thecatus appeared to be density-independent. Maturation of worms was retarded temporarily as intensity of infection increased, but by 5 weeks post-infection worms from all doses were at roughly the same stage of development within sex. The caeca and intercaecal area apparently did not differ in their suitability for maturation.

  14. Response of largemouth bass (Micropterus salmoides) from different thermal environments to increased water temperature.

    Science.gov (United States)

    Mulhollem, Joshua J; Suski, Cory D; Wahl, David H

    2015-08-01

    Due to concerns of global climate change, additional research is needed to quantify the thermal tolerance of species, and how organisms are able to adapt to changes in thermal regime. We quantified the thermal tolerance and thermal stress response of a temperate sportfish from two different thermal environments. One group of largemouth bass (Micropterus salmoides) inhabited thermally enhanced reservoirs (used for power plant cooling), with water temperatures typically 2-5°C warmer than nearby reservoirs. We tested fish for chronic thermal maxima and reaction to an 8°C heat shock using three common physiological indices of stress. We observed no evidence of differences between groups in thermal maxima. We observed no differences in thermal maxima between fish from artificially warmed and natural systems. Our results disagree with research, suggesting differences due to adaptation to different thermal environments. We speculate that behavioral modifications, lack of adequate time for genetic divergence, or the robust genetic plasticity of largemouth bass explain the lack of difference between treatment groups.

  15. Acoustic stress responses in juvenile sea bass Dicentrarchus labrax induced by offshore pile driving.

    Science.gov (United States)

    Debusschere, Elisabeth; Hostens, Kris; Adriaens, Dominique; Ampe, Bart; Botteldooren, Dick; De Boeck, Gudrun; De Muynck, Amelie; Sinha, Amit Kumar; Vandendriessche, Sofie; Van Hoorebeke, Luc; Vincx, Magda; Degraer, Steven

    2016-01-01

    Underwater sound generated by pile driving during construction of offshore wind farms is a major concern in many countries. This paper reports on the acoustic stress responses in young European sea bass Dicentrarchus labrax (68 and 115 days old), based on four in situ experiments as close as 45 m from a pile driving activity. As a primary stress response, whole-body cortisol seemed to be too sensitive to 'handling' bias. On the other hand, measured secondary stress responses to pile driving showed significant reductions in oxygen consumption rate and low whole-body lactate concentrations. Furthermore, repeated exposure to impulsive sound significantly affected both primary and secondary stress responses. Under laboratory conditions, no tertiary stress responses (no changes in specific growth rate or Fulton's condition factor) were noted in young sea bass 30 days after the treatment. Still, the demonstrated acute stress responses and potentially repeated exposure to impulsive sound in the field will inevitably lead to less fit fish in the wild. Copyright © 2015 Elsevier Ltd. All rights reserved.

  16. Endogenous modification of macronutrient selection pattern in sea bass (Dicentrarchus labrax, L.).

    Science.gov (United States)

    Rubio, V C; Sánchez-Vázquez, F J; Zamora, S; Madrid, J A

    2008-09-03

    The use of a single diet with a well defined composition to feed fish throughout their life cycle is an oversimplification that probably does not respond to their metabolic requirements. For example, the seasonal reproduction that characterizes most fish species demands changes in nutritional requirements. Bearing this in mind, the macronutrient selection pattern was studied from January to August in twelve individually housed sea bass exposed to a constant photoperiod (12L:12D h) and temperature (23+/-0.5 degrees C). The endogenous "seasonal" effect on food and energy intake regulation and macronutrient selection was determined, using protein (P), carbohydrate (CH), and fat (F) packaged separately into gelatine capsules, a method that prevents the diet chemosensory properties at oropharyngeal level from interfering with macronutrient selection. Energy intake changed monthly, the highest values being recorded in May and June and the lowest values in March and April. The preliminary results illustrated "seasonal" changes in the sea bass macronutrient selection pattern with, which showed a predominantly proteinic selection during April (53% P, 21% CH, 25% F) and lipidic in July (35% P, 19% CH, 42% F); the increase in fat selection from May to July being statistically significant. This is the first evidence supporting the existence of an endogenous rhythm in the "seasonal" energy regulation and macronutrient selection in fish through post-ingestive mechanisms and probably involving chemosensory detection in the gut and/or post-absorptive mechanisms, although the exact mechanisms involved have yet to be clarified.

  17. Numerical study of the aerodynamics of sound sources in a bass-reflex port

    Directory of Open Access Journals (Sweden)

    V.M. Garcia-Alcaide

    2017-01-01

    Full Text Available The aim of this paper is to study the aerodynamics phenomena of a bass-reflex port that causes noise in the audible frequency range. After discarding structural and mechanical vibration issues, the hypothesis considered is that vortex shedding is the source of the noise. Experimental and numerical evidences of the vortex, an analysis of its noise and the similarities between real and simulated performance are presented. The numerically simulated cases with the original geometry are excited at different frequencies and with modifications of the port geometry. Likewise, the internal performance of an enclosure with a closed port was simulated. The simulations have been performed with axisymmetrical geometries using the open-source OpenFOAM® toolbox. Moreover, experimental measurements were carried out. First, acoustic signal experiments were done to analyse the response of the bass-reflex ports. Secondly, a structure vibration measurement was conducted in order to exclude the cabinet structure vibration as a source of the noise in question. A good agreement was found between numerical and experimental results, especially in the frequency band of the detected noise, i.e. the 1000–1500 Hz range. Despite no remarkable improvement being made with the geometry changes explored, the presented CFD approach has proved a useful and cost-effective tool to address this kind of phenomenon.

  18. The STRIPES trial--support to rural India's public education system.

    Science.gov (United States)

    Eble, Alex; Mann, Vera; Bhakta, Preetha; Lakshminarayana, Rashmi; Frost, Chris; Elbourne, Diana; Boone, Peter

    2010-02-01

    Performance of primary school students in India lags far below government expectations, and major disparity exists between rural and urban areas. The Naandi Foundation has designed and implemented a programme using community members to deliver after-school academic support for children in over 1,100 schools in five Indian states. Assessments to date suggest that it might have a substantial effect. This trial aims to evaluate the impact of this programme in villages of rural Andhra Pradesh and will compare test scores for children in three arms: a control and two intervention arms. In both intervention arms additional after-school instruction and learning materials will be offered to all eligible children and in one arm girls will also receive an additional 'kit' with a uniform and clothes. The trial is a cluster-randomised controlled trial conducted in conjunction with the CHAMPION trial. In the CHAMPION trial 464 villages were randomised so that half receive health interventions aiming to reduce neonatal mortality. STRIPES will be introduced in those CHAMPION villages which have a public primary school attended by at least 15 students at the time of a baseline test in 2008. 214 villages of the 464 were found to fulfil above criteria, 107 belonging to the control and 107 to the intervention arm of the CHAMPION trial. These latter 107 villages will serve as control villages in the STRIPES trial. A further randomisation will be carried out within the 107 STRIPES intervention villages allocating half to receive an additional kit for girls on the top of the instruction and learning materials. The primary outcome of the trial is a composite maths and language test score. The study is designed to measure (i) whether the educational intervention affects the exam score of children compared to the control arm, (ii) if the exam scores of girls who receive the additional kit are different from those of girls living in the other STRIPES intervention arm. One of the goals of

  19. Effects of heavy metal contamination on the macrobenthic fauna in estuaries: The case of the Seine estuary

    Energy Technology Data Exchange (ETDEWEB)

    Dauvin, Jean-Claude [Station Marine de Wimereux, Universite des Sciences et Technologies de Lille, CNRS FRE 2816 ELICO - Ecosystemes Littoraux et Cotiers, 28, Avenue Foch, BP 80, F-62930 Wimereux (France)], E-mail: jean-claude.dauvin@univ-lille1.fr

    2008-07-01

    Heavy metal contamination levels are generally higher in estuaries than in the open sea. Some estuaries, the Seine estuary for example, have particularly high pollution levels of metals, yet continue to support a very high benthic biomass and remain quite productive. Measurements of sediment contamination are highly variable due to diverse chemical analysis methods, sediments origin and sources of contaminants found in the estuaries. Salinity appears to be the principal factor controlling contaminant distribution in the sediment and the overlying and/or interstitial waters; it also affects the bioavailability of contaminants in estuarine sediments. Of course, the response to contaminants varies greatly among species and assemblages. Trace metals explain only a small part of the variation in benthic community structure. Some species, such as the shrimp Crangon crangon, appears vulnerable to metal pollution, while other species, such as Scrobicularia plana, are able to tolerate quite high levels of cadmium in their tissue. This paper demonstrates the wide variability of benthic responses to contamination, which is probably due to the high spatio-temporal heterogeneity of the estuary. To reduce the problems due the heterogeneity and variability observed to date in the available results, it will be necessary to encourage integrated estuarine studies, in which sedimentologists, chemists, and biologists work together on the same campaigns at the same sites.

  20. Evidence of estrogenic endocrine disruption in smallmouth and largemouth bass inhabiting Northeast U.S. National Wildlife Refuge waters: A reconnaissance study

    Science.gov (United States)

    Iwanowicz, Luke R.; Blazer, Vicki; Pinkney, A.E.; Guy, C.P.; Major, A.M.; Munney, K.; Mierzykowski, S.; Lingenfelser, S.; Secord, A.; Patnode, K.; Kubiak, T.J.; Stern, C.; Hahn, Cassidy M.; Iwanowicz, Deborah; Walsh, Heather L.; Sperry, Adam J.

    2016-01-01

    Intersex as the manifestation of testicular oocytes (TO) in male gonochoristic fishes has been used as an indicator of estrogenic exposure. Here we evaluated largemouth bass (Micropterus salmoides) or smallmouth bass (Micropterus dolomieu) form 19 National Wildlife Refuges (NWRs) in the Northeast U.S. inhabiting waters on or near NWR lands for evidence of estrogenic endocrine disruption. Waterbodies sampled included rivers, lakes, impoundments, ponds, and reservoirs. Here we focus on evidence of endocrine disruption in male bass evidenced by gonad histopathology including intersex or abnormal plasma vitellogenin (Vtg) concentrations. During the fall seasons of 2008–2010, we collected male smallmouth bass (n=118) from 12 sites and largemouth bass (n=173) from 27 sites. Intersex in male smallmouth bass was observed at all sites and ranged from 60% to 100%; in male largemouth bass the range was 0–100%. Estrogenicity, as measured using a bioluminescent yeast reporter, was detected above the probable no effects concentration (0.73 ng/L) in ambient water samples from 79% of the NWR sites. Additionally, the presence of androgen receptor and glucocorticoid receptor ligands were noted as measured via novel nuclear receptor translocation assays. Mean plasma Vtg was elevated (>0.2 mg/ml) in male smallmouth bass at four sites and in male largemouth bass at one site. This is the first reconnaissance survey of this scope conducted on US National Wildlife Refuges. The baseline data collected here provide a necessary benchmark for future monitoring and justify more comprehensive NWR-specific studies.

  1. Spatial habitat for eel larva at Cimandiri estuary, West Java

    Science.gov (United States)

    Takarina, N. D.; Supriatna

    2017-07-01

    The estuarine ecosystem is known as suitable breeding sites for fishes because this particular habitat is receiving continuous organic matters from river ways and constant sunlight due to its depth that allows sunlight penetration. Cimandiri estuary is one of the estuaries located in the south of Java Island close to the Indian Ocean and known as a suitable habitat for eel larva that routinely collected by local people. Eel habitat has a relationship with the dynamic of space. This dynamic influenced by season, water flow, tide, bathymetry, salinity and dissolved oxygen (DO). The geographic information system is an approach in studying habitat dynamic, through modeling. Furthermore, the spatial model for eel larva habitat is required for land use planning that aimed to achieve sustainable eels larva rearing and conserve estuarine habitat as well. The aim of this research was to investigate dynamics on spatial habitat of eel larva at Cimandiri estuary, West Java.

  2. Does boat traffic cause displacement of fish in estuaries?

    Science.gov (United States)

    Becker, Alistair; Whitfield, Alan K; Cowley, Paul D; Järnegren, Johanna; Næsje, Tor F

    2013-10-15

    Estuaries are increasingly under threat from a variety of human impacts. Recreational and commercial boat traffic in urban areas may represent a significant disturbance to fish populations and have particularly adverse effects in spatially restricted systems such as estuaries. We examined the effects of passing boats on the abundance of different sized fish within the main navigation channel of an estuary using high resolution sonar (DIDSON). Both the smallest (100-300 mm) and largest (>501 mm) size classes had no change in their abundance following the passage of boats. However, a decrease in abundance of mid-sized fish (301-500 mm) occurred following the passage of boats. This displacement may be attributed to a number of factors including noise, bubbles and the rapidly approaching object of the boat itself. In highly urbanised estuarine systems, regular displacement by boat traffic has the potential to have major negative population level effects on fish assemblages. Copyright © 2013 Elsevier Ltd. All rights reserved.

  3. Assessment of Caudal Fin Clips as a Non-lethal Technique for Predicting Muscle Tissue Mercury Concentrations in Largeouth Bass

    Science.gov (United States)

    The statistical relationship between total mercury (Hg) concentration in clips from the caudal fin and muscle tissue of largemouth bass (Micropterus salmoides) from 26 freshwater sites in Rhode Island, USA was developed and evaluated to determine the utility of fin clip analysis ...

  4. Husbandry streaa during early life stages affects the stress response and health status of juvenile sea bass, Dicentrarchus labrax.

    NARCIS (Netherlands)

    Varsamos, S.; Flik, G.; Pepin, S.E.; Wendelaar Bonga, S.E.; Breuil, G.

    2006-01-01

    Abstract In aquaculture management it is important to establish objective criteria to assess health and welfare of the fish. Here we show that European sea bass (Dicentrarchus labrax) confronted with husbandry-associated stress (tank cleaning, i.e. scrubbing, and water temperature variation) during

  5. MEASUREMENT OF MECURY IN FISH SCALES AS AN ASSESSMENT METHOD FOR PREDICTING MUSCLE TISSUE MERCURY CNOCENTRATIONS IN LARGEMOUTH BASS

    Science.gov (United States)

    The relationship between total mercury (Hg) concentration in fish scales and in tissues of largemouth bass (Micropterus salmoides) from 20 freshwater sites was developed and evaluated to determine whether scale analysis would allow a non lethal and convenient method for predicti...

  6. Multidisciplinary exploratory study of a geothermal resource in the active volcanic arc of Basse-Terre (Guadeloupe, Lesser Antilles)

    Science.gov (United States)

    Navelot, Vivien; Favier, Alexiane; Géraud, Yves; Diraison, Marc; Corsini, Michel; Verati, Chrystèle; Lardeaux, Jean-Marc; Mercier de Lépinay, Jeanne; Munschy, Marc

    2017-04-01

    The GEOTREF project (high enthalpy geothermal energy in fractured reservoirs), supported by the French government program, "Investissements d'avenir" develops a sustainable geothermal resource in the Vieux Habitants area, 8-km south of the currently exploited Bouillante geothermal field. The Basse Terre Island is a recent volcanic arc (geothermal gradient of 70 ˚ C/km.

  7. First isolation of Aeromonas salmonicida subspecies salmonicida from diseased sea bass, Dicentrarchus labrax (L., cultured in Spain

    Directory of Open Access Journals (Sweden)

    Clara Fernández-Álvarez

    2016-11-01

    Full Text Available This work represents the first description of Aeromonas salmonicida subsp. salmonicida as causative agent of furunculosis in cultured sea bass, Dicentrarchus labrax (L.. Cumulative mortality in affected fish from two floating cages in the Mediterranean coast of Spain was 3.8%. Affected sea bass did not show the typical external signs of furunculosis in the first stages of the disease, however, when the disease progressed, open ulcers appeared on the skin and muscle. Internally, splenomegaly was the only pathological sign observed. Samples from diseased fish were subjected to standardized assays for pathogens screening. Negative results were obtained for parasites and fish viruses. A Gram-stain-negative rod-shaped bacterium was observed in smears from liver, kidney and spleen of all analysed fish. Pure bacterial cultures were recovered from liver, kidney and spleen of all diseased fish sampled during the two different outbreaks. Bacteriological, serological, molecular and chemotaxonomic analysis allowed the identification of the causative agent of sea bass mortalities as Aeromonas salmonicida subsp. salmonicida. The bacterial strains were susceptible to most of antimicrobial agents usually employed in aquaculture except to oxytetracycline. Pathogenicity assays demonstrated that the isolated bacteria were virulent for sea bass, turbot and rainbow trout.

  8. Use of the Phantom Electrode strategy to improve bass frequency perception for music listening in cochlear implant users.

    Science.gov (United States)

    Munjal, Tina; Roy, Alexis T; Carver, Courtney; Jiradejvong, Patpong; Limb, Charles J

    2015-09-01

    The Phantom Electrode strategy makes use of partial bipolar stimulation on the two most apical electrodes in an effort to extend the frequency range available to cochlear implant (CI) users. This study aimed to quantify the effect of the Phantom Electrode strategy on bass frequency perception in music listening in CI users. Eleven adult Advanced Bionics users with the Fidelity 120 processing strategy and 16 adult normal hearing (NH) individuals participated in the study. All subjects completed the CI-multiple stimulus with hidden reference and anchor (MUSHRA), a test of an individual's ability to make discriminations in sound quality following the removal of bass frequency information. NH participants completed the CI-MUSHRA once, whereas CI users completed the task twice - once with their baseline clinical program and once with the Phantom Electrode strategy, in random order. CI users' performance was assessed in comparison with NH performance. The Phantom Electrode strategy improved CI users performance on the CI-MUSHRA compared with Fidelity 120. Creation of a Phantom Electrode percept through partial bipolar stimulation of the two most apical electrodes appears to improve CI users' perception of bass frequency information in music, contributing to greater accuracy in the ability to detect alterations in musical sound quality. The Phantom Electrode processing strategy may enhance the experience of listening to music and thus acoustic stimuli more broadly by improving perception of bass frequencies, through direction of current towards the apical portion of the cochlea beyond the termination of the electrode.

  9. Estimation of peacock bass (Cichla spp. mortality rate during catch-release fishing employing different post-capture procedures

    Directory of Open Access Journals (Sweden)

    L. S. A. Barroco

    2017-08-01

    Full Text Available Abstract The effect of catch-and-release fishing on the survival of peacock bass (Cichla spp. was evaluated by comparing two types of artificial bait (jig and shallow-diver plugs and two types of post-catch confinement. Two experiments were conducted during the periods January-February and October-November 2012 in the Unini River, a right-bank tributary of the Negro River. In total, 191 peacock bass were captured. Both groups of fish were subjected to experimental confinement (collective and individual for three days. Additionally, 11 fish were tagged with radio transmitters for telemetry monitoring. Mortality rate was estimated as the percentage of dead individuals for each type of bait and confinement. For peacock bass caught with jig baits, mortality was zero. The corresponding figure for shallow-diver bait was 1.66% for fish in collective containment, 18.18% for fish monitored by telemetry and 0% for individuals confined individually. Our results show low post-release mortality rates for peacock bass. Furthermore, neither the type of confinement nor the type of bait had a statistically significant influence on mortality rates. While future studies could include other factors in the analysis, our results show that catch-and-release fishing results in low mortality rates.

  10. Estimation of peacock bass (Cichla spp.) mortality rate during catch-release fishing employing different post-capture procedures.

    Science.gov (United States)

    Barroco, L S A; Freitas, C E C; Lima, Á C

    2017-08-17

    The effect of catch-and-release fishing on the survival of peacock bass (Cichla spp.) was evaluated by comparing two types of artificial bait (jig and shallow-diver plugs) and two types of post-catch confinement. Two experiments were conducted during the periods January-February and October-November 2012 in the Unini River, a right-bank tributary of the Negro River. In total, 191 peacock bass were captured. Both groups of fish were subjected to experimental confinement (collective and individual) for three days. Additionally, 11 fish were tagged with radio transmitters for telemetry monitoring. Mortality rate was estimated as the percentage of dead individuals for each type of bait and confinement. For peacock bass caught with jig baits, mortality was zero. The corresponding figure for shallow-diver bait was 1.66% for fish in collective containment, 18.18% for fish monitored by telemetry and 0% for individuals confined individually. Our results show low post-release mortality rates for peacock bass. Furthermore, neither the type of confinement nor the type of bait had a statistically significant influence on mortality rates. While future studies could include other factors in the analysis, our results show that catch-and-release fishing results in low mortality rates.

  11. Novel Low Cost Organic Vapor Jet Printing of Striped High Efficiency Phosphorescent OLEDs for White Lighting

    Energy Technology Data Exchange (ETDEWEB)

    Mike Hack

    2008-12-31

    In this program, Universal Display Corporation and University of Michigan proposed to integrate three innovative concepts to meet the DOE's Solid State Lighting (SSL) goals: (1) high-efficiency phosphorescent organic light emitting device (PHOLED{trademark}) technology, (2) a white lighting design that is based on a series of red, green and blue OLED stripes, and (3) the use of a novel cost-effective, high rate, mask-less deposition process called organic vapor jet printing (OVJP). Our PHOLED technology offers up to four-times higher power efficiency than other OLED approaches for general lighting. We believe that one of the most promising approaches to maximizing the efficiency of OLED lighting sources is to produce stripes of the three primary colors at such a pitch (200-500 {mu}m) that they appear as a uniform white light to an observer greater than 1 meter (m) away from the illumination source. Earlier work from a SBIR Phase 1 entitled 'White Illumination Sources Using Striped Phosphorescent OLEDs' suggests that stripe widths of less than 500 {mu}m appear uniform from a distance of 1m without the need for an external diffuser. In this program, we intend to combine continued advances in this PHOLED technology with the striped RGB lighting design to demonstrate a high-efficiency, white lighting source. Using this background technology, the team has focused on developing and demonstrating the novel cost-effective OVJP process to fabricate these high-efficiency white PHOLED light sources. Because this groundbreaking OVJP process is a direct printing approach that enables the OLED stripes to be printed without a shadow mask, OVJP offers very high material utilization and high throughput without the costs and wastage associated with a shadow mask (i.e. the waste of material that deposits on the shadow mask itself). As a direct printing technique, OVJP also has the potential to offer ultra-high deposition rates (> 1,000 Angstroms/second) for any size or

  12. Modelling extreme climatic events in Guadalquivir Estuary ( Spain)

    Science.gov (United States)

    Delgado, Juan; Moreno-Navas, Juan; Pulido, Antoine; García-Lafuente, Juan; Calero Quesada, Maria C.; García, Rodrigo

    2017-04-01

    Extreme climatic events, such as heat waves and severe storms are predicted to increase in frequency and magnitude as a consequence of global warming but their socio-ecological effects are poorly understood, particularly in estuarine ecosystems. The Guadalquivir Estuary has been anthropologically modified several times, the original salt marshes have been transformed to grow rice and cotton and approximately one-fourth of the total surface of the estuary is now part of two protected areas, one of them is a UNESCO, MAB Biosphere Reserve. The climatic events are most likely to affect Europe in forthcoming decades and a further understanding how these climatic disturbances drive abrupt changes in the Guadalquivir estuary is needed. A barotropic model has been developed to study how severe storm events affects the estuary by conducting paired control and climate-events simulations. The changes in the local wind and atmospheric pressure conditions in the estuary have been studied in detail and several scenarios are obtained by running the model under control and real storm conditions. The model output has been validated with in situ water elevation and good agreement between modelled and real measurements have been obtained. Our preliminary results show that the model demonstrated the capability describe of the tide-surge levels in the estuary, opening the possibility to study the interaction between climatic events and the port operations and food production activities. The barotropic hydrodynamic model provide spatially explicit information on the key variables governing the tide dynamics of estuarine areas under severe climatic scenarios . The numerical model will be a powerful tool in future climate change mitigation and adaptation programs in a complex socio-ecological system.

  13. How Hydrodynamics Control Algal Blooms in the Ythan Estuary, Scotland

    Science.gov (United States)

    Champangern, K.; Hoey, T.; Thomas, R.; Mitchard, E. T.

    2016-12-01

    The Ythan estuary, northeast Scotland, was designated in 2000 as a Nitrate Vulnerable Zone (NVZ) under the European Commission (EC) Nitrates Directive. Much of the catchment is intensively farmed and water quality has been adversely affected by nutrients from agricultural fertilisers. As a result, algal mats develop annually on tidal flats where sediment from upstream and from the adjacent dune systems is deposited. Understanding the patterns of water (river and ocean) circulation in the estuary as well as nutrient transport in the estuary is crucial for comprehending the role of several factors (elevation; sediment characteristics; nutrient flux) control the locations and scale of annual algal blooms. To understand the controls, the Delft3d flow model is used to simulate hydrodynamic patterns and nutrient pathways in the estuary during high flow and low flow events. The results from the simulations reveal that during high river flow in the central part of the estuary, where algal growth is most extensive, flow velocity are higher during flood tide than in the ebb. However, the velocity in this area remain very low throughout the tidal cycle. During low river flow, the velocity during one tidal cycle has the same pattern as in high flow event, although the velocity is generally slightly higher than during high river flow except during slack tide where velocity and shear stress are lower. The modelled nutrient pathways and their concentration also show the movement of nutrients with regard to interaction of both fresh and sea water. The concentration is greatest during low tide in the upper estuary followed by middle and lower estuary, while appearing lowest during high tide. The nutrients mobilise along the main channel where velocity is greater. However, they are also dispersed to shallower areas where algal growth is extensive and remain high concentrated in the areas until a new flood tide. These model results are validated against measured data, of which the

  14. Uranium export from a sandy beach subterranean estuary in Australia

    Science.gov (United States)

    Sanders, Christian J.; Santos, Isaac R.; Sadat-Noori, Mahmood; Maher, Damien T.; Holloway, Ceylena; Schnetger, Bernhard; Brumsack, Hans-J.

    2017-11-01

    Few studies exist on the contribution of subterranean estuaries (STEs) to the oceanic uranium (U) budget. Here, we estimate the dissolved U fluxes out of a quartz sand STE located on the east coast of Australia. Our results indicate that the advective flow of seawater in permeable sands enhances cycling of U in the STE. Dissolved U concentrations ranged from 25 nM in the STE to an effective zero salinity end-member of 3.8 nM in the surface estuary. The dissolved U (salinity corrected) concentrations were positively correlated to Fe (r2 = 0.49 p marine U cycle.

  15. Seasonal differential expression of KiSS-1/GPR54 in the striped hamsters (Cricetulus barabensis) among different tissues.

    Science.gov (United States)

    Xu, Laixiang; Xue, Huiliang; Li, Shenning; Xu, Jinhui; Chen, Lei

    2017-05-01

    Kisspeptins and G protein coupled receptor (GPR54) play significant roles in regulating reproductive activity among seasonally reproductive animals; however, the mechanisms of KiSS-1 and GPR54 gene affecting the seasonal reproduction in striped hamster are still unknown. In this study, real-time quantitative polymerase chain reaction was employed to examine the expression profiles of KiSS-1 and GPR54 in the hypothalamus, ovaries, testes, uterus and epididymis of striped hamsters across 4 different seasons. Our results showed that, across different seasons, the KiSS-1 expression mode of male striped hamsters and the GPR54 expression mode of female striped hamsters were consistent with the seasonal photoperiod in the hypothalamus. Meanwhile, across different seasons, the expression profile of KiSS-1 in the testes and the GPR54 expression profile of male striped hamsters in the hypothalamus were consistent with the intensity of their seasonal reproductive activity. Among different tissues, the expression trend for GPR54 is consistent across 4 seasons, while that for KiSS-1 is tissue-dependent. The expression trend for GPR54 across 4 seasons is the same regardless of gender, while that for KiSS-1 is dramatically different and sex-dependent across different seasons. These results suggest that the expressions of KiSS-1 and GPR54 in the striped hamsters were regulated by complicated mechanisms, and the regulatory mechanisms in the striped hamsters are seasonal-dependent and sex-dependent. This research will provide a theoretical basis for studying how KiSS-1 and GPR54 affect seasonal reproduction and the mechanisms behind their influence. © 2016 International Society of Zoological Sciences, Institute of Zoology/Chinese Academy of Sciences and John Wiley & Sons Australia, Ltd.

  16. Comparison of diets for Largemouth and Smallmouth Bass in Eastern Lake Ontario using DNA barcoding and stable isotope analysis.

    Science.gov (United States)

    Nelson, Erich J H; Holden, Jeremy; Eves, Robert; Tufts, Bruce

    2017-01-01

    Largemouth (LMB: Micropterus salmoides) and Smallmouth Bass (SMB: Micropterus dolomieu) are important species in the recreational fisheries of the Laurentian Great Lakes. The invasion of the Round Goby (Neogobius melanostomus) into these lakes has changed several facets of black bass biology, but there is still much to learn about the relationship between these species. Previous dietary analyses have shown Round Goby to be important prey for bass, but have been limited by low visual identification rates of dissected stomach items. Within the present study, DNA barcoding and stable isotope analysis improve prey identification and provide a more quantitative dietary analysis of adult black bass in Lake Ontario, comparing the importance of Round Goby as prey between these two species. Eighty-four LMB (406mm fork length ±4mm SEM) and two hundred sixty-four SMB (422mm ±2mm) obtained as tournament mortalities had prey identified using DNA-based methods. Round Goby was the most prevalent prey species for both predators. The diet of LMB was three times more diverse than that of SMB, which almost entirely consists of Round Goby. Our results provide further support that recent increases in the size of Lake Ontario bass are a result of Round Goby consumption, and that the effects of this dietary shift on body condition are greater for SMB. Techniques developed in this study include reverse-oriented dual priming oligonucleotides used as blocking primers for predator DNA, and an automated design approach of restriction fragment length polymorphism tests for identifying prey DNA barcodes.

  17. Comparison of diets for Largemouth and Smallmouth Bass in Eastern Lake Ontario using DNA barcoding and stable isotope analysis

    Science.gov (United States)

    Holden, Jeremy; Eves, Robert; Tufts, Bruce

    2017-01-01

    Largemouth (LMB: Micropterus salmoides) and Smallmouth Bass (SMB: Micropterus dolomieu) are important species in the recreational fisheries of the Laurentian Great Lakes. The invasion of the Round Goby (Neogobius melanostomus) into these lakes has changed several facets of black bass biology, but there is still much to learn about the relationship between these species. Previous dietary analyses have shown Round Goby to be important prey for bass, but have been limited by low visual identification rates of dissected stomach items. Within the present study, DNA barcoding and stable isotope analysis improve prey identification and provide a more quantitative dietary analysis of adult black bass in Lake Ontario, comparing the importance of Round Goby as prey between these two species. Eighty-four LMB (406mm fork length ±4mm SEM) and two hundred sixty-four SMB (422mm ±2mm) obtained as tournament mortalities had prey identified using DNA-based methods. Round Goby was the most prevalent prey species for both predators. The diet of LMB was three times more diverse than that of SMB, which almost entirely consists of Round Goby. Our results provide further support that recent increases in the size of Lake Ontario bass are a result of Round Goby consumption, and that the effects of this dietary shift on body condition are greater for SMB. Techniques developed in this study include reverse-oriented dual priming oligonucleotides used as blocking primers for predator DNA, and an automated design approach of restriction fragment length polymorphism tests for identifying prey DNA barcodes. PMID:28771612

  18. Transcriptome assembly and identification of genes and SNPs associated with growth traits in largemouth bass (Micropterus salmoides).

    Science.gov (United States)

    Li, Shengjie; Liu, Hao; Bai, Junjie; Zhu, Xinping

    2017-04-01

    Growth is one of the most crucial economic traits of all aquaculture species, but the molecular mechanisms involved in growth of largemouth bass (Micropterus salmoides) are poorly understood. The objective of this study was to screen growth-related genes of M. salmoides by RNA sequencing and identify growth-related single-nucleotide polymorphism (SNP) markers through a growth association study. The muscle transcriptomes of fast- and slow-growing largemouth bass were obtained using the RNA-Seq technique. A total of 54,058,178 and 54,742,444 qualified Illumina read pairs were obtained for the fast-growing and slow-growing groups, respectively, giving rise to 4,865,236,020 and 4,926,819,960 total clean bases, respectively. Gene expression profiling showed that 3,530 unigenes were differentially expressed between the fast-growing and slow-growing phenotypes (false discovery rate ≤0.001, the absolute value of log2 (fold change) ≥1), including 1,441 up-regulated and 2,889 down-regulated unigenes in the fast-growing largemouth bass. Analysis of these genes revealed that several signalling pathways, including the growth hormone-insulin-like growth factor 1 axis and signalling pathway, the glycolysis pathway, and the myostatin/transforming growth factor beta signalling pathway, as well as heat shock protein, cytoskeleton, and myofibril component genes might be associated with muscle growth. From these genes, 10 genes with putative SNPs were selected, and 17 SNPs were genotyped successfully. Marker-trait analysis in 340 individuals of Youlu No. 1 largemouth bass revealed three SNPs associated with growth in key genes (phosphoenolpyruvate carboxykinase 1, FOXO3b, and heat shock protein beta-1). This research provides information about key genes and SNPs related to growth, providing new clues to understanding the molecular basis of largemouth bass growth.

  19. Assessing the Effects of Suomi NPP VIIRS M15/M16 Detector Radiometric Stability and Relative Spectral Response Variation on Striping

    Directory of Open Access Journals (Sweden)

    Zhuo Wang

    2016-02-01

    Full Text Available Modern satellite radiometers have many detectors with different relative spectral response (RSR. Effect of RSR differences on striping and the root cause of striping in sensor data record (SDR radiance and brightness temperature products have not been well studied. A previous study used MODTRAN radiative transfer model (RTM to analyze striping. In this study, we make efforts to find the possible root causes of striping. Line-by-Line RTM (LBLRTM is used to evaluate the effect of RSR difference on striping and the atmospheric dependency for VIIRS bands M15 and M16. The results show that previous study using MODTRAN is repeatable: the striping is related to the difference between band-averaged and detector-level RSR, and the BT difference has some atmospheric dependency. We also analyzed VIIRS earth view (EV data with several striping index methods. Since the EV data is complex, we further analyze the onboard calibration data. Analysis of Variance (ANOVA test shows that the noise along track direction is the major reason for striping. We also found evidence of correlation between solar diffuser (SD and blackbody (BB for detector 1 in M15. Digital Count Restoration (DCR and detector instability are possibly related to the striping in SD and EV data, but further analysis is needed. These findings can potentially lead to further SDR processing improvements.

  20. Hydrologie et morphologie de l'estuaire du fleuve Sassandra, Basse ...

    African Journals Online (AJOL)

    Le taux d'oxygène, très faible à l'embouchure avec une valeur de 2 mg /L contre 8,30 mg/L dans la branche droite du fleuve couverte par la végétation. ... and the bathymetric sunrises made in the estuary of theSassandrariver, allowed to characterize the hydrology and the morphology of the bottom of this mouth. On all the ...