WorldWideScience

Sample records for energetic macromolecular ion

  1. Observation of enhanced radial transport of energetic ion due to energetic particle mode destabilized by helically-trapped energetic ion in the Large Helical Device

    Science.gov (United States)

    Ogawa, K.; Isobe, M.; Kawase, H.; Nishitani, T.; Seki, R.; Osakabe, M.; LHD Experiment Group

    2018-04-01

    A deuterium experiment was initiated to achieve higher-temperature and higher-density plasmas in March 2017 in the Large Helical Device (LHD). The central ion temperature notably increases compared with that in hydrogen experiments. However, an energetic particle mode called the helically-trapped energetic-ion-driven resistive interchange (EIC) mode is often excited by intensive perpendicular neutral beam injections on high ion-temperature discharges. The mode leads to significant decrease of the ion temperature or to limiting the sustainment of the high ion-temperature state. To understand the effect of EIC on the energetic ion confinement, the radial transport of energetic ions is studied by means of the neutron flux monitor and vertical neutron camera newly installed on the LHD. Decreases of the line-integrated neutron profile in core channels show that helically-trapped energetic ions are lost from the plasma.

  2. Energetic Ion Loss Diagnostic for the Wendelstein 7-AS Stellarator

    International Nuclear Information System (INIS)

    Darrow, D. S.; Werner, A.; Weller, A.

    2000-01-01

    A diagnostic to measure the loss of energetic ions from the Wendelstein 7-AS (W7-AS) stellarator has been built. It is capable of measuring losses of both neutral beam ions and energetic ions arising from ion cyclotron resonant heating. The probe can measure losses of both clockwise and counterclockwise-going energetic ions simultaneously, and accepts a wide range of pitch angles in both directions. Initial measurements by the diagnostic are reported

  3. Nonperturbative effects of energetic ions on Alfven eigenmodes

    International Nuclear Information System (INIS)

    Todo, Y.; Nakajima, N.; Shinohara, K.; Takechi, M.; Ishikawa, M.; Yamamoto, S.

    2005-01-01

    Linear properties and nonlinear evolutions of an energetic-ion driven instability in a JT-60U plasma were investigated using a simulation code for magnetohydrodynamics and energetic particles. The spatial profile of the unstable mode peaks near the plasma center where the safety factor profile is flat. The unstable mode is not a toroidal Alfven eigenmode (TAE) because the spatial profile deviates from the expected location of TAE and the spatial profile consists of a single primary harmonic m/n = 2/1 where m, n are poloidal and toroidal mode numbers. The real frequency of the unstable mode is close to the experimental starting frequency of the fast frequency sweeping mode. The simulation results demonstrate that the energetic ion orbit width and the energetic ion pressure significantly broaden radial profile of the unstable mode. For the smallest value among the investigated energetic ion orbit width, the unstable mode is localized within 20% of the minor radius. This gives an upper limit of the spatial profile width of the unstable mode which the magnetohydrodynamic effects alone can induce. For the experimental condition of the JT-60U plasma, the energetic ions broaden the spatial profile of the unstable mode by a factor of 3 compared with the smallest orbit width case. The unstable mode is primarily induced by the energetic particles. It is demonstrated that the frequency shifts both upward and downward in the nonlinear evolution at the rate close to that of the fast frequency sweeping mode. In addition to the energetic particle mode in the JT-60U plasma, an investigation of TAE in an LHD-like plasma using the simulation code for the helical coordinate system is reported. (author)

  4. Nonperturbative effects of energetic ions on Alfven eigenmodes

    International Nuclear Information System (INIS)

    Todo, Y.; Nakajima, N.; Shinohara, Kouji; Takechi, Manabu; Ishikawa, Masao

    2005-01-01

    Linear properties and nonlinear evolutions of an energetic-ion driven instability in a JT-60U plasma were investigated using a simulation code for magnetohydrodynamics and energetic particles. The spatial profile of the unstable mode peaks near the plasma center where the safety factor profile is flat. The unstable mode is not a toroidal Alfven eigenmode (TAE) because the spatial profile deviates from the expected location of TAE and the spatial profile consists of a single primary harmonic m/n=2/1 where m, n are poloidal and toroidal mode numbers. The real frequency of the unstable mode is close to the experimental starting frequency of the fast frequency sweeping mode. The simulation results demonstrate that the energetic ion orbit width and the energetic ion pressure significantly broaden radial profile of the unstable mode. For the smallest value among the investigated energetic ion orbit width, the unstable mode is localized within 20% of the minor radius. This gives an upper limit of the spatial profile width of the unstable mode which the magnetohydrodynamic effects alone can induce. For the experimental condition of the JT-60U plasma, the energetic ions broaden the spatial profile of the unstable mode by a factor of 3 compared with the smallest orbit width case. The unstable mode is primarily induced by the energetic particles. It is demonstrated that the frequency shifts both upward and downward in the nonlinear evolution at the rate close to that of the fast frequency sweeping mode. In addition to the energetic particle mode in the JT-60U plasma, an investigation of TAE in an LHD-like plasma using the simulation code for the helical coordinate system is reported. (author)

  5. Neoclassical transport of energetic beam ions in the Large Helical Device

    International Nuclear Information System (INIS)

    Murakami, Sadayoshi; Yamada, Hiroshi; Kaneko, Osamu

    2000-01-01

    The neoclassical (collisional) transport of energetic ions is investigated by the global neoclassical transport simulation in the Large Helical Device (LHD). The steady state distributions of energetic ions are evaluated assuming an energetic particle source by NBI heating (tangentally injected). Significant radial transport of energetic ions can be seen due to the radial motion of trapped particles in the velocity region below near critical velocity. Our simulation results show relatively good agreements with the experimental results of fast particle measurements in the LHD. This suggests an important role of neoclassical transport in the radial transport process of energetic ions in heliotrons. (author)

  6. Resistive interchange mode destabilized by helically trapped energetic ions and its effects on energetic ions and bulk plasmas

    International Nuclear Information System (INIS)

    Du, X.D.; Toi, K.; Osakabe, M.

    2014-10-01

    A resistive interchange mode with bursting behavior and rapid frequency chirping in the range less than 10 kHz is observed for the first time in the magnetic hill region of net current-free, low beta LHD (Large Helical Device) plasmas during high power injection of perpendicular neutral beams. The mode resonates with the precession motion of helically trapped energetic beam ions, following the resonant condition. The radial mode structure is found to be very similar to that of usual pressure-driven interchange mode, of which radial displacement eigenfunction has an even function around the rational surface. This beam driven mode is excited when the beta value of helically trapped energetic ions exceed a certain threshold. The radial transport of helically trapped energetic ions induced by the mode transiently generates significant radial electric field near the plasma peripheral region. Thus generated radial electric field clearly suppresses micro turbulence and improves bulk plasma confinement, suggesting strong flow shear generation. (author)

  7. Effects of energetic heavy ions on electromagnetic ion cyclotron wave generation in the plasmapause region

    International Nuclear Information System (INIS)

    Kozyra, J.U.; Cravens, T.E.; Nagy, A.F.; Fontheim, E.G.; Ong, R.S.B.

    1984-01-01

    An expression for the linear electromagnetic ion cyclotron convective growth rate has been derived, considering multiple ions in the energetic anisotropic component of the plasma (which provides the free energy for the instability) as well as in the cold component of the plasma. This represents a modification of recent treatments investigating electromagnetic ion cyclotron growth rates which have considered only hydrogen ions in the energetic component. Four major effects on the growth and propagation characteristics result from inclusion of heavy ions in the energetic component. Some wave growth occurs at low frequencies below the corresponding marginally unstable wave mode for each heavy ion. Enhanced quasi-monochronomatic peaks in the convective growth rate appear just below the O + and He + gyrofrequency and can be quite pronounced for certain plasma conditions. Stop bands, decreased group velocity and other effects normally attributed to cold heavy ions can be produced or enhanced by heavy ions in the energetic plasma component. Partial or complete suppression of wave growth at frequencies above the marginally unstable wave mode for a particular energetic heavy ion can greatly alter the growth rates that would occur in the absence of this energetic heavy ion. The expression for the linear electromagnetic ion cyclotron convective growth rate along with appropriate plasma parameters was used to investigate the nature of linear wave growth in the plasmapause region. The frequencies of peaks in the convective growth rate given by this model compare favorably with wave measurements in this region. It is conceivable that through wave-particle interactions, electromagnetic ion cyclotron waves could supply the energy source for various plasmapause region phenomena such as the O + torus, the plasma cloak and stable auroral red arcs

  8. Effect of Trapped Energetic Ions on MHD Activity in Spherical Tori

    International Nuclear Information System (INIS)

    White, R.B.; Kolesnichenko, Ya.I.; Lutsenko, V.V.; Marchenko, V.S.

    2002-01-01

    It is shown that the increase of beta (the ratio of plasma pressure to the magnetic field pressure) may change the character of the influence of trapped energetic ions on MHD stability in spherical tori. Namely, the energetic ions, which stabilize MHD modes (such as the ideal-kink mode, collisionless tearing mode, and semi-collisional tearing mode) at low beta, have a destabilizing influence at high beta unless the radial distribution of the energetic ions is very peaked

  9. High frequency fishbone driven by passing energetic ions in tokamak plasmas

    Science.gov (United States)

    Wang, Feng; Yu, L. M.; Fu, G. Y.; Shen, Wei

    2017-05-01

    High frequency fishbone instability driven by passing energetic ions was first reported in the Princeton beta experiment with tangential neutral-beam-injection (Heidbrink et al 1986 Phys. Rev. Lett. 57 835-8). It could play an important role for ITER-like burning plasmas, where α particles are mostly passing particles. In this work, a generalized energetic ion distribution function and finite drift orbit width effect are considered to improve the theoretical model for passing particle driving fishbone instability. For purely passing energetic ions with zero drift orbit width, the kinetic energy δ {{W}k} is derived analytically. The derived analytic expression is more accurate as compared to the result of previous work (Wang 2001 Phys. Rev. Lett. 86 5286-8). For a generalized energetic ion distribution function, the fishbone dispersion relation is derived and is solved numerically. Numerical results show that broad and off-axis beam density profiles can significantly increase the beam ion beta threshold {βc} for instability and decrease mode frequency.

  10. Collective Thomson scattering in tokamaks having energetic ions

    International Nuclear Information System (INIS)

    Myer, R.C.; Woskov, P.P.; Machuzak, J.S.; Sigmar, D.J.; Cohn, D.R.; Bretz, N.L.; Efthimion, P.C.; Colestock, P.L.

    1989-01-01

    The authors discuss how collective Thomson scattering (CTS), using high power gyrotrons or long wavelength lasers,m shows promise as a powerful non-intrusive diagnostic of fast-ion transport as it may be capable of measuring the fast-ion velocity distribution and density profile with good spatial and temporal resolution. In addition, CTS may be used as a diagnostic for detecting localized power deposition in the background plasma. High power CTS systems are presently being planned for TFTR, JET, and CIT. Recent theoretical analysis suggests that an energetic (200-800 keV) He 3 minority can be produced in TFTR by ion cyclotron heating (ICH). Such an energetic population would be useful for simulating the energetic alpha-particles produced in a burning plasma. Since the ICH generated distribution is non-Maxwellian, the authors generalize the theoretical analysis of CTS to allow for particle distributions which can be represented by various orthogonal polynomial expansions. They evaluate the efficacy of CTS in detecting a fast He 3 component and determine the sensitivity of the diagnostic to the details of the ion distribution. In particular, the effectiveness of a planned 56 GHz gyrotron CTS diagnostic for TFTR is evaluated

  11. Energetic Nitrogen Ions within the Inner Magnetosphere of Saturn

    Science.gov (United States)

    Sittler, E. C.; Johnson, R. E.; Richardson, J. D.; Jurac, S.; Moore, M.; Cooper, J. F.; Mauk, B. H.; Smith, H. T.; Michael, M.; Paranicus, C.; Armstrong, T. P.; Tsurutani, B.; Connerney, J. E. P.

    2003-05-01

    Titan's interaction with Saturn's magnetosphere will result in the energetic ejection of atomic nitrogen atoms into Saturn's magnetosphere due to dissociation of N2 by electrons, ions, and UV photons. The ejection of N atoms into Saturn's magnetosphere will form a nitrogen torus around Saturn with mean density of about 4 atoms/cm3 with source strength of 4.5x1025 atoms/sec. These nitrogen atoms are ionized by photoionization, electron impact ionization and charge exchange reactions producing an N+ torus of 1-4 keV suprathermal ions centered on Titan's orbital position. We will show Voyager plasma observations that demonstrate presence of a suprathermal ion component within Saturn's outer magnetosphere. The Voyager LECP data also reported the presence of inward diffusing energetic ions from the outer magnetosphere of Saturn, which could have an N+ contribution. If so, when one conserves the first and second adiabatic invariant the N+ ions will have energies in excess of 100 keV at Dione's L shell and greater than 400 keV at Enceladus' L shell. Energetic charged particle radial diffusion coefficients are also used to constrain the model results. But, one must also consider the solar wind as another important source of keV ions, in the form of protons and alpha particles, for Saturn's outer magnetosphere. Initial estimates indicate that a solar wind source could dominate in the outer magnetosphere, but various required parameters for this estimate are highly uncertain and will have to await Cassini results for confirmation. We show that satellite sweeping and charged particle precipitation within the middle and outer magnetosphere will tend to enrich N+ ions relative to protons within Saturn's inner magnetosphere as they diffuse radially inward for radial diffusion coefficients that do not violate observations. Charge exchange reactions within the inner magnetosphere can be an important loss mechanism for O+ ions, but to a lesser degree for N+ ions. Initial LECP

  12. Internal Transport Barrier Driven by Redistribution of Energetic Ions

    International Nuclear Information System (INIS)

    Wong, K.L.; Heidbrink, W.W.; Ruskov, E.; Petty, C.C.; Greenfield, C.M.; Nazikian, R.; Budny, R.

    2004-01-01

    Alfven instabilities excited by energetic ions are used as a means to reduce the central magnetic shear in a tokamak via redistribution of energetic ions. When the central magnetic shear is low enough, ballooning modes become stable for any plasma pressure gradient and an internal transport barrier (ITB) with a steep pressure gradient can exist. This mechanism can sustain a steady-state ITB as demonstrated by experimental data from the DIII-D tokamak. It can also produce a shear in toroidal and poloidal plasma rotation. Possible application of this technique to use the energetic alpha particles for improvement of burning plasma performance is discussed

  13. Energetic ion driven Alfven eigenmodes in Large Helical Device plasmas with three-dimensional magnetic structure and their impact on energetic ion transport

    International Nuclear Information System (INIS)

    Toi, K; Yamamoto, S; Nakajima, N; Ohdachi, S; Sakakibara, S; Osakabe, M; Murakami, S; Watanabe, K Y; Goto, M; Kawahata, K; Kolesnichenko, Ya I; Masuzaki, S; Morita, S; Narihara, K; Narushima, Y; Takeiri, Y; Tanaka, K; Tokuzawa, T; Yamada, H; Yamada, I; Yamazaki, K

    2004-01-01

    In the Large Helical Device (LHD), energetic ion driven Alfven eigenmodes (AEs) and their impact on energetic ion transport have been studied. The magnetic configuration of the LHD is three-dimensional and has negative magnetic shear over a whole plasma radius in the low beta regime. These features introduce the characteristic structures of the shear Alfven spectrum. In particular, a core-localized type of toroidicity-induced AE (TAE) is most likely because the TAE gap frequency rapidly increases towards the plasma edge. Moreover, helicity-induced AEs (HAEs) can be generated through a toroidal mode coupling as well as poloidal one in the three-dimensional configuration. The following experimental results have been obtained in LHD plasmas heated by tangential neutral beam injection: (1) observation of core-localized TAEs having odd as well as even parity, (2) eigenmode transition of the core-localized TAE to global AEs (GAEs), which phenomenon is very similar to that in a reversed shear tokamak, (3) observation of HAEs of which the frequency is about eight times higher than the TAE gap frequency, (4) enhanced radial transport/loss of energetic ions caused by bursting TAEs in a relatively high beta regime, and (5) seed formation of internal transport barriers induced by TAE-induced energetic ion transport. These results will be important and interesting information for AE physics in toroidal plasmas

  14. Sawteeth stabilization by energetic trapped ions

    International Nuclear Information System (INIS)

    Samain, A.; Edery, D.; Garbet, X.; Roubin, J.P.

    1991-01-01

    The analysis of a possible stabilization of sawteeth by a population of energetic ions is performed by using the Lagrangian of the electromagnetic perturbation. It is shown that the trapped component of such a population has a small influence compared to that of the passing component. The stabilization threshold is calculated assuming a non linear regime in the q=1 resonant layer. The energetic population must create a stable tearing structure if the average curvature effect on thermal particles in the layer is small. However, this effect decreases the actual threshold

  15. Simulation study of energetic ion transport due to Alfven eigenmodes in LHD plasma

    International Nuclear Information System (INIS)

    Todo, Yasushi; Nakajima, Noriyoshi; Osakabe, Masaki; Yamamoto, Satoshi; Spong, Donald A.

    2008-01-01

    The creation of holes and clumps in an energetic ion energy spectrum associated with Alfven eigenmodes was examined using the neutral particle analyzer (NPA) on the LHD shot no.47645. The difference in slowing-down times between the holes and clumps suggested that the energetic ions were transported over 10% of the plasma minor radius. The spatial profile and frequency of the Alfven eigenmodes were analyzed with the AE3D code. The phase space structures of the energetic ions on the NPA line-of-sight were investigated with Poincare plots, where an oscillating Alfven eigenmode was employed for earth plot. The phase space regions trapped by the Alfven eigenmodes appeared as islands in the Poincare plots. The radial width of the islands corresponded to the transport distance of the energetic ions. Since island width depends on Alfven eigenmode amplitude, it was found that Alfven eigenmodes with amplitude δB r /B - 10 -3 transported energetic ions over 10% of the minor radius. (author)

  16. Apparatus and method for extracting power from energetic ions produced in nuclear fusion

    Science.gov (United States)

    Fisch, Nathaniel J.; Rax, Jean M.

    1994-01-01

    An apparatus and method of extracting power from energetic ions produced by nuclear fusion in a toroidal plasma to enhance respectively the toroidal plasma current and fusion reactivity. By injecting waves of predetermined frequency and phase traveling substantially in a selected poloidal direction within the plasma, the energetic ions become diffused in energy and space such that the energetic ions lose energy and amplify the waves. The amplified waves are further adapted to travel substantially in a selected toroidal direction to increase preferentially the energy of electrons traveling in one toroidal direction which, in turn, enhances or generates a toroidal plasma current. In an further adaptation, the amplified waves can be made to preferentially increase the energy of fuel ions within the plasma to enhance the fusion reactivity of the fuel ions. The described direct, or in situ, conversion of the energetic ion energy provides an efficient and economical means of delivering power to a fusion reactor.

  17. Average energetic ion flux variations associated with geomagnetic activity from EPIC/STICS on Geotail

    Science.gov (United States)

    Christon, S. P.; Gloeckler, G.; Eastman, T. E.; McEntire, R. W.; Roelef, E. C.; Lui, A. T. Y.; Williams, D. J.; Frank, L. A.; Paterson, W. R.; Kokubun, S.; hide

    1996-01-01

    The magnetotail ion flux measurements from the Geotail spacecraft are analyzed both with and without the application of selection criteria that identify the plasma regime in which an observation is obtained. The different results are compared with each other. The initial results on the changes of energetic ion flux and composition correlated to average substorm activity in different magnetotail plasma regimes are discussed. The energetic ions are measured using the energetic particles and ion composition (EPIC) experiment and the suprathermal ion composition spectrometer (STICS). The plasma, wave and field instruments of the Geotail satellite were used to identify the principle magnetotail plasma regimes of plasma sheet, lobe, and magnetospheric boundary layer, as well as the magnetosheath and solar wind. Energetic O and H ions were observed in all the plasma regimes.

  18. Study on Energetic Ions Behavior in Plasma Facing Materials at Lower Temperature

    International Nuclear Information System (INIS)

    Morimoto, Y.; Sugiyama, T.; Akahori, S.; Kodama, H.; Tega, E.; Sasaki, M.; Oyaidu, M.; Kimura, H.; Okuno, K.

    2003-01-01

    An apparatus equipped with X-ray Photoelectron Spectroscopy (XPS) and Thermal Desorption Spectroscopy (TDS) was constructed to study interactions of energetic hydrogen isotopes with plasma facing materials. It is a remarkable feature of the apparatus that energetic ion implantation is carried out at around 150K to study reactions of energetic ions with matrix by suppressing the reactions of thermalized ions. Using this apparatus, TDS experiments for pyrolytic graphite implanted with energetic D 2 ions at 173 and 373K were carried out. The experimental results suggest that the deuterium implanted was released through a four-step release processes, involving three D 2 and one CD x (x = 2, 3 and 4) desorption processes. Two deuterium and CD x desorption processes were observed in the temperature range from 700 to 1200 K. In addition, a new deuterium desorption process was observed for the deuterium-implanted sample at 173 K. This has never been observed for deuterium-implanted graphite implanted at temperatures higher than room temperature

  19. Magnetospheric Multiscale (MMS) Observations of Energetic Ion Response to Magnetotail Dipolarization Events

    Science.gov (United States)

    Cohen, I. J.; Mauk, B.; Anderson, B. J.; Sitnov, M. I.; Motoba, T.; Ohtani, S.; Gkioulidou, M.; Fuselier, S. A.; Giles, B. L.; Strangeway, R. J.; Torbert, R. B.; Burch, J. L.

    2017-12-01

    Observations from the Energetic Ion Spectrometer (EIS) instruments aboard MMS have shown angular (pitch, elevation, azimuthal) asymmetries of energetic (>10s of keV) ions corresponding to dipolarization events in the near-Earth and distant magnetotail. In particular, EIS distinguishes the species composition of these ions (protons, helium, oxygen) and reveals apparent species-based differences in their response. This study presents analysis of the dynamic injection and mass-dependent response of energetic ions that likely result from the kinetic response of the ions to the time-varying electric and magnetic fields associated with injection process. Analysis is focused on discriminating between truly kinetic responses to the dynamics and the features that arise from large gyro-radii particles in the vicinity of strong spatial gradients. The study will focus on EIS measurements and include supplementary data from the FIELDS, FPI, and HPCA instruments.

  20. Simulation study of energetic ion distribution during combined NBI and ICRF heating in LHD

    International Nuclear Information System (INIS)

    Murakami, S.; Fukuyama, A.; Kasilov, V.

    2006-01-01

    In the LHD, significant performances of ICRF heating (fundamental, minority heating regime) have been demonstrated and up to 500keV of energetic tail ions have been observed by fast neutral particle analysis (NPA). These measured results indicate a good property of energetic ion confinement in helical systems. From the 9th campaign of LHD experiment (FY2005) a new perpendicular NBI heating system (P<3MW) has been installed and an effective heating of perpendicularly injected beam ions by the higher harmonics ICRF heating is expected. ICRF heating generates highly energetic tail ions, which drift around the torus for a long time (typically on a collisional time scale). Thus, the behavior of these energetic ions is strongly affected by the characteristics of the drift motions, which depend on the magnetic field configuration. In particular, in a three-dimensional (3D) magnetic configuration, complicated drift motions of trapped particles would play an important role in the confinement of the energetic ions and the ICRF heating process. Therefore a global simulation of ICRF heating is necessary for the accurate modeling of the plasma heating process in a 3D magnetic configuration. In this paper we study the energetic ion distribution during combined NBI and 2nd harmonics ICRF heating in LHD using two global simulation codes: a full wave field solver TASK/WK and a drift kinetic equation solver GNET. GNET solves a linearized drift kinetic equation for energetic ions including complicated behavior of trapped particles in 5-D phase space. TASK/WM solves Maxwell's equation for RF wave electric field with complex frequency as a boundary value problem in the 3D magnetic configuration. (author)

  1. Effect of the helically-trapped energetic-ion-driven resistive interchange modes on energetic ion confinement in the Large Helical Device

    Science.gov (United States)

    Ogawa, K.; Isobe, M.; Kawase, H.; Nishitani, T.; Seki, R.; Osakabe, M.; LHD Experiment Group

    2018-04-01

    The effect of the helically-trapped energetic-ion-driven resistive interchange modes (EICs) on energetic ion confinement is studied in the Large Helical Device deuterium plasmas. Neutron diagnostics such as the neutron flux monitor and the vertical neutron camera (VNC) are used in order to measure neutrons mainly created by beam-plasma reactions. The line-integrated neutron profiles are obtained by VNC in magnetohydrodynamic-quiet plasma with various neutral beam (NB) injection patterns. The profiles are consistent with that expected by the beam ion density calculated using orbit-following simulations. Significant decreases of the total neutron emission rate (S n) and the neutron counting rate of the VNC (C n) in central cords are observed to be synchronized with EIC bursts with perpendicular-NB injection. The drop rates of both S n and C n increase with EIC amplitude and reach around 50%. The line-integrated neutron profiles before and after EIC burst show that in the central cords, C n decrease due to EIC burst whereas there is almost no change in the other cords. The experimental results suggests that the effect of EIC on helically-trapped beam ion is substantial, however the effect of passing beam ion is not significant.

  2. Effect of Neoclassical Transport Optimization on Energetic Ion Confinement in LHD

    International Nuclear Information System (INIS)

    Murakami, S.; Yamada, H.; Sasao, M.

    2004-01-01

    Confinement of energetic ions from neutral beam injection heating is investigated by changing the magnetic field configuration of the Large Helical Device from a classical heliotron configuration to an optimized neoclassical transport configuration to a level typical of ''advanced stellarators.'' The experimental results show the highest count rate of fast neutral particles not in the optimized configuration but in the inward-shifted one. The GNET simulation results show a relatively good agreement with the experimental results, and they also show a lower energy loss rate in the optimized configuration. This contradiction can be explained by the radial profile of the energetic ions. The relatively good agreement between experimental and simulation results suggest that ripple transport (neoclassical) dominates the energetic ion confinement and that the optimization process is effective in improving confinement in helical systems

  3. Scintillator Based Energetic Ion Loss Diagnostic for the National Spherical Torus Experiment

    International Nuclear Information System (INIS)

    Darrow, D.S.

    2007-01-01

    A scintillator based energetic ion loss detector has been built and installed on the National Spherical Torus Experiment (NSTX) to measure the loss of neutral beam ions. The detector is able to resolve the pitch angle and gyroradius of the lost energetic ions. It has a wide acceptance range in pitch angle and energy, and is able to resolve the full, one-half, and one-third energy components of the 80 keV D neutral beams up to the maximum toroidal magnetic field of NSTX. Multiple Faraday cups have been embedded behind the scintillator to allow easy absolute calibration of the diagnostic and to measure the energetic ion loss to several ranges of pitch angle with good time resolution. Several small, vacuum compatible lamps allow simple calibration of the scintillator position within the field of view of the diagnostic's video camera

  4. Scintillator Based Energetic Ion Loss Diagnostic for the National Spherical Torus Experiment

    Energy Technology Data Exchange (ETDEWEB)

    D.S. Darrow

    2007-07-02

    A scintillator based energetic ion loss detector has been built and installed on the National Spherical Torus Experiment (NSTX) to measure the loss of neutral beam ions. The detector is able to resolve the pitch angle and gyroradius of the lost energetic ions. It has a wide acceptance range in pitch angle and energy, and is able to resolve the full, one-half, and one-third energy components of the 80 keV D neutral beams up to the maximum toroidal magnetic field of NSTX. Multiple Faraday cups have been embedded behind the scintillator to allow easy absolute calibration of the diagnostic and to measure the energetic ion loss to several ranges of pitch angle with good time resolution. Several small, vacuum compatible lamps allow simple calibration of the scintillator position within the field of view of the diagnostic's video camera.

  5. On contribution of energetic and heavy ions to the plasma pressure: Storm Sept 27 - Oct 4, 2002

    Science.gov (United States)

    Kronberg, E. A.; Mouikis, C.; Kistler, L. M.; Dandouras, I. S.; Daly, P. W.; Welling, D. T.; Grigorenko, E. E.

    2015-12-01

    Contribution of the energetic ions (>> 40 keV) and of heavy ions into the total plasma pressure is often neglected. In this study we evaluate the contribution of these components for the storm observed from September 27 to October 4 in 2002. The thermal component of the pressure for the protons, helium and oxygen at 0--40 keV/q is measured by the Cluster/CIS/CODIF sensor. The contribution of the energetic ions at energies >> 40 keV is calculated from the Cluster/RAPID/IIMS observations. The results show that before the storm has initiated, the contribution of the energetic ions in to the total pressure is indeed negligible in the tail plasma sheet, less than ˜1%. However, with the storm development contribution of the energetic part becomes significant, up to ˜30%, towards the recovery phase and cannot be neglected. Heavy ions contribute to the 27% of the total pressure and half of them are energetic. The contribution of energetic ions to the pressure of the ring current (L≃5) is significant. The heavy ions play a dominant role in the plasma pressure, about 62% during the main phase of the magnetic storm. Half of them are energetic ions. The SWMF/BATS-R-US MHD model underestimates the contribution of the energetic and heavy ions in to the ion distribution in the magnetotail plasma sheet and the ring current. The ring current plasma pressure distorts the terrestrial internal magnetic field and defines magnetic storm. Therefore, it is essential to take in to account the contribution of the energetic and heavy ions.

  6. A comparison of energetic ions in the plasma depletion layer and the quasi-parallel magnetosheath

    Science.gov (United States)

    Fuselier, Stephen A.

    1994-01-01

    Energetic ion spectra measured by the Active Magnetospheric Particle Tracer Explorers/Charge Composition Explorer (AMPTE/CCE) downstream from the Earth's quasi-parallel bow shock (in the quasi-parallel magnetosheath) and in the plasma depletion layer are compared. In the latter region, energetic ions are from a single source, leakage of magnetospheric ions across the magnetopause and into the plasma depletion layer. In the former region, both the magnetospheric source and shock acceleration of the thermal solar wind population at the quasi-parallel shock can contribute to the energetic ion spectra. The relative strengths of these two energetic ion sources are determined through the comparison of spectra from the two regions. It is found that magnetospheric leakage can provide an upper limit of 35% of the total energetic H(+) population in the quasi-parallel magnetosheath near the magnetopause in the energy range from approximately 10 to approximately 80 keV/e and substantially less than this limit for the energetic He(2+) population. The rest of the energetic H(+) population and nearly all of the energetic He(2+) population are accelerated out of the thermal solar wind population through shock acceleration processes. By comparing the energetic and thermal He(2+) and H(+) populations in the quasi-parallel magnetosheath, it is found that the quasi-parallel bow shock is 2 to 3 times more efficient at accelerating He(2+) than H(+). This result is consistent with previous estimates from shock acceleration theory and simulati ons.

  7. MHD-induced Energetic Ion Loss during H-mode Discharges in the National Spherical Torus Experiment (NSTX)

    International Nuclear Information System (INIS)

    Medley, S.S.; Gorelenkov, N.N.; Andre, R.; Bell, R.E.; Darrow, D.S.; Fredrickson, E.D.; Kaye, S.M.; LeBlanc, B.P.; Roquemore, A.L.

    2004-01-01

    MHD-induced energetic ion loss in neutral-beam-heated H-mode [high-confinement mode] discharges in NSTX [National Spherical Torus Experiment] is discussed. A rich variety of energetic ion behavior resulting from magnetohydrodynamic (MHD) activity is observed in the NSTX using a horizontally scanning Neutral Particle Analyzer (NPA) whose sightline views across the three co-injected neutral beams. For example, onset of an n = 2 mode leads to relatively slow decay of the energetic ion population (E ∼ 10-100 keV) and consequently the neutron yield. The effect of reconnection events, sawteeth, and bounce fishbones differs from that observed for low-n, low-frequency, tearing-type MHD modes. In this case, prompt loss of the energetic ion population occurs on a time scale of less than or equal to 1 ms and a precipitous drop in the neutron yield occurs. This paper focuses on MHD-induced ion loss during H-mode operation in NSTX. After H-mode onset, the NPA charge-exchange spectrum usually exhibits a significant loss of energetic ions only for E > E(sub)b/2 where E(sub)b is the beam injection energy. The magnitude of the energetic ion loss was observed to decrease with increasing tangency radius, R(sub)tan, of the NPA sightline, increasing toroidal field, B(sub)T, and increasing neutral-beam injection energy, E(sub)b. TRANSP modeling suggests that MHD-induced ion loss is enhanced during H-mode operation due to an evolution of the q and beam deposition profiles that feeds both passing and trapped ions into the region of low-n MHD activity. ORBIT code analysis of particle interaction with a model magnetic perturbation supported the energy selectivity of the MHD-induced loss observed in the NPA measurements. Transport analysis with the TRANSP code using a fast-ion diffusion tool to emulate the observed MHD-induced energetic ion loss showed significant modifications of the neutral- beam heating as well as the power balance, thermal diffusivities, energy confinement times, and

  8. MHD-induced Energetic Ion Loss during H-mode Discharges in the National Spherical Torus Experiment (NSTX)

    Energy Technology Data Exchange (ETDEWEB)

    S.S. Medley; N.N. Gorelenkov; R. Andre; R.E. Bell; D.S. Darrow; E.D. Fredrickson; S.M. Kaye; B.P. LeBlanc; A.L. Roquemore; and the NSTX Team

    2004-03-15

    MHD-induced energetic ion loss in neutral-beam-heated H-mode [high-confinement mode] discharges in NSTX [National Spherical Torus Experiment] is discussed. A rich variety of energetic ion behavior resulting from magnetohydrodynamic (MHD) activity is observed in the NSTX using a horizontally scanning Neutral Particle Analyzer (NPA) whose sightline views across the three co-injected neutral beams. For example, onset of an n = 2 mode leads to relatively slow decay of the energetic ion population (E {approx} 10-100 keV) and consequently the neutron yield. The effect of reconnection events, sawteeth, and bounce fishbones differs from that observed for low-n, low-frequency, tearing-type MHD modes. In this case, prompt loss of the energetic ion population occurs on a time scale of less than or equal to 1 ms and a precipitous drop in the neutron yield occurs. This paper focuses on MHD-induced ion loss during H-mode operation in NSTX. After H-mode onset, the NPA charge-exchange spectrum usually exhibits a significant loss of energetic ions only for E > E(sub)b/2 where E(sub)b is the beam injection energy. The magnitude of the energetic ion loss was observed to decrease with increasing tangency radius, R(sub)tan, of the NPA sightline, increasing toroidal field, B(sub)T, and increasing neutral-beam injection energy, E(sub)b. TRANSP modeling suggests that MHD-induced ion loss is enhanced during H-mode operation due to an evolution of the q and beam deposition profiles that feeds both passing and trapped ions into the region of low-n MHD activity. ORBIT code analysis of particle interaction with a model magnetic perturbation supported the energy selectivity of the MHD-induced loss observed in the NPA measurements. Transport analysis with the TRANSP code using a fast-ion diffusion tool to emulate the observed MHD-induced energetic ion loss showed significant modifications of the neutral- beam heating as well as the power balance, thermal diffusivities, energy confinement times

  9. Effective charge of energetic ions in metals

    International Nuclear Information System (INIS)

    Kitagawa, M.; Brandt, W.

    1983-01-01

    The effective charge of energetic ion, as derived from stopping power of metals, is calculated by use of a dielectronic-response function method. The electronic distribution in the ion is described through the variational principle in a statistical approximation. The dependences of effective charge on the ion velocity, atomic number and r/sub s/-value of metal are derived at the low-velocity region. The effective charge becomes larger than the real charge of ion due to the close collisions. We obtain the quasi-universal equation of the fractional effective electron number of ion as a function of the ratio between the ionic size and the minimum distance approach. The comparsion between theoretical and experimental results of the effective charge is performed for the cases of N ion into Au, C and Al. We also discuss the equipartition rule of partially ionized ion at the high-velocity region

  10. Time-of-flight secondary ion mass spectrometry with energetic cluster ion impact ionization for highly sensitive chemical structure characterization

    Energy Technology Data Exchange (ETDEWEB)

    Hirata, K., E-mail: k.hirata@aist.go.jp [National Metrology Institute of Japan, National Institute of Advanced Industrial Science and Technology (AIST), 1-1-1 Higashi, Tsukuba, Ibaraki 305-8565 (Japan); Saitoh, Y.; Chiba, A.; Yamada, K.; Narumi, K. [Takasaki Advanced Radiation Research Institute (TARRI), Japan Atomic Energy Agency (JAEA), Takasaki, Gumma 370-1292 (Japan)

    2013-11-01

    Energetic cluster ions with energies of the order of sub MeV or greater were applied to time-of-flight (TOF) secondary ion (SI) mass spectrometry. This gave various advantages including enhancement of SIs required for chemical structure characterization and prevention of charging effects in SI mass spectra for organic targets. We report some characteristic features of TOF SI mass spectrometry using energetic cluster ion impact ionization and discuss two future applications of it.

  11. Ring current instabilities excited by the energetic oxygen ions

    International Nuclear Information System (INIS)

    Kakad, A. P.; Singh, S. V.; Lakhina, G. S.

    2007-01-01

    The ring current instabilities driven by the energetic oxygen ions are investigated during the magnetic storm. The electrons and protons are considered to have Maxwellian distributions, while energetic oxygen ions are having loss-cone distribution. Dispersion relation for the quasielectrostatic modes with frequencies ω>ω cp (proton cyclotron frequency) and propagating obliquely to the magnetic field is obtained. Dispersion relation is studied numerically for the storm time ring current parameters and it is found that these instabilities are most prominent during intense storms when the oxygen ions become the dominant constituents of the ring current plasma. For some typical storm-time ring current parameters, these modes can produce quasielectrostatic noise in the range of 17-220 Hz, thus providing a possible explanation of the electrostatic noise observed at the inner boundary of the ring current during magnetic storms. Further, these modes can attain saturation electric fields of the order of 100-500 μV/m, and therefore, are expected to scatter O + ions into the loss-cone giving rise to their precipitation into the atmosphere, thus contributing to the ring current decay

  12. Orbit following calculation of energetic ions for design of ferritic insertion on JT-60U

    International Nuclear Information System (INIS)

    Shinohara, K.; Suzuki, Y.; Sakurai, S.; Masaki, K.; Fujita, T.; Miura, Y.

    2006-01-01

    The design work for ferritic inserts is described from the viewpoint of the behavior of energetic ions. The confinement of energetic ions and the absence of the unfavorable heat flux on the first wall was assessed by using the Fully three Dimensional magnetic field OFMC code, which was developed for a ferrite insert program in JFT-2M. In the final design, the confinement of energetic ions is improved by a factor of about 1.3 times in a particular large volume plasma with Bt 0 = 1.9T. (author)

  13. Extraction of cobalt ion from textile using a complexing macromolecular surfactant in supercritical carbon dioxide

    International Nuclear Information System (INIS)

    Chirat, Mathieu; Ribaut, Tiphaine; Clerc, Sebastien; Lacroix-Desmazes, Patrick; Charton, Frederic; Fournel, Bruno

    2013-01-01

    Cobalt ion under the form of cobalt nitrate is removed from a textile lab coat using supercritical carbon dioxide extraction. The process involves a macromolecular additive of well-defined architecture, acting both as a surfactant and a complexing agent. The extraction efficiency of cobalt reaches 66% when using a poly(1,1,2,2-tetrahydroperfluoro-decyl-acrylate-co-vinyl-benzylphosphonic diacid) gradient copolymer in the presence of water at 160 bar and 40 C. The synergy of the two additives, namely the copolymer and water which are useless if used separately, is pointed out. The potential of the supercritical carbon dioxide process using complexing macromolecular surfactant lies in the ability to modulate the complexing unit as a function of the metal as well as the architecture of the surface-active agent for applications ranging for instance from nuclear decontamination to the recovery of strategic metals. (authors)

  14. Observations of interplanetary energetic ion enhancements near magnetic sector boundaries

    International Nuclear Information System (INIS)

    Briggs, P.R.; Armstrong, T.P.

    1984-01-01

    We have examined all energetic medium nuclei (carbon, nitrogen, and oxygen) flux increases observed all the satellites IMP 7 and IMP 8 at 1 AU during Bartels rotations 1906-1974. After removing flare-related increases, the remaining 14 ''events'' were compared to interplanetary magnetic field and solar wind parameters. We have discovered a class of flux enhancements in which the ion increases occur close to the onset of magnetic sector boundary crossings. We interpret this observation as a facilitated access to 1 AU of energetic ions from the corona or chromopshere via the magnetic sector structure. It appears that this access is more significant for medium than for lighter nuclei, ''suggesting a possible charge- or rigidity-dependent transport mechanism

  15. Effect of energetic ion loss on ICRF heating efficiency and energy confinement time in heliotrons

    International Nuclear Information System (INIS)

    Murakami, S.; Nakajima, N.; Okamoto, M.; Nuehrenberg, J.

    1999-06-01

    ICRF heating efficiency and the global energy confinement time during ICRF heating are investigated including the effect of energetic ion loss in heliotrons. The approximate formula of ICRF heating efficiency is derived using the results based on Monte Carlo simulations. The global energy confinement time including energetic ion effect can be expressed in terms of ICRF heating power, plasma density, and magnetic field strength in heliotrons. Our results in the CHS plasma show the systematic decrement of the global energy confinement time due to the energetic ion loss from the assumed energy confinement scaling law, which is consistent with the experimental observations. Also we apply our model to the ICRF minority heating in the LHD plasma in two cases of typical magnetic configurations. The clear increment of the global energy confinement time due to the stored energy of energetic tail ions is obtained in the 'orbit improved' configuration, while the decrement is observed in the 'standard' configuration. (author)

  16. Effect of energetic ion loss on ICRF heating efficiency and energy confinement time in heliotrons

    International Nuclear Information System (INIS)

    Murakami, S.; Nakajima, N.; Okamoto, M.; Nuehrenberg, J.

    1999-01-01

    The ICRF heating efficiency and the global energy confinement time during ICRF heating are investigated, including the effect of energetic ion loss in heliotrons. The approximate formula of ICRF heating efficiency is derived using results based on Monte Carlo simulations (Murakami, S., et al., Fusion Eng. Des. 26 (1995) 209). The global energy confinement time including the energetic ion effect can be expressed in heliotrons in terms of ICRF heating power, plasma density and magnetic field strength. Results in plasmas at CHS show a systematic decrease of the global energy confinement time due to energetic ion loss from the assumed energy confinement scaling law, which is consistent with the experimental observations. The model is also applied to ICRF minority heating in LHD plasmas in two cases of typical magnetic configurations. A clear increase of the global energy confinement time due to the stored energy of energetic tail ions is obtained in the 'orbit improved' configuration, while a decrease is observed in the 'standard' configuration. (author)

  17. Mechanisms of Stochastic Diffusion of Energetic Ions in Spherical Tori

    Energy Technology Data Exchange (ETDEWEB)

    Ya.I. Kolesnichenko; R.B. White; Yu.V. Yakovenko

    2001-01-18

    Stochastic diffusion of the energetic ions in spherical tori is considered. The following issues are addressed: (I) Goldston-White-Boozer diffusion in a rippled field; (ii) cyclotron-resonance-induced diffusion caused by the ripple; (iii) effects of non-conservation of the magnetic moment in an axisymmetric field. It is found that the stochastic diffusion in spherical tori with a weak magnetic field has a number of peculiarities in comparison with conventional tokamaks; in particular, it is characterized by an increased role of mechanisms associated with non-conservation of the particle magnetic moment. It is concluded that in current experiments on National Spherical Torus eXperiment (NSTX) the stochastic diffusion does not have a considerable influence on the confinement of energetic ions.

  18. Global MHD modes excited by energetic ions in heliotron/torsatron plasmas

    International Nuclear Information System (INIS)

    Toi, K.; Takechi, M.; Takagi, S.

    1999-01-01

    In the CHS heliotron/torsatron, fishbone instabilities (FBs) and toroidal Alfven eigenmodes(TAEs) are observed for the first time, in NBI heated plasmas where small beam driven current is induced. Pulsed increase in energetic ion loss flux is detected by an escaping ion probe during the m=3/n=2 FBs(m,n:poloidal and toroidal mode numbers). The sawtooth crash is often induced by the m=2/n=1 FBs. The current driven internal kink mode and pressure driven interchange modes are thought to be relevant MHD instabilities to FBs. TAEs with n=1 and n=2 are identified, and localized near the plasma core region where fairly low magnetic shear would be realized by the small net plasma current. So far, the observed TAEs do not lead to enhanced loss of energetic ions because of low magnetic fluctuation level. (author)

  19. Global MHD modes excited by energetic ions in heliotron/torsatron plasmas

    International Nuclear Information System (INIS)

    Toi, K.; Takechi, M.; Takagi, S.

    2001-01-01

    In the CHS heliotron/torsatron, fishbone instabilities (FBs) and toroidal Alfven eigenmodes (TAEs) are observed for the first time, in NBI heated plasmas where small beam driven current is induced. Pulsed increase in energetic ion loss flux is detected by an escaping ion probe during the m=3/n=2 FBs (m,n: poloidal and toroidal mode numbers). The sawtooth crash is often induced by the m=2/n=1 FBs. The current driven internal kink mode and pressure driven interchange modes are thought to be relevant MHD instabilities to FBs. TAEs with n=1 and n=2 are identified, and localized near the plasma core region where fairly low magnetic shear would be realized by the small net plasma current. So far, the observed TAEs do not lead to enhanced loss of energetic ions because of low magnetic fluctuation level. (author)

  20. Transport of energetic ions by low-n magnetic perturbations

    International Nuclear Information System (INIS)

    Mynick, H.E.

    1992-10-01

    The stochastic transport of MeV ions induced by low-n magnetic perturbations is studied, focussing chiefly on the stochastic mechanism operative for passing particles in low frequency perturbations. Beginning with a single-harmonic form for the perturbing field, it iii first shown numerically and analytically that the stochastic threshold of energetic particles can be much lower than that of the magnetic field, contrary to earlier expectations, so that MHD perturbations could cause appreciable loss of energetic ions without destroying the bulk confinement. The analytic theory is then extended in a number of directions, to darity the relation of the present stochaistic mechanism to instances already found, to allow for more complex perturbations, and to consider the more general relationship between the stochasticity of magnetic fields, and that of particles of differing energies (and pitch angles) moving in those fields. It is shown that the stochastic threshold is in general a nonmonotonic function of energy, whose form can to some extent be tailored to achieve desired goals (e.g., burn control or ash removal) by a judicious choice of the perturbation. Illustrative perturbations are exhibited which are stochastic for low but not for high-energy ions, for high but not for low-energy ions, and for intermediate-energy ions, but not for low or high energy. The second possibility is the behavior needed for burn control; the third provides a possible mechanism for ash removal

  1. Composition of heavy ions in solar energetic particle events

    International Nuclear Information System (INIS)

    Fan, C.Y.; Gloeckler, G.

    1983-01-01

    The elemental, charge state, and isotopic composition of approximately 1 to 20 MeV per nucleon ions in solar energetic particle (SEP) events was determined and current understanding of the nature of solar and interplanetary processes which may explain the observations are outlined. The composition within individual SEP events may vary both with time and energy, and will in general be different from that in other SEP events. Average values of relative abundances measured in a large number of SEP events, however are found to be roughly energy independent in the approximately 1 to approximately 20 MeV per nucleon range, and show a systematic deviation from photospheric abundances which seem to be organized in terms of the first ionization potential of the ion. Direct measurements of the charge states of SEPs have revealed the surprisingly common presence of energetic He(+) along with heavy ions with typical coronal ionization states. High resolution measurements of isotopic abundance ratios in a small number of SEP events show these to be consistent with the universal composition except for the puzzling overabundance of the SEP Ne-22 relative to this isotopes ratio in the solar wind

  2. The GOES-16 Energetic Heavy Ion Sensor (EHIS) Ion Composition and Flux Measurements

    Science.gov (United States)

    Connell, J. J.; Lopate, C.

    2017-12-01

    The Energetic Heavy Ion Sensor (EHIS) was built by the University of New Hampshire, subcontracted to Assurance Technology Corporation, as part of the Space Environmental In-Situ Suite (SEISS) on the new GOES-16 satellite (formerly GOES-R) in Geostationary orbit. EHIS measures energetic ions over the range 10-200 MeV for protons, and energy ranges for heavy ions corresponding to the same stopping range (e.g., 19-207 MeV/u for carbon and 38-488 MeV/u for iron). EHIS uses the Angle Detecting Inclined Sensors (ADIS) technique to provide single-element charge resolution. Though on an operational mission for Space Weather monitoring, EHIS can thus provide a new source of high quality Solar Particle Event (SPE) data for science studies. With a high rate of on-board processing ( 2000 events/s), EHIS will provide exceptional statistics for ion composition measurements in large SPEs. For the GOES Level 1-B and Level 2 data products, heavy ions are distinguished in EHIS using pulse-height analysis with on-board processing producing charge histograms for five energy bands. Fits to these data are normalized to priority rate data on the ground. The instrumental cadence for histograms is 1 minute and the primary Level 1-B heavy ion data products are 1-minute and 5-minute averages. We discuss the preliminary EHIS heavy ion data results which show elemental peaks from H to Fe, with peaks for the isotopes D and 3He. (GOES-16 was launched in 19 November, 2016 and data has, though July 2017, been dominated by Galactic Cosmic Rays.) The EHIS instrument development project was funded by NASA under contract NNG06HX01C.

  3. Using support vector machines to improve elemental ion identification in macromolecular crystal structures

    Energy Technology Data Exchange (ETDEWEB)

    Morshed, Nader [University of California, Berkeley, CA 94720 (United States); Lawrence Berkeley National Laboratory, Berkeley, CA 94720 (United States); Echols, Nathaniel, E-mail: nechols@lbl.gov [Lawrence Berkeley National Laboratory, Berkeley, CA 94720 (United States); Adams, Paul D., E-mail: nechols@lbl.gov [Lawrence Berkeley National Laboratory, Berkeley, CA 94720 (United States); University of California, Berkeley, CA 94720 (United States)

    2015-05-01

    A method to automatically identify possible elemental ions in X-ray crystal structures has been extended to use support vector machine (SVM) classifiers trained on selected structures in the PDB, with significantly improved sensitivity over manually encoded heuristics. In the process of macromolecular model building, crystallographers must examine electron density for isolated atoms and differentiate sites containing structured solvent molecules from those containing elemental ions. This task requires specific knowledge of metal-binding chemistry and scattering properties and is prone to error. A method has previously been described to identify ions based on manually chosen criteria for a number of elements. Here, the use of support vector machines (SVMs) to automatically classify isolated atoms as either solvent or one of various ions is described. Two data sets of protein crystal structures, one containing manually curated structures deposited with anomalous diffraction data and another with automatically filtered, high-resolution structures, were constructed. On the manually curated data set, an SVM classifier was able to distinguish calcium from manganese, zinc, iron and nickel, as well as all five of these ions from water molecules, with a high degree of accuracy. Additionally, SVMs trained on the automatically curated set of high-resolution structures were able to successfully classify most common elemental ions in an independent validation test set. This method is readily extensible to other elemental ions and can also be used in conjunction with previous methods based on a priori expectations of the chemical environment and X-ray scattering.

  4. Energetic atomic and molecular ions of ionospheric origin observed in distant magnetotail flow-reversal events

    Science.gov (United States)

    Christon, S. P.; Gloeckler, G.; Williams, D. J.; Mukai, T.; Mcentire, R. W.; Jacquey, C.; Angelopoulos, V.; Lui, A. T. Y.; Kokubun, S.; Fairfield, D. H.

    1994-01-01

    Energetic atomic (O(+1) and N(+1)) and molecular (O2(+1), NO(+1), and N2(+1)) ions of ionospheric origin were observed in Earth's magnetotail at X approximately -146 R(sub E) during two plasma sheet sunward/tailward flow-reversal events measured by instruments on the GEOTAIL spacecraft. These events were associated with concurrent ground-measured geomagnetic disturbance intensification at auroral-and mid-latitudes (Kp = 7(-)). Energetic ions in the sunward-component and tailward flows were from both the solar wind and ionosphere. Plasma and energetic ions participated in the flows. During tailward flow, ionospheric origin ion abundance ratios at approximately 200-900 km/s in the rest frame were N(+1)/O(+1) = approximately 25-30% and ((O2(+1), NO(+1), and N2(+1))/O(+1) = approximately 1-2%. We argue that tailward flow most likely initiated approximately 80-100 R(sub E) tailward of Earth and molecular ions were in the plasma sheet prior to geomagnetic intensification onset.

  5. Use of energetic ion beams in materials synthesis and processing

    International Nuclear Information System (INIS)

    Appleton, B.R.

    1992-01-01

    A brief review of the use energetic ion beams and related techniques for the synthesis, processing, and characterization of materials is presented. Selected opportunity areas are emphasized with examples, and references are provided for more extensive coverage. (author)

  6. A new identification method for energetic ion ΔE-E telescopes

    International Nuclear Information System (INIS)

    Martin, Cesar; Bronchalo, Enrique; Medina, Jose

    2007-01-01

    A new ion identification method for ΔE-E telescopes is presented. The method works by counting data points under ΔE(E) curves on ΔE-E diagrams. These curves are obtained by simulating the telescope response to a flux of energetic ions. The method is checked against three published methods applied to several experimental data sets

  7. A new identification method for energetic ion {delta}E-E telescopes

    Energy Technology Data Exchange (ETDEWEB)

    Martin, Cesar [Departamento de Fisica, Universidad de Alcala, 28871 Alcala de Henares, Madrid (Spain); Institut fuer Experimentelle und Angewandte Physik, Christian-Albrechts, Universitaet zu Kiel, 24118 Kiel (Germany); Bronchalo, Enrique [Departamento de Fisica, Universidad de Alcala, 28871 Alcala de Henares, Madrid (Spain); Departamento de Fisica y Arquitectura de Computadores, Universidad Miguel Hernandez, Avda. Universidad s/n, 03202 Elche, Alicante (Spain)], E-mail: ebronchalo@umh.es; Medina, Jose [Departamento de Fisica, Universidad de Alcala, 28871 Alcala de Henares, Madrid (Spain)

    2007-11-21

    A new ion identification method for {delta}E-E telescopes is presented. The method works by counting data points under {delta}E(E) curves on {delta}E-E diagrams. These curves are obtained by simulating the telescope response to a flux of energetic ions. The method is checked against three published methods applied to several experimental data sets.

  8. Control of magnetohydrodynamic stability by phase space engineering of energetic ions in tokamak plasmas.

    Science.gov (United States)

    Graves, J P; Chapman, I T; Coda, S; Lennholm, M; Albergante, M; Jucker, M

    2012-01-10

    Virtually collisionless magnetic mirror-trapped energetic ion populations often partially stabilize internally driven magnetohydrodynamic disturbances in the magnetosphere and in toroidal laboratory plasma devices such as the tokamak. This results in less frequent but dangerously enlarged plasma reorganization. Unique to the toroidal magnetic configuration are confined 'circulating' energetic particles that are not mirror trapped. Here we show that a newly discovered effect from hybrid kinetic-magnetohydrodynamic theory has been exploited in sophisticated phase space engineering techniques for controlling stability in the tokamak. These theoretical predictions have been confirmed, and the technique successfully applied in the Joint European Torus. Manipulation of auxiliary ion heating systems can create an asymmetry in the distribution of energetic circulating ions in the velocity orientated along magnetic field lines. We show the first experiments in which large sawtooth collapses have been controlled by this technique, and neoclassical tearing modes avoided, in high-performance reactor-relevant plasmas.

  9. Energetic ion loss detector on the Alcator C-Mod tokamak.

    Science.gov (United States)

    Pace, D C; Granetz, R S; Vieira, R; Bader, A; Bosco, J; Darrow, D S; Fiore, C; Irby, J; Parker, R R; Parkin, W; Reinke, M L; Terry, J L; Wolfe, S M; Wukitch, S J; Zweben, S J

    2012-07-01

    A scintillator-based energetic ion loss detector has been successfully commissioned on the Alcator C-Mod tokamak. This probe is located just below the outer midplane, where it captures ions of energies up to 2 MeV resulting from ion cyclotron resonance heating. After passing through a collimating aperture, ions impact different regions of the scintillator according to their gyroradius (energy) and pitch angle. The probe geometry and installation location are determined based on modeling of expected lost ions. The resulting probe is compact and resembles a standard plasma facing tile. Four separate fiber optic cables view different regions of the scintillator to provide phase space resolution. Evolving loss levels are measured during ion cyclotron resonance heating, including variation dependent upon individual antennae.

  10. The ion environment near Europa and its role in surface energetics

    Science.gov (United States)

    Paranicas, C.; Ratliff, J. M.; Mauk, B. H.; Cohen, C.; Johnson, R. E.

    2002-03-01

    This paper gives the composition, energy spectra, and time variability of energetic ions measured just upstream of Europa. From 100 keV to 100 MeV, ion intensities vary by less than a factor of ~5 among Europa passes considered between 1997 and 2000. We use the data to estimate the radiation dose rate into Europa's surface for depths 0.01 mm - 1 m. We find that in a critical fraction of the upper layer on Europa's trailing hemisphere, energetic electrons are the principal agent for radiolysis, and their bremsstrahlung photon products, not included in previous studies, dominate the dose below about 1 m. Because ion bombardment is more uniform across Europa's surface, the radiation dose on the leading hemisphere is dominated by the proton flux. Differences exist between this calculation and published doses based on the E4 wake pass. For instance, proton doses presented here are much greater below 1 mm.

  11. Experimental evidence of energetic neutrals production in an ion diode

    Energy Technology Data Exchange (ETDEWEB)

    Pushkarev, A.I., E-mail: aipush@mail.ru; Isakova, Y.I.; Khaylov, I.P.

    2015-01-15

    The paper presents several experimental proofs of the formation of energetic charge-exchange neutrals in a self-magnetically insulated ion diode with a graphite cathode. The energetic neutrals are thought to be produced as a result of charge exchange process between accelerated ions and stationary neutral molecules. The experiments have been carried out using both a diode with externally applied magnetic insulation (single-pulse mode: 100 ns, 250–300 kV) and a diode with self-magnetic insulation (double-pulse mode: 300–500 ns, 100–150 kV (negative pulse); 120 ns, 250–300 kV (positive pulse)). The motivation for looking at the neutral component of the ion beam came when we compared two independent methods to measure the energy density of the beam. A quantitative comparison of infrared measurements with signals from Faraday cups and diode voltage was made to assess the presence of neutral atoms in the ion beam. As another proof of charge-exchange effects in ion diode we present the results of statistical analysis of diode performance. It was found that the shot-to shot variation of the energy density in a set of 50–100 shots does not exceed 11%, whilst the same variation for ion current density was 20–30%; suggesting the presence of neutrals in the beam. Moreover, the pressure in the zone of ion beam energy dissipation exceeds the results stated in cited references. The difference between our experimental data and results stated by other authors we attribute to the presence of a low-energy charge-exchange neutral component in the ion beam.

  12. Composition of heavy ions in solar energetic particle events

    International Nuclear Information System (INIS)

    Fan, C.Y.; Gloeckler, G.

    1983-01-01

    Recent advances in determining the elemental, charge state, and isotopic composition of approximatelt 1 to 20 MeV per nucleon ions in solar energetic particle (SEP) events and outline our current understanding of the nature of solar and interplanetary processes which may explain the observations. Average values of relative abundances measured in a large number of SEP events were found to be roughly energy independent in the approx. 1 to approx. 20 MeV per nucleon range, and showed a systematic deviation from photospheric abundances which seems to be organized in terms of the first ionization potential of the ion. Direct measurements of the charge states of SEPs revealed the surprisingly common presence of energetic He(+) along with heavy ion with typically coronal ionization states. High resolution measurements of isotopic abundance ratios in a small number of SEP events showed these to be consistent with the universal composition except for the puzzling overabundance of the SEP(22)Ne/(20)Ne relative to this isotopes ratio in the solar wind. The broad spectrum of observed elemental abundance variations, which in their extreme result in composition anomalies characteristic of (3)He rich, heavy ion rich and carbon poor SEP events, along with direct measurements of the ionization states of SEPs provided essential information on the physical characteristics of, and conditions in the source regions, as well as important constraints to possible models for SEP production

  13. Measurement of electron emission due to energetic ion bombardment in plasma source ion implantation

    Science.gov (United States)

    Shamim, M. M.; Scheuer, J. T.; Fetherston, R. P.; Conrad, J. R.

    1991-11-01

    An experimental procedure has been developed to measure electron emission due to energetic ion bombardment during plasma source ion implantation. Spherical targets of copper, stainless steel, graphite, titanium alloy, and aluminum alloy were biased negatively to 20, 30, and 40 kV in argon and nitrogen plasmas. A Langmuir probe was used to detect the propagating sheath edge and a Rogowski transformer was used to measure the current to the target. The measurements of electron emission coefficients compare well with those measured under similar conditions.

  14. Solar wind contribution to the average population of energetic He+ and He++ ions in the Earth's magnetosphere

    Directory of Open Access Journals (Sweden)

    G. Kremser

    1994-01-01

    Full Text Available Measurements with the ion charge-energy-mass spectrometer CHEM on the AMPTE/CCE spacecraft were used to investigate the origin of energetic He+ and He++ ions observed in the equatorial plane at 3 ≤ L ≤ 9. Special emphasis was laid on the dependence of long-term average distributions on magnetic local time (MLT and the geomagnetic activity index Kp. The observations are described in terms of the phase space densities f1 (for He+ and f2 (for He++. They confirm preliminary results from a previous study: f1 is independent of MLT, whereas f2 is much larger on the nightside than on the dayside. They show, furthermore, that f1 increases slightly with Kp on intermediate drift shells, but decreases on high drift shells (L ≥ 7. f2 increases with Kp on all drift shells outside the premidnight sector. Within this sector a decrease is observed on high drift shells. A simple ion tracing code was developed to determine how and from where the ions move into the region of observations. It provides ion trajectories as a function of the ion charge, the magnetic moment and Kp. The ion tracing enables a distinction between regions of closed drift orbits (ring current and open convection trajectories (plasma sheet. It also indicates how the outer part of the observation region is connected to different parts of the more distant plasma sheet. Observations and tracing show that He++ ions are effectively transported from the plasma sheet on convection trajectories. Their distribution in the observation region corresponds to the distribution of solar wind ions in the plasma sheet. Thus, energetic He++ ions most likely originate in the solar wind. On the other hand, the plasma sheet is not an important source of energetic He+ ions. Convection trajectories more likely constitute a sink for He+ ions, which may diffuse onto them from closed drift orbits and then get lost through the magnetopause. An ionospheric origin of energetic He+ ions is unlikely as well, since

  15. Phenomena accompanying gradient-B drift injection of energetic ions into Tokamak plasmas

    International Nuclear Information System (INIS)

    Goldston, R.J.; Jassby, D.L.

    1976-01-01

    The application of vertically asymmetric toroidal-field ripple, in order to permit the gradient B-drift injection and subsequent capture of energetic ions, results in a new radial diffusion of banana orbits. The nearly mono-kinetic velocity distribution of gradient B-drifting ions in the outer plasma region represents a large source of free energy; and the nonambipolar inward drift of these ions modifies the radial electric field

  16. Energetic ion beam in the earth's magnetotail lobe

    International Nuclear Information System (INIS)

    Lui, A.T.Y.; Krimigis, S.M.

    1983-01-01

    Occurrence of a prominent peak in the ion energy spectrum at energies of 0.1 to 0.7 MeV is observed by the IMP-8 spacecraft during an energetic particle burst in a plasma ''dropout'' interval at about 37 R/sub e/ in the earth's magnetotail. This unusual characteristic in the spectrum is detected for about 2 minutes. By fitting the observed ion spectra to a drifting Kappa distribution, it is found that the ion population can be described as a hot beam with number densities 4 x 10 -7 to 5 x 10 -4 cm -3 and temperatures 15 to 45 keV, jetting tailward at speeds of 3500 to 7000 km/s. The energy flux density associated with the beam can be as high as 8 x 10 -2 ergs cm -2 sec -1

  17. Solar wind heavy ions from energetic coronal events

    International Nuclear Information System (INIS)

    Bame, S.J.

    1978-01-01

    Ions heavier than those of He can be resolved in the solar wind with electrostatic E/q analyzers when the local thermal temperatures are low. Ordinarily this condition prevails in the low speed solar wind found between high speed streams, i.e. the interstream, IS, solar wind. Various ions of O, Si and Fe are resolved in IS heavy ion spectra. Relative ion peak intensities indicate that the O ionization state is established in the IS coronal source regions at approx. 2.1 x 10 6 K while the state of Fe is frozen in at approx. 1.5 x 10 6 K farther out. Occasionally, anomalous spectra are observed in which the usually third most prominent ion peak, O 8+ , is depressed as are the Fe peaks ranging from Fe 12+ to Fe 7+ . A prominent peak in the usual Si 8+ position of IS spectra is self-consistently shown to be Fe 16+ . These features demonstrate that the ionization states were frozen in at higher than usual coronal temperatures. The source regions of these hot heavy ion spectra are identified as energetic coronal events including flares and nonflare coronal mass ejections. 24 references

  18. Energetic O+ and H+ Ions in the Plasma Sheet: Implications for the Transport of Ionospheric Ions

    Science.gov (United States)

    Ohtani, S.; Nose, M.; Christon, S. P.; Lui, A. T.

    2011-01-01

    The present study statistically examines the characteristics of energetic ions in the plasma sheet using the Geotail/Energetic Particle and Ion Composition data. An emphasis is placed on the O+ ions, and the characteristics of the H+ ions are used as references. The following is a summary of the results. (1) The average O+ energy is lower during solar maximum and higher during solar minimum. A similar tendency is also found for the average H+ energy, but only for geomagnetically active times; (2) The O+ -to -H+ ratios of number and energy densities are several times higher during solar maximum than during solar minimum; (3) The average H+ and O+ energies and the O+ -to -H+ ratios of number and energy densities all increase with geomagnetic activity. The differences among different solar phases not only persist but also increase with increasing geomagnetic activity; (4) Whereas the average H+ energy increases toward Earth, the average O+ energy decreases toward Earth. The average energy increases toward dusk for both the H+ and O+ ions; (5) The O+ -to -H+ ratios of number and energy densities increase toward Earth during all solar phases, but most clearly during solar maximum. These results suggest that the solar illumination enhances the ionospheric outflow more effectively with increasing geomagnetic activity and that a significant portion of the O+ ions is transported directly from the ionosphere to the near ]Earth region rather than through the distant tail.

  19. Fast-ion response to energetic-particle-driven MHD activity in Heliotron J

    Energy Technology Data Exchange (ETDEWEB)

    Kobayashi, S.; Yamamoto, S.; Mizuuchi, T.; Nagasaki, K.; Okada, H.; Minami, T.; Hanatani, K.; Konoshima, S.; Ohshima, S.; Toushi, K.; Sano, F. [Institute of Advanced Energy, Kyoto University, Gokasho, Uji (Japan); Nagaoka, K.; Suzuki, Y.; Takeiri, Y.; Yokoyama, M. [National Institute for Fusion Science, Toki, Gifu (Japan); Murakami, S. [Graduate School of Engineering, Kyoto University, Kyoto (Japan); Lee, H.Y.; Nakamura, Y.; Hosaka, K. [Graduate School of Energy Science, Kyoto University, Gokasho, Uji (Japan)

    2010-08-15

    In Heliotron J, low magnetic shear configuration, instabilities with frequency chirping in the frequency range of Alfven eigenmodes have been observed in tangentially injected neutral beam plasmas. These modes are induced by energetic-particle driven magnetohydrodynamic (MHD) instabilities such as global Alfven eigenmode or energetic particle mode. A hybrid directional Langmuir probe system has been installed into Heliotron J to investigate the response of fast-ion fluxes to the MHD modes. A high coherent response of the ion flux to the bursting modes has been observed not only by the co-directed probe but also by the counter-directed one. A linear correlation between the response of the co-directed ion flux and the mode amplitude has been found. The radial profile of the response of the co-directed ions has decreased with the minor radius and has not been obtained significantly outside last closed flux surface. These results indicate that the fast-ion response is due to a resonant convective oscillation. The ion flux response of the counter-directed probe has appeared in the growth phase of the mode burst. Its phase relation is different from that of co-directed one and magnetic probe located at the Heliotron J vacuum vessel. Two candidates of the detected ion flux of the counter-directed probe have been discussed. (copyright 2010 WILEY-VCH Verlag GmbH and Co. KGaA, Weinheim) (orig.)

  20. Solar wind contribution to the average population of energetic He(+) and He(++) ions in the Earth's magnetosphere

    Science.gov (United States)

    Kremser, G.; Rasinkangas, R.; Tanskanen, P.; Wilken, B.; Gloeckler, G.

    1994-01-01

    Measurements with the ion charge-energy-mass spectrometer CHEM on the AMPTE/CCE spacecraft were used to investigate the origin of energetic He(+) and He(++) ions observed in the equatorial plane at 3 less than or equal to L less than or equal to 9. Special emphasis was laid on the dependence of long-term average distributions on magnetic local time (MLT) and the geomagnetic activity index K(sup p). The observations are described in terms of the phase space densities f(sub 1) (for He(+)) and f(sub 2) (for He(++)). They confirm preliminary results from a previous study f(sub 1) is independent of MLT, whereas f(sub 2) is much larger on the nightside than on the dayside. They show, furthermore, that f(sub 1) increases slightly with K(sub p) on intermediate drift shells, but decreases on high drift shells (L greater than or equal to 7). f(sub 2) increases with K(sub p) on all drift shells outside the premidnight sector. Within this sector a decrease is observed on high drift shells. A simple ion tracing code was developed to determine how and from where the ions move into the region of observations. It provides ion trajectories as a function of the ion charge, the magnetic moment and K(sub p). The ion tracing enables a distinction between regions of closed drift orbits (ring current) and open convection trajectories (plasma sheet). It also indicates how the outer part of the observation region is connected to different parts of the more distant plasma sheet. Observations and tracing show that He(++) ions are effectively transported from the plasma sheet on convection trajectories. Their distribution in the observation region corresponds to the distribution of solar wind ions in the plasma sheet. Thus, energetic He(++) ions most likely originate in the solar wind. On the other hand, the plasma sheet is not an important source of energetic He(+) ions. Convection trajectories more likely constitute a sink for He(+) ions, which may diffuse onto them from closed drift orbits

  1. Origins of energetic ions in the Earth's magnetosheath. Final Report, 8 May 1991 - 5 Jun. 1992

    International Nuclear Information System (INIS)

    Fuselter, S.A.; Shelley, E.G.; Klumpar, D.M.

    1992-06-01

    The analysis and interpretation of the combined scientific data from the Hot Plasma Composition Experiment (HPCE) and the Charge Energy Mass (CHEM) spectrometer on the Active Mesospheric Particle Tracer Experiment (AMPTE) Charge Composition Explorer (CCE) spacecraft are discussed. These combined data sets have and will be used to survey the energetic ion environment in the Earth's magnetosheath to determine the origins and relative strengths of the energetic ion populations found there. A computer code was developed to analyze and interpret the data sets. The focus of the first year was on the determination of the contribution of leaked magnetospheric protons to the total energetic proton population. Emphasis was placed on intervals when the AMPTE spacecraft was in the plasma depletion layer because it was argued that in this region, only the leaked population contributes to the energetic ion population. Manipulation of the CHEM data and comparison of the CHEM and HPCE data over their common energy range near the magnetopause also contributed directly to a second study of that region

  2. Neutral Particle Analyzer Vertically Scanning Measurements of MHD-induced Energetic Ion Redistribution or Loss in the National Spherical Torus Experiment

    International Nuclear Information System (INIS)

    Medley, S.S.; Andre, R.; Bell, R.E.; Darrow, D.S.; Domier, C.W.; Fredrickson, E.D.; Gorelenkov, N.N.; Kaye, S.M.; LeBlanc, B.P.; Lee, K.C.; Levinton, F.M.; Liu, D.; Luhmann, N.C. Jr.; Menard, J.E.; Park, H.; Stutman, D.; Roquemore, A.L.; Tritz, K.; Yuh, H

    2007-01-01

    Observations of magneto-hydro-dynamic (MHD) induced redistribution or loss of energetic ions measured using the vertically scanning capability of the Neutral Particle Analyzer diagnostic on the National Spherical Torus Experiment (NSTX) are presented along with TRANSP and ORBIT code analysis of the results. Although redistribution or loss of energetic ions due to bursting fishbone-like and low-frequency (f ∼ 10 kHz) kinktype MHD activity has been reported previously, the primary goal of this work is to study redistribution or loss due to continuous Alfvenic (f ∼ 20-150 kHz) modes, a topic that heretofore has not been investigated in detail for NSTX plasmas. Initial indications are that the former drive energetic ion loss whereas the continuous Alfvenic modes only cause redistribution and the energetic ions remain confined.

  3. Neutral Particle Analyzer Vertically Scanning Measurements of MHD-induced Energetic Ion Redistribution or Loss in the National Spherical Torus Experiment

    Energy Technology Data Exchange (ETDEWEB)

    S.S. Medley, R. Andre, R.E. Bell, D.S. Darrow, C.W. Domier, E.D. Fredrickson, N.N. Gorelenkov, S.M. Kaye, B.P. LeBlanc, K.C. Lee, F.M. Levinton, D. Liu, N.C. Luhmann, Jr., J.E. Menard, H. Park, D. Stutman, A.L. Roquemore, K. Tritz, H. Yuh and the NSTX Team

    2007-11-15

    Observations of magneto-hydro-dynamic (MHD) induced redistribution or loss of energetic ions measured using the vertically scanning capability of the Neutral Particle Analyzer diagnostic on the National Spherical Torus Experiment (NSTX) are presented along with TRANSP and ORBIT code analysis of the results. Although redistribution or loss of energetic ions due to bursting fishbone-like and low-frequency (f ~ 10 kHz) kinktype MHD activity has been reported previously, the primary goal of this work is to study redistribution or loss due to continuous Alfvénic (f ~ 20 – 150 kHz) modes, a topic that heretofore has not been investigated in detail for NSTX plasmas. Initial indications are that the former drive energetic ion loss whereas the continuous Alfvénic modes only cause redistribution and the energetic ions remain confined.

  4. Observation of self-sputtering in energetic condensation of metal ions

    International Nuclear Information System (INIS)

    Anders, Andre

    2004-01-01

    The condensation of energetic metal ions on a surface may cause self-sputtering even in the absence of substrate bias. Charge-state-averaged self-sputtering yields were determined for both zirconium and gold ions generated by a cathodic vacuum arc. Films were deposited on differently biased substrates exposed to streaming Zr and Au vacuum arc plasma. The self-sputtering yields for both metals were estimated to be about 0.05 in the absence of bias, and exceeding 0.5 when bias reached-50 V. These surprisingly high values can be reconciled with binary collision theory and molecular dynamics calculations taking high the kinetic and potential energy of vacuum arc ions into account

  5. Charge equilibrium processes of energetic incident ions and their range

    International Nuclear Information System (INIS)

    Kawagoshi, Hiroshi; Karashima, Shosuke; Watanabe, Tsutomu.

    1984-01-01

    The charge state of energetic ions passing through a certain matter is varied by charge-exchange processes. A rate equation for charge fraction is given by using electron loss and capture cross sections in collision with a target atom under idealized condition. We solved the rate equation of the charge-exchange process of a single electron in a form of linear coupled differential equation. Our calcuiation for the range of ion were carried out for He, Ne and Ar ions passing through an atomic hydrogen gas target. We discuss the charge states of the projectile in relation to a local charge balance consituting a state of charge equilibrium in the target. (author)

  6. The GOES-16 Energetic Heavy Ion Instrument Proton and Helium Fluxes for Space Weather Applications

    Science.gov (United States)

    Connell, J. J.; Lopate, C.

    2017-12-01

    The Energetic Heavy Ion Sensor (EHIS) was built by the University of New Hampshire, subcontracted to Assurance Technology Corporation, as part of the Space Environmental In-Situ Suite (SEISS) on the new GOES-16 satellite, in geostationary Earth orbit. The EHIS measures energetic ions in space over the range 10-200 MeV for protons, and energy ranges for heavy ions corresponding to the same stopping range. Though an operational satellite instrument, EHIS will supply high quality data for scientific studies. For the GOES Level 1-B and Level 2 data products, protons and helium are distinguished in the EHIS using discriminator trigger logic. Measurements are provided in five energy bands. The instrumental cadence of these rates is 3 seconds. However, the primary Level 1-B proton and helium data products are 1-minute and 5-minute averages. The data latency is 1 minute, so data products can be used for real-time predictions as well as general science studies. Protons and helium, comprising approximately 99% of all energetic ions in space are of great importance for Space Weather predictions. We discuss the preliminary EHIS proton and helium data results and their application to Space Weather. The EHIS instrument development project was funded by NASA under contract NNG06HX01C.

  7. Energetic and frictional effects in the transport of ions in a cyclic peptide nanotube

    Energy Technology Data Exchange (ETDEWEB)

    Seo, Yongil; Song, Yeon Ho; Hwang, Hyeon Seok [Dept. of Chemistry and Institute for Molecular Science and Fusion Technology, Kangwon National University, Chuncheon (Korea, Republic of); Schatz, George C. [Dept. of Chemistry, Northwestern University, Evanston (United States)

    2017-01-15

    The effects of geometric restraints and frictional parameters on the energetics and dynamics of ion transport through a synthetic ion channel are investigated using molecular dynamics (MD) simulations for several different ions. To do so, potential of mean force profiles and position-dependent diffusion coefficients for Na{sup +}, K{sup +}, Ca{sup 2+}, and Cl{sup −} transport through a simple cyclic peptide nanotube, which is composed of 4× cyclo[−(D-Ala-Glu-D-Ala-Gln){sub 2−}] rings, are calculated via an adaptive biasing force MD simulation method and a Baysian inference/Monte Carlo algorithm. Among the restraints and parameters examined in this work, the radius parameter used in the flat-bottom half-harmonic restraint at the entrance and exit to channel has a great effect on the energetics of ion transport through the variation of entropy in the outside of the channel. The diffusivity profiles for the ions show a strong dependence on the damping coefficient, but the dependence on the coefficient becomes minimal inside the channel, indicating that the most important factor which affects the diffusivity of ions inside the channel is local interactions of ions with the structured channel water molecules through confinement.

  8. Measurement of the force on microparticles in a beam of energetic ions and neutral atoms

    International Nuclear Information System (INIS)

    Trottenberg, Thomas; Schneider, Viktor; Kersten, Holger

    2010-01-01

    The force on microparticles in an energetic ion beam is investigated experimentally. Hollow glass microspheres are injected into the vertically upward directed beam and their trajectories are recorded with a charge-coupled device camera. The net force on the particles is determined by means of the measured vertical acceleration. The resulting beam pressures are compared with Faraday cup measurements of the ion current density and calorimetric measurements of the beam power density. Due to the neutral gas background, the beam consists, besides the ions, of energetic neutral atoms produced by charge-exchange collisions. It is found that the measured composition of the drag force by an ion and a neutral atom component agrees with a beam model that takes charge-exchange collisions into account. Special attention is paid to the momentum contribution from sputtered atoms, which is shown to be negligible in this experiment, but should become measurable in case of materials with high sputtering yields.

  9. Energetic ion emission in a positive polarity nanosecond plasma opening switch

    Energy Technology Data Exchange (ETDEWEB)

    Sarfaty, M [Univ. of Wisconsin, Madison, WI (United States); Krasik, Ya E; Weingarten, A; Fruchtman, A; Maron, Y [Weizmann Institute of Science, Rehovot (Israel). Department of Physics

    1997-12-31

    The emission was studied of energetic ions from the plasma in a coaxial Plasma Opening Switch (POS) powered by a 300 kV, 15 kA, 90 ns positive polarity pulse. Fluxes lasting 2 - 3 ns of ions flowing radially onto the cathode were observed at all axial locations of the switch plasma within 5 ns of the beginning of the upstream POS current. It is suggested that the termination of this ion flux is due to the formation of a cathode plasma, which is consistent with our spectroscopic measurements. Later in the pulse, longer duration (100 ns) ion fluxes were observed radially, first appearing in the generator side of the switch plasma. Fluxes 30 - 40 ns long of ions flowing axially towards the POS load at velocities (2{+-}1) x 10{sup 8} cm/s were also observed. The dependences of the start time of the axial ion flow, of the ion velocities, and of the ion flux on the POS operation parameters were studied. (author). 6 figs., 5 refs.

  10. Energetic ion emission in a positive polarity nanosecond plasma opening switch

    International Nuclear Information System (INIS)

    Sarfaty, M.; Krasik, Ya.E.; Weingarten, A.; Fruchtman, A.; Maron, Y.

    1996-01-01

    The emission was studied of energetic ions from the plasma in a coaxial Plasma Opening Switch (POS) powered by a 300 kV, 15 kA, 90 ns positive polarity pulse. Fluxes lasting 2 - 3 ns of ions flowing radially onto the cathode were observed at all axial locations of the switch plasma within 5 ns of the beginning of the upstream POS current. It is suggested that the termination of this ion flux is due to the formation of a cathode plasma, which is consistent with our spectroscopic measurements. Later in the pulse, longer duration (100 ns) ion fluxes were observed radially, first appearing in the generator side of the switch plasma. Fluxes 30 - 40 ns long of ions flowing axially towards the POS load at velocities (2±1) x 10 8 cm/s were also observed. The dependences of the start time of the axial ion flow, of the ion velocities, and of the ion flux on the POS operation parameters were studied. (author). 6 figs., 5 refs

  11. Calculation of energetic characteristics of 3d-transition metal ion aquacomplexes in tetrahedral and octahedral coordination by broadened Hukkel method

    International Nuclear Information System (INIS)

    Zhogolev, D.A.; Bunyatyan, B.Kh.; Yatsimirskij, K.B.

    1975-01-01

    Aquacomplexes formation energies of bi- and trivalent ions of 3d transition metals from Sc to Ni in the tetrahedral and octahedral coordinations have been calculated to compare their energetic advantages. Unlike ions of alkali metals and halogens, a tendency for higher or at least equal energetic effect of the formation of a tetrahedral complex, compared to octahedral, is characteristic of the ions under study. This can be explained by an increase in the covalency degree of the bond ion-ligand and by a considerable charge transfer from ligands to the central ion in the case of transition elements

  12. The dynamics of a neoclassical tearing mode (NTM) influenced by energetic ions on EAST

    International Nuclear Information System (INIS)

    Li, Erzhong; Xu, L; Shi, T; Zhao, H; Liu, Y; Ti, A; Zhang, J; Huang, J; Shen, B; Lin, S; Qian, J; Gong, X; Hu, L; Igochine, V; White, R; Zhu, Y

    2016-01-01

    In the 2014 year’s campaign of experimental advanced superconducting tokamak (EAST), a series of Magnetohydrodynamics (MHD) instabilities were observed as the launching of Neutral Beam Injection (NBI), the most interesting one of which is the neoclassical tearing mode (NTM). Evidence clearly shows that a kink mode present after a strong sawtooth-like (ST-like) crash leaves a perturbation near the location of the magnetic island, providing the initial seed. The interaction of energetic ions makes the magnetic island oscillate both in island width and in rotation frequency. Analysis indicates that the bulk plasma still dominates the dynamics of NTM, and the orbit excursion of energetic ions induces a polarization current and modifies the width and rotation frequency of the neoclassical magnetic island. (paper)

  13. Macromolecular diffusion in crowded media beyond the hard-sphere model.

    Science.gov (United States)

    Blanco, Pablo M; Garcés, Josep Lluís; Madurga, Sergio; Mas, Francesc

    2018-04-25

    The effect of macromolecular crowding on diffusion beyond the hard-core sphere model is studied. A new coarse-grained model is presented, the Chain Entanglement Softened Potential (CESP) model, which takes into account the macromolecular flexibility and chain entanglement. The CESP model uses a shoulder-shaped interaction potential that is implemented in the Brownian Dynamics (BD) computations. The interaction potential contains only one parameter associated with the chain entanglement energetic cost (Ur). The hydrodynamic interactions are included in the BD computations via Tokuyama mean-field equations. The model is used to analyze the diffusion of a streptavidin protein among different sized dextran obstacles. For this system, Ur is obtained by fitting the streptavidin experimental long-time diffusion coefficient Dlongversus the macromolecular concentration for D50 (indicating their molecular weight in kg mol-1) dextran obstacles. The obtained Dlong values show better quantitative agreement with experiments than those obtained with hard-core spheres. Moreover, once parametrized, the CESP model is also able to quantitatively predict Dlong and the anomalous exponent (α) for streptavidin diffusion among D10, D400 and D700 dextran obstacles. Dlong, the short-time diffusion coefficient (Dshort) and α are obtained from the BD simulations by using a new empirical expression, able to describe the full temporal evolution of the diffusion coefficient.

  14. Solar wind contribution to the average population of energetic He+ and He++ ions in the Earth's magnetosphere

    Directory of Open Access Journals (Sweden)

    G. Kremser

    Full Text Available Measurements with the ion charge-energy-mass spectrometer CHEM on the AMPTE/CCE spacecraft were used to investigate the origin of energetic He+ and He++ ions observed in the equatorial plane at 3 ≤ L ≤ 9. Special emphasis was laid on the dependence of long-term average distributions on magnetic local time (MLT and the geomagnetic activity index Kp. The observations are described in terms of the phase space densities f1 (for He+ and f2 (for He++. They confirm preliminary results from a previous study: f1 is independent of MLT, whereas f2 is much larger on the nightside than on the dayside. They show, furthermore, that f1 increases slightly with Kp on intermediate drift shells, but decreases on high drift shells (L ≥ 7. f2 increases with Kp on all drift shells outside the premidnight sector. Within this sector a decrease is observed on high drift shells. A simple ion tracing code was developed to determine how and from where the ions move into the region of observations. It provides ion trajectories as a function of the ion charge, the magnetic moment and Kp. The ion tracing enables a distinction between regions of closed drift orbits (ring current and open convection trajectories (plasma sheet. It also indicates how the outer part of the observation region is connected to different parts of the more distant plasma sheet. Observations and tracing show that He++ ions are effectively transported from the plasma sheet on convection trajectories. Their distribution in the observation region corresponds to the distribution of solar wind ions in the plasma sheet. Thus, energetic He++ ions most likely originate in the solar wind. On the other hand, the plasma sheet is not an

  15. Extended ion energetics data base for mass spectrometric characterization of energy related pollutants. Final report

    International Nuclear Information System (INIS)

    Parr, A.C.

    1983-01-01

    This project funded research at NBS from September, 1982 until November, 1983 and represented a continuation of an effort in precision ion thermochemistry measurements and calculations. The effort was divided into two main areas: laboratory effort using threshold photoelectron-photoion coincidence spectroscopy and a theoretical effort in ion energetics estimation schemes

  16. Geometric and energetic considerations of surface fluctuations during ion transfer across the water-immiscible organic liquid interface

    Energy Technology Data Exchange (ETDEWEB)

    Karnes, John J.; Benjamin, Ilan, E-mail: benjamin@chemistry.ucsc.edu [Department of Chemistry and Biochemistry, University of California, Santa Cruz, California 95064 (United States)

    2016-07-07

    Molecular dynamics simulations and umbrella sampling free energy calculations are used to examine the thermodynamics, energetics, and structural fluctuations that accompany the transfer of a small hydrophilic ion (Cl{sup −}) across the water/nitrobenzene interface. By examining several constrained interface structures, we isolate the energetic costs of interfacial deformation and co-transfer of hydration waters during the ion transfer. The process is monitored using both energy-based solvation coordinates and a geometric coordinate recently introduced by Morita and co-workers to describe surface fluctuations. Our simulations show that these coordinates provide a complimentary description of the water surface fluctuations during the transfer and are necessary for elucidating the mechanism of the ion transfer.

  17. Energetic ion diagnostics using neutron flux measurements during pellet injection

    International Nuclear Information System (INIS)

    Heidbrink, W.W.

    1986-01-01

    Neutron measurements during injection of deuterium pellets into deuterium plasmas on the Tokamak Fusion Test Reactor (TFTR) indicate that the fractional increase in neutron emission about 0.5 msec after pellet injection is proportional to the fraction of beam-plasma reactions to total fusion reactions in the unperturbed plasma. These observations suggest three diagnostic applications of neutron measurements during pellet injection: (1) measurement of the beam-plasma reaction rate in deuterium plasmas for use in determining the fusion Q in an equivalent deuterium-tritium plasma, (2) measurement of the radial profile of energetic beam ions by varying the pellet size and velocity, and (3) measurement of the ''temperature'' of ions accelerated during wave heating. 18 refs., 3 figs

  18. Drift-shell splitting of energetic ions injected at pseudo-substorm onsets

    International Nuclear Information System (INIS)

    Takahashi, K.; Anderson, B.J.; Ohtani, S.; Reeves, G.D.; Takahashi, S.; Sarris, T.E.; Mursula, K.

    1997-01-01

    One feature of a magnetospheric substorm is the injection of energetic particles into closed drift orbits. Injections are routinely observed by geosynchronous satellites and have been used to identify the occurrence of substorms and the local time of particle energization. In this study we examine pitch angle distributions of ion injections in the 50-to 300-keV energy range observed by the Active Magnetospheric Particle Tracer Explorers Charge Composition Explorer (AMPTE/CCE) satellite, hereinafter CCE. In a dipole field, all pitch angles follow the same drift shell, but the day night asymmetry of the magnetospheric magnetic field introduces a pitch angle dependence in particle drift orbits, so that particles with different pitch angles disperse radially as they drift. The effect is known as drift-shell splitting. For satellite observations near noon at a fixed geocentric distance, the guiding center orbits of ions detected at small pitch angles intersect the midnight meridian at larger geocentric distances than do ions with near-90 degree pitch angles. The ion pitch angle distributions detected on the dayside therefore provide information about the radial distance of the nightside acceleration region. We apply this principle to study ion injection events observed on September 17 - 18, 1984, in association with pseudo-substorm onsets. CCE was at 13 hours local time near its apogee (8.8R E ) and observed a series of ion flux enhancements. Energy dispersion of the timing of the flux increases assures that they are due to injections on the nightside. The flux increases were observed only at pitch angles from 0 degree to 60 degree. We calculate drift orbits of protons using the Tsyganenko 89c magnetic field model and find that the drift orbits for 60 degree pitch angle protons observed at the satellite pass through midnight at 9R E , well outside of geostationary orbit, indicating that the ion injections occurred tailward of 9R E . Energetic ion data from geostationary

  19. Contribution of energetic and heavy ions to the plasma pressure: The 27 September to 3 October 2002 storm

    Science.gov (United States)

    Kronberg, E. A.; Welling, D.; Kistler, L. M.; Mouikis, C.; Daly, P. W.; Grigorenko, E. E.; Klecker, B.; Dandouras, I.

    2017-09-01

    Magnetospheric plasma sheet ions drift toward the Earth and populate the ring current. The ring current plasma pressure distorts the terrestrial internal magnetic field at the surface, and this disturbance strongly affects the strength of a magnetic storm. The contribution of energetic ions (>40 keV) and of heavy ions to the total plasma pressure in the near-Earth plasma sheet is not always considered. In this study, we evaluate the contribution of low-energy and energetic ions of different species to the total plasma pressure for the storm observed by the Cluster mission from 27 September until 3 October 2002. We show that the contribution of energetic ions (>40 keV) and of heavy ions to the total plasma pressure is ≃76-98.6% in the ring current and ≃14-59% in the magnetotail. The main source of oxygen ions, responsible for ≃56% of the plasma pressure of the ring current, is located at distances earthward of XGSE ≃ -13.5 RE during the main phase of the storm. The contribution of the ring current particles agrees with the observed Dst index. We model the magnetic storm using the Space Weather Modeling Framework (SWMF). We assess the plasma pressure output in the ring current for two different ion outflow models in the SWMF through comparison with observations. Both models yield reasonable results. The model which produces the most heavy ions agrees best with the observations. However, the data suggest that there is still potential for refinement in the simulations.

  20. Energetic ion diagnostics using neutron flux measurements during pellet injection

    Energy Technology Data Exchange (ETDEWEB)

    Heidbrink, W.W.

    1986-01-01

    Neutron measurements during injection of deuterium pellets into deuterium plasmas on the Tokamak Fusion Test Reactor (TFTR) indicate that the fractional increase in neutron emission about 0.5 msec after pellet injection is proportional to the fraction of beam-plasma reactions to total fusion reactions in the unperturbed plasma. These observations suggest three diagnostic applications of neutron measurements during pellet injection: (1) measurement of the beam-plasma reaction rate in deuterium plasmas for use in determining the fusion Q in an equivalent deuterium-tritium plasma, (2) measurement of the radial profile of energetic beam ions by varying the pellet size and velocity, and (3) measurement of the ''temperature'' of ions accelerated during wave heating. 18 refs., 3 figs.

  1. Neoclassical transport of energetic minority tail ions generated by ion-cyclotron resonance heating in tokamak geometry

    International Nuclear Information System (INIS)

    Chang, C.S.; Hammett, G.W.; Goldston, R.J.

    1990-01-01

    Neoclassical transport of energetic minority tail ions, which are generated by high powered electromagnetic waves of the Ion Cyclotron Range of Frequencies (ICRF) at the fundamental harmonic resonance, is studied analytically in tokamak geometry. The effect of Coulomb collisions on the tail ion transport is investigated in the present work. The total tail ion transport will be the sum of the present collision-driven transport and the wave-driven transport, which is due to the ICRF-wave scattering of the tail particles as reported in the literature. The transport coefficients have been calculated kinetically, and it is found that the large tail ion viscosity, driven by the localized ICRF-heating and Coulomb slowing-down collisions, induces purely convective particle transport of the tail species, while the energy transport is both convective and diffusive. The rate of radial particle transport is shown to be usually small, but the rate of radial energy transport is larger and may not be negligible compared to the Coulomb slowing-down rate. 18 refs., 2 figs

  2. The energetic ion substorm injection boundary

    International Nuclear Information System (INIS)

    Lopez, R.E.; Sibeck, D.G.; McEntire, R.W.; Krimigis, S.M.

    1990-01-01

    The substorm injection boundary model has enjoyed considerable success in explaining plasma signatures in the near-geosynchronous region. However, the injection boundary has remained primarily a phenomenological model. In this paper the authors examine 167 dispersionless energetic ion injections which were observed by AMPTE CCE. The radial and local time distribution of the events as a function of Kp is qualitatively similar to that envisioned in the injection boundary model of Mauk and McIlwain (1974). They argue that particles observed during dispersionless injections are locally energized during the disruption of the cross-tail current sheet. Therefore they identify the injection boundary, as derived from the spatial distribution of dispersionless injections, with the earthward edge of the region of the magnetotail which undergoes current sheet disruption during the substorm expansion phase. The authors show that this qualitative model for the generation of the injection boundary can provide an explanation for the dispersionless nature, the double spiral shape, and the Kp dependence of the boundary

  3. Kappa distributions in Saturn's magnetosphere: energetic ion moments using Cassini/MIMI measurements

    Science.gov (United States)

    Dialynas, K.; Roussos, E.; Regoli, L.; Paranicas, C.; Krimigis, S. M.; Kane, M.; Mitchell, D. G.; Hamilton, D. C.

    2017-12-01

    Moments of the charged particle distribution function are a compact way of characterizing some of the properties of different magnetospheric regions. Following our previous analyses (Dialynas et al. 2009) and the techniques described in Dialynas et al. (2017), in the present study we use κ-Distribution fits to combine CHEMS (3 to 236 keV/e), LEMMS (0.024 220 keV) H+ and O+ energetic ion spectra covering measurements made in 2004-2016 to calculate the >20 keV energetic ion moments inside Saturn's magnetosphere. We use the Khurana et al. [2007] magnetic field model to map the ion measurements to the equatorial plane and produce the equatorial distributions of all ion integral moments, focusing on partial density (n), integral intensity (In), partial pressure (P), integral energy intensity (IE); as well as the characteristic energy (Ec=Ie/In), Temperature and κ-index of these ions as a function of Local Time (00:00 to 24:00 hrs) and L-Shell (5-20 Rs). The Roelof and Skinner [2000] model is then utilized to retrieve the equatorial H+ and O+ P, n and T in both local time and L-shell. We find that a) although the PH+ and PO+ are nearly comparable, H+ have higher IE and In at all radial distances (L>5) and local times; b) the 12Η+, ΓΟ+), are consistent with the Arridge et al. [2009] results. Dialynas K. et al. 2009, JGR, 114, A01212 Dialynas K. et al. 2017, Elsevier, ISBN: 9780128046388 Khurana K. K. et al. 2007, AGU, abstract #P44A-01 Roelof E. & A. Skinner 2000, SSR, 91, 437-459 Arridge C. S. et al. 2009, PSS, 57, 2032-2047

  4. Physics of energetic ions

    International Nuclear Information System (INIS)

    1999-01-01

    Physics knowledge (theory and experiment) in energetic particles relevant to design of a reactor scale tokamak is reviewed, and projections for ITER are provided in this Chapter of the ITER Physics Basis. The review includes single particle effects such as classical alpha particle heating and toroidal field ripple loss, as well as collective instabilities that might be generated in ITER plasmas by energetic alpha particles. The overall conclusion is that fusion alpha particles are expected to provide an efficient plasma heating for ignition and sustained burn in the next step device. The major concern is localized heat loads on the plasma facing components produced by alpha particle loss, which might affect their lifetime in a tokamak reactor. (author)

  5. Interaction of energetic particles with polymer surfaces: surface morphology development and sputtered polymer-fragment ion analysis

    International Nuclear Information System (INIS)

    Michael, R.S.

    1987-01-01

    The core of this thesis is based on a series of papers that have been published or will soon be published in which the various processes taking place in the energetic particle-polymer surface interaction scene is investigated. Results presented show different developments on polymer surfaces when compared to the vast experimental data on energetic particle-metal surface interactions. The surface morphology development depends on the physical characteristics of the polymer. Sputtering yields of fluoropolymers were several orders higher than the sputtering yields of aliphatic and aromatic polymers. Depending on the chemical nature of the polymer, the surface morphology development was dependent upon the extent of radiation-damage accumulation. Fast Atom Bombardment Mass Spectrometry at low and high resolution was applied to the characterization of sputtered polymer fragment ions. Fragment ions and their intensities were used to identify polymer samples, observe radiation damage accumulation and probe polymer-polymer interface of a polymer-polymer sandwich structure. A model was proposed which attempts to explain the nature of processes involved in the energetic particle-polymer surface interaction region

  6. Effects of Energetic Ion Outflow on Magnetospheric Dynamics

    Science.gov (United States)

    Kistler, L. M.; Mouikis, C.; Lund, E. J.; Menz, A.; Nowrouzi, N.

    2016-12-01

    There are two dominant regions of energetic ion outflow: the nightside auroral region and the dayside cusp. Processes in these regions can accelerate ions up to keV energies. Outflow from the nightside has direct access to the plasma sheet, while outflow from the cusp is convected over the polar cap and into the lobes. The cusp population can enter the plasma sheet from the lobe, with higher energy ions entering further down the tail than lower energy ions. During storm times, the O+ enhanced plasma sheet population is convected into the inner magnetosphere. The plasma that does not get trapped in the inner magnetosphere convects to the magnetopause where reconnection is taking place. An enhanced O+ population can change the plasma mass density, which may have the effect of decreasing the reconnection rate. In addition O+ has a larger gyroradius than H+ at the same velocity or energy. Because of this, there are larger regions where the O+ is demagnetized, which can lead to larger acceleration because the O+ can move farther in the direction of the electric field. In this talk we will review results from Cluster, Van Allen Probes, and MMS, on how outflow from the two locations affects magnetospheric dynamics. We will discuss whether enhanced O+ from either population has an effect on the reconnection rate in the tail or at the magnetopause. We will discuss how the two populations impact the inner magnetosphere during storm times. And finally, we will discuss whether either population plays a role in triggering substorms, particularly during sawtooth events.

  7. Interaction of energetic ions with high-density plasmas

    International Nuclear Information System (INIS)

    Gericke, D.O.; Edie, D.; Grinenko, A.; Vorberger, J.

    2010-01-01

    Complete text of publication follows. The talk will review the importance of energetic ions in different inertial confinement fusion scenarios: i) heavy ion beams are very efficient drivers that can deliver the energy for compression in indirect as well as direct drive approaches; ii) the interaction of α-particles, that are created in a burning plasma, with the surrounding cold plasma is essential for creating a burn wave; iii) laser-produced ion beams are also a strong candidate to create the hot spot needed for fast ignition. In all applications the ions interact with dense matter that is characterized by strongly coupled ions and (possibly) partially degenerate electrons. Moreover, the coupling between beam ions and target electrons can be strong as well. Under these conditions, standard approaches for the beam-plasma interactions process are known to fail. The presentation will demonstrate how advanced models for the energy loss of ions in dense plasmas can resolve the issues mentioned above. These models are largely built on quantum kinetic theory that is able to describe degeneracy and strong coupling in a systematic way. In particular, strong interactions require a quantum description for electron-ion collisions in dense plasma environments, which is done by direct solutions of the Schroedinger equation. Degeneracy and collective excitations can be included via the Lenard-Balescu description where strong interactions may be included via a pseudo-potential approach. Finally, results are shown for all three fusion applications described above. The effects related to strong coupling and degeneracy mainly concern the end of the stopping range where the beam ion dose not have enough energy to excite all possible degrees of freedom and, thus, certain processes are frozen out. However, we also find a significant reduction of the range for swift heavy ions in the GeV-range when stopping in dense matter is considered. The stopping range of α-particles in the

  8. Asymmetric Distributions of Energetic Circulating Ions and Sawtooth Control using ICCD and Unbalanced NBI

    International Nuclear Information System (INIS)

    Graves, J. P.

    2007-01-01

    There is little doubt that various auxiliary heating systems are successfully and routinely controlling sawteeth. There is however some room for improving our understanding of the mechanisms that influence these important changes to the discharges. A mechanism that appears to be common across ECCS, ICCD and unbalanced NBI discharges involves the effect of the q = 1 localised current drive perturbation on resistive diffusion during the sawtooth ramp. Nevertheless, it is important to look for explanations for sawtooth control which may exist in ion based auxiliary systems, but may differ or not exist in electron auxiliary means of sawtooth control. The reason for this is that monster sawteeth, initially lengthened by trapped energetic ions, have up to the present day only been controlled using ICCD, while in ITER the primary method for sawtooth control could be ECCD. A mechanism based on the finite orbit width of parallel asymmetric energetic circulating particles is only non-negligible for ion based auxiliary systems. The present contribution examines the relevance of the latter in sawtooth control experiments, such as those using ICCD and NBI at JET, by looking carefully at the role of circulating ions close to the trapped boundary. At such pitch angles the orbit width is largest, and the parallel asymmetry of the distribution function has the greatest influence. (Author)

  9. Winter nightime ion temperatures and energetic electrons from 0go 6 plasma measurements

    International Nuclear Information System (INIS)

    Sanatani, S.; Breig, E.L.

    1981-01-01

    This paper presents and discusses ion temperature and suprathermal electron flux data acquired with the retarding potential analyzer on board the ogo 6 satellite when it was in solar eclipse. Attention is directed to measurements in the 400- to 800-km height interval between midnight and predawn in the northern winter nonpolar ionosphere. Statistical analysis of data recorded during a 1-month time span permits a decoupling of horizontal and altitude effects. A distinct longitudinal variation is observed for ion temperature above 500 km, with a significant relative enhancement over the western North Altantic Altitude distributions of ion temperature are compatible with Millstone Hill profiles within the common region of this enhancement. Large fluxes of energetic electrons are observed and extend to mush lower geomagnetic latitudes in the same longitude sector. Both a direct correlation in magnitude and a strong similarity in spatial extent are demonstrated for these ion temperature and electron flux data. The location of the limiting low-altitude boundary for observation of the electron fluxes is variable, dependent on local time and season as well as longitude. Variations in this boundary are found to be consistent with a calculated conjugate solar zenith angle of 99 0 +- 2 0 describing photoproduction of energetic electrons in the southern hemisphere. The ogo 6 data are considered to be indicative of an energy source originating in the sunlit summer hemisphere and providing heat via transport of photoelectrons to a broad but preferential segment of the winter nighttime mid-latitude ionosphere. Ions at other longitudes are without access to this energy source and cool to near the neutral temperature at heights to above 800 km inthe predawn hours

  10. Nitrogen isotopic composition of macromolecular organic matter in interplanetary dust particles

    Science.gov (United States)

    Aléon, Jérôme; Robert, François; Chaussidon, Marc; Marty, Bernard

    2003-10-01

    Nitrogen concentrations and isotopic compositions were measured by ion microprobe scanning imaging in two interplanetary dust particles L2021 K1 and L2036 E22, in which imaging of D/H and C/H ratios has previously evidenced the presence of D-rich macromolecular organic components. High nitrogen concentrations of 10-20 wt% and δ 15N values up to +400‰ are observed in these D-rich macromolecular components. The previous study of D/H and C/H ratios has revealed three different D-rich macromolecular phases. The one previously ascribed to macromolecular organic matter akin the insoluble organic matter (IOM) from carbonaceous chondrites is enriched in nitrogen by one order of magnitude compared to the carbonaceous chondrite IOM, although its isotopic composition is still similar to what is known from Renazzo (δ 15N = +208‰). The correlation observed in macromolecular organic material between the D- and 15N-excesses suggests that the latter originate probably from chemical reactions typical of the cold interstellar medium. These interstellar materials preserved to some extent in IDPs are therefore macromolecular organic components with various aliphaticity and aromaticity. They are heavily N-heterosubstituted as shown by their high nitrogen concentrations >10 wt%. They have high D/H ratios >10 -3 and δ 15N values ≥ +400‰. In L2021 K1 a mixture is observed at the micron scale between interstellar and chondritic-like organic phases. This indicates that some IDPs contain organic materials processed at various heliocentric distances in a turbulent nebula. Comparison with observation in comets suggests that these molecules may be cometary macromolecules. A correlation is observed between the D/H ratios and δ 15N values of macromolecular organic matter from IDPs, meteorites, the Earth and of major nebular reservoirs. This suggests that most macromolecular organic matter in the inner solar system was probably issued from interstellar precursors and further processed

  11. The study of penetration of energetic ions in botanic samples with transmission measurements

    International Nuclear Information System (INIS)

    Wang, Y.G.; Chen, Q.Z.; Xue, J.M.; Du, G.H.; Qin, H.L; Zhang, W.M.; Yan, S.; Zhao, W.J.

    2006-01-01

    Botanic samples (onion endocuticles, kidney bean slices) were exposed to energetic ions. By recording transmission spectra, we studied the energy loss in such samples. Individual protrusion-like damage produced in highly oriented pyrolytic graphite (HOPG) substrate allowed us to analyze the mass density of the samples by scanning tunneling microscope (STM). The experimental results showed that the botanic sample is inhomogeneous in mass density, some incident ions lose only a small part of their energy after being stopped by a layer of botanic sample. Additionally, about 10 -7 of the incident ions with energy of tens of keV can penetrate through the botanic slice with a thickness of 50 μm. The dynamic change of the transmission spectrum of MeV heavy ions through a layer of botanic slice showed that the penetration ability of the incident ions increases with increasing ion fluence. These experimental results indicate that the inhomogeneousity of mass density of botanic samples and irradiation damage are the main reasons of the ultra-depth penetration of low-energy ions in such kind of botanic samples

  12. Studies of energetic ion confinement during fishbone events in PDX

    International Nuclear Information System (INIS)

    Strachan, J.D.; Grek, B.; Heidbrink, W.; Johnson, D.; Kaye, S.; Kugel, H.; LeBlanc, B.; McGuire, K.

    1984-11-01

    The 2.5-MeV neutron emission from the beam-target d(d,n,) 3 He fusion reaction has been examined for all PDX deuterium plasmas which were heated by deuterium neutral beams. The magnitude of the emission was found to scale classically and increase with T/sub e//sup 3/2/ as expected when electron drag is the primary energy degradation mechanism. The time evolution of the neutron emission through fishbone events was measured and used to determine the confinement properties of the energetic beam ions. Many of the experimental results are predicted by the Mode Particle Pumping theory

  13. Ionization of water clusters by fast Highly Charged Ions: Stability, fragmentation, energetics and charge mobility

    International Nuclear Information System (INIS)

    Legendre, S; Maisonny, R; Capron, M; Bernigaud, V; Cassimi, A; Gervais, B; Grandin, J-P; Huber, B A; Manil, B; Rousseau, P; Tarisien, M; Adoui, L; Lopez-Tarifa, P; AlcamI, M; MartIn, F; Politis, M-F; Penhoat, M A Herve du; Vuilleumier, R; Gaigeot, M-P; Tavernelli, I

    2009-01-01

    We study dissociative ionization of water clusters by impact of fast Ni ions. Cold Target Recoil Ion Momentum Spectroscopy (COLTRIMS) is used to obtain information about stability, energetics and charge mobility of the ionized clusters. An unusual stability of the (H 2 O) 4 H ''+ ion is observed, which could be the signature of the so called ''Eigen'' structure in gas phase water clusters. High charge mobility, responsible for the formation of protonated water clusters that dominate the mass spectrum, is evidenced. These results are supported by CPMD and TDDFT simulations, which also reveal the mechanisms of such mobility.

  14. Macromolecular therapeutics.

    Science.gov (United States)

    Yang, Jiyuan; Kopeček, Jindřich

    2014-09-28

    This review covers water-soluble polymer-drug conjugates and macromolecules that possess biological activity without attached low molecular weight drugs. The main design principles of traditional and backbone degradable polymer-drug conjugates as well as the development of a new paradigm in nanomedicines - (low molecular weight) drug-free macromolecular therapeutics are discussed. To address the biological features of cancer, macromolecular therapeutics directed to stem/progenitor cells and the tumor microenvironment are deliberated. Finally, the future perspectives of the field are briefly debated. Copyright © 2014 Elsevier B.V. All rights reserved.

  15. ENERGETIC NEUTRAL ATOMS: AN ADDITIONAL SOURCE FOR HELIOSPHERIC PICKUP IONS

    International Nuclear Information System (INIS)

    Bochsler, Peter; Moebius, Eberhard

    2010-01-01

    Recently, Schwadron and McComas discussed the possibility of inner source pickup particles originating from the ionization of energetic neutral atoms (ENAs), based on new data from the IBEX mission. This proposition has some interesting features, namely, it might be able to explain why inner source pickup ions (PUIs) have a composition resembling solar abundances and show no indication of overabundance of refractory elements, although this should be expected, if the conventional explanation of solar wind-dust interaction for the origin of this heliospheric component were correct. In this Letter, we explore further consequences for ENA-related PUIs and investigate their velocity distributions. We conclude that this model will not reproduce the observed velocity distributions of inner source PUIs and point out a substantial deviation in their composition. However, it seems likely that the ionization of ENAs as observed with IBEX could contribute a significant amount of heliospheric suprathermal tail ions. Some possible consequences of our investigation for heliospheric particle populations are briefly discussed.

  16. Nonlocal continuum electrostatic theory predicts surprisingly small energetic penalties for charge burial in proteins.

    Science.gov (United States)

    Bardhan, Jaydeep P

    2011-09-14

    We study the energetics of burying charges, ion pairs, and ionizable groups in a simple protein model using nonlocal continuum electrostatics. Our primary finding is that the nonlocal response leads to markedly reduced solvent screening, comparable to the use of application-specific protein dielectric constants. Employing the same parameters as used in other nonlocal studies, we find that for a sphere of radius 13.4 Å containing a single +1e charge, the nonlocal solvation free energy varies less than 18 kcal/mol as the charge moves from the surface to the center, whereas the difference in the local Poisson model is ∼35 kcal/mol. Because an ion pair (salt bridge) generates a comparatively more rapidly varying Coulomb potential, energetics for salt bridges are even more significantly reduced in the nonlocal model. By varying the central parameter in nonlocal theory, which is an effective length scale associated with correlations between solvent molecules, nonlocal-model energetics can be varied from the standard local results to essentially zero; however, the existence of the reduction in charge-burial penalties is quite robust to variations in the protein dielectric constant and the correlation length. Finally, as a simple exploratory test of the implications of nonlocal response, we calculate glutamate pK(a) shifts and find that using standard protein parameters (ε(protein) = 2-4), nonlocal results match local-model predictions with much higher dielectric constants. Nonlocality may, therefore, be one factor in resolving discrepancies between measured protein dielectric constants and the model parameters often used to match titration experiments. Nonlocal models may hold significant promise to deepen our understanding of macromolecular electrostatics without substantially increasing computational complexity. © 2011 American Institute of Physics

  17. The effect of thermal vibrations of lattice atoms on the scattering of low energetic ions (2-10keV)

    International Nuclear Information System (INIS)

    Poelsema, B.; Boers, A.L.

    1977-01-01

    An introduction to the study of solid state surfaces by analyzing the scattering behavior of low energetic noble gas ions is given. Attention is paid to thermal vibrations of the surface atoms. The scattering of Ar and Kr ions on a Cu monocrystal is discussed as an example

  18. Charge collection mechanisms in MOS/SOI transistors irradiated by energetic heavy ions

    International Nuclear Information System (INIS)

    Musseau, O.; Leray, J.L.; Ferlet, V.; Umbert, A.; Coic, Y.M.; Hesto, P.

    1991-01-01

    We have investigated with both experimental and numerical methods (Monte Carlo and drift-diffusion models) various charge collection mechanisms in NMOS/SOI transistors irradiated by single energetic heavy ions. Our physical interpretations of data emphasize the influence of various parasitic structures of the device. Two charge collection mechanisms are detailed: substrate funneling in buried MOS capacitor and latching of the parasitic bipolar transistor. Based on carrier transport and charge collection, the sensitivity of future scaled down CMOS/SOI technologies is finally discussed

  19. Study of the degradation process of polyimide induced by high energetic ion irradiation

    International Nuclear Information System (INIS)

    Severin, Daniel

    2008-01-01

    The dissertation focuses on the radiation hardness of Kapton under extreme radiation environment conditions. To study ion-beam induced modifications, Kapton foils were irradiated at the GSI linear accelerator UNILAC using several projectiles (e.g. Ti, Mo, Au, and U) within a large fluence regime (1 x 10 10 -5 x 10 12 ions/cm 2 ). The irradiated Kapton foils were analysed by means of infrared and UV/Vis spectroscopy, tensile strength measurement, mass loss analysis, and dielectric relaxation spectroscopy. For testing the radiation stability of Kapton at the cryogenic operation temperature (5-10 K) of the superconducting magnets, additional irradiation experiments were performed at the Grand Accelerateur National d' Ions Lourds (GANIL, France) focusing on the online analysis of the outgassing process of small volatile degradation fragments. The investigations of the electrical properties analysed by dielectric relaxation spectroscopy exhibit a different trend: high fluence irradiations with light ions (e.g. Ti) lead to a slight increase of the conductivity, whereas heavy ions (e.g. Sm, Au) cause a drastic change already in the fluence regime of nonoverlapping tracks (5 x 10 10 ions/cm 2 ). Online analysis of the outgassing process during irradiation at cryogenic temperatures shows the release of a variety of small gaseous molecules (e.g. CO, CO 2 , and short hydro carbons). Also a small amount of large polymer fragments is identified. The results allow the following conclusions which are of special interest for the application of Kapton as insulating material in a high-energetic particle radiation environment. a) The material degradation measured with the optical spectroscopy and tensile strength tests are scalable with the dose deposited by the ions. The high correlation of the results allows the prediction of the mechanical degradation with the simple and non-destructive infrared spectroscopy. The degradation curve points to a critical material degradation which

  20. Study of the degradation process of polyimide induced by high energetic ion irradiation

    Energy Technology Data Exchange (ETDEWEB)

    Severin, Daniel

    2008-09-19

    The dissertation focuses on the radiation hardness of Kapton under extreme radiation environment conditions. To study ion-beam induced modifications, Kapton foils were irradiated at the GSI linear accelerator UNILAC using several projectiles (e.g. Ti, Mo, Au, and U) within a large fluence regime (1 x 10{sup 10}-5 x 10{sup 12} ions/cm{sup 2}). The irradiated Kapton foils were analysed by means of infrared and UV/Vis spectroscopy, tensile strength measurement, mass loss analysis, and dielectric relaxation spectroscopy. For testing the radiation stability of Kapton at the cryogenic operation temperature (5-10 K) of the superconducting magnets, additional irradiation experiments were performed at the Grand Accelerateur National d' Ions Lourds (GANIL, France) focusing on the online analysis of the outgassing process of small volatile degradation fragments. The investigations of the electrical properties analysed by dielectric relaxation spectroscopy exhibit a different trend: high fluence irradiations with light ions (e.g. Ti) lead to a slight increase of the conductivity, whereas heavy ions (e.g. Sm, Au) cause a drastic change already in the fluence regime of nonoverlapping tracks (5 x 10{sup 10} ions/cm{sup 2}). Online analysis of the outgassing process during irradiation at cryogenic temperatures shows the release of a variety of small gaseous molecules (e.g. CO, CO{sub 2}, and short hydro carbons). Also a small amount of large polymer fragments is identified. The results allow the following conclusions which are of special interest for the application of Kapton as insulating material in a high-energetic particle radiation environment. a) The material degradation measured with the optical spectroscopy and tensile strength tests are scalable with the dose deposited by the ions. The high correlation of the results allows the prediction of the mechanical degradation with the simple and non-destructive infrared spectroscopy. The degradation curve points to a

  1. The production of Higgs bosons in high-energetic heavy-ion collisions

    International Nuclear Information System (INIS)

    Vidovic, M.

    1991-09-01

    The aim of this diploma thesis was to produce the Higgs boson in high-energetic, peripheral heavy-ion collisions by purely electromagnetic processes. In order to take only peripheral collisions into consideration and to avoid the strong hadronic background of central collisions the equivalent-photon method for the case of the Higgs boson was extended concerning an impact-parameter study. By this it was possible to exclude the contribution of central collisions by cut in the impact parameter at b=2R, in order to determine thus the production rate for purely peripheral collisions. (orig./HSI) [de

  2. Interchannel interactions in high-energetic radiationless transitions of neon-like ions

    International Nuclear Information System (INIS)

    Fritzsche, S.; Zschornack, G.; Musiol, G.; Soff, G.

    1990-07-01

    Relativistic K-LL Auger transition rates in intermediate coupling including interchannel interactions are presented for nine ions in the neon-isoelectronic sequence up to uranium. For neutral neon a comparison with experimental data is given. We demonstrate for the first time, that intercontinuum interactions result in a remarkable redistribution of individual transition rates even in high-energetic transitions. For instance, channel mixing shifts the K-L 1 L 1 rate by about 4% and the K-L 3 L 3 (J = 0) rate by about 11% in neon-like uranium, while total Auger rates are almost not affected. (orig.)

  3. Ion irradiation-induced stress relaxation in thin films and multilayers deposited using energetic PVD techniques

    International Nuclear Information System (INIS)

    Abadias, Gregory; Michel, Anny; Debelle, Aurelien; Jaouen, Christiane; Djemia Philippe

    2009-01-01

    The aim of the present work is to understand the stress build-up during energetic PVD film growth and the stress relaxation during subsequent ion irradiation at low dose (typically in the range 0.1-1.0 displacement per atom). Monolithic Mo thin films and Mo/Ni multilayers were grown using Dual Ion Beam Sputtering and Magnetron Sputtering at room temperature. Due to the high energy of incoming species (sputtered atoms, backscattered Ar), growth defects of interstitial-type are created during growth. The defect density can reach up to 1.4 % (far from equilibrium) in these Mo refractory layers. These defects act as misfitting particles, inducing a hydrostatic stress component and an associated in-plane compressive stress component. However, after Ar ion irradiation at low dose (∼0.2 dpa), most of the stress is relieved, showing that the growth induced defects are highly unstable. For Ni layers, the compressive stress is much lower due to the higher bulk atom mobility in this metal, making annihilation of defects more effective. An intermixing occurring mainly at the Mo/Ni interfaces is revealed from a complete strain-stress analysis using X-ray Diffraction. The magnitude of this interfacial alloying is found to increase with the energetics of the PVD process and is at the origin of the huge softening of the C 4 4 elastic constant, as measured using Brillouin light scattering. (authors)

  4. Measurements of energetic helium-3 minority distributions during ion cyclotron radiofrequency heating in the Princeton large torus

    International Nuclear Information System (INIS)

    Hammett, G.W.; Kaita, R.; Wilson, J.R.

    1988-01-01

    Ion cyclotron radiofrequency heating experiments were performed with a 3 He minority ion species in a 4 He majority plasma in the Princeton Large Torus. The energetic 3 He ion 'tail' was measured directly with a charge exchange neutral analyser for the first time. Comparisons with bounce averaged quasi-linear calculations suggest a modestly peaked radiofrequency power deposition profile. The double charge exchange process 3 He ++ + 4 He o -> 3 He o + 4 He ++ demonstrated in these measurements may be useful as part of an alpha particle diagnostic in a fusion reactor experiment. (author). 21 refs, 4 figs

  5. The composition of heavy ions in solar energetic particle events

    International Nuclear Information System (INIS)

    Fan, C.Y.

    1984-01-01

    The composition within individual SEP events may vary both with time and energy, and will in general be different from that in other SEP events. Average values of relative abundances measured in a large number of SEP events, however, are found to be roughly energy independent in the proportional1 to proportional20 MeV per nucleon range, and show a systematic deviation from photospheric abundances which seems to be organized in terms of the first ionization potential of the ion. Direct measurements of the charge states of SEPs have revealed the surprisingly common presence of energetic He + along with heavy ions with typically coronal ionization states. High-resolution measurements of isotopic abundance ratios in a small number of SEP events show these to be consistent with the universal composition except for the puzzling overabundance of the SEP 22 Ne/ 20 Ne relative to this isotopes ratio in the solar wind. The broad spectrum of observed elemental abundance variations, which in their extreme result in composition anomalies characteristic of 3 He-rich, heavy-ion rich and carbon-poor SEP events, along with direct measurements of the ionization states of SEPs provide essential information on the physical characteristics of, and conditions in the source regions, as well as important constraints to possible models for SEP production. (orig./HM)

  6. Electron–Ion Intensity Dropouts in Gradual Solar Energetic Particle Events during Solar Cycle 23

    International Nuclear Information System (INIS)

    Tan, Lun C.

    2017-01-01

    Since the field-line mixing model of Giacalone et al. suggests that ion dropouts cannot happen in the “gradual” solar energetic particle (SEP) event because of the large size of the particle source region in the event, the observational evidence of ion dropouts in the gradual SEP event should challenge the model. We have searched for the presence of ion dropouts in the gradual SEP event during solar cycle 23. From 10 SEP events the synchronized occurrence of ion and electron dropouts is identified in 12 periods. Our main observational facts, including the mean width of electron–ion dropout periods being consistent with the solar wind correlation scale, during the dropout period the dominance of the slab turbulence component and the enhanced turbulence power parallel to the mean magnetic field, and the ion gyroradius dependence of the edge steepness in dropout periods, are all in support of the solar wind turbulence origin of dropout events. Also, our observation indicates that a wide longitude distribution of SEP events could be due to the increase of slab turbulence fraction with the increased longitude distance from the flare-associated active region.

  7. Electron-Ion Intensity Dropouts in Gradual Solar Energetic Particle Events during Solar Cycle 23

    Science.gov (United States)

    Tan, Lun C.

    2017-09-01

    Since the field-line mixing model of Giacalone et al. suggests that ion dropouts cannot happen in the “gradual” solar energetic particle (SEP) event because of the large size of the particle source region in the event, the observational evidence of ion dropouts in the gradual SEP event should challenge the model. We have searched for the presence of ion dropouts in the gradual SEP event during solar cycle 23. From 10 SEP events the synchronized occurrence of ion and electron dropouts is identified in 12 periods. Our main observational facts, including the mean width of electron-ion dropout periods being consistent with the solar wind correlation scale, during the dropout period the dominance of the slab turbulence component and the enhanced turbulence power parallel to the mean magnetic field, and the ion gyroradius dependence of the edge steepness in dropout periods, are all in support of the solar wind turbulence origin of dropout events. Also, our observation indicates that a wide longitude distribution of SEP events could be due to the increase of slab turbulence fraction with the increased longitude distance from the flare-associated active region.

  8. Electron–Ion Intensity Dropouts in Gradual Solar Energetic Particle Events during Solar Cycle 23

    Energy Technology Data Exchange (ETDEWEB)

    Tan, Lun C., E-mail: ltan@umd.edu [Department of Astronomy, University of Maryland, College Park, MD 20742 (United States)

    2017-09-01

    Since the field-line mixing model of Giacalone et al. suggests that ion dropouts cannot happen in the “gradual” solar energetic particle (SEP) event because of the large size of the particle source region in the event, the observational evidence of ion dropouts in the gradual SEP event should challenge the model. We have searched for the presence of ion dropouts in the gradual SEP event during solar cycle 23. From 10 SEP events the synchronized occurrence of ion and electron dropouts is identified in 12 periods. Our main observational facts, including the mean width of electron–ion dropout periods being consistent with the solar wind correlation scale, during the dropout period the dominance of the slab turbulence component and the enhanced turbulence power parallel to the mean magnetic field, and the ion gyroradius dependence of the edge steepness in dropout periods, are all in support of the solar wind turbulence origin of dropout events. Also, our observation indicates that a wide longitude distribution of SEP events could be due to the increase of slab turbulence fraction with the increased longitude distance from the flare-associated active region.

  9. Photonic guiding structures in lithium niobate crystals produced by energetic ion beams

    Science.gov (United States)

    Chen, Feng

    2009-10-01

    A range of ion beam techniques have been used to fabricate a variety of photonic guiding structures in the well-known lithium niobate (LiNbO3 or LN) crystals that are of great importance in integrated photonics/optics. This paper reviews the up-to-date research progress of ion-beam-processed LiNbO3 photonic structures and reports on their fabrication, characterization, and applications. Ion beams are being used with this material in a wide range of techniques, as exemplified by the following examples. Ion beam milling/etching can remove the selected surface regions of LiNbO3 crystals via the sputtering effects. Ion implantation and swift ion irradiation can form optical waveguide structures by modifying the surface refractive indices of the LiNbO3 wafers. Crystal ion slicing has been used to obtain bulk-quality LiNbO3 single-crystalline thin films or membranes by exfoliating the implanted layer from the original substrate. Focused ion beams can either generate small structures of micron or submicron dimensions, to realize photonic bandgap crystals in LiNbO3, or directly write surface waveguides or other guiding devices in the crystal. Ion beam-enhanced etching has been extensively applied for micro- or nanostructuring of LiNbO3 surfaces. Methods developed to fabricate a range of photonic guiding structures in LiNbO3 are introduced. Modifications of LiNbO3 through the use of various energetic ion beams, including changes in refractive index and properties related to the photonic guiding structures as well as to the materials (i.e., electro-optic, nonlinear optic, luminescent, and photorefractive features), are overviewed in detail. The application of these LiNbO3 photonic guiding structures in both micro- and nanophotonics are briefly summarized.

  10. Alfven waves and associated energetic ions downstream from Uranus

    International Nuclear Information System (INIS)

    Zhang, Ming; Belcher, J.W.; Richardson, J.D.; Smith, C.W.

    1991-01-01

    The authors report the observation of low-frequency waves in the solar wind downstream from Uranus. These waves are observed by the Voyager spacecraft for more than 2 weeks after the encounter with Uranus and are present during this period whenever the interplanetary magnetic field is oriented such that the field lines intersect the Uranian bow shock. The magnetic field and velocity components transverse to the background field are strongly correlated, consistent with the interpretation that these waves are Alfvenic and/or fast-mode waves. The waves have a spacecraft frame frequency of about 10 -3 Hz, and when first observed near the bow shock have an amplitude comparable to the background field. As the spacecraft moves farther from Uranus, the amplitude decays. The waves appear to propagate along the magnetic field lines outward from Uranus and are right-hand polarized. Theory suggests that these waves are generated in the upstream region by a resonant instability with a proton beam streaming along the magnetic field lines. The solar wind subsequently carries these waves downstream to the spacecraft location. These waves are associated with the presence of energetic (> 28 keV) ions observed by the low-energy charged particle instrument. These ions appear two days after the start of the wave activity and occur thereafter whenever the Alfven waves occur, increasing in intensity away from Uranus. The ions are argued to originate in the Uranian magnetosphere, but pitch-angle scattering in the upstream region is required to bring them downstream to the spacecraft location

  11. Discovery of energetic molecular ions (NO+ and O2+) in the storm time ring current

    International Nuclear Information System (INIS)

    Klecker, B.; Moebius, E.; Hovestadt, D.; Scholer, M.; Gloeckler, G.; Ipavich, F.M.

    1986-01-01

    A few hours after the onset of a large geomagnetic storm on September 4, 1984, energetic molecular ions in the mass range 28--32, predminantly NO + and O 2 + , have been discovered in the outer ring current at L--7. The data have been obtained with the time-of-flight spectrometer SULEICA on the AMPTE/IRM spacecraft. We find at 160 keV/e a mean abundance ratio of the molecular ions relative to O + ions of 0.031 +- 0.004. During quiet times no molecular ions are observed, the 1 sigma upper limit of the ratio derived by averaging over several quiet periods is 0.003. The observations demonstrate the injection of ionospheric plasma into the storm time ring current and the subsequent acceleration to energies of several hundred keV on a time scale of a few hours after the onset of the magnetic storm

  12. Effect of upstream ULF waves on the energetic ion diffusion at the earth's foreshock: Theory, Simulation, and Observations

    Science.gov (United States)

    Otsuka, F.; Matsukiyo, S.; Kis, A.; Hada, T.

    2017-12-01

    Spatial diffusion of energetic particles is an important problem not only from a fundamental physics point of view but also for its application to particle acceleration processes at astrophysical shocks. Quasi-linear theory can provide the spatial diffusion coefficient as a function of the wave turbulence spectrum. By assuming a simple power-law spectrum for the turbulence, the theory has been successfully applied to diffusion and acceleration of cosmic rays in the interplanetary and interstellar medium. Near the earth's foreshock, however, the wave spectrum often has an intense peak, presumably corresponding to the upstream ULF waves generated by the field-aligned beam (FAB). In this presentation, we numerically and theoretically discuss how the intense ULF peak in the wave spectrum modifies the spatial parallel diffusion of energetic ions. The turbulence is given as a superposition of non-propagating transverse MHD waves in the solar wind rest frame, and its spectrum is composed of a piecewise power-law spectrum with different power-law indices. The diffusion coefficients are then estimated by using the quasi-linear theory and test particle simulations. We find that the presence of the ULF peak produces a concave shape of the diffusion coefficient when it is plotted versus the ion energy. The results above are used to discuss the Cluster observations of the diffuse ions at the Earth's foreshock. Using the density gradients of the energetic ions detected by the Cluster spacecraft, we determine the e-folding distances, equivalently, the spatial diffusion coefficients, of ions with their energies from 10 to 32 keV. The observed e-folding distances are significantly smaller than those estimated in the past statistical studies. This suggests that the particle acceleration at the foreshock can be more efficient than considered before. Our test particle simulation explains well the small estimate of the e-folding distances, by using the observed wave turbulence spectrum

  13. Juno/JEDI observations of 0.01 to >10 MeV energetic ions in the Jovian auroral regions: Anticipating a source for polar X-ray emission

    Science.gov (United States)

    Haggerty, D. K.; Mauk, B. H.; Paranicas, C. P.; Clark, G.; Kollmann, P.; Rymer, A. M.; Bolton, S. J.; Connerney, J. E. P.; Levin, S. M.

    2017-07-01

    After a successful orbit insertion, the Juno spacecraft completed its first 53.5 day orbit and entered a very low altitude perijove with the full scientific payload operational for the first time on 27 August 2016. The Jupiter Energetic particle Detector Instrument measured ions and electrons over the auroral regions and through closest approach, with ions measured from 0.01 to >10 MeV, depending on species. This report focuses on the composition of the energetic ions observed during the first perijove of the Juno mission. Of particular interest are the ions that precipitate from the magnetosphere onto the polar atmosphere and ions that are accelerated locally by Jupiter's powerful auroral processes. We report preliminary findings on the spatial variations, species, including energy and pitch angle distributions throughout the prime science region during the first orbit of the Juno mission. The prime motivation for this work was to examine the heavy ions that are thought to be responsible for the observed polar X-rays. Jupiter Energetic particle Detector Instrument (JEDI) did observe precipitating heavy ions with energies >10 MeV, but for this perijove the intensities were far below those needed to account for previously observed polar X-ray emissions. During this survey we also found an unusual signal of ions between oxygen and sulfur. We include here a report on what appears to be a transitory observation of magnesium, or possibly sodium, at MeV energies through closest approach.

  14. Controllable fabrication of amorphous Si layer by energetic cluster ion bombardment

    Czech Academy of Sciences Publication Activity Database

    Lavrentiev, Vasyl; Vorlíček, Vladimír; Dejneka, Alexandr; Chvostová, Dagmar; Jäger, Aleš; Vacík, Jiří; Jastrabík, Lubomír; Naramoto, H.; Narumi, K.

    2013-01-01

    Roč. 98, SI (2013), s. 49-55 ISSN 0042-207X R&D Projects: GA ČR(CZ) GBP108/12/G108 Institutional support: RVO:68378271 ; RVO:61389005 Keywords : energetic cluster s * silicon * surface modification * amorphization * nanostructure * Raman scattering * ion channeling Subject RIV: BG - Nuclear, Atomic and Molecular Physics, Colliders; BM - Solid Matter Physics ; Magnetism (FZU-D) Impact factor: 1.426, year: 2013 http://ac.els-cdn.com/S0042207X13001759/1-s2.0-S0042207X13001759-main.pdf?_tid=04e9c946-21dd-11e3-b076-00000aacb361&acdnat=1379672070_859355b2850a09ac74bc8ff413e35dda

  15. A unified theory of resonant excitation of kinetic ballooning modes by energetic ions/alpha particles in tokamaks

    International Nuclear Information System (INIS)

    Biglari, H.; Chen, L.

    1991-10-01

    A complete theory of wave-particle interactions is presented whereby both circulating and trapped energetic ions can destabilize kinetic ballooning modes in tokamaks. Four qualitatively different types of resonances, involving wave-precessional drift, wave-transit, wave-bounce, and precessional drift-bounce interactions, are identified, and the destabilization potential of each is assessed. For a characteristic slowing-down distribution function, the dominant interaction is that which taps those resonant ions with the highest energy. Implications of the theory for present and future generation fusion experiments are discussed. 16 refs

  16. Streaming reversal of energetic particles in the magnetetail during a substorm

    International Nuclear Information System (INIS)

    Lui, A.T.Y.; Williams, D.J.; Eastman, T.E.; Frank, L.A.; Akasofu, S.

    1984-01-01

    Reversal from tailward streaming to earthward streaming of energetic ions at 0.29--0.50 MeV during a substorm on February 3, 1978, is studied with measurements of energetic particles, plasma, and magnetic field from that IMP 8 spacecraft near the dusk flank of the magnetotail. Four new features emerge when high time resolution data are examined in detail. The times of reversal from tailward to earthward streaming of energetic ions and from tailward to earthward plasma flow do not coincide. Second, the velocity distribution in the tailward flowing plasma has a cresent shape, whereas the velocity distribution in the earthward flowing plasma has a crescent shape, whereas the velocity distribution in the earthward flowing plasma resembles a convecting Maxwellian. Third, tailward streaming of energetic ions is sometime detected in northward magnetic field regions and conversely, earthward streaming in southward field environments. Fourth, energetic ions scattering earthward are occasionally present in conjunction with a strong tailward streaming population in the same energy range. These new features suggest that the streaming reversal of energetic ions and the plasma flow reversal in this event are due to the spacecraft traversing different plasma regions during the substorm-associated configurational change of the plasma sheet and the magnetotail and is unrelated to the motion of an acceleration region such as an X type neutral line moving past the spacecraft

  17. Practical macromolecular cryocrystallography

    Energy Technology Data Exchange (ETDEWEB)

    Pflugrath, J. W., E-mail: jim.pflugrath@gmail.com [Rigaku Americas Corp., 9009 New Trails Drive, The Woodlands, TX 77381 (United States)

    2015-05-27

    Current methods, reagents and experimental hardware for successfully and reproducibly flash-cooling macromolecular crystals to cryogenic temperatures for X-ray diffraction data collection are reviewed. Cryocrystallography is an indispensable technique that is routinely used for single-crystal X-ray diffraction data collection at temperatures near 100 K, where radiation damage is mitigated. Modern procedures and tools to cryoprotect and rapidly cool macromolecular crystals with a significant solvent fraction to below the glass-transition phase of water are reviewed. Reagents and methods to help prevent the stresses that damage crystals when flash-cooling are described. A method of using isopentane to assess whether cryogenic temperatures have been preserved when dismounting screened crystals is also presented.

  18. Accelerator Tests of the Prototype Energetic Heavy Ion Sensor (EHIS) for GOES-R

    Science.gov (United States)

    Connell, J. J.; Lopate, C.; McKibben, R. B.

    2010-12-01

    The Energetic Heavy Ion Sensor (EHIS) is part of the Space Environmental In-Situ Suite (SEISS) for the Geostationary Operational Environment Satellite series R (GOES-R) program. It will measure energetic protons from 10-200 MeV and ions through nickel (Z=28) with similar penetrating power. By use of an Angle Detecting Inclined Sensor (ADIS) system, EHIS achieves single element resolution with extensive on-board event processing. A prototype or "brass-board" instrument, fully functional but not intended for environmental testing, has been completed. In November of 2009, we exposed the prototype to protons at Massachusetts General Hospital (MGH) and in March of 2010, we exposed it to Ni primary and fragment beams at the National Superconducting Cyclotron Laboratory's (NSCL) Coupled Cyclotron Facility (CCF). In both cases, the instrument was rotated over a range of angles and a moving degrader spread the energy from full beam energy to zero energy. We will present results of these tests. These show an angular resolution for the prototype which results in a one sigma charge resolution of ~0.25 e at Ni. The prototype also demonstrated the capability for calculating the charge of 2500 events per second with its internal processor, accumulating those events in on-board charge histograms, and thus providing unprecedented statistics in high flux conditions. The EHIS represents a major advance in capabilities for operational space weather instruments while also providing data quality suitable for scientific research. The EHIS instrument development project was funded by NASA under contract NNG06HX01C.

  19. Radiation effects of energetic thorium ions in monocrystalline Mg O and Si O2

    International Nuclear Information System (INIS)

    Abuassy, M.K.

    1995-01-01

    Radiation effects of energetic thorium ions in the energy range ∼ (100-1200) eV in both Mg O and Si O 2 single crystal have been investigated with program MARLOWE which simulate the collision cascades using the binary collision approximation. The effect of binding parameters on the radiation effects have been studied. The calculations covered the range, energy loss and Frenkel pair production. The results of MARLOWE have been compared with results of program TRIM and with the energy-partition theory of lindhard

  20. Energetic particles at venus: galileo results.

    Science.gov (United States)

    Williams, D J; McEntire, R W; Krimigis, S M; Roelof, E C; Jaskulek, S; Tossman, B; Wilken, B; Stüdemann, W; Armstrong, T P; Fritz, T A; Lanzerotti, L J; Roederer, J G

    1991-09-27

    At Venus the Energetic Particles Detector (EPD) on the Galileo spacecraft measured the differential energy spectra and angular distributions of ions >22 kiloelectron volts (keV) and electrons > 15 keV in energy. The only time particles were observed by EPD was in a series of episodic events [0546 to 0638 universal time (UT)] near closest approach (0559:03 UT). Angular distributions were highly anisotropic, ordered by the magnetic field, and showed ions arriving from the hemisphere containing Venus and its bow shock. The spectra showed a power law form with intensities observed into the 120- to 280-keV range. Comparisons with model bow shock calculations show that these energetic ions are associated with the venusian foreshock-bow shock region. Shock-drift acceleration in the venusian bow shock seems the most likely process responsible for the observed ions.

  1. Studies of energetic-ion-driven MHD instabilities in helical plasmas with low magnetic shear

    International Nuclear Information System (INIS)

    Yamamoto, S.; Ascasibar, E.; Jimenez-Gomez, R.

    2012-11-01

    We discuss the features of energetic-ion-driven MHD instabilities such as Alfvén eigenmodes (AEs) in three-dimensional magnetic configuration with low magnetic shear and low toroidal field period number (N p ) that are characteristic of advanced helical plasmas. Comparison of experimental and numerical studies in Heliotron J with those in TJ-II indicates that the most unstable AE is global AE (GAE) in low magnetic shear configuration in spite of the iota and the helicity-induced AE (HAE) is also the most unstable AE in the high iota configuration. (author)

  2. High energy ions and energetic plasma irradiation effects on aluminum in a Filippov-type plasma focus

    Energy Technology Data Exchange (ETDEWEB)

    Roshan, M.V. [National Institute of Education, Nanyang Technological University, 1 Nanyang Walk, Singapore 637616 (Singapore)], E-mail: mroshan20@yahoo.com; Rawat, R.S. [National Institute of Education, Nanyang Technological University, 1 Nanyang Walk, Singapore 637616 (Singapore); Babazadeh, A.R.; Emami, M.; Sadat Kiai, S.M. [Plasma Physics Research Center, AEOI, 14155-1339 Tehran (Iran, Islamic Republic of); Verma, R.; Lin, J.J.; Talebitaher, A.R.; Lee, P.; Springham, S.V. [National Institute of Education, Nanyang Technological University, 1 Nanyang Walk, Singapore 637616 (Singapore)

    2008-12-30

    High energy ions and energetic plasma irradiation of aluminum cathode inserts have been accomplished in nitrogen and argon filled plasma focus device. The Filippov-type plasma focus facility, Dena, with 288 {mu}F capacitor bank and charging voltage of 25 kV (90 kJ maximum storage energy) was first optimized for strong ion beam generation for nitrogen and argon gases by maximizing hard X-ray emission efficiency. X-ray diffraction analysis as well as scanning electron microscopy along with energy dispersive X-ray spectroscopy carried out to study the structural, morphological and compositional profile of the treated samples. Change in preferred orientation, emergence of meta-stable phases, generation of copper micro-droplets, and production of cracks across the sample are demonstrated and discussed. The micro-hardness measurements in Vickers scale reveal that after ion irradiation, the surface hardness of samples is reduced.

  3. Dendrimer-based Macromolecular MRI Contrast Agents: Characteristics and Application

    Directory of Open Access Journals (Sweden)

    Hisataka Kobayashi

    2003-01-01

    Full Text Available Numerous macromolecular MRI contrast agents prepared employing relatively simple chemistry may be readily available that can provide sufficient enhancement for multiple applications. These agents operate using a ~100-fold lower concentration of gadolinium ions in comparison to the necessary concentration of iodine employed in CT imaging. Herein, we describe some of the general potential directions of macromolecular MRI contrast agents using our recently reported families of dendrimer-based agents as examples. Changes in molecular size altered the route of excretion. Smaller-sized contrast agents less than 60 kDa molecular weight were excreted through the kidney resulting in these agents being potentially suitable as functional renal contrast agents. Hydrophilic and larger-sized contrast agents were found better suited for use as blood pool contrast agents. Hydrophobic variants formed with polypropylenimine diaminobutane dendrimer cores created liver contrast agents. Larger hydrophilic agents are useful for lymphatic imaging. Finally, contrast agents conjugated with either monoclonal antibodies or with avidin are able to function as tumor-specific contrast agents, which also might be employed as therapeutic drugs for either gadolinium neutron capture therapy or in conjunction with radioimmunotherapy.

  4. Macromolecular crystallography using synchrotron radiation

    International Nuclear Information System (INIS)

    Bartunik, H.D.; Phillips, J.C.; Fourme, R.

    1982-01-01

    The use of synchrotron X-ray sources in macromolecular crystallography is described. The properties of synchrotron radiation relevant to macromolecular crystallography are examined. The applications discussed include anomalous dispersion techniques, the acquisition of normal and high resolution data, and kinetic studies of structural changes in macromolecules; protein data are presented illustrating these applications. The apparatus used is described including information on the electronic detectors, the monitoring of the incident beam and crystal cooling. (U.K.)

  5. Transport, charge exchange and loss of energetic heavy ions in the earth's radiation belts - Applicability and limitations of theory

    Science.gov (United States)

    Spjeldvik, W. N.

    1981-01-01

    Computer simulations of processes which control the relative abundances of ions in the trapping regions of geospace are compared with observations from discriminating ion detectors. Energy losses due to Coulomb collisions between ions and exospheric neutrals are considered, along with charge exchange losses and internal charge exchanges. The time evolution of energetic ion fluxes of equatorially mirroring ions under radial diffusion is modelled to include geomagnetic and geoelectric fluctutations. Limits to the validity of diffusion transport theory are discussed, and the simulation is noted to contain provisions for six ionic charge states and the source effect on the radiation belt oxygen ion distributions. Comparisons are made with ion flux data gathered on Explorer 45 and ISEE-1 spacecraft and results indicate that internal charge exchanges cause the radiation belt ion charge state to be independent of source charge rate characteristics, and relative charge state distribution is independent of the radially diffusive transport rate below the charge state redistribution zone.

  6. Physics with energetic radioactive ion beams

    International Nuclear Information System (INIS)

    Henning, W.F.

    1996-01-01

    Beams of short-lived, unstable nuclei have opened new dimensions in studies of nuclear structure and reactions. Such beams also provide key information on reactions that take place in our sun and other stars. Status and prospects of the physics with energetic radioactive beams are summarized

  7. Interplay of energetic ions and Alfven modes in helical plasmas

    International Nuclear Information System (INIS)

    Kolesnichenko, Ya.I.; Lutsenko, V.V.; Yakovenko, Yu.Y.; Yamazaki, K.; Nakajima, N.; Narushima, Y.; Toi, K.; Yamamoto, S.

    2003-08-01

    Alfven eigenmodes and their destabilization by energetic ions in stellarators, mainly, in the Large Helical Device (LHD) plasmas, are considered. A general expression for the instability growth rate is derived, which generalizes that obtained in Ref. [Ya.I. Kolesnichenko et al., Phys. Plasmas 9, 517 (2002)] by taking into account the finite magnitude of the perturbed longitudinal magnetic field. The structures of the Alfven continuum and Alfven eigenmodes, as well as the resonances of the wave-particle interaction, are studied. A numerical simulation of the destabilization of Alfven waves with low mode numbers during neutral-beam injection in a particular LHD shot is carried out. The obtained solutions represent even and odd core-localized Toroidicity-induced Alfven Eigenmodes, the calculated frequencies and the mode numbers being in agreement with experimental data. The growth rates of the instabilities are calculated. This work was done during the stay of Ya.I. Kolesnichenko in NIFS as a Guest Professor from January 26, 2003 to April 25, 2003. (author)

  8. Energetic ion excited long-lasting ``sword'' modes in tokamak plasmas with low magnetic shear

    Science.gov (United States)

    Wang, Xiaogang; Zhang, Ruibin; Deng, Wei; Liu, Yi

    2013-10-01

    An m/ n = 1 mode driven by trapped fast ions with a sword-shape envelope of long-lasting (for hundreds of milliseconds) magnetic perturbation signals, other than conventional fishbones, is studied in this paper. The mode is usually observed in low shear plasmas. Frequency and growth rate of the mode and its harmonics are calculated and in good agreements with observations. The radial mode structure is also obtained and compared with that of fishbones. It is found that due to fast ion driven the mode differs from magnetohydrodynamic long lived modes (LLMs) observed in MAST and NSTX. On the other hand, due to the feature of weak magnetic shear, the mode is also significantly different from fishbones. The nonlinear evolution of the mode and its comparison with fishbones are further investigated to analyze the effect of the mode on energetic particle transport and confinement.

  9. Role of Helium-Hydrogen ratio on energetic interchange mode behaviour and its effect on ion temperature and micro-turbulence in LHD

    Science.gov (United States)

    Michael, C. A.; Tanaka, K.; Akiyama, T.; Ozaki, T.; Osakabe, M.; Sakakibara, S.; Yamaguchi, H.; Murakami, S.; Yokoyama, M.; Shoji, M.; Vyacheslavov, L. N.; LHD Experimental Group

    2018-04-01

    In the Large helical device, a change of energetic particle mode is observed as He concentration is varied in ion-ITB type experiments, having constant electron density and input heating power but with a clear increase of central ion temperature in He rich discharges. This activity consists of bursty, but damped energetic interchange modes (EICs, Du et al 2015 Phys. Rev. Lett. 114 155003), whose occurrence rate is dramatically lower in the He-rich discharges. Mechanisms are discussed for the changes in drive and damping of the modes with He concentration. These EIC bursts consist of marked changes in the radial electric field, which is derived from the phase velocity of turbulence measured with the 2D phase contrast imaging (PCI) system. Similar bursts are detected in edge fast ion diagnostics. Ion thermal transport by gyro-Bohm scaling is recognised as a contribution to the change in ion temperature, though fast ion losses by these EIC modes may also contribute to the ion temperature dependence on He concentration, most particularly controlling the height of an ‘edge-pedestal’ in the Ti profile. The steady-state level of fast ions is shown to be larger in helium rich discharges on the basis of a compact neutral particle analyser (CNPA), and the fast-ion component of the diamagnetic stored energy. These events also have an influence on turbulence and transport. The large velocity shear induced produced during these events transiently improves confinement and suppresses turbulence, and has a larger net effect when bursts are more frequent in hydrogen discharges. This exactly offsets the increased gyro-Bohm related turbulence drive in hydrogen which results in the same time-averaged turbulence level in hydrogen as in helium.

  10. Macromolecular crystallization in microgravity

    International Nuclear Information System (INIS)

    Snell, Edward H; Helliwell, John R

    2005-01-01

    Density difference fluid flows and sedimentation of growing crystals are greatly reduced when crystallization takes place in a reduced gravity environment. In the case of macromolecular crystallography a crystal of a biological macromolecule is used for diffraction experiments (x-ray or neutron) so as to determine the three-dimensional structure of the macromolecule. The better the internal order of the crystal then the greater the molecular structure detail that can be extracted. It is this structural information that enables an understanding of how the molecule functions. This knowledge is changing the biological and chemical sciences, with major potential in understanding disease pathologies. In this review, we examine the use of microgravity as an environment to grow macromolecular crystals. We describe the crystallization procedures used on the ground, how the resulting crystals are studied and the knowledge obtained from those crystals. We address the features desired in an ordered crystal and the techniques used to evaluate those features in detail. We then introduce the microgravity environment, the techniques to access that environment and the theory and evidence behind the use of microgravity for crystallization experiments. We describe how ground-based laboratory techniques have been adapted to microgravity flights and look at some of the methods used to analyse the resulting data. Several case studies illustrate the physical crystal quality improvements and the macromolecular structural advances. Finally, limitations and alternatives to microgravity and future directions for this research are covered. Macromolecular structural crystallography in general is a remarkable field where physics, biology, chemistry and mathematics meet to enable insight to the fundamentals of life. As the reader will see, there is a great deal of physics involved when the microgravity environment is applied to crystallization, some of it known, and undoubtedly much yet to

  11. Energetics and dynamics of the neutralization of clustered ions in ammonia and water vapour

    International Nuclear Information System (INIS)

    Sennhauser, E.S.; Armstrong, D.A.

    1978-01-01

    The energetics and dynamics of neutralization reactions of clustered ions in ammonia and water vapour have been analysed. Neutralization rate coefficients were calculated for the ions in ammonia and for H + .(H 2 O)sub(n) combining with various clustered anions in water vapour up to densities of 4 x 10 19 molecule cm -3 at 390 K. In the case of ammonia, calculations were also performed at 298 K. For all systems, fractional contributions of the neutralization coefficients for specific cluster sizes to the overall coefficient αsub(eff) were evaluated. The computed value of αsub(eff) for NH 3 was in reasonable agreement with experimental data in the [NH 3 ] range 0.3 to 4 x 10 19 molecule cm -3 , and general trends stemming from the effects of increasing ion mass were pointed out. Calculations of energies of individual cluster sizes indicate possible neutralization reaction mechanisms. With some exception, proton transfer is the only possible path and no H atoms should be formed. This is in general agreement with literature results for water vapour at approximately 390 K and with [H 2 O] >= 2 x 10 x 10 19 molecule cm -3 . (author)

  12. Investigation of the imaging properties of inorganic scintillation screens using high energetic ion beams

    Energy Technology Data Exchange (ETDEWEB)

    Lieberwirth, Alice [TU Darmstadt (Germany); JWG Universitaet Frankfurt/Main (Germany); Forck, Peter; Sieber, Thomas [GSI Darmstadt (Germany); Ensinger, Wolfgang; Lederer, Stephan [TU Darmstadt (Germany); Kester, Oliver [JWG Universitaet Frankfurt/Main (Germany)

    2016-07-01

    Inorganic scintillation screens are a common diagnostics tool in heavy ion accelerators. In order to investigate the imaging properties of various screen materials, four different material compositions were irradiated at GSI, using protons up to Uranium ions as projectiles. Beams were extracted from SIS18 with high energy (300 MeV/u) in slow and fast extraction mode. During irradiation the scintillation response of the screens was simultaneously recorded by two different optical setups to investigate light output, profile characteristics and emission spectra. It was observed, that fast extracted beams induce in general lower light output than slow extracted beams, while the light output per deposited energy decreases with atomic number. The analysis of the spectral emission as well as investigations with classical optical methods showed no significant defect-building in all materials, not even under irradiation with increasing beam intensity or over long time periods. The investigated scintillation screens can be considered as stable under irradiation with high energetic heavy ion pulses and are appropriate for beam diagnostics applications in future accelerator facilities like FAIR. Characteristic properties and application areas of the screens are presented in the poster.

  13. Comparison between radical- and energetic ion-induced growth of SiCxNy films in plasma immersion ion implantation and deposition

    International Nuclear Information System (INIS)

    Afanasyev-Charkin, I.V.; Nastasi, M.

    2004-01-01

    Ternary SiC x N y compounds are materials with some remarkable properties such as high oxidation resistance and high hardness. In this work we compare the properties of SiC x N y films obtained using radio-frequency (rf) and pulsed glow discharge (PGD) plasmas with combinations of SiH 4 , C 2 H 2 , N 2 , and Ar source gases. The pulsed voltage used for the rf deposition was 200 V and for the PGD deposition it was 4 kV. During the rf growth, the growth takes place mostly by attaching neutral radicals to form chemical bonds. In the PGD method, the deposition takes place by subplantation and surface activation by energetic ions. We show that in the case of low-energy RF deposition, a high relative number of C-N bonds with sp 3 hybridization is formed and very few Si-C bonds can be observed. Apparently the growth of carbon nitride and silicon nitride networks takes place independently. This indicates that SiH 3 radicals attach to the dangling bonds of silicon and nitrogen, whereas C 2 H radicals attach to the dangling bonds of carbon and nitrogen. During pulsed glow discharge deposition, bonds between all three components are formed apparently by means of subplantation and damage-induced disorder. The hardness of the PGD films exceed that of the RF films, showing that to form a dense SiC x N y film one has to either supply energy during the growth of the films by heating the substrate, as in the case of chemical vapor deposition or by using energetic ions

  14. Energetic-particle-driven instabilities and induced fast-ion transport in a reversed field pinch

    International Nuclear Information System (INIS)

    Lin, L.; Brower, D. L.; Ding, W. X.; Anderson, J. K.; Capecchi, W.; Eilerman, S.; Forest, C. B.; Koliner, J. J.; Nornberg, M. D.; Reusch, J.; Sarff, J. S.; Liu, D.

    2014-01-01

    Multiple bursty energetic-particle (EP) driven modes with fishbone-like structure are observed during 1 MW tangential neutral-beam injection in a reversed field pinch (RFP) device. The distinguishing features of the RFP, including large magnetic shear (tending to add stability) and weak toroidal magnetic field (leading to stronger drive), provide a complementary environment to tokamak and stellarator configurations for exploring basic understanding of EP instabilities. Detailed measurements of the EP mode characteristics and temporal-spatial dynamics reveal their influence on fast ion transport. Density fluctuations exhibit a dynamically evolving, inboard-outboard asymmetric spatial structure that peaks in the core where fast ions reside. The measured mode frequencies are close to the computed shear Alfvén frequency, a feature consistent with continuum modes destabilized by strong drive. The frequency pattern of the dominant mode depends on the fast-ion species. Multiple frequencies occur with deuterium fast ions compared to single frequency for hydrogen fast ions. Furthermore, as the safety factor (q) decreases, the toroidal mode number of the dominant EP mode transits from n=5 to n=6 while retaining the same poloidal mode number m=1. The transition occurs when the m=1, n=5 wave-particle resonance condition cannot be satisfied as the fast-ion safety factor (q fi ) decreases. The fast-ion temporal dynamics, measured by a neutral particle analyzer, resemble a classical predator-prey relaxation oscillation. It contains a slow-growth phase arising from the beam fueling followed by a rapid drop when the EP modes peak, indicating that the fluctuation-induced transport maintains a stiff fast-ion density profile. The inferred transport rate is strongly enhanced with the onset of multiple EP modes

  15. Kinetic Simulation and Energetic Neutral Atom Imaging of the Magnetosphere

    Science.gov (United States)

    Fok, Mei-Ching H.

    2011-01-01

    Advanced simulation tools and measurement techniques have been developed to study the dynamic magnetosphere and its response to drivers in the solar wind. The Comprehensive Ring Current Model (CRCM) is a kinetic code that solves the 3D distribution in space, energy and pitch-angle information of energetic ions and electrons. Energetic Neutral Atom (ENA) imagers have been carried in past and current satellite missions. Global morphology of energetic ions were revealed by the observed ENA images. We have combined simulation and ENA analysis techniques to study the development of ring current ions during magnetic storms and substorms. We identify the timing and location of particle injection and loss. We examine the evolution of ion energy and pitch-angle distribution during different phases of a storm. In this talk we will discuss the findings from our ring current studies and how our simulation and ENA analysis tools can be applied to the upcoming TRIO-CINAMA mission.

  16. Sequential recovery of macromolecular components of the nucleolus.

    Science.gov (United States)

    Bai, Baoyan; Laiho, Marikki

    2015-01-01

    The nucleolus is involved in a number of cellular processes of importance to cell physiology and pathology, including cell stress responses and malignancies. Studies of macromolecular composition of the nucleolus depend critically on the efficient extraction and accurate quantification of all macromolecular components (e.g., DNA, RNA, and protein). We have developed a TRIzol-based method that efficiently and simultaneously isolates these three macromolecular constituents from the same sample of purified nucleoli. The recovered and solubilized protein can be accurately quantified by the bicinchoninic acid assay and assessed by polyacrylamide gel electrophoresis or by mass spectrometry. We have successfully applied this approach to extract and quantify the responses of all three macromolecular components in nucleoli after drug treatments of HeLa cells, and conducted RNA-Seq analysis of the nucleolar RNA.

  17. Structure of Energetic Particle Mediated Shocks Revisited

    International Nuclear Information System (INIS)

    Mostafavi, P.; Zank, G. P.; Webb, G. M.

    2017-01-01

    The structure of collisionless shock waves is often modified by the presence of energetic particles that are not equilibrated with the thermal plasma (such as pickup ions [PUIs] and solar energetic particles [SEPs]). This is relevant to the inner and outer heliosphere and the Very Local Interstellar Medium (VLISM), where observations of shock waves (e.g., in the inner heliosphere) show that both the magnetic field and thermal gas pressure are less than the energetic particle component pressures. Voyager 2 observations revealed that the heliospheric termination shock (HTS) is very broad and mediated by energetic particles. PUIs and SEPs contribute both a collisionless heat flux and a higher-order viscosity. We show that the incorporation of both effects can completely determine the structure of collisionless shocks mediated by energetic ions. Since the reduced form of the PUI-mediated plasma model is structurally identical to the classical cosmic ray two-fluid model, we note that the presence of viscosity, at least formally, eliminates the need for a gas sub-shock in the classical two-fluid model, including in that regime where three are possible. By considering parameters upstream of the HTS, we show that the thermal gas remains relatively cold and the shock is mediated by PUIs. We determine the structure of the weak interstellar shock observed by Voyager 1 . We consider the inclusion of the thermal heat flux and viscosity to address the most general form of an energetic particle-thermal plasma two-fluid model.

  18. Structure of Energetic Particle Mediated Shocks Revisited

    Energy Technology Data Exchange (ETDEWEB)

    Mostafavi, P.; Zank, G. P. [Department of Space Science, University of Alabama in Huntsville, Huntsville, AL 35899 (United States); Webb, G. M. [Center for Space Plasma and Aeronomic Research (CSPAR), University of Alabama in Huntsville, Huntsville, AL 35899 (United States)

    2017-05-20

    The structure of collisionless shock waves is often modified by the presence of energetic particles that are not equilibrated with the thermal plasma (such as pickup ions [PUIs] and solar energetic particles [SEPs]). This is relevant to the inner and outer heliosphere and the Very Local Interstellar Medium (VLISM), where observations of shock waves (e.g., in the inner heliosphere) show that both the magnetic field and thermal gas pressure are less than the energetic particle component pressures. Voyager 2 observations revealed that the heliospheric termination shock (HTS) is very broad and mediated by energetic particles. PUIs and SEPs contribute both a collisionless heat flux and a higher-order viscosity. We show that the incorporation of both effects can completely determine the structure of collisionless shocks mediated by energetic ions. Since the reduced form of the PUI-mediated plasma model is structurally identical to the classical cosmic ray two-fluid model, we note that the presence of viscosity, at least formally, eliminates the need for a gas sub-shock in the classical two-fluid model, including in that regime where three are possible. By considering parameters upstream of the HTS, we show that the thermal gas remains relatively cold and the shock is mediated by PUIs. We determine the structure of the weak interstellar shock observed by Voyager 1 . We consider the inclusion of the thermal heat flux and viscosity to address the most general form of an energetic particle-thermal plasma two-fluid model.

  19. First spacecraft observations of energetic particles near comet Halley

    International Nuclear Information System (INIS)

    Somogyi, A.J.; Szegoe, K.; Gringauz, K.I.

    1986-04-01

    The TUENDE-M energetic particle instrument on board of VEGA-1 detected intense fluxes of energetic (>- 40 keV) ions in the vicinity of comet Halley, at a distance of 10sup(7) km. Three regions of different ion characteristics were identified. An outer region at several 10sup(6) km contains pick up ions in the solar wind. A second region of an extent of several 10sup(5) km inside the bow shock contains the most intense fluxes, whereas the innermost region of 10sup(4) km is characterized by lower intensities and sharp spikes around closest approach (8900 km from the nucleus). (author)

  20. Energetic ions and electrons and their acceleration processes in the magnetotail

    International Nuclear Information System (INIS)

    Scholer, M.

    1984-01-01

    Observations of energetic particle fluxes in the geomagnetic tail show that these particles exhibit a bursty appearance on all time scales. Often, however, the bursty appearance is merely due to multiple entries and exits of the spacecraft into and out of the plasma sheet which always contains varying fluxes of energetic particles. Observations of the suprathermal and high-energy component of the plasma sheet are discussed, and observations are presented of energetic particle bursts in the plasma sheet proper, which may be due to a locally ongoing acceleration process. Also discussed are energetic particle phenomena occurring near the edge of the plasma sheet, either during thinning or during recovery. Some recent results from the ISEE 3 deep tail mission bearing on energetic particle acceleration are presented, and the present status of the theory of particle acceleration within the magnetotail is briefly reviewed. 40 references

  1. Energy transport by energetic electrons released during solar flares. I - Thermal versus nonthermal processes

    Science.gov (United States)

    Winglee, R. M.; Dulk, G. A.; Pritchett, P. L.

    1988-01-01

    The propagation of energetic electrons through a flaring flux tube is studied in an attempt to determine how the energy of the electrons is deposited in the flux tube. One-dimensional electrostatic particle simulations are used in the present investigation. As the energetic electrons propagate into the system, a return current of ambient plasma electrons and some of the energetic electrons is drawn into the energetic electron source. It is found that, as the ambient temperature relative to the ion temperature increases above about 3, the heated return-current electrons can excite ion-sound waves.

  2. Turbulent transport of energetic ions

    International Nuclear Information System (INIS)

    Dannert, Tilman; Hauff, Thilo; Jenko, Frank; Guenter, Sibylle

    2006-01-01

    Approaching ITER operation, the issue of anomalous transport of fast particles becomes more and more important. This is partly because the ITER heating and current drive system relies heavily on neutral beam injection. Moreover burning plasmas are heated by fast fusion α particles.Fusion α particles are characterised by a fixed energy and an isotropic velocity distribution. Therefore they have gyroradii one magnitude larger than the thermal ions. The dependency of the particle diffusion of α test particles on the Kubo number K = VExBτc/λc (VExB mean E x B velocity, τc, λc correlation time and length of the turbulent potential) is presented. For different turbulent regimes, different dependency of the diffusion on the gyroradius is found. For large Kubo numbers, the transport is found to remain constant for gyroradii up to the correlation length of the potential, whereas it is drastically reduced in the small Kubo number regime.In the second part, a model for beam ions injected along the equilibrium magnetic field is described. The beam ions are treated gyrokinetically in a self-consistent way with the equilibrium distribution function taken as a shifted Maxwellian. The implications of such a model for the Vlasov equation, the field equations, and the calculation of moments and fluxes are discussed. Linear and nonlinear results, obtained with the gyrokinetic flux tube code GENE show the existence of a new instability driven by fast beam ions. The instability has a maximum growth rate at perpendicular wave numbers of kyρs ∼ 0.15 and depends mainly on the beam velocity and the density gradient of the beam ions. This instability leads to a replacement of bulk ion particle transport by fast ion particle transport, connected to a strongly enhanced heat flux. In the presence of this instability, the turbulent particle and heat transport is dominated by fast ions

  3. The role of macromolecular stability in desiccation tolerance

    NARCIS (Netherlands)

    Wolkers, W.F.

    1998-01-01

    The work presented in this thesis concerns a study on the molecular interactions that play a role in the macromolecular stability of desiccation-tolerant higher plant organs. Fourier transform infrared microspectroscopy was used as the main experimental technique to assess macromolecular

  4. Heliospheric Observations of Energetic Particles

    Science.gov (United States)

    Summerlin, Errol J.

    2011-01-01

    Heliospheric observations of energetic particles have shown that, on long time averages, a consistent v^-5 power-law index arises even in the absence of transient events. This implies an ubiquitous acceleration process present in the solar wind that is required to generate these power-law tails and maintain them against adiabatic losses and coulomb-collisions which will cool and thermalize the plasma respectively. Though the details of this acceleration process are being debated within the community, most agree that the energy required for these tails comes from fluctuations in the magnetic field which are damped as the energy is transferred to particles. Given this source for the tail, is it then reasonable to assume that the turbulent LISM should give rise to such a power-law tail as well? IBEX observations clearly show a power-law tail of index approximately -5 in energetic neutral atoms. The simplest explanation for the origins of these ENAs are that they are energetic ions which have charge-exchanged with a neutral atom. However, this would imply that energetic ions possess a v^-5 power-law distribution at keV energies at the source of these ENAs. If the source is presumed to be the LISM, it provides additional options for explaining the, so called, IBEX ribbon. This presentation will discuss some of these options as well as potential mechanisms for the generation of a power-law spectrum in the LISM.

  5. Field dipolarization in Saturn's magnetotail with planetward ion flows and energetic particle flow bursts: Evidence of quasi-steady reconnection.

    Science.gov (United States)

    Jackman, C M; Thomsen, M F; Mitchell, D G; Sergis, N; Arridge, C S; Felici, M; Badman, S V; Paranicas, C; Jia, X; Hospodarksy, G B; Andriopoulou, M; Khurana, K K; Smith, A W; Dougherty, M K

    2015-05-01

    We present a case study of an event from 20 August (day 232) of 2006, when the Cassini spacecraft was sampling the region near 32 R S and 22 h LT in Saturn's magnetotail. Cassini observed a strong northward-to-southward turning of the magnetic field, which is interpreted as the signature of dipolarization of the field as seen by the spacecraft planetward of the reconnection X line. This event was accompanied by very rapid (up to ~1500 km s -1 ) thermal plasma flow toward the planet. At energies above 28 keV, energetic hydrogen and oxygen ion flow bursts were observed to stream planetward from a reconnection site downtail of the spacecraft. Meanwhile, a strong field-aligned beam of energetic hydrogen was also observed to stream tailward, likely from an ionospheric source. Saturn kilometric radiation emissions were stimulated shortly after the observation of the dipolarization. We discuss the field, plasma, energetic particle, and radio observations in the context of the impact this reconnection event had on global magnetospheric dynamics.

  6. Trapping and re-emission of energetic hydrogen and helium ions in materials

    International Nuclear Information System (INIS)

    Yamaguchi, Sadae

    1981-01-01

    The experimental results on the trapping and re-emission of energetic hydrogen and helium ions in materials are explained. The trapping of deuterium and helium in graphite saturates at the concentration of 10 18 ions/cm 2 . The trapping rate of hydrogen depends on the kinds of target materials. In the case of the implantation in Mo over 3 x 10 16 H/cm 2 , hydrogen is hardly trapped. On the other hand, the trapping of hydrogen in Ti, Zr and Ta which form solid solution is easily made. The hydrogen in these metals can diffuse toward the inside of metals. The deuterium retained in 316 SS decreased with time. The trapping rate reached saturation more rapidly at higher implantation temperature. The effective diffusion constant for the explanation of the re-emission process is 1/100 as small as the ordinary value. The radiation damage due to helium irradiation affects on the trapping of deuterium in Mo. The temperature dependence of the trapping rate can be explained by the diffusion model based on the Sievert's law. The re-emission of helium was measured at various temperature. At low temperature, the re-emission was low at first, then the rate increased. At high temperature, the re-emission rate was high from the beginning. (Kato, T.)

  7. Production of high-energetic photons in the heavy ion reaction 136Xe + 48Ti at ELab = 18.5 MeV/u

    International Nuclear Information System (INIS)

    Enders, G.

    1991-05-01

    The production mechanism for high-energetic photons in heavy ion collisions was studied on the example of the deep inelastic reaction 136 Xe+ 48 Ti at a projectile energy of 18.5 MeV/u in an exclusive experiment, in which photons and heavy reaction fragments were detected in coincidence. (orig.) [de

  8. Incidence Angle Effect of Energetic Carbon Ions on Deposition Rate, Topography, and Structure of Ultrathin Amorphous Carbon Films Deposited by Filtered Cathodic Vacuum Arc

    KAUST Repository

    Wang, N.; Komvopoulos, K.

    2012-01-01

    The effect of the incidence angle of energetic carbon ions on the thickness, topography, and structure of ultrathin amorphous carbon (a-C) films synthesized by filtered cathodic vacuum arc (FCVA) was examined in the context of numerical

  9. Hypothesis for the mechanism of negative ion production in the surface-plasma negative hydrogen ion source

    International Nuclear Information System (INIS)

    Hiskes, J.R.

    1975-01-01

    An analysis of the surface-plasma negative hydrogen ion source has shown that the tungsten cathode supports approximately a monolayer of cesium. The backscattering of protons from the cathode as energetic neutrals and the subsequent backscattering of these neutrals from the anode provides for a flux of energetic atoms incident upon the cathode which is comparable to the ion flux. A hypothesis is proposed for the generation of negative ions during the collision of these energetic atoms with the cathode. Several mechanisms for negative ion production by proton collision with the surface are discussed. (U.S.)

  10. A Web Resource for Standardized Benchmark Datasets, Metrics, and Rosetta Protocols for Macromolecular Modeling and Design.

    Directory of Open Access Journals (Sweden)

    Shane Ó Conchúir

    Full Text Available The development and validation of computational macromolecular modeling and design methods depend on suitable benchmark datasets and informative metrics for comparing protocols. In addition, if a method is intended to be adopted broadly in diverse biological applications, there needs to be information on appropriate parameters for each protocol, as well as metrics describing the expected accuracy compared to experimental data. In certain disciplines, there exist established benchmarks and public resources where experts in a particular methodology are encouraged to supply their most efficient implementation of each particular benchmark. We aim to provide such a resource for protocols in macromolecular modeling and design. We present a freely accessible web resource (https://kortemmelab.ucsf.edu/benchmarks to guide the development of protocols for protein modeling and design. The site provides benchmark datasets and metrics to compare the performance of a variety of modeling protocols using different computational sampling methods and energy functions, providing a "best practice" set of parameters for each method. Each benchmark has an associated downloadable benchmark capture archive containing the input files, analysis scripts, and tutorials for running the benchmark. The captures may be run with any suitable modeling method; we supply command lines for running the benchmarks using the Rosetta software suite. We have compiled initial benchmarks for the resource spanning three key areas: prediction of energetic effects of mutations, protein design, and protein structure prediction, each with associated state-of-the-art modeling protocols. With the help of the wider macromolecular modeling community, we hope to expand the variety of benchmarks included on the website and continue to evaluate new iterations of current methods as they become available.

  11. The design of macromolecular crystallography diffraction experiments

    International Nuclear Information System (INIS)

    Evans, Gwyndaf; Axford, Danny; Owen, Robin L.

    2011-01-01

    Thoughts about the decisions made in designing macromolecular X-ray crystallography experiments at synchrotron beamlines are presented. The measurement of X-ray diffraction data from macromolecular crystals for the purpose of structure determination is the convergence of two processes: the preparation of diffraction-quality crystal samples on the one hand and the construction and optimization of an X-ray beamline and end station on the other. Like sample preparation, a macromolecular crystallography beamline is geared to obtaining the best possible diffraction measurements from crystals provided by the synchrotron user. This paper describes the thoughts behind an experiment that fully exploits both the sample and the beamline and how these map into everyday decisions that users can and should make when visiting a beamline with their most precious crystals

  12. Observations of field-aligned energetic electron and ion distributions near the magnetopause at geosynchronous orbit

    International Nuclear Information System (INIS)

    Korth, A.; Kremser, G.; Daly, P.W.; Amata, E.

    1982-01-01

    On August 28, 1978, the dayside magnetopause crossed the geosynchronous satellite GEOS 2 several times during a geomagnetically disturbed period, and clear signatures of the interconnection of field lines through the magnetopause were observed. The MPAE particle spectrometer provided high time resolution observations of the distribution of energetic electrons (E>22 keV) and ions (E>27 keV). Magnetometer data were used to determine the location of GEOS 2 relative to the magnetopause. The pitch angle distributions of ions and electrons were found to be strongly asymmetric with respect to 90 0 , and the asymmetries have been interpreted in terms of field-aligned particle streaming. Evidence is provided for the first time for electron streaming inside the magnetopause which continues for many bounce periods. It is concluded that magnetospheric field lines opened, at least for brief time intervals, as a consequence of interconnection with magnetosheath field lines. Comparisons of electron spectra provide evidence that the streaming electrons observed in the magnetosheath originate in the magnetosphere

  13. Energetic magnetospheric protons in the plasma depletion layer

    International Nuclear Information System (INIS)

    Fuselier, S.A.

    1992-01-01

    Interplanetary magnetic field draping against the Earth's dayside subsolar magnetopause creates a region of reduced plasma density and increased magnetic field called the plasma depletion layer. In this region, leakage of energetic ions from the Earth's magnetosphere onto magnetic field lines in the plasma depletion layer can be studied without interference from ions accelerated at the Earth's quasi-parallel bow shock. Active Magnetospheric Particle Tracer Experiment/Charge Composition Explorer (AMPTE/CCE) observations for 13 plasma depletion layer events are used to determine the characteristics of energetic protons between a few keV/e and ∼100keV/e leaked from the magnetosphere. Results indicate that the leaked proton distributions resemble those in the magnetosphere except that they have lower densities and temperatures and much higher velocities parallel (or antiparallel) and perpendicular to the magnetic field. Compared to the low-energy magnetosheath proton distributions present in the depletion layer, the leaked energetic proton distributions typically have substantially higher flow velocities along the magnetic field indicate that the leaked energetic proton distributions to contribute to the energetic proton population seen upstream and downstream from the quasi-parallel bow shock. However, their contribution is small compared to the contribution from acceleration of protons at the bow shock because the leaked proton densities are on the order of 10 times smaller than the energetic proton densities typically observed in the vicinity of the quasi-parallel bow shock

  14. Two Azimuthally Separated Regions of Cusp Ion Injection Observed via Energetic Neutral Atoms

    Science.gov (United States)

    Abe, M.; Taguchi, S.; Collier, M. R.; Moore, T. E.

    2011-01-01

    The low-energy neutral atom (LENA) imager on the IMAGE spacecraft can detect energetic neutral atoms produced by ion injection into the cusp through a charge exchange with the Earth's hydrogen exosphere. We examined the occurrence of the LENA cusp signal during positive IMF B(sub z) in terms of the arrival direction and the IMF clock angle theta(sub CA). Results of statistical analyses show that the occurrence frequency is high on the postnoon side when theta(sub CA) is between approximately 20 degrees and approximately 50 degrees. This is ascribed to ion injection caused by cusp reconnection typical of positive IMF B(sub z). Our results also show that there is another situation of high occurrence frequency, which can be identified with theta(sub CA) of approximately 30 degrees to approximately 80 degrees. When theta(sub CA) is relatively large (60 degrees - 80 degrees), occurrence frequencies are high at relatively low latitudes over a wide extent spanning both prenoon and postnoon sectors. This feature suggests that the ion injection is caused by reconnection at the dayside magnetopause. Its postnoon side boundary shifts toward the prenoon as theta(sub CA) decreases. When theta(sub CA) is less than approximately 50 degrees, the high occurrence frequency exists well inside the prenoon sector, which is azimuthally separated from the postnoon region ascribed to cusp reconnection. The prenoon region, which is thought due to ion injection caused by dayside reconnection, may explain the recent report that proton aurora brightening occurs in the unanticipated prenoon sector of the northern high-latitude ionosphere for IMF B(sub y) greater than 0 and B(sub z) greater than 0.

  15. METHOD AND APPARATUS FOR TRAPPING IONS IN A MAGNETIC FIELD

    Science.gov (United States)

    Luce, J.S.

    1962-04-17

    A method and apparatus are described for trapping ions within an evacuated container and within a magnetic field utilizing dissociation and/or ionization of molecular ions to form atomic ions and energetic neutral particles. The atomic ions are magnetically trapped as a result of a change of charge-to- mass ratio. The molecular ions are injected into the container and into the path of an energetic carbon arc discharge which dissociates and/or ionizes a portion of the molecular ions into atomic ions and energetic neutrals. The resulting atomic ions are trapped by the magnetic field to form a circulating beam of atomic ions, and the energetic neutrals pass out of the system and may be utilized in a particle accelerator. (AEC)

  16. Studies of fast-ion transport induced by energetic particle modes using fast-particle diagnostics with high time resolution in CHS

    International Nuclear Information System (INIS)

    Isobe, M.; Toi, K.; Suzuki, C.; Nagaoka, K.; Matsushita, H.; Goto, K.

    2006-01-01

    The purpose of this work is to reveal the effects of the energetic particle mode (EPM) on fast-ion transport and consequent fast-ion loss in the Compact Helical System (CHS). For this purpose, fast particle diagnostics capable of following fast events originating from the EPM (f -5 Tesla at the magnetic probe position. The lost fast-ion probe (LIP) located at the outboard side of the torus indicates that bursting EPMs lead to periodically enhanced losses of co-going fast ions having smaller pitch angles in addition to losses of marginally co-passing fast ions. Coinciding with EPM bursts, the H- light detector viewing the peripheral region at the outboard side also shows large pulsed increases similar to that of the LIP whereas the detector viewing the peripheral region at the inboard side does not. This is also evidence that fast ions are expelled to the outboard side due to the EPM. The charge-exchange neutral particle analyzer indicates that only fast ions whose energy is close to the beam injection energy E b are strongly affected by EPM, suggesting in turn that observed EPMs are excited by fast ions having energy close to E b . (author)

  17. Macromolecular crystallography beamline X25 at the NSLS

    Energy Technology Data Exchange (ETDEWEB)

    Héroux, Annie; Allaire, Marc; Buono, Richard; Cowan, Matthew L.; Dvorak, Joseph; Flaks, Leon; LaMarra, Steven; Myers, Stuart F.; Orville, Allen M.; Robinson, Howard H.; Roessler, Christian G.; Schneider, Dieter K.; Shea-McCarthy, Grace; Skinner, John M.; Skinner, Michael; Soares, Alexei S.; Sweet, Robert M.; Berman, Lonny E., E-mail: berman@bnl.gov [Brookhaven National Laboratory, PO Box 5000, Upton, NY 11973-5000 (United States)

    2014-04-08

    A description of the upgraded beamline X25 at the NSLS, operated by the PXRR and the Photon Sciences Directorate serving the Macromolecular Crystallography community, is presented. Beamline X25 at the NSLS is one of the five beamlines dedicated to macromolecular crystallography operated by the Brookhaven National Laboratory Macromolecular Crystallography Research Resource group. This mini-gap insertion-device beamline has seen constant upgrades for the last seven years in order to achieve mini-beam capability down to 20 µm × 20 µm. All major components beginning with the radiation source, and continuing along the beamline and its experimental hutch, have changed to produce a state-of-the-art facility for the scientific community.

  18. Macromolecular crystallography beamline X25 at the NSLS

    International Nuclear Information System (INIS)

    Héroux, Annie; Allaire, Marc; Buono, Richard; Cowan, Matthew L.; Dvorak, Joseph; Flaks, Leon; LaMarra, Steven; Myers, Stuart F.; Orville, Allen M.; Robinson, Howard H.; Roessler, Christian G.; Schneider, Dieter K.; Shea-McCarthy, Grace; Skinner, John M.; Skinner, Michael; Soares, Alexei S.; Sweet, Robert M.; Berman, Lonny E.

    2014-01-01

    A description of the upgraded beamline X25 at the NSLS, operated by the PXRR and the Photon Sciences Directorate serving the Macromolecular Crystallography community, is presented. Beamline X25 at the NSLS is one of the five beamlines dedicated to macromolecular crystallography operated by the Brookhaven National Laboratory Macromolecular Crystallography Research Resource group. This mini-gap insertion-device beamline has seen constant upgrades for the last seven years in order to achieve mini-beam capability down to 20 µm × 20 µm. All major components beginning with the radiation source, and continuing along the beamline and its experimental hutch, have changed to produce a state-of-the-art facility for the scientific community

  19. Terrestrial ring current - from in situ measurements to global images using energetic neutral atoms

    International Nuclear Information System (INIS)

    Roelof, E.C.; Williams, D.J.

    1988-01-01

    Electrical currents flowing in the equatorial magnetosphere, first inferred from ground-based magnetic disturbances, are carried by trapped energetic ions. Spacecraft measurements have determined the spectrum and composition of those currents, and the newly developed technique of energetic-neutral-atom imaging allows the global dynamics of that entire ion population to be viewed from a single spacecraft. 71 references

  20. A new gamma-ray diagnostic for energetic ion distributions - The Compton tail on the neutron capture line

    International Nuclear Information System (INIS)

    Vestrand, W.T.

    1990-01-01

    This paper presents a new radiation diagnostic for assaying the energy spectrum and the angular distribution of energetic ions incident on thick hydrogen-rich thermal targets. This diagnostic compares the number of emergent photons in the narrow neutron capture line at 2.223 MeV to the number of Compton scattered photons that form a low-energy tail on the line. It is shown that the relative strength of the tail can be used as a measure of the hardness of the incident ion-energy spectrum. Application of this diagnostic to solar flare conditions is the main thrust of the work presented here. It is examined how the strength of the Compton tail varies with flare viewing angle and the angular distribution of the flare-accelerated particles. Application to compact X-ray binary systems is also briefly discussed. 39 refs

  1. Increased Throughput in Ion Channel Drug Development and Exploration by Automation of Electrophysiology

    DEFF Research Database (Denmark)

    Willumsen, N. J.

    2006-01-01

    Ion channels constitute macromolecular communication gates that are present in the membranes of all living cells. They are crucial for practically any physiological process, either as chemical or electrical signal transducers or as transmembrane routes for the bulk transport of salts. Not surpris......Ion channels constitute macromolecular communication gates that are present in the membranes of all living cells. They are crucial for practically any physiological process, either as chemical or electrical signal transducers or as transmembrane routes for the bulk transport of salts...

  2. Composition variations of low energy heavy ions during large solar energetic particle events

    Energy Technology Data Exchange (ETDEWEB)

    Ho, George C., E-mail: George.Ho@jhuapl.edu; Mason, Glenn M., E-mail: Glenn.Mason@jhuapl.edu [Johns Hopkins University Applied Physics Laboratory, Laurel, MD 20723 (United States)

    2016-03-25

    The time-intensity profile of large solar energetic particle (SEP) event is well organized by solar longitude as observed at Earth orbit. This is mostly due to different magnetic connection to the shock that is associated with large SEP event propagates from the Sun to the heliosphere. Earlier studies have shown event averaged heavy ion abundance ratios can also vary as a function of solar longitude. It was found that the Fe/O ratio for high energy particle (>10 MeV/nucleon) is higher for those western magnetically well connected events compare to the eastern events as observed at L1 by the Advanced Composition Explorer (ACE) spacecraft. In this paper, we examined the low energy (∼1 MeV/nucleon) heavy ions in 110 isolated SEP events from 2009 to the end of 2014. In addition, the optical and radio signatures for all of our events are identified and when data are available we also located the associated coronal mass ejection (CME) data. Our survey shows a higher Fe/O ratio at events in the well-connected region, while there are no corrections between the event averaged elemental composition with the associated coronal mass ejection speed. This is inconsistent with the higher energy results, but inline with other recent low-energy measurements.

  3. An investigation of collision propagation in energetic ion initiated cascades in copper

    International Nuclear Information System (INIS)

    Chakarov, I.R.; Webb, R.P.; Smith, R.; Beardmore, K.

    1995-01-01

    Using simple Binary Collision simulations of energetic ion initiated collision cascades, particles are considered to undergo a series of binary collisions with their surroundings. In Molecular Dynamics simulation it is difficult to even define what is meant by a collision as the interaction potentials are infinite in nature and consequently all particles are considered to interact with all other particles. By making a suitable definition of a collision for Molecular Dynamics we are able to compare the temporal behaviour of the number of collisions occurring during the propagation of a collision cascade between the two different calculation schemes. An investigation is made of the number of collisions as a function of time occurring in collision cascades. We compare these results to the time ordered version of MARLOWE. By making further definitions about what makes a many body collision, we further investigate the numbers of many body collisions occurring during a number of collision cascades. (orig.)

  4. Observations of Energetic Particle Escape at the Magnetopause: Early Results from the MMS Energetic Ion Spectrometer (EIS)

    Science.gov (United States)

    Cohen, I. J.; Mauk, B. H.; Anderson, B. J.; Westlake, J. H.; Sibeck, David Gary; Giles, Barbara L.; Pollock, C. J.; Turner, D. L.; Fennell, J. F.; Blake, J. B.; hide

    2016-01-01

    Energetic (greater than tens of keV) magnetospheric particle escape into the magnetosheath occurs commonly, irrespective of conditions that engender reconnection and boundary-normal magnetic fields. A signature observed by the Magnetospheric Multiscale (MMS) mission, simultaneous monohemispheric streaming of multiple species (electrons, H+, Hen+), is reported here as unexpectedly common in the dayside, dusk quadrant of the magnetosheath even though that region is thought to be drift-shadowed from energetic electrons. This signature is sometimes part of a pitch angle distribution evolving from symmetric in the magnetosphere, to asymmetric approaching the magnetopause, to monohemispheric streaming in the magnetosheath. While monohemispheric streaming in the magnetosheath may be possible without a boundary-normal magnetic field, the additional pitch angle depletion, particularly of electrons, on the magnetospheric side requires one. Observations of this signature in the dayside dusk sector imply that the static picture of magnetospheric drift-shadowing is inappropriate for energetic particle dynamics in the outer magnetosphere.

  5. Energetic proton generation in ultra-intense laser-solid interactions

    International Nuclear Information System (INIS)

    Wilks, S.C.; Langdon, A.B.; Cowan, T.E.; Roth, M.; Singh, M.; Hatchett, S.; Key, M. H.; Pennington, D.; MacKinnon, A.; Snavely, R.A.

    2001-01-01

    An explanation for the energetic ions observed in the PetaWatt experiments is presented. In solid target experiments with focused intensities exceeding 10 20 W/cm 2 , high-energy electron generation, hard bremsstrahlung, and energetic protons have been observed on the backside of the target. In this report, an attempt is made to explain the physical process present that will explain the presence of these energetic protons, as well as explain the number, energy, and angular spread of the protons observed in experiment. In particular, we hypothesize that hot electrons produced on the front of the target are sent through to the back off the target, where they ionize the hydrogen layer there. These ions are then accelerated by the hot electron cloud, to tens of MeV energies in distances of order tens of μm, whereupon they end up being detected in the radiographic and spectrographic detectors

  6. Iterative inversion of global magnetospheric ion distributions using energetic neutral atom (ENA images recorded by the NUADU/TC2 instrument

    Directory of Open Access Journals (Sweden)

    L. Lu

    2008-06-01

    Full Text Available A method has been developed for extracting magnetospheric ion distributions from Energetic Neutral Atom (ENA measurements made by the NUADU instrument on the TC-2 spacecraft. Based on a constrained linear inversion, this iterative technique is suitable for use in the case of an ENA image measurement, featuring a sharply peaked spatial distribution. The method allows for magnetospheric ion distributions to be extracted from a low-count ENA image recorded over a short integration time (5 min. The technique is demonstrated through its application to a set of representative ENA images recorded in energy Channel~2 (hydrogen: 50–81 keV, oxygen: 138–185 keV of the NUADU instrument during a geomagnetic storm. It is demonstrated that this inversion method provides a useful tool for extracting ion distribution information from ENA data that are characterized by high temporal and spatial resolution. The recovered ENA images obtained from inverted ion fluxes match most effectively the measurements made at maximum ENA intensity.

  7. Mechanistic insights into the interaction between energetic oxygen ions and nanosized ZnFe2O4: XAS-XMCD investigations.

    Science.gov (United States)

    Singh, Jitendra Pal; Kaur, Baljeet; Sharma, Aditya; Kim, So Hee; Gautam, Sanjeev; Srivastava, Ramesh Chandra; Goyal, Navdeep; Lim, Weol Cheol; Lin, H-J; Chen, J M; Asokan, K; Kanjilal, D; Won, Sung Ok; Lee, Ik-Jae; Chae, Keun Hwa

    2018-04-20

    The interactions of energetic ions with multi-cation compounds and their consequences in terms of changes in the local electronic structure, which may facilitate intriguing hybridization between O 2p and metal d orbitals and magnetic ordering, are the subject of debate and require a deep understanding of energy transfer processes and magnetic exchange mechanisms. In this study, nanocrystals of ZnFe2O4 were exposed to O7+ ions with an energy of 100 MeV to understand, qualitatively and quantitatively, the metal-ligand field interactions, cation migration and magnetic exchange interactions by employing X-ray absorption fine structure measurements and X-ray magnetic circular dichroism to get deeper mechanistic insights. Nanosized zinc ferrite nanoparticles (NPs) with a size of ∼16 nm synthesized in the cubic spinel phase exhibited deterioration of the crystalline phase when 100 MeV O7+ ions passed through them. However, the size of these NPs remained almost the same. The behaviour of crystal deterioration is associated with the confinement of heat in this interaction. The energy confined inside the nanoparticles promotes cation redistribution as well as the modification of the local electronic structure. Prior to this interaction, almost 42% of Zn2+ ions occupied AO4 tetrahedra; however, this value increased to 63% after the interaction. An inverse effect was observed for metal ion occupancies in BO6 octahedra. The L-edge spectra of Fe and Zn reveal that the spin and valence states of the metal ions were not affected by this interaction. This effect is also supported by K-edge measurements for Fe and Zn. The t2g/eg intensity ratio in the O K-edge spectra decreased after this interaction, which is associated with detachment of Zn2+ ions from the lattice. The extent of hybridization, as estimated from the ratio of the post-edge to the pre-edge region of the O K-edge spectra, decreased after this interaction. The metal-oxygen and metal-metal bond lengths were modified

  8. INTERACTION OF NEUTRAL BEAM INJECTED FAST IONS WITH ION CYCLOTRON RESONANCE FREQUENCY WAVES

    International Nuclear Information System (INIS)

    CHOI, M.; CHAN, V.S.; CHIU, S.C.; OMELCHENKO, Y.A.; SENTOKU, Y.; STJOH, H.E.

    2003-01-01

    OAK B202 INTERACTION OF NEUTRAL BEAM INJECTED FAST IONS WITH CYCLOTRON RESONANCE FREQUENCY WAVES. Existing tokamaks such as DIII-D and future experiments like ITER employ both NB injection (NBI) and ion-cyclotron resonance heating (ICRH) for auxiliary heating and current drive. The presence of energetic particles produced by NBI can result in absorption of the Ion cyclotron radio frequency (ICRF) power. ICRF can also interact with the energetic beam ions to alter the characteristics of NBI momentum deposition and resultant impact on current drive and plasma rotation. To study the synergism between NBI and ICRF, a simple physical model for the slowing-down of NB injected fast ions is implemented in a Monte-Carlo rf orbit code. This paper presents the first results. The velocity space distributions of energetic ions generated by ICRF and NBI are calculated and compared. The change in mechanical momentum of the beam and an estimate of its impact on the NB-driven current are presented and compared with ONETWO simulation results

  9. Rocket measurements of energetic particles in the midlatitude precipitation zone

    Science.gov (United States)

    Voss, H. D.; Smith, L. G.; Braswell, F. M.

    1980-01-01

    Measurements of energetic ion and electron properties as a function of altitude in the midlatitude zone of nighttime energetic particle precipitation are reported. The measurements of particle fluxes, energy spectra and pitch angle distributions were obtained by a Langmuir probe, six energetic particle spectrometers and an electrostatic analyzer on board a Nike Apache rocket launched near the center of the midlatitude zone during disturbed conditions. It is found that the incident flux was primarily absorbed rather than backscattered, and consists of mainly energetic hydrogen together with some helium and a small energetic electron component. Observed differential energy spectra of protons having an exponential energy spectrum, and pitch angle distributions at various altitudes indicate that the energetic particle flux decreases rapidly for pitch angles less than 70 deg. An energetic particle energy flux of 0.002 ergs/sq cm per sec is calculated which indicates the significance of energetic particles as a primary nighttime ionization source for altitudes between 120 and 200 km in the midlatitude precipitation zone.

  10. Macromolecular crowding directs extracellular matrix organization and mesenchymal stem cell behavior.

    Directory of Open Access Journals (Sweden)

    Adam S Zeiger

    Full Text Available Microenvironments of biological cells are dominated in vivo by macromolecular crowding and resultant excluded volume effects. This feature is absent in dilute in vitro cell culture. Here, we induced macromolecular crowding in vitro by using synthetic macromolecular globules of nm-scale radius at physiological levels of fractional volume occupancy. We quantified the impact of induced crowding on the extracellular and intracellular protein organization of human mesenchymal stem cells (MSCs via immunocytochemistry, atomic force microscopy (AFM, and AFM-enabled nanoindentation. Macromolecular crowding in extracellular culture media directly induced supramolecular assembly and alignment of extracellular matrix proteins deposited by cells, which in turn increased alignment of the intracellular actin cytoskeleton. The resulting cell-matrix reciprocity further affected adhesion, proliferation, and migration behavior of MSCs. Macromolecular crowding can thus aid the design of more physiologically relevant in vitro studies and devices for MSCs and other cells, by increasing the fidelity between materials synthesized by cells in vivo and in vitro.

  11. Macromolecular crowding directs extracellular matrix organization and mesenchymal stem cell behavior.

    Science.gov (United States)

    Zeiger, Adam S; Loe, Felicia C; Li, Ran; Raghunath, Michael; Van Vliet, Krystyn J

    2012-01-01

    Microenvironments of biological cells are dominated in vivo by macromolecular crowding and resultant excluded volume effects. This feature is absent in dilute in vitro cell culture. Here, we induced macromolecular crowding in vitro by using synthetic macromolecular globules of nm-scale radius at physiological levels of fractional volume occupancy. We quantified the impact of induced crowding on the extracellular and intracellular protein organization of human mesenchymal stem cells (MSCs) via immunocytochemistry, atomic force microscopy (AFM), and AFM-enabled nanoindentation. Macromolecular crowding in extracellular culture media directly induced supramolecular assembly and alignment of extracellular matrix proteins deposited by cells, which in turn increased alignment of the intracellular actin cytoskeleton. The resulting cell-matrix reciprocity further affected adhesion, proliferation, and migration behavior of MSCs. Macromolecular crowding can thus aid the design of more physiologically relevant in vitro studies and devices for MSCs and other cells, by increasing the fidelity between materials synthesized by cells in vivo and in vitro.

  12. Cellular radiobiology of heavy-ion beams

    International Nuclear Information System (INIS)

    Tobias, C.A.; Blakely, E.A.; Ngo, F.Q.H.; Roots, R.J.; Yang, T.C.

    1981-01-01

    Progress is reported in the following areas of this research program: relative biological effectiveness and oxygen enhancement ratio of silicon ion beams; heavy ion effects on the cell cycle; the potentiation effect (2 doses of high LET heavy-ion radiations separated by 2 to 3 hours); potentially lethal damage in actively growing cells and plateau growth cells; radiation induced macromolecular lesions and cellular radiation chemistry; lethal effects of dual radiation; and the development of a biophysical repair/misrepair model

  13. Observations of energetic helium ions in the Earth's radiation belts during a sequence of geomagnetic storms

    International Nuclear Information System (INIS)

    Spjeldvik, W.N.; Fritz, T.A.

    1981-01-01

    Every year a significant number of magnetic storms disturb the earth's magnetosphere and the trapped particle populations. In this paper, we present observations of energetic (MeV) helium ions made with Explorer 45 during a sequence of magnetic storms during June through December of 1972. The first of these storms started on June 17 and had a Dst index excursion to approx.190 gamma, and the MeV helium ions were perturbed primarily beyond 3 earth radii in the equatorial radiation belts with a typical flux increase of an order of magnitude at L = 4. The second storm period took place during August and was associated with very major solar flare activity. Although the Dst extremum was at best 35 gamma less than the June storm, this period can be characterized as irregular (or multi-storm) with strong compression of the magnetosphere and very large (order of magnitude) MeV helium ion flux enhancements down to Lapprox.2. Following this injection the trapped helium ion fluxes showed positive spectral slope with the peak beyond 3.15 MeV at L = 2.5; and at the lowest observable L shells (Lapprox.2--3) little flux decay (tau>100 days) was seen during the rest of the year. Any effects of two subsequent major magnetic storms in September and November were essentially undetectable in the prolonged after-effect of the August solar flare associated MeV helium ion injection. The helium ion radial profile of the phase space density showed a significant negative slope during this period, and we infer that radial diffusion constitutes a significant loss of helium ions on L shells above Lapprox. =4 during the aftermath of the August 1972 magnetic storm

  14. Temporally distinct response of irradiated normal human fibroblasts and their bystander cells to energetic heavy ions

    International Nuclear Information System (INIS)

    Hamada, Nobuyuki; Ni, Meinan; Funayama, Tomoo; Sakashita, Tetsuya; Kobayashi, Yasuhiko

    2008-01-01

    Ionizing radiation-induced bystander effects have been documented for a multitude of endpoints such as mutations, chromosome aberrations and cell death, which arise in nonirradiated bystander cells having received signals from directly irradiated cells; however, energetic heavy ion-induced bystander response is incompletely characterized. To address this, we employed precise microbeams of carbon and neon ions for targeting only a very small fraction of cells in confluent fibroblast cultures. Conventional broadfield irradiation was conducted in parallel to see the effects in irradiated cells. Exposure of 0.00026% of cells led to nearly 10% reductions in the clonogenic survival and twofold rises in the apoptotic incidence regardless of ion species. Whilst apoptotic frequency increased with time up to 72 h postirradiation in irradiated cells, its frequency escalated up to 24 h postirradiation but declined at 48 h postirradiation in bystander cells, indicating that bystander cells exhibit transient commitment to apoptosis. Carbon- and neon-ion microbeam irradiation similarly caused almost twofold increments in the levels of serine 15-phosphorylated p53 proteins, irrespective of whether 0.00026, 0.0013 or 0.0066% of cells were targeted. Whereas the levels of phosphorylated p53 were elevated and remained unchanged at 2 h and 6 h postirradiation in irradiated cells, its levels rose at 6 h postirradiation but not at 2 h postirradiation in bystander cells, suggesting that bystander cells manifest delayed p53 phosphorylation. Collectively, our results indicate that heavy ions inactivate clonogenic potential of bystander cells, and that the time course of the response to heavy ions differs between irradiated and bystander cells. These induced bystander responses could be a defensive mechanism that minimizes further expansion of aberrant cells

  15. Collective phenomena with energetic particles in fusion plasmas

    International Nuclear Information System (INIS)

    Breizman, B.N.; Berk, H.L.; Candy, J.

    2001-01-01

    Recent progress in the theory of collective modes driven by energetic particles, as well as interpretations of fast particle effects observed in fusion-related experiments, are described. New developments in linear theory include: (a) Alfven-mode frequency gap widening due to energetic trapped ions, (b) interpretation of JET results for plasma pressure effect on TAE modes, and (c) ''counter'' propagation of TAE modes due to trapped fast ion anisotropy. The new nonlinear results are: (a) theoretical explanation for the pitchfork splitting effect observed in TAE experiments on JET, (b) existence of coherent structures with strong frequency chirping due to kinetic instability, (c) self-consistent nonlinear theory for fishbone instabilities, and (d) intermittent quasilinear diffusion model for anomalous fast particle losses. (author)

  16. Collective phenomena with energetic particles in fusion plasmas

    International Nuclear Information System (INIS)

    Breizman, B.N.; Berk, H.L.; Candy, J.

    1999-01-01

    Recent progress in the theory of collective modes driven by energetic particles, as well as interpretations of fast particle effects observed in fusion-related experiments, are described. New developments in linear theory include: (a) Alfven-mode frequency gap widening due to energetic trapped ions, (b) interpretation of JET results for plasma pressure effect on TAE modes, and (c) 'counter' propagation of TAE modes due to trapped fast ion anisotropy. The new nonlinear results are: (a) theoretical explanation for the pitchfork splitting effect observed in TAE experiments on JET, (b) existence of coherent structures with strong frequency chirping due to kinetic instability, (c) self-consistent nonlinear theory for fishbone instabilities, and (d) intermittent quasilinear diffusion model for anomalous fast particle losses. (author)

  17. Radiational and energetic characteristics of diatomic molecules (data base)

    International Nuclear Information System (INIS)

    Kuznetsova, L.A.; Pazyuk, E.A.; Stolyarov, A.V.

    1993-01-01

    Data base on radiational and energetic characteristics of diatomic molecules was created. The base consists of two parts: reference system and recommended data system. The reference system contains the information about studies of radiational and energetic parameters of more than 1500 electronic states and 1700 electron transfers for ∼ 350 diatomic molecules and their ions. The base bibliography includes ∼ 3000 publications. 11 refs., 1 figs

  18. The role of energetic ions from plasma in the creation of nanostructured materials and stable polymer surface treatments

    International Nuclear Information System (INIS)

    Bilek, M.M.M.; Newton-McGee, K.; McKenzie, D.R.; McCulloch, D.G.

    2006-01-01

    Plasma processes for the synthesis of new materials as thin films have enabled the production of a wide variety of new materials. These include meta-stable phases, which are not readily found in nature, and more recently, materials with structure on the nanoscale. Study of plasma synthesis processes at the fundamental level has revealed that ion energy, depositing flux and growth surface temperature are the critical parameters affecting the microstructure and the properties of the thin film materials formed. In this paper, we focus on the role of ion flux and impact energy in the creation of thin films with nanoscale structure in the form of multilayers. We describe three synthesis strategies, based on the extraction of ions from plasma sources and involving modulation of ion flux and ion energy. The microstructure, intrinsic stress and physical properties of the multilayered samples synthesized are studied and related back to the conditions at the growth surface during deposition. When energetic ions of a non-condensing species are used, it is possible to place active groups on the surfaces of materials such as polymers. These active groups can then be used as bonding sites in subsequent chemical attachment of proteins or other macromolecules. If the energy of the non-condensing ions is increased to a few keV then modified layers buried under the surface can be produced. Here we describe a method by which the aging effect, which is often observed in plasma surface modifications on polymers, can be reduced and even eliminated using high energy ion bombardment

  19. The composition of corotating energetic particle streams

    International Nuclear Information System (INIS)

    McGuire, R.E.; von Rosenvinge, T.T.; McDonald, F.B.

    1978-01-01

    The relative abundances of 1.5--23 MeV per nucleon ions in corotating nucleon streams are compared with ion abundances in particle events associated with solar flares and with solar and solar wind abundances. He/O and C/O ratios are found to be a factor of the order 2--3 greater in corotating streams than in flare-associated events. The distribution of H/He ratios in corotating streams is found to be much narrower and of lower average value than in flare-associated events. H/He in corotating energetic particle streams compares favorably in both lack of variability and numerical value with H/He in high-speed solar wind plasma streams. The lack of variability suggests that the source population for the corotating energetic particles is the solar wind, a suggestion consistent with acceleration of the corotating particles in interplanetary space

  20. Foreshock waves as observed in energetic ion flux

    Czech Academy of Sciences Publication Activity Database

    Petrukovich, A. A.; Chugunova, O. M.; Inamori, T.; Kudela, Karel; Štetiarová, J.

    2017-01-01

    Roč. 122, č. 5 (2017), s. 4895-4904 ISSN 2169-9380 R&D Projects: GA MŠk EF15_003/0000481 Institutional support: RVO:61389005 Keywords : foreshock * waves * bow shock * energetic particles Subject RIV: DG - Athmosphere Sciences, Meteorology OBOR OECD: Meteorology and atmospheric sciences Impact factor: 2.733, year: 2016

  1. Energetic neutral atom imaging with the Polar CEPPAD/IPS instrument: Initial forward modeling results

    International Nuclear Information System (INIS)

    Henderson, M.G.; Reeves, G.D.; Moore, K.R.; Spence, H.E.; Jorgensen, A.M.; Roelof, E.C.

    1997-01-01

    Although the primary function of the CEP-PAD/IPS instrument on Polar is the measurement of energetic ions in-situ, it has also proven to be a very capable Energetic neutral Atom (ENA) imager. Raw ENA images are currently being constructed on a routine basis with a temporal resolution of minutes during both active and quiet times. However, while analyses of these images by themselves provide much information on the spatial distribution and dynamics of the energetic ion population in the ring current, detailed modeling is required to extract the actual ion distributions. In this paper, the authors present the initial results of forward modeling an IPS ENA image obtained during a small geo-magnetic storm on June 9, 1997. The equatorial ion distribution inferred with this technique reproduces the expected large noon/midnight and dawn/dusk asymmetries. The limitations of the model are discussed and a number of modifications to the basic forward modeling technique are proposed which should significantly improve its performance in future studies

  2. Integration and global analysis of isothermal titration calorimetry data for studying macromolecular interactions.

    Science.gov (United States)

    Brautigam, Chad A; Zhao, Huaying; Vargas, Carolyn; Keller, Sandro; Schuck, Peter

    2016-05-01

    Isothermal titration calorimetry (ITC) is a powerful and widely used method to measure the energetics of macromolecular interactions by recording a thermogram of differential heating power during a titration. However, traditional ITC analysis is limited by stochastic thermogram noise and by the limited information content of a single titration experiment. Here we present a protocol for bias-free thermogram integration based on automated shape analysis of the injection peaks, followed by combination of isotherms from different calorimetric titration experiments into a global analysis, statistical analysis of binding parameters and graphical presentation of the results. This is performed using the integrated public-domain software packages NITPIC, SEDPHAT and GUSSI. The recently developed low-noise thermogram integration approach and global analysis allow for more precise parameter estimates and more reliable quantification of multisite and multicomponent cooperative and competitive interactions. Titration experiments typically take 1-2.5 h each, and global analysis usually takes 10-20 min.

  3. Magnetic fusion with high energy self-colliding ion beams

    International Nuclear Information System (INIS)

    Restoker, N.; Wessel, F.; Maglich, B.; Fisher, A.

    1993-01-01

    Field-reversed configurations of energetic large orbit ions with neutralizing electrons have been proposed as the basis of a fusion reactor. Vlasov equilibria consisting of a ring or an annulus have been investigated. A stability analysis has been carried out for a long thin layer of energetic ions in a low density background plasma. There is a growing body of experimental evidence from tokamaks that energetic ions slow down and diffuse in accordance with classical theory in the presence of large non-thermal fluctuations and anomalous transport of low energy (10 keV) ions. Provided that major instabilities are under control, it seems likely that the design of a reactor featuring energetic self-colliding ion beams can be based on classical theory. In this case a confinement system that is much better than a tokamak is possible. Several methods are described for creating field reversed configurations with intense neutralized ion beams

  4. Magnetic fusion with high energy self-colliding ion beams

    International Nuclear Information System (INIS)

    Rostoker, N.; Wessel, F.; Maglich, B.; Fisher, A.

    1992-06-01

    Field-reversed configurations of energetic large orbit ions with neutralizing electrons have been proposed as the basis of a fusion reactor. Vlasov equilibria consisting of a ring or an annulus have been investigated. A stability analysis has been carried out for a long thin layer of energetic ions in a low density background plasma. There is a growing body of experimental evidence from tokamaks that energetic ions slow down and diffuse in accordance with classical theory in the presence of large non-thermal fluctuations and anomalous transport of low energy (10 keV) ions. Provided that major instabilities are under control, it seems likely that the design of a reactor featuring energetic self-colliding ion beams can be based on classical theory. In this case a confinement system that is much better than a tokamak is possible. Several methods are described for creating field reversed configurations with intense neutralized ion beams

  5. Distribution of energetic oxygen and hydrogen in the near-Earth plasma sheet

    Science.gov (United States)

    Kronberg, E. A.; Grigorenko, E. E.; Haaland, S. E.; Daly, P. W.; Delcourt, D. C.; Luo, H.; Kistler, L. M.; Dandouras, I.

    2015-05-01

    The spatial distributions of different ion species are useful indicators for plasma sheet dynamics. In this statistical study based on 7 years of Cluster observations, we establish the spatial distributions of oxygen ions and protons at energies from 274 to 955 keV, depending on geomagnetic and solar wind (SW) conditions. Compared with protons, the distribution of energetic oxygen has stronger dawn-dusk asymmetry in response to changes in the geomagnetic activity. When the interplanetary magnetic field (IMF) is directed southward, the oxygen ions show significant acceleration in the tail plasma sheet. Changes in the SW dynamic pressure (Pdyn) affect the oxygen and proton intensities in the same way. The energetic protons show significant intensity increases at the near-Earth duskside during disturbed geomagnetic conditions, enhanced SW Pdyn, and southward IMF, implying there location of effective inductive acceleration mechanisms and a strong duskward drift due to the increase of the magnetic field gradient in the near-Earth tail. Higher losses of energetic ions are observed in the dayside plasma sheet under disturbed geomagnetic conditions and enhanced SW Pdyn. These observations are in agreement with theoretical models.

  6. Microstructure evolution and hardness change in ordered Ni3V intermetallic alloy by energetic ion irradiation

    International Nuclear Information System (INIS)

    Hashimoto, A.; Kaneno, Y.; Semboshi, S.; Yoshizaki, H.; Saitoh, Y.; Okamoto, Y.; Iwase, A.

    2014-01-01

    Ni 3 V bulk intermetallic compounds with ordered D0 22 structure were irradiated with 16 MeV Au ions at room temperature. The irradiation induced phase transformation was examined by means of the transmission electron microscope (TEM), the extended X-ray absorption fine structure measurement (EXAFS) and the X-ray diffraction (XRD). We also measured the Vickers hardness for unirradiated and irradiated specimens. The TEM observation shows that by the Au irradiation, the lamellar microstructures and the super lattice spot in diffraction pattern for the unirradiated specimen disappeared. This TEM result as well as the result of XRD and EXAFS measurements means that the intrinsic D0 22 structure of Ni 3 V changes into the A1 (fcc) structure which is the lattice structure just below the melting point in the thermal equilibrium phase diagram. The lattice structure change from D0 22 to A1 (fcc) accompanies a remarkable decrease in Vickers microhardness. The change in crystal structure was discussed in terms of the thermal spike and the sequential atomic displacements induced by the energetic heavy ion irradiation

  7. Time ordering of two-step processes in energetic ion-atom collisions: Basic formalism

    International Nuclear Information System (INIS)

    Stolterfoht, N.

    1993-01-01

    The semiclassical approximation is applied in second order to describe time ordering of two-step processes in energetic ion-atom collisions. Emphasis is given to the conditions for interferences between first- and second-order terms. In systems with two active electrons, time ordering gives rise to a pair of associated paths involving a second-order process and its time-inverted process. Combining these paths within the independent-particle frozen orbital model, time ordering is lost. It is shown that the loss of time ordering modifies the second-order amplitude so that its ability to interfere with the first-order amplitude is essentially reduced. Time ordering and the capability for interference is regained, as one path is blocked by means of the Pauli exclusion principle. The time-ordering formalism is prepared for papers dealing with collision experiments of single excitation [Stolterfoht et al., following paper, Phys. Rev. A 48, 2986 (1993)] and double excitation [Stolterfoht et al. (unpublished)

  8. Analytical model for macromolecular partitioning during yeast cell division

    International Nuclear Information System (INIS)

    Kinkhabwala, Ali; Khmelinskii, Anton; Knop, Michael

    2014-01-01

    Asymmetric cell division, whereby a parent cell generates two sibling cells with unequal content and thereby distinct fates, is central to cell differentiation, organism development and ageing. Unequal partitioning of the macromolecular content of the parent cell — which includes proteins, DNA, RNA, large proteinaceous assemblies and organelles — can be achieved by both passive (e.g. diffusion, localized retention sites) and active (e.g. motor-driven transport) processes operating in the presence of external polarity cues, internal asymmetries, spontaneous symmetry breaking, or stochastic effects. However, the quantitative contribution of different processes to the partitioning of macromolecular content is difficult to evaluate. Here we developed an analytical model that allows rapid quantitative assessment of partitioning as a function of various parameters in the budding yeast Saccharomyces cerevisiae. This model exposes quantitative degeneracies among the physical parameters that govern macromolecular partitioning, and reveals regions of the solution space where diffusion is sufficient to drive asymmetric partitioning and regions where asymmetric partitioning can only be achieved through additional processes such as motor-driven transport. Application of the model to different macromolecular assemblies suggests that partitioning of protein aggregates and episomes, but not prions, is diffusion-limited in yeast, consistent with previous reports. In contrast to computationally intensive stochastic simulations of particular scenarios, our analytical model provides an efficient and comprehensive overview of partitioning as a function of global and macromolecule-specific parameters. Identification of quantitative degeneracies among these parameters highlights the importance of their careful measurement for a given macromolecular species in order to understand the dominant processes responsible for its observed partitioning

  9. Interplanetary ions during an energetic storm particle event - The distribution function from solar wind thermal energies to 1.6 MeV

    Science.gov (United States)

    Gosling, J. T.; Asbridge, J. R.; Bame, S. J.; Feldman, W. C.; Zwickl, R. D.; Paschmann, G.; Sckopke, N.; Hynds, R. J.

    1981-01-01

    An ion velocity distribution function of the postshock phase of an energetic storm particle (ESP) event is obtained from data from the ISEE 2 and ISEE 3 experiments. The distribution function is roughly isotropic in the solar wind frame from solar wind thermal energies to 1.6 MeV. The ESP event studied (8/27/78) is superposed upon a more energetic particle event which was predominantly field-aligned and which was probably of solar origin. The observations suggest that the ESP population is accelerated directly out of the solar wind thermal population or its quiescent suprathermal tail by a stochastic process associated with shock wave disturbance. The acceleration mechanism is sufficiently efficient so that approximately 1% of the solar wind population is accelerated to suprathermal energies. These suprathermal particles have an energy density of approximately 290 eV cubic centimeters.

  10. Radiolysis of astrophysical ice analogs by energetic ions: the effect of projectile mass and ice temperature.

    Science.gov (United States)

    Pilling, Sergio; Duarte, Eduardo Seperuelo; Domaracka, Alicja; Rothard, Hermann; Boduch, Philippe; da Silveira, Enio F

    2011-09-21

    An experimental study of the interaction of highly charged, energetic ions (52 MeV (58)Ni(13+) and 15.7 MeV (16)O(5+)) with mixed H(2)O : C(18)O(2) astrophysical ice analogs at two different temperatures is presented. This analysis aims to simulate the chemical and the physicochemical interactions induced by cosmic rays inside dense, cold astrophysical environments, such as molecular clouds or protostellar clouds as well at the surface of outer solar system bodies. The measurements were performed at the heavy ion accelerator GANIL (Grand Accelerateur National d'Ions Lourds) in Caen, France. The gas samples were deposited onto a CsI substrate at 13 K and 80 K. In situ analysis was performed by a Fourier transform infrared (FTIR) spectrometer at different fluences. Radiolysis yields of the produced species were quantified. The dissociation cross section at 13 K of both H(2)O and CO(2) is about 3-4 times smaller when O ions are employed. The ice temperature seems to affect differently each species when the same projectile was employed. The formation cross section at 13 K of molecules such as C(18)O, CO (with oxygen from water), and H(2)O(2) increases when Ni ions are employed. The formation of organic compounds seems to be enhanced by the oxygen projectiles and at lower temperatures. In addition, because the organic production at 13 K is at least 4 times higher than the value at 80 K, we also expect that interstellar ices are more organic-rich than the surfaces of outer solar system bodies.

  11. New Measurements of Suprathermal Ions, Energetic Particles, and Cosmic Rays in the Outer Heliosphere from the New Horizons PEPSSI Instrument

    Science.gov (United States)

    Hill, M. E.; Kollmann, P.; McNutt, R. L., Jr.; Stern, A.; Weaver, H. A., Jr.; Young, L. A.; Olkin, C.; Spencer, J. R.

    2017-12-01

    During the period from January 2012 to December 2017 the New Horizons spacecraft traveled from 22 to 41 AU from the Sun, making nearly continuous interplanetary plasma and particle measurements utilizing the SWAP and PEPSSI instruments. We report on newly extended measurements from PEPSSI (Pluto Energetic Particle Spectrometer Science Investigation) that now bring together suprathermal particles above 2 keV/nuc (including interstellar pickup ions), energetic particles with H, He, and O composition from 30 keV to 1 MeV, and cosmic rays above 65 MeV (with effective count-rate-limited upper energy of 1 GeV). Such a wide energy range allows us to look at the solar wind structures passing over the spacecraft, the energetic particles that are often accelerated by these structures, and the suppression of cosmic rays resulting from the increased turbulence inhibiting cosmic ray transport to the spacecraft position (i.e., Forbush decreases). This broad perspective provides simultaneous, previously unattainable diagnostics of outer heliospheric particle dynamics and acceleration. Besides the benefit of being recent, in-ecliptic measurements, unlike the historic Voyager 1 and 2 spacecraft, these PEPSSI observations are also totally unique in the suprathermal range; in this region only PEPSSI can span the suprathermal range, detecting a population that is a linchpin to understanding the outer heliosphere.

  12. What Macromolecular Crowding Can Do to a Protein

    Science.gov (United States)

    Kuznetsova, Irina M.; Turoverov, Konstantin K.; Uversky, Vladimir N.

    2014-01-01

    The intracellular environment represents an extremely crowded milieu, with a limited amount of free water and an almost complete lack of unoccupied space. Obviously, slightly salted aqueous solutions containing low concentrations of a biomolecule of interest are too simplistic to mimic the “real life” situation, where the biomolecule of interest scrambles and wades through the tightly packed crowd. In laboratory practice, such macromolecular crowding is typically mimicked by concentrated solutions of various polymers that serve as model “crowding agents”. Studies under these conditions revealed that macromolecular crowding might affect protein structure, folding, shape, conformational stability, binding of small molecules, enzymatic activity, protein-protein interactions, protein-nucleic acid interactions, and pathological aggregation. The goal of this review is to systematically analyze currently available experimental data on the variety of effects of macromolecular crowding on a protein molecule. The review covers more than 320 papers and therefore represents one of the most comprehensive compendia of the current knowledge in this exciting area. PMID:25514413

  13. Influence of asymmetries in the magnetic draping pattern at Titan on the emission of energetic neutral atoms

    Science.gov (United States)

    Kabanovic, Slawa; Feyerabend, Moritz; Simon, Sven; Meeks, Zachary; Wulms, Veit

    2018-03-01

    We model the emission of energetic neutral atoms (ENAs) that are generated by the interaction between energetic ions from Saturn's magnetosphere and neutrals from the upper atmosphere of the giant planet's largest moon Titan. The trajectories of the parent ions and the resulting ENA emission morphology are highly sensitive to the electromagnetic field configuration near the moon. We therefore compare the ENA emission pattern for spatially homogeneous fields to the emission obtained from a magnetohydrodynamic (MHD) and a hybrid (kinetic ions, fluid electrons) model of Titan's magnetospheric interaction, by computing the trajectories of several billion energetic test particles. While the MHD model takes into account the draping of the magnetic field lines around Titan, the hybrid approach also considers the significant asymmetries in the electromagnetic fields due to the large gyroradii of pick-up ions from Titan's ionosphere. In all three models, the upstream parameters correspond to the conditions during Cassini's TA flyby of Titan. The shape, magnitude, and location of the ENA emission maxima vary considerably between these three field configurations. The magnetic pile-up region at Titan's ramside deflects a large number of the energetic parent ions, thereby reducing the ENA flux. However, the draped magnetic field lines in Titan's lobes rotate the gyration planes of the incident energetic ions, thereby facilitating the observable ENA production. Overall, the ENA flux calculated for the MHD model is weaker than the emission obtained for the electromagnetic fields from the hybrid code. In addition, we systematically investigate the dependency of the ENA emission morphology on the energy of the parent ions and on the upstream magnetic field strength.

  14. Characteristics of solar and heliospheric ion populations observed near earth

    International Nuclear Information System (INIS)

    Gloeckler, G.

    1984-01-01

    The composition and spectra of ions in solar-energetic-particle and energetic-storm-particle events, of diffuse ions upstream of the earth bow shock, and of ions in deep-geomagnetic-tail plasmoids are characterized in a summary of in situ observations. Data are presented in graphs and tables, and remarkable similarities are noted in the distribution functions of the heliospheric ion populations. The solar wind, acting through acceleration mechanisms associated with shocks and turbulence, is identified as the major plasma source of suprathermal and energetic particles. 33 references

  15. VISIONS: Remote Observations of a Spatially-Structured Filamentary Source of Energetic Neutral Atoms near the Polar Cap Boundary During an Auroral Substorm

    Science.gov (United States)

    Collier, Michael R.; Chornay, D.; Clemmons, J.; Keller, J. W.; Klenzing, J.; Kujawski, J.; McLain, J.; Pfaff, R.; Rowland, D.; Zettergren, M.

    2015-01-01

    We report initial results from the VISualizing Ion Outflow via Neutral atom imaging during a Substorm (VISIONS) rocket that flew through and near several regions of enhanced auroral activity and also sensed regions of ion outflow both remotely and directly. The observed neutral atom fluxes were largest at the lower energies and generally higher in the auroral zone than in the polar cap. In this paper, we focus on data from the latter half of the VISIONS trajectory when the rocket traversed the polar cap region. During this period, many of the energetic neutral atom spectra show a peak at 100 electronvolts. Spectra with peaks around 100 electronvolts are also observed in the Electrostatic Ion Analyzer (EIA) data consistent with these ions comprising the source population for the energetic neutral atoms. The EIA observations of this low energy population extend only over a few tens of kilometers. Furthermore, the directionality of the arriving energetic neutral atoms is consistent with either this spatially localized source of energetic ions extending from as low as about 300 kilometers up to above 600 kilometers or a larger source of energetic ions to the southwest.

  16. Macromolecular nanotheranostics for multimodal anticancer therapy

    Science.gov (United States)

    Huis in't Veld, Ruben; Storm, Gert; Hennink, Wim E.; Kiessling, Fabian; Lammers, Twan

    2011-10-01

    Macromolecular carrier materials based on N-(2-hydroxypropyl)methacrylamide (HPMA) are prototypic and well-characterized drug delivery systems that have been extensively evaluated in the past two decades, both at the preclinical and at the clinical level. Using several different imaging agents and techniques, HPMA copolymers have been shown to circulate for prolonged periods of time, and to accumulate in tumors both effectively and selectively by means of the Enhanced Permeability and Retention (EPR) effect. Because of this, HPMA-based macromolecular nanotheranostics, i.e. formulations containing both drug and imaging agents within a single formulation, have been shown to be highly effective in inducing tumor growth inhibition in animal models. In patients, however, as essentially all other tumor-targeted nanomedicines, they are generally only able to improve the therapeutic index of the attached active agent by lowering its toxicity, and they fail to improve the efficacy of the intervention. Bearing this in mind, we have recently reasoned that because of their biocompatibility and their beneficial biodistribution, nanomedicine formulations might be highly suitable systems for combination therapies. In the present manuscript, we briefly summarize several exemplary efforts undertaken in this regard in our labs in the past couple of years, and we show that long-circulating and passively tumor-targeted macromolecular nanotheranostics can be used to improve the efficacy of radiochemotherapy and of chemotherapy combinations.

  17. Recent advances in macromolecular prodrugs

    DEFF Research Database (Denmark)

    Riber, Camilla Frich; Zelikin, Alexander N.

    2017-01-01

    Macromolecular prodrugs (MP) are high molar mass conjugates, typically carrying several copies of a drug or a drug combination, designed to optimize delivery of the drug, that is — its pharmacokinetics. From its advent several decades ago, design of MP has undergone significant development and es...

  18. Status and prospects of macromolecular crystallography

    Indian Academy of Sciences (India)

    technique that could be completely automated in most cases. ... major challenge in macromolecular crystallography today is ... tial characterization of crystals in the home source and make a ... opportunities for a generation of structural biolo-.

  19. Electronic charge transfer in cobalt doped fullerene thin films and effect of energetic ion impacts by x-ray absorption spectroscopy

    International Nuclear Information System (INIS)

    Thakur, P.; Kumar, Amit; Gautam, S.; Chae, K.H.

    2011-01-01

    We report on the electronic charge transfer in cobalt doped fullerene thin films by means of near-edge x-ray-absorption fine structure (NEXAFS) spectroscopy measurement. Co-doped fullerene films were prepared by co-deposition technique and subjected to energetic ion irradiation (120 MeV Au) for possibly alignment or interconnect of randomly distributed metal particles. Polarization dependent NEXAFS spectra revealed the alignment of Co and C atoms along the irradiated ionic path. The structural changes in Co-doped as-deposited and ion irradiated fullerene films were investigated by means of Raman spectroscopy measurements. Downshift of pentagonal pinch mode A g (2) in Raman spectroscopy indicated the electronic charge transfer from Co atom to fullerene molecules, which is further confirmed by NEXAFS at C K-edge for Co-doped fullerene films.

  20. Streaming reversal of energetic particles in the magnetotail during a substorm

    Science.gov (United States)

    Lui, A. T. Y.; Williams, D. J.; Eastman, T. E.; Frank, L. A.; Akasofu, S.-I.

    1984-01-01

    A case of reversal in the streaming anisotropy of energetic ions and in the plasma flow observed from the IMP 8 spacecraft during a substorm on February 8, 1978 is studied in detail using measurements of energetic particles, plasma, and magnetic field. Four new features emerge when high time resolution data are examined in detail. The times of streaming reversal of energetic particles in different energy ranges do not coincide with the time of plasma flow reversal. Qualitatively different velocity distributions are observed in earthward and tailward plasma flows during the observed flow reversal intervals. Strong tailward streaming of energetic particles can be detected during northward magnetic field environments and, conversely, earthward streaming in southward field environments. During the period of tailward streaming of energetic particles, earthward streaming fluxes are occasionally detected.

  1. Energetic Particles Dynamics in Mercury's Magnetosphere

    Science.gov (United States)

    Walsh, Brian M.; Ryou, A.S.; Sibeck, D. G.; Alexeev, I. I.

    2013-01-01

    We investigate the drift paths of energetic particles in Mercury's magnetosphere by tracing their motion through a model magnetic field. Test particle simulations solving the full Lorentz force show a quasi-trapped energetic particle population that gradient and curvature drift around the planet via "Shabansky" orbits, passing though high latitudes in the compressed dayside by equatorial latitudes on the nightside. Due to their large gyroradii, energetic H+ and Na+ ions will typically collide with the planet or the magnetopause and will not be able to complete a full drift orbit. These simulations provide direct comparison for recent spacecraft measurements from MESSENGER. Mercury's offset dipole results in an asymmetric loss cone and therefore an asymmetry in particle precipitation with more particles precipitating in the southern hemisphere. Since the planet lacks an atmosphere, precipitating particles will collide directly with the surface of the planet. The incident charged particles can kick up neutrals from the surface and have implications for the formation of the exosphere and weathering of the surface

  2. Plasma and energetic particle structure upstream of a quasi-parallel interplanetary shock

    Science.gov (United States)

    Kennel, C. F.; Scarf, F. L.; Coroniti, F. V.; Russell, C. T.; Wenzel, K.-P.; Sanderson, T. R.; Van Nes, P.; Smith, E. J.; Tsurutani, B. T.; Scudder, J. D.

    1984-01-01

    ISEE 1, 2 and 3 data from 1978 on interplanetary magnetic fields, shock waves and particle energetics are examined to characterize a quasi-parallel shock. The intense shock studied exhibited a 640 km/sec velocity. The data covered 1-147 keV protons and electrons and ions with energies exceeding 30 keV in regions both upstream and downstream of the shock, and also the magnitudes of ion-acoustic and MHD waves. The energetic particles and MHD waves began being detected 5 hr before the shock. Intense halo electron fluxes appeared ahead of the shock. A closed magnetic field structure was produced with a front end 700 earth radii from the shock. The energetic protons were cut off from the interior of the magnetic bubble, which contained a markedly increased density of 2-6 keV protons as well as the shock itself.

  3. Energetic heavy ions accelerate differentiation in the descendants of irradiated normal human diploid fibroblasts

    International Nuclear Information System (INIS)

    Hamada, Nobuyuki; Hara, Takamitsu; Funayama, Tomoo; Sakashita, Tetsuya; Kobayashi, Yasuhiko

    2008-01-01

    Ionizing radiation-induced genomic instability has been demonstrated in a variety of endpoints such as delayed reproductive death, chromosome instability and mutations, which occurs in the progeny of survivors many generations after the initial insult. Dependence of these effects on the linear energy transfer (LET) of the radiation is incompletely characterized; however, our previous work has shown that delayed reductions in clonogenicity can be most pronounced at LET of 108 keV/μm. To gain insight into potential cellular mechanisms involved in LET-dependent delayed loss of clonogenicity, we investigated morphological changes in colonies arising from normal human diploid fibroblasts exposed to γ-rays or energetic carbon ions (108 keV/μm). Exposure of confluent cultures to carbon ions was 4-fold more effective at inactivating cellular clonogenic potential and produced more abortive colonies containing reduced number of cells per colony than γ-rays. Second, colonies were assessed for clonal morphotypic heterogeneity. The yield of differentiated cells was elevated in a dose- and LET-dependent fashion in clonogenic colonies, whereas differentiated cells predominated to a comparable extent irrespective of radiation type or dose in abortive colonies. The incidence of giant or multinucleated cells was also increased but much less frequent than that of differentiated cells. Collectively, our results indicate that carbon ions facilitate differentiation more effectively than γ-rays as a major response in the progeny of irradiated fibroblasts. Accelerated differentiation may account, at least in part, for dose- and LET-dependent delayed loss of clonogenicity in normal human diploid cells, and could be a defensive mechanism that minimizes further expansion of aberrant cells

  4. Energetic evolution of cellular Transportomes

    DEFF Research Database (Denmark)

    Darbani, Behrooz; Kell, Douglas B.; Borodina, Irina

    2018-01-01

    of the transition from prokaryotes to eukaryotes. The transportome analysis also indicated seven bacterial species, including Neorickettsia risticii and Neorickettsia sennetsu, as likely origins of the mitochondrion in eukaryotes, based on the phylogenetically restricted presence therein of clear homologues......) than in primitive eukaryotes (13%), algae and plants (10%) and in fungi and animals (5–6%). This decrease is compensated by an increased occurrence of secondary transporters and ion channels. The share of ion channels is particularly high in animals (ca. 30% of the transportome) and algae and plants...... of modern mitochondrial solute carriers. Conclusions: The results indicate that the transportomes of eukaryotes evolved strongly towards a higher energetic efficiency, as ATP-dependent transporters diminished and secondary transporters and ion channels proliferated. These changes have likely been important...

  5. Physics of energetic particle-driven instabilities in the START spherical tokamak

    International Nuclear Information System (INIS)

    McClements, K.G.; Gryaznevich, M.P.; Akers, R.J.; Appel, L.C.; Counsell, G.F.; Roach, C.M.; Sharapov, S.E.; Majeski, R.

    1999-01-01

    The recent use of neutral beam injection (NBI) in the UKAEA small tight aspect ratio tokamak (START) has provided the first opportunity to study experimentally the physics of energetic ions in spherical tokamak (ST) plasmas. In such devices the ratio of major radius to minor radius R 0 /a is of order unity. Several distinct classes of NBI-driven instability have been observed at frequencies up to 1 MHz during START discharges. These observations are described, and possible interpretations are given. Equilibrium data, corresponding to times of beam-driven wave activity, are used to compute continuous shear Alfven spectra: toroidicity and high plasma beta give rise to wide spectral gaps, extending up to frequencies of several times the Alfven gap frequency. In each of these gaps Alfvenic instabilities could, in principle, be driven by energetic ions. Chirping modes observed at high beta in this frequency range have bandwidths comparable to or greater than the gap widths. Instability drive in START is provided by beam ion pressure gradients (as in conventional tokamaks), and also by positive gradients in beam ion velocity distributions, which arise from velocity-dependent charge exchange losses. It is shown that fishbone-like bursts observed at a few tens of kHz can be attributed to internal kink mode excitation by passing beam ions, while narrow-band emission at several hundred kHz may be due to excitation of fast Alfven (magnetosonic) eigenmodes. In the light of our understanding of energetic particle-driven instabilities in START, the possible existence of such instabilities in larger STs is discussed. (author)

  6. The energetic ion signature of an O-type neutral line in the geomagnetic tail

    Science.gov (United States)

    Martin, R. F., Jr.; Johnson, D. F.; Speiser, T. W.

    1991-01-01

    An energetic ion signature is presented which has the potential for remote sensing of an O-type neutral line embedded in a current sheet. A source plasma with a tailward flowing Kappa distribution yields a strongly non-Kappa distribution after interacting with the neutral line: sharp jumps, or ridges, occur in the velocity space distribution function f(nu-perpendicular, nu-parallel) associated with both increases and decreases in f. The jumps occur when orbits are reversed in the x-direction: a reversal causing initially earthward particles (low probability in the source distribution) to be observed results in a decrease in f, while a reversal causing initially tailward particles to be observed produces an increase in f. The reversals, and hence the jumps, occur at approximately constant values of perpendicular velocity in both the positive nu parallel and negative nu parallel half planes. The results were obtained using single particle simulations in a fixed magnetic field model.

  7. Automated data collection for macromolecular crystallography.

    Science.gov (United States)

    Winter, Graeme; McAuley, Katherine E

    2011-09-01

    An overview, together with some practical advice, is presented of the current status of the automation of macromolecular crystallography (MX) data collection, with a focus on MX beamlines at Diamond Light Source, UK. Copyright © 2011 Elsevier Inc. All rights reserved.

  8. Celebrating macromolecular crystallography: A personal perspective

    Directory of Open Access Journals (Sweden)

    Abad-Zapatero, Celerino

    2015-04-01

    Full Text Available The twentieth century has seen an enormous advance in the knowledge of the atomic structures that surround us. The discovery of the first crystal structures of simple inorganic salts by the Braggs in 1914, using the diffraction of X-rays by crystals, provided the critical elements to unveil the atomic structure of matter. Subsequent developments in the field leading to macromolecular crystallography are presented with a personal perspective, related to the cultural milieu of Spain in the late 1950’s. The journey of discovery of the author, as he developed professionally, is interwoven with the expansion of macromolecular crystallography from the first proteins (myoglobin, hemoglobin to the ‘coming of age’ of the field in 1971 and the discoveries that followed, culminating in the determination of the structure of the ribosomes at the turn of the century. A perspective is presented exploring the future of the field and also a reflection about the future generations of Spanish scientists.El siglo XX ha sido testigo del increíble avance que ha experimentado el conocimiento de la estructura atómica de la materia que nos rodea. El descubrimiento de las primeras estructuras atómicas de sales inorgánicas por los Bragg en 1914, empleando difracción de rayos X con cristales, proporcionó los elementos clave para alcanzar tal conocimiento. Posteriores desarrollos en este campo, que condujeron a la cristalografía macromolecular, se presentan aquí desde una perspectiva personal, relacionada con el contexto cultural de la España de la década de los 50. La experiencia del descubrimiento científico, durante mi desarrollo profesional, se integra en el desarrollo de la cristalografía macromolecular, desde las primeras proteínas (míoglobina y hemoglobina, hasta su madurez en 1971 que, con los posteriores descubrimientos, culmina con la determinación del la estructura del ribosoma. Asimismo, se explora el futuro de esta disciplina y se

  9. Determination of the ion-exchange capacity of anion-selective membranes

    Czech Academy of Sciences Publication Activity Database

    Karas, F.; Hnát, J.; Paidar, M.; Schauer, Jan; Bouzek, K.

    2014-01-01

    Roč. 39, č. 10 (2014), s. 5054-5062 ISSN 0360-3199 Institutional support: RVO:61389013 Keywords : ion-exchange capacity * anion-selective membranes * titration Subject RIV: CD - Macromolecular Chemistry Impact factor: 3.313, year: 2014

  10. Experimental investigation of possible geomagnetic feedback from energetic (0.1 to 16 keV) terrestrial O(+) ions in the magnetotail current sheet

    Science.gov (United States)

    Lennartsson, O. W.; Klumpar, D. M.; Shelley, E. G.; Quinn, J. M.

    1994-01-01

    Data from energetic ion mass spectrometers on the ISEE 1 and AMPTE/CCE spacecraft are combined with geomagnetic and solar indices to investigate, in a statistical fashion, whether energized O(+) ions of terrestrial origin constitute a source of feedback which triggers or amplifies geomagnetic activity as has been suggested in the literature, by contributing a destabilizing mass increase in the magnetotail current sheet. The ISEE 1 data (0.1-16 keV/e) provide in situ observations of the O(+) concentration in the central plasma sheet, inside of 23 R(sub E), during the rising and maximum phases of solar cycle 21, as well as inner magnetosphere data from same period. The CCE data (0.1-17 keV/e) taken during the subsequent solar minimum all within 9 R(sub E). provide a reference for long-term variations in the magnetosphere O(+) content. Statistical correlations between the ion data and the indices, and between different indices. all point in the same direction: there is probably no feedback specific to the O(+) ions, in spite of the fact that they often contribute most of the ion mass density in the tail current sheet.

  11. Structure studies of macromolecular systems

    Czech Academy of Sciences Publication Activity Database

    Hašek, Jindřich; Dohnálek, Jan; Skálová, Tereza; Dušková, Jarmila; Kolenko, Petr

    2006-01-01

    Roč. 13, č. 3 (2006), s. 136 ISSN 1211-5894. [Czech and Slovak Crystallographic Colloquium. 22.06.2006-24.06.2006, Grenoble] R&D Projects: GA AV ČR IAA4050811; GA MŠk 1K05008 Keywords : structure * X-ray diffraction * synchrotron Subject RIV: CD - Macromolecular Chemistry http://www. xray .cz/ms/default.htm

  12. Fast wave current drive on ITER in the presence of energetic alphas

    International Nuclear Information System (INIS)

    Mau, T.K.

    1989-01-01

    The impact of energetic alpha particle wave absorption on the range of frequencies for efficient fast wave current drive in an ITER-like fusion reactor core is investigated. The energetic alpha damping decrement is calculated, using an exact slowing down distribution function, and compared to electron and fuel ion damping over a wide range of frequencies. A combination of strong alpha damping and edge electron absorption in the higher ion harmonic regime limits efficient core fast wave current drive to the lower harmonics (1=2.3). However, high frequency fast waves may be employed to generate current in the outer plasma region. 11 refs., 7 figs

  13. Control of Macromolecular Architectures for Renewable Polymers: Case Studies

    Science.gov (United States)

    Tang, Chuanbing

    The development of sustainable polymers from nature biomass is growing, but facing fierce competition from existing petrochemical-based counterparts. Controlling macromolecular architectures to maximize the properties of renewable polymers is a desirable approach to gain advantages. Given the complexity of biomass, there needs special consideration other than traditional design. In the presentation, I will talk about a few case studies on how macromolecular architectures could tune the properties of sustainable bioplastics and elastomers from renewable biomass such as resin acids (natural rosin) and plant oils.

  14. Effect of Upstream ULF Waves on the Energetic Ion Diffusion at the Earth's Foreshock. I. Theory and Simulation

    Science.gov (United States)

    Otsuka, Fumiko; Matsukiyo, Shuichi; Kis, Arpad; Nakanishi, Kento; Hada, Tohru

    2018-02-01

    Field-aligned diffusion of energetic ions in the Earth’s foreshock is investigated by using the quasi-linear theory (QLT) and test particle simulation. Non-propagating MHD turbulence in the solar wind rest frame is assumed to be purely transverse with respect to the background field. We use a turbulence model based on a multi-power-law spectrum including an intense peak that corresponds to upstream ULF waves resonantly generated by the field-aligned beam (FAB). The presence of the ULF peak produces a concave shape of the diffusion coefficient when it is plotted versus the ion energy. The QLT including the effect of the ULF wave explains the simulation result well, when the energy density of the turbulent magnetic field is 1% of that of the background magnetic field and the power-law index of the wave spectrum is less than 2. The numerically obtained e-folding distances from 10 to 32 keV ions match with the observational values in the event discussed in the companion paper, which contains an intense ULF peak in the spectra generated by the FAB. Evolution of the power spectrum of the ULF waves when approaching the shock significantly affects the energy dependence of the e-folding distance.

  15. Hypoxic tumor environments exhibit disrupted collagen I fibers and low macromolecular transport.

    Directory of Open Access Journals (Sweden)

    Samata M Kakkad

    Full Text Available Hypoxic tumor microenvironments result in an aggressive phenotype and resistance to therapy that lead to tumor progression, recurrence, and metastasis. While poor vascularization and the resultant inadequate drug delivery are known to contribute to drug resistance, the effect of hypoxia on molecular transport through the interstitium, and the role of the extracellular matrix (ECM in mediating this transport are unexplored. The dense mesh of fibers present in the ECM can especially influence the movement of macromolecules. Collagen 1 (Col1 fibers form a key component of the ECM in breast cancers. Here we characterized the influence of hypoxia on macromolecular transport in tumors, and the role of Col1 fibers in mediating this transport using an MDA-MB-231 breast cancer xenograft model engineered to express red fluorescent protein under hypoxia. Magnetic resonance imaging of macromolecular transport was combined with second harmonic generation microscopy of Col1 fibers. Hypoxic tumor regions displayed significantly decreased Col1 fiber density and volume, as well as significantly lower macromolecular draining and pooling rates, than normoxic regions. Regions adjacent to severely hypoxic areas revealed higher deposition of Col1 fibers and increased macromolecular transport. These data suggest that Col1 fibers may facilitate macromolecular transport in tumors, and their reduction in hypoxic regions may reduce this transport. Decreased macromolecular transport in hypoxic regions may also contribute to poor drug delivery and tumor recurrence in hypoxic regions. High Col1 fiber density observed around hypoxic regions may facilitate the escape of aggressive cancer cells from hypoxic regions.

  16. Macromolecular target prediction by self-organizing feature maps.

    Science.gov (United States)

    Schneider, Gisbert; Schneider, Petra

    2017-03-01

    Rational drug discovery would greatly benefit from a more nuanced appreciation of the activity of pharmacologically active compounds against a diverse panel of macromolecular targets. Already, computational target-prediction models assist medicinal chemists in library screening, de novo molecular design, optimization of active chemical agents, drug re-purposing, in the spotting of potential undesired off-target activities, and in the 'de-orphaning' of phenotypic screening hits. The self-organizing map (SOM) algorithm has been employed successfully for these and other purposes. Areas covered: The authors recapitulate contemporary artificial neural network methods for macromolecular target prediction, and present the basic SOM algorithm at a conceptual level. Specifically, they highlight consensus target-scoring by the employment of multiple SOMs, and discuss the opportunities and limitations of this technique. Expert opinion: Self-organizing feature maps represent a straightforward approach to ligand clustering and classification. Some of the appeal lies in their conceptual simplicity and broad applicability domain. Despite known algorithmic shortcomings, this computational target prediction concept has been proven to work in prospective settings with high success rates. It represents a prototypic technique for future advances in the in silico identification of the modes of action and macromolecular targets of bioactive molecules.

  17. Interpretation of ion cyclotron emission from fusion and space plasmas

    International Nuclear Information System (INIS)

    Dendy, R.O.

    1994-01-01

    Superthermal ion cyclotron emission (ICE) is observed in both fusion and space plasma. Typical spectra display strong peaks at sequential multiple ion cyclotron harmonics, and distinct energetic ion populations are present in the emitting regions. In JET and TFTR, for example, ICE appears to be driven by fusion products or by injected beam ions in the outer mid plane; and in the Earth's ring current, radiation belts, and bow shock, ICE has been observed by the spacecraft OGO 3, GEOS 1 and 2 and AMPTE/IRM, often in conjunction with highly non-Maxwellian proton populations. Common emission mechanisms, arising from collective relaxation of energetic ion populations, appear to operate in both the fusion and space plasma environments. These are reviewed here, and the potential role of ICE as a diagnostic of energetic ion populations is also examined. (Author)

  18. Energetic particle effects on global MHD modes

    International Nuclear Information System (INIS)

    Cheng, C.Z.

    1990-01-01

    The effects of energetic particles on MHD type modes are studied by analytical theories and the nonvariational kinetic-MHD stability code (NOVA-K). In particular we address the problems of (1) the stabilization of ideal MHD internal kink modes and the excitation of resonant ''fishbone'' internal modes and (2) the alpha particle destabilization of toroidicity-induced Alfven eigenmodes (TAE) via transit resonances. Analytical theories are presented to help explain the NOVA-K results. For energetic trapped particles generated by neutral-beam injection (NBI) or ion cyclotron resonant heating (ICRH), a stability window for the n=1 internal kink mode in the hot particle beat space exists even in the absence of core ion finite Larmor radius effect (finite ω *i ). On the other hand, the trapped alpha particles are found to resonantly excite instability of the n=1 internal mode and can lower the critical beta threshold. The circulating alpha particles can strongly destabilize TAE modes via inverse Landau damping associated with the spatial gradient of the alpha particle pressure. 23 refs., 5 figs

  19. Energetics of lithium ion battery failure

    Energy Technology Data Exchange (ETDEWEB)

    Lyon, Richard E., E-mail: richard.e.lyon@faa.gov; Walters, Richard N.

    2016-11-15

    Highlights: • First measure of anaerobic failure energy of lithium ion batteries. • Novel and simple bomb calorimeter method developed and demonstrated. • Four different cathode chemistries examined. • Full range of charged capacity used as independent variable. • Failure energy identified as primary safety hazard. - Abstract: The energy released by failure of rechargeable 18-mm diameter by 65-mm long cylindrical (18650) lithium ion cells/batteries was measured in a bomb calorimeter for 4 different commercial cathode chemistries over the full range of charge using a method developed for this purpose. Thermal runaway was induced by electrical resistance (Joule) heating of the cell in the nitrogen-filled pressure vessel (bomb) to preclude combustion. The total energy released by cell failure, ΔH{sub f}, was assumed to be comprised of the stored electrical energy E (cell potential × charge) and the chemical energy of mixing, reaction and thermal decomposition of the cell components, ΔU{sub rxn}. The contribution of E and ΔU{sub rxn} to ΔH{sub f} was determined and the mass of volatile, combustible thermal decomposition products was measured in an effort to characterize the fire safety hazard of rechargeable lithium ion cells.

  20. Stochastic reaction-diffusion algorithms for macromolecular crowding

    Science.gov (United States)

    Sturrock, Marc

    2016-06-01

    Compartment-based (lattice-based) reaction-diffusion algorithms are often used for studying complex stochastic spatio-temporal processes inside cells. In this paper the influence of macromolecular crowding on stochastic reaction-diffusion simulations is investigated. Reaction-diffusion processes are considered on two different kinds of compartmental lattice, a cubic lattice and a hexagonal close packed lattice, and solved using two different algorithms, the stochastic simulation algorithm and the spatiocyte algorithm (Arjunan and Tomita 2010 Syst. Synth. Biol. 4, 35-53). Obstacles (modelling macromolecular crowding) are shown to have substantial effects on the mean squared displacement and average number of molecules in the domain but the nature of these effects is dependent on the choice of lattice, with the cubic lattice being more susceptible to the effects of the obstacles. Finally, improvements for both algorithms are presented.

  1. In situ macromolecular crystallography using microbeams.

    Science.gov (United States)

    Axford, Danny; Owen, Robin L; Aishima, Jun; Foadi, James; Morgan, Ann W; Robinson, James I; Nettleship, Joanne E; Owens, Raymond J; Moraes, Isabel; Fry, Elizabeth E; Grimes, Jonathan M; Harlos, Karl; Kotecha, Abhay; Ren, Jingshan; Sutton, Geoff; Walter, Thomas S; Stuart, David I; Evans, Gwyndaf

    2012-05-01

    Despite significant progress in high-throughput methods in macromolecular crystallography, the production of diffraction-quality crystals remains a major bottleneck. By recording diffraction in situ from crystals in their crystallization plates at room temperature, a number of problems associated with crystal handling and cryoprotection can be side-stepped. Using a dedicated goniometer installed on the microfocus macromolecular crystallography beamline I24 at Diamond Light Source, crystals have been studied in situ with an intense and flexible microfocus beam, allowing weakly diffracting samples to be assessed without a manual crystal-handling step but with good signal to noise, despite the background scatter from the plate. A number of case studies are reported: the structure solution of bovine enterovirus 2, crystallization screening of membrane proteins and complexes, and structure solution from crystallization hits produced via a high-throughput pipeline. These demonstrate the potential for in situ data collection and structure solution with microbeams. © 2012 International Union of Crystallography

  2. An integrated native mass spectrometry and top-down proteomics method that connects sequence to structure and function of macromolecular complexes

    Science.gov (United States)

    Li, Huilin; Nguyen, Hong Hanh; Ogorzalek Loo, Rachel R.; Campuzano, Iain D. G.; Loo, Joseph A.

    2018-02-01

    Mass spectrometry (MS) has become a crucial technique for the analysis of protein complexes. Native MS has traditionally examined protein subunit arrangements, while proteomics MS has focused on sequence identification. These two techniques are usually performed separately without taking advantage of the synergies between them. Here we describe the development of an integrated native MS and top-down proteomics method using Fourier-transform ion cyclotron resonance (FTICR) to analyse macromolecular protein complexes in a single experiment. We address previous concerns of employing FTICR MS to measure large macromolecular complexes by demonstrating the detection of complexes up to 1.8 MDa, and we demonstrate the efficacy of this technique for direct acquirement of sequence to higher-order structural information with several large complexes. We then summarize the unique functionalities of different activation/dissociation techniques. The platform expands the ability of MS to integrate proteomics and structural biology to provide insights into protein structure, function and regulation.

  3. Ion beam modification of buckminsterfullerene

    International Nuclear Information System (INIS)

    Prawer, S.; Nugent, K.W.; McCulloch, D.G.; Leong, W.H.; Hoffman, A.; Kalish, R.

    1995-01-01

    The response of thin films of buckminsterfullerene (C 60 ) to energetic xenon ion impact is investigated. The diagnostics employed include Fourier Transform Infrared and Raman Spectroscopies, Cross-Sectional Transmission Electron Microscopy, and Atomic Force Microscopy. By combining the information obtained from these diagnostics with that from the dependence of the conductivity on ion dose, it is concluded that each C 60 molecule completely disintegrates when hit by an energetic ion. The cross-section for the destruction of about 7 x 10 -13 cm 2 for irradiation with 620 keV Xe ions. The disintegration occurs when C atoms are knocked-out of the molecule either directly by the impinging ion or by an energetic knock-on C atom with the damage cascade. This process is quite different from the Coulomb Explosion mechanism previously proposed in the literature. For very low ions doses ( 11 Xe/cm 2 ) most of the C 60 molecules remain intact; however this dose is sufficient to completely disrupt the ordering of the C 60 molecules in the van der Waals bonded C 60 solid. Disruption of the lattice ordering at such low doses is considered to be attributable to the weakness of the van der Waals forces which bind the C 60 clusters together into the molecular solid. 13 refs., 7 figs

  4. Comparison of secondary ion emission yields for poly-tyrosine between cluster and heavy ion impacts

    International Nuclear Information System (INIS)

    Hirata, K.; Saitoh, Y.; Chiba, A.; Yamada, K.; Takahashi, Y.; Narumi, K.

    2010-01-01

    Emission yields of secondary ions necessary for the identification of poly-tyrosine were compared for incident ion impacts of energetic cluster ions (0.8 MeV C 8 + , 2.4 MeV C 8 + , and 4.0 MeV C 8 + ) and swift heavy monoatomic molybdenum ions (4.0 MeV Mo + and 14 MeV Mo 4+ ) with similar mass to that of the cluster by time-of-flight secondary ion mass analysis combined with secondary ion electric current measurements. The comparison revealed that (1) secondary ion emission yields per C 8 + impact increase with increasing incident energy within the energy range examined, (2) the 4.0 MeV C 8 + impact provides higher emission yields than the impact of the monoatomic Mo ion with the same incident energy (4.0 MeV Mo + ), and (3) the 2.4 MeV C 8 + impact exhibits comparable emission yields to that for the Mo ion impact with higher incident energy (14 MeV Mo 4+ ). Energetic cluster ion impacts effectively produce the characteristic secondary ions for poly-tyrosine, which is advantageous for highly sensitive amino acid detection in proteins using time-of-flight secondary ion mass analysis.

  5. Unimolecular and collisionally induced ion reactions

    International Nuclear Information System (INIS)

    Beynon, J.H.; Boyd, R.K.

    1978-01-01

    The subject is reviewed under the following headings: introduction (mass spectroscopy and the study of fragmentation reactions of gaseous positive ions); techniques and methods (ion sources, detection systems, analysis of ions, data reduction); collision-induced reactions of ions and unimolecular fragmentations of metastable ions; applications (ion structure, energetic measurements, analytical applications, other applications). 305 references. (U.K.)

  6. The interaction of low energy ion beams with surfaces

    International Nuclear Information System (INIS)

    Carter, G.; Armour, D.G.

    1981-01-01

    Four of the most important physical processes which occur during ion plating and allied techniques (1) ion-induced (and energetic-atom-induced) desorption of adsorbed impurities from the substrate surface, (2) ion penetration and entrapment in the substrate and coating, (3) ion-induced sputtering of substrate and coating atoms and (4) recoil displacement of substrate and coating atoms leading to their intermixing. The ion and energetic atom energy range of importance is from thermal energies to the order of 1keV. Current understanding of these processes, supported by discussion of available experimental data, is reviewed. (Auth.)

  7. High harmonic ion cyclotron heating in DIII-D: Beam ion absorption and sawtooth stabilization

    International Nuclear Information System (INIS)

    Heidbrink, W.W.; Fredrickson, E.D.; Mau, T.K.; Petty, C.C.; Pinsker, R.I.; Porkolab, M.; Rice, B.W.

    1999-01-01

    Combined neutral beam injection and fast wave heating at the fourth cyclotron harmonic produce an energetic deuterium beam ion tail in the DIII-D tokamak. When the concentration of thermal hydrogen exceeds ∼ 5%, the beam ion absorption is suppressed in favour of second harmonic hydrogen absorption. As theoretically expected, the beam absorption increases with beam ion gyro-radius; also, central absorption at the fifth harmonic is weaker than central absorption at the fourth harmonic. For central heating at the fourth harmonic, an energetic, perpendicular, beam population forms inside the q = 1 surface. The beam ion tail transiently stabilizes the sawtooth instability but destabilizes toroidicity induced Alfven eigenmodes (TAEs). Saturation of the central heating correlates with the onset of the TAEs. Continued expansion of the q = 1 radius eventually precipitates a sawtooth crash; complete magnetic reconnection is observed. (author)

  8. Energetic particle physics with applications in fusion and space plasmas

    International Nuclear Information System (INIS)

    Cheng, C.Z.

    1997-01-01

    Energetic particle physics is the study of the effects of energetic particles on collective electromagnetic (EM) instabilities and energetic particle transport in plasmas. Anomalously large energetic particle transport is often caused by low frequency MHD instabilities, which are driven by these energetic particles in the presence of a much denser background of thermal particles. The theory of collective energetic particle phenomena studies complex wave-particle interactions in which particle kinetic physics involving small spatial and fast temporal scales can strongly affect the MHD structure and long-time behavior of plasmas. The difficulty of modeling kinetic-MHD multiscale coupling processes stems from the disparate scales which are traditionally analyzed separately: the macroscale MHD phenomena are studied using the fluid MHD framework, while microscale kinetic phenomena are best described by complicated kinetic theories. The authors have developed a kinetic-MHD model that properly incorporates major particle kinetic effects into the MHD fluid description. For tokamak plasmas a nonvariational kinetic-MHD stability code, the NOVA-K code, has been successfully developed and applied to study problems such as the excitation of fishbone and Toroidal Alfven Eigenmodes (TAE) and the sawtooth stabilization by energetic ions in tokamaks. In space plasmas the authors have employed the kinetic-MHD model to study the energetic particle effects on the ballooning-mirror instability which explains the multisatellite observation of the stability and field-aligned structure of compressional Pc 5 waves in the magnetospheric ring current plasma

  9. Crowding-facilitated macromolecular transport in attractive micropost arrays.

    Science.gov (United States)

    Chien, Fan-Tso; Lin, Po-Keng; Chien, Wei; Hung, Cheng-Hsiang; Yu, Ming-Hung; Chou, Chia-Fu; Chen, Yeng-Long

    2017-05-02

    Our study of DNA dynamics in weakly attractive nanofabricated post arrays revealed crowding enhances polymer transport, contrary to hindered transport in repulsive medium. The coupling of DNA diffusion and adsorption to the microposts results in more frequent cross-post hopping and increased long-term diffusivity with increased crowding density. We performed Langevin dynamics simulations and found maximum long-term diffusivity in post arrays with gap sizes comparable to the polymer radius of gyration. We found that macromolecular transport in weakly attractive post arrays is faster than in non-attractive dense medium. Furthermore, we employed hidden Markov analysis to determine the transition of macromolecular adsorption-desorption on posts and hopping between posts. The apparent free energy barriers are comparable to theoretical estimates determined from polymer conformational fluctuations.

  10. In situ macromolecular crystallography using microbeams

    International Nuclear Information System (INIS)

    Axford, Danny; Owen, Robin L.; Aishima, Jun; Foadi, James; Morgan, Ann W.; Robinson, James I.; Nettleship, Joanne E.; Owens, Raymond J.; Moraes, Isabel; Fry, Elizabeth E.; Grimes, Jonathan M.; Harlos, Karl; Kotecha, Abhay; Ren, Jingshan; Sutton, Geoff; Walter, Thomas S.; Stuart, David I.; Evans, Gwyndaf

    2012-01-01

    A sample environment for mounting crystallization trays has been developed on the microfocus beamline I24 at Diamond Light Source. The technical developments and several case studies are described. Despite significant progress in high-throughput methods in macromolecular crystallography, the production of diffraction-quality crystals remains a major bottleneck. By recording diffraction in situ from crystals in their crystallization plates at room temperature, a number of problems associated with crystal handling and cryoprotection can be side-stepped. Using a dedicated goniometer installed on the microfocus macromolecular crystallography beamline I24 at Diamond Light Source, crystals have been studied in situ with an intense and flexible microfocus beam, allowing weakly diffracting samples to be assessed without a manual crystal-handling step but with good signal to noise, despite the background scatter from the plate. A number of case studies are reported: the structure solution of bovine enterovirus 2, crystallization screening of membrane proteins and complexes, and structure solution from crystallization hits produced via a high-throughput pipeline. These demonstrate the potential for in situ data collection and structure solution with microbeams

  11. In situ macromolecular crystallography using microbeams

    Energy Technology Data Exchange (ETDEWEB)

    Axford, Danny; Owen, Robin L.; Aishima, Jun [Diamond Light Source, Harwell Science and Innovation Campus, Didcot, Oxfordshire OX11 0DE (United Kingdom); Foadi, James [Diamond Light Source, Harwell Science and Innovation Campus, Didcot, Oxfordshire OX11 0DE (United Kingdom); Imperial College, London SW7 2AZ (United Kingdom); Morgan, Ann W.; Robinson, James I. [University of Leeds, Leeds LS9 7FT (United Kingdom); Nettleship, Joanne E.; Owens, Raymond J. [Research Complex at Harwell, Rutherford Appleton Laboratory R92, Didcot, Oxfordshire OX11 0DE (United Kingdom); Moraes, Isabel [Imperial College, London SW7 2AZ (United Kingdom); Fry, Elizabeth E.; Grimes, Jonathan M.; Harlos, Karl; Kotecha, Abhay; Ren, Jingshan; Sutton, Geoff; Walter, Thomas S. [University of Oxford, Roosevelt Drive, Oxford OX3 7BN (United Kingdom); Stuart, David I. [Diamond Light Source, Harwell Science and Innovation Campus, Didcot, Oxfordshire OX11 0DE (United Kingdom); University of Oxford, Roosevelt Drive, Oxford OX3 7BN (United Kingdom); Evans, Gwyndaf, E-mail: gwyndaf.evans@diamond.ac.uk [Diamond Light Source, Harwell Science and Innovation Campus, Didcot, Oxfordshire OX11 0DE (United Kingdom)

    2012-04-17

    A sample environment for mounting crystallization trays has been developed on the microfocus beamline I24 at Diamond Light Source. The technical developments and several case studies are described. Despite significant progress in high-throughput methods in macromolecular crystallography, the production of diffraction-quality crystals remains a major bottleneck. By recording diffraction in situ from crystals in their crystallization plates at room temperature, a number of problems associated with crystal handling and cryoprotection can be side-stepped. Using a dedicated goniometer installed on the microfocus macromolecular crystallography beamline I24 at Diamond Light Source, crystals have been studied in situ with an intense and flexible microfocus beam, allowing weakly diffracting samples to be assessed without a manual crystal-handling step but with good signal to noise, despite the background scatter from the plate. A number of case studies are reported: the structure solution of bovine enterovirus 2, crystallization screening of membrane proteins and complexes, and structure solution from crystallization hits produced via a high-throughput pipeline. These demonstrate the potential for in situ data collection and structure solution with microbeams.

  12. Energetic metallic ion implantation in polymers via cost-effective laser-driven ion source

    Science.gov (United States)

    Tahir, Muhammad Bilal; Rafique, M. Shahid; Ahmed, Rabia; Rafique, M.; Iqbal, Tahir; Hasan, Ali

    2017-07-01

    This research work reports the ions emission from the plasma generated by Nd:YAG laser having wavelength 1.064 μm, power 1.1 MW, pulse energy 10 mJ and intensity 1011 W/cm2 irradiated at 70° with respect to the target normal to the ions. These ions were accelerated through a home-made extraction assembly by means of a high voltage DC power supply. The energy of these ions were measured using Thomson parabola technique which utilizes Solid State Nuclear Track Detector (CR-39) and confirmed by Faraday cup as well that exploits a well-known technique known as time of flight. Interestingly, a significant increase in energy (from 490 to 730 keV) was observed with a discrete increase in acceleration potential from 0 to 18 kV. Polyethylene terephthalate (PET) and polypropylene were exposed to this recently developed ion source facility, to authenticate the reliability of this facility. The surface of the polymer is affected when energy of the irradiated ion is increased, which is evident from the optical micrographs. An increase in electrical conductivity was also observed with the increase in ion energy.

  13. An acoustic on-chip goniometer for room temperature macromolecular crystallography.

    Science.gov (United States)

    Burton, C G; Axford, D; Edwards, A M J; Gildea, R J; Morris, R H; Newton, M I; Orville, A M; Prince, M; Topham, P D; Docker, P T

    2017-12-05

    This paper describes the design, development and successful use of an on-chip goniometer for room-temperature macromolecular crystallography via acoustically induced rotations. We present for the first time a low cost, rate-tunable, acoustic actuator for gradual in-fluid sample reorientation about varying axes and its utilisation for protein structure determination on a synchrotron beamline. The device enables the efficient collection of diffraction data via a rotation method from a sample within a surface confined droplet. This method facilitates efficient macromolecular structural data acquisition in fluid environments for dynamical studies.

  14. Characterization techniques for ion bombarded insulators

    International Nuclear Information System (INIS)

    Borders, J.A.

    1987-01-01

    The chapter gives a comprehensive review of the experimental methods for the analysis of ion-bombarded insulators including optical and structural methods, resonance, energetic ion methods, and surface techniques. 48 refs.; 34 figs

  15. Generation of monoenergetic ion beams via ionization dynamics (Conference Presentation)

    Science.gov (United States)

    Lin, Chen; Kim, I. Jong; Yu, Jinqing; Choi, Il Woo; Ma, Wenjun; Yan, Xueqing; Nam, Chang Hee

    2017-05-01

    The research on ion acceleration driven by high intensity laser pulse has attracted significant interests in recent decades due to the developments of laser technology. The intensive study of energetic ion bunches is particularly stimulated by wide applications in nuclear fusion, medical treatment, warm dense matter production and high energy density physics. However, to implement such compact accelerators, challenges are still existing in terms of beam quality and stability, especially in applications that require higher energy and narrow bandwidth spectra ion beams. We report on the acceleration of quasi-mono-energetic ion beams via ionization dynamics in the interaction of an intense laser pulse with a solid target. Using ionization dynamics model in 2D particle-in-cell (PIC) simulations, we found that high charge state contamination ions can only be ionized in the central spot area where the intensity of sheath field surpasses their ionization threshold. These ions automatically form a microstructure target with a width of few micron scale, which is conducive to generate mono-energetic beams. In the experiment of ultraintense (< 10^21 W/cm^2) laser pulses irradiating ultrathin targets each attracted with a contamination layer of nm-thickness, high quality < 100 MeV mono-energetic ion bunches are generated. The peak energy of the self-generated micro-structured target ions with respect to different contamination layer thickness is also examined This is relatively newfound respect, which is confirmed by the consistence between experiment data and the simulation results.

  16. Properties and origin of energetic particles at the duskside of the Earth's magnetosheath throughout a great storm

    Directory of Open Access Journals (Sweden)

    D. V. Sarafopoulos

    1999-09-01

    Full Text Available We study an interval of 56 h on January 16 to 18, 1995, during which the GEOTAIL spacecraft traversed the duskside magnetosheath from  X @ -15 to -40 RE and the EPIC/ICS and EPIC/STICS sensors sporadically detected tens of energetic particle bursts. This interval coincides with the expansion and growth of a great geomagnetic storm. The flux bursts are strongly dependent on the magnetic field orientation. They switch on whenever the Bz component approaches zero (Bz @ 0 nT. We strongly suggest a magnetospheric origin for the energetic ions and electrons streaming along these "exodus channels". The time profiles for energetic protons and "tracer" O+ ions are nearly identical, which suggests a common source. We suggest that the particles leak out of the magnetosphere all the time and that when the magnetosheath magnetic field connects the spacecraft to the magnetotail, they stream away to be observed by the GEOTAIL sensors. The energetic electron fluxes are not observed as commonly as the ions, indicating that their source is more limited in extent. In one case study the magnetosheath magnetic field lines are draped around the magnetopause within the YZ plane and a dispersed structure for peak fluxes of different species is detected and interpreted as evidence for energetic electrons leaking out from the dawn LLBL and then being channelled along the draped magnetic field lines over the magnetopause. Protons leak from the equatorial dusk LLBL and this spatial differentiation between electron and proton sources results in the observed dispersion. A gradient of energetic proton intensities toward the ZGSM = 0 plane is inferred. There is a permanent layer of energetic particles adjacent to the magnetosheath during this interval in which the dominant component of the magnetic field was Bz.Key words. Magnetospheric physics (magnetosheath; magnetotail boundary layers; storms and substorms

  17. Induction of Micronuclei in Human Fibroblasts across the Bragg Curve of Energetic Si and Fe Ions

    Science.gov (United States)

    Wu, H.; Rusek, A.; Hada, M.

    2006-01-01

    The space environment consists of a varying field of radiation particles including high-energy ions, with spacecraft shielding material providing the major protection to astronauts from harmful exposure. Unlike low-LET gamma or X-rays, the presence of shielding does not always reduce the radiation risks for energetic charged particle exposure. Since the dose delivered by the charged particle increases sharply as the particle approaches the end of its range, a position known as the Bragg peak, the Bragg curve does not necessarily represent the biological damage along the particle traversal since biological effects are influenced by the track structure of both primary and secondary particles. Therefore, the biological Bragg curve is dependent on the energy and the type of the primary particle, and may vary for different biological endpoints. We studied micronuclei (MN) induction across the Bragg curve of Si and Fe ions at incident energies of 300 MeV/nucleon and 1 GeV/nucleon. A quantitative biological response curve did not reveal an increased yield of MN at the location of the Bragg peak. However, the ratio of mono- to bi-nucleated cells, which indicates inhibition in cell progression, increased at the Bragg peak location. These results confirm the hypothesis that severely damaged cells at the Bragg peak are likely to go through reproduction death.

  18. Molecular dynamics simulations to examine structure, energetics, and evaporation/condensation dynamics in small charged clusters of water or methanol containing a single monatomic ion.

    Science.gov (United States)

    Daub, Christopher D; Cann, Natalie M

    2012-11-01

    We study small clusters of water or methanol containing a single Ca(2+), Na(+), or Cl(-) ion with classical molecular dynamics simulations, using models that incorporate polarizability via the Drude oscillator framework. Evaporation and condensation of solvent from these clusters is examined in two systems, (1) for isolated clusters initially prepared at different temperatures and (2) those with a surrounding inert (Ar) gas of varying temperature. We examine these clusters over a range of sizes, from almost bare ions up to 40 solvent molecules. We report data on the evaporation and condensation of solvent from the clusters and argue that the observed temperature dependence of evaporation in the smallest clusters demonstrates that the presence of heated gas alone cannot, in most cases, solely account for bare ion production in electrospray ionization (ESI), neglecting the key contribution of the electric field. We also present our findings on the structure and energetics of the clusters as a function of size. Our data agree well with the abundant literature on hydrated ion clusters and offer some novel insight into the structure of methanol and ion clusters, especially those with a Cl(-) anion, where we observe the presence of chain-like structures of methanol molecules. Finally, we provide some data on the reparameterizations necessary to simulate ions in methanol using the separately developed Drude oscillator models for methanol and for ions in water.

  19. Gaussian-Based Smooth Dielectric Function: A Surface-Free Approach for Modeling Macromolecular Binding in Solvents

    Directory of Open Access Journals (Sweden)

    Arghya Chakravorty

    2018-03-01

    Full Text Available Conventional modeling techniques to model macromolecular solvation and its effect on binding in the framework of Poisson-Boltzmann based implicit solvent models make use of a geometrically defined surface to depict the separation of macromolecular interior (low dielectric constant from the solvent phase (high dielectric constant. Though this simplification saves time and computational resources without significantly compromising the accuracy of free energy calculations, it bypasses some of the key physio-chemical properties of the solute-solvent interface, e.g., the altered flexibility of water molecules and that of side chains at the interface, which results in dielectric properties different from both bulk water and macromolecular interior, respectively. Here we present a Gaussian-based smooth dielectric model, an inhomogeneous dielectric distribution model that mimics the effect of macromolecular flexibility and captures the altered properties of surface bound water molecules. Thus, the model delivers a smooth transition of dielectric properties from the macromolecular interior to the solvent phase, eliminating any unphysical surface separating the two phases. Using various examples of macromolecular binding, we demonstrate its utility and illustrate the comparison with the conventional 2-dielectric model. We also showcase some additional abilities of this model, viz. to account for the effect of electrolytes in the solution and to render the distribution profile of water across a lipid membrane.

  20. Production of highly ionized recoil ions in heavy ion impact

    International Nuclear Information System (INIS)

    Tawara, H.; Tonuma, T.; Be, S.H.; Shibata, H.; Kase, M.; Kambara, T.; Kumagai, H.; Kohno, I.

    1985-01-01

    The production mechanisms of highly ionized recoil ions in energetic, highly charged heavy ion impact are compared with those in photon and electron impact. In addition to the innershell ionization processes which are important in photon and electron impact, the electron transfer processes are found to play a key role in heavy ion impact. In molecular targets are also observed highly ionized monoatomic ions which are believed to be produced through production of highly ionized molecular ions followed by prompt dissociation. The observed N 6+ ions produced in 1.05MeV/amu Ar 12+ ions on N 2 molecules are produced through, for example, N 2 12+ *→N 6+ +N 6+ process. (author)

  1. High-energy particle production in solar flares (SEP, gamma-ray and neutron emissions). [solar energetic particles

    Science.gov (United States)

    Chupp, E. L.

    1987-01-01

    Electrons and ions, over a wide range of energies, are produced in association with solar flares. Solar energetic particles (SEPs), observed in space and near earth, consist of electrons and ions that range in energy from 10 keV to about 100 MeV and from 1 MeV to 20 GeV, respectively. SEPs are directly recorded by charged particle detectors, while X-ray, gamma-ray, and neutron detectors indicate the properties of the accelerated particles (electrons and ions) which have interacted in the solar atmosphere. A major problem of solar physics is to understand the relationship between these two groups of charged particles; in particular whether they are accelerated by the same mechanism. The paper reviews the physics of gamma-rays and neutron production in the solar atmosphere and the method by which properties of the primary charged particles produced in the solar flare can be deduced. Recent observations of energetic photons and neutrons in space and at the earth are used to present a current picture of the properties of impulsively flare accelerated electrons and ions. Some important properties discussed are time scale of production, composition, energy spectra, accelerator geometry. Particular attention is given to energetic particle production in the large flare on June 3, 1982.

  2. A public database of macromolecular diffraction experiments.

    Science.gov (United States)

    Grabowski, Marek; Langner, Karol M; Cymborowski, Marcin; Porebski, Przemyslaw J; Sroka, Piotr; Zheng, Heping; Cooper, David R; Zimmerman, Matthew D; Elsliger, Marc André; Burley, Stephen K; Minor, Wladek

    2016-11-01

    The low reproducibility of published experimental results in many scientific disciplines has recently garnered negative attention in scientific journals and the general media. Public transparency, including the availability of `raw' experimental data, will help to address growing concerns regarding scientific integrity. Macromolecular X-ray crystallography has led the way in requiring the public dissemination of atomic coordinates and a wealth of experimental data, making the field one of the most reproducible in the biological sciences. However, there remains no mandate for public disclosure of the original diffraction data. The Integrated Resource for Reproducibility in Macromolecular Crystallography (IRRMC) has been developed to archive raw data from diffraction experiments and, equally importantly, to provide related metadata. Currently, the database of our resource contains data from 2920 macromolecular diffraction experiments (5767 data sets), accounting for around 3% of all depositions in the Protein Data Bank (PDB), with their corresponding partially curated metadata. IRRMC utilizes distributed storage implemented using a federated architecture of many independent storage servers, which provides both scalability and sustainability. The resource, which is accessible via the web portal at http://www.proteindiffraction.org, can be searched using various criteria. All data are available for unrestricted access and download. The resource serves as a proof of concept and demonstrates the feasibility of archiving raw diffraction data and associated metadata from X-ray crystallographic studies of biological macromolecules. The goal is to expand this resource and include data sets that failed to yield X-ray structures in order to facilitate collaborative efforts that will improve protein structure-determination methods and to ensure the availability of `orphan' data left behind for various reasons by individual investigators and/or extinct structural genomics

  3. Characteristics of Solar Energetic Ions as a Function of Longitude

    Energy Technology Data Exchange (ETDEWEB)

    Cohen, C. M. S.; Mewaldt, R. A. [California Institute of Technology, MC 290-17, Pasadena, CA 91125 (United States); Mason, G. M., E-mail: cohen@srl.caltech.edu [Johns Hopkins University/Applied Physics Laboratory, Laurel, MD 20723 (United States)

    2017-07-10

    Since the 2006 launch of STEREO , multi-spacecraft studies have yielded several surprising results regarding the spread of solar energetic particles (SEPs) within the inner heliosphere. We have investigated the role of energy and ridigity, using ACE and STEREO 10 MeV n{sup −1} oxygen data to identify 41 large SEP events observed by two or three spacecraft. We calculated fluence spectra from ∼0.1 to >10 MeV n{sup −1} for H, He, O, and Fe for each event at the observing spacecraft (including SOHO and GOES ). The particle fluences at 0.3, 1, and 10 MeV n{sup −1} were examined as a function of the distance between the associated solar flare longitude and the spacecraft magnetic footpoints at the Sun to determine the longitudinal spread of particles and study how the distribution centers and widths depend on energy and charge-to-mass (Q/M) for the first time. On average, the three-spacecraft event distributions were centered at 22 ± 4° west of the flare site and were 43 ± 1° wide, though there was substantial variability, while the fit to the aggregate of the two-spacecraft event fluences yielded significantly wider distributions at 0.3 and 1 MeV n{sup −1}. The widths derived from both the three- and two-spacecraft events show an energy dependence with distributions narrowing with increasing energy, consistent with lower energy ions experiencing more field line co-rotation, or being accelerated over a larger portion of the CME-driven shock or for longer times as the shock expands. Surprisingly, no clear evidence was found for a Q/M dependence to the widths or centers suggesting that rigidity-related processes are not the dominant means of spreading particles in longitude.

  4. ITER Plasma at Electron Cyclotron Frequency Domain: Stimulated Raman Scattering off Gould-Trivelpiece Modes and Generation of Suprathermal Electrons and Energetic Ions

    Science.gov (United States)

    Stefan, V. Alexander

    2011-04-01

    Stimulated Raman scattering in the electron cyclotron frequency range of the X-Mode and O-Mode driver with the ITER plasma leads to the ``tail heating'' via the generation of suprathermal electrons and energetic ions. The scattering off Trivelpiece-Gould (T-G) modes is studied for the gyrotron frequency of 170GHz; X-Mode and O-Mode power of 24 MW CW; on-axis B-field of 10T. The synergy between the two-plasmon decay and Raman scattering is analyzed in reference to the bulk plasma heating. Supported in part by Nikola TESLA Labs, La Jolla, CA

  5. Study on fast ion loss in HL-2A tokamak

    International Nuclear Information System (INIS)

    Liu Yi; Sun Tengfei; Ji Xiaoquan

    2012-01-01

    Experiments with a high-energy deuterium neutral beam (NB) injection (30 keV, about 0.6 MW) were performed on the HL-2A tokamak. Analysis of neutron decay following the NB 'blip' injection indicates that tangentially injected beam ions are well confined, slowing down classically in the HL-2A. Anomalous losses of beam ions were observed when a beta-induced Alfven acoustic (BAAE) mode was present in the plasma. Such a high energetic particle driven mode led to fast-ion loss, showing a strong influence of the energetic particle driven mode on the fast-ion transport. (authors)

  6. Energetic particle counterparts for geomagnetic pulsations of Pc1 and IPDP types

    Directory of Open Access Journals (Sweden)

    T. A. Yahnina

    Full Text Available Using the low-altitude NOAA satellite particle data, we study two kinds of localised variations of energetic proton fluxes at low altitude within the anisotropic zone equatorward of the isotropy boundary. These flux variation types have a common feature, i.e. the presence of precipitating protons measured by the MEPED instrument at energies more than 30 keV, but they are distinguished by the fact of the presence or absence of the lower-energy component as measured by the TED detector on board the NOAA satellite. The localised proton precipitating without a low-energy component occurs mostly in the morning-day sector, during quiet geomagnetic conditions, without substorm injections at geosynchronous orbit, and without any signatures of plasmaspheric plasma expansion to the geosynchronous distance. This precipitation pattern closely correlates with ground-based observations of continuous narrow-band Pc1 pulsations in the frequency range 0.1–2 Hz (hereafter Pc1. The precipitation pattern containing the low energy component occurs mostly in the evening sector, under disturbed geomagnetic conditions, and in association with energetic proton injections and significant increases of cold plasma density at geosynchronous orbit. This precipitation pattern is associated with geomagnetic pulsations called Intervals of Pulsations with Diminishing Periods (IPDP, but some minor part of the events is also related to narrow-band Pc1. Both Pc1 and IPDP pulsations are believed to be the electromagnetic ion-cyclotron waves generated by the ion-cyclotron instability in the equatorial plane. These waves scatter energetic protons in pitch angles, so we conclude that the precipitation patterns studied here are the particle counterparts of the ion-cyclotron waves.

    Key words. Ionosphere (particle precipitation – Magnetospheric physics (energetic particles, precipitating – Space plasma physics (wave-particle interactions

  7. Energetic particle counterparts for geomagnetic pulsations of Pc1 and IPDP types

    Directory of Open Access Journals (Sweden)

    T. A. Yahnina

    2003-12-01

    Full Text Available Using the low-altitude NOAA satellite particle data, we study two kinds of localised variations of energetic proton fluxes at low altitude within the anisotropic zone equatorward of the isotropy boundary. These flux variation types have a common feature, i.e. the presence of precipitating protons measured by the MEPED instrument at energies more than 30 keV, but they are distinguished by the fact of the presence or absence of the lower-energy component as measured by the TED detector on board the NOAA satellite. The localised proton precipitating without a low-energy component occurs mostly in the morning-day sector, during quiet geomagnetic conditions, without substorm injections at geosynchronous orbit, and without any signatures of plasmaspheric plasma expansion to the geosynchronous distance. This precipitation pattern closely correlates with ground-based observations of continuous narrow-band Pc1 pulsations in the frequency range 0.1–2 Hz (hereafter Pc1. The precipitation pattern containing the low energy component occurs mostly in the evening sector, under disturbed geomagnetic conditions, and in association with energetic proton injections and significant increases of cold plasma density at geosynchronous orbit. This precipitation pattern is associated with geomagnetic pulsations called Intervals of Pulsations with Diminishing Periods (IPDP, but some minor part of the events is also related to narrow-band Pc1. Both Pc1 and IPDP pulsations are believed to be the electromagnetic ion-cyclotron waves generated by the ion-cyclotron instability in the equatorial plane. These waves scatter energetic protons in pitch angles, so we conclude that the precipitation patterns studied here are the particle counterparts of the ion-cyclotron waves.Key words. Ionosphere (particle precipitation – Magnetospheric physics (energetic particles, precipitating – Space plasma physics (wave-particle interactions

  8. Los Alamos energetic particle sensor systems at geostationary orbit

    International Nuclear Information System (INIS)

    Baker, D.N.; Aiello, W.; Asbridge, J.R.; Belian, R.D.; Higbie, P.R.; Klebesadel, R.W.; Laros, J.G.; Tech, E.R.

    1985-01-01

    The Los Alamos National Laboratory has provided energetic particle sensors for a variety of spacecraft at the geostationary orbit (36,000 km altitude). The sensor system called the Charged Particle Analyzer (CPA) consists of four separate subsystems. The LoE and HiE subsystems measure electrons in the energy ranges 30 to 300 keV and 200 to 2000 keV, respectively. The LoP and HiP subsystems measure ions in the ranges 100 to 600 keV and 0.40 to 150 MeV, respectively. A separate sensor system called the spectrometer for energetic electrons (SEE) measures very high-energy electrons (2 to 15 MeV) using advanced scintillator design. In this paper we describe the relationship of operational anomalies and spacecraft upsets to the directly measured energetic particle environments at 6.6 R/sub E/. We also compare and contrast the CPA and SEE instrument design characteristics with the next generation of Los Alamos instruments to be flown at geostationary altitudes

  9. Gas phase ion chemistry

    CERN Document Server

    Bowers, Michael T

    1979-01-01

    Gas Phase Ion Chemistry, Volume 2 covers the advances in gas phase ion chemistry. The book discusses the stabilities of positive ions from equilibrium gas-phase basicity measurements; the experimental methods used to determine molecular electron affinities, specifically photoelectron spectroscopy, photodetachment spectroscopy, charge transfer, and collisional ionization; and the gas-phase acidity scale. The text also describes the basis of the technique of chemical ionization mass spectrometry; the energetics and mechanisms of unimolecular reactions of positive ions; and the photodissociation

  10. Energetic Particles: From Sun to Heliosphere - and vice versa

    Science.gov (United States)

    Wimmer-Schweingruber, R. F.; Rodriguez-Pacheco, J.; Boden, S.; Boettcher, S. I.; Cernuda, I.; Dresing, N.; Drews, C.; Droege, W.; Espinosa Lara, F.; Gomez-Herrero, R.; Heber, B.; Ho, G. C.; Klassen, A.; Kulkarni, S. R.; Mann, G. J.; Martin-Garcia, C.; Mason, G. M.; Panitzsch, L.; Prieto, M.; Sanchez, S.; Terasa, C.; Eldrum, S.

    2017-12-01

    Energetic particles in the heliosphere can be measured at their elevated energetic status after three processes: injection, acceleration, and transport. Suprathermal seed particles have speeds well above the fast magnetosonic speed in the solar wind frame of reference and can vary from location to location and within the solar activity cycle. Acceleration sites include reconnecting current sheets in solar flares or magnetspheric boundaries, shocks in the solar corona, heliosphere and a planetary obstacles, as well as planetary magnetospheres. Once accelerated, particles are transported from the acceleration site into and through the heliosphere. Thus, by investigating properties of energetic particles such as their composition, energy spectra, pitch-angle distribution, etc. one can attempt to distinguish their origin or injection and acceleration site. This in turn allows us to better understand transport effects whose underlying microphysics is also a key ingredient in the acceleration of particles. In this presentation we will present some clear examples which link energetic particles from their observing site to their source locations. These include Jupiter electrons, singly-charged He ions from CIRs, and 3He from solar flares. We will compare these examples with the measurement capabilities of the Energetic Particle Detector (EPD) on Solar Orbiter and consider implications for the key science goal of Solar Orbiter and Solar Proble Plus - How the Sun creates and controls the heliosphere.

  11. Substorm-associated injections of energetic ions observed by GEOS-1 and ATS-6 in and near synchronous altitude

    International Nuclear Information System (INIS)

    Wilken, B.; Fritz, T.A.; Korth, A.; Kremser, G.

    1978-01-01

    Energetic ion measurements and GEOS-1 and ATS-6 are analysed for the period of geomagnetic activity following the arrival of a solar wind shock at 0027 UT on July 29, 1977. GEOS crossed the magnetopause at 6.9 Rsub(E) and 0027 UT (1312 LT). Although the difference in local time to ATS at 6.6 Rsub(E) is only 2h ATS seems to remain well inside the magnetopause. During the second orbital pass on this day GEOS crossed the geostationary orbit at the onset time of a major substorm developing at 1120 UT. At this time the local time difference of GEOS and ATS was 12 h. The considerably different energy dispersions are discussed. An azimuthal anisotropy of approximately 20% observed in the GEOS data is interpreted to be the result of a particle density gradient. (Auth.)

  12. Energetically resolved multiple-fluid equilibria of tokamak plasmas

    International Nuclear Information System (INIS)

    Hole, M J; Dennis, G

    2009-01-01

    In many magnetically confined fusion experiments, a significant fraction of the stored energy of the plasma resides in energetic, or non-thermal, particle populations. Despite this, most equilibrium treatments are based on MHD: a single fluid treatment which assumes a Maxwell-Boltzmann distribution function. Detailed magnetic reconstruction based on this treatment ignore the energetic complexity of the plasma and can result in model-data inconsistencies, such as thermal pressure profiles which are inconsistent with the total stored kinetic energy of the plasma. Alternatively, ad hoc corrections to the pressure profile, such as summing the energetic and thermal pressures, have poor theoretical justification. Motivated by this omission, we generalize ideal MHD one step further: we consider multiple quasi-neutral fluids, each in thermal equilibrium and each thermally insulated from each other-no population mixing occurs. Kinetically, such a model may be able to describe the ion or electron distribution function in regions of velocity phase space with a large number of particles, at the expense of more weakly populated phase space, which may have uncharacteristically high temperature and hence pressure. As magnetic equilibrium effects increase with the increase in pressure, our work constitutes an upper limit to the effect of energetic particles. When implemented into an existing solver, FLOW (Guazzotto et al 2004 Phys. Plasmas 11, 604-14), it becomes possible to qualitatively explore the impact of resolving the energetic populations on plasma equilibrium configurations in realistic geometry. Deploying the modified code, FLOW-M, on a high performance spherical torus configuration, we find that the effect of variations of the pressure, poloidal flow and toroidal flow of the energetic populations is qualitatively similar to variations in the background plasma. We also study the robustness of the equilibrium to uncertainties in the current profile and the energetic

  13. Scintillator-based diagnostic for fast ion loss measurements on DIII-D

    International Nuclear Information System (INIS)

    Fisher, R. K.; Van Zeeland, M. A.; Pace, D. C.; Heidbrink, W. W.; Muscatello, C. M.; Zhu, Y. B.; Garcia-Munoz, M.

    2010-01-01

    A new scintillator-based fast ion loss detector has been installed on DIII-D with the time response (>100 kHz) needed to study energetic ion losses induced by Alfven eigenmodes and other MHD instabilities. Based on the design used on ASDEX Upgrade, the diagnostic measures the pitch angle and gyroradius of ion losses based on the position of the ions striking the two-dimensional scintillator. For fast time response measurements, a beam splitter and fiberoptics couple a portion of the scintillator light to a photomultiplier. Reverse orbit following techniques trace the lost ions to their possible origin within the plasma. Initial DIII-D results showing prompt losses and energetic ion loss due to MHD instabilities are discussed.

  14. Relaxation behavior of ion conducting glasses

    International Nuclear Information System (INIS)

    Bunde, A.; Dieterich, W.; Maass, P.; Meyer, M.

    1997-01-01

    We investigate by Monte Carlo simulations the diffusion of ions in an energetically disordered lattice, where the Coulomb interaction between the mobile ions is explicitly taken into account. We show that the combined effect of Coulomb interaction and disorder can account for the ionic ac-conductivity in glasses and the recently discovered non-Arrhenius behavior of the dc-conductivity in glassy fast ionic conductors. Our results suggest that glassy ionic conductors can be optimized by lowering the strength of the energetic disorder but that the ionic interaction effects set an upper bound for the conductivity at high temperatures. (author)

  15. Response of energetic particles to local magnetic dipolarization inside geosynchronous orbit

    Science.gov (United States)

    Motoba, T.; Ohtani, S.; Gkioulidou, M.; Takahashi, K.

    2017-12-01

    Magnetic field dipolarization and energetic particle injections are the most distinct phenomena observed in the inner magnetosphere during the substorm expansion phase. Compared to a wealth of knowledge about the phenomenology of magnetic dipolarizations and particle injections at/outside geosynchronous orbit (GEO), our understanding of them inside GEO remains incomplete because of a very limited number of previous studies. In the present study, we statistically examine the response of 1-1000 keV energetic particles to local magnetic dipolarization by performing a superposed epoch analysis of energetic particle fluxes with the zero epoch defined as the dipolarization onset times. Based on data from the Van Allen Probes tail seasons in 2012-2016, we identified a total of 97 magnetic dipolarization events which occurred closer to the magnetic equator (i.e., BH, which is antiparallel to the Earth's dipole axis, is the dominant component of the local magnetic field at least for 5 min before the onset). For major ion species (hydrogen, helium, and oxygen ions), the relative flux intensity to the pre-onset level increases at > 50 keV and decreases at inverse energy dispersion. For dipolarizations with strong impulsive westward electric fields, the relative electron flux intensity increases up to 5-10 times, in particular most significant at several tens of keV. This result suggests that the impulsive electric field acts as an efficient factor in the rapid energization of the tens-of-keV electrons. We also discuss how the response of energetic particles to dipolarization depends on MLT, radial distance, and pitch angle.

  16. Macromolecular Networks Containing Fluorinated Cyclic Moieties

    Science.gov (United States)

    2015-12-12

    Briefing Charts 3. DATES COVERED (From - To) 17 Nov 2015 – 12 Dec 2015 4. TITLE AND SUBTITLE Macromolecular Networks Containing Fluorinated Cyclic... FLUORINATED CYCLIC MOIETIES 12 December 2015 Andrew J. Guenthner,1 Scott T. Iacono,2 Cynthia A. Corley,2 Christopher M. Sahagun,3 Kevin R. Lamison,4...Reinforcements Good Flame, Smoke, & Toxicity Characteristics Low Water Uptake with Near Zero Coefficient of Hygroscopic Expansion ∆ DISTRIBUTION A

  17. Interactions of energetic particles and clusters with solids

    International Nuclear Information System (INIS)

    Averback, R.S.; Hsieh, Horngming; Benedek, R.

    1990-12-01

    Ion beams are being applied for surface modifications of materials in a variety of different ways: ion implantation, ion beam mixing, sputtering, and particle or cluster beam-assisted deposition. Fundamental to all of these processes is the deposition of a large amount of energy, generally some keV's, in a localized area. This can lead to the production of defects, atomic mixing, disordering and in some cases, amorphization. Recent results of molecular dynamics computer simulations of energetic displacement cascades in Cu and Ni with energies up to 5 keV suggest that thermal spikes play an important role in these processes. Specifically, it will be shown that many aspects of defect production, atomic mixing and ''cascade collapse'' can be understood as a consequence of local melting of the cascade core. Included in this discussion will be the possible role of electron-phonon coupling in thermal spike dynamics. The interaction of energetic clusters of atoms with solid surfaces has also been studied by molecular dynamics simulations. this process is of interest because a large amount of energy can be deposited in a small region and possibly without creating point defects in the substrate or implanting cluster atoms. The simulations reveal that the dynamics of the collision process are strongly dependent on cluster size and energy. Different regimes where defect production, local melting and plastic flow dominate will be discussed. 43 refs., 7 figs

  18. Design and application of a C++ macromolecular class library.

    Science.gov (United States)

    Chang, W; Shindyalov, I N; Pu, C; Bourne, P E

    1994-01-01

    PDBlib is an extensible object oriented class library written in C++ for representing the 3-dimensional structure of biological macromolecules. PDBlib forms the kernel of a larger software framework being developed for assiting in knowledge discovery from macromolecular structure data. The software design strategy used by PDBlib, how the library may be used and several prototype applications that use the library are summarized. PDBlib represents the structural features of proteins, DNA, RNA, and complexes thereof, at a level of detail on a par with that which can be parsed from a Protein Data Bank (PDB) entry. However, the memory resident representation of the macromolecule is independent of the PDB entry and can be obtained from other back-end data sources, for example, existing relational databases and our own object oriented database (OOPDB) built on top of the commercial object oriented database, ObjectStore. At the front-end are several prototype applications that use the library: Macromolecular Query Language (MMQL) is based on a separate class library (MMQLlib) for building complex queries pertaining to macromolecular structure; PDBtool is an interactive structure verification tool; and PDBview, is a structure rendering tool used either as a standalone tool or as part of another application. Each of these software components are described. All software is available via anonymous ftp from cuhhca.hhmi.columbia.edu.

  19. Simulation of charge generation and transport in semi-conductors under energetic-particle bombardment

    International Nuclear Information System (INIS)

    Martin, R.C.

    1990-01-01

    The passage of energetic ions through semiconductor devices generates excess charge which can produce logic upset, memory change, and device damage. This single event upset (SEU) phenomenon is increasingly important for satellite communications. Experimental and numerical simulation of SEUs is difficult because of the subnanosecond times and large charge densities within the ion track. The objective of this work is twofold: (1) the determination of the track structure and electron-hole pair generation profiles following the passage of an energetic ion; (2) the development and application of a new numerical method for transient charge transport in semiconductor devices. A secondary electron generation and transport model, based on the Monte Carlo method, is developed and coupled to an ion transport code to simulate ion track formation in silicon. A new numerical method is developed for the study of transient charge transport. The numerical method combines an axisymmetric quadratic finite-element formulation for the solution of the potential with particle simulation methods for electron and hole transport. Carrier transport, recombination, and thermal generation of both majority and minority carriers are included. To assess the method, transient one-dimensional solutions for silicon diodes are compared to a fully iterative finite-element method. Simulations of charge collection from ion tracks in three-dimensional axisymmetric devices are presented and compared to previous work. The results of this work for transient current pulses following charged ion passage are in agreement with recent experimental data

  20. Cassini MIMI Close-Up of Saturn Energetic Particles: Low Altitude Trapped Radiation, Auroral Ion Acceleration, and Interchange Flow Channels

    Science.gov (United States)

    Mitchell, D. G.; Krimigis, S. M.; Krupp, N.; Paranicas, C.; Roussos, E.; Kollmann, P.

    2017-12-01

    We present observations from the final orbits of the Cassini Mission at Saturn by the Magnetospheric Imaging Instrument (MIMI). Crossing inside the D-Ring at the equator and just above Saturn's atmosphere, these orbits covered regions never visited previously in the mission. Highlights include the confirmation of an inner radiation belt analogous to the inner radiation belt at Earth by the Low Energy Magnetospheric Measurement System (LEMMS), with surprising twists—Saturn's D-ring material appears to be a source for these particles. Details will be presented in another session. The Grand Finale orbits also afforded a close-up view of the auroral ion acceleration regions by the Ion and Neutral Camera (INCA). Ionospheric ions at the base of auroral field lines are accelerated perpendicular to the magnetic field to 10's and 100's of keV, and charge exchange with exospheric neutrals to be emitted as energetic neutral atoms and images by INCA. We show that this acceleration region lies at about 0.1 Rs. Another feature seen previously in the mission but imaged with greater resolution is a flow channel associated with interchange motion in the middle magnetosphere. We show this feature to extend over several Saturn radii in the radial direction, and over about 2 Saturn radii azimuthally. Additional data have been received since the writing of this abstract and before Cassini's plunge into the atmosphere on September 15, so additional features may be presented.

  1. Energetic Particles of keV–MeV Energies Observed near Reconnecting Current Sheets at 1 au

    Energy Technology Data Exchange (ETDEWEB)

    Khabarova, Olga V. [Heliophysical Laboratory, Pushkov Institute of Terrestrial Magnetism, Ionosphere and Radio Wave Propagation of the Russian Academy of Sciences (IZMIRAN), Moscow (Russian Federation); Zank, Gary P. [Center for Space Plasma and Aeronomic Research (CSPAR), University of Alabama in Huntsville, Huntsville, AL 35805 (United States)

    2017-07-01

    We provide evidence for particle acceleration up to ∼5 MeV at reconnecting current sheets in the solar wind based on both case studies and a statistical analysis of the energetic ion and electron flux data from the five Advanced Composition Explorer Electron, Proton, and Alpha Monitor (EPAM) detectors. The case study of a typical reconnection exhaust event reveals (i) a small-scale peak of the energetic ion flux observed in the vicinity of the reconnection exhaust and (ii) a long-timescale atypical energetic particle event (AEPE) encompassing the reconnection exhaust. AEPEs associated with reconnecting strong current sheets last for many hours, even days, as confirmed by statistical studies. The case study shows that time-intensity profiles of the ion flux may vary significantly from one EPAM detector to another partially because of the local topology of magnetic fields, but mainly because of the impact of upstream magnetospheric events; therefore, the occurrence of particle acceleration can be hidden. The finding of significant particle energization within a time interval of ±30 hr around reconnection exhausts is supported by a superposed epoch analysis of 126 reconnection exhaust events. We suggest that energetic particles initially accelerated via prolonged magnetic reconnection are trapped and reaccelerated in small- or medium-scale magnetic islands surrounding the reconnecting current sheet, as predicted by the transport theory of Zank et al. Other mechanisms of initial particle acceleration can contribute also.

  2. MULTI-SPACECRAFT ANALYSIS OF ENERGETIC HEAVY ION AND INTERPLANETARY SHOCK PROPERTIES IN ENERGETIC STORM PARTICLE EVENTS NEAR 1 au

    Energy Technology Data Exchange (ETDEWEB)

    Ebert, R. W.; Dayeh, M. A.; Desai, M. I. [Southwest Research Institute, 6220 Culebra Road, San Antonio, TX 78238 (United States); Jian, L. K. [Department of Astronomy, University of Maryland, College Park, MD 20742 (United States); Li, G. [The Center for Space Plasma and Aeronomic Research (CSPAR), University of Alabama in Huntsville, Huntsville, AL 35756 (United States); Mason, G. M., E-mail: rebert@swri.edu [Johns Hopkins University/Applied Physics Laboratory, Laurel, MD 20273 (United States)

    2016-11-10

    We examine the longitude distribution of and relationship between interplanetary (IP) shock properties and ∼0.1–20 MeV nucleon{sup -1} O and Fe ions during seven multi-spacecraft energetic storm particle (ESP) events at 1 au. These ESP events were observed at two spacecraft and were primarily associated with low Mach number, quasi-perpendicular shocks. Key observations include the following: (i) the Alfvén Mach number increased from east to west of the coronal mass ejection source longitude, while the shock speed, compression ratios, and obliquity showed no clear dependence; (ii) the O and Fe time intensity profiles and peak intensities varied significantly between longitudinally separated spacecraft observing the same event, the peak intensities being larger near the nose and smaller along the flank of the IP shock; (iii) the O and Fe peak intensities had weak to no correlations with the shock parameters; (iv) the Fe/O time profiles showed intra-event variations upstream of the shock that disappeared downstream of the shock, where values plateaued to those comparable to the mean Fe/O of solar cycle 23; (v) the O and Fe spectral index ranged from ∼1.0 to 3.4, the Fe spectra being softer in most events; and (vi) the observed spectral index was softer than the value predicted from the shock compression ratio in most events. We conclude that while the variations in IP shock properties may account for some variations in O and Fe properties within these multi-spacecraft events, detailed examination of the upstream seed population and IP turbulence, along with modeling, are required to fully characterize these observations.

  3. Energetic particle physics in JT-60U and JFT-2M

    Energy Technology Data Exchange (ETDEWEB)

    Shinohara, K [Naka Fusion Research Establishment, Japan Atomic Energy Research Institute, Naka, Ibaraki, 311-0193 (Japan); Takechi, M [Naka Fusion Research Establishment, Japan Atomic Energy Research Institute, Naka, Ibaraki, 311-0193 (Japan); Ishikawa, M [Naka Fusion Research Establishment, Japan Atomic Energy Research Institute, Naka, Ibaraki, 311-0193 (Japan); Kusama, Y [Naka Fusion Research Establishment, Japan Atomic Energy Research Institute, Naka, Ibaraki, 311-0193 (Japan); Tsuzuki, K [Naka Fusion Research Establishment, Japan Atomic Energy Research Institute, Naka, Ibaraki, 311-0193 (Japan); Urata, K [Naka Fusion Research Establishment, Japan Atomic Energy Research Institute, Naka, Ibaraki, 311-0193 (Japan); Kawashima, H [Naka Fusion Research Establishment, Japan Atomic Energy Research Institute, Naka, Ibaraki, 311-0193 (Japan); Tobita, K [Naka Fusion Research Establishment, Japan Atomic Energy Research Institute, Naka, Ibaraki, 311-0193 (Japan); Fukuyama, A [Department of Nuclear Engineering, Kyoto University, 606-8501, (Japan); Cheng, C Z [Princeton Plasma Physics Laboratory, PO Box 451, Princeton, NJ 08543 (United States); Darrow, D S [Princeton Plasma Physics Laboratory, PO Box 451, Princeton, NJ 08543 (United States); Kramer, G J [Princeton Plasma Physics Laboratory, PO Box 451, Princeton, NJ 08543 (United States); Gorelenkov, N N [Princeton Plasma Physics Laboratory, PO Box 451, Princeton, NJ 08543 (United States); Nazikian, R [Princeton Plasma Physics Laboratory, PO Box 451, Princeton, NJ 08543 (United States); Todo, Y [National Institute for Fusion Science, Oroshi-cho, Toki, Gifu, 509-5292, (Japan); Miura, Y [Naka Fusion Research Establishment, Japan Atomic Energy Research Institute, Naka, Ibaraki, 311-0193 (Japan); Ozeki, T [Naka Fusion Research Establishment, Japan Atomic Energy Research Institute, Naka, Ibaraki, 311-0193 (Japan)

    2004-07-01

    Recent energetic particle physics research in JT-60U and JFT-2M is reported. Alfven eigenmodes (AEs) are investigated in reversed-shear (RS) plasmas in JT-60U where frequency sweeping (FS) modes are observed to follow the q-profile evolution. The RS-induced AE model can explain the FS of the modes within the context of an evolving q-profile. Enhanced energetic ion transport is also investigated with the appearance of modes in the toroidicity-induced AE range of frequency in JT-60U using a multi-channel neutron profile monitor and in JFT-2M using a lost ion probe. Additionally, the ripple loss in the complex toroidal field ripple due to ferritic steel inserts in JFT-2M is shown and compared with model analysis. The simulation code developed to predict ripple loss in JFT-2M will be of use in estimating the heat flux in the complex ripple field of a future device such as ITER.

  4. Excitation of internal kink modes by trapped energetic beam ions

    International Nuclear Information System (INIS)

    Chen, L.; White, R.B.; Rosenbluth, M.N.

    1983-10-01

    Energetic trapped particles are shown to have a destabilizing effect on the internal kink mode in tokamaks. The plasma pressure threshold for the mode is lowered by the particles. The growth rate is near the ideal magnetohydrodynamic value, but the frequency is comparable to the trapped particle precission frequency. A model for the instability cycle gives stability properties, associated particle losses, and neutron emissivity consistent with the fishbone events observed in PDX

  5. Anisotropy and linear polarization of radiative processes in energetic ion-atom collisions; Untersuchung zur Anisotropie und linearen Polarisation radiativer Prozesse in energiereichen Ion-Atom-Stoessen

    Energy Technology Data Exchange (ETDEWEB)

    Weber, Guenter

    2010-06-16

    In the present thesis the linear polarization of radiation emitted in energetic ion-atom collisions at the ESR storage ring was measured by applying a novel type of position, timing and energy sensitive X-ray detector as a Compton polarimeter. In contrast to previous measurements, that mainly concentrate on studies of the spectral and angular distribution, the new detectors allowed the first polarization study of the Ly-{alpha}{sub 1} radiation (2p{sub 3/2}{yields}1s{sub 1/2}) in U{sup 91+}. Owing to the high precision of the polarimeters applied here, the experimental results indicate a significant depolarization of the Ly-{alpha}{sub 1} radiation caused by the interference of the E1 and M2 transition branches. Moreover, the current investigation shows that measurements of the linear polarization in combination with angular distribution studies provide a model-independent probe for the ratio of the E1 and M2 transition amplitudes and, consequently, of the corresponding transition probabilities. In addition, a first measurement of the linear polarization as well as an angular distribution study of the electron-nucleus Bremsstrahlung arising from ion-atom collisions was performed. The experimental results obtained were compared to exact relativistic calculations and, in case of the Bremsstrahlung, to a semirelativistic treatment. In general, good agreement was found between theoretical predictions and experimental findings. (orig.)

  6. Ion Beams in Nanoscience and Technology

    CERN Document Server

    Hellborg, Ragnar

    2010-01-01

    Energetic ion beam irradiation is the basis of a wide plethora of powerful research- and fabrication-techniques for materials characterisation and processing on a nanometre scale. This book is suitable for practitioners, researchers and graduate students working in the field of ion beams and application

  7. Principles and Overview of Sampling Methods for Modeling Macromolecular Structure and Dynamics.

    Science.gov (United States)

    Maximova, Tatiana; Moffatt, Ryan; Ma, Buyong; Nussinov, Ruth; Shehu, Amarda

    2016-04-01

    Investigation of macromolecular structure and dynamics is fundamental to understanding how macromolecules carry out their functions in the cell. Significant advances have been made toward this end in silico, with a growing number of computational methods proposed yearly to study and simulate various aspects of macromolecular structure and dynamics. This review aims to provide an overview of recent advances, focusing primarily on methods proposed for exploring the structure space of macromolecules in isolation and in assemblies for the purpose of characterizing equilibrium structure and dynamics. In addition to surveying recent applications that showcase current capabilities of computational methods, this review highlights state-of-the-art algorithmic techniques proposed to overcome challenges posed in silico by the disparate spatial and time scales accessed by dynamic macromolecules. This review is not meant to be exhaustive, as such an endeavor is impossible, but rather aims to balance breadth and depth of strategies for modeling macromolecular structure and dynamics for a broad audience of novices and experts.

  8. Outrunning free radicals in room-temperature macromolecular crystallography

    International Nuclear Information System (INIS)

    Owen, Robin L.; Axford, Danny; Nettleship, Joanne E.; Owens, Raymond J.; Robinson, James I.; Morgan, Ann W.; Doré, Andrew S.; Lebon, Guillaume; Tate, Christopher G.; Fry, Elizabeth E.; Ren, Jingshan; Stuart, David I.; Evans, Gwyndaf

    2012-01-01

    A systematic increase in lifetime is observed in room-temperature protein and virus crystals through the use of reduced exposure times and a fast detector. A significant increase in the lifetime of room-temperature macromolecular crystals is reported through the use of a high-brilliance X-ray beam, reduced exposure times and a fast-readout detector. This is attributed to the ability to collect diffraction data before hydroxyl radicals can propagate through the crystal, fatally disrupting the lattice. Hydroxyl radicals are shown to be trapped in amorphous solutions at 100 K. The trend in crystal lifetime was observed in crystals of a soluble protein (immunoglobulin γ Fc receptor IIIa), a virus (bovine enterovirus serotype 2) and a membrane protein (human A 2A adenosine G-protein coupled receptor). The observation of a similar effect in all three systems provides clear evidence for a common optimal strategy for room-temperature data collection and will inform the design of future synchrotron beamlines and detectors for macromolecular crystallography

  9. Outrunning free radicals in room-temperature macromolecular crystallography

    Energy Technology Data Exchange (ETDEWEB)

    Owen, Robin L., E-mail: robin.owen@diamond.ac.uk; Axford, Danny [Diamond Light Source, Harwell Science and Innovation Campus, Didcot OX11 0DE (United Kingdom); Nettleship, Joanne E.; Owens, Raymond J. [Rutherford Appleton Laboratory, Didcot OX11 0FA (United Kingdom); The Henry Wellcome Building for Genomic Medicine, Roosevelt Drive, Oxford OX3 7BN (United Kingdom); Robinson, James I.; Morgan, Ann W. [University of Leeds, Leeds LS9 7FT (United Kingdom); Doré, Andrew S. [Heptares Therapeutics Ltd, BioPark, Welwyn Garden City AL7 3AX (United Kingdom); Lebon, Guillaume; Tate, Christopher G. [MRC Laboratory of Molecular Biology, Hills Road, Cambridge CB2 0QH (United Kingdom); Fry, Elizabeth E.; Ren, Jingshan [The Henry Wellcome Building for Genomic Medicine, Roosevelt Drive, Oxford OX3 7BN (United Kingdom); Stuart, David I. [Diamond Light Source, Harwell Science and Innovation Campus, Didcot OX11 0DE (United Kingdom); The Henry Wellcome Building for Genomic Medicine, Roosevelt Drive, Oxford OX3 7BN (United Kingdom); Evans, Gwyndaf [Diamond Light Source, Harwell Science and Innovation Campus, Didcot OX11 0DE (United Kingdom)

    2012-06-15

    A systematic increase in lifetime is observed in room-temperature protein and virus crystals through the use of reduced exposure times and a fast detector. A significant increase in the lifetime of room-temperature macromolecular crystals is reported through the use of a high-brilliance X-ray beam, reduced exposure times and a fast-readout detector. This is attributed to the ability to collect diffraction data before hydroxyl radicals can propagate through the crystal, fatally disrupting the lattice. Hydroxyl radicals are shown to be trapped in amorphous solutions at 100 K. The trend in crystal lifetime was observed in crystals of a soluble protein (immunoglobulin γ Fc receptor IIIa), a virus (bovine enterovirus serotype 2) and a membrane protein (human A{sub 2A} adenosine G-protein coupled receptor). The observation of a similar effect in all three systems provides clear evidence for a common optimal strategy for room-temperature data collection and will inform the design of future synchrotron beamlines and detectors for macromolecular crystallography.

  10. A smooth and differentiable bulk-solvent model for macromolecular diffraction

    Energy Technology Data Exchange (ETDEWEB)

    Fenn, T. D. [Department of Molecular and Cellular Physiology and Howard Hughes Medical Institute, Stanford, California (United States); Schnieders, M. J. [Department of Chemistry, Stanford, California (United States); Brunger, A. T., E-mail: brunger@stanford.edu [Department of Molecular and Cellular Physiology and Howard Hughes Medical Institute, Stanford, California (United States); Departments of Neurology and Neurological Sciences, Structural Biology and Photon Science, Stanford, California (United States)

    2010-09-01

    A new method for modeling the bulk solvent in macromolecular diffraction data based on Babinet’s principle is presented. The proposed models offer the advantage of differentiability with respect to atomic coordinates. Inclusion of low-resolution data in macromolecular crystallography requires a model for the bulk solvent. Previous methods have used a binary mask to accomplish this, which has proven to be very effective, but the mask is discontinuous at the solute–solvent boundary (i.e. the mask value jumps from zero to one) and is not differentiable with respect to atomic parameters. Here, two algorithms are introduced for computing bulk-solvent models using either a polynomial switch or a smoothly thresholded product of Gaussians, and both models are shown to be efficient and differentiable with respect to atomic coordinates. These alternative bulk-solvent models offer algorithmic improvements, while showing similar agreement of the model with the observed amplitudes relative to the binary model as monitored using R, R{sub free} and differences between experimental and model phases. As with the standard solvent models, the alternative models improve the agreement primarily with lower resolution (>6 Å) data versus no bulk solvent. The models are easily implemented into crystallographic software packages and can be used as a general method for bulk-solvent correction in macromolecular crystallography.

  11. A smooth and differentiable bulk-solvent model for macromolecular diffraction

    International Nuclear Information System (INIS)

    Fenn, T. D.; Schnieders, M. J.; Brunger, A. T.

    2010-01-01

    A new method for modeling the bulk solvent in macromolecular diffraction data based on Babinet’s principle is presented. The proposed models offer the advantage of differentiability with respect to atomic coordinates. Inclusion of low-resolution data in macromolecular crystallography requires a model for the bulk solvent. Previous methods have used a binary mask to accomplish this, which has proven to be very effective, but the mask is discontinuous at the solute–solvent boundary (i.e. the mask value jumps from zero to one) and is not differentiable with respect to atomic parameters. Here, two algorithms are introduced for computing bulk-solvent models using either a polynomial switch or a smoothly thresholded product of Gaussians, and both models are shown to be efficient and differentiable with respect to atomic coordinates. These alternative bulk-solvent models offer algorithmic improvements, while showing similar agreement of the model with the observed amplitudes relative to the binary model as monitored using R, R free and differences between experimental and model phases. As with the standard solvent models, the alternative models improve the agreement primarily with lower resolution (>6 Å) data versus no bulk solvent. The models are easily implemented into crystallographic software packages and can be used as a general method for bulk-solvent correction in macromolecular crystallography

  12. Trigger mechanism for the abrupt loss of energetic ions in magnetically confined plasmas.

    Science.gov (United States)

    Ida, K; Kobayashi, T; Yoshinuma, M; Akiyama, T; Tokuzawa, T; Tsuchiya, H; Itoh, K; Itoh, S-I

    2018-02-12

    Interaction between a quasi-stable stationary MHD mode and a tongue-shaped deformation is observed in the toroidal plasma with energetic particle driven MHD bursts. The quasi-stable stationary 1/1 MHD mode with interchange parity appears near the resonant rational surface of q = 1 between MHD bursts. The tongue-shaped deformation rapidly appears at the non-resonant non-rational surface as a localized large plasma displacement and then collapses (tongue event). It curbs the stationary 1/1 MHD mode and then triggers the collapse of energetic particle and magnetic field reconnection. The rotating 1/1 MHD mode with tearing parity at the q = 1 resonant surface, namely, the MHD burst, is excited after the tongue event.

  13. Oligo[methyl(phenyl)silane] ion-radical conformations calculated by the B3LYP method

    Czech Academy of Sciences Publication Activity Database

    Toman, Petr; Nešpůrek, Stanislav; Jang, J. W.; Lee, Ch. E.

    2005-01-01

    Roč. 101, č. 6 (2005), s. 746-752 ISSN 0020-7608 R&D Projects: GA ČR GP203/02/D074 Keywords : polysilane * ion-radical * density functional the ory Subject RIV: CD - Macromolecular Chemistry Impact factor: 1.192, year: 2005

  14. Energetic Systems

    Data.gov (United States)

    Federal Laboratory Consortium — The Energetic Systems Division provides full-spectrum energetic engineering services (project management, design, analysis, production support, in-service support,...

  15. Atomic Scale Structural Studies of Macromolecular Assemblies by Solid-state Nuclear Magnetic Resonance Spectroscopy.

    Science.gov (United States)

    Loquet, Antoine; Tolchard, James; Berbon, Melanie; Martinez, Denis; Habenstein, Birgit

    2017-09-17

    Supramolecular protein assemblies play fundamental roles in biological processes ranging from host-pathogen interaction, viral infection to the propagation of neurodegenerative disorders. Such assemblies consist in multiple protein subunits organized in a non-covalent way to form large macromolecular objects that can execute a variety of cellular functions or cause detrimental consequences. Atomic insights into the assembly mechanisms and the functioning of those macromolecular assemblies remain often scarce since their inherent insolubility and non-crystallinity often drastically reduces the quality of the data obtained from most techniques used in structural biology, such as X-ray crystallography and solution Nuclear Magnetic Resonance (NMR). We here present magic-angle spinning solid-state NMR spectroscopy (SSNMR) as a powerful method to investigate structures of macromolecular assemblies at atomic resolution. SSNMR can reveal atomic details on the assembled complex without size and solubility limitations. The protocol presented here describes the essential steps from the production of 13 C/ 15 N isotope-labeled macromolecular protein assemblies to the acquisition of standard SSNMR spectra and their analysis and interpretation. As an example, we show the pipeline of a SSNMR structural analysis of a filamentous protein assembly.

  16. A simple quantitative model of macromolecular crowding effects on protein folding: Application to the murine prion protein(121-231)

    Science.gov (United States)

    Bergasa-Caceres, Fernando; Rabitz, Herschel A.

    2013-06-01

    A model of protein folding kinetics is applied to study the effects of macromolecular crowding on protein folding rate and stability. Macromolecular crowding is found to promote a decrease of the entropic cost of folding of proteins that produces an increase of both the stability and the folding rate. The acceleration of the folding rate due to macromolecular crowding is shown to be a topology-dependent effect. The model is applied to the folding dynamics of the murine prion protein (121-231). The differential effect of macromolecular crowding as a function of protein topology suffices to make non-native configurations relatively more accessible.

  17. Pre-equilibrium decay processes in energetic heavy ion reactions

    International Nuclear Information System (INIS)

    Blann, M.

    1986-01-01

    The Boltzmann master equation (BME) is defined for application to precompound decay in heavy ion reactions in the 10 100 MeV/nucleon regime. Predicted neutron spectra are compared with measured results for central collisions of 20 Ne and 12 C with 165 Ho target nuclei. Comparisons are made with subthreshold π 0 yields in heavy ion reactions between 35 and 84 MeV/nucleon, and with the π 0 spectra. The BME is found to be an excellent tool for investigating these experimentally observed aspects of non-equilibrium heavy ion reactions. 18 refs., 8 figs

  18. Energetic Ion and Electron Irradiation of the Icy Galilean Satellites

    Science.gov (United States)

    Cooper, John F.; Johnson, Robert E.; Mauk, Barry H.; Garrett, Henry B.; Gehrels, Neil

    2001-01-01

    Galileo Orbiter measurements of energetic ions (20 keV to 100 MeV) and electrons (20-700 keV) in Jupiter's magnetosphere are used, in conjunction with the JPL electron model (less than 40 MeV), to compute irradiation effects in the surface layers of Europa, Ganymede, and Callisto. Significant elemental modifications are produced on unshielded surfaces to approximately centimeter depths in times of less than or equal to 10(exp 6) years, whereas micrometer depths on Europa are fully processed in approximately 10 years. Most observations of surface composition are limited to optical depths of approximately 1 mm, which are indirect contact with the space environment. Incident flux modeling includes Stormer deflection by the Ganymede dipole magnetic field, likely variable over that satellite's irradiation history. Delivered energy flux of approximately 8 x 10(exp 10) keV/square cm-s at Europa is comparable to total internal heat flux in the same units from tidal and radiogenic sources, while exceeding that for solar UV energies (greater than 6 eV) relevant to ice chemistry. Particle energy fluxes to Ganymede's equator and Callisto are similar at approximately 2-3 x 10(exp 8) keV/square cm-s with 5 x 10(exp 9) at Ganymede's polar cap, the latter being comparable to radiogenic energy input. Rates of change in optical reflectance and molecular composition on Europa, and on Ganymede's polar cap, are strongly driven by energy from irradiation, even in relatively young regions. Irradiation of nonice materials can produce SO2 and CO2, detected on Callisto and Europa, and simple to complex hydrocarbons. Iogenic neutral atoms and meteoroids deliver negligible energy approximately 10(exp 4-5) keV/square cm-s but impacts of the latter are important for burial or removal of irradiation products. Downward transport of radiation produced oxidants and hydrocarbons could deliver significant chemical energy into the satellite interiors for astrobiological evolution in putative sub

  19. Biofunctionalization of surfaces by energetic ion implantation: Review of progress on applications in implantable biomedical devices and antibody microarrays

    Science.gov (United States)

    Bilek, Marcela M. M.

    2014-08-01

    Despite major research efforts in the field of biomaterials, rejection, severe immune responses, scar tissue and poor integration continue to seriously limit the performance of today's implantable biomedical devices. Implantable biomaterials that interact with their host via an interfacial layer of active biomolecules to direct a desired cellular response to the implant would represent a major and much sought after improvement. Another, perhaps equally revolutionary, development that is on the biomedical horizon is the introduction of cost-effective microarrays for fast, highly multiplexed screening for biomarkers on cell membranes and in a variety of analyte solutions. Both of these advances will rely on effective methods of functionalizing surfaces with bioactive molecules. After a brief introduction to other methods currently available, this review will describe recently developed approaches that use energetic ions extracted from plasma to facilitate simple, one-step covalent surface immobilization of bioactive molecules. A kinetic theory model of the immobilization process by reactions with long-lived, mobile, surface-embedded radicals will be presented. The roles of surface chemistry and microstructure of the ion treated layer will be discussed. Early progress on applications of this technology to create diagnostic microarrays and to engineer bioactive surfaces for implantable biomedical devices will be reviewed.

  20. Plasma Interaction and Energetic Particle Dynamics near Callisto

    Science.gov (United States)

    Liuzzo, L.; Simon, S.; Feyerabend, M.; Motschmann, U. M.

    2017-12-01

    Callisto's magnetic environment is characterized by a complex admixture of induction signals from its conducting subsurface ocean, the interaction of corotating Jovian magnetospheric plasma with the moon's ionosphere and induced dipole, and the non-linear coupling between the effects. In contrast to other Galilean moons, ion gyroradii near Callisto are comparable to its size, requiring a kinetic treatment of the interaction region near the moon. Thus, we apply the hybrid simulation code AIKEF to constrain the competing effects of plasma interaction and induction. We determine their influence on the magnetic field signatures measured by Galileo during various Callisto flybys. We use the magnetic field calculated by the model to investigate energetic particle dynamics and their effect on Callisto's environment. From this, we provide a map of global energetic particle precipitation onto Callisto's surface, which may contribute to the generation of its atmosphere.

  1. Fe embedded in ice: The impacts of sublimation and energetic particle bombardment

    Science.gov (United States)

    Frankland, Victoria L.; Plane, John M. C.

    2015-05-01

    Icy particles containing a variety of Fe compounds are present in the upper atmospheres of planets such as the Earth and Saturn. In order to explore the role of ice sublimation and energetic ion bombardment in releasing Fe species into the gas phase, Fe-dosed ice films were prepared under UHV conditions in the laboratory. Temperature-programmed desorption studies of Fe/H2O films revealed that no Fe atoms or Fe-containing species co-desorbed along with the H2O molecules. This implies that when noctilucent ice cloud particles sublimate in the terrestrial mesosphere, the metallic species embedded in them will coalesce to form residual particles. Sputtering of the Fe-ice films by energetic Ar+ ions was shown to be an efficient mechanism for releasing Fe into the gas phase, with a yield of 0.08 (Ar+ energy=600 eV). Extrapolating with a semi-empirical sputtering model to the conditions of a proton aurora indicates that sputtering by energetic protons (>100 keV) should also be efficient. However, the proton flux in even an intense aurora will be too low for the resulting injection of Fe species into the gas phase to compete with that from meteoric ablation. In contrast, sputtering of the icy particles in the main rings of Saturn by energetic O+ ions may be the source of recently observed Fe+ in the Saturnian magnetosphere. Electron sputtering (9.5 keV) produced no detectable Fe atoms or Fe-containing species. Finally, it was observed that Fe(OH)2 was produced when Fe was dosed onto an ice film at 140 K (but not at 95 K). Electronic structure theory shows that the reaction which forms this hydroxide from adsorbed Fe has a large barrier of about 0.7 eV, from which we conclude that the reaction requires both translationally hot Fe atoms and mobile H2O molecules on the ice surface.

  2. Pulse radiolysis of water by energetic heavy ion

    International Nuclear Information System (INIS)

    Taguchi, M.; Sugo, Y.; Iwamatsu, K.; Yamaguchi, M.; Katsumura, Y.

    2011-01-01

    Complete text of publication follows. Water radiolysis is a fundamental process governing radiation effects in various aspects. Degree of water molecule decomposition depends on the type and LET (Linear Energy Transfer) value of radiations. However, the degradation of water molecules by α-particle has not been clearly understood. In this study, we aimed to clarify the reaction behavior of the groundwater induced by of α-particles from high-level radioactive waste (HLW) in the geological disposal environment. α-radiolysis of water was investigated by use of high energy helium ions accelerated by the AVF cyclotron in TIARA facility, JAEA/Takasaki. The pulsed He ion irradiation technique and online time resolved absorbance measurement system was investigated for direct observation of chemical reactions of transient species produced by irradiations. Hydroxyl (OH) radical is the most important species for reactions in aqueous samples because of its high reactivity and formation yield. NaCl was selected as a probe reagent for the OH radical produced by the irradiation with He ion, and dissolved in pure water. Because 50 MeV He ion has the penetration range at 1.5 mm in water, the sample cell has the thickness of 2 mm, and 50 μm glass windows on the top and bottom for preventing energy loss of the incident ions and measuring the absorbance. The transient absorbance was recorded for the aqueous NaCl solutions using semiconductor LASER diode at 375 nm as a probe light source. ClOH - was formed by the reaction of the OH radical with Cl - . The absorbance of ClOH - increased within the irradiation pulse width, and then decreased gradually. The formation yield of ClOH - which was estimated from the peak absorbance value, increased with the solute concentration. Precise analyses of chemical reactions occurred in track will be discussed at the presentation. This study is a part of the project on geological disposal funded by the Ministry of Economy, Trade and Industry, Japan

  3. A laser activated ion source

    International Nuclear Information System (INIS)

    Hughes, J.; Luther-Davies, B.; Hora, H.; Kelly, J.

    1978-01-01

    Apparatus for generating energetic ions of a target material from a cold plasma of the material is described. A pulsed laser beam is directed onto the target to produce the cold plasma. Laser beam pulses are short in relation to the collision time in the plasma. Non-linear elctrodynamic forces within the plasma act to accelerate and eject ions from the plasma. The apparatus can be used to separate ions of isotopes of an element

  4. Heterogeneous ion-exchange membranes based on sulfonated poly(1,4-phenylene sulfide)

    Czech Academy of Sciences Publication Activity Database

    Schauer, Jan; Kůdela, Vlastimil; Richau, K.; Mohr, R.

    2006-01-01

    Roč. 198, 1-3 (2006), s. 256-264 ISSN 0011-9164 R&D Projects: GA ČR GA203/05/0080 Institutional research plan: CEZ:AV0Z40500505 Keywords : poly(1,4-phenylene sulfide) sulfonated * ion-exchange membrane Subject RIV: CD - Macromolecular Chemistry Impact factor: 0.917, year: 2006

  5. The Postgraduate Study of Macromolecular Sciences at the University of Zagreb (1971-1980

    Directory of Open Access Journals (Sweden)

    Kunst, B.

    2008-07-01

    Full Text Available The postgraduate study of macromolecular sciences (PSMS was established at the University of Zagreb in 1971 as a university study in the time of expressed interdisciplinary permeation of natural sciences - physics, chemistry and biology, and application of their achievements in technologicaldisciplines. PSMS was established by a group of prominent university professors from the schools of Science, Chemical Technology, Pharmacy and Medicine, as well as from the Institute of Biology. The study comprised basic fields of macromolecular sciences: organic chemistry of synthetic macromolecules, physical chemistry of macromolecules, physics of macromolecules, biological macromolecules and polymer engineering with polymer application and processing, and teaching was performed in 29 lecture courses lead by 30 professors with their collaborators. PSMS ceased to exist with the change of legislation in Croatia in 1980, when the attitude prevailed to render back postgraduate studies to the university schools. During 9 years of existence of PSMS the MSci grade was awarded to 37 macromolecular experts. It was assessed that the PSMS some thirty years ago was an important example of modern postgraduate education as compared with the international postgraduate development. In concordance with the recent introduction of similar interdisciplinary studies in macromolecular sciences elsewhere in the world, the establishment of a modern interdisciplinary study in the field would be of importance for further development of these sciences in Croatia.

  6. Synthesis and characterization of macromolecular rhodamine tethers and their interactions with P-glycoprotein.

    Science.gov (United States)

    Crawford, Lindsey; Putnam, David

    2014-08-20

    Rhodamine dyes are well-known P-glycoprotein (P-gp) substrates that have played an important role in the detection of inhibitors and other substrates of P-gp, as well as in the understanding of P-gp function. Macromolecular conjugates of rhodamines could prove useful as tethers for further probing of P-gp structure and function. Two macromolecular derivatives of rhodamine, methoxypolyethylene glycol-rhodamine6G and methoxypolyethylene glycol-rhodamine123, were synthesized through the 2'-position of rhodamine6G and rhodamine123, thoroughly characterized, and then evaluated by inhibition with verapamil for their ability to interact with P-gp and to act as efflux substrates. To put the results into context, the P-gp interactions of the new conjugates were compared to the commercially available methoxypolyethylene glycol-rhodamineB. FACS analysis confirmed that macromolecular tethers of rhodamine6G, rhodamine123, and rhodamineB were accumulated in P-gp expressing cells 5.2 ± 0.3%, 26.2 ± 4%, and 64.2 ± 6%, respectively, compared to a sensitive cell line that does not overexpress P-gp. Along with confocal imaging, the efflux analysis confirmed that the macromolecular rhodamine tethers remain P-gp substrates. These results open potential avenues for new ways to probe the function of P-gp both in vitro and in vivo.

  7. Effect of field-aligned-beam in parallel diffusion of energetic particles in the Earth's foreshock

    Science.gov (United States)

    Matsukiyo, S.; Nakanishi, K.; Otsuka, F.; Kis, A.; Lemperger, I.; Hada, T.

    2016-12-01

    Diffusive shock acceleration (DSA) is one of the plausible acceleration mechanisms of cosmic rays. In the standard DSA model the partial density of the accelerated particles, diffused into upstream, exponentially decreases as the distance to the shock increases. Kis et al. (GRL, 31, L20801, 2004) examined the density gradients of energetic ions upstream of the bow shock with high accuracy by using Cluster data. They estimated the diffusion coefficients of energetic ions for the event in February 18, 2003 and showed that the obtained diffusion coefficients are significantly smaller than those estimated in the past statistical study. This implies that particle acceleration at the bow shock can be more efficient than considered before. Here, we focus on the effect of the field-aligned-beam (FAB) which is often observed in the foreshock, and examine how the FAB affects the efficiency of diffusion of the energetic ions by performing test particle simulations. The upstream turbulence is given by the superposition of parallel Alfven waves with power-law energy spectrum with random phase approximation. In the spectrum we further add a peak corresponding to the waves resonantly generated by the FAB. The dependence of the diffusion coefficient on the presence of the FAB as well as total energy of the turbulence, power-law index of the turbulence, and intensity of FAB oriented waves are discussed.

  8. Properties and origin of energetic particles at the duskside of the Earth's magnetosheath throughout a great storm

    Directory of Open Access Journals (Sweden)

    D. V. Sarafopoulos

    Full Text Available We study an interval of 56 h on January 16 to 18, 1995, during which the GEOTAIL spacecraft traversed the duskside magnetosheath from 
    X @ -15 to -40 RE and the EPIC/ICS and EPIC/STICS sensors sporadically detected tens of energetic particle bursts. This interval coincides with the expansion and growth of a great geomagnetic storm. The flux bursts are strongly dependent on the magnetic field orientation. They switch on whenever the Bz component approaches zero (Bz @ 0 nT. We strongly suggest a magnetospheric origin for the energetic ions and electrons streaming along these "exodus channels". The time profiles for energetic protons and "tracer" O+ ions are nearly identical, which suggests a common source. We suggest that the particles leak out of the magnetosphere all the time and that when the magnetosheath magnetic field connects the spacecraft to the magnetotail, they stream away to be observed by the GEOTAIL sensors. The energetic electron fluxes are not observed as commonly as the ions, indicating that their source is more limited in extent. In one case study the magnetosheath magnetic field lines are draped around the magnetopause within the YZ plane and a dispersed structure for peak fluxes of different species is detected and interpreted as evidence for energetic electrons leaking out from the dawn LLBL and then being channelled along the draped magnetic field lines over the magnetopause. Protons leak from the equatorial dusk LLBL and this spatial differentiation between electron and proton sources results in the observed dispersion. A gradient of energetic proton intensities toward the ZGSM = 0 plane is inferred. There is a permanent layer of energetic particles adjacent to the magnetosheath during this interval in which the dominant component of the magnetic field was

  9. Measurement of visible and UV emission from Energetic Neutral Atom Precipitation (ENAP), on Spacelab

    Science.gov (United States)

    Tinsley, B. A.

    1980-01-01

    The charge exchange of plasmaspheric ions and exospheric H and O and of solar wind ions with exospheric and interplanetary H are sources of precipitating neutrals whose faint emission may be observed by the imaging spectrometric observatory during dark periods of the SL-1 orbit. Measurements of the interactions of these precipitating atoms with the thermosphere are needed to evaluate the heating and ionization effects on the atmosphere as well as the selective loss of i energetic ions from the sources (predominantly the ring current).

  10. Impact of energetic cosmic-ray ions on astrophysical ice grains

    International Nuclear Information System (INIS)

    Mainitz, Martin; Anders, Christian; Urbassek, Herbert M.

    2017-01-01

    Highlights: • We use the REAX potential to model dissociations and reactions. • An ice grain consisting of a mixture of small molecules is considered. • The passage of a cosmic-ray ion initiates an ion track. • The track induces a shock wave and disintegrates the grain. • Abundant fragments and reaction products are detected. - Abstract: Using molecular-dynamics simulation with REAX potentials, we study the consequences of cosmic-ray ion impact on ice grains. The grains are composed of a mixture of H_2O, CO_2, NH_3, and CH_3OH molecules. Due to the high energy deposition of the cosmic-ray ion, 5 keV/nm, a strong pressure wave runs through the grain, while the interior of the ion track gasifies. Abundant molecular dissociations occur; reactions of the fragments form a variety of novel molecular product species.

  11. The measurements of light high-energy ions in NINA-2 experiment

    Directory of Open Access Journals (Sweden)

    A. Leonov

    2007-10-01

    Full Text Available The flux of energetic light ions at low altitude is both an important input and output for self-consistent calculations of albedo particles resulting from the interaction of trapped and cosmic ray particles, with the upper atmosphere. In addition, data on the flux of light ions are needed to evaluate radiation damages on space-borne instruments and on space mission crews. In spite of that, sources of data on the flux of energetic ions at LEO are roughly limited to the AP-8 model, CREME/CREME96 codes and the SAMPEX, NOAA/TIROS satellites. The existing and operational European SAC-C/ICARE and PROBA-1/SREM instruments could also be potential sources for proton data at LEO. Although AP-8 and SAMPEX/PSB97 may be publicly accessed through the SPENVIS, they exhibit an order of magnitude difference in low altitude proton fluxes and they do not contain helium fluxes. Therefore, improved light ion radiation models are still needed.

    In this paper we present a procedure to identify and measure the energy of ions that are not stopped in the NINA-2 instrument. Moreover, problems related to particles that cross the instrument in the opposite direction are addressed and shown to be a possible cause of particle misidentification. Measuring fluxes of low abundance elements like energetic helium ions requires a good characterisation of all possible sources of backgrounds in the detector. Hints to determine the several contributions to the background are presented herein and may be applied to extract an order of magnitude of energetic ions fluxes from existing data sets, while waiting for dedicated high performance instruments.

  12. The measurements of light high-energy ions in NINA-2 experiment

    Directory of Open Access Journals (Sweden)

    A. Leonov

    2007-10-01

    Full Text Available The flux of energetic light ions at low altitude is both an important input and output for self-consistent calculations of albedo particles resulting from the interaction of trapped and cosmic ray particles, with the upper atmosphere. In addition, data on the flux of light ions are needed to evaluate radiation damages on space-borne instruments and on space mission crews. In spite of that, sources of data on the flux of energetic ions at LEO are roughly limited to the AP-8 model, CREME/CREME96 codes and the SAMPEX, NOAA/TIROS satellites. The existing and operational European SAC-C/ICARE and PROBA-1/SREM instruments could also be potential sources for proton data at LEO. Although AP-8 and SAMPEX/PSB97 may be publicly accessed through the SPENVIS, they exhibit an order of magnitude difference in low altitude proton fluxes and they do not contain helium fluxes. Therefore, improved light ion radiation models are still needed. In this paper we present a procedure to identify and measure the energy of ions that are not stopped in the NINA-2 instrument. Moreover, problems related to particles that cross the instrument in the opposite direction are addressed and shown to be a possible cause of particle misidentification. Measuring fluxes of low abundance elements like energetic helium ions requires a good characterisation of all possible sources of backgrounds in the detector. Hints to determine the several contributions to the background are presented herein and may be applied to extract an order of magnitude of energetic ions fluxes from existing data sets, while waiting for dedicated high performance instruments.

  13. Ion spectral structures observed by the Van Allen Probes

    Science.gov (United States)

    Ferradas, C.; Zhang, J.; Spence, H. E.; Kistler, L. M.; Larsen, B.; Reeves, G. D.; Skoug, R. M.; Funsten, H. O.

    2015-12-01

    During the last decades several missions have recorded the presence of dynamic spectral features of energetic ions in the inner magnetosphere. Previous studies have reported single "nose-like" structures occurring alone and simultaneous nose-like structures (up to three). These ion structures are named after the characteristic shapes of energy bands or gaps in the energy-time spectrograms of in situ measured ion fluxes. They constitute the observational signatures of ion acceleration, transport, and loss in the global magnetosphere. The HOPE mass spectrometer onboard the Van Allen Probes measures energetic hydrogen, helium, and oxygen ions near the inner edge of the plasma sheet, where these ion structures are observed. We present a statistical study of nose-like structures, using 2-years measurements from the HOPE instrument. The results provide important details about the spatial distribution (dependence on geocentric distance), spectral features of the structures (differences among species), and geomagnetic conditions under which these structures occur.

  14. Study of energetic-particle-irradiation induced biological effect on Rhizopus oryzae through synchrotron-FTIR micro-spectroscopy

    Science.gov (United States)

    Liu, Jinghua; Qi, Zeming; Huang, Qing; Wei, Xiaoli; Ke, Zhigang; Fang, Yusheng; Tian, Yangchao; Yu, Zengliang

    2013-01-01

    Energetic particles exist ubiquitously and cause varied biological effects such as DNA strand breaks, lipid peroxidation, protein modification, cell apoptosis or death. An emerging biotechnology based on ion-beam technique has been developed to serve as an effective tool for mutation breeding of crops and microbes. In order to improve the effectiveness of ion-beam biotechnology for mutation breeding, it is indispensible to gain a better understanding of the mechanism of the interactions between the energetic ions and biological systems which is still elusive. A new trend is to conduct more comprehensive research which is based on micro-scaled observation of the changes of the cellular structures and compositions under the interactions. For this purpose, advanced synchrotron FTIR (s-FTIR) microscopy was employed to monitor the cellular changes of single fungal hyphae under irradiation of α-particles from 241Am. Intracellular contents of ROS, MDA, GSSG/GSH and activities of CAT and SOD were measured via biochemical assay. Ion-irradiation on Rhizopus oryzae causes localized vacuolation, autolysis of cell wall and membrane, lipid peroxidation, DNA damage and conformational changes of proteins, which have been clearly revealed by the s-FTIR microspectroscopy. The different changes of cell viability, SOD and CAT activities can be explained by the ROS-involved chemical reactions. Evidently, the elevated level of ROS in hyphal cells upon irradiation plays the key role in the caused biological effect. This study demonstrates that s-FTIR microspectroscopy is an effective tool to study the damage of fungal hyphae caused by ionizing radiation and it facilitates the exploit of the mechanism for the interactions between the energetic ions and biological systems.

  15. Sputtering of nano-grains by energetic ions

    CERN Document Server

    Bringa, E M

    2002-01-01

    Sputtering from grains with a size of tens of nanometers is important in a number of astrophysical environments having a variety of plasma properties and can have applications in nano-technology. Since energy deposition by incident ions or electrons can create 'hot' regions in a small grain, thermal spike (TS) models have been applied to estimate the sputtering. The excitations produced by a fast ion are often assumed to form a 'hot' cylindrical track. In this paper we use molecular dynamics (MD) calculations to describe the energy transport and sputtering due to the creation of a 'hot' track in a grain with one quarter million atoms. We show the enhancement due to grain size and find that TS models work over a limited range of excitation densities. Discrepancies of several orders of magnitude are found when comparing our MD results for sputtering of small dust grains to those obtained by the astrophysical community using spike models.

  16. Differential charge-transfer cross sections for systems with energetically degenerate or near-degenerate channels

    International Nuclear Information System (INIS)

    Nguyen, H.; Bredy, R.; Camp, H.A.; DePaola, B.D.; Awata, T.

    2004-01-01

    Resolution plays a vital role in spectroscopic studies. In the usual recoil-ion momentum spectroscopy (RIMS), Q-value resolution is relied upon to distinguish between different collision channels: The better the Q-value resolution, the better one is able to resolve energetically similar channels. Although traditional COLTRIMS greatly improves Q-value resolution by cooling the target and thus greatly reducing the initial target momentum spread, the resolution of the technique is still limited by target temperature. However, with the recent development in RIMS, namely, magneto-optical trap recoil ion momentum spectroscopy (MOTRIMS) superior recoil ion momentum resolution as well as charge transfer measurements with laser excited targets have become possible. Through MOTRIMS, methods for the measurements of target excited state fraction and kinematically complete relative charge transfer cross sections have been developed, even for some systems having energetically degenerate or nearly degenerate channels. In the present work, the systems of interest having energy degeneracies or near degeneracies are Rb + , K + , and Li + colliding with trapped Rb(5l), where l=s and p

  17. Modification of thin film properties by ion bombardment during deposition

    International Nuclear Information System (INIS)

    Harper, J.M.E.; Cuomo, J.J.; Gambino, R.J.; Kaufman, H.R.

    1984-01-01

    Many thin film deposition techniques involve some form of energetic particle bombardment of the growing film. The degree of bombardment greatly influences the film composition, structure and other properties. While in some techniques the degree of bombardment is secondary to the original process design, in recent years more deposition systems are being designed with the capability for controlled ion bombardment of thin films during deposition. The highest degree of control is obtained with ion beam sources which operate independently of the vapor source providing the thin film material. Other plasma techniques offer varying degrees of control of energetic particle bombardment. Deposition methods involving ion bombardment are described, and the basic processes with which film properties are modified by ion bombardment are summarized. (Auth.)

  18. Impact of energetic cosmic-ray ions on astrophysical ice grains

    Energy Technology Data Exchange (ETDEWEB)

    Mainitz, Martin; Anders, Christian; Urbassek, Herbert M., E-mail: urbassek@rhrk.uni-kl.de

    2017-02-15

    Highlights: • We use the REAX potential to model dissociations and reactions. • An ice grain consisting of a mixture of small molecules is considered. • The passage of a cosmic-ray ion initiates an ion track. • The track induces a shock wave and disintegrates the grain. • Abundant fragments and reaction products are detected. - Abstract: Using molecular-dynamics simulation with REAX potentials, we study the consequences of cosmic-ray ion impact on ice grains. The grains are composed of a mixture of H{sub 2}O, CO{sub 2}, NH{sub 3}, and CH{sub 3}OH molecules. Due to the high energy deposition of the cosmic-ray ion, 5 keV/nm, a strong pressure wave runs through the grain, while the interior of the ion track gasifies. Abundant molecular dissociations occur; reactions of the fragments form a variety of novel molecular product species.

  19. MMTF-An efficient file format for the transmission, visualization, and analysis of macromolecular structures.

    Directory of Open Access Journals (Sweden)

    Anthony R Bradley

    2017-06-01

    Full Text Available Recent advances in experimental techniques have led to a rapid growth in complexity, size, and number of macromolecular structures that are made available through the Protein Data Bank. This creates a challenge for macromolecular visualization and analysis. Macromolecular structure files, such as PDB or PDBx/mmCIF files can be slow to transfer, parse, and hard to incorporate into third-party software tools. Here, we present a new binary and compressed data representation, the MacroMolecular Transmission Format, MMTF, as well as software implementations in several languages that have been developed around it, which address these issues. We describe the new format and its APIs and demonstrate that it is several times faster to parse, and about a quarter of the file size of the current standard format, PDBx/mmCIF. As a consequence of the new data representation, it is now possible to visualize structures with millions of atoms in a web browser, keep the whole PDB archive in memory or parse it within few minutes on average computers, which opens up a new way of thinking how to design and implement efficient algorithms in structural bioinformatics. The PDB archive is available in MMTF file format through web services and data that are updated on a weekly basis.

  20. Diffusion accessibility as a method for visualizing macromolecular surface geometry.

    Science.gov (United States)

    Tsai, Yingssu; Holton, Thomas; Yeates, Todd O

    2015-10-01

    Important three-dimensional spatial features such as depth and surface concavity can be difficult to convey clearly in the context of two-dimensional images. In the area of macromolecular visualization, the computer graphics technique of ray-tracing can be helpful, but further techniques for emphasizing surface concavity can give clearer perceptions of depth. The notion of diffusion accessibility is well-suited for emphasizing such features of macromolecular surfaces, but a method for calculating diffusion accessibility has not been made widely available. Here we make available a web-based platform that performs the necessary calculation by solving the Laplace equation for steady state diffusion, and produces scripts for visualization that emphasize surface depth by coloring according to diffusion accessibility. The URL is http://services.mbi.ucla.edu/DiffAcc/. © 2015 The Protein Society.

  1. Local analysis of strains and rotations for macromolecular electron microscopy maps

    Energy Technology Data Exchange (ETDEWEB)

    Martin-Ramos, A.; Prieto, F.; Melero, R.; Martin-Benito, J.; Jonic, S.; Navas-Calvente, J.; Vargas, J.; Oton, J.; Abrishami, V.; Rosa-Trevin, J.L. de la; Gomez-Blanco, J.; Vilas, J.L.; Marabini, R.; Carazo, R.; Sorzano, C.O.S.

    2016-07-01

    Macromolecular complexes can be considered as molecular nano-machines that must have mobile parts in order to perform their physiological functions. The reordering of their parts is essential to execute their task. These rearrangements induce local strains and rotations which, after analyzing them, may provide relevant information about how the proteins perform their function. In this project these deformations of the macromolecular complexes are characterized, translating into a “mathematical language” the conformational changes of the complexes when they perform their function. Electron Microscopy (EM) volumes are analyzed using a method that uses B-splines as its basis functions. It is shown that the results obtained are consistent with the conformational changes described in their corresponding reference publications. (Author)

  2. Mapping and uncertainty analysis of energy and pitch angle phase space in the DIII-D fast ion loss detector

    Energy Technology Data Exchange (ETDEWEB)

    Pace, D. C., E-mail: pacedc@fusion.gat.com; Fisher, R. K.; Van Zeeland, M. A. [General Atomics, PO Box 85608, San Diego, California 92186-5608 (United States); Pipes, R. [Department of Physics, University of Hawaii, Hilo, Hawaii 96720-4091 (United States)

    2014-11-15

    New phase space mapping and uncertainty analysis of energetic ion loss data in the DIII-D tokamak provides experimental results that serve as valuable constraints in first-principles simulations of energetic ion transport. Beam ion losses are measured by the fast ion loss detector (FILD) diagnostic system consisting of two magnetic spectrometers placed independently along the outer wall. Monte Carlo simulations of mono-energetic and single-pitch ions reaching the FILDs are used to determine the expected uncertainty in the measurements. Modeling shows that the variation in gyrophase of 80 keV beam ions at the FILD aperture can produce an apparent measured energy signature spanning across 50-140 keV. These calculations compare favorably with experiments in which neutral beam prompt loss provides a well known energy and pitch distribution.

  3. Mapping and uncertainty analysis of energy and pitch angle phase space in the DIII-D fast ion loss detector.

    Science.gov (United States)

    Pace, D C; Pipes, R; Fisher, R K; Van Zeeland, M A

    2014-11-01

    New phase space mapping and uncertainty analysis of energetic ion loss data in the DIII-D tokamak provides experimental results that serve as valuable constraints in first-principles simulations of energetic ion transport. Beam ion losses are measured by the fast ion loss detector (FILD) diagnostic system consisting of two magnetic spectrometers placed independently along the outer wall. Monte Carlo simulations of mono-energetic and single-pitch ions reaching the FILDs are used to determine the expected uncertainty in the measurements. Modeling shows that the variation in gyrophase of 80 keV beam ions at the FILD aperture can produce an apparent measured energy signature spanning across 50-140 keV. These calculations compare favorably with experiments in which neutral beam prompt loss provides a well known energy and pitch distribution.

  4. [Macromolecular aromatic network characteristics of Chinese power coal analyzed by synchronous fluorescence and X-ray diffraction].

    Science.gov (United States)

    Ye, Cui-Ping; Feng, Jie; Li, Wen-Ying

    2012-07-01

    Coal structure, especially the macromolecular aromatic skeleton structure, has a strong influence on coke reactivity and coal gasification, so it is the key to grasp the macromolecular aromatic skeleton coal structure for getting the reasonable high efficiency utilization of coal. However, it is difficult to acquire their information due to the complex compositions and structure of coal. It has been found that the macromolecular aromatic network coal structure would be most isolated if small molecular of coal was first extracted. Then the macromolecular aromatic skeleton coal structure would be clearly analyzed by instruments, such as X-ray diffraction (XRD), fluorescence spectroscopy with synchronous mode (Syn-F), Gel permeation chromatography (GPC) etc. Based on the previous results, according to the stepwise fractional liquid extraction, two Chinese typical power coals, PS and HDG, were extracted by silica gel as stationary phase and acetonitrile, tetrahydrofuran (THF), pyridine and 1-methyl-2-pyrollidinone (NMP) as a solvent group for sequential elution. GPC, Syn-F and XRD were applied to investigate molecular mass distribution, condensed aromatic structure and crystal characteristics. The results showed that the size of aromatic layers (La) is small (3-3.95 nm) and the stacking heights (Lc) are 0.8-1.2 nm. The molecular mass distribution of the macromolecular aromatic network structure is between 400 and 1 130 amu, with condensed aromatic numbers of 3-7 in the structure units.

  5. Measurement of plasma and energetic charged particles in the proximity of Halley's comet

    International Nuclear Information System (INIS)

    Erdoes, Geza; Gombosi, Tamas; Kecskemety, Karoly; Somogyi, Antal; Tatrallyay, Mariella; Varga, Andras

    1987-01-01

    The instrumentation aboard the space probe VEGA for the exploration of Halley's comet contained the particle analyzers PLAZMAG and TUENDE-M. PLAZMAG was used for the measurement of the interaction between the low-energy solar plasma and the heavy ions from the comet. From the energy spectra measured near the nucleus of the comet the density distribution of ion groups can also be determined. TUENDE-M recorded the distribution of energetic heavy ions from the comet. The properties of various plasma regions within the 10 million km range from the comet's nucleus are discussed in detail. (R.P.)

  6. Helium Energetic Neutral Atoms from the Heliosphere: Perspectives for Future Observations

    Energy Technology Data Exchange (ETDEWEB)

    Swaczyna, Paweł; Grzedzielski, Stan; Bzowski, Maciej, E-mail: pswaczyna@cbk.waw.pl [Space Research Centre of the Polish Academy of Sciences (CBK PAN), Bartycka 18A, 00-716 Warsaw (Poland)

    2017-05-10

    Observations of energetic neutral atoms (ENAs) allow for remote sensing of plasma properties in distant regions of the heliosphere. So far, most of the observations have concerned only hydrogen atoms. In this paper, we present perspectives for observations of helium energetic neutral atoms (He ENAs). We calculated the expected intensities of He ENAs created by the neutralization of helium ions in the inner heliosheath and through the secondary ENA mechanism in the outer heliosheath. We found that the dominant source region for He ENAs is the inner heliosheath. The obtained magnitudes of intensity spectra suggest that He ENAs can be observed with future ENA detectors, as those planned on Interstellar Mapping and Acceleration Probe . Observing He ENAs is most likely for energies from a few to a few tens of keV/nuc. Estimates of the expected count rates show that the ratio of helium to hydrogen atoms registered in the detectors can be as low as 1:10{sup 4}. Consequently, the detectors need to be equipped with an appropriate mass spectrometer capability, allowing for recognition of chemical elements. Due to the long mean free paths of helium ions in the inner heliosheath, He ENAs are produced also in the distant heliospheric tail. This implies that observations of He ENAs can resolve its structure, which seems challenging from observations of hydrogen ENAs since energetic protons are neutralized before they progress deeper in the heliospheric tail.

  7. Energetics of magnesium, strontium, and barium doped lanthanum gallate perovskites

    International Nuclear Information System (INIS)

    Cheng Jihong; Navrotsky, Alexandra

    2004-01-01

    LaGaO 3 perovskites doped with Sr or Ba at the La site and Mg at the Ga site were prepared by solid-state reaction or sol-gel method and characterized. Enthalpies of formation from constituent oxides at 298 K were determined by high-temperature oxide melt solution calorimetry. Energetic trends are discussed in terms of defect chemistry. As oxygen deficiency increases, formation enthalpies define three trends, LaGa 1-y Mg y O 3-δ (LGM), La 1-x Sr x Ga 1-y Mg y O 3-δ (LSGM), and La 1-x Ba x Ga 1-y Mg y O 3-δ (LBGM). They become less exothermic with increasing doping, suggesting a dominant destabilization effect from oxygen vacancies. The endothermic enthalpy of vacancy formation is 275±37, 166±18 and 138±12 kJ/mol of V O ·· for LGM, LBGM and LSGM, respectively. Tolerance factor and ion size mismatch also affect enthalpies. In terms of energetics, Sr is the best dopant for the La site and Mg for the Ga site, supporting earlier studies, including oxygen ion conductivity and computer modeling

  8. Energetics of magnesium, strontium, and barium doped lanthanum gallate perovskites

    Science.gov (United States)

    Cheng, Jihong; Navrotsky, Alexandra

    2004-01-01

    LaGaO 3 perovskites doped with Sr or Ba at the La site and Mg at the Ga site were prepared by solid-state reaction or sol-gel method and characterized. Enthalpies of formation from constituent oxides at 298 K were determined by high-temperature oxide melt solution calorimetry. Energetic trends are discussed in terms of defect chemistry. As oxygen deficiency increases, formation enthalpies define three trends, LaGa 1- yMg yO 3- δ (LGM), La 1- xSr xGa 1- yMg yO 3- δ (LSGM), and La 1- xBa xGa 1- yMg yO 3- δ (LBGM). They become less exothermic with increasing doping, suggesting a dominant destabilization effect from oxygen vacancies. The endothermic enthalpy of vacancy formation is 275±37, 166±18 and 138±12 kJ/mol of VO·· for LGM, LBGM and LSGM, respectively. Tolerance factor and ion size mismatch also affect enthalpies. In terms of energetics, Sr is the best dopant for the La site and Mg for the Ga site, supporting earlier studies, including oxygen ion conductivity and computer modeling.

  9. High-energy elastic recoil detection heavy ions for light element analysis

    International Nuclear Information System (INIS)

    Goppelt-Langer, P.; Yamamoto, S.; Takeshita, H.; Aoki, Y.; Naramoto, H.

    1994-01-01

    The detection of light and medium heavy elements in not homogeneous solids is a severe problem in ion beam analysis. Heavy elements can be detected by the well established Rutherford backscattering technique (RBS). In a homogeneous host material most impurities can be easily analyzed by secondary ion mass spectroscopy (SIMS). Some isotopes ( 3 He, 6 Li, 10 B) can be measured by nuclear reaction analysis (NRA) using thermal neutrons inducing (n, p) or (n, α) reactions. Others can be detected by energetic ion beams by nuclear reactions (e.g. 15 N( 1 H, αγ) 12 C for analysis of hydrogen). A high content of H, D or T can be also determined by elastic recoil detection using an energetic He beam. The latter technique has been developed to a universal method for detection of light and heavy elements in any target, using a high energetic heavy ion beam and a detector system, which is able to identify the recoils and delivers energy and position of the particles. (author)

  10. IN MEMORIAM ION VATAMANU

    Directory of Open Access Journals (Sweden)

    S.P. Palii

    2012-12-01

    Full Text Available A dreamer in his creative solitude, an objective and lucid analyst of history and contemporaneity, an energetic and decisive leader with an uncanny ability for crisis management – all these describe Ion Vatamanu. His wife Elena and daughters Mihaela, Mariana, Leontina treasure a personal universe in which the magical spark of Ion Vatamanu’s love and joy of life meld the everyday in and out of poetry. Ion Vatamanu’s instantaneous connection to the audiences and deeply felt words still touch the hearts of his many colleagues and friends. Downloads: 2

  11. Atypical energetic particle events observed prior energetic particle enhancements associated with corotating interaction regions

    Science.gov (United States)

    Khabarova, Olga; Malandraki, Olga; Zank, Gary; Jackson, Bernard; Bisi, Mario; Desai, Mihir; Li, Gang; le Roux, Jakobus; Yu, Hsiu-Shan

    2017-04-01

    Recent studies of mechanisms of particle acceleration in the heliosphere have revealed the importance of the comprehensive analysis of stream-stream interactions as well as the heliospheric current sheet (HCS) - stream interactions that often occur in the solar wind, producing huge magnetic cavities bounded by strong current sheets. Such cavities are usually filled with small-scale magnetic islands that trap and re-accelerate energetic particles (Zank et al. ApJ, 2014, 2015; le Roux et al. ApJ, 2015, 2016; Khabarova et al. ApJ, 2015, 2016). Crossings of these regions are associated with unusual variations in the energetic particle flux up to several MeV/nuc near the Earth's orbit. These energetic particle flux enhancements called "atypical energetic particle events" (AEPEs) are not associated with standard mechanisms of particle acceleration. The analysis of multi-spacecraft measurements of energetic particle flux, plasma and the interplanetary magnetic field shows that AEPEs have a local origin as they are observed by different spacecraft with a time delay corresponding to the solar wind propagation from one spacecraft to another, which is a signature of local particle acceleration in the region embedded in expanding and rotating background solar wind. AEPEs are often observed before the arrival of corotating interaction regions (CIRs) or stream interaction regions (SIRs) to the Earth's orbit. When fast solar wind streams catch up with slow solar wind, SIRs of compressed heated plasma or more regular CIRs are created at the leading edge of the high-speed stream. Since coronal holes are often long-lived structures, the same CIR re-appears often for several consecutive solar rotations. At low heliographic latitudes, such CIRs are typically bounded by forward and reverse waves on their leading and trailing edges, respectively, that steepen into shocks at heliocentric distances beyond 1 AU. Energetic ion increases have been frequently observed in association with CIR

  12. Flexibility damps macromolecular crowding effects on protein folding dynamics: Application to the murine prion protein (121-231)

    Science.gov (United States)

    Bergasa-Caceres, Fernando; Rabitz, Herschel A.

    2014-01-01

    A model of protein folding kinetics is applied to study the combined effects of protein flexibility and macromolecular crowding on protein folding rate and stability. It is found that the increase in stability and folding rate promoted by macromolecular crowding is damped for proteins with highly flexible native structures. The model is applied to the folding dynamics of the murine prion protein (121-231). It is found that the high flexibility of the native isoform of the murine prion protein (121-231) reduces the effects of macromolecular crowding on its folding dynamics. The relevance of these findings for the pathogenic mechanism are discussed.

  13. Low Altitude Emission (LAE) of Energetic Neutral Atoms (ENA) Observed by TWINS and its Relation to the CINEMA CubeSat Mission

    Science.gov (United States)

    Bazell, D.; Sotirelis, T.; Nair, H.; Roelof, E. C.; Brandt, P. C.

    2009-12-01

    The brightest source of energetic neutral atoms (ENAs) at energies >1keV is low altitude emission (LAE) from ~200-400km near auroral latitudes where precipitating energetic ions undergo multiple atomic collisions with the monatomic (O) exosphere. This emission is many times brighter than that from the high-altitude ring current region where the energetic ions interact only weakly with the much less dense monatomic (H) hydrogen geocorona. The recently selected NSF CubeSat mission CINEMA [Lin et al., this special session] has, as part of its science payload (STEIN), an ENA imager covering energies 4-100keV. From a high-inclination ~800km orbit, STEIN will view the LAE four times during every 90 minutes. The NASA TWINS stereo ENA imagers (2-40keV) will also view the LAE from their Molniya orbits (apogee radius~7Re). We have been analyzing the TWINS ENA images of LAE and comparing them with in situ ion measurements (1-40keV) from DMSP spacecraft when their tracks take them under the ion precipitation regions imaged by TWINS. We have developed an ENA emissivity function that relates the directionally-dependent emergent ENA spectrum to that of the precipitating ions. The TWINS/DMSP direct comparisons show good agreement. We offer suggestions on joint observing strategies for CINEMA, TWINS and DMSP after the CINEMA launch in the second half of 2011.

  14. Measurements and modelling of fast-ion redistribution due to resonant MHD instabilities in MAST

    International Nuclear Information System (INIS)

    Jones, O M; Cecconello, M; Klimek, I; McClements, K G; Akers, R J; Keeling, D L; Meakins, A J; Sharapov, S E; Boeglin, W U; Perez, R V; Turnyanskiy, M

    2015-01-01

    The results of a comprehensive investigation into the effects of toroidicity-induced Alfvén eigenmodes (TAE) and energetic particle modes on the NBI-generated fast-ion population in MAST plasmas are reported. Fast-ion redistribution due to frequency-chirping TAE in the range 50 kHz–100 kHz and frequency-chirping energetic particle modes known as fishbones in the range 20 kHz–50 kHz, is observed. TAE and fishbones are also observed to cause losses of fast ions from the plasma. The spatial and temporal evolution of the fast-ion distribution is determined using a fission chamber, a radially-scanning collimated neutron flux monitor, a fast-ion deuterium alpha spectrometer and a charged fusion product detector. Modelling using the global transport analysis code Transp, with ad hoc anomalous diffusion and fishbone loss models introduced, reproduces the coarsest features of the affected fast-ion distribution in the presence of energetic particle-driven modes. The spectrally and spatially resolved measurements show, however, that these models do not fully capture the effects of chirping modes on the fast-ion distribution. (paper)

  15. Kinetic modeling of auroral ion outflows observed by the VISIONS sounding rocket

    Science.gov (United States)

    Albarran, R. M.; Zettergren, M. D.

    2017-12-01

    The VISIONS (VISualizing Ion Outflow via Neutral atom imaging during a Substorm) sounding rocket was launched on Feb. 7, 2013 at 8:21 UTC from Poker Flat, Alaska, into an auroral substorm with the objective of identifying the drivers and dynamics of the ion outflow below 1000km. Energetic ion data from the VISIONS polar cap boundary crossing show evidence of an ion "pressure cooker" effect whereby ions energized via transverse heating in the topside ionosphere travel upward and are impeded by a parallel potential structure at higher altitudes. VISIONS was also instrumented with an energetic neutral atom (ENA) detector which measured neutral particles ( 50-100 eV energy) presumably produced by charge-exchange with the energized outflowing ions. Hence, inferences about ion outflow may be made via remotely-sensing measurements of ENAs. This investigation focuses on modeling energetic outflowing ion distributions observed by VISIONS using a kinetic model. This kinetic model traces large numbers of individual particles, using a guiding-center approximation, in order to allow calculation of ion distribution functions and moments. For the present study we include mirror and parallel electric field forces, and a source of ion cyclotron resonance (ICR) wave heating, thought to be central to the transverse energization of ions. The model is initiated with a steady-state ion density altitude profile and Maxwellian velocity distribution characterizing the initial phase-space conditions for multiple particle trajectories. This project serves to advance our understanding of the drivers and particle dynamics in the auroral ionosphere and to improve data analysis methods for future sounding rocket and satellite missions.

  16. Energetic identification of ions of very low fluence

    International Nuclear Information System (INIS)

    Mut C, D.A.; Balcazar, M.

    2005-01-01

    The calibration of 2 types of plastics is presented (cellulose nitrate and polycarbonate) that detect and identify the energy of helium slight ions (1.5 to 10 MeV) and protons (0.3 to 6 MeV) in flows so low of a single particle /cm 2 . This methodology is of importance in radiological protection to identify the actinides 232 Th, 241 Am, 238 U, 235 U, 237 Np by means of its alpha emissions, or to carry out neutron spectroscopy in an ignored energy field by protons retrocession. The ion identification is adjusted for all the cases to a simple expression of the exponential type. The comparison is achieved among detection efficiencies for the detectors. (Author)

  17. Neutralization of H-- in energetic collisions with multiply charged ions

    International Nuclear Information System (INIS)

    Melchert, F.; Benner, M.; Kruedener, S.; Schulze, R.; Meuser, S.; Huber, K.; Salzborn, E.; Uskov, D.B.; Presnyakov, L.P.

    1995-01-01

    Employing the crossed-beam technique, we have measured absolute cross sections for neutralization of H -- ions in collisions with multiply charged ions Ne q+ (q≤4) and Ar q+ , Xe q+ (q≤8) at center-of-mass energies ranging from 20 to 200 keV. . . It is found that th cross sections are independent of the target ion species. The data are in excellent agreement with quantum calculations. A universal scaling law for the neutralization cross section is given

  18. Transition to H-mode by energetic electrons

    International Nuclear Information System (INIS)

    Itoh, Kimitaka; Itoh, Sanae.

    1992-07-01

    Effect of the electron loss due to the toroidal ripple on an H-mode transition is studied. When energetic electrons exist in tokamaks, e.g., in the case of the current drive by lower hybrid (LH) waves, the edge electric field can show the bifurcation to the more positive value. In this state, both the electron loss and ion loss (such as loss cone loss) are reduced. The criterion for the transition is derived. Comparison with H-mode in JT-60 LH plasma shows a qualitative agreement. (author)

  19. Energetics and Dynamics of Decaying Cluster Ions

    Czech Academy of Sciences Publication Activity Database

    Gluch, K.; Fedor, J.; Matt-Leubner, S.; Parajuli, R.; Mair, C.; Stamatovic, A.; Echt, O.; Lifshitz, C.; Harvey, J.; Hagelberg, F.; Herman, Zdeněk; Probst, M.; Scheier, P.; Märk, T. D.

    2003-01-01

    Roč. 24, 1/3 (2003), s. 131-136 ISSN 1434-6060 R&D Projects: GA ČR GA203/00/0632 Grant - others:European Commission(XE) Euroatom Institutional research plan: CEZ:AV0Z4040901 Keywords : surface-induced reactions * kinetics-energy release * polyatomic ions Subject RIV: CF - Physical ; Theoretical Chemistry Impact factor: 1.612, year: 2003

  20. Origin of energetic ions in the polar cusp inferred from ion composition measurements by the Viking satellite

    Directory of Open Access Journals (Sweden)

    G. Kremser

    1995-06-01

    Full Text Available The magnetospheric ion composition spectrometer MICS on the Swedish Viking satellite provided measurements of the ion composition in the energy range 10.1 keV/e\\leqE/Q\\leq326.0 keV/e. Data obtained during orbit 842 were used to investigate the ion distribution in the northern polar cusp and its vicinity. The satellite traversed the outer ring current, boundary region, cusp proper and plasma mantle during its poleward movement. H+ and He++ ions were encountered in all of these regions. He+ ions were present only in the ring current. The number of O+ and O++ ions was very small. Heavy high-charge state ions typical for the solar wind were observed for the first time, most of them in the poleward part of the boundary region and in the cusp proper. The H+ ions exhibited two periods with high intensities. One of them, called the BR/CP event, appeared at energies up to 50 keV. It started at the equatorward limit of the boundary region and continued into the cusp proper. Energy spectra indicate a ring current origin for the BR/CP event. Pitch angle distributions show downward streaming of H+ ions at its equatorward limit and upward streaming on the poleward side. This event is interpreted as the result of pitch angle scattering of ring current ions by fluctuations in the magnetopause current layer in combination with poleward convection. The other of the two periods with high H+ ion intensities, called the accelerated ion event, was superimposed on the BR/CP event. It was restricted to energies \\leq15 keV and occurred in the poleward part of the boundary region. This event is regarded as the high-energy tail of magnetosheath ions that were accelerated while penetrating into the magnetosphere. The cusp region thus contains ions of magnetospheric as well as of magnetosheath origin. The appearance of the ions depends, in addition to the ion source, on the magnetic field configuration and dynamic processes inside and close to the cusp.

  1. Energetic ion acceleration at collisionless shocks

    Science.gov (United States)

    Decker, R. B.; Vlahos, L.

    1985-01-01

    An example is presented from a test particle simulation designed to study ion acceleration at oblique turbulent shocks. For conditions appropriate at interplanetary shocks near 1 AU, it is found that a shock with theta sub B n = 60 deg is capable of producing an energy spectrum extending from 10 keV to approx. 1 MeV in approx 1 hour. In this case total energy gains result primarily from several separate episodes of shock drift acceleration, each of which occurs when particles are scattered back to the shock by magnetic fluctuations in the shock vicinity.

  2. Energetic ion acceleration at collisionless shocks

    International Nuclear Information System (INIS)

    Decker, R.B.; Vlahos, L.

    1985-01-01

    An example is presented from a test particle simulation designed to study ion acceleration at oblique turbulent shocks. For conditions appropriate at interplanetary shocks near 1 AU, it is found that a shock with theta sub B n = 60 deg is capable of producing an energy spectrum extending from 10 keV to approx 1 MeV in approx 1 hour. In this case total energy gains result primarily from several separate episodes of shock drift acceleration, each of which occurs when particles are scattered back to the shock by magnetic fluctuations in the shock vicinity

  3. Effects of ion beam irradiation on semiconductor devices

    Energy Technology Data Exchange (ETDEWEB)

    Nashiyama, Isamu; Hirao, Toshio; Itoh, Hisayoshi; Ohshima, Takeshi [Japan Atomic Energy Research Inst., Takasaki, Gunma (Japan). Takasaki Radiation Chemistry Research Establishment

    1997-03-01

    Energetic heavy-ion irradiation apparatus has been developed for single-event effects (SEE) testing. We have applied three irradiation methods such as a scattered-ion irradiation method, a recoiled-atom irradiation method, and a direct-beam irradiation method to perform SEE testing efficiently. (author)

  4. Workshop summary. Biomedical and Space-Related Research with Heavy Ions at the BEVALAC

    Science.gov (United States)

    Schimmerling, W.; Curtis, S. B.

    1989-01-01

    The authors provide an overview of papers presented at a workshop on Biomedical and Space-Related Research with Heavy Ions at the BEVALAC at Lawrence Berkeley Laboratory. Goals of the meeting were to determine the critical experiments using heavy ions as probes in radiation physics, radiation chemistry, macromolecular and cellular biology, evolution science, basic neurophysiology, and medical therapies; how beam lines and facilities at Lawrence Berkeley Laboratory can be improved for these experiments; and implications in priorities and funding for national policy. Workshop topics included physics and facilities, cellular and molecular biology, tissue radiobiology, and the future of heavy ion research.

  5. A neutral polydisulfide containing Gd(III) DOTA monoamide as a redox-sensitive biodegradable macromolecular MRI contrast agent.

    Science.gov (United States)

    Ye, Zhen; Zhou, Zhuxian; Ayat, Nadia; Wu, Xueming; Jin, Erlei; Shi, Xiaoyue; Lu, Zheng-Rong

    2016-01-01

    This work aims to develop safe and effective gadolinium (III)-based biodegradable macromolecular MRI contrast agents for blood pool and cancer imaging. A neutral polydisulfide containing macrocyclic Gd-DOTA monoamide (GOLS) was synthesized and characterized. In addition to studying the in vitro degradation of GOLS, its kinetic stability was also investigated in an in vivo model. The efficacy of GOLS for contrast-enhanced MRI was examined with female BALB/c mice bearing 4T1 breast cancer xenografts. The pharmacokinetics, biodistribution, and metabolism of GOLS were also determined in mice. GOLS has an apparent molecular weight of 23.0 kDa with T1 relaxivities of 7.20 mM(-1) s(-1) per Gd at 1.5 T, and 6.62 mM(-1) s(-1) at 7.0 T. GOLS had high kinetic inertness against transmetallation with Zn(2+) ions, and its polymer backbone was readily cleaved by L-cysteine. The agent showed improved efficacy for blood pool and tumor MR imaging. The structural effect on biodistribution and in vivo chelation stability was assessed by comparing GOLS with Gd(HP-DO3A), a negatively charged polydisulfide containing Gd-DOTA monoamide GODC, and a polydisulfide containing Gd-DTPA-bisamide (GDCC). GOLS showed high in vivo chelation stability and minimal tissue deposition of gadolinium. The biodegradable macromolecular contrast agent GOLS is a promising polymeric contrast agent for clinical MR cardiovascular imaging and cancer imaging. Copyright © 2015 John Wiley & Sons, Ltd.

  6. Direct cryosorption pumping of an energetic hydrogen ion beam

    International Nuclear Information System (INIS)

    Schwenterly, S.W.; Ryan, P.M.; Tsai, C.C.

    1979-01-01

    Cryosorption pumps (CSP) are a prime candidate for the pumping of helium and deuterium-tritium (D-T) in tokamak divertor systems and may also see service in neutral beam injectors. However, the ability of a CSP to take high energy ions escaping from a plasma or neutral beam has not previously been demonstrated. In this study we arranged a 10-cm ion source of the type used in the Oak Ridge Tokamak (ORMAK) to inject a beam of ions directly into the inlet of a CSP. The pump contained two chevron baffles at 100K and 15K as well as a 15K cryosorption surface covered with a type 5A molecular sieve. The cryosurfaces were cooled by a closed-cycle helium refrigerator. For hydrogen ion pulses up to 11.5-keV energy and 1.3-A current, the pressure maintained during the pulse was only a few percent higher than that maintained with an equal flow of cold neutral gas. Pulse lengths of 100-300 ms were used. Calorimetric measurements showed that 40-60% of the I-V power was incident on the pump inlet. Cool-down and regeneration behavior of the pump will also be discussed

  7. Mechanisms and energetics of surface atomic processes

    International Nuclear Information System (INIS)

    Tsong, T.T.

    1991-01-01

    The energies involved in various surface atomic processes such as surface diffusion, the binding of small atomic clusters on the surface, the interaction between two adsorbed atoms, the dissociation of an atom from a small cluster or from a surface layer, the binding of kink size atoms or atoms at different adsorption sites to the surface etc., can be derived from an analysis of atomically resolved field ion microscope images and a kinetic energy measurement of low temperature field desorbed ions using the time-of-flight atom-probe field ion microscope. These energies can be used to compare with theories and to understand the transport of atoms on the surface in atomic reconstructions, epitaxial growth of surface layers and crystal growth, adsorption layer superstructure formation, and also why an atomic ordering or atomic reconstruction at the surface is energetically favored. Mechanisms of some of the surface atomic processes are also clarified from these quantitative, atomic resolution studies. In this paper work in this area is bris briefly reviewed

  8. ENERGETIC PHOTON AND ELECTRON INTERACTIONS WITH POSITIVE IONS

    Energy Technology Data Exchange (ETDEWEB)

    Phaneuf, Ronald A. [UNR

    2013-07-01

    The objective of this research is a deeper understanding of the complex multi-electron interactions that govern inelastic processes involving positive ions in plasma environments, such as those occurring in stellar cares and atmospheres, x-ray lasers, thermonuclear fusion reactors and materials-processing discharges. In addition to precision data on ionic structure and transition probabilities, high resolution quantitative measurements of ionization test the theoretical methods that provide critical input to computer codes used for plasma modeling and photon opacity calculations. Steadily increasing computational power and a corresponding emphasis on simulations gives heightened relevance to precise and accurate benchmark data. Photons provide a highly selective probe of the internal electronic structure of atomic and molecular systems, and a powerful means to better understand more complex electron-ion interactions.

  9. Origin of energetic ions in the polar cusp inferred from ion composition measurements by the Viking satellite

    Directory of Open Access Journals (Sweden)

    G. Kremser

    Full Text Available The magnetospheric ion composition spectrometer MICS on the Swedish Viking satellite provided measurements of the ion composition in the energy range 10.1 keV/eleqE/Qleq326.0 keV/e. Data obtained during orbit 842 were used to investigate the ion distribution in the northern polar cusp and its vicinity. The satellite traversed the outer ring current, boundary region, cusp proper and plasma mantle during its poleward movement. H+ and He++ ions were encountered in all of these regions. He+ ions were present only in the ring current. The number of O+ and O++ ions was very small. Heavy high-charge state ions typical for the solar wind were observed for the first time, most of them in the poleward part of the boundary region and in the cusp proper. The H+ ions exhibited two periods with high intensities. One of them, called the BR/CP event, appeared at energies up to 50 keV. It started at the equatorward limit of the boundary region and continued into the cusp proper. Energy spectra indicate a ring current origin for the BR/CP event. Pitch angle distributions show downward streaming of H+ ions at its equatorward limit and upward streaming on the poleward side. This event is interpreted as the result of pitch angle scattering of ring current ions by fluctuations in the magnetopause current layer in combination with poleward convection. The other of the two periods with high H+ ion intensities, called the accelerated ion event, was superimposed on the BR/CP event. It was restricted to energies leq15 keV and occurred in the poleward part of the boundary region. This event is regarded as the high-energy tail of magnetosheath ions that were accelerated while penetrating into the magnetosphere. The cusp region thus contains ions of magnetospheric as well as of magnetosheath origin. The appearance of the ions depends, in addition to the ion source, on the

  10. Near equality of ion phase space densities at earth, Jupiter, and Saturn

    Science.gov (United States)

    Cheng, A. F.; Krimigis, S. M.; Armstrong, T. P.

    1985-01-01

    Energetic-ion phase-space density profiles are strikingly similar in the inner magnetospheres of earth, Jupiter, and Saturn for ions of first adiabatic invariant near 100 MeV/G and small mirror latitudes. Losses occur inside L approximately equal to 7 for Jupiter and Saturn and inside L approximately equal to 5 at earth. At these L values there exist steep plasma-density gradients at all three planets, associated with the Io plasma torus at Jupiter, the Rhea-Dione-Tethys torus at Saturn, and the plasmasphere at earth. Measurements of ion flux-tube contents at Jupiter and Saturn by the low-energy charged-particle experiment show that these are similar (for O ions at L = 5-9) to those at earth (for protons at L = 2-6). Furthermore, the thermal-ion flux-tube contents from Voyager plasma-science data at Jupiter and Saturn are also very nearly equal, and again similar to those at earth, differing by less than a factor of 3 at the respective L values. The near equality of energetic and thermal ion flux-tube contents at earth, Jupiter, and Saturn suggests the possibility of strong physical analogies in the interaction between plasma and energetic particles at the plasma tori/plasma sheets of Jupiter and Saturn and the plasmasphere of earth.

  11. Metal ion implantation: Conventional versus immersion

    International Nuclear Information System (INIS)

    Brown, I.G.; Anders, A.; Anders, S.; Dickinson, M.R.; MacGill, R.A.

    1994-01-01

    Vacuum-arc-produced metal plasma can be used as the ion feedstock material in an ion source for doing conventional metal ion implantation, or as the immersing plasma for doing plasma immersion ion implantation. The basic plasma production method is the same in both cases; it is simple and efficient and can be used with a wide range of metals. Vacuum arc ion sources of different kinds have been developed by the authors and others and their suitability as a metal ion implantation tool has been well established. Metal plasma immersion surface processing is an emerging tool whose characteristics and applications are the subject of present research. There are a number of differences between the two techniques, both in the procedures used and in the modified surfaces created. For example, the condensibility of metal plasma results in thin film formation and subsequent energetic implantation is thus done through the deposited layer; in the usual scenario, this recoil implantation and the intermixing it produces is a feature of metal plasma immersion but not of conventional energetic ion implantation. Metal plasma immersion is more suited (but not limited) to higher doses (>10 17 cm -2 ) and lower energies (E i < tens of keV) than the usual ranges of conventional metal ion implantation. These and other differences provide these vacuum-arc-based surface modification tools with a versatility that enhances the overall technological attractiveness of both

  12. Application of ion beams for polymeric carbon based biomaterials

    International Nuclear Information System (INIS)

    Evelyn, A.L.

    2001-01-01

    Ion beams have been shown to be quite suitable for the modification and analysis of carbon based biomaterials. Glassy polymeric carbon (GPC), made from cured phenolic resins, has a high chemical inertness that makes it useful as a biomaterial in medicine for drug delivery systems and for the manufacture of heart valves and other prosthetic devices. Low and high-energy ion beams have been used, with both partially and fully cured phenolic resins, to enhance biological cell/tissue growth on, and to increase tissue adhesion to GPC surfaces. Samples bombarded with energetic ion beams in the keV to MeV range exhibited increased surface roughness, measured using optical microscopy and atomic force microscopy. Ion beams were also used to perform nuclear reaction analyses of GPC encapsulated drugs for use in internal drug delivery systems. The results from the high energy bombardment were more dramatic and are shown in this paper. The interaction of energetic ions has demonstrated the useful application of ion beams to enhance the properties of carbon-based biomaterials

  13. Theory of magnetospheric hydromagnetic waves excited by energetic ring-current protons

    International Nuclear Information System (INIS)

    Chen, Liu; Hasegawa, Akira.

    1987-06-01

    A general theoretical formulation, allowing finite ion Larmor radii, general magnetic field geometries and plasma equilibria, has been developed to investigate excitations of magnetohydrodynamic (MHD) Alfven waves within the earth's magnetosphere by the storm-time energetic ring-current protons. In particular, it is found that for adiabatically injected protons, various predicted instability properties are consistent with satellite observations. 8 refs

  14. Characteristics of > 290 keV magnetosheath ions

    Directory of Open Access Journals (Sweden)

    A. Rigas

    Full Text Available We performed a statistical analysis of 290-500 keV ion data obtained by IMP-8 during the years 1982-1988 within the earth's magnetosheath and analysed in detail some time periods withdistinct ion bursts. These studies reveal the following characteristics for magnetosheath 290-500 keV energetic ions: (a the occurrence frequency and the flux of ions increase with increasing geomagnetic activity as indicated by the Kp index; the occurrence frequency was found to be as high as P > 42% for Kp > 2, (b the occurrence frequency in the dusk magnetosheath was found to be slightly dependent on the local time and ranged between ~30% and ~46% for all Kp values; the highest occurrence frequency was detected near the dusk magnetopause (21 LT, (c the high energy ion bursts display a dawn-dusk asymmetry in their maximum fluxes, with higher fluxes appearing in the dusk magnetosheath, and (d the observations in the dusk magnetosheath suggest that there exist intensity gradients of energetic ions from the bow shock toward the magnetopause. The statistical results are consistent with the concept that leakage of magnetospheric ions from the dusk magnetopause is a semi-permanent physical process often providing the magnetosheath with high energy (290-500 keV ions.Key words. Magnetospheric physics (magnetosheath; planetary magnetospheres. Space plasma physics (shock waves.

  15. Bcl-xL regulates mitochondrial energetics by stabilizing the inner membrane potential.

    Science.gov (United States)

    Chen, Ying-Bei; Aon, Miguel A; Hsu, Yi-Te; Soane, Lucian; Teng, Xinchen; McCaffery, J Michael; Cheng, Wen-Chih; Qi, Bing; Li, Hongmei; Alavian, Kambiz N; Dayhoff-Brannigan, Margaret; Zou, Shifa; Pineda, Fernando J; O'Rourke, Brian; Ko, Young H; Pedersen, Peter L; Kaczmarek, Leonard K; Jonas, Elizabeth A; Hardwick, J Marie

    2011-10-17

    Mammalian Bcl-x(L) protein localizes to the outer mitochondrial membrane, where it inhibits apoptosis by binding Bax and inhibiting Bax-induced outer membrane permeabilization. Contrary to expectation, we found by electron microscopy and biochemical approaches that endogenous Bcl-x(L) also localized to inner mitochondrial cristae. Two-photon microscopy of cultured neurons revealed large fluctuations in inner mitochondrial membrane potential when Bcl-x(L) was genetically deleted or pharmacologically inhibited, indicating increased total ion flux into and out of mitochondria. Computational, biochemical, and genetic evidence indicated that Bcl-x(L) reduces futile ion flux across the inner mitochondrial membrane to prevent a wasteful drain on cellular resources, thereby preventing an energetic crisis during stress. Given that F(1)F(O)-ATP synthase directly affects mitochondrial membrane potential and having identified the mitochondrial ATP synthase β subunit in a screen for Bcl-x(L)-binding partners, we tested and found that Bcl-x(L) failed to protect β subunit-deficient yeast. Thus, by bolstering mitochondrial energetic capacity, Bcl-x(L) may contribute importantly to cell survival independently of other Bcl-2 family proteins.

  16. EDITORIAL: Special issue containing papers presented at the 11th IAEA Technical Meeting on Energetic Particles in Magnetic Confinement Systems Special issue containing papers presented at the 11th IAEA Technical Meeting on Energetic Particles in Magnetic Confinement Systems

    Science.gov (United States)

    Kolesnichenko, Ya.

    2010-08-01

    The history of fusion research resembles the way in which one builds skyscrapers: laying the first foundation stone, one thinks about the top of the skyscraper. At the early stages of fusion, when it became clear that the thermonuclear reactor would operate with DT plasma confined by the magnetic field, the study of the `top item'—the physics of 3.5 MeV alpha particles produced by the DT fusion reaction—was initiated. The first publications on this topic appeared as long ago as the 1960s. At that time, because the physics of alpha particles was far from the experimental demand, investigations were carried out by small groups of theoreticians who hoped to discover important and interesting phenomena in this new research area. Soon after the beginning of the work, theoreticians discovered that alpha particles could excite various instabilities in fusion plasmas. In particular, at the end of the 1960s an Alfvén instability driven by alpha particles was predicted. Later it turned out that a variety of Alfvén instabilities with very different features does exist. Instabilities with perturbations of the Alfvénic type play an important role in current experiments; it is likely that they will affect plasma performance in ITER and future reactors. The first experimental manifestation of instabilities excited by superthermal particles in fusion devices was observed in the PDX tokamak in 1983. In this device a large-scale instability—the so called `fishbone instability'—associated with ions produced by the neutral beam injection resulted in a loss of a large fraction of the injected energy. Since then, the study of energetic-ion-driven instabilities and the effects produced by energetic ions in fusion plasmas has attracted the growing attention of both experimentalists and theorists. Recognizing the importance of this topic, the first conference on fusion alpha particles was held in 1989 in Kyiv under the auspices of the IAEA. The meeting in Kyiv and several

  17. Bifunctional ion exchange resin with thiol and quaternary ammonium groups for the sorption of arsenate

    Czech Academy of Sciences Publication Activity Database

    Hrubý, Martin; Korostyatynets, V.; Beneš, Milan J.; Matějka, Z.

    2003-01-01

    Roč. 68, č. 11 (2003), s. 2159-2170 ISSN 0010-0765 R&D Projects: GA ČR GA203/01/1310 Institutional research plan: CEZ:AV0Z4050913 Keywords : ion exchange rs * functionalized resin s * polymers Subject RIV: CD - Macromolecular Chemistry Impact factor: 1.041, year: 2003

  18. Enhanced Scattering of Diffuse Ions on Front of the Earth's Quasi-Parallel Bow Shock: a Case Study

    Science.gov (United States)

    Kis, A.; Matsukiyo, S.; Otsuka, F.; Hada, T.; Lemperger, I.; Dandouras, I. S.; Barta, V.; Facsko, G. I.

    2017-12-01

    In the analysis we present a case study of three energetic upstream ion events at the Earth's quasi-parallel bow shock based on multi-spacecraft data recorded by Cluster. The CIS-HIA instrument onboard Cluster provides partial energetic ion densities in 4 energy channels between 10 and 32 keV.The difference of the partial ion densities recorded by the individual spacecraft at various distances from the bow shock surface makes possible the determination of the spatial gradient of energetic ions.Using the gradient values we determined the spatial profile of the energetic ion partial densities as a function of distance from the bow shock and we calculated the e-folding distance and the diffusion coefficient for each event and each ion energy range. Results show that in two cases the scattering of diffuse ions takes place in a normal way, as "by the book", and the e-folding distance and diffusion coefficient values are comparable with previous results. On the other hand, in the third case the e-folding distance and the diffusion coefficient values are significantly lower, which suggests that in this case the scattering process -and therefore the diffusive shock acceleration (DSA) mechanism also- is much more efficient. Our analysis provides an explanation for this "enhanced" scattering process recorded in the third case.

  19. Macromolecular crystallography research at Trombay

    International Nuclear Information System (INIS)

    Kannan, K.K.; Chidamrabam, R.

    1983-01-01

    Neutron diffraction studies of hydrogen positions in small molecules of biological interest at Trombay have provided valuable information that has been used in protein and enzyme structure model-building and in developing hydrogen bond potential functions. The new R-5 reactor is expected to provide higher neutron fluxes and also make possible small-angle neutron scattering studies of large biomolecules and bio-aggregates. In the last few years infrastructure facilities have also been established for macromolecular x-ray crystallography research. Meanwhile, the refinement of carbonic hydrases and lyysozyme structures have been carried out and interesting results obtained on protein dynamics and structure-function relationships. Some interesting presynaptic toxin phospholipases have also taken up for study. (author)

  20. Energetic Particle Loss Estimates in W7-X

    Science.gov (United States)

    Lazerson, Samuel; Akaslompolo, Simppa; Drevlak, Micheal; Wolf, Robert; Darrow, Douglass; Gates, David; W7-X Team

    2017-10-01

    The collisionless loss of high energy H+ and D+ ions in the W7-X device are examined using the BEAMS3D code. Simulations of collisionless losses are performed for a large ensemble of particles distributed over various flux surfaces. A clear loss cone of particles is present in the distribution for all particles. These simulations are compared against slowing down simulations in which electron impact, ion impact, and pitch angle scattering are considered. Full device simulations allow tracing of particle trajectories to the first wall components. These simulations provide estimates for placement of a novel set of energetic particle detectors. Recent performance upgrades to the code are allowing simulations with > 1000 processors providing high fidelity simulations. Speedup and future works are discussed. DE-AC02-09CH11466.

  1. Dexamethasone attenuates grain sorghum dust extract-induced increase in macromolecular efflux in vivo.

    Science.gov (United States)

    Akhter, S R; Ikezaki, H; Gao, X P; Rubinstein, I

    1999-05-01

    The purpose of this study was to determine whether dexamethasone attenuates grain sorghum dust extract-induced increase in macromolecular efflux from the in situ hamster cheek pouch and, if so, whether this response is specific. By using intravital microscopy, we found that an aqueous extract of grain sorghum dust elicited significant, concentration-dependent leaky site formation and increase in clearance of FITC-labeled dextran (FITC-dextran; mol mass, 70 kDa) from the in situ hamster cheek pouch (P grain sorghum dust extract- and substance P-induced increases in macromolecular efflux from the in situ hamster cheek pouch in a specific fashion.

  2. The Joint Structural Biology Group beam lines at the ESRF: Modern macromolecular crystallography

    CERN Document Server

    Mitchell, E P

    2001-01-01

    Macromolecular crystallography has evolved considerably over the last decade. Data sets in under an hour are now possible on high throughput beam lines leading to electron density and, possibly, initial models calculated on-site. There are five beam lines currently dedicated to macromolecular crystallography: the ID14 complex and BM-14 (soon to be superseded by ID-29). These lines handle over five hundred projects every six months and demand is increasing. Automated sample handling, alignment and data management protocols will be required to work efficiently with this demanding load. Projects developing these themes are underway within the JSBG.

  3. Isotope labeling for NMR studies of macromolecular structure and interactions

    International Nuclear Information System (INIS)

    Wright, P.E.

    1994-01-01

    Implementation of biosynthetic methods for uniform or specific isotope labeling of proteins, coupled with the recent development of powerful heteronuclear multidimensional NMR methods, has led to a dramatic increase in the size and complexity of macromolecular systems that are now amenable to NMR structural analysis. In recent years, a new technology has emerged that combines uniform 13 C, 15 N labeling with heteronuclear multidimensional NMR methods to allow NMR structural studies of systems approaching 25 to 30 kDa in molecular weight. In addition, with the introduction of specific 13 C and 15 N labels into ligands, meaningful NMR studies of complexes of even higher molecular weight have become feasible. These advances usher in a new era in which the earlier, rather stringent molecular weight limitations have been greatly surpassed and NMR can begin to address many central biological problems that involve macromolecular structure, dynamics, and interactions

  4. Isotope labeling for NMR studies of macromolecular structure and interactions

    Energy Technology Data Exchange (ETDEWEB)

    Wright, P.E. [Scripps Research Institute, La Jolla, CA (United States)

    1994-12-01

    Implementation of biosynthetic methods for uniform or specific isotope labeling of proteins, coupled with the recent development of powerful heteronuclear multidimensional NMR methods, has led to a dramatic increase in the size and complexity of macromolecular systems that are now amenable to NMR structural analysis. In recent years, a new technology has emerged that combines uniform {sup 13}C, {sup 15}N labeling with heteronuclear multidimensional NMR methods to allow NMR structural studies of systems approaching 25 to 30 kDa in molecular weight. In addition, with the introduction of specific {sup 13}C and {sup 15}N labels into ligands, meaningful NMR studies of complexes of even higher molecular weight have become feasible. These advances usher in a new era in which the earlier, rather stringent molecular weight limitations have been greatly surpassed and NMR can begin to address many central biological problems that involve macromolecular structure, dynamics, and interactions.

  5. Radial transport of storm time ring current ions

    Science.gov (United States)

    Lui, A. T. Y.

    1993-01-01

    Radial transport of energetic ions for the development of the main phase of geomagnetic storms is investigated with data from the medium energy particle analyzer (MEPA) on the Charge Composition Explorer spacecraft, which monitored protons, helium ions, and the carbon-nitrogen-oxygen group, which is mostly dominated by oxygen ions. From a study of four geomagnetic storms, we show that the flux increase of these ions in the inner ring current region can be accounted for by an inward displacement of the ring current population by 0.5 to 3.5 R(E). There is a general trend that a larger inward displacement occurs at higher L shells than at lower ones. These results are in agreement with previous findings. The radially injected population consists of the prestorm population modified by substorm injections which occur on a much shorter time scale than that for a storm main phase. It is also found that the inward displacement is relatively independent of ion mass and energy, suggesting that the radial transport of these energetic ions is effected primarily by convective motion from a large electric field or by diffusion resulting from magnetic field fluctuations.

  6. Macromolecular shape and interactions in layer-by-layer assemblies within cylindrical nanopores.

    Science.gov (United States)

    Lazzara, Thomas D; Lau, K H Aaron; Knoll, Wolfgang; Janshoff, Andreas; Steinem, Claudia

    2012-01-01

    Layer-by-layer (LbL) deposition of polyelectrolytes and proteins within the cylindrical nanopores of anodic aluminum oxide (AAO) membranes was studied by optical waveguide spectroscopy (OWS). AAO has aligned cylindrical, nonintersecting pores with a defined pore diameter d(0) and functions as a planar optical waveguide so as to monitor, in situ, the LbL process by OWS. The LbL deposition of globular proteins, i.e., avidin and biotinylated bovine serum albumin was compared with that of linear polyelectrolytes (linear-PEs), both species being of similar molecular weight. LbL deposition within the cylindrical AAO geometry for different pore diameters (d(0) = 25-80 nm) for the various macromolecular species, showed that the multilayer film growth was inhibited at different maximum numbers of LbL steps (n(max)). The value of n(max) was greatest for linear-PEs, while proteins had a lower value. The cylindrical pore geometry imposes a physical limit to LbL growth such that n(max) is strongly dependent on the overall internal structure of the LbL film. For all macromolecular species, deposition was inhibited in native AAO, having pores of d(0) = 25-30 nm. Both, OWS and scanning electron microscopy showed that LbL growth in larger AAO pores (d(0) > 25-30 nm) became inhibited when approaching a pore diameter of d(eff,n_max) = 25-35 nm, a similar size to that of native AAO pores, with d(0) = 25-30 nm. For a reasonable estimation of d(eff,n_max), the actual volume occupied by a macromolecular assembly must be taken into consideration. The results clearly show that electrostatic LbL allowed for compact macromolecular layers, whereas proteins formed loosely packed multilayers.

  7. Influence of high energy ion irradiation on fullerene derivative (PCBM) thin films

    Energy Technology Data Exchange (ETDEWEB)

    Sharma, Trupti, E-mail: tsphy91@gmail.com [Department of Physics, Malaviya National Institute of Technology, Jaipur 302017 (India); Singhal, Rahul; Vishnoi, Ritu [Department of Physics, Malaviya National Institute of Technology, Jaipur 302017 (India); Lakshmi, G.B.V.S. [Inter University Accelerator Centre, Post Box No. 10502, New Delhi 110067 (India); Biswas, S.K. [Department of Metallurgical and Materials Engineering, Malaviya National Institute of Technology, Jaipur 302017 (India)

    2017-04-01

    Highlights: • Spin casted PCBM thin films (∼100 nm) are irradiated with 55 MeV Si{sup 4+} ion beam. • The decrease in band gap is observed after irradiation. • The surface properties is also dependent on incident ion fluences. • Polymerization reactions induced by energetic ions leads to modifications. - Abstract: The modifications produced by 55 MeV Si{sup 4+} swift heavy ion irradiation on the phenyl C{sub 61} butyric acid methyl ester (PCBM) thin films (thickness ∼ 100 nm) has been enlightened. The PCBM thin films were irradiated at 1 × 10{sup 10}, 1 × 10{sup 11} and 1 × 10{sup 12} ions/cm{sup 2} fluences. After ion irradiation, the decreased optical band gap and FTIR band intensities were observed. The Raman spectroscopy reveals the damage produced by energetic ions. The morphological variation were investigated by atomic force microscopy and contact angle measurements and observed to be influenced by incident ion fluences. After 10{sup 11} ions/cm{sup 2} fluence, the overlapping of ion tracks starts and produced overlapping effects.

  8. Surface Thermometry of Energetic Materials by Laser-Induced Fluorescence

    Science.gov (United States)

    1989-09-01

    at 34 yttrium- aluminum -garnet (Dy:YAG). The simplified energy diagram of Dy:YAG is shown in Fig. 1. Absorbed laser light (at 355 nrm) can 5 excite the...the thermometric technique on a surface similar to that of an energetic material, a thermal-setting plastic supplied by Buehler, Ltd., was employed...temperature over the temperature range of interest. The rare-earth ion dysprosium (Dy) doped into a yttrium- aluminum -garnet (YAG) crystal was I determined

  9. Measuring Radiation Damage from Heavy Energetic Ions in Aluminum

    Energy Technology Data Exchange (ETDEWEB)

    Kostin, M., PI-MSU; Ronningen, R., PI-MSU; Ahle, L., PI-LLNL; Gabriel, T., Scientific Investigation and Development; Mansur, L., PI-ORNL; Leonard, K., ORNL; Mokhov, N., FNAL; Niita, K., RIST, Japan

    2009-02-21

    An intense beam of 122 MeV/u (9.3 GeV) 76Ge ions was stopped in aluminum samples at the Coupled Cyclotron Facility at NSCL, MSU. Attempts were made at ORNL to measure changes in material properties by measuring changes in electrical resistivity and microhardness, and by transmission electron microscopy characterization, for defect density caused by radiation damage, as a function of depth and integrated ion flux. These measurements are relevant for estimating damage to components at a rare isotope beam facility.

  10. Variationally optimal selection of slow coordinates and reaction coordinates in macromolecular systems

    Science.gov (United States)

    Noe, Frank

    To efficiently simulate and generate understanding from simulations of complex macromolecular systems, the concept of slow collective coordinates or reaction coordinates is of fundamental importance. Here we will introduce variational approaches to approximate the slow coordinates and the reaction coordinates between selected end-states given MD simulations of the macromolecular system and a (possibly large) basis set of candidate coordinates. We will then discuss how to select physically intuitive order paremeters that are good surrogates of this variationally optimal result. These result can be used in order to construct Markov state models or other models of the stationary and kinetics properties, in order to parametrize low-dimensional / coarse-grained model of the dynamics. Deutsche Forschungsgemeinschaft, European Research Council.

  11. Means for obtaining a metal ion beam from a heavy-ion cyclotron source

    Science.gov (United States)

    Hudson, E.D.; Mallory, M.L.

    1975-08-01

    A description is given of a modification to a cyclotron ion source used in producing a high intensity metal ion beam. A small amount of an inert support gas maintains the usual plasma arc, except that it is necessary for the support gas to have a heavy mass, e.g., xenon or krypton as opposed to neon. A plate, fabricated from the metal (or anything that can be sputtered) to be ionized, is mounted on the back wall of the ion source arc chamber and is bombarded by returning energetic low-charged gas ions that fail to cross the initial accelerating gap between the ion source and the accelerating electrode. Some of the atoms that are dislodged from the plate by the returning gas ions become ionized and are extracted as a useful beam of heavy ions. (auth)

  12. Effect of Defects on Mechanisms of Initiation and Energy Release in Energetic Molecular Crystals

    Science.gov (United States)

    2011-02-10

    also examined other energetic and reactive materials such as 1,3,5,7 cyclooctatetraene (COT) and potassium chlorate (KClO3) and ringed hydrocarbons...the space charge induced by the diffusive separation of potassium and fluoride ions in the shock wave affects polarization currents and depends on

  13. Superhydrophobic hybrid membranes by grafting arc-like macromolecular bridges on graphene sheets: Synthesis, characterization and properties

    Science.gov (United States)

    Mo, Zhao-Hua; Luo, Zheng; Huang, Qiang; Deng, Jian-Ping; Wu, Yi-Xian

    2018-05-01

    Grafting single end-tethered polymer chains on the surface of graphene is a conventional way to modify the surface properties of graphene oxide. However, grafting arc-like macromolecular bridges on graphene surfaces has been barely reported. Herein, a novel arc-like polydimethylsiloxane (PDMS) macromolecular bridges grafted graphene sheets (GO-g-Arc PDMS) was successfully synthesized via a confined interface reaction at 90 °C. Both the hydrophilic α- and ω-amino groups of linear hydrophobic NH2-PDMS-NH2 macromolecular chains rapidly reacted with epoxy and carboxyl groups on the surfaces of graphene oxide in water suspension to form arc-like PDMS macromolecular bridges on graphene sheets. The grafting density of arc-like PDMS bridges on graphene sheets can reach up to 0.80 mmol g-1 or 1.32 arc-like bridges per nm2 by this confined interface reaction. The water contact angle (WCA) of the hybrid membrane could be increased with increasing both the grafting density and content of covalent arc-like bridges architecture. The superhydrophobic hybrid membrane with a WCA of 153.4° was prepared by grinding of the above arc-like PDMS bridges grafted graphene hybrid, dispersing in ethanol and filtrating by organic filter membrane. This superhydrophobic hybrid membrane shows good self-cleaning and complete oil-water separation properties, which provides potential applications in anticontamination coating and oil-water separation. To the best of our knowledge, this is the first report on the synthesis of functional hybrid membranes by grafting arc-like PDMS macromolecular bridges on graphene sheets via a confined interface reaction.

  14. Seventh meeting of the ITER physics expert group on energetic particles, heating and steady state operations

    International Nuclear Information System (INIS)

    Gormezano, C.

    1999-01-01

    The seventh meeting of the ITER Physics Group on energetic particles, heating and steady state operation was held at CEN/Cadarache from 14 to 18 September 1999. This was the first meeting following the redefinition of the Expert Group structure and it was also the first meeting without participation of US physicists. The main topics covered were: 1. Energetic Particles, 2. Ion Cyclotron Resonance Heating, 3. Lower Hybrid Current Drive, 4. Electron Cyclotron Resonance Heating and Current Drive, 5. Neutral Beam Injection, 6. Steady-State Aspects

  15. Energetic materials and methods of tailoring electrostatic discharge sensitivity of energetic materials

    Energy Technology Data Exchange (ETDEWEB)

    Daniels, Michael A.; Heaps, Ronald J.; Wallace, Ronald S.; Pantoya, Michelle L.; Collins, Eric S.

    2016-11-01

    An energetic material comprising an elemental fuel, an oxidizer or other element, and a carbon nanofiller or carbon fiber rods, where the carbon nanofiller or carbon fiber rods are substantially homogeneously dispersed in the energetic material. Methods of tailoring the electrostatic discharge sensitivity of an energetic material are also disclosed.

  16. Chemical behavior of energetic deuterium implanted into silicon carbide

    International Nuclear Information System (INIS)

    Iguchi, Kazunari; Morimoto, Yasutomi; Shimada, Asako; Inuduka, Nobuo; Okuno, Kenji; Nakamura, Hirohumi; Nishi, Masataka

    2000-01-01

    Studies on chemical behavior of energetic deuterium (D) ions implanted into SiC were carried out by means of X-ray Photoelectron Spectroscopy (XPS) and Thermal Desorption Spectroscopy (TDS). From XPS results, it was suggested that the implanted D was attracted strongly to Si and/or C. From TDS results, two peaks corresponding to D 2 release appeared near 470 K (1st peak) and 1080 K (2nd peak). The activation energies for the two D 2 release processes were also determined. It was found from these experimental results that the 1st peak seemed to be attributed to deuterium that existed in interstitial. The 2nd peak was considered to be caused by deuterium trapped in lattice defects produced through deuterium ion implantation. (author)

  17. Radial dose distribution around an energetic heavy ion and an ion track structure model

    Energy Technology Data Exchange (ETDEWEB)

    Furukawa, Katsutoshi [Japan Atomic Energy Research Inst., Tokai, Ibaraki (Japan). Tokai Research Establishment; Ohno, Shin-ichi; Namba, Hideki; Taguchi, Mitsumasa; Watanabe, Ritsuko

    1997-03-01

    Ionization currents produced in a small wall-less ionization chamber located at varying distance from the 200 MeV Ni{sup 12+} ion`path traversing Ar gas were measured and utilized to construct a track structure model. Using the LET value of 200 MeV Ni{sup 12+} and G(Fe{sup 3+}) in Fricke solutions (= 15.4) for fast electrons, we estimate G(Fe{sup 3+}) for this ion to be 5.0. (author)

  18. Cation–Anion Interactions within the Nucleic Acid Ion Atmosphere Revealed by Ion Counting

    Science.gov (United States)

    Gebala, Magdalena; Giambasu, George M.; Lipfert, Jan; Bisaria, Namita; Bonilla, Steve; Li, Guangchao; York, Darrin M.; Herschlag, Daniel

    2016-01-01

    The ion atmosphere is a critical structural, dynamic, and energetic component of nucleic acids that profoundly affects their interactions with proteins and ligands. Experimental methods that “count” the number of ions thermodynamically associated with the ion atmosphere allow dissection of energetic properties of the ion atmosphere, and thus provide direct comparison to theoretical results. Previous experiments have focused primarily on the cations that are attracted to nucleic acid polyanions, but have also showed that anions are excluded from the ion atmosphere. Herein, we have systematically explored the properties of anion exclusion, testing the zeroth-order model that anions of different identity are equally excluded due to electrostatic repulsion. Using a series of monovalent salts, we find, surprisingly, that the extent of anion exclusion and cation inclusion significantly depends on salt identity. The differences are prominent at higher concentrations and mirror trends in mean activity coefficients of the electrolyte solutions. Salts with lower activity coefficients exhibit greater accumulation of both cations and anions within the ion atmosphere, strongly suggesting that cation–anion correlation effects are present in the ion atmosphere and need to be accounted for to understand electrostatic interactions of nucleic acids. To test whether the effects of cation–anion correlations extend to nucleic acid kinetics and thermodynamics, we followed the folding of P4–P6, a domain of the Tetrahymena group I ribozyme, via single-molecule fluorescence resonance energy transfer in solutions with different salts. Solutions of identical concentration but lower activity gave slower and less favorable folding. Our results reveal hitherto unknown properties of the ion atmosphere and suggest possible roles of oriented ion pairs or anion-bridged cations in the ion atmosphere for electrolyte solutions of salts with reduced activity. Consideration of these new

  19. Tuning the properties of an anthracene-based PPE-PPV copolymer by fine variation of its macromolecular parameters

    Czech Academy of Sciences Publication Activity Database

    Tinti, F.; Sabir, F. K.; Gazzano, M.; Righi, S.; Ulbricht, C.; Usluer, Ö.; Pokorná, Veronika; Cimrová, Věra; Yohannes, T.; Egbe, D. A. M.; Camaioni, N.

    2013-01-01

    Roč. 3, č. 19 (2013), s. 6972-6980 ISSN 2046-2069 R&D Projects: GA ČR GAP106/12/0827; GA ČR(CZ) GA13-26542S Institutional support: RVO:61389013 Keywords : anthracene-containing PPE-PPV copolymer * macromolecular parameters * structural and transport properties Subject RIV: CD - Macromolecular Chemistry Impact factor: 3.708, year: 2013

  20. Protein Frustratometer 2: a tool to localize energetic frustration in protein molecules, now with electrostatics.

    Science.gov (United States)

    Parra, R Gonzalo; Schafer, Nicholas P; Radusky, Leandro G; Tsai, Min-Yeh; Guzovsky, A Brenda; Wolynes, Peter G; Ferreiro, Diego U

    2016-07-08

    The protein frustratometer is an energy landscape theory-inspired algorithm that aims at localizing and quantifying the energetic frustration present in protein molecules. Frustration is a useful concept for analyzing proteins' biological behavior. It compares the energy distributions of the native state with respect to structural decoys. The network of minimally frustrated interactions encompasses the folding core of the molecule. Sites of high local frustration often correlate with functional regions such as binding sites and regions involved in allosteric transitions. We present here an upgraded version of a webserver that measures local frustration. The new implementation that allows the inclusion of electrostatic energy terms, important to the interactions with nucleic acids, is significantly faster than the previous version enabling the analysis of large macromolecular complexes within a user-friendly interface. The webserver is freely available at URL: http://frustratometer.qb.fcen.uba.ar. © The Author(s) 2016. Published by Oxford University Press on behalf of Nucleic Acids Research.

  1. Minority Ions Acceleration by ICRH: a tool for investigating Burning Plasma Physics

    International Nuclear Information System (INIS)

    Cardinali, A.; Briguglio, S.; Calabro, G.; Crisanti, F.; Di Troia, C.; Fogaccia, G.; Marinucci, M.; Vlad, G.; Zonca, F.

    2008-01-01

    A thorough numerical analysis of the quasi-linear plasma-ICRH wave interaction has been made and will be presented in order to determine the characteristic fast-ion parameters that are necessary for addressing some of the main ITER burning plasma physics issues, e.g. fast ion transport due to collective mode excitations, cross-scale couplings of micro-turbulence with meso-scale fluctuations due to energetic particles, etc. These investigations refer to the Fusion Advanced Studies Torus (FAST), a conceptual tokamak design operating with deuterium plasmas in a dimensionless parameter range as close as possible to that of ITER and equipped with ICRH as a main heating scheme. The destabilization and saturation of fast ion driven Alfvenic modes below and above the EPM (Energetic Particle Modes) stability threshold are investigated by numerical simulations with the HMGC code, which assumes the anisotropic energetic particle distribution function accelerated by ICRH as input. The results of this study, obtained by integration of many numerical tools, are presented and discussed

  2. Spatial profile measurements of ion-confining potentials using novel position-sensitive ion-energy spectrometer arrays

    International Nuclear Information System (INIS)

    Yoshida, M.; Cho, T.; Hirata, M.; Ito, H.; Kohagura, J.; Yatsu, K.; Miyoshi, S.

    2003-01-01

    The first experimental demonstration of simultaneous measurements of temporally and spatially resolved ion-confining potentials phi c and end-loss-ion fluxes I ELA has been carried out during a single plasma discharge alone by the use of newly designed ion-energy-spectrometer arrays installed in both end regions of the GAMMA 10 tandem mirror. This position-sensitive ion-detector structure is proposed to obtain precise ion-energy spectra without any perturbations from simultaneously incident energetic electrons into the arrays. The relation between phi c and I ELA is physically interpreted in terms of Pastukhov's potential confinement theory. In particular, the importance of axisymmetric phi c formation is found for the plasma confinement

  3. Plasma synthesis of hard materials with energetic ions

    International Nuclear Information System (INIS)

    Monteiro, Othon R.

    1999-01-01

    Recent developments in plasma synthesis of hard materials using metal plasma immersion ion implantation and deposition are described. We have produced and characterized a variety of films including doped and undoped DLC (diamond-like carbon) and metal carbides. By using multiple plasma sources operated either synchronously or asynchronously, different metal plasma species can be either blended or linked so as to form mixed-composition films or multilayer structures, and by control of the depositing ion energy, interfaces can be made sharp or graded and the film morphology and microstructure can be widely tailored. Plasma compositional uniformity is important to produce homogeneous films, and therefore effective mixing of plasma streams produced by the filtered cathodic vacuum arcs is very important. Specific systems described here include amorphic diamond, and TiC. We outline the deposition technique employed in this investigation, and summarize the results of the characterization of the films

  4. Energetics Conditioning Facility

    Data.gov (United States)

    Federal Laboratory Consortium — The Energetics Conditioning Facility is used for long term and short term aging studies of energetic materials. The facility has 10 conditioning chambers of which 2...

  5. MxCuBE: a synchrotron beamline control environment customized for macromolecular crystallography experiments

    International Nuclear Information System (INIS)

    Gabadinho, José; Beteva, Antonia; Guijarro, Matias; Rey-Bakaikoa, Vicente; Spruce, Darren

    2010-01-01

    MxCuBE is a beamline control environment optimized for the needs of macromolecular crystallography. This paper describes the design of the software and the features that MxCuBE currently provides. The design and features of a beamline control software system for macromolecular crystallography (MX) experiments developed at the European Synchrotron Radiation Facility (ESRF) are described. This system, MxCuBE, allows users to easily and simply interact with beamline hardware components and provides automated routines for common tasks in the operation of a synchrotron beamline dedicated to experiments in MX. Additional functionality is provided through intuitive interfaces that enable the assessment of the diffraction characteristics of samples, experiment planning, automatic data collection and the on-line collection and analysis of X-ray emission spectra. The software can be run in a tandem client-server mode that allows for remote control and relevant experimental parameters and results are automatically logged in a relational database, ISPyB. MxCuBE is modular, flexible and extensible and is currently deployed on eight macromolecular crystallography beamlines at the ESRF. Additionally, the software is installed at MAX-lab beamline I911-3 and at BESSY beamline BL14.1

  6. In-situ complex with by-product HCl and release chloride ions to dissolve aramid.

    Science.gov (United States)

    Dai, Yu; Cheng, Zheng; Yuan, Yihao; Meng, Chenbo; Qin, Jiaqiang; Liu, Xiangyang

    2018-06-20

    Because of the strong hydrogen-bond interaction among macromolecular chains, addition of chloride salts is generally needed to offer Cl- ions for dissolution of aromatic polyamides. In this paper, poly-(benzimidazole-terephthalamide) which complexed with by-product HCl during polymerization (PABI-HCl) was prepared and imidazole compound as cosolvent was added into dimethylacetamide (DMAc) to dissolve PABI-HCl. Due to stronger affinity to protons, imidazole compound could in-situ complex with HCl of PABI-HCl and form imidazolium hydrochloride. Then imidazolium hydrochloride would ionize and produce much free Cl- ions which acted as stronger hydrogen-bond acceptor to disrupt interaction among macromolecular chains. As a result, solubility of PABI-HCl in DMAc was improved significantly in existence of small amount of imidazole compound. Moreover, DMAc-imidazole mixture was utlized for synthesis of different kinds of aramids and no precipitation was observed with progress of the reaction. So the mixture was suitable to be utlized as solvent for polymerization of aramid. © 2018 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  7. Investigation of structural materials of reactors using high-energy heavy-ion irradiations

    International Nuclear Information System (INIS)

    Wang Zhiguang

    2007-01-01

    Radiation damage in structural materials of fission/fusion reactors is mainly attributed to the evolution of intensive atom displacement damage induced by energetic particles (n, α and/or fission fragments) and high-rate helium doping by direct α particle bombardments and/or (n, α) reactions. It can cause severe degradation of reactor structural materials such as surface blistering, bulk void swelling, deformation, fatigue, embrittlement, stress erosion corrosion and so on that will significantly affect the operation safety of reactors. However, up to now, behavior of structural materials at the end of their service can hardly be fully tested in a real reactor. In the present work, damage process in reactor structural materials is briefly introduced, then the advantages of energetic ion implantation/irradiation especially high-energy heavy ion irradiation are discussed, and several typical examples on simulation of radiation effects in reactor candidate structural materials using high-energy heavy ion irradiations are pronounced. Experimental results and theoretical analysis suggested that irradiation with energetic particles especially high-energy heavy ions is very useful technique for simulating the evolution of microstructures and macro-properties of reactor structural materials. Furthermore, an on-going plan of material irradiation experiments using high energy H- and He-ions based on the Heavy Ion Research Facilities in Lanzhou (HIRFL) is also briefly interpreted. (authors)

  8. Enzymes as Green Catalysts for Precision Macromolecular Synthesis.

    Science.gov (United States)

    Shoda, Shin-ichiro; Uyama, Hiroshi; Kadokawa, Jun-ichi; Kimura, Shunsaku; Kobayashi, Shiro

    2016-02-24

    The present article comprehensively reviews the macromolecular synthesis using enzymes as catalysts. Among the six main classes of enzymes, the three classes, oxidoreductases, transferases, and hydrolases, have been employed as catalysts for the in vitro macromolecular synthesis and modification reactions. Appropriate design of reaction including monomer and enzyme catalyst produces macromolecules with precisely controlled structure, similarly as in vivo enzymatic reactions. The reaction controls the product structure with respect to substrate selectivity, chemo-selectivity, regio-selectivity, stereoselectivity, and choro-selectivity. Oxidoreductases catalyze various oxidation polymerizations of aromatic compounds as well as vinyl polymerizations. Transferases are effective catalysts for producing polysaccharide having a variety of structure and polyesters. Hydrolases catalyzing the bond-cleaving of macromolecules in vivo, catalyze the reverse reaction for bond forming in vitro to give various polysaccharides and functionalized polyesters. The enzymatic polymerizations allowed the first in vitro synthesis of natural polysaccharides having complicated structures like cellulose, amylose, xylan, chitin, hyaluronan, and chondroitin. These polymerizations are "green" with several respects; nontoxicity of enzyme, high catalyst efficiency, selective reactions under mild conditions using green solvents and renewable starting materials, and producing minimal byproducts. Thus, the enzymatic polymerization is desirable for the environment and contributes to "green polymer chemistry" for maintaining sustainable society.

  9. Atomic force microscopy applied to study macromolecular content of embedded biological material

    Energy Technology Data Exchange (ETDEWEB)

    Matsko, Nadejda B. [Electron Microscopy Centre, Institute of Applied Physics, HPM C 15.1, ETH-Hoenggerberg, CH-8093, Zurich (Switzerland)]. E-mail: matsko@iap.phys.ethz.ch

    2007-02-15

    We demonstrate that atomic force microscopy represents a powerful tool for the estimation of structural preservation of biological samples embedded in epoxy resin, in terms of their macromolecular distribution and architecture. The comparison of atomic force microscopy (AFM) and transmission electron microscopy (TEM) images of a biosample (Caenorhabditis elegans) prepared following to different types of freeze-substitution protocols (conventional OsO{sub 4} fixation, epoxy fixation) led to the conclusion that high TEM stainability of the sample results from a low macromolecular density of the cellular matrix. We propose a novel procedure aimed to obtain AFM and TEM images of the same particular organelle, which strongly facilitates AFM image interpretation and reveals new ultrastructural aspects (mainly protein arrangement) of a biosample in addition to TEM data.

  10. Effect of macromolecular crowding on the rate of diffusion-limited ...

    Indian Academy of Sciences (India)

    The enzymatic reaction rate has been shown to be affected by the presence of such macromolecules. A simple numerical model is proposed here based on percolation and diffusion in disordered systems to study the effect of macromolecular crowding on the enzymatic reaction rates. The model qualitatively explains some ...

  11. Nitriding of Ti substrate using energetic ions from plasma focus device

    International Nuclear Information System (INIS)

    Henriquez, A; Bhuyan, H; Favre, M; Bora, B; Wyndham, E; Chuaqui, H; Mändl, S; Gerlach, J W; Manova, D

    2012-01-01

    Plasma Focus (PF) discharge is a pulsed plasma producing discharge that generates high temperature and high density plasma for a short duration. PF devices are known to emit intense ion beams pulses of characteristic energy in the keV to a few MeV range, in a time scale of tens of nanoseconds. We have previously investigated the ion flux and energy spectrum of ion beams emitted from a low energy PF, operating at 20 kV, with 1.8 kJ stored energy. It was observed that the ion beams have wide range of energy and intensity spectra with a clear angular anisotropy. Due to the wide range of ion energy and intensity spectra PF has become a subject of current interest for its applications in material sciences including surface modification and thin film deposition. The purpose of this study is the formation of titanium nitride (TiN) thin film and to investigate the structural properties of the TiN thin films in terms of PF angular positions. Substrates like Ti and Ti/Si were nitrided in a 1.8 kJ PF device at different angular positions with respect to the PF axis in order to correlate their surface properties with ion beam parameters. Preliminary characterizations of the ion implanted substrates have been conducted, using SEM, EDX and XRD. Our results indicate the formation of nanocrystalline TiN thin film only in certain angular positions. Angular dependency of the surface morphology was observed, which shows that the surface features strongly depends on ion beam energy and flux. With increasing angular positions, a reduction in the deposition rate and the sputter rate is observed. A pronounced nanostructured surface is only observed at the axis of the pinched plasma column, indicating the dominant role of sputtering and perhaps melting and fast re-crystallization of the surface in creating the nanostructures.

  12. Source Regions of the Interplanetary Magnetic Field and Variability in Heavy-Ion Elemental Composition in Gradual Solar Energetic Particle Events

    Science.gov (United States)

    Ko, Yuan-Kuen; Tylka, Allan J.; Ng, Chee K.; Wang, Yi-Ming; Dietrich, William F.

    2013-01-01

    Gradual solar energetic particle (SEP) events are those in which ions are accelerated to their observed energies by interactions with a shock driven by a fast coronal mass-ejection (CME). Previous studies have shown that much of the observed event-to-event variability can be understood in terms of shock speed and evolution in the shock-normal angle. But an equally important factor, particularly for the elemental composition, is the origin of the suprathermal seed particles upon which the shock acts. To tackle this issue, we (1) use observed solar-wind speed, magnetograms, and the PFSS model to map the Sun-L1 interplanetary magnetic field (IMF) line back to its source region on the Sun at the time of the SEP observations; and (2) then look for correlation between SEP composition (as measured by Wind and ACE at approx. 2-30 MeV/nucleon) and characteristics of the identified IMF-source regions. The study is based on 24 SEP events, identified as a statistically-significant increase in approx. 20 MeV protons and occurring in 1998 and 2003-2006, when the rate of newly-emergent solar magnetic flux and CMEs was lower than in solar-maximum years and the field-line tracing is therefore more likely to be successful. We find that the gradual SEP Fe/O is correlated with the field strength at the IMF-source, with the largest enhancements occurring when the footpoint field is strong, due to the nearby presence of an active region. In these cases, other elemental ratios show a strong charge-to-mass (q/M) ordering, at least on average, similar to that found in impulsive events. These results lead us to suggest that magnetic reconnection in footpoint regions near active regions bias the heavy-ion composition of suprathermal seed ions by processes qualitatively similar to those that produce larger heavy-ion enhancements in impulsive SEP events. To address potential technical concerns about our analysis, we also discuss efforts to exclude impulsive SEP events from our event sample.

  13. New Paradigm for Macromolecular Crystallography Experiments at SSRL: Automated Crystal Screening And Remote Data Collection

    International Nuclear Information System (INIS)

    Soltis, S.M.; Cohen, A.E.; Deacon, A.; Eriksson, T.; Gonzalez, A.; McPhillips, S.; Chui, H.; Dunten, P.; Hollenbeck, M.; Mathews, I.; Miller, M.; Moorhead, P.; Phizackerley, R.P.; Smith, C.; Song, J.; Bedem, H. van dem; Ellis, P.; Kuhn, P.; McPhillips, T.; Sauter, N.; Sharp, K.

    2009-01-01

    Complete automation of the macromolecular crystallography experiment has been achieved at Stanford Synchrotron Radiation Lightsource (SSRL) through the combination of robust mechanized experimental hardware and a flexible control system with an intuitive user interface. These highly reliable systems have enabled crystallography experiments to be carried out from the researchers' home institutions and other remote locations while retaining complete control over even the most challenging systems. A breakthrough component of the system, the Stanford Auto-Mounter (SAM), has enabled the efficient mounting of cryocooled samples without human intervention. Taking advantage of this automation, researchers have successfully screened more than 200 000 samples to select the crystals with the best diffraction quality for data collection as well as to determine optimal crystallization and cryocooling conditions. These systems, which have been deployed on all SSRL macromolecular crystallography beamlines and several beamlines worldwide, are used by more than 80 research groups in remote locations, establishing a new paradigm for macromolecular crystallography experimentation.

  14. In Vitro and In Vivo Evaluation of Microparticulate Drug Delivery Systems Composed of Macromolecular Prodrugs

    Directory of Open Access Journals (Sweden)

    Yoshiharu Machida

    2008-08-01

    Full Text Available Macromolecular prodrugs are very useful systems for achieving controlled drug release and drug targeting. In particular, various macromolecule-antitumor drug conjugates enhance the effectiveness and improve the toxic side effects. Also, polymeric micro- and nanoparticles have been actively examined and their in vivo behaviors elucidated, and it has been realized that their particle characteristics are very useful to control drug behavior. Recently, researches based on the combination of the concepts of macromolecular prodrugs and micro- or nanoparticles have been reported, although they are limited. Macromolecular prodrugs enable drugs to be released at a certain controlled release rate based on the features of the macromolecule-drug linkage. Micro- and nanoparticles can control in vivo behavior based on their size, surface charge and surface structure. These merits are expected for systems produced by the combination of each concept. In this review, several micro- or nanoparticles composed of macromolecule-drug conjugates are described for their preparation, in vitro properties and/or in vivo behavior.

  15. Multipoint Observations of Energetic Particle Injections and Substorm Activity During a Conjunction Between Magnetospheric Multiscale (MMS) and Van Allen Probes

    Science.gov (United States)

    Turner, D. L.; Fennell, J. F.; Blake, J. B.; Claudepierre, S. G.; Clemmons, J. H.; Jaynes, A. N.; Leonard, T.; Baker, D. N.; Cohen, I. J.; Gkioulidou, M.; Ukhorskiy, A. Y.; Mauk, B. H.; Gabrielse, C.; Angelopoulos, V.; Strangeway, R. J.; Kletzing, C. A.; Le Contel, O.; Spence, H. E.; Torbert, R. B.; Burch, J. L.; Reeves, G. D.

    2017-11-01

    This study examines multipoint observations during a conjunction between Magnetospheric Multiscale (MMS) and Van Allen Probes on 7 April 2016 in which a series of energetic particle injections occurred. With complementary data from Time History of Events and Macroscale Interactions during Substorms, Geotail, and Los Alamos National Laboratory spacecraft in geosynchronous orbit (16 spacecraft in total), we develop new insights on the nature of energetic particle injections associated with substorm activity. Despite this case involving only weak substorm activity (maximum AE energy wave activity is also established from Van Allen Probes and MMS. Drift mapping using a simplified magnetic field model provides estimates of the dispersionless injection boundary locations as a function of universal time, magnetic local time, and L shell. The analysis reveals that at least five electron injections, which were localized in magnetic local time, preceded a larger injection of both electrons and ions across nearly the entire nightside of the magnetosphere near geosynchronous orbit. The larger ion and electron injection did not penetrate to L < 6.6, but several of the smaller electron injections penetrated to L < 6.6. Due to the discrepancy between the number, penetration depth, and complexity of electron versus ion injections, this event presents challenges to the current conceptual models of energetic particle injections.

  16. Impulsive ion acceleration in earth's outer magnetosphere

    International Nuclear Information System (INIS)

    Baker, D.N.; Belian, R.D.

    1985-01-01

    Considerable observational evidence is found that ions are accelerated to high energies in the outer magnetosphere during geomagnetic disturbances. The acceleration often appears to be quite impulsive causing temporally brief (10's of seconds), very intense bursts of ions in the distant plasma sheet as well as in the near-tail region. These ion bursts extend in energy from 10's of keV to over 1 MeV and are closely associated with substorm expansive phase onsets. Although the very energetic ions are not of dominant importance for magnetotail plasma dynamics, they serve as an important tracer population. Their absolute intensity and brief temporal appearance bespeaks a strong and rapid acceleration process in the near-tail, very probably involving large induced electric fields substantially greater than those associated with cross-tail potential drops. Subsequent to their impulsive acceleration, these ions are injected into the outer trapping regions forming ion ''drift echo'' events, as well as streaming tailward away from their acceleration site in the near-earth plasma sheet. Most auroral ion acceleration processes occur (or are greatly enhanced) during the time that these global magnetospheric events are occurring in the magnetotail. A qualitative model relating energetic ion populations to near-tail magnetic reconnection at substorm onset followed by global redistribution is quite successful in explaining the primary observational features. Recent measurements of the elemental composition and charge-states have proven valuable for showing the source (solar wind or ionosphere) of the original plasma population from which the ions were accelerated

  17. Homogenization Theory for the Prediction of Obstructed Solute Diffusivity in Macromolecular Solutions.

    Science.gov (United States)

    Donovan, Preston; Chehreghanianzabi, Yasaman; Rathinam, Muruhan; Zustiak, Silviya Petrova

    2016-01-01

    The study of diffusion in macromolecular solutions is important in many biomedical applications such as separations, drug delivery, and cell encapsulation, and key for many biological processes such as protein assembly and interstitial transport. Not surprisingly, multiple models for the a-priori prediction of diffusion in macromolecular environments have been proposed. However, most models include parameters that are not readily measurable, are specific to the polymer-solute-solvent system, or are fitted and do not have a physical meaning. Here, for the first time, we develop a homogenization theory framework for the prediction of effective solute diffusivity in macromolecular environments based on physical parameters that are easily measurable and not specific to the macromolecule-solute-solvent system. Homogenization theory is useful for situations where knowledge of fine-scale parameters is used to predict bulk system behavior. As a first approximation, we focus on a model where the solute is subjected to obstructed diffusion via stationary spherical obstacles. We find that the homogenization theory results agree well with computationally more expensive Monte Carlo simulations. Moreover, the homogenization theory agrees with effective diffusivities of a solute in dilute and semi-dilute polymer solutions measured using fluorescence correlation spectroscopy. Lastly, we provide a mathematical formula for the effective diffusivity in terms of a non-dimensional and easily measurable geometric system parameter.

  18. Homogenization Theory for the Prediction of Obstructed Solute Diffusivity in Macromolecular Solutions.

    Directory of Open Access Journals (Sweden)

    Preston Donovan

    Full Text Available The study of diffusion in macromolecular solutions is important in many biomedical applications such as separations, drug delivery, and cell encapsulation, and key for many biological processes such as protein assembly and interstitial transport. Not surprisingly, multiple models for the a-priori prediction of diffusion in macromolecular environments have been proposed. However, most models include parameters that are not readily measurable, are specific to the polymer-solute-solvent system, or are fitted and do not have a physical meaning. Here, for the first time, we develop a homogenization theory framework for the prediction of effective solute diffusivity in macromolecular environments based on physical parameters that are easily measurable and not specific to the macromolecule-solute-solvent system. Homogenization theory is useful for situations where knowledge of fine-scale parameters is used to predict bulk system behavior. As a first approximation, we focus on a model where the solute is subjected to obstructed diffusion via stationary spherical obstacles. We find that the homogenization theory results agree well with computationally more expensive Monte Carlo simulations. Moreover, the homogenization theory agrees with effective diffusivities of a solute in dilute and semi-dilute polymer solutions measured using fluorescence correlation spectroscopy. Lastly, we provide a mathematical formula for the effective diffusivity in terms of a non-dimensional and easily measurable geometric system parameter.

  19. Counterstreaming-ion-tokamak fissile breeder

    International Nuclear Information System (INIS)

    Jassby, D.L.; Lee, J.D.

    1976-08-01

    Tokamak plasmas fueled and heated by energetic neutral-atom beams are characterized by total ion energy greatly exceeding the electron energy. For smaller devices the largest fusion reactivity of energetic-ion plasmas is obtained when oppositely injected D 0 and T 0 beams sustain counterstreaming velocity distributions of deuterons and tritons. This scoping study investigates the net fissile and power productions of a tokamak fusion-fission reactor with a counterstreaming-ion fusion driver and a fertile blanket optimized for fissile breeding. The fusion driver has parameters R/sub o/ = 4.7 m, a = 1.0 m, B/sub t/ = 5.6 T, W/sub b/ = 100 keV (D 0 ), n tau/sub E/ = 1.4 x 10 13 cm -3 s, Q = 1.5, 14-MeV neutron production = 175 MW. The blanket contains a fast-fission zone of natural U plus Mo (7 percent), followed by a Li-bearing zone for T breeding. The reactor produces a net power of 480 MWe and supplies sufficient Pu to support a system of LWR's producing 3800 MWe, with an estimated electrical energy cost for the entire system of 27 mills/kWh

  20. PRIGo: a new multi-axis goniometer for macromolecular crystallography

    Energy Technology Data Exchange (ETDEWEB)

    Waltersperger, Sandro; Olieric, Vincent, E-mail: vincent.olieric@psi.ch; Pradervand, Claude [Paul Scherrer Institute, Villigen PSI (Switzerland); Glettig, Wayne [Centre Suisse d’Electronique et Microtechnique SA, Neuchâtel 2002 (Switzerland); Salathe, Marco; Fuchs, Martin R.; Curtin, Adrian; Wang, Xiaoqiang; Ebner, Simon; Panepucci, Ezequiel; Weinert, Tobias [Paul Scherrer Institute, Villigen PSI (Switzerland); Schulze-Briese, Clemens [Dectris Ltd, Baden 5400 (Switzerland); Wang, Meitian, E-mail: vincent.olieric@psi.ch [Paul Scherrer Institute, Villigen PSI (Switzerland)

    2015-05-09

    The design and performance of the new multi-axis goniometer PRIGo developed at the Swiss Light Source at Paul Scherrer Institute is described. The Parallel Robotics Inspired Goniometer (PRIGo) is a novel compact and high-precision goniometer providing an alternative to (mini-)kappa, traditional three-circle goniometers and Eulerian cradles used for sample reorientation in macromolecular crystallography. Based on a combination of serial and parallel kinematics, PRIGo emulates an arc. It is mounted on an air-bearing stage for rotation around ω and consists of four linear positioners working synchronously to achieve x, y, z translations and χ rotation (0–90°), followed by a ϕ stage (0–360°) for rotation around the sample holder axis. Owing to the use of piezo linear positioners and active correction, PRIGo features spheres of confusion of <1 µm, <7 µm and <10 µm for ω, χ and ϕ, respectively, and is therefore very well suited for micro-crystallography. PRIGo enables optimal strategies for both native and experimental phasing crystallographic data collection. Herein, PRIGo hardware and software, its calibration, as well as applications in macromolecular crystallography are described.

  1. Progress in rational methods of cryoprotection in macromolecular crystallography

    International Nuclear Information System (INIS)

    Alcorn, Thomas; Juers, Douglas H.

    2010-01-01

    Measurements of the average thermal contractions (294→72 K) of 26 different cryosolutions are presented and discussed in conjunction with other recent advances in the rational design of protocols for cryogenic cooling in macromolecular crystallography. Cryogenic cooling of macromolecular crystals is commonly used for X-ray data collection both to reduce crystal damage from radiation and to gather functional information by cryogenically trapping intermediates. However, the cooling process can damage the crystals. Limiting cooling-induced crystal damage often requires cryoprotection strategies, which can involve substantial screening of solution conditions and cooling protocols. Here, recent developments directed towards rational methods for cryoprotection are described. Crystal damage is described in the context of the temperature response of the crystal as a thermodynamic system. As such, the internal and external parts of the crystal typically have different cryoprotection requirements. A key physical parameter, the thermal contraction, of 26 different cryoprotective solutions was measured between 294 and 72 K. The range of contractions was 2–13%, with the more polar cryosolutions contracting less. The potential uses of these results in the development of cryocooling conditions, as well as recent developments in determining minimum cryosolution soaking times, are discussed

  2. Ion induced high energy electron emission from copper

    International Nuclear Information System (INIS)

    Ruano, G.; Ferron, J.

    2008-01-01

    We present measurements of secondary electron emission from Cu induced by low energy bombardment (1-5 keV) of noble gas (He + , Ne + and Ar + ) and Li + ions. We identify different potential and kinetic mechanisms and find the presence of high energetic secondary electrons for a couple of ion-target combinations. In order to understand the presence of these fast electrons we need to consider the Fermi shuttle mechanism and the different ion neutralization efficiencies.

  3. Cooperative interaction of hydronium ion with an ethereally fenced hexaarylbenzene-based receptor: an NMR and theoretical study

    Czech Academy of Sciences Publication Activity Database

    Kříž, Jaroslav; Toman, Petr; Makrlík, E.; Budka, J.; Shukla, R.; Rathore, R.

    2010-01-01

    Roč. 114, č. 16 (2010), s. 5327-5334 ISSN 1089-5639 R&D Projects: GA ČR GA203/09/1478 Institutional research plan: CEZ:AV0Z40500505 Keywords : aromatic proton receptor * hydronium ions * complex exchange dynamics Subject RIV: CD - Macromolecular Chemistry Impact factor: 2.732, year: 2010

  4. Collagen macromolecular drug delivery systems

    International Nuclear Information System (INIS)

    Gilbert, D.L.

    1988-01-01

    The objective of this study was to examine collagen for use as a macromolecular drug delivery system by determining the mechanism of release through a matrix. Collagen membranes varying in porosity, crosslinking density, structure and crosslinker were fabricated. Collagen characterized by infrared spectroscopy and solution viscosity was determined to be pure and native. The collagen membranes were determined to possess native vs. non-native quaternary structure and porous vs. dense aggregate membranes by electron microscopy. Collagen monolithic devices containing a model macromolecule (inulin) were fabricated. In vitro release rates were found to be linear with respect to t 1/2 and were affected by crosslinking density, crosslinker and structure. The biodegradation of the collagen matrix was also examined. In vivo biocompatibility, degradation and 14 C-inulin release rates were evaluated subcutaneously in rats

  5. Thermodynamics of Macromolecular Association in Heterogeneous Crowding Environments: Theoretical and Simulation Studies with a Simplified Model.

    Science.gov (United States)

    Ando, Tadashi; Yu, Isseki; Feig, Michael; Sugita, Yuji

    2016-11-23

    The cytoplasm of a cell is crowded with many different kinds of macromolecules. The macromolecular crowding affects the thermodynamics and kinetics of biological reactions in a living cell, such as protein folding, association, and diffusion. Theoretical and simulation studies using simplified models focus on the essential features of the crowding effects and provide a basis for analyzing experimental data. In most of the previous studies on the crowding effects, a uniform crowder size is assumed, which is in contrast to the inhomogeneous size distribution of macromolecules in a living cell. Here, we evaluate the free energy changes upon macromolecular association in a cell-like inhomogeneous crowding system via a theory of hard-sphere fluids and free energy calculations using Brownian dynamics trajectories. The inhomogeneous crowding model based on 41 different types of macromolecules represented by spheres with different radii mimics the physiological concentrations of macromolecules in the cytoplasm of Mycoplasma genitalium. The free energy changes of macromolecular association evaluated by the theory and simulations were in good agreement with each other. The crowder size distribution affects both specific and nonspecific molecular associations, suggesting that not only the volume fraction but also the size distribution of macromolecules are important factors for evaluating in vivo crowding effects. This study relates in vitro experiments on macromolecular crowding to in vivo crowding effects by using the theory of hard-sphere fluids with crowder-size heterogeneity.

  6. Variable effects of soman on macromolecular secretion by ferret trachea

    International Nuclear Information System (INIS)

    McBride, R.K.; Zwierzynski, D.J.; Stone, K.K.; Culp, D.J.; Marin, M.G.

    1991-01-01

    The purpose of this study was to examine the effect of the anticholinesterase agent, soman, on macromolecular secretion by ferret trachea, in vitro. We mounted pieces of ferret trachea in Ussing-type chambers. Secreted sulfated macromolecules were radiolabeled by adding 500 microCi of 35 SO 4 to the submucosal medium and incubating for 17 hr. Soman added to the submucosal side produced a concentration-dependent increase in radiolabeled macromolecular release with a maximal secretory response (mean +/- SD) of 202 +/- 125% (n = 8) relative to the basal secretion rate at a concentration of 10 - 7 M. The addition of either 10 -6 M pralidoxime (acetylcholinesterase reactivator) or 10 -6 M atropine blocked the response to 10 -7 M soman. At soman concentrations greater than 10 -7 M, secretion rate decreased and was not significantly different from basal secretion. Additional experiments utilizing acetylcholine and the acetylcholinesterase inhibitor, physostigmine, suggest that inhibition of secretion by high concentrations of soman may be due to a secondary antagonistic effect of soman on muscarinic receptors

  7. Data Management System at the Photon Factory Macromolecular Crystallography Beamline

    International Nuclear Information System (INIS)

    Yamada, Y; Matsugaki, N; Chavas, L M G; Hiraki, M; Igarashi, N; Wakatsuki, S

    2013-01-01

    Macromolecular crystallography is a very powerful tool to investigate three-dimensional structures of macromolecules at the atomic level, and is widely spread among structural biology researchers. Due to recent upgrades of the macromolecular crystallography beamlines at the Photon Factory, beamline throughput has improved, allowing more experiments to be conducted during a user's beam time. Although the number of beamlines has increased, so has the number of beam time applications. Consequently, both the experimental data from users' experiments and data derived from beamline operations have dramatically increased, causing difficulties in organizing these diverse and large amounts of data for the beamline operation staff and users. To overcome this problem, we have developed a data management system by introducing commercial middleware, which consists of a controller, database, and web servers. We have prepared several database projects using this system. Each project is dedicated to a certain aspect such as experimental results, beam time applications, beam time schedule, or beamline operation reports. Then we designed a scheme to link all the database projects.

  8. Heterogeneous ion-exchange polyethylene-based membranes with sulfonated poly(1,4-phenylene sulfide) particles

    Czech Academy of Sciences Publication Activity Database

    Schauer, Jan; Brožová, Libuše; Pientka, Zbyněk; Bouzek, K.

    2006-01-01

    Roč. 200, 1-3 (2006), s. 632-633 ISSN 0011-9164. [Conference Euromembrane. Giardini Naxos - Taormina, 24.09.2006-28.09.2006] R&D Projects: GA ČR GA203/05/0080 Institutional research plan: CEZ:AV0Z40500505 Keywords : ion-exchange membrane * poly(phenylene sulfide) * fuel cell Subject RIV: CD - Macromolecular Chemistry Impact factor: 0.917, year: 2006

  9. Ion induced high energy electron emission from copper

    Energy Technology Data Exchange (ETDEWEB)

    Ruano, G. [Instituto de Desarrollo Tecnologico para la Industria Quimica, Consejo Nacional de Investigaciones Cientificas y Tecnicas and Universidad Nacional del Litoral Gueemes 3450 CC 91, 3000 Santa Fe (Argentina)], E-mail: gdruano@ceride.gov.ar; Ferron, J. [Instituto de Desarrollo Tecnologico para la Industria Quimica, Consejo Nacional de Investigaciones Cientificas y Tecnicas and Universidad Nacional del Litoral Gueemes 3450 CC 91, 3000 Santa Fe (Argentina); Departamento de Ingenieria de Materiales, Facultad de Ingenieria Quimica, Consejo Nacional de Investigaciones Cientificas y Tecnicas and Universidad Nacional del Litoral Gueemes 3450 CC 91, 3000 Santa Fe (Argentina)

    2008-11-15

    We present measurements of secondary electron emission from Cu induced by low energy bombardment (1-5 keV) of noble gas (He{sup +}, Ne{sup +} and Ar{sup +}) and Li{sup +} ions. We identify different potential and kinetic mechanisms and find the presence of high energetic secondary electrons for a couple of ion-target combinations. In order to understand the presence of these fast electrons we need to consider the Fermi shuttle mechanism and the different ion neutralization efficiencies.

  10. Scattering of energetic ions by solids: a simulation

    International Nuclear Information System (INIS)

    Pearce, J.G.; Shaar, Z.; Crosbie, R.E.

    1977-01-01

    Digital computer simulation of an experiment is described which measures the energy-intensity distribution of noble gas ions scattered by crystalline solids. The discussion emphasizes the simulation techniques employed (in particular, the choice of integration method), the methods of relating computer input data to the experimental variables, and the transformation of computer results into a form directly comparable to experimental data

  11. Energetic heavy ions overcome tumor radioresistance caused by overexpression of Bcl-2

    International Nuclear Information System (INIS)

    Hamada, Nobuyuki; Hara, Takamitsu; Omura-Minamisawa, Motoko; Funayama, Tomoo; Sakashita, Tetsuya; Sora, Sakura; Yokota, Yuichiro; Nakano, Takashi

    2008-01-01

    Background and purpose: Overexpression of Bcl-2 is frequent in human cancers and has been associated with radioresistance. Here we investigated the potential impact of heavy ions on Bcl-2 overexpressing tumors. Materials and methods: Bcl-2 cells (Bcl-2 overexpressing HeLa cells) and Neo cells (neomycin resistant gene-expressing HeLa cells) exposed to γ-rays or heavy ions were assessed for the clonogenic survival, apoptosis and cell cycle distribution. Results: Whereas Bcl-2 cells were more resistant to γ-rays (0.2 keV/μm) and helium ions (16.2 keV/μm) than Neo cells, heavy ions (76.3-1610 keV/μm) yielded similar survival regardless of Bcl-2 overexpression. Carbon ions (108 keV/μm) decreased the difference in the apoptotic incidence between Bcl-2 and Neo cells, and prolonged G 2 /M arrest that occurred more extensively in Bcl-2 cells than in Neo cells. Conclusions: High-LET heavy ions overcome tumor radioresistance caused by Bcl-2 overexpression, which may be explained at least in part by the enhanced apoptotic response and prolonged G 2 /M arrest. Thus, heavy-ion therapy may be a promising modality for Bcl-2 overexpressing radioresistant tumors

  12. Resonant interaction of energetic ions with Alfven-like perturbations in stellarators

    International Nuclear Information System (INIS)

    Karulin, N.; Wobig, H.

    1994-04-01

    The modification of passing guiding center orbits of 3.5 MeV alpha particles and 45 keV protons in the presence of global Alfven eigenmodes (GAE's) is studied in modular advanced stellarators. It is found that if resonances between particles and waves occur, drift surfaces form a set of island structures. The mode numbers of the perturbations, which are dangerous for the energetic particle confinement, are discussed for two particular stellarators (Helias reactor and Wendelstein 7-AS). The perturbation amplitudes corresponding to the onset of orbit stochasticity are studied numerically. The coefficient of the collisionless stochastic diffusion is estimated using the island width derived analytically. (orig.)

  13. To the problem on a charge state of energetic ions of radiation belts

    International Nuclear Information System (INIS)

    Panasyuk, M.I.

    1980-01-01

    Estimation of the effect of recharging processes upon formation of intensity maxima of radiation belt ions of different types is obtained as well as the ion charge states in the area of intensity maxima. Comparison of spatial position of intensity maxima of the H, He, C, O ions with the energies more than 1 MeV with the calculation results is presented. It provides the particle radial drift under the effect of sudden impulses and death at the expence of ionization losses. Application of adiabaticity criterion of the particle movement to the analysis of position of outer edge of radiation belt of heavy ions permitted to carry out estimation of the He, C, O ion charge state. He ions with the energy more than 1 MeV possess mainly the charge state of +2, C and O ions with the energy of several MeV over L=5-6 are in the ionized state almost completely, and during the drift into the depth of the belts the ion charge decreases to 3-4 over L approximately 3.5 with the energy increase. At the energies higher than several MeV the recharge processes are significant for the C and.O ions. For He ions with the energy higher 1 MeV and for H ions with more than 0.1 MeV the recharge role is not considerable

  14. Numerical Study of Instabilities Driven by Energetic Neutral Beam Ions in NSTX

    International Nuclear Information System (INIS)

    Belova, E.V.; Gorelenkov, N.N.; Cheng, C.Z.; Fredrickson, E.D.

    2003-01-01

    Recent experimental observations from NSTX [National Spherical Torus Experiment] suggest that many modes in a subcyclotron frequency range are excited during neutral-beam injection (NBI). These modes have been identified as Compressional Alfven Eigenmodes (CAEs) and Global Alfven Eigenmodes (GAEs), which are driven unstable through the Doppler-shifted cyclotron resonance with the beam ions. The injection velocities of the NBI ions in NSTX are large compared to Alfven velocity, V(sub)0 > 3V(sub)A, and a strong anisotropy in the fast-ion pitch-angle distribution provides the energy source for the instabilities. Recent interest in the excitation of Alfven Eigenmodes in the frequency range omega less than or approximately equal to omega(sub)ci, where omega(sub)ci is the ion cyclotron frequency, is related to the possibility that these modes can provide a mechanism for direct energy transfer from super-Alfvenic beam ions to thermal ions. Numerical simulations are required in order to find a self-consistent mode structure, and to include the effects of finite-Larmor radius (FLR), the nonlinear effects, and the thermal plasma kinetic effects

  15. Modeling the multi-scale mechanisms of macromolecular resource allocation

    DEFF Research Database (Denmark)

    Yang, Laurence; Yurkovich, James T; King, Zachary A

    2018-01-01

    As microbes face changing environments, they dynamically allocate macromolecular resources to produce a particular phenotypic state. Broad 'omics' data sets have revealed several interesting phenomena regarding how the proteome is allocated under differing conditions, but the functional consequen...... and detail how mathematical models have aided in our understanding of these processes. Ultimately, such modeling efforts have helped elucidate the principles of proteome allocation and hold promise for further discovery....

  16. Electrical initiation of an energetic nanolaminate film

    Science.gov (United States)

    Tringe, Joseph W.; Gash, Alexander E.; Barbee, Jr., Troy W.

    2010-03-30

    A heating apparatus comprising an energetic nanolaminate film that produces heat when initiated, a power source that provides an electric current, and a control that initiates the energetic nanolaminate film by directing the electric current to the energetic nanolaminate film and joule heating the energetic nanolaminate film to an initiation temperature. Also a method of heating comprising providing an energetic nanolaminate film that produces heat when initiated, and initiating the energetic nanolaminate film by directing an electric current to the energetic nanolaminate film and joule heating the energetic nanolaminate film to an initiation temperature.

  17. Pi sampling: a methodical and flexible approach to initial macromolecular crystallization screening

    International Nuclear Information System (INIS)

    Gorrec, Fabrice; Palmer, Colin M.; Lebon, Guillaume; Warne, Tony

    2011-01-01

    Pi sampling, derived from the incomplete factorial approach, is an effort to maximize the diversity of macromolecular crystallization conditions and to facilitate the preparation of 96-condition initial screens. The Pi sampling method is derived from the incomplete factorial approach to macromolecular crystallization screen design. The resulting ‘Pi screens’ have a modular distribution of a given set of up to 36 stock solutions. Maximally diverse conditions can be produced by taking into account the properties of the chemicals used in the formulation and the concentrations of the corresponding solutions. The Pi sampling method has been implemented in a web-based application that generates screen formulations and recipes. It is particularly adapted to screens consisting of 96 different conditions. The flexibility and efficiency of Pi sampling is demonstrated by the crystallization of soluble proteins and of an integral membrane-protein sample

  18. Enhancements of energetic particles near the heliospheric termination shock.

    Science.gov (United States)

    McDonald, Frank B; Stone, Edward C; Cummings, Alan C; Heikkila, Bryant; Lal, Nand; Webber, William R

    2003-11-06

    The spacecraft Voyager 1 is at a distance greater than 85 au from the Sun, in the vicinity of the termination shock that marks the abrupt slowing of the supersonic solar wind and the beginning of the extended and unexplored distant heliosphere. This shock is expected to accelerate 'anomalous cosmic rays', as well as to re-accelerate Galactic cosmic rays and low-energy particles from the inner Solar System. Here we report a significant increase in the numbers of energetic ions and electrons that persisted for seven months beginning in mid-2002. This increase differs from any previously observed in that there was a simultaneous increase in Galactic cosmic ray ions and electrons, anomalous cosmic rays and low-energy ions. The low-intensity level and spectral energy distribution of the anomalous cosmic rays, however, indicates that Voyager 1 still has not reached the termination shock. Rather, the observed increase is an expected precursor event. We argue that the radial anisotropy of the cosmic rays is expected to be small in the foreshock region, as is observed.

  19. Implantation of energetic D{sup +} ions into carbon dioxide ices and implications for our solar system: formation of D{sub 2}O and D{sub 2}CO{sub 3}

    Energy Technology Data Exchange (ETDEWEB)

    Bennett, Chris J.; Ennis, Courtney P.; Kaiser, Ralf I., E-mail: ralfk@hawaii.edu [Department of Chemistry, University of Hawai' i at Mānoa, Honolulu, HI 96822 (United States)

    2014-10-10

    Carbon dioxide (CO{sub 2}) ices were irradiated with energetic D{sup +} ions to simulate the exposure of oxygen-bearing solar system ices to energetic protons from the solar wind and magnetospheric sources. The formation of species was observed online and in situ by exploiting FTIR spectroscopy. Molecular products include ozone (O{sub 3}), carbon oxides (CO{sub 3}(C {sub 2v}, D {sub 3h}), CO{sub 4}, CO{sub 5}, CO{sub 6}), D2-water (D{sub 2}O), and D2-carbonic acid (D{sub 2}CO{sub 3}). Species released into the gas phase were sampled via a quadrupole mass spectrometer, and possible minor contributions from D2-formaldehyde (D{sub 2}CO), D4-methanol (CD{sub 3}OD), and D2-formic acid (DCOOD) were additionally identified. The feasibility of several reaction networks was investigated by determining their ability to fit the observed temporal column densities of 10 key species that were quantified during the irradiation period. Directly relevant to the CO{sub 2}-bearing ices of comets, icy satellites in the outer solar system, and the ice caps on Mars, this work illustrates for the first time that D2-water is formed as a product of the exposure of CO{sub 2} ices to D{sup +} ions. These findings provide strong support for water formation from oxygen-bearing materials via non-thermal hydrogen atoms, and predict reaction pathways that are likely to be unfolding on the surfaces of asteroids and the Moon.

  20. Electrochemical properties of ion implanted silicon

    International Nuclear Information System (INIS)

    Pham minh Tan.

    1979-11-01

    The electrochemical behaviour of ion implanted silicon in contact with hydrofluoric acid solution was investigated. It was shown that the implanted layer on silicon changes profoundly its electrochemical properties (photopotential, interface impedance, rest potential, corrosion, current-potential behaviour, anodic dissolution of silicon, redox reaction). These changes depend strongly on the implantation parameters such as ion dose, ion energy, thermal treatment and ion mass and are weakly dependent on the chemical nature of the implantation ion. The experimental results were evaluated and interpreted in terms of the semiconductor electrochemical concepts taking into account the interaction of energetic ions with the solid surface. The observed effects are thus attributed to the implantation induced damage of silicon lattice and can be used for profiling of the implanted layer and the electrochemical treatment of the silicon surface. (author)

  1. Low and high dose rate heavy ion radiation-induced intestinal and colonic tumorigenesis in APC1638N/+ mice

    Science.gov (United States)

    Suman, Shubhankar; Kumar, Santosh; Moon, Bo-Hyun; Fornace, Albert J.; Datta, Kamal

    2017-05-01

    Ionizing radiation (IR) is a recognized risk factor for colorectal cancer (CRC) and astronauts undertaking long duration space missions are expected to receive IR doses in excess of permissible limits with implications for colorectal carcinogenesis. Exposure to IR in outer space occurs at low doses and dose rates, and energetic heavy ions due to their high linear energy transfer (high-LET) characteristics remain a major concern for CRC risk in astronauts. Previously, we have demonstrated that intestinal tumorigenesis in a mouse model (APC1638N/+) of human colorectal cancer was significantly higher after exposure to high dose rate energetic heavy ions relative to low-LET γ radiation. The purpose of the current study was to compare intestinal tumorigenesis in APC1638N/+ mice after exposure to energetic heavy ions at high (50 cGy/min) and relatively low (0.33 cGy/min) dose rate. Male and female mice (6-8 weeks old) were exposed to either 10 or 50 cGy of 28Si (energy: 300 MeV/n; LET: 70 keV/μm) or 56Fe (energy: 1000 MeV/n; LET: 148 keV/μm) ions at NASA Space Radiation Laboratory in Brookhaven National Laboratory. Mice (n = 20 mice/group) were euthanized and intestinal and colon tumor frequency and size were counted 150 days after radiation exposure. Intestinal tumorigenesis in male mice exposed to 56Fe was similar for high and low dose rate exposures. Although male mice showed a decreasing trend at low dose rate relative to high dose rate exposures, the differences in tumor frequency between the two types of exposures were not statistically significant after 28Si radiation. In female mice, intestinal tumor frequency was similar for both radiation type and dose rates tested. In both male and female mice intestinal tumor size was not different after high and low dose rate radiation exposures. Colon tumor frequency in male and female mice after high and low dose rate energetic heavy ions was also not significantly different. In conclusion, intestinal and colonic tumor

  2. Mono-energetic ions emission by nanosecond laser solid target irradiation

    Energy Technology Data Exchange (ETDEWEB)

    Muoio, A., E-mail: Annamaria.Muoio@lns.infn.it [Istituto Nazionale di Fisica Nucleare – Laboratori Nazionali del Sud, Via S. Sofia 62, 95123 Catania (Italy); Dipartimento di Fisica e Scienze della Terra, Università degli Studi di Messina, Viale F.S. D’Alcontres 31, 98166 Messina (Italy); Tudisco, S. [Istituto Nazionale di Fisica Nucleare – Laboratori Nazionali del Sud, Via S. Sofia 62, 95123 Catania (Italy); Altana, C. [Istituto Nazionale di Fisica Nucleare – Laboratori Nazionali del Sud, Via S. Sofia 62, 95123 Catania (Italy); Dipartimento di Fisica e Astronomia, Università degli Studi di Catania, Via S. Sofia 64, 95123 Catania (Italy); Lanzalone, G. [Istituto Nazionale di Fisica Nucleare – Laboratori Nazionali del Sud, Via S. Sofia 62, 95123 Catania (Italy); Università degli Studi di Enna “Kore”, Via delle Olimpiadi, 94100 Enna (Italy); Mascali, D.; Cirrone, G.A.P.; Schillaci, F. [Istituto Nazionale di Fisica Nucleare – Laboratori Nazionali del Sud, Via S. Sofia 62, 95123 Catania (Italy); Trifirò, A. [Dipartimento di Fisica e Scienze della Terra, Università degli Studi di Messina, Viale F.S. D’Alcontres 31, 98166 Messina (Italy); Sezione INFN, Catania (Italy)

    2016-09-01

    An experimental campaign aiming to investigate the acceleration mechanisms through laser–matter interaction in nanosecond domain has been carried out at the LENS (Laser Energy for Nuclear Science) laboratory of INFN-LNS, Catania. Pure Al targets were irradiated by 6 ns laser pulses at different pumping energies, up to 2 J. Advanced diagnostics tools were used to characterize the plasma plume and ion production. We show the preliminary results of this experimental campaign, and especially the ones showing the production of multicharged ions having very narrow energy spreads.

  3. Fast ion stabilization of the ion temperature gradient driven modes in the Joint European Torus hybrid-scenario plasmas: a trigger mechanism for internal transport barrier formation

    Energy Technology Data Exchange (ETDEWEB)

    Romanelli, M; Zocco, A [Euratom/CCFE Fusion Association, Culham Science Centre, Abingdon, Oxon, OX14 3DB (United Kingdom); Crisanti, F, E-mail: Michele.Romanelli@ccfe.ac.u [Associazione Euratom-ENEA sulla Fusione, C.R. Frascati, Frascati (Italy)

    2010-04-15

    Understanding and modelling turbulent transport in thermonuclear fusion plasmas are crucial for designing and optimizing the operational scenarios of future fusion reactors. In this context, plasmas exhibiting state transitions, such as the formation of an internal transport barrier (ITB), are particularly interesting since they can shed light on transport physics and offer the opportunity to test different turbulence suppression models. In this paper, we focus on the modelling of ITB formation in the Joint European Torus (JET) [1] hybrid-scenario plasmas, where, due to the monotonic safety factor profile, magnetic shear stabilization cannot be invoked to explain the transition. The turbulence suppression mechanism investigated here relies on the increase in the plasma pressure gradient in the presence of a minority of energetic ions. Microstability analysis of the ion temperature gradient driven modes (ITG) in the presence of a fast-hydrogen minority shows that energetic ions accelerated by the ion cyclotron resonance heating (ICRH) system (hydrogen, n{sub H,fast}/n{sub D,thermal} up to 10%, T{sub H,fast}/T{sub D,thermal} up to 30) can increase the pressure gradient enough to stabilize the ITG modes driven by the gradient of the thermal ions (deuterium). Numerical analysis shows that, by increasing the temperature of the energetic ions, electrostatic ITG modes are gradually replaced by nearly electrostatic modes with tearing parity at progressively longer wavelengths. The growth rate of the microtearing modes is found to be lower than that of the ITG modes and comparable to the local E x B-velocity shearing rate. The above mechanism is proposed as a possible trigger for the formation of ITBs in this type of discharges.

  4. Sources and acceleration efficiencies for energetic particles in the heliosphere

    International Nuclear Information System (INIS)

    Kucharek, H; Moebius, E

    2006-01-01

    Shocks at solar wind stream interaction regions, coronal mass ejections and magnetospheric obstacles have long been known for their intimate link with particle acceleration. Much enhanced capabilities to determine mass and charge composition at interplanetary shocks with ACE and SOHO have enabled us to identify sources and acceleration processes for the energetic particles. Both solar wind and interstellar pickup ions are substantial sources for particle acceleration in corotating interaction regions and at coronal mass ejections driven shocks and that flare particles are re-accelerated. Suprathermal distributions, such as pickup ions and pre-existing flare populations are accelerated much more efficiently than particles out of the solar wind. Recent results of the termination shock crossing by Voyager I and the scientific goals of the upcoming IBEX mission will be discussed

  5. Physics with fast molecular-ion beams

    International Nuclear Information System (INIS)

    Kanter, E.P.

    1980-01-01

    Fast (MeV) molecular-ion beams provide a unique source of energetic projectile nuclei which are correlated in space and time. The recognition of this property has prompted several recent investigations of various aspects of the interactions of these ions with matter. High-resolution measurements on the fragments resulting from these interactions have already yielded a wealth of new information on such diverse topics as plasma oscillations in solids and stereochemical structures of molecular ions as well as a variety of atomic collision phenomena. The general features of several such experiments will be discussed and recent results will be presented

  6. Ion acceleration at the earth's bow shock: A review of observations in the upstream region

    International Nuclear Information System (INIS)

    Gosling, J.T.; Asbridge, J.R.; Bame, S.J.; Feldman, W.C.

    1979-01-01

    Positive ions are accelerated at or near the earth's bow shock and propagate into the upstream region. Two distinctly different population of these ions, distinguished by their greatly different spectral and angular widths, can be identified there. The type of ion population observed in the upstream region is strongly correlated with the presence or absence of long-period compresive waves in the solar wind. Very few ions are accelerated in the vicinity of the shock to energies much above about 100 keV. It is not yet clear whether the most energetic ions (i.e. those near 100 keV) are accelerated at the shock or in the broad disturbed region upstream from the shock. In either case stochastic acceleration by turbulent electrostatic fields seems to be the most viable candidate for the acceleration of the most energetic particles

  7. Ion acceleration at the earth's bow shock: a review of observations in the upstream region

    International Nuclear Information System (INIS)

    Gosling, J.T.; Asbridge, J.R.; Bame, S.J.; Feldman, W.C.

    1979-01-01

    Positive ions are accelerated at or near the earth's bow shock and propagate into the upstream region. Two distinctly different populations of these ions, distinguished by their greatly different spectral and angular widths, can be identified there. The type of ion population observed in the upstream region is strongly correlated with the presence or absence of long-period compressive waves in the solar wind. Very few ions are accelerated in the vicinity of the shock to energies much above about 100 keV. It is not yet clear whether the most energetic ions (i.e., those near 100 keV) are accelerated at the shock or in broad disturbed region upstream from the shock. In either case stochastic acceleration by turbulent electrostatic fields seems to be the most viable candidate for the acceleration of the most energetic particles

  8. The effect of a single blade limiter on energetic neutral beam particles in Doublet III

    International Nuclear Information System (INIS)

    Petrie, T.W.; Armentrout, C.; Burrell, K.H.; Hino, T.; Kahn, C.; Kim, J.; Lohr, J.; Rottler, L.; Schissel, D.; St John, H.

    1984-01-01

    Energetic beam ion collisions with the main limiter can be a significant power loss process under certain operating conditions in Doublet III. Futhermore, these collisions may cause measurable damage to the limiter itself. Under low current and low toroidal field conditions (e.g., Isub(p) = 290 kA and Bsub(T) = 6.3 kG), 20-38% of the inferred absorbed beam power may be deposited directly on the ion drift side of the limiter by the beam ions. However, for higher plasma current and toroidal fields (e.g., Isub(p) = 480 kA and Bsub(t) = 15 kG), the fraction of inferred absorbed beam power deposited on the limiter is reduced to < 10%. Monte Carlo code simulations show that this loss of beam power is primarily a result of the large poloidal and toroidal gyro-orbits of the energetic beam ions. Other factors which may enhance beam ion losses to the limiter are (1) large separation distances between the primary limiter and the (outboard) vacuum vessel wall, and (2) plasma density buildup near the plasma edge during high gas puff operation. In addition, our data suggests enhanced plasma density and recycling near the limiter. This localized density can cause appreciable premature ionizations of the incoming beam neutrals and thus reduce the effective plasma heating of the beamline which is immediately upcurrent of the limiter. The prematurely-ionized beam particles from this adjacent beamline are responsible for much of the damage to the ion drift side of the limiter. We have found that under certain operating conditions (1) the direct beam heating of the limiter is 50% greater and (2) the stored plasma energy is 10% less when the beamline immediately upcurrent of the limiter heats the plasma. Thus, the relative positions of the limiters to the beamlines are important in designing future tokamaks. (orig.)

  9. Collisionless shock formation and the prompt acceleration of solar flare ions

    Science.gov (United States)

    Cargill, P. J.; Goodrich, C. C.; Vlahos, L.

    1988-01-01

    The formation mechanisms of collisionless shocks in solar flare plasmas are investigated. The priamry flare energy release is assumed to arise in the coronal portion of a flare loop as many small regions or 'hot spots' where the plasma beta locally exceeds unity. One dimensional hybrid numerical simulations show that the expansion of these 'hot spots' in a direction either perpendicular or oblique to the ambient magnetic field gives rise to collisionless shocks in a few Omega(i), where Omega(i) is the local ion cyclotron frequency. For solar parameters, this is less than 1 second. The local shocks are then subsequently able to accelerate particles to 10 MeV in less than 1 second by a combined drift-diffusive process. The formation mechanism may also give rise to energetic ions of 100 keV in the shock vicinity. The presence of these energetic ions is due either to ion heating or ion beam instabilities and they may act as a seed population for further acceleration. The prompt acceleration of ions inferred from the Gamma Ray Spectrometer on the Solar Maximum Mission can thus be explained by this mechanism.

  10. Ab initio research of stopping power for energetic ions in solids

    Energy Technology Data Exchange (ETDEWEB)

    He, Bin, E-mail: hebin-rc@163.com; Meng, Xu-Jun; Wang, Jian-Guo

    2017-03-01

    A new physical scenario is suggested to estimate the stopping power of energetic α particles in solid-density Be, Na, and Al at room temperature in an ab initio way based on the average atom model. In the scenario the stopping power is caused by the transition of free electrons to higher energy states and the ionization of bound electrons of the atom. Our results are found generally in good agreement with the recommended data in Al, Be and Na as well as the experimental data in Al. A comparison of energy loss with the recent experiment of protons in Be indicates that the scenario is more reasonable than the local density approximation in this case.

  11. Functionalization of Planet-Satellite Nanostructures Revealed by Nanoscopic Localization of Distinct Macromolecular Species

    KAUST Repository

    Rossner, Christian; Roddatis, Vladimir; Lopatin, Sergei; Vana, Philipp

    2016-01-01

    The development of a straightforward method is reported to form hybrid polymer/gold planet-satellite nanostructures (PlSNs) with functional polymer. Polyacrylate type polymer with benzyl chloride in its backbone as a macromolecular tracer

  12. About Russian nuclear energetic perspectives

    International Nuclear Information System (INIS)

    Laletin, N.I.

    2003-01-01

    My particular view about Russian nuclear energetics perspectives is presented. The nearest and the further perspectives are considered. The arguments are adduced that the most probable scenario of nuclear energetic development is its stabilization in the near future. Fur further development the arguments of supporters and opponents of nuclear energetics are analyzed. Three points of view are considered. The first point of view that there is not alternative for nuclear energetics. My notes are the following ones. a) I express a skeptic opinion about a statement of quick exhaustion of fossil organic fuel recourses and corresponding estimations are presented. b) It is expressed skeptic opinion about the statement that nuclear energetics can have a visual influence on ''steam effect''. c) I agree that nuclear energetics is the most ecological technology for normal work but however we can't disregard possibilities of catastrophic accidents. The second point of view that the use of nuclear energetics can't have the justification. I adduce the arguments contrary to this statement. The third point of view that nuclear energetics is a usual technology and the only criteria for discussions about what dimension and where one ought develop it is total cost of its unit. Expressed an opinion that the deceived for the choose of a way the skill of the estimate correctly and optimized so named the external parts of the unit energy costs for different energy technologies. (author)

  13. Thiomers for oral delivery of hydrophilic macromolecular drugs.

    Science.gov (United States)

    Bernkop-Schnürch, Andreas; Hoffer, Martin H; Kafedjiiski, Krum

    2004-11-01

    In recent years thiolated polymers (thiomers) have appeared as a promising new tool in oral drug delivery. Thiomers are obtained by the immobilisation of thio-bearing ligands to mucoadhesive polymeric excipients. By the formation of disulfide bonds with mucus glycoproteins, the mucoadhesive properties of thiomers are up to 130-fold improved compared with the corresponding unmodified polymers. Owing to the formation of inter- and intramolecular disulfide bonds within the thiomer itself, matrix tablets and particulate delivery systems show strong cohesive properties, resulting in comparatively higher stability, prolonged disintegration times and a more controlled drug release. The permeation of hydrophilic macromolecular drugs through the gastrointestinal (GI) mucosa can be improved by the use of thiomers. Furthermore, some thiomers exhibit improved inhibitory properties towards GI peptidases. The efficacy of thiomers in oral drug delivery has been demonstrated by various in vivo studies. A pharmacological efficacy of 1%, for example, was achieved in rats by oral administration of calcitonin tablets comprising a thiomer. Furthermore, tablets comprising a thiomer and pegylated insulin resulted in a pharmacological efficacy of 7% after oral application to diabetic mice. Low-molecular-weight heparin embedded in thiolated polycarbophil led to an absolute bioavailability of > or = 20% after oral administration to rats. In these studies, formulations comprising the corresponding unmodified polymer had only a marginal or no effect. These results indicate drug carrier systems based on thiomers appear to be a promising tool for oral delivery of hydrophilic macromolecular drugs.

  14. ISPyB: an information management system for synchrotron macromolecular crystallography.

    Science.gov (United States)

    Delagenière, Solange; Brenchereau, Patrice; Launer, Ludovic; Ashton, Alun W; Leal, Ricardo; Veyrier, Stéphanie; Gabadinho, José; Gordon, Elspeth J; Jones, Samuel D; Levik, Karl Erik; McSweeney, Seán M; Monaco, Stéphanie; Nanao, Max; Spruce, Darren; Svensson, Olof; Walsh, Martin A; Leonard, Gordon A

    2011-11-15

    Individual research groups now analyze thousands of samples per year at synchrotron macromolecular crystallography (MX) resources. The efficient management of experimental data is thus essential if the best possible experiments are to be performed and the best possible data used in downstream processes in structure determination pipelines. Information System for Protein crystallography Beamlines (ISPyB), a Laboratory Information Management System (LIMS) with an underlying data model allowing for the integration of analyses down-stream of the data collection experiment was developed to facilitate such data management. ISPyB is now a multisite, generic LIMS for synchrotron-based MX experiments. Its initial functionality has been enhanced to include improved sample tracking and reporting of experimental protocols, the direct ranking of the diffraction characteristics of individual samples and the archiving of raw data and results from ancillary experiments and post-experiment data processing protocols. This latter feature paves the way for ISPyB to play a central role in future macromolecular structure solution pipelines and validates the application of the approach used in ISPyB to other experimental techniques, such as biological solution Small Angle X-ray Scattering and spectroscopy, which have similar sample tracking and data handling requirements.

  15. Ion-atom interactions probed by photofragment spectroscopy

    International Nuclear Information System (INIS)

    Helm, H.

    1984-01-01

    Photofragment spectroscopy studies energetic and dynamical properties of molecular states interacting with dissociation continuum. So far, data for eighteen diatomic molecular ions have been gathered by this technique. This paper is a review of these investigations, introduced by a discussion of the experimental methods used. The wealth of information accessible by ion photofragment spectroscopy challenges the experimentalist in the application of innovative techniques and the theoretician for less approximate accounts of the Hamiltonian. (Auth.)

  16. Macromolecular systems for vaccine delivery.

    Science.gov (United States)

    MuŽíková, G; Laga, R

    2016-10-20

    Vaccines have helped considerably in eliminating some life-threatening infectious diseases in past two hundred years. Recently, human medicine has focused on vaccination against some of the world's most common infectious diseases (AIDS, malaria, tuberculosis, etc.), and vaccination is also gaining popularity in the treatment of cancer or autoimmune diseases. The major limitation of current vaccines lies in their poor ability to generate a sufficient level of protective antibodies and T cell responses against diseases such as HIV, malaria, tuberculosis and cancers. Among the promising vaccination systems that could improve the potency of weakly immunogenic vaccines belong macromolecular carriers (water soluble polymers, polymer particels, micelles, gels etc.) conjugated with antigens and immunistumulatory molecules. The size, architecture, and the composition of the high molecular-weight carrier can significantly improve the vaccine efficiency. This review includes the most recently developed (bio)polymer-based vaccines reported in the literature.

  17. Integral Transport Analysis Results for Ions Flowing Through Neutral Gas

    Science.gov (United States)

    Emmert, Gilbert; Santarius, John

    2017-10-01

    Results of a computational model for the flow of energetic ions and neutrals through a background neutral gas will be presented. The method models reactions as creating a new source of ions or neutrals if the energy or charge state of the resulting particle is changed. For a given source boundary condition, the creation and annihilation of the various species is formulated as a 1-D Volterra integral equation that can quickly be solved numerically by finite differences. The present work focuses on multiple-pass, 1-D ion flow through neutral gas and a nearly transparent, concentric anode and cathode pair in spherical, cylindrical, or linear geometry. This has been implemented as a computer code for atomic (3He, 3He +, 3He + +) and molecular (D, D2, D-, D +, D2 +, D3 +) ion and neutral species, and applied to modeling inertial-electrostatic connement (IEC) devices. The code yields detailed energy spectra of the various ions and energetic neutral species. Calculations for several University of Wisconsin IEC and ion implantation devices will be presented. Research supported by US Dept. of Homeland Security Grant 2015-DN-077-ARI095, Dept. of Energy Grant DE-FG02-04ER54745, and the Grainger Foundation.

  18. Analysis of the energetic sector through the national energetic matrix

    International Nuclear Information System (INIS)

    Garzon Lozano, Enrique

    2007-01-01

    The author shows the results of the national energetic balance 1975-2005, through the energetic matrix of the country, giving an annual growth of 5.1% in this period of offer of primary energy, where the mineral coal participates with 9,6%, the hydraulic energy with 4,8%, natural gas with 4,2%, trash with 2,4% and petroleum with 2,2%, while the firewood fell in 0,5%

  19. Insatured polymeric thin film formation by energetic ions irradiations of fluoropolymers

    International Nuclear Information System (INIS)

    Le Moel, A.; Duraud, J.P.; Darnez, C.

    1987-03-01

    This work deals with the study of both structural and electronic modifications of polyvinyldene fluoride (PVDF) by monochromatised X-ray photoemission spectroscopy (XPS). Monochromatised XPS has been used to follow the surface modifications of PVDF samples subjected to various levels of irradiations (oxygen ions: 800 MeV, krypton ions: 3600 MeV). Desorption of hydrogen fluoride molecules and the creation of cumulene compounds are observed. 46 refs

  20. Ion Beam Propulsion Study

    Science.gov (United States)

    2008-01-01

    The Ion Beam Propulsion Study was a joint high-level study between the Applied Physics Laboratory operated by NASA and ASRC Aerospace at Kennedy Space Center, Florida, and Berkeley Scientific, Berkeley, California. The results were promising and suggested that work should continue if future funding becomes available. The application of ion thrusters for spacecraft propulsion is limited to quite modest ion sources with similarly modest ion beam parameters because of the mass penalty associated with the ion source and its power supply system. Also, the ion source technology has not been able to provide very high-power ion beams. Small ion beam propulsion systems were used with considerable success. Ion propulsion systems brought into practice use an onboard ion source to form an energetic ion beam, typically Xe+ ions, as the propellant. Such systems were used for steering and correction of telecommunication satellites and as the main thruster for the Deep Space 1 demonstration mission. In recent years, "giant" ion sources were developed for the controlled-fusion research effort worldwide, with beam parameters many orders of magnitude greater than the tiny ones of conventional space thruster application. The advent of such huge ion beam sources and the need for advanced propulsion systems for exploration of the solar system suggest a fresh look at ion beam propulsion, now with the giant fusion sources in mind.

  1. Quantum effects on the coulomb logarithm for energetic ions during the initial thermalization phase

    CERN Document Server

    Deng Bai Quan; Deng Mei Gen; Peng Li Lin

    2002-01-01

    The authors have discussed the quantum mechanical effects for the energetic charged particles produced in D-He sup 3 fusion reactions. Authors' results show that it is better to use the proper Coulomb logarithm at the high-energy end in describing the thermalization process, because the quantum mechanical effects on the Coulomb logarithm are not negligible, based on an assumption of binary collision

  2. Electrons with continuous energy distribution from energetic heavy ion collisions

    International Nuclear Information System (INIS)

    Berenyi, D.

    1984-01-01

    The properties and origin of continuous electron spectrum emitted in high energy heavy ion collisions are reviewed. The basic processes causing the characteristic regions of the continuous spectrum are described. The contribution of electrons ejected from the target and from the projectile are investigated in detail in the cases of light and heavy projectiles. The recently recognized mechanisms, electron-capture-to-continuum (ECC) and electron-loss-to-continuum (ELC), leading to a cusp in forward direction, and their theoretical interpretations are discussed. The importance of data from ion-atom collisions in the field of atomic physics and in applications are briefly summarized. (D.Gy)

  3. High energy ion hit technique to local area using microbeam

    Energy Technology Data Exchange (ETDEWEB)

    Tanaka, Ryuichi; Kamiya, Tomihiro; Suda, Tamotsu; Sakai, Takuro; Hirao, Toshio; Kobayashi, Yasuhiko; Watanabe, Hiroshi [Japan Atomic Energy Research Inst., Takasaki, Gunma (Japan). Takasaki Radiation Chemistry Research Establishment

    1997-03-01

    Single energetic ion hit technique has been developed as an application of ion microbeam technique, in order to study the effect of local damage or injury to materials and living organisms. The overall performance is basically defined by those of separate techniques: microbeam formation, microbeam positioning, single ion detection, detection signal processing, hit timing control, and hit verification. Recent progress on the developments of these techniques at JAERI-TIARA facility are reviewed. (author)

  4. The contrasting effect of macromolecular crowding on amyloid fibril formation.

    Directory of Open Access Journals (Sweden)

    Qian Ma

    Full Text Available Amyloid fibrils associated with neurodegenerative diseases can be considered biologically relevant failures of cellular quality control mechanisms. It is known that in vivo human Tau protein, human prion protein, and human copper, zinc superoxide dismutase (SOD1 have the tendency to form fibril deposits in a variety of tissues and they are associated with different neurodegenerative diseases, while rabbit prion protein and hen egg white lysozyme do not readily form fibrils and are unlikely to cause neurodegenerative diseases. In this study, we have investigated the contrasting effect of macromolecular crowding on fibril formation of different proteins.As revealed by assays based on thioflavin T binding and turbidity, human Tau fragments, when phosphorylated by glycogen synthase kinase-3β, do not form filaments in the absence of a crowding agent but do form fibrils in the presence of a crowding agent, and the presence of a strong crowding agent dramatically promotes amyloid fibril formation of human prion protein and its two pathogenic mutants E196K and D178N. Such an enhancing effect of macromolecular crowding on fibril formation is also observed for a pathological human SOD1 mutant A4V. On the other hand, rabbit prion protein and hen lysozyme do not form amyloid fibrils when a crowding agent at 300 g/l is used but do form fibrils in the absence of a crowding agent. Furthermore, aggregation of these two proteins is remarkably inhibited by Ficoll 70 and dextran 70 at 200 g/l.We suggest that proteins associated with neurodegenerative diseases are more likely to form amyloid fibrils under crowded conditions than in dilute solutions. By contrast, some of the proteins that are not neurodegenerative disease-associated are unlikely to misfold in crowded physiological environments. A possible explanation for the contrasting effect of macromolecular crowding on these two sets of proteins (amyloidogenic proteins and non-amyloidogenic proteins has been

  5. Interplanetary Magnetic Field Control of the Entry of Solar Energetic Particles into the Magnetosphere

    Science.gov (United States)

    Richard, R. L.; El-Alaoui, M.; Ashour-Abdalla, M.; Walker, R. J.

    2002-01-01

    We have investigated the entry of energetic ions of solar origin into the magnetosphere as a function of the interplanetary magnetic field orientation. We have modeled this entry by following high energy particles (protons and 3 He ions) ranging from 0.1 to 50 MeV in electric and magnetic fields from a global magnetohydrodynamic (MHD) model of the magnetosphere and its interaction with the solar wind. For the most part these particles entered the magnetosphere on or near open field lines except for some above 10 MeV that could enter directly by crossing field lines due to their large gyroradii. The MHD simulation was driven by a series of idealized solar wind and interplanetary magnetic field (IMF) conditions. It was found that the flux of particles in the magnetosphere and transport into the inner magnetosphere varied widely according to the IMF orientation for a constant upstream particle source, with the most efficient entry occurring under southward IMF conditions. The flux inside the magnetosphere could approach that in the solar wind implying that SEPs can contribute significantly to the magnetospheric energetic particle population during typical SEP events depending on the state of the magnetosphere.

  6. Faraday-cup-type lost fast ion detector on Heliotron J

    Energy Technology Data Exchange (ETDEWEB)

    Yamamoto, S., E-mail: yamamoto.satoshi.6n@kyoto-u.ac.jp; Kobayashi, S.; Nagasaki, K.; Okada, H.; Minami, T.; Kado, S.; Ohshima, S.; Weir, G. M.; Konoshima, S.; Mizuuchi, T. [Institute of Advanced Energy, Kyoto University, Gokasho, Uji, Kyoto 611-0011 (Japan); Ogawa, K.; Isobe, M. [National Institute for Fusion Science, National Institutes of Natural Sciences, 322-6 Oroshi, Toki, Gifu 509-5292 (Japan); SOKENDAI (The Graduate University for Advanced Studies), 322-6 Oroshi, Toki, Gifu 509-5292 (Japan); Darrow, D. S. [Princeton Plasma Physics Laboratory, Princeton, New Jersey 08543 (United States); Nakamura, Y.; Ohtani, Y. [Graduate School of Energy Science, Kyoto University, Gokasho, Uji, Kyoto 611-0011 (Japan); Kemmochi, N. [National Institute for Fusion Science, National Institutes of Natural Sciences, 322-6 Oroshi, Toki, Gifu 509-5292 (Japan)

    2016-11-15

    A Faraday-cup type lost-fast ion probe (FLIP) has been designed and installed in Heliotron J for the purpose of the studies of interaction between fast ions and MHD instabilities. The FLIP can measure the co-going fast ions whose energy is in the range of 1.7–42.5 keV (proton) and pitch angle of 90{sup ∘}–140{sup ∘}, especially for fast ions having the injection energy of neutral beam injection (NBI). The FLIP successfully measured the re-entering passing ions and trapped lost-fast ions caused by fast-ion-driven energetic particle modes in NBI heated plasmas.

  7. Mass spectrometric comparison of swift heavy ion-induced and anaerobic thermal degradation of polymers

    Science.gov (United States)

    Lima, V.; Hossain, U. H.; Walbert, T.; Seidl, T.; Ensinger, W.

    2018-03-01

    The study of polymers irradiated by highly energetic ions and the resulting radiation-induced degradation is of major importance for space and particle accelerator applications. The mechanism of ion-induced molecular fragmentation of polyethylene, polyethyleneimine and polyamide was investigated by means of mass spectrometry and infrared spectroscopy. The results show that the introduction of nitrogen and oxygen into the polymer influences the stability rendering aliphatic polymers with heteroatoms less stable. A comparison to thermal decomposition data from literature reveals that ion-induced degradation is different in its bond fracture mechanism. While thermal degradation starts at the weakest bond, which is usually the carbon-heteroatom bond, energetic ion irradiation leads in the first step to scission of all types of bonds creating smaller molecular fragments. This is due to the localized extreme energy input under non-equilibrium conditions when the ions transfer kinetic energy onto electrons. These findings are of relevance for the choice of polymers for long-term application in both space and accelerator facilities.

  8. Ion-materials interactions and their application

    International Nuclear Information System (INIS)

    Whitlow, H.J.

    1998-01-01

    The interaction of energetic ions and other charged particles with solid matter leads to a wealth of physical processes. This thesis comprises a collection of papers and an introductory commentary, which explore some aspects of how these interactions may be used for: (i) Characterisation of thin surface layers of material, (ii) characterisation of energetic charged particles, and (iii) modification of materials by ion bombardment. In (i) Elastic Recoil Detection using a detector system for measurement of Time of Flight and kinetic energy of recoiling target atoms has been developed as a quantitative method for elemental depth profiling of thin (0.5-1 μm) surface layers. This method has been applied to the study of reactions of metal/III-V structures, which are of importance for the semiconductor industry. (ii) MeV-ion - materials interactions have been used as the basis for developing Si p-i-n detectors for the CHICSi programme which will undertake experimental studies of heavy ion collisions at intermediate energies. This involved development and testing of extremely thin (10-12 μm) Si ΔE detectors for characterising light- and intermediate mass charged particles as well as calibration of Si p-i-n detectors and their susceptibility to radiation damage. (iii) Nuclear Reaction Analysis (NRA) with resonant nuclear reactions has been used to study modification of material with ion beams. In the first study, the accumulation of fluorine in BF 2 + ion implanted WSi 2 solid diffusion sources was investigated. The second study investigated if there was a correlation between photoluminescence and segregation of hydrogen to buried heterojunctions in plasma-etched III-V quantum-well structures. The ion bombardment in this case was during etching in an Ar+CH 4 plasma using an Electron Cyclotron Resonance (ECR) source. (author)

  9. Gaseous odd- and even-electron ions

    International Nuclear Information System (INIS)

    Wagner, W.; Heimbach, H.; Levsen, K.

    1980-01-01

    The principal collision-induced fragmentations of simple protonated ketones, aldehydes, ethers, amines, sulphides, alcohols, acids, nitriles and halides are discussed. These protonated molecules decompose mainly by loss of alkane, alkene and RX (R = alkyl, H; X = OH, SH, NH 2 , Br, I). Substantial radical losses are only observed for small protonated molecules. Deuterium-labelling demonstrates that the X-H bond is particularly strong. The fragmentation of (MH) + ions is compared with that of the corresponding (M) + sup(.) ions is compared with that of the corresponding (M) + sup(.) ions. The spectra of the (M) + sup(.) ions are dominated by direct bond cleavages, in particular α-cleavages, as a result of both the stability of the ionic fragment and the loose transition state. In (MH) + ions direct bond cleavages lead to energetically less favourable products. Thus rearrangement reactions play a more important role in the decomposition of these ions. (MH) + ions are more stable relative to fragmentation than (M) + sup(.) ions. (orig.)

  10. Shape manipulation of ion irradiated Ag nanoparticles embedded in lithium niobate

    NARCIS (Netherlands)

    Wolf, S.; Rensberg, J.; Johannes, A.; Thomae, R.; Smit, F.; Neveling, R.; Moodley, M.; Bierschenk, T.; Rodriquez, M.; Afra, B.; Hasan, Shakeeb Bin; Rockstuhl, C.; Ridgway, M.; Bharuth-Ram, K.; Ronning, C.

    2016-01-01

    Spherical silver nanoparticles were prepared by means of ion beam synthesis in lithium niobate. The embedded nanoparticles were then irradiated with energetic 84Kr and 197Au ions, resulting in different electronic energy losses between 8.1 and 27.5 keV nm−1 in the top layer of the samples. Due to

  11. Interplanetary ions during an energetic storm particle event: The distribution function from solar wind thermal energies to 1.6 MeV

    International Nuclear Information System (INIS)

    Gosling, J.T.; Asbridge, J.R.; Bame, S.J.; Feldman, W.C.; Zwickl, R.D.; Paschmann, G.; Sckopke, N.; Hynds, R.J.

    1981-01-01

    Data from the Los Alamos Scientific Laboratory/Max-Planck-Institut fast plasma experiment on Isee 2 have been combined with data from the European Space Agency/Imperial College/Space Research Laboratory low-energy proton experiment on Isee 3 to obtain for the first time an ion velocity distribution function f(v) extending from solar wind energies (-1 keV) to 1.6 MeV during the postshock phase of an energetic storm particle (ESP) event. This study reveals that f(v) of the ESP population is roughly isotropic in the solar wind frame from solar wind thermal energies out to 1.6 MeV. Emerging smoothly out of the solar wind thermal distribution, the ESP f(v) initially falls with increasing energy as E/sup -2.4/ in the solar wind frame. Above about 40 keV no single power law exponent adequately describes the energy dependence of f(v) in the solar wind frame. Above approx.200 keV in both the spacecraft frame and the solar wind frame, f(v) can be described by an exponential in speed (f(v)proportionale/sup -v/v//sub o/) with v/sub o/ = 1.05 x 10 8 cm s -1 . The ESP event studied (August 27, 1978) was superposed upon a more energetic particle event which was predominantly field-aligned and which was probably of solar origin. Our observations suggest that the ESP population is accelerated directly out of the solar wind thermal population or its quiescent suprathermal tail by a stochastic process associated with the shock wave disturbance. The acceleration mechanism is sufficiently efficient that approx.1% of the solar wind population is accelerated to suprathermal energies. These suprathermal particles have an energy density of approx.290 eV cm -3

  12. Polydisulfide Manganese(II) Complexes as Non-Gadolinium Biodegradable Macromolecular MRI Contrast Agents

    Science.gov (United States)

    Ye, Zhen; Jeong, Eun-Kee; Wu, Xueming; Tan, Mingqian; Yin, Shouyu; Lu, Zheng-Rong

    2011-01-01

    Purpose To develop safe and effective manganese(II) based biodegradable macromolecular MRI contrast agents. Materials and Methods In this study, we synthesized and characterized two polydisulfide manganese(II) complexes, Mn-DTPA cystamine copolymers and Mn-EDTA cystamine copolymers, as new biodegradable macromolecular MRI contrast agents. The contrast enhancement of the two manganese based contrast agents were evaluated in mice bearing MDA-MB-231 human breast carcinoma xenografts, in comparison with MnCl2. Results The T1 and T2 relaxivities were 4.74 and 10.38 mM−1s−1 per manganese at 3T for Mn-DTPA cystamine copolymers (Mn=30.50 kDa) and 6.41 and 9.72 mM−1s−1 for Mn-EDTA cystamine copolymers (Mn= 61.80 kDa). Both polydisulfide Mn(II) complexes showed significant liver, myocardium and tumor enhancement. Conclusion The manganese based polydisulfide contrast agents have a potential to be developed as alternative non-gadolinium contrast agents for MR cancer and myocardium imaging. PMID:22031457

  13. Special section containing papers presented at the 13th IAEA Technical Meeting on Energetic Particles in Magnetic Confinement Systems (Beijing, China, 17-20 September 2013) Special section containing papers presented at the 13th IAEA Technical Meeting on Energetic Particles in Magnetic Confinement Systems (Beijing, China, 17-20 September 2013)

    Science.gov (United States)

    Lin, Z.

    2014-10-01

    In magnetic fusion plasmas, a significant fraction of the kinetic pressure is contributed by superthermal charged particles produced by auxiliary heating (fast ions and electrons) and fusion reactions (a-particles). Since these energetic particles are often far away from thermal equilibrium due to their non-Maxwellian distribution and steep pressure gradients, the free energy can excite electromagnetic instabilities to intensity levels well above the thermal fluctuations. The resultant electromagnetic turbulence could induce large transport of energetic particles, which could reduce heating efficiency, degrade overall plasma confinement, and damage fusion devices. Therefore, understanding and predicting energetic particle confinement properties are critical to the success of burning plasma experiments such as ITER since the ignition relies on plasma self-heating by a-particles. To promote international exchanges and collaborations on energetic particle physics, the biannual conference series under the auspices of the International Atomic Energy Agency (IAEA) were help in Kyiv (1989), Aspenas (1991), Trieste (1993), Princeton (1995), JET/Abingdon (1997), Naka (1999), Gothenburg (2001), San Diego (2003), Takayama (2005), Kloster Seeon (2007), Kyiv (2009), and Austin (2011). The papers in this special section were presented at the most recent meeting, the 13th IAEA Technical Meeting on Energetic Particles in Magnetic Confinement Systems, which was hosted by the Fusion Simulation Center, Peking University, Beijing, China (17-20 September 2013). The program of the meeting consisted of 71 presentations, including 13 invited talks, 26 oral contributed talks, 30 posters, and 2 summary talks, which were selected by the International Advisory Committee (IAC). The IAC members include H. Berk, L.G. Eriksson, A. Fasoli, W. Heidbrink, Ya. Kolesnichenko, Ph. Lauber, Z. Lin, R. Nazikian, S. Pinches, S. Sharapov, K. Shinohara, K. Toi, G. Vlad, and X.T. Ding. The conference program

  14. High temporal resolution energetic particle soundings at the magnetopause on November 8, 1977, using ISEE 2

    International Nuclear Information System (INIS)

    Fritz, T.A.; Fahnenstiel, S.C.

    1982-01-01

    We present a detailed analysis of >24 keV ion data obtained from the ISEE 2 satellite on an inbound crossing of the magnetopause at 1130 LT on November 8, 1977, from 0200 to 0330 UT. Based on the technique presented by Williams (1979) of sounding the position of the magnetopause using energetic particle azimuthal asymmetries, we exploit the four second time resolution available on the ISEE 2 satellite to determine the location, structure, orientation, and temporal variation of the magnetopause region. We find that the trapping boundary for energetic ions is sharp and well defined for approx.35 keV ions and that it corresponds most of the time to the time to earthward edge of the plasma boundary layer. Usually magnetosheath plasma penetrated the trapping boundary only up to distances approximately that of the plasma (1 keV) ion gyroradius (approx.100 km). On some occasions magnetosheath-like plasma was observed up to 800 km inside the trapping boundary but these occurrences were usually associated with rapid trapping boundary movement with velocities exceeding 50 km/s. If the trapping boundary determines the position of the last closed field line, the occasional occurrence of magnetosheath plasma deep inside the trapping boundary is inconsistent with accepted merging theories. The determination of the position of the trapping boundary using five separate ion energy channels from 24 to 70 keV was internally consistent for the lowest three channels although the higher energy channels consistently indicated somewhat smaller values. Radial motion was present affecting the position of the trapping boundary on two scales; a wave-like oscillation with a period of approx.105 s superimposed on a larger scale irregular 'breathing' motion. We argue that the wave nature of the trapping boundary was the cause of the slight difference between the higher and lower energy ion trapping boundary locations

  15. Radiation annealing in Ag and Au due to energetic displacement cascades

    International Nuclear Information System (INIS)

    Averback, R.S.; Merkle, K.L.

    1975-01-01

    Radiation annealing due to energetic displacement cascades has been studied in Ag and Au. Thin film specimens, 2500 A, were doped to various concentrations of Frenkel pair defects by irradiating with 150 keV protons at temperatures below 10 K. Subsequently, the specimens were irradiated below 10 K with energetic, approximately 540 keV, self-ions. Electrical resistivity measurements were used to monitor the concentration of defects as a function of dose. In Au, approximately 5 percent of the doped-in Frenkel pairs, annealed during the 540 keV Au irradiation. The annealing volume associated with individual cascades was found to be 2.1 x 10 -16 cm 3 . In Ag approximately 5 percent of the doped-in defects annealed during a 500 keV Ag irradiation and the annealing volume of the cascade was found to be 5 x 10 -16 cm 3 . In addition, the effects of doping concentration and specimen temperature during doping were investigated

  16. Novel highly copper(II)-selective chelating ion exchanger based on poly(glycidyl methacrylate-co-ethylene dimethacrylate) beads modified with aspartic acid derivative

    Czech Academy of Sciences Publication Activity Database

    Horák, Daniel; Beneš, Milan J.; Gumargalieva, K.; Zaikov, G.

    2002-01-01

    Roč. 25, č. 2 (2002), s. 310-314 ISSN 0209-4541 R&D Projects: GA ČR GA203/98/0885 Institutional research plan: CEZ:AV0Z4050913 Keywords : ion exchange resin * CU2+ * selectivity Subject RIV: CD - Macromolecular Chemistry Impact factor: 0.260, year: 2002

  17. Flare energetics

    Science.gov (United States)

    Wu, S. T.; Dejager, C.; Dennis, B. R.; Hudson, H. S.; Simnett, G. M.; Strong, K. T.; Bentley, R. D.; Bornmann, P. L.; Bruner, M. E.; Cargill, P. J.

    1986-01-01

    In this investigation of flare energetics, researchers sought to establish a comprehensive and self-consistent picture of the sources and transport of energy within a flare. To achieve this goal, they chose five flares in 1980 that were well observed with instruments on the Solar Maximum Mission, and with other space-borne and ground-based instruments. The events were chosen to represent various types of flares. Details of the observations available for them and the corresponding physical parameters derived from these data are presented. The flares were studied from two perspectives, the impulsive and gradual phases, and then the results were compared to obtain the overall picture of the energics of these flares. The role that modeling can play in estimating the total energy of a flare when the observationally determined parameters are used as the input to a numerical model is discussed. Finally, a critique of the current understanding of flare energetics and the methods used to determine various energetics terms is outlined, and possible future directions of research in this area are suggested.

  18. The surface topography of Inconel, stainless steel and copper after argon ion bombardment

    International Nuclear Information System (INIS)

    Vogelbruch, K.; Vietzke, E.

    1983-01-01

    Energetic particle bombardment of metals is known to change the surface topography. To simulate the behaviour of the first wall of a fusion device under real plasma conditions, we have investigated the surface topography of rotating targets after 30 keV argon ion bombardment at 70deg incident angle by electron scanning micrographs. Under these conditions Inconel 600, 601, 625, stainless steel, and copper showed no cones, pyramids or cliffs, but only etching figures and at higher ion doses relatively flat hills. Thus, it can be concluded, that the influence of energetic particles on the first wall of a fusion reactor is smaller than expected from the results of such sputtering experiments, which have dealt with the formation of surface structures under ion bombardment at constant incident direction. (author)

  19. In-vacuum long-wavelength macromolecular crystallography.

    Science.gov (United States)

    Wagner, Armin; Duman, Ramona; Henderson, Keith; Mykhaylyk, Vitaliy

    2016-03-01

    Structure solution based on the weak anomalous signal from native (protein and DNA) crystals is increasingly being attempted as part of synchrotron experiments. Maximizing the measurable anomalous signal by collecting diffraction data at longer wavelengths presents a series of technical challenges caused by the increased absorption of X-rays and larger diffraction angles. A new beamline at Diamond Light Source has been built specifically for collecting data at wavelengths beyond the capability of other synchrotron macromolecular crystallography beamlines. Here, the theoretical considerations in support of the long-wavelength beamline are outlined and the in-vacuum design of the endstation is discussed, as well as other hardware features aimed at enhancing the accuracy of the diffraction data. The first commissioning results, representing the first in-vacuum protein structure solution, demonstrate the promising potential of the beamline.

  20. Workshop on algorithms for macromolecular modeling. Final project report, June 1, 1994--May 31, 1995

    Energy Technology Data Exchange (ETDEWEB)

    Leimkuhler, B.; Hermans, J.; Skeel, R.D.

    1995-07-01

    A workshop was held on algorithms and parallel implementations for macromolecular dynamics, protein folding, and structural refinement. This document contains abstracts and brief reports from that workshop.

  1. MR lymphography with macromolecular Gd-DTPA compounds

    International Nuclear Information System (INIS)

    Hamm, B.; Wagner, S.; Branding, G.; Taupitz, M.; Wolf, K.J.

    1990-01-01

    This paper investigates the suitability of macromolecular Gd-DTPA compounds as signal-enhancing lymphographic agents in MR imaging. Two Gd-DTPA polylysin compounds and Gd-DTPA albumin, with molecular weights of 48,000,170,000, and 87,000 daltons, respectively, were tested in rabbits at gadolinium doses of 5 and 15 μmol per animal. Three animals were examined at each dose with T1-weighted sequences. The iliac lymph nodes were imaged prior to and during unilateral endolymphatic infusion into a femoral lymph vessel as well as over a period of 2 hours thereafter. All contrast media showed a homogeneous and pronounced signal enhancement in the lymph nodes during infusion at both doses

  2. High energy argon ion irradiations of polycrystalline iron

    International Nuclear Information System (INIS)

    Dunlop, A.; Lesueur, D.; Lorenzelli, N.; Boulanger, L.

    1986-09-01

    We present here the results of our recent irradiations of polycrystalline iron targets with very energetic (1.76 GeV) Ar ions. The targets consist of piles of thin iron samples, the total thickness of each target being somewhat greater than the theoretical range (450 μm) of the ions. We can thus separate the phenomena which occur at different average energies of the ions and study during the slowing-down process: the different types of induced nuclear reactions. They allow us to determine the experimental range of the ions, the defect profiles in the targets, the structure of the displacement cascades (electron microscopy) and their stability

  3. Ion induced charge collection in GaAs MESFETs

    International Nuclear Information System (INIS)

    Campbell, A.; Knudson, A.; McMorrow, D.; Anderson, W.; Roussos, J.; Espy, S.; Buchner, S.; Kang, K.; Kerns, D.; Kerns, S.

    1989-01-01

    Charge collection measurements on GaAs MESFET test structures demonstrate that more charge can be collected at the gate than is deposited in the active layer and more charge can be collected at the drain than the total amount of charge produced by the ion. Enhanced charge collection at the gate edge is also observed. The current transients produced by the energetic ions have been measured directly with about 20 picosecond resolution

  4. Properties of the ion-ion hybrid resonator in fusion plasmas

    International Nuclear Information System (INIS)

    Morales, George J.

    2015-01-01

    The project developed theoretical and numerical descriptions of the properties of ion-ion hybrid Alfvn resonators that are expected to arise in the operation of a fusion reactor. The methodology and theoretical concepts were successfully compared to observations made in basic experiments in the LAPD device at UCLA. An assessment was made of the excitation of resonator modes by energetic alpha particles for burning plasma conditions expected in the ITER device. The broader impacts included the generation of basic insight useful to magnetic fusion and space science researchers, defining new avenues for exploration in basic laboratory experiments, establishing broader contacts between experimentalists and theoreticians, completion of a Ph.D. dissertation, and promotion of interest in science through community outreach events and classroom instruction.

  5. Linear and nonlinear physics of the magnetoacoustic cyclotron instability of fusion-born ions in relation to ion cyclotron emission

    Energy Technology Data Exchange (ETDEWEB)

    Carbajal, L., E-mail: L.Carbajal-Gomez@warwick.ac.uk; Cook, J. W. S. [Centre for Fusion, Space and Astrophysics, Department of Physics, The University of Warwick, Coventry CV4 7AL (United Kingdom); Dendy, R. O. [EURATOM/CCFE Fusion Association, Culham Science Centre, Abingdon OX14 3DB, Oxfordshire (United Kingdom); Centre for Fusion, Space and Astrophysics, Department of Physics, The University of Warwick, Coventry CV4 7AL (United Kingdom); Chapman, S. C. [Centre for Fusion, Space and Astrophysics, Department of Physics, The University of Warwick, Coventry CV4 7AL (United Kingdom); Department of Mathematics and Statistics, University of Tromsø, N-9037, Tromsø (Norway); Max Planck Institute for the Physics of Complex Systems, D-01187, Dresden (Germany)

    2014-01-15

    The magnetoacoustic cyclotron instability (MCI) probably underlies observations of ion cyclotron emission (ICE) from energetic ion populations in tokamak plasmas, including fusion-born alpha-particles in JET and TFTR [Dendy et al., Nucl. Fusion 35, 1733 (1995)]. ICE is a potential diagnostic for lost alpha-particles in ITER; furthermore, the MCI is representative of a class of collective instabilities, which may result in the partial channelling of the free energy of energetic ions into radiation, and away from collisional heating of the plasma. Deep understanding of the MCI is thus of substantial practical interest for fusion, and the hybrid approximation for the plasma, where ions are treated as particles and electrons as a neutralising massless fluid, offers an attractive way forward. The hybrid simulations presented here access MCI physics that arises on timescales longer than can be addressed by fully kinetic particle-in-cell simulations and by analytical linear theory, which the present simulations largely corroborate. Our results go further than previous studies by entering into the nonlinear stage of the MCI, which shows novel features. These include stronger drive at low cyclotron harmonics, the re-energisation of the alpha-particle population, self-modulation of the phase shift between the electrostatic and electromagnetic components, and coupling between low and high frequency modes of the excited electromagnetic field.

  6. Aging changes of macromolecular synthesis in the mitochondria of mouse hepatocytes as revealed by microscopic radioautography

    Energy Technology Data Exchange (ETDEWEB)

    Nagata, Tetsuji [Shinshu University, Matsumoto (Japan). Dept. of Anatomy and Cell Biology

    2007-07-01

    This mini-review reports aging changes of macromolecular synthesis in the mitochondria of mouse hepatocytes. We have observed the macromolecular synthesis, such as DNA, RNA and proteins, in the mitochondria of various mammalian cells by means of electron microscopic radioautography technique developed in our laboratory. The number of mitochondria per cell, number of labeled mitochondria per cell with 3H-thymidine, 3H-uridine and 3H-leucine, precursors for DNA, RNA and proteins, respectively, were counted and the labeling indices at various ages, from fetal to postnatal early days and several months to 1 and 2 years in senescence, were calculated, which showed variations due to aging. (author)

  7. Heavy ion and hadron reactions in emulsion

    International Nuclear Information System (INIS)

    Otterlund, I.

    1979-04-01

    Recent results from heavy ion and hadron reactions in emulsion are reviewed. General properties of hadron-reaction multiplicities and their correlation to the production of recoiling protons are given. Properties of pseudo-rapidity distributions of shower-particles especially the particle production in the central region of pseudo-rapidity will be discussed. Non-peripheral heavy ion reactions are compared to recent participant-spectator model calculations. Very energetic cosmic ray events will be examined in the light of recent results from hadron-nucleus reactions. (author)

  8. A semi-analytical foreshock model for energetic storm particle events inside 1 AU

    Directory of Open Access Journals (Sweden)

    Vainio Rami

    2014-02-01

    Full Text Available We have constructed a semi-analytical model of the energetic-ion foreshock of a CME-driven coronal/interplanetary shock wave responsible for the acceleration of large solar energetic particle (SEP events. The model is based on the analytical model of diffusive shock acceleration of Bell (1978, appended with a temporal dependence of the cut-off momentum of the energetic particles accelerated at the shock, derived from the theory. Parameters of the model are re-calibrated using a fully time-dependent self-consistent simulation model of the coupled particle acceleration and Alfvén-wave generation upstream of the shock. Our results show that analytical estimates of the cut-off energy resulting from the simplified theory and frequently used in SEP modelling are overestimating the cut-off momentum at the shock by one order magnitude. We show also that the cut-off momentum observed remotely far upstream of the shock (e.g., at 1 AU can be used to infer the properties of the foreshock and the resulting energetic storm particle (ESP event, when the shock is still at small distances from the Sun, unaccessible to the in-situ observations. Our results can be used in ESP event modelling for future missions to the inner heliosphere, like the Solar Orbiter and Solar Probe Plus as well as in developing acceleration models for SEP events in the solar corona.

  9. Surface microhardening by ion implantation

    International Nuclear Information System (INIS)

    Singh, Amarjit

    1986-01-01

    The paper discusses the process and the underlying mechanism of surface microhardening by implanting suitable energetic ions in materials like 4145 steel, 304 stainless steel, aluminium and its 2024-T351 alloy. It has been observed that boron and nitrogen implantation in materials like 4145 steel and 304 stainless steel can produce a significant increase in surface hardness. Moreover the increase can be further enhanced with suitable overlay coatings such as aluminium (Al), Titanium (Ti) and carbon (C). The surface hardening due to implantation is attributed to precipitation hardening or the formation of stable/metastable phase or both. The effect of lithium implantation in aluminium and its alloy on microhardness with increasing ion dose and ion beam energy is also discussed. (author)

  10. Barium ion beam. Annual progress report

    International Nuclear Information System (INIS)

    Lazar, N.; Dandl, R.; Rynn, N.; Wickham, M.

    1985-01-01

    The barium ion beam Zeeman diagnostic is an in situ nonperturbing diagnostic designed to measure both the plasma electric and magnetic fields in devices such as STM and EBT. The diagnostic satisfies the requirements of high precision, spatial resolution and nonperturbation of the plasma. The technique uses resonance absorption of light from a single moded laser in a beam of energetic barium ions to measure the Zeeman effect in the absorption spectrum (to measure changes in the magnetic field) and to observe the changes in beam velocity by the Doppler shift of the absorption lines

  11. Musical Tasks and Energetic Arousal.

    Science.gov (United States)

    Lim, Hayoung A; Watson, Angela L

    2018-03-08

    Music is widely recognized as a motivating stimulus. Investigators have examined the use of music to improve a variety of motivation-related outcomes; however, these studies have focused primarily on passive music listening rather than active participation in musical activities. To examine the influence of participation in musical tasks and unique participant characteristics on energetic arousal. We used a one-way Welch's ANOVA to examine the influence of musical participation (i.e., a non-musical control and four different musical task conditions) upon energetic arousal. In addition, ancillary analyses of participant characteristics including personality, age, gender, sleep, musical training, caffeine, nicotine, and alcohol revealed their possible influence upon pretest and posttest energetic arousal scores. Musical participation yielded a significant relationship with energetic arousal, F(4, 55.62) = 44.38, p = .000, estimated ω2 = 0.60. Games-Howell post hoc pairwise comparisons revealed statistically significant differences between five conditions. Descriptive statistics revealed expected differences between introverts' and extraverts' energetic arousal scores at the pretest, F(1, 115) = 6.80, p = .010, partial η2= .06; however, mean differences failed to reach significance at the posttest following musical task participation. No other measured participant characteristics yielded meaningful results. Passive tasks (i.e., listening to a story or song) were related to decreased energetic arousal, while active musical tasks (i.e., singing, rhythm tapping, and keyboard playing) were related to increased energetic arousal. Musical task participation appeared to have a differential effect for individuals with certain personality traits (i.e., extroverts and introverts).

  12. Ion beam processes in Si

    International Nuclear Information System (INIS)

    Holland, O.W.; Narayan, J.; Fathy, D.

    1984-07-01

    Observation of the effects of implants of energetic ions at high dose rates into Si have produced some exciting and interesting results. The mechanism whereby displacement damage produced by ions self-anneals during high dose rate implantation is discussed. It is shown that ion beam annealing (IBA) offers in certain situations unique possibilities for damage annealing. Annealing results of the near surface in Si with a buried oxide layer, formed by high dose implantation, are presented in order to illustrate the advantages offered by IBA. It is also shown that ion irradiation can stimulate the epitaxial recrystallization of amorphous overlayers in Si. The nonequilibrium alloying which results from such epitaxial processes is discussed as well as mechanisms which limit the solid solubility during irradiation. Finally, a dose rate dependency for the production of stable damage by ion irradiation at a constant fluence has been observed. For low fluence implants, the amount of damage is substantially greater in the case of high flux rather than low flux implantation

  13. Mapping energetics of atom probe evaporation events through first principles calculations.

    Science.gov (United States)

    Peralta, Joaquín; Broderick, Scott R; Rajan, Krishna

    2013-09-01

    The purpose of this work is to use atomistic modeling to determine accurate inputs into the atom probe tomography (APT) reconstruction process. One of these inputs is evaporation field; however, a challenge occurs because single ions and dimers have different evaporation fields. We have calculated the evaporation field of Al and Sc ions and Al-Al and Al-Sc dimers from an L1₂-Al₃Sc surface using ab initio calculations and with a high electric field applied to the surface. The evaporation field is defined as the electric field at which the energy barrier size is calculated as zero, corresponding to the minimum field that atoms from the surface can break their bonds and evaporate from the surface. The evaporation field of the surface atoms are ranked from least to greatest as: Al-Al dimer, Al ion, Sc ion, and Al-Sc dimer. The first principles results were compared with experimental data in the form of an ion evaporation map, which maps multi-ion evaporations. From the ion evaporation map of L1₂-Al₃Sc, we extract relative evaporation fields and identify that an Al-Al dimer has a lower evaporation field than an Al-Sc dimer. Additionally, comparatively an Al-Al surface dimer is more likely to evaporate as a dimer, while an Al-Sc surface dimer is more likely to evaporate as single ions. These conclusions from the experiment agree with the ab initio calculations, validating the use of this approach for modeling APT energetics. Copyright © 2013 Elsevier B.V. All rights reserved.

  14. Alfven eigenmodes driven by Alfvenic beam ions in JT-60U

    International Nuclear Information System (INIS)

    Shinohara, K.; Kusama, Y.; Takechi, M.

    2001-01-01

    Instabilities with frequency chirping in the frequency range of Alfven eigenmodes have been found in the domain 0.1% h > bparallel /υ A ∼ 1 with high energy neutral beam injection in JT-60U. One instability with a frequency inside the Alfven continuum spectrum appears and its frequency increases slowly to the toroidicity induced Alfven eigenmode (TAE) gap on the timescale of an equilibrium change (∼ 200 ms). Other instabilities appear with a frequency inside the TAE gap and their frequencies change very quickly by 10-20 kHz in 1-5 ms. During the period when these fast frequency sweeping (fast FS) modes occur, abrupt large amplitude events (ALEs) often appear with a drop of neutron emission rate and an increase in fast neutral particle fluxes. The loss of energetic ions increases with a peak fluctuation amplitude of B-tilde θ /B θ . An energy dependence of the loss ions is observed and suggests a resonant interaction between energetic ions and the mode. (author)

  15. Computational Model of D-Region Ion Production Caused by Energetic Electron Precipitations Based on General Monte Carlo Transport Calculations

    Science.gov (United States)

    Kouznetsov, A.; Cully, C. M.

    2017-12-01

    During enhanced magnetic activities, large ejections of energetic electrons from radiation belts are deposited in the upper polar atmosphere where they play important roles in its physical and chemical processes, including VLF signals subionospheric propagation. Electron deposition can affect D-Region ionization, which are estimated based on ionization rates derived from energy depositions. We present a model of D-region ion production caused by an arbitrary (in energy and pitch angle) distribution of fast (10 keV - 1 MeV) electrons. The model relies on a set of pre-calculated results obtained using a general Monte Carlo approach with the latest version of the MCNP6 (Monte Carlo N-Particle) code for the explicit electron tracking in magnetic fields. By expressing those results using the ionization yield functions, the pre-calculated results are extended to cover arbitrary magnetic field inclinations and atmospheric density profiles, allowing ionization rate altitude profile computations in the range of 20 and 200 km at any geographic point of interest and date/time by adopting results from an external atmospheric density model (e.g. NRLMSISE-00). The pre-calculated MCNP6 results are stored in a CDF (Common Data Format) file, and IDL routines library is written to provide an end-user interface to the model.

  16. Fast-ion dynamics in the TEXTOR tokamak measured by collective Thomson scattering

    DEFF Research Database (Denmark)

    Bindslev, H.; Nielsen, S.K.; Porte, L.

    2006-01-01

    Here we present the first measurements by collective Thomson scattering of the evolution of fast-ion populations in a magnetically confined fusion plasma. 150 kW and 110 Ghz radiation from a gyrotron were scattered in the TEXTOR tokamak plasma with energetic ions generated by neutral beam injection...... and ion cyclotron resonance heating. The temporal behavior of the spatially resolved fast-ion velocity distribution is inferred from the received scattered radiation. The fast-ion dynamics at sawteeth and the slowdown after switch off of auxiliary heating is resolved in time. The latter is shown...

  17. Quantitative assessment of the ion-beam irradiation induced direct damage of nucleic acid bases through FTIR spectroscopy

    Energy Technology Data Exchange (ETDEWEB)

    Huang, Qing, E-mail: huangq@ipp.ac.cn [Key Laboratory of Ion Beam Bio-engineering, Institute of Technical Biology and Agriculture Engineering, Hefei Institutes of Physical Science, Chinese Academy of Sciences (China); University of Science and Technology of China, Hefei 230029, Anhui (China); Su, Xi; Yao, Guohua; Lu, Yilin; Ke, Zhigang; Liu, Jinghua; Wu, Yuejin; Yu, Zengliang [Key Laboratory of Ion Beam Bio-engineering, Institute of Technical Biology and Agriculture Engineering, Hefei Institutes of Physical Science, Chinese Academy of Sciences (China)

    2014-07-01

    Energetic particles exist ubiquitously in nature, and when they hit DNA molecules in organisms, they may induce critical biological effects such as mutation. It is however still a challenge to measure directly and quantitatively the damage imposed by the energetic ions on target DNA molecules. In this work we attempted to employ Fourier transformation infrared (FTIR) spectroscopy to assess the ion-induced direct damage of four nucleic acid bases, namely, thymine (T), cytosine (C), guanine (G), and adenine (A), which are the building blocks of DNA molecules. The samples were prepared as thin films, irradiated by argon ion-beams at raised ion fluences, and in the meantime measured by FTIR spectroscopy for the damage in a quasi-in-situ manner. It was found that the low-energy ion-beam induced radiosensitivity of the four bases shows the sequence G > T > C > A, wherein the possible mechanism was also discussed.

  18. Homologous recombination in Arabidopsis seeds along the track of energetic carbon ions

    International Nuclear Information System (INIS)

    Wang Ting; Li Fanghua; Liu Qingfang; Bian Po; Wang Jufang; Wu Yuejin; Wu Lijun; Li Wenjian

    2012-01-01

    Heavy ion irradiation has been used as radiotherapy of deep-seated tumors, and is also an inevitable health concern for astronauts in space mission. Unlike photons such as X-rays and γ-rays, a high linear energy transfer (LET) heavy ion has a varying energy distribution along its track. Therefore, it is important to determine the correlation of biological effects with the Bragg curve energy distribution of heavy ions. In this study, a continuous biological tissue equivalent was constructed using a layered cylinder of Arabidopsis seeds, which was irradiated with carbon ions of 87.5 MeV/nucleon. The position of energy loss peak in the seed pool was determined with CR-39 track detectors. The mutagenic effect in vivo along the path of carbon ions was investigated with the seeds in each layer as an assay unit, which corresponded to a given position in physical Bragg curve. Homologous recombination frequency (HRF), expression level of AtRAD54 gene, germination rate of seeds, and survival rate of young seedlings were used as checking endpoints, respectively. Our results showed that Arabidopsis S0 and S1 plants exhibited significant increases in HRF compared to their controls, and the expression level of AtRAD54 gene in S0 plants was significantly up-regulated. The depth-biological effect curves for HRF and the expression of AtRAD54 gene were not consistent with the physical Bragg curve. Differently, the depth-biological effect curves for the developmental endpoints matched generally with the physical Bragg curve. The results suggested a different response pattern of various types of biological events to heavy ion irradiation. It is also interesting that except for HRF in S0 plants, the depth-biological effect curves for each biological endpoint were similar for 5 Gy and 30 Gy of carbon irradiation.

  19. Homologous recombination in Arabidopsis seeds along the track of energetic carbon ions

    Energy Technology Data Exchange (ETDEWEB)

    Wang Ting [University of Science and Technology of China, 96 Jinzhai Road, Hefei 230026 (China); Key Laboratory of Ion Beam Bio-engineering, Institute of Technical Biology and Agricultural Engineering, Chinese Academy of Sciences, 350 Shushanhu Road, Hefei 230031 (China); Li Fanghua [Key Laboratory of Ion Beam Bio-engineering, Institute of Technical Biology and Agricultural Engineering, Chinese Academy of Sciences, 350 Shushanhu Road, Hefei 230031 (China); Liu Qingfang [Radiobiology Laboratory, Institute of Modern Physics, Chinese Academy of Sciences, 509 Nanchang Road, Lanzhou 730000 (China); Bian Po, E-mail: bianpo@ipp.ac.cn [Key Laboratory of Ion Beam Bio-engineering, Institute of Technical Biology and Agricultural Engineering, Chinese Academy of Sciences, 350 Shushanhu Road, Hefei 230031 (China); Wang Jufang [Radiobiology Laboratory, Institute of Modern Physics, Chinese Academy of Sciences, 509 Nanchang Road, Lanzhou 730000 (China); Wu Yuejin; Wu Lijun [Key Laboratory of Ion Beam Bio-engineering, Institute of Technical Biology and Agricultural Engineering, Chinese Academy of Sciences, 350 Shushanhu Road, Hefei 230031 (China); Li Wenjian [Radiobiology Laboratory, Institute of Modern Physics, Chinese Academy of Sciences, 509 Nanchang Road, Lanzhou 730000 (China)

    2012-09-01

    Heavy ion irradiation has been used as radiotherapy of deep-seated tumors, and is also an inevitable health concern for astronauts in space mission. Unlike photons such as X-rays and {gamma}-rays, a high linear energy transfer (LET) heavy ion has a varying energy distribution along its track. Therefore, it is important to determine the correlation of biological effects with the Bragg curve energy distribution of heavy ions. In this study, a continuous biological tissue equivalent was constructed using a layered cylinder of Arabidopsis seeds, which was irradiated with carbon ions of 87.5 MeV/nucleon. The position of energy loss peak in the seed pool was determined with CR-39 track detectors. The mutagenic effect in vivo along the path of carbon ions was investigated with the seeds in each layer as an assay unit, which corresponded to a given position in physical Bragg curve. Homologous recombination frequency (HRF), expression level of AtRAD54 gene, germination rate of seeds, and survival rate of young seedlings were used as checking endpoints, respectively. Our results showed that Arabidopsis S0 and S1 plants exhibited significant increases in HRF compared to their controls, and the expression level of AtRAD54 gene in S0 plants was significantly up-regulated. The depth-biological effect curves for HRF and the expression of AtRAD54 gene were not consistent with the physical Bragg curve. Differently, the depth-biological effect curves for the developmental endpoints matched generally with the physical Bragg curve. The results suggested a different response pattern of various types of biological events to heavy ion irradiation. It is also interesting that except for HRF in S0 plants, the depth-biological effect curves for each biological endpoint were similar for 5 Gy and 30 Gy of carbon irradiation.

  20. Numerical simulations of gas mixing effect in electron cyclotron resonance ion sources

    Directory of Open Access Journals (Sweden)

    V. Mironov

    2017-01-01

    Full Text Available The particle-in-cell Monte Carlo collisions code nam-ecris is used to simulate the electron cyclotron resonance ion source (ECRIS plasma sustained in a mixture of Kr with O_{2}, N_{2}, Ar, Ne, and He. The model assumes that ions are electrostatically confined in the ECR zone by a dip in the plasma potential. A gain in the extracted krypton ion currents is seen for the highest charge states; the gain is maximized when oxygen is used as a mixing gas. The special feature of oxygen is that most of the singly charged oxygen ions are produced after the dissociative ionization of oxygen molecules with a large kinetic energy release of around 5 eV per ion. The increased loss rate of energetic lowly charged ions of the mixing element requires a building up of the retarding potential barrier close to the ECR surface to equilibrate electron and ion losses out of the plasma. In the mixed plasmas, the barrier value is large (∼1  V compared to pure Kr plasma (∼0.01  V, with longer confinement times of krypton ions and with much higher ion temperatures. The temperature of the krypton ions is increased because of extra heating by the energetic oxygen ions and a longer time of ion confinement. In calculations, a drop of the highly charged ion currents of lighter elements is observed when adding small fluxes of krypton into the source. This drop is caused by the accumulation of the krypton ions inside plasma, which decreases the electron and ion confinement times.

  1. Spatial energy distribution around energetic ions in condensed phases. Study by thermoluminescence

    International Nuclear Information System (INIS)

    Montret-Brugerolle, M.

    1980-01-01

    One describes a model that allows the calculation of the spatial energy distribution around a heavy ion trajectory within the physical step of the phenomena involved (10 -13 s). Experimental data are collected in order to chek the model in the condensed phase. The experimental procedure is thermoluminescence (TL). LiF : Mg, Ti, CaF 2 : Dy and CaF 2 : Mn crystals are irradiated with 60 Co-γ rays and with heavy ions: He, Ne, Cu, Kr of various incident energies. An extensive study of the TL light induced by heavy ions bombardment is carried out as a function of the energy and density of the impinging ions. It is shown that the different response observed with respect to γ-irradiation is due neither to TL traps destruction nor to the recombination of a larger amount of charge-carriers. Experimental data and those obtained from the distribution of energy density are compared, and the agreement is satisfactory. Hence, it is thought that the model may be extended to condensed media [fr

  2. A quantal toy model for heavy-ion collisions

    International Nuclear Information System (INIS)

    Cassing, W.

    1987-01-01

    A one-dimensional toy model of moving finite boxes is analysed with respect to quantal phenomena associated with heavy-ion dynamics at low and intermediate energies. Special attention is payed to the relation between energy and momentum of the nucleons inside and outside the time-dependent mean field. A Wigner transformation of the one-body density matrix in space and time allows for a unique comparison with classical phase-space dynamics. It is found that high momentum components of the nuclear groundstate wave function approximately become on-shell during the heavy-ion reaction. This leads to the emission of energetic nucleons which do not appear classically. It is furthermore shown, that the low lying eigenstates of the dinuclear system for fixed time are only partly occupied throughout the reaction at intermediate energies. This opens up final phase space for nucleons after producing e.g. a pion or energetic photon. Through the present model does not allow for a reliable calculation of double differential nucleon spectra, pion or photon cross sections, it transparently shows the peculiar features of quantum dynamics in heavy-ion collisions. (orig.)

  3. SIMULATION OF ENERGETIC NEUTRAL ATOMS FROM SOLAR ENERGETIC PARTICLES

    Energy Technology Data Exchange (ETDEWEB)

    Wang, Linghua [Institute of Space Physics and Applied Technology, Peking University, Beijing 100871 (China); Li, Gang [Department of Space Science and CSPAR, University of Alabama in Huntsville, Huntsville, AL 35899 (United States); Shih, Albert Y. [Solar Physics Laboratory, NASA Goddard Space Flight Center, Greenbelt, MD 20770 (United States); Lin, Robert P. [Space Sciences Laboratory, University of California, Berkeley, CA 94720-7450 (United States); Wimmer-Schweingruber, Robert F., E-mail: wanglhwang@gmail.com [Institut fuer Experimentelle und Angewandte Physik, University of Kiel, Leibnizstrasse 11, D-24118 Kiel (Germany)

    2014-10-01

    Energetic neutral atoms (ENAs) provide the only way to observe the acceleration site of coronal-mass-ejection-driven (CME-driven) shock-accelerated solar energetic particles (SEPs). In gradual SEP events, energetic protons can charge exchange with the ambient solar wind or interstellar neutrals to become ENAs. Assuming a CME-driven shock with a constant speed of 1800 km s{sup –1} and compression ratio of 3.5, propagating from 1.5 to 40 R{sub S} , we calculate the accelerated SEPs at 5-5000 keV and the resulting ENAs via various charge-exchange interactions. Taking into account the ENA losses in the interplanetary medium, we obtain the flux-time profiles of these solar ENAs reaching 1 AU. We find that the arriving ENAs at energies above ∼100 keV show a sharply peaked flux-time profile, mainly originating from the shock source below 5 R{sub S} , whereas the ENAs below ∼20 keV have a flat-top time profile, mostly originating from the source beyond 10 R{sub S} . Assuming the accelerated protons are effectively trapped downstream of the shock, we can reproduce the STEREO ENA fluence observations at ∼2-5 MeV/nucleon. We also estimate the flux of ENAs coming from the charge exchange of energetic storm protons, accelerated by the fast CME-driven shock near 1 AU, with interstellar hydrogen and helium. Our results suggest that appropriate instrumentation would be able to detect ENAs from SEPs and to even make ENA images of SEPs at energies above ∼10-20 keV.

  4. Simulation of Alfvén eigenmode bursts using a hybrid code for nonlinear magnetohydrodynamics and energetic particles

    Science.gov (United States)

    Todo, Y.; Berk, H. L.; Breizman, B. N.

    2012-03-01

    A hybrid simulation code for nonlinear magnetohydrodynamics (MHD) and energetic-particle dynamics has been extended to simulate recurrent bursts of Alfvén eigenmodes by implementing the energetic-particle source, collisions and losses. The Alfvén eigenmode bursts with synchronization of multiple modes and beam ion losses at each burst are successfully simulated with nonlinear MHD effects for the physics condition similar to a reduced simulation for a TFTR experiment (Wong et al 1991 Phys. Rev. Lett. 66 1874, Todo et al 2003 Phys. Plasmas 10 2888). It is demonstrated with a comparison between nonlinear MHD and linear MHD simulation results that the nonlinear MHD effects significantly reduce both the saturation amplitude of the Alfvén eigenmodes and the beam ion losses. Two types of time evolution are found depending on the MHD dissipation coefficients, namely viscosity, resistivity and diffusivity. The Alfvén eigenmode bursts take place for higher dissipation coefficients with roughly 10% drop in stored beam energy and the maximum amplitude of the dominant magnetic fluctuation harmonic δBm/n/B ~ 5 × 10-3 at the mode peak location inside the plasma. Quadratic dependence of beam ion loss rate on magnetic fluctuation amplitude is found for the bursting evolution in the nonlinear MHD simulation. For lower dissipation coefficients, the amplitude of the Alfvén eigenmodes is at steady levels δBm/n/B ~ 2 × 10-3 and the beam ion losses take place continuously. The beam ion pressure profiles are similar among the different dissipation coefficients, and the stored beam energy is higher for higher dissipation coefficients.

  5. Approach to equilibrium in high energy heavy ion collisions

    International Nuclear Information System (INIS)

    Zimanyi, J.

    1981-01-01

    With the aim to clarify somewhat the question of equilibration in the following we investigate the approach to equilibrium of particle composition and momentum distribution of the particles within the firecloud formed in the central collision of energetic heavy ions. (orig.)

  6. Understanding the Driver of Energetic Electron Precipitation Using Coordinated Multi-Satellite Measurements

    Science.gov (United States)

    Capannolo, L.; Li, W.; Ma, Q.

    2017-12-01

    Electron precipitation into the upper atmosphere is one of the important loss mechanisms in the Earth's inner magnetosphere. Various magnetospheric plasma waves (i.e., chorus, plasmaspheric hiss, electromagnetic ion cyclotron waves, etc.) play an important role in scattering energetic electrons into the loss cone, thus enhance ionization in the upper atmosphere and affect ring current and radiation belt dynamics. The present study evaluates conjunction events where low-earth-orbiting satellites (twin AeroCube-6) and near-equatorial satellites (twin Van Allen Probes) are located roughly along the same magnetic field line. By analyzing electron flux variation at various energies (> 35 keV) measured by AeroCube-6 and wave and electron measurements by Van Allen Probes, together with quasilinear diffusion theory and modeling, we determine the physical process of driving the observed energetic electron precipitation for the identified electron precipitation events. Moreover, the twin AeroCube-6 also helps us understand the spatiotemporal effect and constrain the coherent size of each electron precipitation event.

  7. Ion induced polymerization in benzene frozen films

    Energy Technology Data Exchange (ETDEWEB)

    Calcagno, G [Catania Univ. (Italy). Ist. di Fisica; Strazzulla, G [Catania Univ. (Italy). Osservatorio Astrofisico; Fichera, M; Foti, G [Catania Univ. (Italy). Ist. di Radiologia

    1983-07-01

    The cross section of the polymerization process induced by energetic protons colliding with frozen benzene layers has been measured. The results have been described by a simple theory and they show that the process is a volume one occurring along the ion track and interesting all of the crossed layers.

  8. Data on trapping and re-emission of energetic hydrogen isotopes and helium in materials, supplement 1

    International Nuclear Information System (INIS)

    Yamaguchi, Sadae; Sugizaki, Yasuaki; Ozawa, Kunio; Nakai, Yohta.

    1984-05-01

    This is the supplement to the data on trapping and re-emission of energetic hydrogen isotopes and helium in materials (JAERI-M 82-118). It contains 32 data up to end of 1982, dividing it into following 6 sections: 1) Dose Dependence, 2) Target Material Dependence, 3) Target Temperature Dependence, 4) Incident Energy Dependence, 5) Damage Effects and 6) Ion-Induced Release. (author)

  9. Ion-enhanced gas-surface chemistry: The influence of the mass of the incident ion

    International Nuclear Information System (INIS)

    Gerlach-Meyer, U.; Coburn, J.W.; Kay, E.

    1981-01-01

    There are many examples of situations in which a gas-surface reaction rate is increased when the surface is simultaneously subjected to energetic particle bombardment. There are several possible mechanisms which could be involved in this radiation-enhanced gas-surface chemistry. In this study, the reaction rate of silicon, as determined from the etch yield, is measured during irradiation of the Si surface with 1 keV He + , Ne + , and Ar + ions while the surface is simultaneously subjected to fluxes of XeF 2 or Cl 2 molecules. Etch yields as high as 25 Si atoms/ion are observed for XeF 2 and Ar + on Si. A discussion is presented of the extent to which the results clarify the mechanisms responsible for ion-enhanced gas-surface chemistry. (orig.)

  10. Solvation of ions in the gas-phase: a molecular dynamics simulation

    Science.gov (United States)

    Cabarcos, Orlando M.; Lisy, James M.

    1996-07-01

    Molecular dynamics simulations have been performed on the collision between a cesium ion and a cluster of twenty methanol molecules. This process, generating a solvated ion, was studied over a range (1 to 25 eV) of eight collision energies. Preliminary analysis of this gas phase solvation has included the distribution of final ion cluster sizes, fragmentation patterns, solvation timescales and energetics. Two distinct patterns have emerged: a ballistic penetration of the neutral cluster at the higher collision energies and an evaporative evolution of the cluster ion at lower collision energies.

  11. 2013 GASEOUS IONS GORDON RESEARCH CONFERENCE, FEBRUARY 24 - MARCH 1, 2013

    Energy Technology Data Exchange (ETDEWEB)

    Williams, Evan

    2013-03-01

    The Gaseous Ions: Structures, Energetics and Reactions Gordon Research Conference will focus on ions and their interactions with molecules, surfaces, electrons, and light. The long-standing goal of our community is to develop new strategies for capturing complex molecular architectures as gas phase ions where they can be isolated, characterized and manipulated with great sensitivity. Emergent areas of interest include catalytic mechanisms, cryogenic processing of ions extracted from solution, ion fragmentation mechanisms, and new methods for ion formation and structural characterization. The conference will cover theoretical and experimental advances on systems ranging from model studies at the molecular scale to preparation of nanomaterials and characterization of large biological molecules.

  12. An new MHD/kinetic model for exploring energetic particle production in macro-scale systems

    Science.gov (United States)

    Drake, J. F.; Swisdak, M.; Dahlin, J. T.

    2017-12-01

    A novel MHD/kinetic model is being developed to explore magneticreconnection and particle energization in macro-scale systems such asthe solar corona and the outer heliosphere. The model blends the MHDdescription with a macro-particle description. The rationale for thismodel is based on the recent discovery that energetic particleproduction during magnetic reconnection is controlled by Fermireflection and Betatron acceleration and not parallel electricfields. Since the former mechanisms are not dependent on kineticscales such as the Debye length and the electron and ion inertialscales, a model that sheds these scales is sufficient for describingparticle acceleration in macro-systems. Our MHD/kinetic model includesmacroparticles laid out on an MHD grid that are evolved with the MHDfields. Crucially, the feedback of the energetic component on the MHDfluid is included in the dynamics. Thus, energy of the total system,the MHD fluid plus the energetic component, is conserved. The systemhas no kinetic scales and therefore can be implemented to modelenergetic particle production in macro-systems with none of theconstraints associated with a PIC model. Tests of the new model insimple geometries will be presented and potential applications will bediscussed.

  13. An alpha particle measurement system using an energetic neutral helium beam in ITER (invited)

    Energy Technology Data Exchange (ETDEWEB)

    Sasao, M.; Tanaka, N.; Terai, K.; Kaneko, O. [Graduate school of Engineering, Tohoku University, Sendai 980-8579 (Japan); Kisaki, M.; Kobuchi, T.; Tsumori, K.; Okamoto, A.; Kitajima, S. [National Institute for Fusion Science, Toki, Gifu 509-5292 (Japan); Shinto, K. [IFMIF R and D Center, Japan Atomic Energy Agency, Rokkasho, Aomori 039-3212 (Japan); Wada, M. [Graduate School of Engineering, Doshisha University, Kyotanabe, Kyoto 610-0321 (Japan)

    2012-02-15

    An energetic helium neutral beam is involved in the beam neutralization measurement system of alpha particles confined in a DT fusion plasma. A full size strong-focusing He{sup +} ion source (2 A, the beam radius of 11.3 mm, the beam energy less than 20 keV). Present strong-focusing He{sup +} ion source shows an emittance diagram separated for each beamlet of multiple apertures without phase space mixing, despite the space charge of a beamlet is asymmetric and the beam flow is non-laminar. The emittance of beamlets in the peripheral region was larger than that of center. The heat load to the plasma electrode was studied to estimate the duty factor for the ITER application.

  14. Identification of minority ion cyclotron emission during radio frequency heating in the JET tokamak

    International Nuclear Information System (INIS)

    Cottrell, G.A.

    1999-11-01

    First measurements and identification of Minority Ion Cyclotron Emission (MICE) during ICRF (H)D minority heating in the JET tokamak are presented. An inner wall radiofrequency (rf) probe shows the new single MICE spectral line, downshifted from the heating, frequency and appearing ∼ 400 ms after the ICRH switch-on. The line is narrow (Δω / ω) ∼ 0.04), characterised by the ion cyclotron frequency of minority protons in the outer edge mid-plane plasma and is observed irrespective of whether single or multi-frequency ICRH is applied. Threshold conditions for MICE are: coupled RF power to the plasma P rf ≥ 4.5 MW; total fast ion energy content W fast ≥ 0.6 MJ. At the time of the rapid switch-on of MICE, the measured power loss from the energetic minority ions is ∼ 0.1 ± 0.1 MW, constituting rf . The observations are consistent with the classical evolution and population of the plasma edge with ∼ 3 MeV ICRH protons on orbits near the outboard limiters. Particle loss and energy filtering contribute to a local non-Maxwellian energetic ion distribution which is susceptible to ion cyclotron instability

  15. Photoactive energetic materials

    Science.gov (United States)

    Chavez, David E.; Hanson, Susan Kloek; Scharff, Robert Jason; Veauthier, Jacqueline Marie; Myers, Thomas Winfield

    2018-02-27

    Energetic materials that are photoactive or believed to be photoactive may include a conventional explosive (e.g. PETN, nitroglycerine) derivatized with an energetic UV-absorbing and/or VIS-absorbing chromophore such as 1,2,4,5-tetrazine or 1,3,5-triazine. Absorption of laser light having a suitably chosen wavelength may result in photodissociation, decomposition, and explosive release of energy. These materials may be used as ligands to form complexes. Coordination compounds include such complexes with counterions. Some having the formula M(L).sub.n.sup.2+ were synthesized, wherein M is a transition metal and L is a ligand and n is 2 or 3. These may be photoactive upon exposure to a laser light beam having an appropriate wavelength of UV light, near-IR and/or visible light. Photoactive materials also include coordination compounds bearing non-energetic ligands; in this case, the counterion may be an oxidant such as perchlorate.

  16. Observations of transverse ion acceleration in the topside auroral ionosphere

    International Nuclear Information System (INIS)

    Garbe, G.P.; Arnoldy, R.L.; Moore, T.E.; Kintner, P.M.; Vago, J.L.

    1992-01-01

    Data obtained from a sounding rocket flight which reached an apogee of 927 km and passed through several auroral arcs are reported. During portions of the flight when the rocket was not in an energetic auroral structure, the ion data are fit to a Maxwellian function which yields the plasma parameters. Throughout the middle portion of the flight when above 700 km altitude, ion distributions having a superthermal tail were measured. These ion distributions generally coexisted with a cold thermal core distribution and peaked at pitch angles slightly greater than 90 degree, which identifies them as conic distributions. These ions can be modeled using a bi-Maxwellian distribution function with a perpendicular (to B) temperature about 10 times greater than the parallel temperature of 0.15 eV. When the rocket was immersed in energetic auroral electron precipitation, two other ion distributions were observed. Transversely accelerated ions which represented bulk heating of the ambient population were observed. Transversely accelerated ions which represented bulk heating of the ambient population were observed continuously in these arcs. The characteristic perpendicular energy of the transversely bulk heated ions reached as high as 3 eV compared to typically less than 0.4 eV during nonauroral times. Cold ions flowing down the magnetic field were also continuously observed when the rocket was immersed in auroral electron precipitation and had downward speeds between 3 and 5 km/s. If one balances electric and collisional forces, these speeds translate to an electric field pointing into the atmosphere of magnitude 0.01 mV/m. A close correlation between auroral electron precipitation, measured electrostatic oxygen cyclotron waves, cold downflowing ions and transversely bulk heated ions will be shown

  17. Production of High-Intensity, Highly Charged Ions

    CERN Document Server

    Gammino, S.

    2013-12-16

    In the past three decades, the development of nuclear physics facilities for fundamental and applied science purposes has required an increasing current of multicharged ion beams. Multiple ionization implies the formation of dense and energetic plasmas, which, in turn, requires specific plasma trapping configurations. Two types of ion source have been able to produce very high charge states in a reliable and reproducible way: electron beam ion sources (EBIS) and electron cyclotron resonance ion sources (ECRIS). Multiple ionization is also obtained in laser-generated plasmas (laser ion sources (LIS)), where the high-energy electrons and the extremely high electron density allow step-by-step ionization, but the reproducibility is poor. This chapter discusses the atomic physics background at the basis of the production of highly charged ions and describes the scientific and technological features of the most advanced ion sources. Particular attention is paid to ECRIS and the latest developments, since they now r...

  18. Detection and cellular localisation of the synthetic soluble macromolecular drug carrier pHPMA

    Czech Academy of Sciences Publication Activity Database

    Kissel, M.; Peschke, P.; Šubr, Vladimír; Ulbrich, Karel; Strunz, A. M.; Kühnlein, R.; Debus, J.; Friedrich, E.

    2002-01-01

    Roč. 29, č. 8 (2002), s. 1055-1062 ISSN 1619-7070 R&D Projects: GA ČR GV307/96/K226 Institutional research plan: CEZ:AV0Z4050913 Keywords : EPR effect * Radiolabelled macromolecules * Pharmacokinetic Subject RIV: CD - Macromolecular Chemistry Impact factor: 3.568, year: 2002

  19. UQlust: combining profile hashing with linear-time ranking for efficient clustering and analysis of big macromolecular data.

    Science.gov (United States)

    Adamczak, Rafal; Meller, Jarek

    2016-12-28

    Advances in computing have enabled current protein and RNA structure prediction and molecular simulation methods to dramatically increase their sampling of conformational spaces. The quickly growing number of experimentally resolved structures, and databases such as the Protein Data Bank, also implies large scale structural similarity analyses to retrieve and classify macromolecular data. Consequently, the computational cost of structure comparison and clustering for large sets of macromolecular structures has become a bottleneck that necessitates further algorithmic improvements and development of efficient software solutions. uQlust is a versatile and easy-to-use tool for ultrafast ranking and clustering of macromolecular structures. uQlust makes use of structural profiles of proteins and nucleic acids, while combining a linear-time algorithm for implicit comparison of all pairs of models with profile hashing to enable efficient clustering of large data sets with a low memory footprint. In addition to ranking and clustering of large sets of models of the same protein or RNA molecule, uQlust can also be used in conjunction with fragment-based profiles in order to cluster structures of arbitrary length. For example, hierarchical clustering of the entire PDB using profile hashing can be performed on a typical laptop, thus opening an avenue for structural explorations previously limited to dedicated resources. The uQlust package is freely available under the GNU General Public License at https://github.com/uQlust . uQlust represents a drastic reduction in the computational complexity and memory requirements with respect to existing clustering and model quality assessment methods for macromolecular structure analysis, while yielding results on par with traditional approaches for both proteins and RNAs.

  20. Dense ion clouds of 0.1 − 2 keV ions inside the CPS-region observed by Astrid-2

    Directory of Open Access Journals (Sweden)

    O. Norberg

    Full Text Available Data from the Astrid-2 satellite taken between April and July 1999 show several examples of dense ion clouds in the 0.1–2 keV energy range inside the inner mag-netosphere, both in the northern and southern hemispheres. These inner magnetospheric ion clouds are found predomi-nantly in the early morning sector, suggesting that they could have originated from substorm-related ion injections on the night side. However, their location and density show no cor-relation with Kp, and their energy-latitude dispersion is not easily reproduced by a simple particle drift model. There-fore, these ion clouds are not necessarily caused by substorm-related ion injections. Alternative explanations for the ion clouds are the direct solar wind injections and up-welling ions from the other hemisphere. These explanations do not, however, account for all of the observations.Key words. Magnetospheric physics (energetic particles, trapped; magnetospheric configuration and dynamics; storm and substorms

  1. On the Effect of IMF Turning on Ion Dynamics at Mercury

    Science.gov (United States)

    Delcourt, D. C.; Moore, T. E.; Fok, M.-C. H.

    2011-01-01

    We investigate the effect of a rotation of the Interplanetary Magnetic Field (IMF) on the transport of magnetospheric ion populations at Mercury. We focus on ions of planetary origin and investigate their large-scale circulation using three-dimensional single-particle simulations. We show that a nonzero Bx component of the IMF leads to a pronounced asymmetry in the overall circulation pattern . In particular, we demonstrate that the centrifugal acceleration due to curvature of the E x B drift paths is more pronounced in one hemisphere than the other, leading to filling of the magnetospheric lobes and plasma sheet with more or less energetic material depending upon the hemisphere of origin. Using a time-varying electric and magnetic field model, we investigate the response of ions to rapid (a few tens of seconds) re-orientation of the IMF. We show that, for ions with gyroperiods comparable to the field variation time scale, the inductive electric field should lead to significant nonadiabatic energization, up to several hundreds of eVs or a few keVs. It thus appears that IMP turning at Mercury should lead to localized loading of the magnetosphere with energetic material of planetary origin (e.g., Na+).

  2. Study on the desorption yield for natural botanic sample induced by energetic heavy ions

    International Nuclear Information System (INIS)

    Xue, J.M.; Wang, Y.G.; Du, G.H.; Yan, S.; Zhao, W.J.

    2002-01-01

    The dependence of desorption yield for the natural botanic sample bombarded with heavy ion on the electronic stopping power (S e ) and dose has been measured by weighing sample mass before and after irradiation. Primary ions including 50 keV N + , 1.5 MeV F + , 3.0 MeV F 2+ , 4.0 MeV F 2+ and 3.0 MeV Si 2+ were used in the experiment. Three megaelectron volts of F 2+ with doses ranging from 4x10 15 to 4x10 16 ions/cm 2 were used in order to investigate the influence of ion dose. A mass spectrum from the sample bombarded with 3 MeV Si 2+ was also taken for a better understanding of the desorption process. Results show that the natural botanic sample is very easily to be desorpted. The yield of MeV heavy ions can be as high as thousands CH 2 O/ion, and significantly depends on both the S e and dose. The measured yields increase quickly with S e , but drop down with increasing ion dose. These results fit roughly with the prediction of the pressure pulse model

  3. Predictive Mechanical Characterization of Macro-Molecular Material Chemistry Structures of Cement Paste at Nano Scale - Two-phase Macro-Molecular Structures of Calcium Silicate Hydrate, Tri-Calcium Silicate, Di-Calcium Silicate and Calcium Hydroxide

    Science.gov (United States)

    Padilla Espinosa, Ingrid Marcela

    Concrete is a hierarchical composite material with a random structure over a wide range of length scales. At submicron length scale the main component of concrete is cement paste, formed by the reaction of Portland cement clinkers and water. Cement paste acts as a binding matrix for the other components and is responsible for the strength of concrete. Cement paste microstructure contains voids, hydrated and unhydrated cement phases. The main crystalline phases of unhydrated cement are tri-calcium silicate (C3S) and di-calcium silicate (C2S), and of hydrated cement are calcium silicate hydrate (CSH) and calcium hydroxide (CH). Although efforts have been made to comprehend the chemical and physical nature of cement paste, studies at molecular level have primarily been focused on individual components. Present research focuses on the development of a method to model, at molecular level, and analysis of the two-phase combination of hydrated and unhydrated phases of cement paste as macromolecular systems. Computational molecular modeling could help in understanding the influence of the phase interactions on the material properties, and mechanical performance of cement paste. Present work also strives to create a framework for molecular level models suitable for potential better comparisons with low length scale experimental methods, in which the sizes of the samples involve the mixture of different hydrated and unhydrated crystalline phases of cement paste. Two approaches based on two-phase cement paste macromolecular structures, one involving admixed molecular phases, and the second involving cluster of two molecular phases are investigated. The mechanical properties of two-phase macromolecular systems of cement paste consisting of key hydrated phase CSH and unhydrated phases C3S or C2S, as well as CSH with the second hydrated phase CH were calculated. It was found that these cement paste two-phase macromolecular systems predicted an isotropic material behavior. Also

  4. Study on penetration-induced initiation of energetic fragment

    Science.gov (United States)

    Qiao, Xiangxin; Xu, Heyang

    2017-09-01

    In order to investigate penetration-induced initiation of energetic fragment penetrating target, PTFE/Al (mass ratio 73.5/26.5) pressed and sintered into a Ф8mm × 8mm cylinder. To form energetic fragment, the cylinder was put into a closed container made by 35CrMnSiA. The container is 12mm long, 2mm thick. Energetic fragments were launched by a 14.5mm ballistic gun with a series of velocities and the penetrate process was simulated by AUTODYN-3D. The results show that the stress peak of energetic material exceed the initiation threshold, and energetic material will deflagrate, when energetic fragments impact velocity more than 800 m/s. The research results can provide reference for designs of energetic warhead.

  5. Coevolutionary constraints in the sequence-space of macromolecular complexes reflect their self-assembly pathways.

    Science.gov (United States)

    Mallik, Saurav; Kundu, Sudip

    2017-07-01

    Is the order in which biomolecular subunits self-assemble into functional macromolecular complexes imprinted in their sequence-space? Here, we demonstrate that the temporal order of macromolecular complex self-assembly can be efficiently captured using the landscape of residue-level coevolutionary constraints. This predictive power of coevolutionary constraints is irrespective of the structural, functional, and phylogenetic classification of the complex and of the stoichiometry and quaternary arrangement of the constituent monomers. Combining this result with a number of structural attributes estimated from the crystal structure data, we find indications that stronger coevolutionary constraints at interfaces formed early in the assembly hierarchy probably promotes coordinated fixation of mutations that leads to high-affinity binding with higher surface area, increased surface complementarity and elevated number of molecular contacts, compared to those that form late in the assembly. Proteins 2017; 85:1183-1189. © 2017 Wiley Periodicals, Inc. © 2017 Wiley Periodicals, Inc.

  6. Hadron chemistry in heavy ion collisions

    International Nuclear Information System (INIS)

    Montvay, I.; Zimanyi, J.

    1978-06-01

    In the models for energetic heavy ion reactions it is assumed that during the reaction a hot and dense nuclear matter, a fireball is formed from all or a part of nucleons of the target and projectile nuclei. The process is similar to the chemical processes leading to dynamical equilibrium. The relaxation times necessary to establish ''chemical'' equilibrium among different hadrons in hot, dense hadronic matter is deducted in a statistical model. Consequences for heavy ion collisions are discussed. The possibility of Bose-Einstein pion condensation around the break-up time of the nuclear fireball is pointed out. (D.P.)

  7. Mammalian energetics. Flexible energetics of cheetah hunting strategies provide resistance against kleptoparasitism.

    Science.gov (United States)

    Scantlebury, David M; Mills, Michael G L; Wilson, Rory P; Wilson, John W; Mills, Margaret E J; Durant, Sarah M; Bennett, Nigel C; Bradford, Peter; Marks, Nikki J; Speakman, John R

    2014-10-03

    Population viability is driven by individual survival, which in turn depends on individuals balancing energy budgets. As carnivores may function close to maximum sustained power outputs, decreased food availability or increased activity may render some populations energetically vulnerable. Prey theft may compromise energetic budgets of mesopredators, such as cheetahs and wild dogs, which are susceptible to competition from larger carnivores. We show that daily energy expenditure (DEE) of cheetahs was similar to size-based predictions and positively related to distance traveled. Theft at 25% only requires cheetahs to hunt for an extra 1.1 hour per day, increasing DEE by just 12%. Therefore, not all mesopredators are energetically constrained by direct competition. Other factors that increase DEE, such as those that increase travel, may be more important for population viability. Copyright © 2014, American Association for the Advancement of Science.

  8. Heavy ion inertial fusion - an overview

    International Nuclear Information System (INIS)

    Lawson, J.D.

    1983-09-01

    Energetic heavy ions represent an alternative to laser light and light ions as ''drivers'' for supplying energy for inertial confinement fusion. To induce ignition of targets containing thermonuclear fuel, an energy of several megajoules has to be focused on to a target with radius a few millimetres in a time of some tens of nanoseconds. Serious study of the use of heavy ion drivers for producing useful power in this way has been underway for seven years, though funding has been at a low level. In this paper the requirements for targets, accelerator, and reactor vessel for containing the thermonuclear explosion are surveyed, and some of the problems to be solved before the construction of a power station can realistically be contemplated are discussed. (author)

  9. Fusion reaction spectra produced by anisotropic fast ions in the PLT tokamak

    International Nuclear Information System (INIS)

    Heidbrink, W.W.

    1984-02-01

    For beam-target fusion reactions, collimated measurements of the energy spectrum of one of the reaction products can provide information on the degree of anisotropy of the reacting beam ions. Measurements of the spectrum of 15 MeV protons produced by reactions between energetic 3 He ions and relatively cold deuterons during fast wave minority heating in the PLT tokamak indicate that the velocity distribution of fast 3 He ions is peaked perpendicular to the tokamak magnetic field

  10. A simple photoionization scheme for characterizing electron and ion spectrometers

    Energy Technology Data Exchange (ETDEWEB)

    Wituschek, A.; Vangerow, J. von; Grzesiak, J.; Stienkemeier, F.; Mudrich, M., E-mail: mudrich@physik.uni-freiburg.de [Physikalisches Institut, Universität Freiburg, 79104 Freiburg (Germany)

    2016-08-15

    We present a simple diode laser-based photoionization scheme for generating electrons and ions with well-defined spatial and energetic (≲2 eV) structures. This scheme can easily be implemented in ion or electron imaging spectrometers for the purpose of off-line characterization and calibration. The low laser power ∼1 mW needed from a passively stabilized diode laser and the low flux of potassium atoms in an effusive beam make our scheme a versatile source of ions and electrons for applications in research and education.

  11. Study on the desorption yield for natural botanic sample induced by energetic heavy ions

    CERN Document Server

    Xue, J M; Du, G H; Yan, S; Zhao, W J

    2002-01-01

    The dependence of desorption yield for the natural botanic sample bombarded with heavy ion on the electronic stopping power (S sub e) and dose has been measured by weighing sample mass before and after irradiation. Primary ions including 50 keV N sup + , 1.5 MeV F sup + , 3.0 MeV F sup 2 sup + , 4.0 MeV F sup 2 sup + and 3.0 MeV Si sup 2 sup + were used in the experiment. Three megaelectron volts of F sup 2 sup + with doses ranging from 4x10 sup 1 sup 5 to 4x10 sup 1 sup 6 ions/cm sup 2 were used in order to investigate the influence of ion dose. A mass spectrum from the sample bombarded with 3 MeV Si sup 2 sup + was also taken for a better understanding of the desorption process. Results show that the natural botanic sample is very easily to be desorpted. The yield of MeV heavy ions can be as high as thousands CH sub 2 O/ion, and significantly depends on both the S sub e and dose. The measured yields increase quickly with S sub e , but drop down with increasing ion dose. These results fit roughly with the pr...

  12. Energy transfer between energetic ring current H(+) and O(+) by electromagnetic ion cyclotron waves

    Science.gov (United States)

    Thorne, Richard M.; Horne, Richard B.

    1994-01-01

    Electromagnetic ion cyclotron (EMIC) waves in the frequency range below the helium gyrofrequency can be excited in the equatorial region of the outer magnetosphere by cyclotron resonant instability with anisotropic ring current H(+) ions. As the unducted waves propagate to higher latitudes, the wave normal should become highly inclined to the ambient magnetic field. Under such conditions, wave energy can be absorbed by cyclotron resonant interactions with ambient O(+), leading to ion heating perpendicular to the ambient magnetic field. Resonant wave absorption peaks in the vicinity of the bi-ion frequency and the second harmonic of the O(+) gyrofrequrency. This absorption should mainly occur at latitudes between 10 deg and 30 deg along auroral field lines (L is greater than or equal to 7) in the postnoon sector. The concomitant ion heating perpendicular to the ambient magnetic field can contribute to the isotropization and geomagnetic trapping of collapsed O(+) ion conics (or beams) that originate from a low-altitude ionospheric source region. During geomagnetic storms when the O(+) content of the magnetosphere is significantly enhanced, the absorption of EMIC waves should become more efficient, and it may contribute to the observed acceleration of O(+) ions of ionospheric origin up to ring current energies.

  13. Radiation damage to nucleoprotein complexes in macromolecular crystallography

    International Nuclear Information System (INIS)

    Bury, Charles; Garman, Elspeth F.; Ginn, Helen Mary; Ravelli, Raimond B. G.; Carmichael, Ian; Kneale, Geoff; McGeehan, John E.

    2015-01-01

    Quantitative X-ray induced radiation damage studies employing a model protein–DNA complex revealed a striking partition of damage sites. The DNA component was observed to be far more resistant to specific damage compared with the protein. Significant progress has been made in macromolecular crystallography over recent years in both the understanding and mitigation of X-ray induced radiation damage when collecting diffraction data from crystalline proteins. In contrast, despite the large field that is productively engaged in the study of radiation chemistry of nucleic acids, particularly of DNA, there are currently very few X-ray crystallographic studies on radiation damage mechanisms in nucleic acids. Quantitative comparison of damage to protein and DNA crystals separately is challenging, but many of the issues are circumvented by studying pre-formed biological nucleoprotein complexes where direct comparison of each component can be made under the same controlled conditions. Here a model protein–DNA complex C.Esp1396I is employed to investigate specific damage mechanisms for protein and DNA in a biologically relevant complex over a large dose range (2.07–44.63 MGy). In order to allow a quantitative analysis of radiation damage sites from a complex series of macromolecular diffraction data, a computational method has been developed that is generally applicable to the field. Typical specific damage was observed for both the protein on particular amino acids and for the DNA on, for example, the cleavage of base-sugar N 1 —C and sugar-phosphate C—O bonds. Strikingly the DNA component was determined to be far more resistant to specific damage than the protein for the investigated dose range. At low doses the protein was observed to be susceptible to radiation damage while the DNA was far more resistant, damage only being observed at significantly higher doses

  14. Proposed LLNL electron beam ion trap

    International Nuclear Information System (INIS)

    Marrs, R.E.; Egan, P.O.; Proctor, I.; Levine, M.A.; Hansen, L.; Kajiyama, Y.; Wolgast, R.

    1985-01-01

    The interaction of energetic electrons with highly charged ions is of great importance to several research fields such as astrophysics, laser fusion and magnetic fusion. In spite of this importance there are almost no measurements of electron interaction cross sections for ions more than a few times ionized. To address this problem an electron beam ion trap (EBIT) is being developed at LLNL. The device is essentially an EBIS except that it is not intended as a source of extracted ions. Instead the (variable energy) electron beam interacting with the confined ions will be used to obtain measurements of ionization cross sections, dielectronic recombination cross sections, radiative recombination cross sections, energy levels and oscillator strengths. Charge-exchange recombinaion cross sections with neutral gasses could also be measured. The goal is to produce and study elements in many different charge states up to He-like xenon and Ne-like uranium. 5 refs., 2 figs

  15. Ion Chromatography-on-a-chip for Water Quality Analysis

    Science.gov (United States)

    Kidd, R. D.; Noell, A.; Kazarians, G.; Aubrey, A. D.; Scianmarello, N.; Tai, Y.-C.

    2015-01-01

    We report progress towards developing a Micro-Electro-Mechanical Systems (MEMS)- based ion chromatograph (IC) for crewed spacecraft water analysis. This IC-chip is an offshoot of a NASA-funded effort to produce a high performance liquid chromatograph (HPLC)-chip. This HPLC-chip system would require a desalting (i.e. ion chromatography) step. The complete HPLC instrument consists of the Jet Propulsion Labortory's (JPL's) quadrupole ion trap mass spectrometer integrated with a state-of-the-art MEMS liquid chromatograph (LC) system developed by the California Institute of Technology's (Caltech's) Micromachining Laboratory. The IC version of the chip consist of an electrolysis-based injector, a separation column, two electrolysis pumps for gradient generation, mixer, and a built-in conductivity detector. The HPLC version of the chip also includes a nanospray tip. The low instrument mass, coupled with its high analytical capabilities, makes the LC chip ideally suitable for wide range of applications such as trace contaminant, inorganic analytical science and, when coupled to a mass spectrometer, a macromolecular detection system for either crewed space exploration vehicles or robotic planetary missions.

  16. Development of ECR ion source for VEC

    International Nuclear Information System (INIS)

    Bose, D.K.; Taki, G.S.; Nabhiraj, P.Y.; Pal, G.; Mallik, C.; Bhandari, R.K.

    1997-01-01

    A 6.4 GHz Electron Cyclotron Resonance Ion Source (ECRIS) was developed at the VEC centre to enable acceleration of heavy ions with the K=130, Variable Energy Cyclotron (VEC). Heavy ions which will be sufficiently energetic after acceleration from the cyclotron will be utilised to explore new fields of research. VEC ECRIS was first made operational in April 1991. Initially the stability and intensity of high charge state (z) beam were poor. Constant efforts were paid to improve source performance. Finally going to high field operation that is improving the plasma confinement, desired stability and high output current were achieved. At present stable 16 O beam up to 50 eμA maximum is available from VEC ECRIS. Many other high- z ion beam of gaseous species are also available. (author)

  17. Statistical study of ion pitch-angle distributions

    International Nuclear Information System (INIS)

    Sibeck, D.G.; Mcentire, R.W.; Lui, A.T.Y.; Krimigis, S.M.

    1987-01-01

    Preliminary results of a statistical study of energetic (34-50 keV) ion pitch-angle distributions (PADs) within 9 Re of earth provide evidence for an orderly pattern consistent with both drift-shell splitting and magnetopause shadowing. Normal ion PADs dominate the dayside and inner magnetosphere. Butterfly PADs typically occur in a narrow belt stretching from dusk to dawn through midnight, where they approach within 6 Re of earth. While those ion butterfly PADs that typically occur on closed drift paths are mainly caused by drift-shell splitting, there is also evidence for magnetopause shadowing in observations of more frequent butterfly PAD occurrence in the outer magnetosphere near dawn than dusk. Isotropic and gradient boundary PADs terminate the tailward extent of the butterfly ion PAD belt. 9 references

  18. Interplay between the bacterial nucleoid protein H-NS and macromolecular crowding in compacting DNA

    NARCIS (Netherlands)

    Wintraecken, C.H.J.M.

    2012-01-01

    In this dissertation we discuss H-NS and its connection to nucleoid compaction and organization. Nucleoid formation involves a dramatic reduction in coil volume of the genomic DNA. Four factors are thought to influence coil volume: supercoiling, DNA charge neutralization, macromolecular

  19. The acceleration and propagation of solar energetic particles

    International Nuclear Information System (INIS)

    Dalla, Silvia

    2004-01-01

    During flares and coronal mass ejections at the Sun, ions and electrons can be accelerated to high energies. They can escape from the solar corona into interplanetary space, and be detected by instruments on board spacecraft. This paper will review measurements of these solar energetic particles (SEPs) and models of their acceleration and propagation.It is generally agreed that SEP flux enhancements fall into two distinct classes: the so-called impulsive events, thought to originate in solar flares, and gradual events, thought to be the result of acceleration at the shock driven through the corona and interplanetary space by coronal mass ejections. A fundamental assumption of this model for SEPs is that particles' guiding centers propagate essentially parallel to the interplanetary magnetic field lines, and cross-field particle diffusion is negligible.The recent passage of the Ulysses spacecraft over the solar poles provided the first ever measurements of SEPs out of the ecliptic plane. Analysis of these data has revealed several fundamental differences with respect to the near-ecliptic measurements, such as large delays in particle arrival and in fluxes reaching their peak value. It will be shown that the current model of SEP acceleration and propagation does not account for the Ulysses results, which would more easily be explained by efficient cross-field diffusion of energetic particles

  20. DRIFT-INDUCED PERPENDICULAR TRANSPORT OF SOLAR ENERGETIC PARTICLES

    International Nuclear Information System (INIS)

    Marsh, M. S.; Dalla, S.; Kelly, J.; Laitinen, T.

    2013-01-01

    Drifts are known to play a role in galactic cosmic ray transport within the heliosphere and are a standard component of cosmic ray propagation models. However, the current paradigm of solar energetic particle (SEP) propagation holds the effects of drifts to be negligible, and they are not accounted for in most current SEP modeling efforts. We present full-orbit test particle simulations of SEP propagation in a Parker spiral interplanetary magnetic field (IMF), which demonstrate that high-energy particle drifts cause significant asymmetric propagation perpendicular to the IMF. Thus in many cases the assumption of field-aligned propagation of SEPs may not be valid. We show that SEP drifts have dependencies on energy, heliographic latitude, and charge-to-mass ratio that are capable of transporting energetic particles perpendicular to the field over significant distances within interplanetary space, e.g., protons of initial energy 100 MeV propagate distances across the field on the order of 1 AU, over timescales typical of a gradual SEP event. Our results demonstrate the need for current models of SEP events to include the effects of particle drift. We show that the drift is considerably stronger for heavy ion SEPs due to their larger mass-to-charge ratio. This paradigm shift has important consequences for the modeling of SEP events and is crucial to the understanding and interpretation of in situ observations