#### Sample records for efficient matlab computations

1. Efficient MATLAB computations with sparse and factored tensors.

Energy Technology Data Exchange (ETDEWEB)

Bader, Brett William; Kolda, Tamara Gibson (Sandia National Lab, Livermore, CA)

2006-12-01

In this paper, the term tensor refers simply to a multidimensional or N-way array, and we consider how specially structured tensors allow for efficient storage and computation. First, we study sparse tensors, which have the property that the vast majority of the elements are zero. We propose storing sparse tensors using coordinate format and describe the computational efficiency of this scheme for various mathematical operations, including those typical to tensor decomposition algorithms. Second, we study factored tensors, which have the property that they can be assembled from more basic components. We consider two specific types: a Tucker tensor can be expressed as the product of a core tensor (which itself may be dense, sparse, or factored) and a matrix along each mode, and a Kruskal tensor can be expressed as the sum of rank-1 tensors. We are interested in the case where the storage of the components is less than the storage of the full tensor, and we demonstrate that many elementary operations can be computed using only the components. All of the efficiencies described in this paper are implemented in the Tensor Toolbox for MATLAB.

2. Computational colour science using MATLAB

CERN Document Server

Westland, Stephen; Cheung, Vien

2012-01-01

Computational Colour Science Using MATLAB 2nd Edition offers a practical, problem-based approach to colour physics. The book focuses on the key issues encountered in modern colour engineering, including efficient representation of colour information, Fourier analysis of reflectance spectra and advanced colorimetric computation. Emphasis is placed on the practical applications rather than the techniques themselves, with material structured around key topics. These topics include colour calibration of visual displays, computer recipe prediction and models for colour-appearance prediction. Each t

3. Efficient Matlab Programs

Data.gov (United States)

National Aeronautics and Space Administration — Matlab has a reputation for running slowly. Here are some pointers on how to speed computations, to an often unexpected degree. Subjects currently covered: Matrix...

4. Accelerating MATLAB with GPU computing a primer with examples

CERN Document Server

Suh, Jung W

2013-01-01

Beyond simulation and algorithm development, many developers increasingly use MATLAB even for product deployment in computationally heavy fields. This often demands that MATLAB codes run faster by leveraging the distributed parallelism of Graphics Processing Units (GPUs). While MATLAB successfully provides high-level functions as a simulation tool for rapid prototyping, the underlying details and knowledge needed for utilizing GPUs make MATLAB users hesitate to step into it. Accelerating MATLAB with GPUs offers a primer on bridging this gap. Starting with the basics, setting up MATLAB for

5. Parallelizing AT with MatlabMPI

International Nuclear Information System (INIS)

2011-01-01

The Accelerator Toolbox (AT) is a high-level collection of tools and scripts specifically oriented toward solving problems dealing with computational accelerator physics. It is integrated into the MATLAB environment, which provides an accessible, intuitive interface for accelerator physicists, allowing researchers to focus the majority of their efforts on simulations and calculations, rather than programming and debugging difficulties. Efforts toward parallelization of AT have been put in place to upgrade its performance to modern standards of computing. We utilized the packages MatlabMPI and pMatlab, which were developed by MIT Lincoln Laboratory, to set up a message-passing environment that could be called within MATLAB, which set up the necessary pre-requisites for multithread processing capabilities. On local quad-core CPUs, we were able to demonstrate processor efficiencies of roughly 95% and speed increases of nearly 380%. By exploiting the efficacy of modern-day parallel computing, we were able to demonstrate incredibly efficient speed increments per processor in AT's beam-tracking functions. Extrapolating from prediction, we can expect to reduce week-long computation runtimes to less than 15 minutes. This is a huge performance improvement and has enormous implications for the future computing power of the accelerator physics group at SSRL. However, one of the downfalls of parringpass is its current lack of transparency; the pMatlab and MatlabMPI packages must first be well-understood by the user before the system can be configured to run the scripts. In addition, the instantiation of argument parameters requires internal modification of the source code. Thus, parringpass, cannot be directly run from the MATLAB command line, which detracts from its flexibility and user-friendliness. Future work in AT's parallelization will focus on development of external functions and scripts that can be called from within MATLAB and configured on multiple nodes, while

6. Elements of matrix modeling and computing with Matlab

CERN Document Server

White, Robert E

2006-01-01

As discrete models and computing have become more common, there is a need to study matrix computation and numerical linear algebra. Encompassing a diverse mathematical core, Elements of Matrix Modeling and Computing with MATLAB examines a variety of applications and their modeling processes, showing you how to develop matrix models and solve algebraic systems. Emphasizing practical skills, it creates a bridge from problems with two and three variables to more realistic problems that have additional variables. Elements of Matrix Modeling and Computing with MATLAB focuses on seven basic applicat

7. Elementary mathematical and computational tools for electrical and computer engineers using Matlab

CERN Document Server

Manassah, Jamal T

2013-01-01

Ideal for use as a short-course textbook and for self-study Elementary Mathematical and Computational Tools for Electrical and Computer Engineers Using MATLAB fills that gap. Accessible after just one semester of calculus, it introduces the many practical analytical and numerical tools that are essential to success both in future studies and in professional life. Sharply focused on the needs of the electrical and computer engineering communities, the text provides a wealth of relevant exercises and design problems. Changes in MATLAB's version 6.0 are included in a special addendum.

8. Introduction to Numerical Computation - analysis and Matlab illustrations

DEFF Research Database (Denmark)

Elden, Lars; Wittmeyer-Koch, Linde; Nielsen, Hans Bruun

In a modern programming environment like eg MATLAB it is possible by simple commands to perform advanced calculations on a personal computer. In order to use such a powerful tool efiiciently it is necessary to have an overview of available numerical methods and algorithms and to know about...... are illustrated by examples in MATLAB....

9. Parallel Sequential Monte Carlo for Efficient Density Combination: The Deco Matlab Toolbox

DEFF Research Database (Denmark)

Casarin, Roberto; Grassi, Stefano; Ravazzolo, Francesco

This paper presents the Matlab package DeCo (Density Combination) which is based on the paper by Billio et al. (2013) where a constructive Bayesian approach is presented for combining predictive densities originating from different models or other sources of information. The combination weights...... for standard CPU computing and for Graphical Process Unit (GPU) parallel computing. For the GPU implementation we use the Matlab parallel computing toolbox and show how to use General Purposes GPU computing almost effortless. This GPU implementation comes with a speed up of the execution time up to seventy...... times compared to a standard CPU Matlab implementation on a multicore CPU. We show the use of the package and the computational gain of the GPU version, through some simulation experiments and empirical applications....

10. Scientific computing an introduction using Maple and Matlab

CERN Document Server

Gander, Walter; Kwok, Felix

2014-01-01

Scientific computing is the study of how to use computers effectively to solve problems that arise from the mathematical modeling of phenomena in science and engineering. It is based on mathematics, numerical and symbolic/algebraic computations and visualization. This book serves as an introduction to both the theory and practice of scientific computing, with each chapter presenting the basic algorithms that serve as the workhorses of many scientific codes; we explain both the theory behind these algorithms and how they must be implemented in order to work reliably in finite-precision arithmetic. The book includes many programs written in Matlab and Maple – Maple is often used to derive numerical algorithms, whereas Matlab is used to implement them. The theory is developed in such a way that students can learn by themselves as they work through the text. Each chapter contains numerous examples and problems to help readers understand the material “hands-on”.

11. Matlab for dummies

CERN Document Server

Sizemore, Jim

2014-01-01

Plot graphs, solve equations, and write code in a flash! If you work in a STEM field, chances are you'll be using MATLAB on a daily basis. MATLAB is a popular and powerful computational tool and this book provides everything you need to start manipulating and plotting your data. MATLAB has rapidly become the premier data tool, and MATLAB For Dummies is a comprehensive guide to the fundamentals. MATLAB For Dummies guides you through this complex computational language from installation to visualization to automation.Learn MATLAB's language fundamentals including syntax, operators, and data type

12. Matlab for electrical and computer engineering students and professionals with Simulink

CERN Document Server

Priemer, Roland

2013-01-01

This book combines the teaching of the MATLAB#65533; programming language with the presentation and development of carefully selected electrical and computer engineering (ECE) fundamentals. This is what distinguishes it from other books concerned with MATLAB#65533;: it is directed specifically to ECE concerns.

13. Computational mathematics models, methods, and analysis with Matlab and MPI

CERN Document Server

White, Robert E

2004-01-01

Computational Mathematics: Models, Methods, and Analysis with MATLAB and MPI explores and illustrates this process. Each section of the first six chapters is motivated by a specific application. The author applies a model, selects a numerical method, implements computer simulations, and assesses the ensuing results. These chapters include an abundance of MATLAB code. By studying the code instead of using it as a "black box, " you take the first step toward more sophisticated numerical modeling. The last four chapters focus on multiprocessing algorithms implemented using message passing interface (MPI). These chapters include Fortran 9x codes that illustrate the basic MPI subroutines and revisit the applications of the previous chapters from a parallel implementation perspective. All of the codes are available for download from www4.ncsu.edu./~white.This book is not just about math, not just about computing, and not just about applications, but about all three--in other words, computational science. Whether us...

14. Performance evaluation for volumetric segmentation of multiple sclerosis lesions using MATLAB and computing engine in the graphical processing unit (GPU)

Science.gov (United States)

Le, Anh H.; Park, Young W.; Ma, Kevin; Jacobs, Colin; Liu, Brent J.

2010-03-01

Multiple Sclerosis (MS) is a progressive neurological disease affecting myelin pathways in the brain. Multiple lesions in the white matter can cause paralysis and severe motor disabilities of the affected patient. To solve the issue of inconsistency and user-dependency in manual lesion measurement of MRI, we have proposed a 3-D automated lesion quantification algorithm to enable objective and efficient lesion volume tracking. The computer-aided detection (CAD) of MS, written in MATLAB, utilizes K-Nearest Neighbors (KNN) method to compute the probability of lesions on a per-voxel basis. Despite the highly optimized algorithm of imaging processing that is used in CAD development, MS CAD integration and evaluation in clinical workflow is technically challenging due to the requirement of high computation rates and memory bandwidth in the recursive nature of the algorithm. In this paper, we present the development and evaluation of using a computing engine in the graphical processing unit (GPU) with MATLAB for segmentation of MS lesions. The paper investigates the utilization of a high-end GPU for parallel computing of KNN in the MATLAB environment to improve algorithm performance. The integration is accomplished using NVIDIA's CUDA developmental toolkit for MATLAB. The results of this study will validate the practicality and effectiveness of the prototype MS CAD in a clinical setting. The GPU method may allow MS CAD to rapidly integrate in an electronic patient record or any disease-centric health care system.

15. Estimating aquifer transmissivity from specific capacity using MATLAB.

Science.gov (United States)

McLin, Stephen G

2005-01-01

Historically, specific capacity information has been used to calculate aquifer transmissivity when pumping test data are unavailable. This paper presents a simple computer program written in the MATLAB programming language that estimates transmissivity from specific capacity data while correcting for aquifer partial penetration and well efficiency. The program graphically plots transmissivity as a function of these factors so that the user can visually estimate their relative importance in a particular application. The program is compatible with any computer operating system running MATLAB, including Windows, Macintosh OS, Linux, and Unix. Two simple examples illustrate program usage.

16. Scientific computing with MATLAB and Octave

CERN Document Server

Quarteroni, Alfio; Gervasio, Paola

2014-01-01

This textbook is an introduction to Scientific Computing, in which several numerical methods for the computer-based solution of certain classes of mathematical problems are illustrated. The authors show how to compute the zeros, the extrema, and the integrals of continuous functions, solve linear systems, approximate functions using polynomials and construct accurate approximations for the solution of ordinary and partial differential equations. To make the format concrete and appealing, the programming environments Matlab and Octave are adopted as faithful companions. The book contains the solutions to several problems posed in exercises and examples, often originating from important applications. At the end of each chapter, a specific section is devoted to subjects which were not addressed in the book and contains bibliographical references for a more comprehensive treatment of the material. From the review: ".... This carefully written textbook, the third English edition, contains substantial new developme...

17. An introduction to MATLAB.

Science.gov (United States)

Sobie, Eric A

2011-09-13

This two-part lecture introduces students to the scientific computing language MATLAB. Prior computer programming experience is not required. The lectures present basic concepts of computer programming logic that tend to cause difficulties for beginners in addition to concepts that relate specifically to the MATLAB language syntax. The lectures begin with a discussion of vectors, matrices, and arrays. Because many types of biological data, such as fluorescence images and DNA microarrays, are stored as two-dimensional objects, processing these data is a form of array manipulation, and MATLAB is especially adept at handling such array objects. The students are introduced to basic commands in MATLAB, as well as built-in functions that provide useful shortcuts. The second lecture focuses on the differences between MATLAB scripts and MATLAB functions and describes when one method of programming organization might be preferable to the other. The principles are illustrated through the analysis of experimental data, specifically measurements of intracellular calcium concentration in live cells obtained using confocal microscopy.

18. DACE - A Matlab Kriging Toolbox

DEFF Research Database (Denmark)

2002-01-01

DACE, Design and Analysis of Computer Experiments, is a Matlab toolbox for working with kriging approximations to computer models.......DACE, Design and Analysis of Computer Experiments, is a Matlab toolbox for working with kriging approximations to computer models....

19. Parallel Computation of the Jacobian Matrix for Nonlinear Equation Solvers Using MATLAB

Science.gov (United States)

Rose, Geoffrey K.; Nguyen, Duc T.; Newman, Brett A.

2017-01-01

Demonstrating speedup for parallel code on a multicore shared memory PC can be challenging in MATLAB due to underlying parallel operations that are often opaque to the user. This can limit potential for improvement of serial code even for the so-called embarrassingly parallel applications. One such application is the computation of the Jacobian matrix inherent to most nonlinear equation solvers. Computation of this matrix represents the primary bottleneck in nonlinear solver speed such that commercial finite element (FE) and multi-body-dynamic (MBD) codes attempt to minimize computations. A timing study using MATLAB's Parallel Computing Toolbox was performed for numerical computation of the Jacobian. Several approaches for implementing parallel code were investigated while only the single program multiple data (spmd) method using composite objects provided positive results. Parallel code speedup is demonstrated but the goal of linear speedup through the addition of processors was not achieved due to PC architecture.

20. Matlab linear algebra

CERN Document Server

Lopez, Cesar

2014-01-01

MATLAB is a high-level language and environment for numerical computation, visualization, and programming. Using MATLAB, you can analyze data, develop algorithms, and create models and applications. The language, tools, and built-in math functions enable you to explore multiple approaches and reach a solution faster than with spreadsheets or traditional programming languages, such as C/C++ or Java. MATLAB Linear Algebra introduces you to the MATLAB language with practical hands-on instructions and results, allowing you to quickly achieve your goals. In addition to giving an introduction to

1. mGrid: A load-balanced distributed computing environment for the remote execution of the user-defined Matlab code

Directory of Open Access Journals (Sweden)

Almeida Jonas S

2006-03-01

Full Text Available Abstract Background Matlab, a powerful and productive language that allows for rapid prototyping, modeling and simulation, is widely used in computational biology. Modeling and simulation of large biological systems often require more computational resources then are available on a single computer. Existing distributed computing environments like the Distributed Computing Toolbox, MatlabMPI, Matlab*G and others allow for the remote (and possibly parallel execution of Matlab commands with varying support for features like an easy-to-use application programming interface, load-balanced utilization of resources, extensibility over the wide area network, and minimal system administration skill requirements. However, all of these environments require some level of access to participating machines to manually distribute the user-defined libraries that the remote call may invoke. Results mGrid augments the usual process distribution seen in other similar distributed systems by adding facilities for user code distribution. mGrid's client-side interface is an easy-to-use native Matlab toolbox that transparently executes user-defined code on remote machines (i.e. the user is unaware that the code is executing somewhere else. Run-time variables are automatically packed and distributed with the user-defined code and automated load-balancing of remote resources enables smooth concurrent execution. mGrid is an open source environment. Apart from the programming language itself, all other components are also open source, freely available tools: light-weight PHP scripts and the Apache web server. Conclusion Transparent, load-balanced distribution of user-defined Matlab toolboxes and rapid prototyping of many simple parallel applications can now be done with a single easy-to-use Matlab command. Because mGrid utilizes only Matlab, light-weight PHP scripts and the Apache web server, installation and configuration are very simple. Moreover, the web

2. mGrid: a load-balanced distributed computing environment for the remote execution of the user-defined Matlab code.

Science.gov (United States)

Karpievitch, Yuliya V; Almeida, Jonas S

2006-03-15

Matlab, a powerful and productive language that allows for rapid prototyping, modeling and simulation, is widely used in computational biology. Modeling and simulation of large biological systems often require more computational resources then are available on a single computer. Existing distributed computing environments like the Distributed Computing Toolbox, MatlabMPI, Matlab*G and others allow for the remote (and possibly parallel) execution of Matlab commands with varying support for features like an easy-to-use application programming interface, load-balanced utilization of resources, extensibility over the wide area network, and minimal system administration skill requirements. However, all of these environments require some level of access to participating machines to manually distribute the user-defined libraries that the remote call may invoke. mGrid augments the usual process distribution seen in other similar distributed systems by adding facilities for user code distribution. mGrid's client-side interface is an easy-to-use native Matlab toolbox that transparently executes user-defined code on remote machines (i.e. the user is unaware that the code is executing somewhere else). Run-time variables are automatically packed and distributed with the user-defined code and automated load-balancing of remote resources enables smooth concurrent execution. mGrid is an open source environment. Apart from the programming language itself, all other components are also open source, freely available tools: light-weight PHP scripts and the Apache web server. Transparent, load-balanced distribution of user-defined Matlab toolboxes and rapid prototyping of many simple parallel applications can now be done with a single easy-to-use Matlab command. Because mGrid utilizes only Matlab, light-weight PHP scripts and the Apache web server, installation and configuration are very simple. Moreover, the web-based infrastructure of mGrid allows for it to be easily extensible over

3. MATLAB matrix algebra

CERN Document Server

Pérez López, César

2014-01-01

MATLAB is a high-level language and environment for numerical computation, visualization, and programming. Using MATLAB, you can analyze data, develop algorithms, and create models and applications. The language, tools, and built-in math functions enable you to explore multiple approaches and reach a solution faster than with spreadsheets or traditional programming languages, such as C/C++ or Java. MATLAB Matrix Algebra introduces you to the MATLAB language with practical hands-on instructions and results, allowing you to quickly achieve your goals. Starting with a look at symbolic and numeric variables, with an emphasis on vector and matrix variables, you will go on to examine functions and operations that support vectors and matrices as arguments, including those based on analytic parent functions. Computational methods for finding eigenvalues and eigenvectors of matrices are detailed, leading to various matrix decompositions. Applications such as change of bases, the classification of quadratic forms and ...

4. Solving applied mathematical problems with Matlab

CERN Document Server

Xue, Dingyu

2008-01-01

Computer Mathematics Language-An Overview. Fundamentals of MATLAB Programming. Calculus Problems. MATLAB Computations of Linear Algebra Problems. Integral Transforms and Complex Variable Functions. Solutions to Nonlinear Equations and Optimization Problems. MATLAB Solutions to Differential Equation Problems. Solving Interpolations and Approximations Problems. Solving Probability and Mathematical Statistics Problems. Nontraditional Solution Methods for Mathematical Problems.

5. Matlab laser toolbox

NARCIS (Netherlands)

Römer, Gerardus Richardus, Bernardus, Engelina; Huis in 't Veld, Bert; Schmidt, M.; Vollertsen, F.; Geiger, M.

2010-01-01

Matlab® is a program for numeric computation, simulation and visualization, developed by The Mathworks, Inc. It is used heavily in education, research, and industry, for solving general, as well as application area-specific problems, that arise in various disciplines. For this purpose Matlab has

6. The Matlab Syntax

DEFF Research Database (Denmark)

Jørgensen, Jakob Heide; Skajaa, Anders

Matlab (MATrix LABoratory) is one of the most widely used programming environments for numerical computations and simulations in the technical sciences. The reason is that Matlab makes it easy to get started as well as to construct advanced programs. This book is a practical guide to understanding...... and using Matlab. It works as a quick reference for anyone who is starting to use Matlab for example while enrolled in university studies. For this reason, the book is limited to covering what is typically used by a university student and is designed as a reference of the syntax including plenty of examples....... While the primary audience of the book is university students, it is well suited for anyone who wants to become acquainted with Matlab....

7. Enhancing Student Writing and Computer Programming with LATEX and MATLAB in Multivariable Calculus

Science.gov (United States)

Sullivan, Eric; Melvin, Timothy

2016-01-01

Written communication and computer programming are foundational components of an undergraduate degree in the mathematical sciences. All lower-division mathematics courses at our institution are paired with computer-based writing, coding, and problem-solving activities. In multivariable calculus we utilize MATLAB and LATEX to have students explore…

8. Solution of the reactor point kinetics equations by MATLAB computing

Directory of Open Access Journals (Sweden)

Singh Sudhansu S.

2015-01-01

Full Text Available The numerical solution of the point kinetics equations in the presence of Newtonian temperature feedback has been a challenging issue for analyzing the reactor transients. Reactor point kinetics equations are a system of stiff ordinary differential equations which need special numerical treatments. Although a plethora of numerical intricacies have been introduced to solve the point kinetics equations over the years, some of the simple and straightforward methods still work very efficiently with extraordinary accuracy. As an example, it has been shown recently that the fundamental backward Euler finite difference algorithm with its simplicity has proven to be one of the most effective legacy methods. Complementing the back-ward Euler finite difference scheme, the present work demonstrates the application of ordinary differential equation suite available in the MATLAB software package to solve the stiff reactor point kinetics equations with Newtonian temperature feedback effects very effectively by analyzing various classic benchmark cases. Fair accuracy of the results implies the efficient application of MATLAB ordinary differential equation suite for solving the reactor point kinetics equations as an alternate method for future applications.

9. A MATLAB companion for multivariable calculus

CERN Document Server

Cooper, Jeffery

2001-01-01

Offering a concise collection of MatLab programs and exercises to accompany a third semester course in multivariable calculus, A MatLab Companion for Multivariable Calculus introduces simple numerical procedures such as numerical differentiation, numerical integration and Newton''s method in several variables, thereby allowing students to tackle realistic problems. The many examples show students how to use MatLab effectively and easily in many contexts. Numerous exercises in mathematics and applications areas are presented, graded from routine to more demanding projects requiring some programming. Matlab M-files are provided on the Harcourt/Academic Press web site at http://www.harcourt-ap.com/matlab.html.* Computer-oriented material that complements the essential topics in multivariable calculus* Main ideas presented with examples of computations and graphics displays using MATLAB * Numerous examples of short code in the text, which can be modified for use with the exercises* MATLAB files are used to implem...

10. Accelerating Computation of DCM for ERP in MATLAB by External Function Calls to the GPU

Science.gov (United States)

Wang, Wei-Jen; Hsieh, I-Fan; Chen, Chun-Chuan

2013-01-01

This study aims to improve the performance of Dynamic Causal Modelling for Event Related Potentials (DCM for ERP) in MATLAB by using external function calls to a graphics processing unit (GPU). DCM for ERP is an advanced method for studying neuronal effective connectivity. DCM utilizes an iterative procedure, the expectation maximization (EM) algorithm, to find the optimal parameters given a set of observations and the underlying probability model. As the EM algorithm is computationally demanding and the analysis faces possible combinatorial explosion of models to be tested, we propose a parallel computing scheme using the GPU to achieve a fast estimation of DCM for ERP. The computation of DCM for ERP is dynamically partitioned and distributed to threads for parallel processing, according to the DCM model complexity and the hardware constraints. The performance efficiency of this hardware-dependent thread arrangement strategy was evaluated using the synthetic data. The experimental data were used to validate the accuracy of the proposed computing scheme and quantify the time saving in practice. The simulation results show that the proposed scheme can accelerate the computation by a factor of 155 for the parallel part. For experimental data, the speedup factor is about 7 per model on average, depending on the model complexity and the data. This GPU-based implementation of DCM for ERP gives qualitatively the same results as the original MATLAB implementation does at the group level analysis. In conclusion, we believe that the proposed GPU-based implementation is very useful for users as a fast screen tool to select the most likely model and may provide implementation guidance for possible future clinical applications such as online diagnosis. PMID:23840507

11. Learning Matlab a problem solving approach

CERN Document Server

Gander, Walter

2015-01-01

This comprehensive and stimulating introduction to Matlab, a computer language now widely used for technical computing, is based on an introductory course held at Qian Weichang College, Shanghai University, in the fall of 2014.  Teaching and learning a substantial programming language aren’t always straightforward tasks. Accordingly, this textbook is not meant to cover the whole range of this high-performance technical programming environment, but to motivate first- and second-year undergraduate students in mathematics and computer science to learn Matlab by studying representative problems, developing algorithms and programming them in Matlab. While several topics are taken from the field of scientific computing, the main emphasis is on programming. A wealth of examples are completely discussed and solved, allowing students to learn Matlab by doing: by solving problems, comparing approaches and assessing the proposed solutions.

12. Programming for computations MATLAB/Octave : a gentle introduction to numerical simulations with MATLAB/Octave

CERN Document Server

Linge, Svein

2016-01-01

This book presents computer programming as a key method for solving mathematical problems. There are two versions of the book, one for MATLAB and one for Python. The book was inspired by the Springer book TCSE 6: A Primer on Scientific Programming with Python (by Langtangen), but the style is more accessible and concise, in keeping with the needs of engineering students. The book outlines the shortest possible path from no previous experience with programming to a set of skills that allows the students to write simple programs for solving common mathematical problems with numerical methods in engineering and science courses. The emphasis is on generic algorithms, clean design of programs, use of functions, and automatic tests for verification.

13. The GMT/MATLAB Toolbox

Science.gov (United States)

Wessel, Paul; Luis, Joaquim F.

2017-02-01

The GMT/MATLAB toolbox is a basic interface between MATLAB® (or Octave) and GMT, the Generic Mapping Tools, which allows MATLAB users full access to all GMT modules. Data may be passed between the two programs using intermediate MATLAB structures that organize the metadata needed; these are produced when GMT modules are run. In addition, standard MATLAB matrix data can be used directly as input to GMT modules. The toolbox improves interoperability between two widely used tools in the geosciences and extends the capability of both tools: GMT gains access to the powerful computational capabilities of MATLAB while the latter gains the ability to access specialized gridding algorithms and can produce publication-quality PostScript-based illustrations. The toolbox is available on all platforms and may be downloaded from the GMT website.

14. Gro2mat: a package to efficiently read gromacs output in MATLAB.

Science.gov (United States)

Dien, Hung; Deane, Charlotte M; Knapp, Bernhard

2014-07-30

Molecular dynamics (MD) simulations are a state-of-the-art computational method used to investigate molecular interactions at atomic scale. Interaction processes out of experimental reach can be monitored using MD software, such as Gromacs. Here, we present the gro2mat package that allows fast and easy access to Gromacs output files from Matlab. Gro2mat enables direct parsing of the most common Gromacs output formats including the binary xtc-format. No openly available Matlab parser currently exists for this format. The xtc reader is orders of magnitudes faster than other available pdb/ascii workarounds. Gro2mat is especially useful for scientists with an interest in quick prototyping of new mathematical and statistical approaches for Gromacs trajectory analyses. © 2014 Wiley Periodicals, Inc. Copyright © 2014 Wiley Periodicals, Inc.

15. Matlab differential and integral calculus

CERN Document Server

Lopez, Cesar

2014-01-01

MATLAB is a high-level language and environment for numerical computation, visualization, and programming. Using MATLAB, you can analyze data, develop algorithms, and create models and applications. The language, tools, and built-in math functions enable you to explore multiple approaches and reach a solution faster than with spreadsheets or traditional programming languages, such as C/C++ or Java. MATLAB Differential and Integral Calculus introduces you to the MATLAB language with practical hands-on instructions and results, allowing you to quickly achieve your goals. In addition to givi

16. Matlab programming for numerical analysis

CERN Document Server

Lopez, Cesar

2014-01-01

MATLAB is a high-level language and environment for numerical computation, visualization, and programming. Using MATLAB, you can analyze data, develop algorithms, and create models and applications. The language, tools, and built-in math functions enable you to explore multiple approaches and reach a solution faster than with spreadsheets or traditional programming languages, such as C/C++ or Java. Programming MATLAB for Numerical Analysis introduces you to the MATLAB language with practical hands-on instructions and results, allowing you to quickly achieve your goals. You will first become

17. Matlab for engineers explained

CERN Document Server

Gustafsson, Fredrik

2003-01-01

This book is written for students at bachelor and master programs and has four different purposes, which split the book into four parts: 1. To teach first or early year undergraduate engineering students basic knowledge in technical computations and programming using MATLAB. The first part starts from first principles and is therefore well suited both for readers with prior exposure to MATLAB but lacking a solid foundational knowledge of the capabilities of the system and readers not having any previous experience with MATLAB. The foundational knowledge gained from these interactive guided tours of the system will hopefully be sufficient for an effective utilization of MATLAB in the engineering profession, in education and in research. 2. To explain the foundations of more advanced use of MATLAB using the facilities added the last couple of years, such as extended data structures, object orientation and advanced graphics. 3. To give an introduction to the use of MATLAB in typical undergraduate courses in elec...

18. Matpar: Parallel Extensions for MATLAB

Science.gov (United States)

Springer, P. L.

1998-01-01

Matpar is a set of client/server software that allows a MATLAB user to take advantage of a parallel computer for very large problems. The user can replace calls to certain built-in MATLAB functions with calls to Matpar functions.

19. An introduction to differential equations using MATLAB

CERN Document Server

Butt, Rizwan

2016-01-01

An Introduction to Differential Equations using MATLAB exploits the symbolic, numerical, and graphical capabilitiesof MATLAB to develop a thorough understanding of differential equations algorithms. This book provides the readerwith numerous applications, m-files, and practical examples to problems. Balancing theoretical concepts withcomputational speed and accuracy, the book includes numerous short programs in MATLAB that can be used to solveproblems involving first-and higher-order differential equations, Laplace transforms, linear systems of differentialequations, numerical solutions of differential equations, computer graphics, and more. The author emphasizes thebasic ideas of analytical and numerical techniques and the uses of modern mathematical software (MATLAB) ratherthan relying only on complex mathematical derivations to engineers, mathematician, computer scientists, andphysicists or for use as a textbook in applied or computational courses.A CD-ROM with all the figures, codes, solutions, appendices...

20. Efficient topology optimization in MATLAB using 88 lines of code

DEFF Research Database (Denmark)

Andreassen, Erik; Clausen, Anders; Schevenels, Mattias

2011-01-01

The paper presents an efficient 88 line MATLAB code for topology optimization. It has been developed using the 99 line code presented by Sigmund (Struct Multidisc Optim 21(2):120–127, 2001) as a starting point. The original code has been extended by a density filter, and a considerable improvemen...... of the basic code to include recent PDE-based and black-and-white projection filtering methods. The complete 88 line code is included as an appendix and can be downloaded from the web site www.topopt.dtu.dk....

1. The Dynamo package for tomography and subtomogram averaging: components for MATLAB, GPU computing and EC2 Amazon Web Services.

Science.gov (United States)

Castaño-Díez, Daniel

2017-06-01

Dynamo is a package for the processing of tomographic data. As a tool for subtomogram averaging, it includes different alignment and classification strategies. Furthermore, its data-management module allows experiments to be organized in groups of tomograms, while offering specialized three-dimensional tomographic browsers that facilitate visualization, location of regions of interest, modelling and particle extraction in complex geometries. Here, a technical description of the package is presented, focusing on its diverse strategies for optimizing computing performance. Dynamo is built upon mbtools (middle layer toolbox), a general-purpose MATLAB library for object-oriented scientific programming specifically developed to underpin Dynamo but usable as an independent tool. Its structure intertwines a flexible MATLAB codebase with precompiled C++ functions that carry the burden of numerically intensive operations. The package can be delivered as a precompiled standalone ready for execution without a MATLAB license. Multicore parallelization on a single node is directly inherited from the high-level parallelization engine provided for MATLAB, automatically imparting a balanced workload among the threads in computationally intense tasks such as alignment and classification, but also in logistic-oriented tasks such as tomogram binning and particle extraction. Dynamo supports the use of graphical processing units (GPUs), yielding considerable speedup factors both for native Dynamo procedures (such as the numerically intensive subtomogram alignment) and procedures defined by the user through its MATLAB-based GPU library for three-dimensional operations. Cloud-based virtual computing environments supplied with a pre-installed version of Dynamo can be publicly accessed through the Amazon Elastic Compute Cloud (EC2), enabling users to rent GPU computing time on a pay-as-you-go basis, thus avoiding upfront investments in hardware and longterm software maintenance.

2. MatLab Script and Functional Programming

Science.gov (United States)

Shaykhian, Gholam Ali

2007-01-01

MatLab Script and Functional Programming: MatLab is one of the most widely used very high level programming languages for scientific and engineering computations. It is very user-friendly and needs practically no formal programming knowledge. Presented here are MatLab programming aspects and not just the MatLab commands for scientists and engineers who do not have formal programming training and also have no significant time to spare for learning programming to solve their real world problems. Specifically provided are programs for visualization. The MatLab seminar covers the functional and script programming aspect of MatLab language. Specific expectations are: a) Recognize MatLab commands, script and function. b) Create, and run a MatLab function. c) Read, recognize, and describe MatLab syntax. d) Recognize decisions, loops and matrix operators. e) Evaluate scope among multiple files, and multiple functions within a file. f) Declare, define and use scalar variables, vectors and matrices.

3. OMPC: an Open-Source MATLAB-to-Python Compiler.

Science.gov (United States)

Jurica, Peter; van Leeuwen, Cees

2009-01-01

Free access to scientific information facilitates scientific progress. Open-access scientific journals are a first step in this direction; a further step is to make auxiliary and supplementary materials that accompany scientific publications, such as methodological procedures and data-analysis tools, open and accessible to the scientific community. To this purpose it is instrumental to establish a software base, which will grow toward a comprehensive free and open-source language of technical and scientific computing. Endeavors in this direction are met with an important obstacle. MATLAB((R)), the predominant computation tool in many fields of research, is a closed-source commercial product. To facilitate the transition to an open computation platform, we propose Open-source MATLAB((R))-to-Python Compiler (OMPC), a platform that uses syntax adaptation and emulation to allow transparent import of existing MATLAB((R)) functions into Python programs. The imported MATLAB((R)) modules will run independently of MATLAB((R)), relying on Python's numerical and scientific libraries. Python offers a stable and mature open source platform that, in many respects, surpasses commonly used, expensive commercial closed source packages. The proposed software will therefore facilitate the transparent transition towards a free and general open-source lingua franca for scientific computation, while enabling access to the existing methods and algorithms of technical computing already available in MATLAB((R)). OMPC is available at http://ompc.juricap.com.

4. A Series of Computational Neuroscience Labs Increases Comfort with MATLAB.

Science.gov (United States)

Nichols, David F

2015-01-01

Computational simulations allow for a low-cost, reliable means to demonstrate complex and often times inaccessible concepts to undergraduates. However, students without prior computer programming training may find working with code-based simulations to be intimidating and distracting. A series of computational neuroscience labs involving the Hodgkin-Huxley equations, an Integrate-and-Fire model, and a Hopfield Memory network were used in an undergraduate neuroscience laboratory component of an introductory level course. Using short focused surveys before and after each lab, student comfort levels were shown to increase drastically from a majority of students being uncomfortable or with neutral feelings about working in the MATLAB environment to a vast majority of students being comfortable working in the environment. Though change was reported within each lab, a series of labs was necessary in order to establish a lasting high level of comfort. Comfort working with code is important as a first step in acquiring computational skills that are required to address many questions within neuroscience.

5. MATLAB Software Versions and Licenses for the Peregrine System |

Science.gov (United States)

High-Performance Computing | NREL MATLAB Software Versions and Licenses for the Peregrine System MATLAB Software Versions and Licenses for the Peregrine System Learn about the MATLAB software Peregrine is R2017b. Licenses MATLAB is proprietary software. As such, users have access to a limited number

6. System design through Matlab, control toolbox and Simulink

CERN Document Server

Singh, Krishna K

2001-01-01

MATLAB , a software package developed by Math Works, Inc. is powerful, versatile and interactive software for scientific and technical computations including simulations. Specialised toolboxes provided with several built-in functions are a special feature of MATLAB . This book titled System Design through MATLAB , Control Toolbox and SIMULINK aims at getting the reader started with computations and simulations in system engineering quickly and easily and then proceeds to build concepts for advanced computations and simulations that includes the control and compensation of systems. Simulation through SIMULINK has also been described to allow the reader to get the feel of the real world situation. This book is appropriate for undergraduate students undergoing final semester of their project work, postgraduate students who have MATLAB integrated in their course or wish to take up simulation problem in the area of system engineering for their dissertation work and research scholars for whom MATLABÊ

7. MBEToolbox: a Matlab toolbox for sequence data analysis in molecular biology and evolution

Directory of Open Access Journals (Sweden)

Xia Xuhua

2005-03-01

Full Text Available Abstract Background MATLAB is a high-performance language for technical computing, integrating computation, visualization, and programming in an easy-to-use environment. It has been widely used in many areas, such as mathematics and computation, algorithm development, data acquisition, modeling, simulation, and scientific and engineering graphics. However, few functions are freely available in MATLAB to perform the sequence data analyses specifically required for molecular biology and evolution. Results We have developed a MATLAB toolbox, called MBEToolbox, aimed at filling this gap by offering efficient implementations of the most needed functions in molecular biology and evolution. It can be used to manipulate aligned sequences, calculate evolutionary distances, estimate synonymous and nonsynonymous substitution rates, and infer phylogenetic trees. Moreover, it provides an extensible, functional framework for users with more specialized requirements to explore and analyze aligned nucleotide or protein sequences from an evolutionary perspective. The full functions in the toolbox are accessible through the command-line for seasoned MATLAB users. A graphical user interface, that may be especially useful for non-specialist end users, is also provided. Conclusion MBEToolbox is a useful tool that can aid in the exploration, interpretation and visualization of data in molecular biology and evolution. The software is publicly available at http://web.hku.hk/~jamescai/mbetoolbox/ and http://bioinformatics.org/project/?group_id=454.

8. Accelerator Toolbox for MATLAB

International Nuclear Information System (INIS)

Terebilo, Andrei

2001-01-01

This paper introduces Accelerator Toolbox (AT)--a collection of tools to model particle accelerators and beam transport lines in the MATLAB environment. At SSRL, it has become the modeling code of choice for the ongoing design and future operation of the SPEAR 3 synchrotron light source. AT was designed to take advantage of power and simplicity of MATLAB--commercially developed environment for technical computing and visualization. Many examples in this paper illustrate the advantages of the AT approach and contrast it with existing accelerator code frameworks

9. Increasing the computational efficient of digital cross correlation by a vectorization method

Science.gov (United States)

Chang, Ching-Yuan; Ma, Chien-Ching

2017-08-01

This study presents a vectorization method for use in MATLAB programming aimed at increasing the computational efficiency of digital cross correlation in sound and images, resulting in a speedup of 6.387 and 36.044 times compared with performance values obtained from looped expression. This work bridges the gap between matrix operations and loop iteration, preserving flexibility and efficiency in program testing. This paper uses numerical simulation to verify the speedup of the proposed vectorization method as well as experiments to measure the quantitative transient displacement response subjected to dynamic impact loading. The experiment involved the use of a high speed camera as well as a fiber optic system to measure the transient displacement in a cantilever beam under impact from a steel ball. Experimental measurement data obtained from the two methods are in excellent agreement in both the time and frequency domain, with discrepancies of only 0.68%. Numerical and experiment results demonstrate the efficacy of the proposed vectorization method with regard to computational speed in signal processing and high precision in the correlation algorithm. We also present the source code with which to build MATLAB-executable functions on Windows as well as Linux platforms, and provide a series of examples to demonstrate the application of the proposed vectorization method.

10. Accelerator Modeling with MATLAB Accelerator Toolbox

International Nuclear Information System (INIS)

2002-01-01

This paper introduces Accelerator Toolbox (AT)--a collection of tools to model storage rings and beam transport lines in the MATLAB environment. The objective is to illustrate the flexibility and efficiency of the AT-MATLAB framework. The paper discusses three examples of problems that are analyzed frequently in connection with ring-based synchrotron light sources

11. Linear algebra applications using Matlab software

Directory of Open Access Journals (Sweden)

Cornelia Victoria Anghel

2005-10-01

Full Text Available The paper presents two ways of special matrix generating using some functions included in the MatLab software package. The MatLab software package contains a set of functions that generate special matrixes used in the linear algebra applications and the signal processing from different activity fields. The paper presents two tipes of special matrixes that can be generated using written sintaxes in the dialog window of the MatLab software and for the command validity we need to press the Enter task. The applications presented in the paper represent eamples of numerical calculus using the MatLab software and belong to the scientific field „Computer Assisted Mathematics” thus creating the symbiosis between mathematics and informatics.

12. System Simulation of Nuclear Power Plant by Coupling RELAP5 and Matlab/Simulink

International Nuclear Information System (INIS)

Meng Lin; Dong Hou; Zhihong Xu; Yanhua Yang; Ronghua Zhang

2006-01-01

Since RELAP5 code has general and advanced features in thermal-hydraulic computation, it has been widely used in transient and accident safety analysis, experiment planning analysis, and system simulation, etc. So we wish to design, analyze, verify a new Instrumentation And Control (I and C) system of Nuclear Power Plant (NPP) based on the best-estimated code, and even develop our engineering simulator. But because of limited function of simulating control and protection system in RELAP5, it is necessary to expand the function for high efficient, accurate, flexible design and simulation of I and C system. Matlab/Simulink, a scientific computation software, just can compensate the limitation, which is a powerful tool in research and simulation of plant process control. The software is selected as I and C part to be coupled with RELAP5 code to realize system simulation of NPPs. There are two key techniques to be solved. One is the dynamic data exchange, by which Matlab/Simulink receives plant parameters and returns control results. Database is used to communicate the two codes. Accordingly, Dynamic Link Library (DLL) is applied to link database in RELAP5, while DLL and S-Function is applied in Matlab/Simulink. The other problem is synchronization between the two codes for ensuring consistency in global simulation time. Because Matlab/Simulink always computes faster than RELAP5, the simulation time is sent by RELAP5 and received by Matlab/Simulink. A time control subroutine is added into the simulation procedure of Matlab/Simulink to control its simulation advancement. Through these ways, Matlab/Simulink is dynamically coupled with RELAP5. Thus, in Matlab/Simulink, we can freely design control and protection logic of NPPs and test it with best-estimated plant model feedback. A test will be shown to illuminate that results of coupling calculation are nearly the same with one of single RELAP5 with control logic. In practice, a real Pressurized Water Reactor (PWR) is

13. Slow Orbit Feedback at the ALS Using Matlab

International Nuclear Information System (INIS)

Portmann, G.

1999-01-01

The third generation Advanced Light Source (ALS) produces extremely bright and finely focused photon beams using undulatory, wigglers, and bend magnets. In order to position the photon beams accurately, a slow global orbit feedback system has been developed. The dominant causes of orbit motion at the ALS are temperature variation and insertion device motion. This type of motion can be removed using slow global orbit feedback with a data rate of a few Hertz. The remaining orbit motion in the ALS is only 1-3 micron rms. Slow orbit feedback does not require high computational throughput. At the ALS, the global orbit feedback algorithm, based on the singular valued decomposition method, is coded in MATLAB and runs on a control room workstation. Using the MATLAB environment to develop, test, and run the storage ring control algorithms has proven to be a fast and efficient way to operate the ALS

14. Optics learning by computing, with examples using Maple, MathCad, Mathematica, and MATLAB

CERN Document Server

Moeller, Karl Dieter

2007-01-01

This new edition is intended for a one semester course in optics for juniors and seniors in science and engineering; it uses scripts from Maple, MathCad, Mathematica, and MATLAB provide a simulated laboratory where students can learn by exploration and discovery instead of passive absorption. The text covers all the standard topics of a traditional optics course, including: geometrical optics and aberration, interference and diffraction, coherence, Maxwell's equations, wave guides and propagating modes, blackbody radiation, atomic emission and lasers, optical properties of materials, Fourier transforms and FT spectroscopy, image formation, and holography. It contains step by step derivations of all basic formulas in geometrical, wave and Fourier optics. The basic text is supplemented by over 170 files in Maple, MathCad, Mathematica, and MATLAB (many of which are in the text, each suggesting programs to solve a particular problem, and each linked to a topic in or application of optics. The computer files are d...

15. Fundamentals of bioinformatics and computational biology methods and exercises in matlab

CERN Document Server

Singh, Gautam B

2015-01-01

This book offers comprehensive coverage of all the core topics of bioinformatics, and includes practical examples completed using the MATLAB bioinformatics toolbox™. It is primarily intended as a textbook for engineering and computer science students attending advanced undergraduate and graduate courses in bioinformatics and computational biology. The book develops bioinformatics concepts from the ground up, starting with an introductory chapter on molecular biology and genetics. This chapter will enable physical science students to fully understand and appreciate the ultimate goals of applying the principles of information technology to challenges in biological data management, sequence analysis, and systems biology. The first part of the book also includes a survey of existing biological databases, tools that have become essential in today’s biotechnology research. The second part of the book covers methodologies for retrieving biological information, including fundamental algorithms for sequence compar...

16. STOCHSIMGPU: parallel stochastic simulation for the Systems Biology Toolbox 2 for MATLAB

KAUST Repository

Klingbeil, G.

2011-02-25

Motivation: The importance of stochasticity in biological systems is becoming increasingly recognized and the computational cost of biologically realistic stochastic simulations urgently requires development of efficient software. We present a new software tool STOCHSIMGPU that exploits graphics processing units (GPUs) for parallel stochastic simulations of biological/chemical reaction systems and show that significant gains in efficiency can be made. It is integrated into MATLAB and works with the Systems Biology Toolbox 2 (SBTOOLBOX2) for MATLAB. Results: The GPU-based parallel implementation of the Gillespie stochastic simulation algorithm (SSA), the logarithmic direct method (LDM) and the next reaction method (NRM) is approximately 85 times faster than the sequential implementation of the NRM on a central processing unit (CPU). Using our software does not require any changes to the user\\'s models, since it acts as a direct replacement of the stochastic simulation software of the SBTOOLBOX2. © The Author 2011. Published by Oxford University Press. All rights reserved.

17. Computational partial differential equations using Matlab

CERN Document Server

Li, Jichun

2008-01-01

Brief Overview of Partial Differential Equations The parabolic equations The wave equations The elliptic equations Differential equations in broader areasA quick review of numerical methods for PDEsFinite Difference Methods for Parabolic Equations Introduction Theoretical issues: stability, consistence, and convergence 1-D parabolic equations2-D and 3-D parabolic equationsNumerical examples with MATLAB codesFinite Difference Methods for Hyperbolic Equations IntroductionSome basic difference schemes Dissipation and dispersion errors Extensions to conservation lawsThe second-order hyperbolic PDE

18. MatLab Programming for Engineers Having No Formal Programming Knowledge

Science.gov (United States)

Shaykhian, Linda H.; Shaykhian, Gholam Ali

2007-01-01

MatLab is one of the most widely used very high level programming languages for Scientific and engineering computations. It is very user-friendly and needs practically no formal programming knowledge. Presented here are MatLab programming aspects and not just the MatLab commands for scientists and engineers who do not have formal programming training and also have no significant time to spare for learning programming to solve their real world problems. Specifically provided are programs for visualization. Also, stated are the current limitations of the MatLab, which possibly can be taken care of by Mathworks Inc. in a future version to make MatLab more versatile.

19. MATLAB - Introduction

International Nuclear Information System (INIS)

Jung, Heon Seul

2005-08-01

This book introduces MATLAB giving descriptions of analysis and design of this control system like what is control? cases of control system, working environment of MATLAB, signs of MATLAB, commands of MATLAB, and drawing graphs. It also tells of basic use of simulink, mathematical model of physical system like mechanical-electrical analogous system, system analysis in time part, frequency analysis, state space and design such as canonical from and principle of duality and state observer design.

20. Cluster implementation for parallel computation within MATLAB software environment

International Nuclear Information System (INIS)

Santana, Antonio O. de; Dantas, Carlos C.; Charamba, Luiz G. da R.; Souza Neto, Wilson F. de; Melo, Silvio B. Melo; Lima, Emerson A. de O.

2013-01-01

A cluster for parallel computation with MATLAB software the COCGT - Cluster for Optimizing Computing in Gamma ray Transmission methods, is implemented. The implementation correspond to creation of a local net of computers, facilities and configurations of software, as well as the accomplishment of cluster tests for determine and optimizing of performance in the data processing. The COCGT implementation was required by data computation from gamma transmission measurements applied to fluid dynamic and tomography reconstruction in a FCC-Fluid Catalytic Cracking cold pilot unity, and simulation data as well. As an initial test the determination of SVD - Singular Values Decomposition - of random matrix with dimension (n , n), n=1000, using the Girco's law modified, revealed that COCGT was faster in comparison to the literature [1] cluster, which is similar and operates at the same conditions. Solution of a system of linear equations provided a new test for the COCGT performance by processing a square matrix with n=10000, computing time was 27 s and for square matrix with n=12000, computation time was 45 s. For determination of the cluster behavior in relation to 'parfor' (parallel for-loop) and 'spmd' (single program multiple data), two codes were used containing those two commands and the same problem: determination of SVD of a square matrix with n= 1000. The execution of codes by means of COCGT proved: 1) for the code with 'parfor', the performance improved with the labs number from 1 to 8 labs; 2) for the code 'spmd', just 1 lab (core) was enough to process and give results in less than 1 s. In similar situation, with the difference that now the SVD will be determined from square matrix with n1500, for code with 'parfor', and n=7000, for code with 'spmd'. That results take to conclusions: 1) for the code with 'parfor', the behavior was the same already described above; 2) for code with 'spmd', the same besides having produced a larger performance, it supports a

1. OXlearn: a new MATLAB-based simulation tool for connectionist models.

Science.gov (United States)

Ruh, Nicolas; Westermann, Gert

2009-11-01

OXlearn is a free, platform-independent MATLAB toolbox in which standard connectionist neural network models can be set up, run, and analyzed by means of a user-friendly graphical interface. Due to its seamless integration with the MATLAB programming environment, the inner workings of the simulation tool can be easily inspected and/or extended using native MATLAB commands or components. This combination of usability, transparency, and extendability makes OXlearn an efficient tool for the implementation of basic research projects or the prototyping of more complex research endeavors, as well as for teaching. Both the MATLAB toolbox and a compiled version that does not require access to MATLAB can be downloaded from http://psych.brookes.ac.uk/oxlearn/.

2. MATLAB syntaksen

DEFF Research Database (Denmark)

Skajaa, Anders; Jørgensen, Jakob Heide

MATLAB er et matematik-program som fokuserer på anvendelsen af matricer og vektorer. Deraf navnet MATrix LABoratory. Denne bog er en praktisk vejledning i at forstår og anvende MATLAB syntaksen og fungerer som en hurtig genvej til dig, der skal i gang med at anvende MATLAB i forbindelse med fx dit...

3. Introduction to finite element analysis using MATLAB and Abaqus

CERN Document Server

Khennane, Amar

2013-01-01

There are some books that target the theory of the finite element, while others focus on the programming side of things. Introduction to Finite Element Analysis Using MATLAB(R) and Abaqus accomplishes both. This book teaches the first principles of the finite element method. It presents the theory of the finite element method while maintaining a balance between its mathematical formulation, programming implementation, and application using commercial software. The computer implementation is carried out using MATLAB, while the practical applications are carried out in both MATLAB and Abaqus. MA

4. Matlab enhanced multi-threaded tomography optimization sequence (MEMTOS)

International Nuclear Information System (INIS)

Lum, Edward S.; Pope, Chad L.

2016-01-01

Highlights: • Monte Carlo simulation of spent nuclear fuel assembly neutron computed tomography. • Optimized parallel calculations conducted from within the MATLAB environment. • Projection difference technique used to identify anomalies in spent nuclear fuel assemblies. - Abstract: One challenge associated with spent nuclear fuel assemblies is the lack of non-destructive analysis techniques to determine if fuel pins have been removed or replaced or if there are significant defects associated with fuel pins deep within a fuel assembly. Neutron computed tomography is a promising technique for addressing these qualitative issues. Monte Carlo simulation of spent nuclear fuel neutron computed tomography allows inexpensive process investigation and optimization. The main purpose of this work is to provide a fully automated advanced simulation framework for the analysis of spent nuclear fuel inspection using neutron computed tomography. The simulation framework, called Matlab Enhanced Multi-Threaded Tomography Optimization Sequence (MEMTOS) not only automates the simulation process, but also generates superior tomography image results. MEMTOS is written in the MATLAB scripting language and addresses file management, parallel Monte Carlo execution, results extraction, and tomography image generation. This paper describes the mathematical basis for neutron computed tomography, the Monte Carlo technique used to simulate neutron computed tomography, and the overall tomography simulation optimization algorithm. Sequence results presented include overall simulation speed enhancement, tomography and image results obtained for Experimental Breeder Reactor II spent fuel assemblies and light water reactor fuel assemblies. Optimization using a projection difference technique are also described.

5. Training course "Porting code from Matlab to Python"

OpenAIRE

Diaz, Sandra; Klijn, Wouter; Deepu, Rajalekshmi; Peyser, Alexander; Oden, Lena

2017-01-01

Python is becoming a popular language for scientific applications and is increasingly used for high performance computing. In this course we want to introduce Matlab programmers to the usage of Python. Matlab and Python have a comparable language philosophy, but Python can offer better performance using its optimizations and parallelization interfaces. Python also increases the portability and flexibility (interaction with other open source and proprietary software packages) of solutions, and...

6. A MATLAB-Aided Method for Teaching Calculus-Based Business Mathematics

Science.gov (United States)

Liang, Jiajuan; Pan, William S. Y.

2009-01-01

MATLAB is a powerful package for numerical computation. MATLAB contains a rich pool of mathematical functions and provides flexible plotting functions for illustrating mathematical solutions. The course of calculus-based business mathematics consists of two major topics: 1) derivative and its applications in business; and 2) integration and its…

7. Signals and systems with MATLAB

CERN Document Server

Yang, Won Young; Song, Ik H; Cho, Yong S

2009-01-01

Covers some of the theoretical foundations and mathematical derivations that can be used in higher-level related subjects such as signal processing, communication, and control, minimizing the mathematical difficulty and computational burden. This book illustrates the usage of MATLAB and Simulink for signal and system analysis and design.

8. Practical image and video processing using MATLAB

CERN Document Server

Marques, Oge

2011-01-01

"The book provides a practical introduction to the most important topics in image and video processing using MATLAB (and its Image Processing Toolbox) as a tool to demonstrate the most important techniques and algorithms. The contents are presented in a clear, technically accurate, objective way, with just enough mathematical detail. Most of the chapters are supported by figures, examples, illustrative problems, MATLAB scripts, suggestions for further reading, bibliographical references, useful Web sites, and exercises and computer projects to extend the understanding of their contents"--

9. Modelling real solar cell using PSCAD/MATLAB

Energy Technology Data Exchange (ETDEWEB)

Ramos, Sergio; Silva, Marco; Fernandes, Filipe; Vale, Zita [Polytechnic of Porto (Portugal). GECAD - Knowledge Engineering and Decision Support Research Center

2012-07-01

This paper presents the development of a solar photovoltaic (PV) model based on PSCAD/EMTDC - Power System Computer Aided Design - including a mathematical model study. An additional algorithm has been implemented in MATLAB software in order to calculate several parameters required by the PSCAD developed model. All the simulation study has been performed in PSCAD/MATLAB software simulation tool. A real data base concerning irradiance, cell temperature and PV power generation was used in order to support the evaluation of the implemented PV model. (orig.)

10. A Graphical User Interface to Generalized Linear Models in MATLAB

Directory of Open Access Journals (Sweden)

Peter Dunn

1999-07-01

Full Text Available Generalized linear models unite a wide variety of statistical models in a common theoretical framework. This paper discusses GLMLAB-software that enables such models to be fitted in the popular mathematical package MATLAB. It provides a graphical user interface to the powerful MATLAB computational engine to produce a program that is easy to use but with many features, including offsets, prior weights and user-defined distributions and link functions. MATLAB's graphical capacities are also utilized in providing a number of simple residual diagnostic plots.

11. A suite of MATLAB-based computational tools for automated analysis of COPAS Biosort data

Science.gov (United States)

Morton, Elizabeth; Lamitina, Todd

2010-01-01

Complex Object Parametric Analyzer and Sorter (COPAS) devices are large-object, fluorescence-capable flow cytometers used for high-throughput analysis of live model organisms, including Drosophila melanogaster, Caenorhabditis elegans, and zebrafish. The COPAS is especially useful in C. elegans high-throughput genome-wide RNA interference (RNAi) screens that utilize fluorescent reporters. However, analysis of data from such screens is relatively labor-intensive and time-consuming. Currently, there are no computational tools available to facilitate high-throughput analysis of COPAS data. We used MATLAB to develop algorithms (COPAquant, COPAmulti, and COPAcompare) to analyze different types of COPAS data. COPAquant reads single-sample files, filters and extracts values and value ratios for each file, and then returns a summary of the data. COPAmulti reads 96-well autosampling files generated with the ReFLX adapter, performs sample filtering, graphs features across both wells and plates, performs some common statistical measures for hit identification, and outputs results in graphical formats. COPAcompare performs a correlation analysis between replicate 96-well plates. For many parameters, thresholds may be defined through a simple graphical user interface (GUI), allowing our algorithms to meet a variety of screening applications. In a screen for regulators of stress-inducible GFP expression, COPAquant dramatically accelerated data analysis and allowed us to rapidly move from raw data to hit identification. Because the COPAS file structure is standardized and our MATLAB code is freely available, our algorithms should be extremely useful for analysis of COPAS data from multiple platforms and organisms. The MATLAB code is freely available at our web site (www.med.upenn.edu/lamitinalab/downloads.shtml). PMID:20569218

12. A simplified implementation of edge detection in MATLAB is faster and more sensitive than fast fourier transform for actin fiber alignment quantification.

Science.gov (United States)

Kemeny, Steven Frank; Clyne, Alisa Morss

2011-04-01

Fiber alignment plays a critical role in the structure and function of cells and tissues. While fiber alignment quantification is important to experimental analysis and several different methods for quantifying fiber alignment exist, many studies focus on qualitative rather than quantitative analysis perhaps due to the complexity of current fiber alignment methods. Speed and sensitivity were compared in edge detection and fast Fourier transform (FFT) for measuring actin fiber alignment in cells exposed to shear stress. While edge detection using matrix multiplication was consistently more sensitive than FFT, image processing time was significantly longer. However, when MATLAB functions were used to implement edge detection, MATLAB's efficient element-by-element calculations and fast filtering techniques reduced computation cost 100 times compared to the matrix multiplication edge detection method. The new computation time was comparable to the FFT method, and MATLAB edge detection produced well-distributed fiber angle distributions that statistically distinguished aligned and unaligned fibers in half as many sample images. When the FFT sensitivity was improved by dividing images into smaller subsections, processing time grew larger than the time required for MATLAB edge detection. Implementation of edge detection in MATLAB is simpler, faster, and more sensitive than FFT for fiber alignment quantification.

13. STOCHSIMGPU: parallel stochastic simulation for the Systems Biology Toolbox 2 for MATLAB.

Science.gov (United States)

Klingbeil, Guido; Erban, Radek; Giles, Mike; Maini, Philip K

2011-04-15

The importance of stochasticity in biological systems is becoming increasingly recognized and the computational cost of biologically realistic stochastic simulations urgently requires development of efficient software. We present a new software tool STOCHSIMGPU that exploits graphics processing units (GPUs) for parallel stochastic simulations of biological/chemical reaction systems and show that significant gains in efficiency can be made. It is integrated into MATLAB and works with the Systems Biology Toolbox 2 (SBTOOLBOX2) for MATLAB. The GPU-based parallel implementation of the Gillespie stochastic simulation algorithm (SSA), the logarithmic direct method (LDM) and the next reaction method (NRM) is approximately 85 times faster than the sequential implementation of the NRM on a central processing unit (CPU). Using our software does not require any changes to the user's models, since it acts as a direct replacement of the stochastic simulation software of the SBTOOLBOX2. The software is open source under the GPL v3 and available at http://www.maths.ox.ac.uk/cmb/STOCHSIMGPU. The web site also contains supplementary information. klingbeil@maths.ox.ac.uk Supplementary data are available at Bioinformatics online.

14. Microcontroller USB interfacing with MATLAB GUI for low cost medical ultrasound scanners

Directory of Open Access Journals (Sweden)

Jean Rossario Raj

2016-06-01

Full Text Available This paper presents an 8051 microcontroller-based control of ultrasound scanner prototype hardware from a host laptop MATLAB GUI. The hardware control of many instruments is carried out by microcontrollers. These microcontrollers are in turn controlled from a GUI residing in a computing machine that is connected over the USB interface. Conventionally such GUIs are developed using ‘C’ language or its variants. But MATLAB GUI is a better tool, when such GUI programs need to do huge image/video processing. However interfacing MATLAB with the microcontroller is a challenging task. Here, MATLAB interfacing through an intermediate MEX ‘C’ language program is presented. This paper outlines the MEX programming methods for achieving the smooth interfacing of microcontrollers with MATLAB GUI.

15. MPBEC, a Matlab Program for Biomolecular Electrostatic Calculations.

Science.gov (United States)

Vergara-Perez, Sandra; Marucho, Marcelo

2016-01-01

One of the most used and efficient approaches to compute electrostatic properties of biological systems is to numerically solve the Poisson-Boltzmann (PB) equation. There are several software packages available that solve the PB equation for molecules in aqueous electrolyte solutions. Most of these software packages are useful for scientists with specialized training and expertise in computational biophysics. However, the user is usually required to manually take several important choices, depending on the complexity of the biological system, to successfully obtain the numerical solution of the PB equation. This may become an obstacle for researchers, experimentalists, even students with no special training in computational methodologies. Aiming to overcome this limitation, in this article we present MPBEC, a free, cross-platform, open-source software that provides non-experts in the field an easy and efficient way to perform biomolecular electrostatic calculations on single processor computers. MPBEC is a Matlab script based on the Adaptative Poisson Boltzmann Solver, one of the most popular approaches used to solve the PB equation. MPBEC does not require any user programming, text editing or extensive statistical skills, and comes with detailed user-guide documentation. As a unique feature, MPBEC includes a useful graphical user interface (GUI) application which helps and guides users to configure and setup the optimal parameters and approximations to successfully perform the required biomolecular electrostatic calculations. The GUI also incorporates visualization tools to facilitate users pre- and post- analysis of structural and electrical properties of biomolecules.

16. MPBEC, a Matlab Program for Biomolecular Electrostatic Calculations

Science.gov (United States)

Vergara-Perez, Sandra; Marucho, Marcelo

2016-01-01

One of the most used and efficient approaches to compute electrostatic properties of biological systems is to numerically solve the Poisson-Boltzmann (PB) equation. There are several software packages available that solve the PB equation for molecules in aqueous electrolyte solutions. Most of these software packages are useful for scientists with specialized training and expertise in computational biophysics. However, the user is usually required to manually take several important choices, depending on the complexity of the biological system, to successfully obtain the numerical solution of the PB equation. This may become an obstacle for researchers, experimentalists, even students with no special training in computational methodologies. Aiming to overcome this limitation, in this article we present MPBEC, a free, cross-platform, open-source software that provides non-experts in the field an easy and efficient way to perform biomolecular electrostatic calculations on single processor computers. MPBEC is a Matlab script based on the Adaptative Poisson-Boltzmann Solver, one of the most popular approaches used to solve the PB equation. MPBEC does not require any user programming, text editing or extensive statistical skills, and comes with detailed user-guide documentation. As a unique feature, MPBEC includes a useful graphical user interface (GUI) application which helps and guides users to configure and setup the optimal parameters and approximations to successfully perform the required biomolecular electrostatic calculations. The GUI also incorporates visualization tools to facilitate users pre- and post-analysis of structural and electrical properties of biomolecules.

17. Effective approach to spectroscopy and spectral analysis techniques using Matlab

Science.gov (United States)

Li, Xiang; Lv, Yong

2017-08-01

With the development of electronic information, computer and network, modern education technology has entered new era, which would give a great impact on teaching process. Spectroscopy and spectral analysis is an elective course for Optoelectronic Information Science and engineering. The teaching objective of this course is to master the basic concepts and principles of spectroscopy, spectral analysis and testing of basic technical means. Then, let the students learn the principle and technology of the spectrum to study the structure and state of the material and the developing process of the technology. MATLAB (matrix laboratory) is a multi-paradigm numerical computing environment and fourth-generation programming language. A proprietary programming language developed by MathWorks, MATLAB allows matrix manipulations, plotting of functions and data, Based on the teaching practice, this paper summarizes the new situation of applying Matlab to the teaching of spectroscopy. This would be suitable for most of the current school multimedia assisted teaching

18. DSISoft—a MATLAB VSP data processing package

Science.gov (United States)

Beaty, K. S.; Perron, G.; Kay, I.; Adam, E.

2002-05-01

DSISoft is a public domain vertical seismic profile processing software package developed at the Geological Survey of Canada. DSISoft runs under MATLAB version 5.0 and above and hence is portable between computer operating systems supported by MATLAB (i.e. Unix, Windows, Macintosh, Linux). The package includes processing modules for reading and writing various standard seismic data formats, performing data editing, sorting, filtering, and other basic processing modules. The processing sequence can be scripted allowing batch processing and easy documentation. A structured format has been developed to ensure future additions to the package are compatible with existing modules. Interactive modules have been created using MATLAB's graphical user interface builder for displaying seismic data, picking first break times, examining frequency spectra, doing f- k filtering, and plotting the trace header information. DSISoft modular design facilitates the incorporation of new processing algorithms as they are developed. This paper gives an overview of the scope of the software and serves as a guide for the addition of new modules.

19. Basis and application of MATLAB

International Nuclear Information System (INIS)

Shin, Chun Sik; An, Yeong Ju; Byun, Gi Sik; Lee, Hyeong Gi

1998-01-01

This book introduces MATLAB, which deals with operation and basic function, MATLAB programming like for, if, else, while and script file, equation, calculation and interpolation, operation of the matrix, file management function, such as basic file management function input-output of internal file of MATLAB input-output of outer file of MATLAB, basic graph function, two-dimensional graph and three-dimensional graph and other graph function debugger of MATLAB program in 4.2 version and debugger of MATLAB in 5.1 version.

20. Speeding up the MATLAB complex networks package using graphic processors

International Nuclear Information System (INIS)

Zhang Bai-Da; Wu Jun-Jie; Li Xin; Tang Yu-Hua

2011-01-01

The availability of computers and communication networks allows us to gather and analyse data on a far larger scale than previously. At present, it is believed that statistics is a suitable method to analyse networks with millions, or more, of vertices. The MATLAB language, with its mass of statistical functions, is a good choice to rapidly realize an algorithm prototype of complex networks. The performance of the MATLAB codes can be further improved by using graphic processor units (GPU). This paper presents the strategies and performance of the GPU implementation of a complex networks package, and the Jacket toolbox of MATLAB is used. Compared with some commercially available CPU implementations, GPU can achieve a speedup of, on average, 11.3×. The experimental result proves that the GPU platform combined with the MATLAB language is a good combination for complex network research. (interdisciplinary physics and related areas of science and technology)

1. NNCTRL - a CANCSD toolkit for MATLAB(R)

DEFF Research Database (Denmark)

Nørgård, Peter Magnus; Ravn, Ole; Poulsen, Niels Kjølstad

1996-01-01

A set of tools for computer-aided neuro-control system design (CANCSD) has been developed for the MATLAB environment. The tools can be used for construction and simulation of a variety of neural network based control systems. The design methods featured in the toolkit are: direct inverse control...

2. MOSES: A Matlab-based open-source stochastic epidemic simulator.

Science.gov (United States)

Varol, Huseyin Atakan

2016-08-01

This paper presents an open-source stochastic epidemic simulator. Discrete Time Markov Chain based simulator is implemented in Matlab. The simulator capable of simulating SEQIJR (susceptible, exposed, quarantined, infected, isolated and recovered) model can be reduced to simpler models by setting some of the parameters (transition probabilities) to zero. Similarly, it can be extended to more complicated models by editing the source code. It is designed to be used for testing different control algorithms to contain epidemics. The simulator is also designed to be compatible with a network based epidemic simulator and can be used in the network based scheme for the simulation of a node. Simulations show the capability of reproducing different epidemic model behaviors successfully in a computationally efficient manner.

3. Implementation of Digital Watermarking Using MATLAB Software

OpenAIRE

Karnpriya Vyas; Kirti Sethiya; Sonu Jain

2012-01-01

Digital watermarking holds significant promise as one of the keys to protecting proprietary digital content in the coming years. It focuses on embedding information inside a digital object such that the embedded information is in separable bound to the object. The proposed scheme has been implemented on MATLAB, as it is a high level technical computing language and interactive environment for algorithm development, data visualization, data analysis, and numerical computation. We w...

4. Aplikasi MATLAB untuk Mengenali Karakter Tulisan Tangan

Directory of Open Access Journals (Sweden)

ali mahmudi

2017-03-01

Full Text Available Handwriting recognition is one of the very interesting research object in the field of image processing, artificial intelligence and computer vision. This is due to the handwritten characters is varied in every individual. The style, size and orientation of handwriting characters has made every body’s is different, hence handwriting recognition is a very interesting research object. Handwriting recognition application has been used in quite many applications, such as reading the bank deposits, reading the postal code in letters, and helping peolple in managing documents. This paper presents a handwriting recognition application using Matlab. Matlab toolbox that is used in this research are Image Processing and Neural Network Toolbox.

5. Rapid BeagleBoard prototyping with MATLAB and Simulink

CERN Document Server

Qin, Fei

2013-01-01

This book is a fast-paced guide with practical, hands-on recipes which will show you how to prototype Beagleboard-based audio/video applications using Matlab/Simlink and Sourcery Codebench on a Windows host.Beagleboard Embedded Projects is great for students and academic researchers who have practical ideas and who want to build a proof-of-concept system on an embedded hardware platform quickly and efficiently. It is also useful for product design engineers who want to ratify their applications and reduce the time-to-market. It is assumed that you are familiar with Matlab/Simulink and have som

6. ECONOMIC MODELING PROCESSES USING MATLAB

Directory of Open Access Journals (Sweden)

Anamaria G. MACOVEI

2008-06-01

Full Text Available To study economic phenomena and processes using mathem atical modeling, and to determine the approximatesolution to a problem we need to choose a method of calculation and a numerical computer program, namely thepackage of programs MatLab. Any economic process or phenomenon is a mathematical description of h is behavior,and thus draw up an economic and mathematical model that has the following stages: formulation of the problem, theanalysis process modeling, the production model and design verification, validation and implementation of the model.This article is presented an economic model and its modeling is using mathematical equations and software packageMatLab, which helps us approximation effective solution. As data entry is considered the net cost, the cost of direct andtotal cost and the link between them. I presented the basic formula for determining the total cost. Economic modelcalculations were made in MatLab software package and with graphic representation of its interpretation of the resultsachieved in terms of our specific problem.

7. A pedagogical walkthrough of computational modeling and simulation of Wnt signaling pathway using static causal models in MATLAB.

Science.gov (United States)

Sinha, Shriprakash

2016-12-01

Simulation study in systems biology involving computational experiments dealing with Wnt signaling pathways abound in literature but often lack a pedagogical perspective that might ease the understanding of beginner students and researchers in transition, who intend to work on the modeling of the pathway. This paucity might happen due to restrictive business policies which enforce an unwanted embargo on the sharing of important scientific knowledge. A tutorial introduction to computational modeling of Wnt signaling pathway in a human colorectal cancer dataset using static Bayesian network models is provided. The walkthrough might aid biologists/informaticians in understanding the design of computational experiments that is interleaved with exposition of the Matlab code and causal models from Bayesian network toolbox. The manuscript elucidates the coding contents of the advance article by Sinha (Integr. Biol. 6:1034-1048, 2014) and takes the reader in a step-by-step process of how (a) the collection and the transformation of the available biological information from literature is done, (b) the integration of the heterogeneous data and prior biological knowledge in the network is achieved, (c) the simulation study is designed, (d) the hypothesis regarding a biological phenomena is transformed into computational framework, and (e) results and inferences drawn using d -connectivity/separability are reported. The manuscript finally ends with a programming assignment to help the readers get hands-on experience of a perturbation project. Description of Matlab files is made available under GNU GPL v3 license at the Google code project on https://code.google.com/p/static-bn-for-wnt-signaling-pathway and https: //sites.google.com/site/shriprakashsinha/shriprakashsinha/projects/static-bn-for-wnt-signaling-pathway. Latest updates can be found in the latter website.

8. R and Matlab

CERN Document Server

Hiebeler, David E

2015-01-01

The First Book to Explain How a User of R or MATLAB Can Benefit from the OtherIn today's increasingly interdisciplinary world, R and MATLAB® users from different backgrounds must often work together and share code. R and MATLAB® is designed for users who already know R or MATLAB and now need to learn the other platform. The book makes the transition from one platform to the other as quick and painless as possible.Enables R and MATLAB Users to Easily Collaborate and Share CodeThe author covers essential tasks, such as working with matrices and vectors, writing functions and other programming co

9. Scientific computing

CERN Document Server

Trangenstein, John A

2017-01-01

This is the third of three volumes providing a comprehensive presentation of the fundamentals of scientific computing. This volume discusses topics that depend more on calculus than linear algebra, in order to prepare the reader for solving differential equations. This book and its companions show how to determine the quality of computational results, and how to measure the relative efficiency of competing methods. Readers learn how to determine the maximum attainable accuracy of algorithms, and how to select the best method for computing problems. This book also discusses programming in several languages, including C++, Fortran and MATLAB. There are 90 examples, 200 exercises, 36 algorithms, 40 interactive JavaScript programs, 91 references to software programs and 1 case study. Topics are introduced with goals, literature references and links to public software. There are descriptions of the current algorithms in GSLIB and MATLAB. This book could be used for a second course in numerical methods, for either ...

10. Nuclear Fuel Depletion Analysis Using Matlab Software

Science.gov (United States)

Faghihi, F.; Nematollahi, M. R.

Coupled first order IVPs are frequently used in many parts of engineering and sciences. In this article, we presented a code including three computer programs which are joint with the Matlab software to solve and plot the solutions of the first order coupled stiff or non-stiff IVPs. Some engineering and scientific problems related to IVPs are given and fuel depletion (production of the 239Pu isotope) in a Pressurized Water Nuclear Reactor (PWR) are computed by the present code.

11. Directional quantile regression in Octave (and MATLAB)

Czech Academy of Sciences Publication Activity Database

Boček, Pavel; Šiman, Miroslav

2016-01-01

Roč. 52, č. 1 (2016), s. 28-51 ISSN 0023-5954 R&D Projects: GA ČR GA14-07234S Institutional support: RVO:67985556 Keywords : quantile regression * multivariate quantile * depth contour * Matlab Subject RIV: IN - Informatics, Computer Science Impact factor: 0.379, year: 2016 http://library.utia.cas.cz/separaty/2016/SI/bocek-0458380.pdf

12. COMETS2: An advanced MATLAB toolbox for the numerical analysis of electric fields generated by transcranial direct current stimulation.

Science.gov (United States)

Lee, Chany; Jung, Young-Jin; Lee, Sang Jun; Im, Chang-Hwan

2017-02-01

Since there is no way to measure electric current generated by transcranial direct current stimulation (tDCS) inside the human head through in vivo experiments, numerical analysis based on the finite element method has been widely used to estimate the electric field inside the head. In 2013, we released a MATLAB toolbox named COMETS, which has been used by a number of groups and has helped researchers to gain insight into the electric field distribution during stimulation. The aim of this study was to develop an advanced MATLAB toolbox, named COMETS2, for the numerical analysis of the electric field generated by tDCS. COMETS2 can generate any sizes of rectangular pad electrodes on any positions on the scalp surface. To reduce the large computational burden when repeatedly testing multiple electrode locations and sizes, a new technique to decompose the global stiffness matrix was proposed. As examples of potential applications, we observed the effects of sizes and displacements of electrodes on the results of electric field analysis. The proposed mesh decomposition method significantly enhanced the overall computational efficiency. We implemented an automatic electrode modeler for the first time, and proposed a new technique to enhance the computational efficiency. In this paper, an efficient toolbox for tDCS analysis is introduced (freely available at http://www.cometstool.com). It is expected that COMETS2 will be a useful toolbox for researchers who want to benefit from the numerical analysis of electric fields generated by tDCS. Copyright © 2016. Published by Elsevier B.V.

13. Three-dimensional rendering of segmented object using matlab - biomed 2010.

Science.gov (United States)

Anderson, Jeffrey R; Barrett, Steven F

2010-01-01

The three-dimensional rendering of microscopic objects is a difficult and challenging task that often requires specialized image processing techniques. Previous work has been described of a semi-automatic segmentation process of fluorescently stained neurons collected as a sequence of slice images with a confocal laser scanning microscope. Once properly segmented, each individual object can be rendered and studied as a three-dimensional virtual object. This paper describes the work associated with the design and development of Matlab files to create three-dimensional images from the segmented object data previously mentioned. Part of the motivation for this work is to integrate both the segmentation and rendering processes into one software application, providing a seamless transition from the segmentation tasks to the rendering and visualization tasks. Previously these tasks were accomplished on two different computer systems, windows and Linux. This transition basically limits the usefulness of the segmentation and rendering applications to those who have both computer systems readily available. The focus of this work is to create custom Matlab image processing algorithms for object rendering and visualization, and merge these capabilities to the Matlab files that were developed especially for the image segmentation task. The completed Matlab application will contain both the segmentation and rendering processes in a single graphical user interface, or GUI. This process for rendering three-dimensional images in Matlab requires that a sequence of two-dimensional binary images, representing a cross-sectional slice of the object, be reassembled in a 3D space, and covered with a surface. Additional segmented objects can be rendered in the same 3D space. The surface properties of each object can be varied by the user to aid in the study and analysis of the objects. This inter-active process becomes a powerful visual tool to study and understand microscopic objects.

14. Statistics in Matlab a primer

CERN Document Server

Cho, MoonJung

2014-01-01

List of Tables Preface MATLAB BasicsDesktop Environment Getting Help and Other Documentation Data Import and Export Data I/O via the Command Line The Import Wizard Examples of Data I/O in MATLAB Data I/O with the Statistics Toolbox More Functions for Data I/O Data in MATLAB Data Objects in Base MATLAB Accessing Data Elements Examples of Joining Data Sets Data Types in the Statistics Toolbox Object-Oriented Programming Miscellaneous Topics File and Workspace Management Punctuation in MATLAB Arithmetic Operators Functions in MATLAB Summary and Further Reading Visualizing DataBasic Plot Functions Plotting 2-D Data Plotting 3-D Data Examples Scatter Plots Basic 2-D and 3-D Scatter Plots Scatter Plot Matrix Examples GUIs for Graphics Simple Plot Editing Plotting Tools Interface PLOTS Tab Summary and Further Reading Descriptive StatisticsMeasures of Location Means, Medians, and Modes Examples Measures of Dispersion Range Variance and Standard Deviation Covariance and Correlation Examples Describing the Distribution...

15. A Collection of Nonlinear Aircraft Simulations in MATLAB

Science.gov (United States)

Garza, Frederico R.; Morelli, Eugene A.

2003-01-01

Nonlinear six degree-of-freedom simulations for a variety of aircraft were created using MATLAB. Data for aircraft geometry, aerodynamic characteristics, mass / inertia properties, and engine characteristics were obtained from open literature publications documenting wind tunnel experiments and flight tests. Each nonlinear simulation was implemented within a common framework in MATLAB, and includes an interface with another commercially-available program to read pilot inputs and produce a three-dimensional (3-D) display of the simulated airplane motion. Aircraft simulations include the General Dynamics F-16 Fighting Falcon, Convair F-106B Delta Dart, Grumman F-14 Tomcat, McDonnell Douglas F-4 Phantom, NASA Langley Free-Flying Aircraft for Sub-scale Experimental Research (FASER), NASA HL-20 Lifting Body, NASA / DARPA X-31 Enhanced Fighter Maneuverability Demonstrator, and the Vought A-7 Corsair II. All nonlinear simulations and 3-D displays run in real time in response to pilot inputs, using contemporary desktop personal computer hardware. The simulations can also be run in batch mode. Each nonlinear simulation includes the full nonlinear dynamics of the bare airframe, with a scaled direct connection from pilot inputs to control surface deflections to provide adequate pilot control. Since all the nonlinear simulations are implemented entirely in MATLAB, user-defined control laws can be added in a straightforward fashion, and the simulations are portable across various computing platforms. Routines for trim, linearization, and numerical integration are included. The general nonlinear simulation framework and the specifics for each particular aircraft are documented.

16. A linear algebra course with PC-MATLAB : some experiences

NARCIS (Netherlands)

Smits, J.G.M.M.; Rijpkema, J.J.M.

1992-01-01

The authors present their views on the impact that the use of computers and software packages should have on the contents of a first service course on linear algebra. Furthermore they report on their experiences using the software package PC-MATLAB in such a course.

17. Numerical methods using Matlab

CERN Document Server

Lindfield, George

2012-01-01

Numerical Methods using MATLAB, 3e, is an extensive reference offering hundreds of useful and important numerical algorithms that can be implemented into MATLAB for a graphical interpretation to help researchers analyze a particular outcome. Many worked examples are given together with exercises and solutions to illustrate how numerical methods can be used to study problems that have applications in the biosciences, chaos, optimization, engineering and science across the board. Numerical Methods using MATLAB, 3e, is an extensive reference offering hundreds of use

18. MATLAB as an incentive for student learning of skills

Science.gov (United States)

Bank, C. G.; Ghent, R. R.

2016-12-01

Our course "Computational Geology" takes a holistic approach to student learning by using MATLAB as a focal point to increase students' computing, quantitative reasoning, data analysis, report writing, and teamwork skills. The course, taught since 2007 with recent enrollments around 35 and aimed at 2nd to 3rd-year students, is required for the Geology and Earth and Environmental Systems major programs, and can be chosen as elective in our other programs, including Geophysics. The course is divided into five projects: Pacific plate velocity from the Hawaiian hotspot track, predicting CO2 concentration in the atmosphere, volume of Earth's oceans and sea-level rise, comparing wind directions for Vancouver and Squamish, and groundwater flow. Each project is based on real data, focusses on a mathematical concept (linear interpolation, gradients, descriptive statistics, differential equations) and highlights a programming task (arrays, functions, text file input/output, curve fitting). Working in teams of three, students need to develop a conceptional model to explain the data, and write MATLAB code to visualize the data and match it to their conceptional model. The programming is guided, and students work individually on different aspects (for example: reading the data, fitting a function, unit conversion) which they need to put together to solve the problem. They then synthesize their thought process in a paper. Anecdotal evidence shows that students continue using MATLAB in other courses.

19. Vectorized Matlab Codes for Linear Two-Dimensional Elasticity

Directory of Open Access Journals (Sweden)

Jonas Koko

2007-01-01

Full Text Available A vectorized Matlab implementation for the linear finite element is provided for the two-dimensional linear elasticity with mixed boundary conditions. Vectorization means that there is no loop over triangles. Numerical experiments show that our implementation is more efficient than the standard implementation with a loop over all triangles.

20. Measuring modules for the research of compensators of reactive power with voltage stabilization in MATLAB

Science.gov (United States)

Vlasayevsky, Stanislav; Klimash, Stepan; Klimash, Vladimir

2017-10-01

A set of mathematical modules was developed for evaluation the energy performance in the research of electrical systems and complexes in the MatLab. In the electrotechnical library SimPowerSystems of the MatLab software, there are no measuring modules of energy coefficients characterizing the quality of electricity and the energy efficiency of electrical apparatus. Modules are designed to calculate energy coefficients characterizing the quality of electricity (current distortion and voltage distortion) and energy efficiency indicators (power factor and efficiency) are presented. There are described the methods and principles of building the modules. The detailed schemes of modules built on the elements of the Simulink Library are presented, in this connection, these modules are compatible with mathematical models of electrical systems and complexes in the MatLab. Also there are presented the results of the testing of the developed modules and the results of their verification on the schemes that have analytical expressions of energy indicators.

1. Comparison 3 - 386 MATLAB

DEFF Research Database (Denmark)

Jensen, Niels

1992-01-01

MATLAB is a C-based general tool for mathematical and engineering calculations with limited capabilities for simulation of non-linear equation systems.......MATLAB is a C-based general tool for mathematical and engineering calculations with limited capabilities for simulation of non-linear equation systems....

2. MATLAB-aided teaching and learning in optics and photonics using the methods of computational photonics

Science.gov (United States)

Lin, Zhili; Li, Xiaoyan; Zhu, Daqing; Pu, Jixiong

2017-08-01

Due to the nature of light fields of laser waves and pulses as vector quantities with complex spatial distribution and temporal dependence, the optics and photonics courses have always been difficult to teach and learn without the support of graphical visualization, numerical simulations and hands-on experiments. One of the state-of-the-art method of computational photonics, the finite-difference time-domain(FDTD) method, is applied with MATLAB simulations to model typical teaching cases in optics and photonics courses. The obtained results with graphical visualization in the form of animated pictures allow students to more deeply understand the dynamic process of light interaction with classical optical structures. The discussed teaching methodology is aimed to enhance the teaching effectiveness of optics and photonics courses and arousing the students' learning interest.

3. Numerical methods in finance and economics a MATLAB-based introduction

CERN Document Server

Brandimarte, Paolo

2006-01-01

A state-of-the-art introduction to the powerful mathematical and statistical tools used in the field of financeThe use of mathematical models and numerical techniques is a practice employed by a growing number of applied mathematicians working on applications in finance. Reflecting this development, Numerical Methods in Finance and Economics: A MATLAB?-Based Introduction, Second Edition bridges the gap between financial theory and computational practice while showing readers how to utilize MATLAB?--the powerful numerical computing environment--for financial applications.The author provides an essential foundation in finance and numerical analysis in addition to background material for students from both engineering and economics perspectives. A wide range of topics is covered, including standard numerical analysis methods, Monte Carlo methods to simulate systems affected by significant uncertainty, and optimization methods to find an optimal set of decisions.Among this book''s most outstanding features is the...

4. Essential Matlab and Octave

CERN Document Server

Rogel-Salazar, Jesus

2014-01-01

""This is an excellent book for anyone approaching MATLAB or Octave for the first time. The pleasant language used throughout creates the sensation of having the author by your side. … An interesting feature are the examples used to explain the use of functions and operations. … compared to similar texts on Octave and MATLAB, the author introduces at an early stage how to produce line and surface plots with MATLAB and Octave. It is very attractive to students to be able to quickly produce plots with scientific journal quality. … The margin notes are great as they can also work as virtual bookm

5. MATLAB 3A

DEFF Research Database (Denmark)

Freil, Ole; Kristiansen, Heidi; Kaas, Thomas

MATLAB 3a – Matematiklaboratoriet er en elevbog til første halvdel af 3. klasse. Bogen indeholder fire kapitler: 'Store tal og regnemåder', 'Kan du tegne det?', 'Gange og division', 'Undersøg data og chance'.......MATLAB 3a – Matematiklaboratoriet er en elevbog til første halvdel af 3. klasse. Bogen indeholder fire kapitler: 'Store tal og regnemåder', 'Kan du tegne det?', 'Gange og division', 'Undersøg data og chance'....

6. Digital speech processing using Matlab

CERN Document Server

Gopi, E S

2014-01-01

Digital Speech Processing Using Matlab deals with digital speech pattern recognition, speech production model, speech feature extraction, and speech compression. The book is written in a manner that is suitable for beginners pursuing basic research in digital speech processing. Matlab illustrations are provided for most topics to enable better understanding of concepts. This book also deals with the basic pattern recognition techniques (illustrated with speech signals using Matlab) such as PCA, LDA, ICA, SVM, HMM, GMM, BPN, and KSOM.

7. MOBBED: a computational data infrastructure for handling large collections of event-rich time series datasets in MATLAB.

Science.gov (United States)

Cockfield, Jeremy; Su, Kyungmin; Robbins, Kay A

2013-01-01

Experiments to monitor human brain activity during active behavior record a variety of modalities (e.g., EEG, eye tracking, motion capture, respiration monitoring) and capture a complex environmental context leading to large, event-rich time series datasets. The considerable variability of responses within and among subjects in more realistic behavioral scenarios requires experiments to assess many more subjects over longer periods of time. This explosion of data requires better computational infrastructure to more systematically explore and process these collections. MOBBED is a lightweight, easy-to-use, extensible toolkit that allows users to incorporate a computational database into their normal MATLAB workflow. Although capable of storing quite general types of annotated data, MOBBED is particularly oriented to multichannel time series such as EEG that have event streams overlaid with sensor data. MOBBED directly supports access to individual events, data frames, and time-stamped feature vectors, allowing users to ask questions such as what types of events or features co-occur under various experimental conditions. A database provides several advantages not available to users who process one dataset at a time from the local file system. In addition to archiving primary data in a central place to save space and avoid inconsistencies, such a database allows users to manage, search, and retrieve events across multiple datasets without reading the entire dataset. The database also provides infrastructure for handling more complex event patterns that include environmental and contextual conditions. The database can also be used as a cache for expensive intermediate results that are reused in such activities as cross-validation of machine learning algorithms. MOBBED is implemented over PostgreSQL, a widely used open source database, and is freely available under the GNU general public license at http://visual.cs.utsa.edu/mobbed. Source and issue reports for MOBBED

8. A MATLAB toolbox for the analysis of articulatory data in the production of speech.

Science.gov (United States)

Nguyen, N

2000-08-01

The goal of this paper is to present EMATOOLS, a set of scripts for displaying and annotating acoustic and articulatory data simultaneously in studies on speech production. These scripts were developed with the use of MATLAB, a multiplatform computing environment for numeric computation and visualization. The system is equipped with a mouse-driven graphical interface made up of a number of displays. This interface can be easily customized to speed up routine tasks. The scripts can also be used in a noninteractive way, as stand-alone MATLAB commands. Output data can be imported into any standard spreadsheet. EMATOOLS is freely available from www.lpl.univ-aix.fr/nguyen/ematools.html.

9. Channel Access Client Toolbox for Matlab

International Nuclear Information System (INIS)

2002-01-01

This paper reports on MATLAB Channel Access (MCA) Toolbox--MATLAB [1] interface to EPICS Channel Access (CA) client library. We are developing the toolbox for SPEAR3 accelerator controls, but it is of general use for accelerator and experimental physics applications programming. It is packaged as a MATLAB toolbox to allow easy development of complex CA client applications entirely in MATLAB. The benefits include: the ability to calculate and display parameters that use EPICS process variables as inputs, availability of MATLAB graphics tools for user interface design, and integration with the MATLABbased accelerator modeling software - Accelerator Toolbox [2-4]. Another purpose of this paper is to propose a feasible path to a synergy between accelerator control systems and accelerator simulation codes, the idea known as on-line accelerator model

10. Image processing and pattern recognition with CVIPtools MATLAB toolbox: automatic creation of masks for veterinary thermographic images

Science.gov (United States)

Mishra, Deependra K.; Umbaugh, Scott E.; Lama, Norsang; Dahal, Rohini; Marino, Dominic J.; Sackman, Joseph

2016-09-01

CVIPtools is a software package for the exploration of computer vision and image processing developed in the Computer Vision and Image Processing Laboratory at Southern Illinois University Edwardsville. CVIPtools is available in three variants - a) CVIPtools Graphical User Interface, b) CVIPtools C library and c) CVIPtools MATLAB toolbox, which makes it accessible to a variety of different users. It offers students, faculty, researchers and any user a free and easy way to explore computer vision and image processing techniques. Many functions have been implemented and are updated on a regular basis, the library has reached a level of sophistication that makes it suitable for both educational and research purposes. In this paper, the detail list of the functions available in the CVIPtools MATLAB toolbox are presented and how these functions can be used in image analysis and computer vision applications. The CVIPtools MATLAB toolbox allows the user to gain practical experience to better understand underlying theoretical problems in image processing and pattern recognition. As an example application, the algorithm for the automatic creation of masks for veterinary thermographic images is presented.

11. Generating optimal control simulations of musculoskeletal movement using OpenSim and MATLAB.

Science.gov (United States)

Lee, Leng-Feng; Umberger, Brian R

2016-01-01

Computer modeling, simulation and optimization are powerful tools that have seen increased use in biomechanics research. Dynamic optimizations can be categorized as either data-tracking or predictive problems. The data-tracking approach has been used extensively to address human movement problems of clinical relevance. The predictive approach also holds great promise, but has seen limited use in clinical applications. Enhanced software tools would facilitate the application of predictive musculoskeletal simulations to clinically-relevant research. The open-source software OpenSim provides tools for generating tracking simulations but not predictive simulations. However, OpenSim includes an extensive application programming interface that permits extending its capabilities with scripting languages such as MATLAB. In the work presented here, we combine the computational tools provided by MATLAB with the musculoskeletal modeling capabilities of OpenSim to create a framework for generating predictive simulations of musculoskeletal movement based on direct collocation optimal control techniques. In many cases, the direct collocation approach can be used to solve optimal control problems considerably faster than traditional shooting methods. Cyclical and discrete movement problems were solved using a simple 1 degree of freedom musculoskeletal model and a model of the human lower limb, respectively. The problems could be solved in reasonable amounts of time (several seconds to 1-2 hours) using the open-source IPOPT solver. The problems could also be solved using the fmincon solver that is included with MATLAB, but the computation times were excessively long for all but the smallest of problems. The performance advantage for IPOPT was derived primarily by exploiting sparsity in the constraints Jacobian. The framework presented here provides a powerful and flexible approach for generating optimal control simulations of musculoskeletal movement using OpenSim and MATLAB. This

12. Analysis of Parametric Effects on Efficiency of the Brown Stock Washer in Paper Industry Using MATLAB

Science.gov (United States)

Kumar, Deepak; Kumar, Vivek; Singh, V. P.

2009-07-01

In the present paper, the effects of cake thickness and time on the efficiency of brown stock washer of the paper mill are studied by using mathematical model of pulp washing for the species of sodium and lignin ions. The mechanism of the diffusion- dispersion washing of the bed of the pulp fibers is mathematically modeled by the basic material balance and adsorption isotherm is used to describe the equilibrium between the concentration of the solute in the liquor and concentration of the solute on the fibers. To study the parametric effect, numerical solutions of the axial domain of the system governed by partial differential equations (transport and isotherm equations) for different boundary conditions are obtained by the "pdepe" solver in MATLAB source code. The effects of both the parameters are shown by three dimensional graphical representation as well as concentration profiles.

13. An efficient Matlab script to calculate heterogeneous anisotropically elastic wave propagation in three dimensions

Science.gov (United States)

Boyd, O.S.

2006-01-01

We have created a second-order finite-difference solution to the anisotropic elastic wave equation in three dimensions and implemented the solution as an efficient Matlab script. This program allows the user to generate synthetic seismograms for three-dimensional anisotropic earth structure. The code was written for teleseismic wave propagation in the 1-0.1 Hz frequency range but is of general utility and can be used at all scales of space and time. This program was created to help distinguish among various types of lithospheric structure given the uneven distribution of sources and receivers commonly utilized in passive source seismology. Several successful implementations have resulted in a better appreciation for subduction zone structure, the fate of a transform fault with depth, lithospheric delamination, and the effects of wavefield focusing and defocusing on attenuation. Companion scripts are provided which help the user prepare input to the finite-difference solution. Boundary conditions including specification of the initial wavefield, absorption and two types of reflection are available. ?? 2005 Elsevier Ltd. All rights reserved.

14. A graphical user interface (gui) matlab program Synthetic_Ves For ...

African Journals Online (AJOL)

An interactive and robust computer program for 1D forward modeling of Schlumberger Vertical Electrical Sounding (VES) curves for multilayered earth models is presented. The Graphical User Interface (GUI) enabled software, written in MATLAB v.7.12.0.635 (R2011a), accepts user-defined geologic model parameters (i.e. ...

15. Image processing tensor transform and discrete tomography with Matlab

CERN Document Server

Grigoryan, Artyom M

2012-01-01

Focusing on mathematical methods in computer tomography, Image Processing: Tensor Transform and Discrete Tomography with MATLAB(R) introduces novel approaches to help in solving the problem of image reconstruction on the Cartesian lattice. Specifically, it discusses methods of image processing along parallel rays to more quickly and accurately reconstruct images from a finite number of projections, thereby avoiding overradiation of the body during a computed tomography (CT) scan. The book presents several new ideas, concepts, and methods, many of which have not been published elsewhere. New co

16. Introduction à MATLAB

OpenAIRE

Zenou, Emmanuel

2013-01-01

Cette initiation à MatLab a pour objectif de se familiariser à un outil très utilisé par la communauté scientifique dans les laboratoires et dans l'industrie. Il a également pour objectif d'initier (pour ceux qui n'y ont jamais touché) à la programmation et à l'algorithmique, ce qui est indispensable à tout bon ingénieur aujourd'hui. En effet, beaucoup de notions introduites ici ne sont pas propres à MatLab mais à tout langage structuré comme le C/C++, le Java, etc.

17. Open Source Power Plant Simulator Development Under Matlab Environment

International Nuclear Information System (INIS)

Ratemi, W.M.; Fadilah, S.M.; Abonoor, N

2008-01-01

In this paper an open source programming approach is targeted for the development of power plant simulator under Matlab environment. With this approach many individuals can contribute to the development of the simulator by developing different orders of complexities of the power plant components. Such modules can be modeled based on physical principles, or using neural networks or other methods. All of these modules are categorized in Matlab library, of which the user can select and build up his simulator. Many international companies developed its own authoring tool for the development of its simulators, and hence it became its own property available for high costs. Matlab is a general software developed by mathworks that can be used with its toolkits as the authoring tool for the development of components by different individuals, and through the appropriate coordination, different plant simulators, nuclear, traditional , or even research reactors can be computerly assembled. In this paper, power plant components such as a pressurizer, a reactor, a steam generator, a turbine, a condenser, a feedwater heater, a valve, a pump are modeled based on physical principles. Also a prototype modeling of a reactor ( a scram case) based on neural networks is developed. These modules are inserted in two different Matlab libraries one called physical and the other is called neural. Furthermore, during the simulation one can pause and shuffle the modules selected from the two libraries and then proceed the simulation. Also, under the Matlab environment a PID controller is developed for multi-loop plant which can be integrated for the control of the appropriate developed simulator. This paper is an attempt to base the open source approach for the development of power plant simulators or even research reactor simulators. It then requires the coordination among interested individuals or institutions to set it to professionalism. (author)

18. KALMTOOL for use with MATLAB

DEFF Research Database (Denmark)

Nørgaard, Peter Magnus; Ravn, Ole; Poulsen, Niels Kjølstad

2003-01-01

The KALMTOOL toolbox is a set of MATLAB tools for state estimation for nonlinear systems. The toolbox contains functions for extended Kalman filtering as well as for two new filters called the DD1 filter and the DD2 filter. The toolbox specifically addresses the problem of not having observations...... available at all sampling instants. All functions are available as m-functions but for faster (much faster!) execution, the DD1 and DD2 filters are also available as C Mex files for MATLAB under Windows and Linux. The toolbox requires MATLAB 6. No additional toolboxes are required....

19. Advanced Dynamics Analytical and Numerical Calculations with MATLAB

CERN Document Server

Marghitu, Dan B

2012-01-01

Advanced Dynamics: Analytical and Numerical Calculations with MATLAB provides a thorough, rigorous presentation of kinematics and dynamics while using MATLAB as an integrated tool to solve problems. Topics presented are explained thoroughly and directly, allowing fundamental principles to emerge through applications from areas such as multibody systems, robotics, spacecraft and design of complex mechanical devices. This book differs from others in that it uses symbolic MATLAB for both theory and applications. Special attention is given to solutions that are solved analytically and numerically using MATLAB. The illustrations and figures generated with MATLAB reinforce visual learning while an abundance of examples offer additional support. This book also: Provides solutions analytically and numerically using MATLAB Illustrations and graphs generated with MATLAB reinforce visual learning for students as they study Covers modern technical advancements in areas like multibody systems, robotics, spacecraft and des...

20. Image enhancement using MCNP5 code and MATLAB in neutron radiography

International Nuclear Information System (INIS)

Tharwat, Montaser; Mohamed, Nader; Mongy, T.

2014-01-01

This work presents a method that can be used to enhance the neutron radiography (NR) image for objects with high scattering materials like hydrogen, carbon and other light materials. This method used Monte Carlo code, MCNP5, to simulate the NR process and get the flux distribution for each pixel of the image and determines the scattered neutron distribution that caused image blur, and then uses MATLAB to subtract this scattered neutron distribution from the initial image to improve its quality. This work was performed before the commissioning of digital NR system in Jan. 2013. The MATLAB enhancement method is quite a good technique in the case of static based film neutron radiography, while in neutron imaging (NI) technique, image enhancement and quantitative measurement were efficient by using ImageJ software. The enhanced image quality and quantitative measurements were presented in this work. - Highlights: • This work is applicable for static based film neutron radiography and digital neutron imaging. • MATLAB is a useful tool for imaging enhancement in radiographic film. • Advanced imaging processing is available in the ETRR-2 for imaging processing and data extraction. • The digital imaging system is suitable for complex shapes and sizes, while MATLAB technique is suitable for simple shapes and sizes. • Quantitative measurements are available

1. Parallel Performance of Pure MATLAB "M-files" versus "C-code" as Applied to Formation of Wide-Bandwidth and Wide-Beamwidth SAR Imagery

National Research Council Canada - National Science Library

Nehrbass, John

2003-01-01

.... For scientists in the area of Signal and Image processing, MATLAB is often the tool of choice. MATLAB allows extremely rapid prototyping and debugging of complicated studies with a minimal of computer science expertise...

2. Cyclotron beam dynamic simulations in MATLAB

International Nuclear Information System (INIS)

Karamysheva, G.A.; Karamyshev, O.V.; Lepkina, O.E.

2008-01-01

MATLAB is useful for beam dynamic simulations in cyclotrons. Programming in an easy-to-use environment permits creation of models in a short space of time. Advanced graphical tools of MATLAB give good visualization features to created models. The beam dynamic modeling results with an example of two different cyclotron designs are presented. Programming with MATLAB opens wide possibilities of the development of the complex program, able to perform complete block of calculations for the design of the accelerators

3. Efficient computation of hashes

International Nuclear Information System (INIS)

Lopes, Raul H C; Franqueira, Virginia N L; Hobson, Peter R

2014-01-01

The sequential computation of hashes at the core of many distributed storage systems and found, for example, in grid services can hinder efficiency in service quality and even pose security challenges that can only be addressed by the use of parallel hash tree modes. The main contributions of this paper are, first, the identification of several efficiency and security challenges posed by the use of sequential hash computation based on the Merkle-Damgard engine. In addition, alternatives for the parallel computation of hash trees are discussed, and a prototype for a new parallel implementation of the Keccak function, the SHA-3 winner, is introduced.

4. Matlab Based LOCO

International Nuclear Information System (INIS)

Portmann, Greg; Safranek, James; Huang, Xiaobiao

2011-01-01

The LOCO algorithm has been used by many accelerators around the world. Although the uses for LOCO vary, the most common use has been to find calibration errors and correct the optics functions. The light source community in particular has made extensive use of the LOCO algorithms to tightly control the beta function and coupling. Maintaining high quality beam parameters requires constant attention so a relatively large effort was put into software development for the LOCO application. The LOCO code was originally written in FORTRAN. This code worked fine but it was somewhat awkward to use. For instance, the FORTRAN code itself did not calculate the model response matrix. It required a separate modeling code such as MAD to calculate the model matrix then one manually loads the data into the LOCO code. As the number of people interested in LOCO grew, it required making it easier to use. The decision to port LOCO to Matlab was relatively easy. It's best to use a matrix programming language with good graphics capability; Matlab was also being used for high level machine control; and the accelerator modeling code AT, (5), was already developed for Matlab. Since LOCO requires collecting and processing a relative large amount of data, it is very helpful to have the LOCO code compatible with the high level machine control, (3). A number of new features were added while porting the code from FORTRAN and new methods continue to evolve, (7)(9). Although Matlab LOCO was written with AT as the underlying tracking code, a mechanism to connect to other modeling codes has been provided.

5. Research Reactor Power Control System Design by MATLAB/SIMULINK

International Nuclear Information System (INIS)

Baang, Dane; Suh, Yong Suk; Kim, Young Ki; Im, Ki Hong

2013-01-01

In this study it is presented that MATLAB/SIMULINK can be efficiently used for modeling and power control system design for research reactors. The presented power control system deals with various functions including reactivity control, signals processing, reactivity calculation, alarm request generation, etc., thus it is required to test all the software logic using proper model for reactor, control rods, and field instruments. In MATLAB/SIMULINK tool, point kinetics, thermal model, control absorber rod model, and other instrument models were developed based on reactor parameters and known properties of each component or system. The software for power control system was invented and linked to the model to test each function. From the simulation result it is shown that the power control performance and other functions of the system can be easily tested and analyzed in the proposed simulation structure

6. DynaSim: A MATLAB Toolbox for Neural Modeling and Simulation.

Science.gov (United States)

Sherfey, Jason S; Soplata, Austin E; Ardid, Salva; Roberts, Erik A; Stanley, David A; Pittman-Polletta, Benjamin R; Kopell, Nancy J

2018-01-01

DynaSim is an open-source MATLAB/GNU Octave toolbox for rapid prototyping of neural models and batch simulation management. It is designed to speed up and simplify the process of generating, sharing, and exploring network models of neurons with one or more compartments. Models can be specified by equations directly (similar to XPP or the Brian simulator) or by lists of predefined or custom model components. The higher-level specification supports arbitrarily complex population models and networks of interconnected populations. DynaSim also includes a large set of features that simplify exploring model dynamics over parameter spaces, running simulations in parallel using both multicore processors and high-performance computer clusters, and analyzing and plotting large numbers of simulated data sets in parallel. It also includes a graphical user interface (DynaSim GUI) that supports full functionality without requiring user programming. The software has been implemented in MATLAB to enable advanced neural modeling using MATLAB, given its popularity and a growing interest in modeling neural systems. The design of DynaSim incorporates a novel schema for model specification to facilitate future interoperability with other specifications (e.g., NeuroML, SBML), simulators (e.g., NEURON, Brian, NEST), and web-based applications (e.g., Geppetto) outside MATLAB. DynaSim is freely available at http://dynasimtoolbox.org. This tool promises to reduce barriers for investigating dynamics in large neural models, facilitate collaborative modeling, and complement other tools being developed in the neuroinformatics community.

7. Efficient computation of argumentation semantics

CERN Document Server

Liao, Beishui

2013-01-01

Efficient Computation of Argumentation Semantics addresses argumentation semantics and systems, introducing readers to cutting-edge decomposition methods that drive increasingly efficient logic computation in AI and intelligent systems. Such complex and distributed systems are increasingly used in the automation and transportation systems field, and particularly autonomous systems, as well as more generic intelligent computation research. The Series in Intelligent Systems publishes titles that cover state-of-the-art knowledge and the latest advances in research and development in intelligen

8. Perancangan Kendali Pid Dengan Matlab

OpenAIRE

Sukamta, Sri

2010-01-01

Perancangan PID Controller selama ini menggunakan metoda trial and error dengan perhitungan yangmemakan waktu lama. MatLab yang dilengkapi Control Toolbox, membantu perancang untuk melihatrespon berbagai kombinasi konstanta dengan variasi input yang berbeda. Penggunaan MatLab ini sangatmembantu perancang dalam menentukan kombinasi di antara P, I, dan D Controller untuk menghasilkansistem pengaturan yang baik dan sederhana.

9. A fully customizable MATLAB Framework for MSA based on ISO 5725 Standard

International Nuclear Information System (INIS)

D’Aucelli, Giuseppe Maria; Giaquinto, Nicola; Mannatrizio, Sabino; Savino, Mario

2017-01-01

In this paper, a full featured MATLAB framework for Measurement System Analysis, fully compliant with the ISO 5725 Repeatability and Reproducibility (R and R) assessment is presented. While preserving the operations prescribed in the ISO standard, the software presents distinct improvements. First of all, all computations are made using exact closed-form formulae (instead of statistical tables) allowing a consistent analysis without limitations on the number of participating laboratories and measurements, and using custom significance levels of statistical tests. Second, a double threshold decision system for each test step has been implemented, helping the statistician to decide on the elimination of outliers/stragglers. Third, ANOVA analysis has been included. The software therefore, besides producing quickly and efficiently all the graphical and numerical results required in an inter-laboratory experiment, provide guidelines for properly updating the ISO 5725 standard. (paper)

10. Scientific computing vol II - eigenvalues and optimization

CERN Document Server

Trangenstein, John A

2017-01-01

This is the second of three volumes providing a comprehensive presentation of the fundamentals of scientific computing. This volume discusses more advanced topics than volume one, and is largely not a prerequisite for volume three. This book and its companions show how to determine the quality of computational results, and how to measure the relative efficiency of competing methods. Readers learn how to determine the maximum attainable accuracy of algorithms, and how to select the best method for computing problems. This book also discusses programming in several languages, including C++, Fortran and MATLAB. There are 49 examples, 110 exercises, 66 algorithms, 24 interactive JavaScript programs, 77 references to software programs and 1 case study. Topics are introduced with goals, literature references and links to public software. There are descriptions of the current algorithms in LAPACK, GSLIB and MATLAB. This book could be used for a second course in numerical methods, for either upper level undergraduate...

11. Scientific computing vol III - approximation and integration

CERN Document Server

Trangenstein, John A

2017-01-01

This is the third of three volumes providing a comprehensive presentation of the fundamentals of scientific computing. This volume discusses topics that depend more on calculus than linear algebra, in order to prepare the reader for solving differential equations. This book and its companions show how to determine the quality of computational results, and how to measure the relative efficiency of competing methods. Readers learn how to determine the maximum attainable accuracy of algorithms, and how to select the best method for computing problems. This book also discusses programming in several languages, including C++, Fortran and MATLAB. There are 90 examples, 200 exercises, 36 algorithms, 40 interactive JavaScript programs, 91 references to software programs and 1 case study. Topics are introduced with goals, literature references and links to public software. There are descriptions of the current algorithms in GSLIB and MATLAB. This book could be used for a second course in numerical methods, for either ...

12. Generation of synthetic gamma spectra with MATLAB

International Nuclear Information System (INIS)

Palmerio, Julian J.; Coppo, Anibal D.

2009-01-01

Objectives: The aim of this work is the simulation of gamma spectra using the MATLAB program to generate the calibration curves in efficiency, which will be used to measure radioactive waste in drums. They are necessary for the proper characterization of these drums. A Monte Carlo simulation was basically developed with the random number generator Mersenne Twister and nuclear data obtained from NIST. This paper shows the results obtained and difficulties encountered until today. The physical correction of the simulated spectra has been the only aspect we have been working, up to this moment. Procedures: A simplified representation of the 'Laboratorio de Verificacion y Control de la Calidad' was chosen. Drums with cemented liquid waste are routinely measured in this laboratory. The commercial program MCNP was also used to get a valid reference in the field of simulation of spectra. We analyzed the spectra obtained by MATLAB in the light of classical literature photon detection and the spectrum obtained by MCNP. Conclusions: Currently the program developed seems adequate to simulate a measurement in the 'Laboratorio de Verificacion y Control de la Calidad'. The spectra obtained by MATLAB seem to physically represent what is observed in real spectra. However, it is a slow program. The current development efforts are directed to improve the speed of simulation. An alternative is to use the CUDA language for NVIDIA video cards to parallelized the simulation. An adequate simulation of the electronic measuring chain is also needed to obtain better representations of the shapes of the peaks. (author)

13. Algorithm 873: LSTRS: MATLAB Software for Large-Scale Trust-Region Subproblems and Regularization

DEFF Research Database (Denmark)

Rojas Larrazabal, Marielba de la Caridad; Santos, Sandra A.; Sorensen, Danny C.

2008-01-01

A MATLAB 6.0 implementation of the LSTRS method is resented. LSTRS was described in Rojas, M., Santos, S.A., and Sorensen, D.C., A new matrix-free method for the large-scale trust-region subproblem, SIAM J. Optim., 11(3):611-646, 2000. LSTRS is designed for large-scale quadratic problems with one...... at each step. LSTRS relies on matrix-vector products only and has low and fixed storage requirements, features that make it suitable for large-scale computations. In the MATLAB implementation, the Hessian matrix of the quadratic objective function can be specified either explicitly, or in the form...... of a matrix-vector multiplication routine. Therefore, the implementation preserves the matrix-free nature of the method. A description of the LSTRS method and of the MATLAB software, version 1.2, is presented. Comparisons with other techniques and applications of the method are also included. A guide...

14. Digital image processing an algorithmic approach with Matlab

CERN Document Server

Qidwai, Uvais

2009-01-01

Introduction to Image Processing and the MATLAB EnvironmentIntroduction Digital Image Definitions: Theoretical Account Image Properties MATLAB Algorithmic Account MATLAB CodeImage Acquisition, Types, and File I/OImage Acquisition Image Types and File I/O Basics of Color Images Other Color Spaces Algorithmic Account MATLAB CodeImage ArithmeticIntroduction Operator Basics Theoretical TreatmentAlgorithmic Treatment Coding ExamplesAffine and Logical Operations, Distortions, and Noise in ImagesIntroduction Affine Operations Logical Operators Noise in Images Distortions in ImagesAlgorithmic Account

15. Extraction Analysis and Creation of Three-Dimensional Road Profiles Using Matlab OpenCRG Tool

Directory of Open Access Journals (Sweden)

Rakesh Hari Borse

2015-08-01

Full Text Available In vehicle systems dynamics there are wide applications of simulation of vehicles on road surfaces. These simulation applications are related to vehicle handling ride comfort and durability. For accurate prediction of results there is a need for a reliable and efficient road representations. The efficient representation of road surface profiles is to represent them in three-dimensional space. This is made possible by the CRG Curved Regular Grid approach. OpenCRG is a completely open source project including a tool suite for the creation modification and evaluation of road surfaces. Its objective is to standardized detailed road surface description and it may be used for applications like tire models vibrations or driving simulation. The Matlab tool suite of OpenCRG provides powerful modification or creation tools and allows to visualize the 3D road data representation. The current research focuses on basic concepts of OpenCRG and its Matlab environment. The extraction of longitudinal two-dimensional road profiles from three-dimensional CRG format is researched. The creation of simple virtual three-dimensional roads has been programmed. A Matlab software tool to extract create and analyze the three-dimensional road profiles is to be developed.

16. Une introduction à MATLAB c

OpenAIRE

CREMONA, Christian; LABORATOIRE CENTRAL DES PONTS ET CHAUSSEES - LCPC

2002-01-01

MATLAB c présente toutes les fonctionnalités des approches récentes de la programmation : programmation objet basée sur des hiérarchies de classes, programmation événementielle du graphisme. MATLAB c présente une aide en ligne très complète sous format html des différentes fontions accessibles. COMPTE RENDU DE RECHERCHE

17. Virtual experiment of optical spatial filtering in Matlab environment

Science.gov (United States)

Ji, Yunjing; Wang, Chunyong; Song, Yang; Lai, Jiancheng; Wang, Qinghua; Qi, Jing; Shen, Zhonghua

2017-08-01

The principle of spatial filtering experiment has been introduced, and the computer simulation platform with graphical user interface (GUI) has been made out in Matlab environment. Using it various filtering processes for different input image or different filtering purpose will be completed accurately, and filtering effect can be observed clearly with adjusting experimental parameters. The physical nature of the optical spatial filtering can be showed vividly, and so experimental teaching effect will be promoted.

18. Test Generator for MATLAB Simulations

Science.gov (United States)

Henry, Joel

2011-01-01

MATLAB Automated Test Tool, version 3.0 (MATT 3.0) is a software package that provides automated tools that reduce the time needed for extensive testing of simulation models that have been constructed in the MATLAB programming language by use of the Simulink and Real-Time Workshop programs. MATT 3.0 runs on top of the MATLAB engine application-program interface to communicate with the Simulink engine. MATT 3.0 automatically generates source code from the models, generates custom input data for testing both the models and the source code, and generates graphs and other presentations that facilitate comparison of the outputs of the models and the source code for the same input data. Context-sensitive and fully searchable help is provided in HyperText Markup Language (HTML) format.

19. Power-efficient computer architectures recent advances

CERN Document Server

Själander, Magnus; Kaxiras, Stefanos

2014-01-01

As Moore's Law and Dennard scaling trends have slowed, the challenges of building high-performance computer architectures while maintaining acceptable power efficiency levels have heightened. Over the past ten years, architecture techniques for power efficiency have shifted from primarily focusing on module-level efficiencies, toward more holistic design styles based on parallelism and heterogeneity. This work highlights and synthesizes recent techniques and trends in power-efficient computer architecture.Table of Contents: Introduction / Voltage and Frequency Management / Heterogeneity and Sp

20. Digital Signal Processing for Medical Imaging Using Matlab

CERN Document Server

Gopi, E S

2013-01-01

This book describes medical imaging systems, such as X-ray, Computed tomography, MRI, etc. from the point of view of digital signal processing. Readers will see techniques applied to medical imaging such as Radon transformation, image reconstruction, image rendering, image enhancement and restoration, and more. This book also outlines the physics behind medical imaging required to understand the techniques being described. The presentation is designed to be accessible to beginners who are doing research in DSP for medical imaging. Matlab programs and illustrations are used wherever possible to reinforce the concepts being discussed.  ·         Acts as a “starter kit” for beginners doing research in DSP for medical imaging; ·         Uses Matlab programs and illustrations throughout to make content accessible, particularly with techniques such as Radon transformation and image rendering; ·         Includes discussion of the basic principles behind the various medical imaging tec...

1. One hundred physics visualizations using Matlab

CERN Document Server

Green, Dan

2014-01-01

This book provides visualizations of many topics in general physics. The aim is to have an interactive MATLAB script wherein the user can vary parameters in a specific problem and then immediately see the outcome by way of dynamic movies of the response of the system in question. MATLAB tools are used throughout and the software scripts accompany the text in Symbolic Mathematics, Classical Mechanics, Electromagnetism, Waves and Optics, Gases and Fluid Flow, Quantum Mechanics, Special and General Relativity, and Astrophysics and Cosmology. The emphasis is on building up an intuition by running many different parametric choices chosen actively by the user and watching the subsequent behavior of the system. Physics books using MATLAB do not have the range or the intent of this text. They are rather steeped in technical detail. Symbolic math is used extensively and is integral to the aim of using MATLAB tools to accomplish the technical aspects of problem solving.

2. The finite volume method in computational fluid dynamics an advanced introduction with OpenFOAM and Matlab

CERN Document Server

Moukalled, F; Darwish, M

2016-01-01

This textbook explores both the theoretical foundation of the Finite Volume Method (FVM) and its applications in Computational Fluid Dynamics (CFD). Readers will discover a thorough explanation of the FVM numerics and algorithms used for the simulation of incompressible and compressible fluid flows, along with a detailed examination of the components needed for the development of a collocated unstructured pressure-based CFD solver. Two particular CFD codes are explored. The first is uFVM, a three-dimensional unstructured pressure-based finite volume academic CFD code, implemented within Matlab. The second is OpenFOAM®, an open source framework used in the development of a range of CFD programs for the simulation of industrial scale flow problems. With over 220 figures, numerous examples and more than one hundred exercise on FVM numerics, programming, and applications, this textbook is suitable for use in an introductory course on the FVM, in an advanced course on numerics, and as a reference for CFD programm...

3. Proper generalized decompositions an introduction to computer implementation with Matlab

CERN Document Server

Cueto, Elías; Alfaro, Icíar

2016-01-01

This book is intended to help researchers overcome the entrance barrier to Proper Generalized Decomposition (PGD), by providing a valuable tool to begin the programming task. Detailed Matlab Codes are included for every chapter in the book, in which the theory previously described is translated into practice. Examples include parametric problems, non-linear model order reduction and real-time simulation, among others. Proper Generalized Decomposition (PGD) is a method for numerical simulation in many fields of applied science and engineering. As a generalization of Proper Orthogonal Decomposition or Principal Component Analysis to an arbitrary number of dimensions, PGD is able to provide the analyst with very accurate solutions for problems defined in high dimensional spaces, parametric problems and even real-time simulation. .

4. An Accelerator Control Middle Layer Using MATLAB

International Nuclear Information System (INIS)

Portmann, Gregory J.; Corbett, Jeff; Terebilo, Andrei

2005-01-01

Matlab is an interpretive programming language originally developed for convenient use with the LINPACK and EISPACK libraries. Matlab is appealing for accelerator physics because it is matrix-oriented, provides an active workspace for system variables, powerful graphics capabilities, built-in math libraries, and platform independence. A number of accelerator software toolboxes have been written in Matlab -- the Accelerator Toolbox (AT) for model-based machine simulations, LOCO for on-line model calibration, and Matlab Channel Access (MCA) to connect with EPICS. The function of the MATLAB ''MiddleLayer'' is to provide a scripting language for machine simulations and on-line control, including non-EPICS based control systems. The MiddleLayer has simplified and streamlined development of high-level applications including configuration control, energy ramp, orbit correction, photon beam steering, ID compensation, beam-based alignment, tune correction and response matrix measurement. The database-driven Middle Layer software is largely machine-independent and easy to port. Six accelerators presently use the software package with more scheduled to come on line soon

5. Menhir: An Environment for High Performance Matlab

Directory of Open Access Journals (Sweden)

Stéphane Chauveau

1999-01-01

Full Text Available In this paper we present Menhir a compiler for generating sequential or parallel code from the Matlab language. The compiler has been designed in the context of using Matlab as a specification language. One of the major features of Menhir is its retargetability to generate parallel and sequential C or Fortran code. We present the compilation process and the target system description for Menhir. Preliminary performances are given and compared with MCC, the MathWorks Matlab compiler.

6. A Compilation of MATLAB Scripts and Functions for MACGMC Analyses

Science.gov (United States)

Murthy, Pappu L. N.; Bednarcyk, Brett A.; Mital, Subodh K.

2017-01-01

The primary aim of the current effort is to provide scripts that automate many of the repetitive pre- and post-processing tasks associated with composite materials analyses using the Micromechanics Analysis Code with the Generalized Method of Cells. This document consists of a compilation of hundreds of scripts that were developed in MATLAB (The Mathworks, Inc., Natick, MA) programming language and consolidated into 16 MATLAB functions. (MACGMC). MACGMC is a composite material and laminate analysis software code developed at NASA Glenn Research Center. The software package has been built around the generalized method of cells (GMC) family of micromechanics theories. The computer code is developed with a user-friendly framework, along with a library of local inelastic, damage, and failure models. Further, application of simulated thermo-mechanical loading, generation of output results, and selection of architectures to represent the composite material have been automated to increase the user friendliness, as well as to make it more robust in terms of input preparation and code execution. Finally, classical lamination theory has been implemented within the software, wherein GMC is used to model the composite material response of each ply. Thus, the full range of GMC composite material capabilities is available for analysis of arbitrary laminate configurations as well. The pre-processing tasks include generation of a multitude of different repeating unit cells (RUCs) for CMCs and PMCs, visualization of RUCs from MACGMC input and output files and generation of the RUC section of a MACGMC input file. The post-processing tasks include visualization of the predicted composite response, such as local stress and strain contours, damage initiation and progression, stress-strain behavior, and fatigue response. In addition to the above, several miscellaneous scripts have been developed that can be used to perform repeated Monte-Carlo simulations to enable probabilistic

7. A primer on the energy efficiency of computing

Energy Technology Data Exchange (ETDEWEB)

Koomey, Jonathan G. [Research Fellow, Steyer-Taylor Center for Energy Policy and Finance, Stanford University (United States)

2015-03-30

The efficiency of computing at peak output has increased rapidly since the dawn of the computer age. This paper summarizes some of the key factors affecting the efficiency of computing in all usage modes. While there is still great potential for improving the efficiency of computing devices, we will need to alter how we do computing in the next few decades because we are finally approaching the limits of current technologies.

8. GATE: Improving the computational efficiency

International Nuclear Information System (INIS)

Staelens, S.; De Beenhouwer, J.; Kruecker, D.; Maigne, L.; Rannou, F.; Ferrer, L.; D'Asseler, Y.; Buvat, I.; Lemahieu, I.

2006-01-01

GATE is a software dedicated to Monte Carlo simulations in Single Photon Emission Computed Tomography (SPECT) and Positron Emission Tomography (PET). An important disadvantage of those simulations is the fundamental burden of computation time. This manuscript describes three different techniques in order to improve the efficiency of those simulations. Firstly, the implementation of variance reduction techniques (VRTs), more specifically the incorporation of geometrical importance sampling, is discussed. After this, the newly designed cluster version of the GATE software is described. The experiments have shown that GATE simulations scale very well on a cluster of homogeneous computers. Finally, an elaboration on the deployment of GATE on the Enabling Grids for E-Science in Europe (EGEE) grid will conclude the description of efficiency enhancement efforts. The three aforementioned methods improve the efficiency of GATE to a large extent and make realistic patient-specific overnight Monte Carlo simulations achievable

9. Computer Based Learning in an Undergraduate Physics Laboratory: Interfacing and Instrument Control Using Matlab

Science.gov (United States)

Sharp, J. S.; Glover, P. M.; Moseley, W.

2007-01-01

In this paper we describe the recent changes to the curriculum of the second year practical laboratory course in the School of Physics and Astronomy at the University of Nottingham. In particular, we describe how Matlab has been implemented as a teaching tool and discuss both its pedagogical advantages and disadvantages in teaching undergraduate…

10. [Application of the mixed programming with Labview and Matlab in biomedical signal analysis].

Science.gov (United States)

Yu, Lu; Zhang, Yongde; Sha, Xianzheng

2011-01-01

This paper introduces the method of mixed programming with Labview and Matlab, and applies this method in a pulse wave pre-processing and feature detecting system. The method has been proved suitable, efficient and accurate, which has provided a new kind of approach for biomedical signal analysis.

11. Nonlinear analysis of flexible beams undergoing large rotations Via symbolic computations

Directory of Open Access Journals (Sweden)

Yuan Xiaofeng

2001-01-01

Full Text Available In this paper, a two-stage approach is presented for analyzing flexible beams undergoing large rotations. In the first stage, the symbolic forms of equations of motion and the Jacobian matrix are generated by means of MATLAB and written into a MATLAB script file automatically, where the flexible beams are described by the unified formulation presented in our previous paper. In the second stage, the derived equations of motion are solved by means of implicit numerical methods. Several comparison computations are performed. The two-stage approach proves to be much more efficient than pure numerical one.

12. MATLAB algorithm to implement soil water data assimilation with the Ensemble Kalman Filter using HYDRUS.

Science.gov (United States)

Valdes-Abellan, Javier; Pachepsky, Yakov; Martinez, Gonzalo

2018-01-01

Data assimilation is becoming a promising technique in hydrologic modelling to update not only model states but also to infer model parameters, specifically to infer soil hydraulic properties in Richard-equation-based soil water models. The Ensemble Kalman Filter method is one of the most widely employed method among the different data assimilation alternatives. In this study the complete Matlab© code used to study soil data assimilation efficiency under different soil and climatic conditions is shown. The code shows the method how data assimilation through EnKF was implemented. Richards equation was solved by the used of Hydrus-1D software which was run from Matlab. •MATLAB routines are released to be used/modified without restrictions for other researchers•Data assimilation Ensemble Kalman Filter method code.•Soil water Richard equation flow solved by Hydrus-1D.

13. Linking Advanced Visualization and MATLAB for the Analysis of 3D Gene Expression Data

Energy Technology Data Exchange (ETDEWEB)

Ruebel, Oliver; Keranen, Soile V.E.; Biggin, Mark; Knowles, David W.; Weber, Gunther H.; Hagen, Hans; Hamann, Bernd; Bethel, E. Wes

2011-03-30

Three-dimensional gene expression PointCloud data generated by the Berkeley Drosophila Transcription Network Project (BDTNP) provides quantitative information about the spatial and temporal expression of genes in early Drosophila embryos at cellular resolution. The BDTNP team visualizes and analyzes Point-Cloud data using the software application PointCloudXplore (PCX). To maximize the impact of novel, complex data sets, such as PointClouds, the data needs to be accessible to biologists and comprehensible to developers of analysis functions. We address this challenge by linking PCX and Matlab via a dedicated interface, thereby providing biologists seamless access to advanced data analysis functions and giving bioinformatics researchers the opportunity to integrate their analysis directly into the visualization application. To demonstrate the usefulness of this approach, we computationally model parts of the expression pattern of the gene even skipped using a genetic algorithm implemented in Matlab and integrated into PCX via our Matlab interface.

14. Computer-Aided Teaching Using MATLAB/Simulink for Enhancing an IM Course With Laboratory Tests

Science.gov (United States)

Bentounsi, A.; Djeghloud, H.; Benalla, H.; Birem, T.; Amiar, H.

2011-01-01

This paper describes an automatic procedure using MATLAB software to plot the circle diagram for two induction motors (IMs), with wound and squirrel-cage rotors, from no-load and blocked-rotor tests. The advantage of this approach is that it avoids the need for a direct load test in predetermining the IM characteristics under reduced power.…

15. A guide to MATLAB for beginners and experienced users

CERN Document Server

Hunt, Brian R; Rosenberg, Jonathan M

2014-01-01

Now in its third edition, this outstanding textbook explains everything you need to get started using MATLAB®. It contains concise explanations of essential MATLAB commands, as well as easily understood instructions for using MATLAB's programming features, graphical capabilities, simulation models, and rich desktop interface. MATLAB 8 and its new user interface is treated extensively in the book. New features in this edition include: a complete treatment of MATLAB's publish feature; new material on MATLAB graphics, enabling the user to master quickly the various symbolic and numerical plotting routines; and a robust presentation of MuPAD® and how to use it as a stand-alone platform. The authors have also updated the text throughout, reworking examples and exploring new applications. The book is essential reading for beginners, occasional users and experienced users wishing to brush up their skills. Further resources are available from the authors' website at www-math.umd.edu/schol/a-guide-to-matlab.html.

16. Application of MATLAB in testing digital power supply controllers

International Nuclear Information System (INIS)

Ke Xinhua; Chinese Academy of Sciences, Beijing; Lu Songlin; Shen Tianjian

2008-01-01

Based on introducing MATLAB SISOTOOL in MATLAB control box and the magnet power supply system in detail, this paper presented the application of MATLAB SISOTOOL in Testing Digital Power Supply controllers. This control tool should be popularized because of its characteristics of convenience and easy-to-use. (authors)

17. UTV Expansion Pack - Special-Purpose Rank Revealing Algorithms (version 1.0 for Matlab 6.5)

DEFF Research Database (Denmark)

Fierro, Ricardo D.; Hansen, Per Christian

This collection of Matlab software supplements and complements the package UTV Tools from 1999, and includes implementations of special-purpose rank-revealing algorithms developed since the publication of the original package. We provide algorithms for computing and modifying symmetric rank...

18. MATLAB for Engineering and the Life Sciences

CERN Document Server

Tranquillo, Joseph

2011-01-01

In recent years, the life sciences have embraced simulation as an important tool in biomedical research. Engineers are also using simulation as a powerful step in the design process. In both arenas, Matlab has become the gold standard. It is easy to learn, flexible, and has a large and growing userbase. MATLAB for Engineering and the Life Sciences is a self-guided tour of the basic functionality of MATLAB along with the functions that are most commonly used in biomedical engineering and other life sciences. Although the text is written for undergraduates, graduate students and academics, those

19. Discrete random signal processing and filtering primer with Matlab

CERN Document Server

Poularikas, Alexander D

2013-01-01

Engineers in all fields will appreciate a practical guide that combines several new effective MATLAB® problem-solving approaches and the very latest in discrete random signal processing and filtering.Numerous Useful Examples, Problems, and Solutions - An Extensive and Powerful ReviewWritten for practicing engineers seeking to strengthen their practical grasp of random signal processing, Discrete Random Signal Processing and Filtering Primer with MATLAB provides the opportunity to doubly enhance their skills. The author, a leading expert in the field of electrical and computer engineering, offe

20. An Accelerator control middle layer using Matlab

CERN Document Server

Portmann, G J; Terebilo, Andrei

2005-01-01

Matlab is a matrix manipulation language originally developed to be a convenient language for using the LINPACK and EISPACK libraries. What makes Matlab so appealing for accelerator physics is the combination of a matrix oriented programming language, an active workspace for system variables, powerful graphics capability, built-in math libraries, and platform independence. A number of software toolboxes for accelerators have been written in Matlab  the Accelerator Toolbox (AT) for machine simulations, LOCO for accelerator calibration, Matlab Channel Access Toolbox (MCA) for EPICS connections, and the Middle Layer. This paper will describe the MiddleLayer software toolbox that resides between the high-level control applications and the low-level accelerator control system. This software was a collaborative effort between ALS and Spear but was written to easily port. Five accelerators presently use this software  Spear, ALS, CLS, and the X-ray and VUV rings at Brookhaven. The Middle Layer fu...

1. MOCCASIN: converting MATLAB ODE models to SBML.

Science.gov (United States)

Gómez, Harold F; Hucka, Michael; Keating, Sarah M; Nudelman, German; Iber, Dagmar; Sealfon, Stuart C

2016-06-15

MATLAB is popular in biological research for creating and simulating models that use ordinary differential equations (ODEs). However, sharing or using these models outside of MATLAB is often problematic. A community standard such as Systems Biology Markup Language (SBML) can serve as a neutral exchange format, but translating models from MATLAB to SBML can be challenging-especially for legacy models not written with translation in mind. We developed MOCCASIN (Model ODE Converter for Creating Automated SBML INteroperability) to help. MOCCASIN can convert ODE-based MATLAB models of biochemical reaction networks into the SBML format. MOCCASIN is available under the terms of the LGPL 2.1 license (http://www.gnu.org/licenses/lgpl-2.1.html). Source code, binaries and test cases can be freely obtained from https://github.com/sbmlteam/moccasin : mhucka@caltech.edu More information is available at https://github.com/sbmlteam/moccasin. © The Author 2016. Published by Oxford University Press.

2. ANALYSIS AND SIMULATION OF INDUSTRIAL manipulators K 180 by a software MATLAB

Directory of Open Access Journals (Sweden)

Slobodan Stefanović

2014-07-01

Full Text Available Robotics is a multidisciplinary branch of science that integrates knowledge from many areas of mechanics, electronics, computer science and automation. Due to the large application in practice often goes in some parts of medicine, art, economics. Further in the presentation we will experimentally demonstrate the application of MATLAB 2010 to create industrial robot KR 80 and movement simulations.

3. SIGNUM: A Matlab, TIN-based landscape evolution model

Science.gov (United States)

Refice, A.; Giachetta, E.; Capolongo, D.

2012-08-01

Several numerical landscape evolution models (LEMs) have been developed to date, and many are available as open source codes. Most are written in efficient programming languages such as Fortran or C, but often require additional code efforts to plug in to more user-friendly data analysis and/or visualization tools to ease interpretation and scientific insight. In this paper, we present an effort to port a common core of accepted physical principles governing landscape evolution directly into a high-level language and data analysis environment such as Matlab. SIGNUM (acronym for Simple Integrated Geomorphological Numerical Model) is an independent and self-contained Matlab, TIN-based landscape evolution model, built to simulate topography development at various space and time scales. SIGNUM is presently capable of simulating hillslope processes such as linear and nonlinear diffusion, fluvial incision into bedrock, spatially varying surface uplift which can be used to simulate changes in base level, thrust and faulting, as well as effects of climate changes. Although based on accepted and well-known processes and algorithms in its present version, it is built with a modular structure, which allows to easily modify and upgrade the simulated physical processes to suite virtually any user needs. The code is conceived as an open-source project, and is thus an ideal tool for both research and didactic purposes, thanks to the high-level nature of the Matlab environment and its popularity among the scientific community. In this paper the simulation code is presented together with some simple examples of surface evolution, and guidelines for development of new modules and algorithms are proposed.

4. Development of Graphical User Interface for Finite Element Analysis of Static Loading of a Column using MATLAB

Directory of Open Access Journals (Sweden)

Moses Omolayo PETINRIN

2010-12-01

Full Text Available In this work, the capability of MATLAB software package to develop graphical user interface (GUI package was demonstrated. A GUI was successfully developed using MATLAB programming language to study the behaviour of a suspended column under uniaxial static loading by solving the numerical model created based on the finite element method (FEM. The comparison between the exact solution from previous researches and the numerical analysis showed good agreement. The column average strain, average stress and average load are equivalent but more accurate to the ones obtained when the whole column is taken as one element (two nodes for one dimensional linear finite element problem. It was established in this work that MATLAB is not only a software package for numerical computation but also for application development.

5. Numerical simulation of dimples in airfoil using MATLAB

Science.gov (United States)

Booma Devi, P.; Shah, Dilip A.

2017-05-01

The Aircraft wing is a point of important research which poses greater challenge in terms of aerodynamic efficiency. The flow separation control method is addressed in classical aerodynamics methods. This study focuses on influence of dimples on controlling the flow and also increasing the aerodynamic efficiency. The periodic process of placing the cavities on the wing starting from root to tip controls the flow separation. The linear variation of characteristic curve provides the information about the flow separation and control of flow on upper surface of the airfoil.These different shapes are utilized viz., Square, Rectangle and Triangle. The numerical simulation is carried out in using MATLAB package. Preliminary analysis on the flow separation is carried out focuses on laminar flow separation, which has the influence on the overall lift generation and drag generation.

6. Cosmology with MATLAB

CERN Document Server

Green, Dan

2016-01-01

This volume makes explicit use of the synergy between cosmology and high energy physics, for example, supersymmetry and dark matter, or nucleosynthesis and the baryon-to-photon ratio. In particular the exciting possible connection between the recently discovered Higgs scalar and the scalar field responsible for inflation is explored.The recent great advances in the accuracy of the basic cosmological parameters is exploited in that no free scale parameters such as h appear, rather the basic calculations are done numerically using all sources of energy density simultaneously. Scripts are provided that allow the reader to calculate exact results for the basic parameters. Throughout MATLAB tools such as symbolic math, numerical solutions, plots and 'movies' of the dynamical evolution of systems are used. The GUI package is also shown as an example of the real time manipulation of parameters which is available to the reader.All the MATLAB scripts are made available to the reader to explore examples of the uses of ...

7. MatLab 1b

DEFF Research Database (Denmark)

Kristiansen, Heidi; Kaas, Thomas; Freil, Ole

Bogen indeholder fire kapitler: ’Tal i spil’, ’Spejlinger og mønstre’, ’Mønstre med farver, figurer og tal’ og ’Længde og vægt’. MATLAB: •bygger på en undersøgende og problemorienteret tilgang til matematikken •understøtter læringsmålstyret undervisning •har fokus på faglige samtaler og undersøge......Bogen indeholder fire kapitler: ’Tal i spil’, ’Spejlinger og mønstre’, ’Mønstre med farver, figurer og tal’ og ’Længde og vægt’. MATLAB: •bygger på en undersøgende og problemorienteret tilgang til matematikken •understøtter læringsmålstyret undervisning •har fokus på faglige samtaler og...

8. Orthogonal transformations for change detection, Matlab code

DEFF Research Database (Denmark)

2005-01-01

Matlab code to do multivariate alteration detection (MAD) analysis, maximum autocorrelation factor (MAF) analysis, canonical correlation analysis (CCA) and principal component analysis (PCA) on image data.......Matlab code to do multivariate alteration detection (MAD) analysis, maximum autocorrelation factor (MAF) analysis, canonical correlation analysis (CCA) and principal component analysis (PCA) on image data....

9. Image enhancement using MCNP5 code and MATLAB in neutron radiography.

Science.gov (United States)

Tharwat, Montaser; Mohamed, Nader; Mongy, T

2014-07-01

This work presents a method that can be used to enhance the neutron radiography (NR) image for objects with high scattering materials like hydrogen, carbon and other light materials. This method used Monte Carlo code, MCNP5, to simulate the NR process and get the flux distribution for each pixel of the image and determines the scattered neutron distribution that caused image blur, and then uses MATLAB to subtract this scattered neutron distribution from the initial image to improve its quality. This work was performed before the commissioning of digital NR system in Jan. 2013. The MATLAB enhancement method is quite a good technique in the case of static based film neutron radiography, while in neutron imaging (NI) technique, image enhancement and quantitative measurement were efficient by using ImageJ software. The enhanced image quality and quantitative measurements were presented in this work. Copyright © 2014 Elsevier Ltd. All rights reserved.

10. Mathematical Modeling Using MATLAB

National Research Council Canada - National Science Library

Phillips, Donovan

1998-01-01

.... Mathematical Modeling Using MA MATLAB acts as a companion resource to A First Course in Mathematical Modeling with the goal of guiding the reader to a fuller understanding of the modeling process...

11. Introduction to TAFI - A Matlab® toolbox for analysis of flexural isostasy

Science.gov (United States)

Jha, S.; Harry, D. L.; Schutt, D.

2016-12-01

The isostatic response of vertical tectonic loads emplaced on thin elastic plates overlying inviscid substrate and the corresponding gravity anomalies are commonly modeled using well established theories and methodologies of flexural analysis. However, such analysis requires some mathematical and coding expertise on part of users. With that in mind, we designed a new interactive Matlab® toolbox called Toolbox for Analysis of Flexural Isostasy (TAFI). TAFI allows users to create forward models (2-D and 3-D) of flexural deformation of the lithosphere and resulting gravity anomaly. TAFI computes Green's Functions for flexure of the elastic plate subjected to point or line loads, and analytical solution for harmonic loads. Flexure due to non-impulsive, distributed 2-D or 3-D loads are computed by convolving the appropriate Green's function with a user-supplied spatially discretized load function. The gravity anomaly associated with each density interface is calculated by using the Fourier Transform of flexural deflection of these interfaces and estimating the gravity in the wavenumber domain. All models created in TAFI are based on Matlab's intrinsic functions and do not require any specialized toolbox, function or library except those distributed with TAFI. Modeling functions within TAFI can be called from Matlab workspace, from within user written programs or from the TAFI's graphical user interface (GUI). The GUI enables the user to model the flexural deflection of lithosphere interactively, enabling real time comparison of model fit with observed data constraining the flexural deformation and gravity, facilitating rapid search for best fitting flexural model. TAFI is a very useful teaching and research tool and have been tested rigorously in graduate level teaching and basic research environment.

12. Flexible missile autopilot design studies with PC-MATLAB/386

Science.gov (United States)

Ruth, Michael J.

1989-01-01

Development of a responsive, high-bandwidth missile autopilot for airframes which have structural modes of unusually low frequency presents a challenging design task. Such systems are viable candidates for modern, state-space control design methods. The PC-MATLAB interactive software package provides an environment well-suited to the development of candidate linear control laws for flexible missile autopilots. The strengths of MATLAB include: (1) exceptionally high speed (MATLAB's version for 80386-based PC's offers benchmarks approaching minicomputer and mainframe performance); (2) ability to handle large design models of several hundred degrees of freedom, if necessary; and (3) broad extensibility through user-defined functions. To characterize MATLAB capabilities, a simplified design example is presented. This involves interactive definition of an observer-based state-space compensator for a flexible missile autopilot design task. MATLAB capabilities and limitations, in the context of this design task, are then summarized.

13. An Accelerator Control Middle Layer Using MATLAB

International Nuclear Information System (INIS)

Portmann, Gregory J.; Corbett, Jeff; Terebilo, Andrei

2005-01-01

Matlab is a matrix manipulation language originally developed to be a convenient language for using the LINPACK and EISPACK libraries. What makes Matlab so appealing for accelerator physics is the combination of a matrix oriented programming language, an active workspace for system variables, powerful graphics capability, built-in math libraries, and platform independence. A number of software toolboxes for accelerators have been written in Matlab--the Accelerator Toolbox (AT) for machine simulations, LOCO for accelerator calibration, Matlab Channel Access Toolbox (MCA) for EPICS connections, and the Middle Layer. This paper will describe the ''middle layer'' software toolbox that resides between the high-level control applications and the low-level accelerator control system. This software was a collaborative effort between ALS (LBNL) and SPEAR3 (SSRL) but easily ports to other machines. Five accelerators presently use this software. The high-level Middle Layer functionality includes energy ramp, configuration control (save/restore), global orbit correction, local photon beam steering, insertion device compensation, beam-based alignment, tune correction, response matrix measurement, and script-based programs for machine physics studies

14. Processing of hyperspectral medical images applications in dermatology using Matlab

CERN Document Server

Koprowski, Robert

2017-01-01

This book presents new methods of analyzing and processing hyperspectral medical images, which can be used in diagnostics, for example for dermatological images. The algorithms proposed are fully automatic and the results obtained are fully reproducible. Their operation was tested on a set of several thousands of hyperspectral images and they were implemented in Matlab. The presented source code can be used without licensing restrictions. This is a valuable resource for computer scientists, bioengineers, doctoral students, and dermatologists interested in contemporary analysis methods.

15. Efficient Resource Management in Cloud Computing

OpenAIRE

Rushikesh Shingade; Amit Patil; Shivam Suryawanshi; M. Venkatesan

2015-01-01

Cloud computing, one of the widely used technology to provide cloud services for users who are charged for receiving services. In the aspect of a maximum number of resources, evaluating the performance of Cloud resource management policies are difficult to optimize efficiently. There are different simulation toolkits available for simulation and modelling the Cloud computing environment like GridSim CloudAnalyst, CloudSim, GreenCloud, CloudAuction etc. In proposed Efficient Resource Manage...

16. Stress, strain, and structural dynamics an interactive handbook of formulas, solutions, and Matlab toolboxes

CERN Document Server

Yang, Bingen

2005-01-01

Stress, Strain, and Structural Dynamics is a comprehensive and definitive reference to statics and dynamics of solids and structures, including mechanics of materials, structural mechanics, elasticity, rigid-body dynamics, vibrations, structural dynamics, and structural controls. This text integrates the development of fundamental theories, formulas and mathematical models with user-friendly interactive computer programs, written in the powerful and popular MATLAB. This unique merger of technical referencing and interactive computing allows instant solution of a variety of engineering problems

17. MATLAB for laser speckle contrast analysis (LASCA): a practice-based approach

Science.gov (United States)

Postnikov, Eugene B.; Tsoy, Maria O.; Postnov, Dmitry E.

2018-04-01

Laser Speckle Contrast Analysis (LASCA) is one of the most powerful modern methods for revealing blood dynamics. The experimental design and theory for this method are well established, and the computational recipie is often regarded to be trivial. However, the achieved performance and spatial resolution may considerable differ for different implementations. We comprise a minireview of known approaches to the spatial laser speckle contrast data processing and their realization in MATLAB code providing an explicit correspondence to the mathematical representation, a discussion of available implementations. We also present the algorithm based on the 2D Haar wavelet transform, also supplied with the program code. This new method provides an opportunity to introduce horizontal, vertical and diagonal speckle contrasts; it may be used for processing highly anisotropic images of vascular trees. We provide the comparative analysis of the accuracy of vascular pattern detection and the processing times with a special attention to details of the used MATLAB procedures.

18. HEART: an automated beat-to-beat cardiovascular analysis package using Matlab.

Science.gov (United States)

Schroeder, M J Mark J; Perreault, Bill; Ewert, D L Daniel L; Koenig, S C Steven C

2004-07-01

A computer program is described for beat-to-beat analysis of cardiovascular parameters from high-fidelity pressure and flow waveforms. The Hemodynamic Estimation and Analysis Research Tool (HEART) is a post-processing analysis software package developed in Matlab that enables scientists and clinicians to document, load, view, calibrate, and analyze experimental data that have been digitally saved in ascii or binary format. Analysis routines include traditional hemodynamic parameter estimates as well as more sophisticated analyses such as lumped arterial model parameter estimation and vascular impedance frequency spectra. Cardiovascular parameter values of all analyzed beats can be viewed and statistically analyzed. An attractive feature of the HEART program is the ability to analyze data with visual quality assurance throughout the process, thus establishing a framework toward which Good Laboratory Practice (GLP) compliance can be obtained. Additionally, the development of HEART on the Matlab platform provides users with the flexibility to adapt or create study specific analysis files according to their specific needs. Copyright 2003 Elsevier Ltd.

19. Generalized Simulation Model for a Switched-Mode Power Supply Design Course Using MATLAB/SIMULINK

Science.gov (United States)

Liao, Wei-Hsin; Wang, Shun-Chung; Liu, Yi-Hua

2012-01-01

Switched-mode power supplies (SMPS) are becoming an essential part of many electronic systems as the industry drives toward miniaturization and energy efficiency. However, practical SMPS design courses are seldom offered. In this paper, a generalized MATLAB/SIMULINK modeling technique is first presented. A proposed practical SMPS design course at…

20. MATLAB-implemented estimation procedure for model-based assessment of hepatic insulin degradation from standard intravenous glucose tolerance test data.

Science.gov (United States)

Di Nardo, Francesco; Mengoni, Michele; Morettini, Micaela

2013-05-01

Present study provides a novel MATLAB-based parameter estimation procedure for individual assessment of hepatic insulin degradation (HID) process from standard frequently-sampled intravenous glucose tolerance test (FSIGTT) data. Direct access to the source code, offered by MATLAB, enabled us to design an optimization procedure based on the alternating use of Gauss-Newton's and Levenberg-Marquardt's algorithms, which assures the full convergence of the process and the containment of computational time. Reliability was tested by direct comparison with the application, in eighteen non-diabetic subjects, of well-known kinetic analysis software package SAAM II, and by application on different data. Agreement between MATLAB and SAAM II was warranted by intraclass correlation coefficients ≥0.73; no significant differences between corresponding mean parameter estimates and prediction of HID rate; and consistent residual analysis. Moreover, MATLAB optimization procedure resulted in a significant 51% reduction of CV% for the worst-estimated parameter by SAAM II and in maintaining all model-parameter CV% MATLAB-based procedure was suggested as a suitable tool for the individual assessment of HID process. Copyright © 2012 Elsevier Ireland Ltd. All rights reserved.

1. Object-oriented Matlab adaptive optics toolbox

Science.gov (United States)

Conan, R.; Correia, C.

2014-08-01

Object-Oriented Matlab Adaptive Optics (OOMAO) is a Matlab toolbox dedicated to Adaptive Optics (AO) systems. OOMAO is based on a small set of classes representing the source, atmosphere, telescope, wavefront sensor, Deformable Mirror (DM) and an imager of an AO system. This simple set of classes allows simulating Natural Guide Star (NGS) and Laser Guide Star (LGS) Single Conjugate AO (SCAO) and tomography AO systems on telescopes up to the size of the Extremely Large Telescopes (ELT). The discrete phase screens that make the atmosphere model can be of infinite size, useful for modeling system performance on large time scales. OOMAO comes with its own parametric influence function model to emulate different types of DMs. The cone effect, altitude thickness and intensity profile of LGSs are also reproduced. Both modal and zonal modeling approach are implemented. OOMAO has also an extensive library of theoretical expressions to evaluate the statistical properties of turbulence wavefronts. The main design characteristics of the OOMAO toolbox are object-oriented modularity, vectorized code and transparent parallel computing. OOMAO has been used to simulate and to design the Multi-Object AO prototype Raven at the Subaru telescope and the Laser Tomography AO system of the Giant Magellan Telescope. In this paper, a Laser Tomography AO system on an ELT is simulated with OOMAO. In the first part, we set-up the class parameters and we link the instantiated objects to create the source optical path. Then we build the tomographic reconstructor and write the script for the pseudo-open-loop controller.

2. Time series analysis of cholera in Matlab, Bangladesh, during 1988-2001.

Science.gov (United States)

2013-03-01

The study examined the impact of in-situ climatic and marine environmental variability on cholera incidence in an endemic area of Bangladesh and developed a forecasting model for understanding the magnitude of incidence. Diarrhoea surveillance data collected between 1988 and 2001 were obtained from a field research site in Matlab, Bangladesh. Cholera cases were defined as Vibrio cholerae O1 isolated from faecal specimens of patients who sought care at treatment centres serving the Matlab population. Cholera incidence for 168 months was correlated with remotely-sensed sea-surface temperature (SST) and in-situ environmental data, including rainfall and ambient temperature. A seasonal autoregressive integrated moving average (SARIMA) model was used for determining the impact of climatic and environmental variability on cholera incidence and evaluating the ability of the model to forecast the magnitude of cholera. There were 4,157 cholera cases during the study period, with an average of 1.4 cases per 1,000 people. Since monthly cholera cases varied significantly by month, it was necessary to stabilize the variance of cholera incidence by computing the natural logarithm to conduct the analysis. The SARIMA model shows temporal clustering of cholera at one- and 12-month lags. There was a 6% increase in cholera incidence with a minimum temperature increase of one degree celsius in the current month. For increase of SST by one degree celsius, there was a 25% increase in the cholera incidence at currrent month and 18% increase in the cholera incidence at two months. Rainfall did not influenc to cause variation in cholera incidence during the study period. The model forecast the fluctuation of cholera incidence in Matlab reasonably well (Root mean square error, RMSE: 0.108). Thus, the ambient and sea-surface temperature-based model could be used in forecasting cholera outbreaks in Matlab.

3. OXSA: An open-source magnetic resonance spectroscopy analysis toolbox in MATLAB.

Directory of Open Access Journals (Sweden)

Lucian A B Purvis

Full Text Available In vivo magnetic resonance spectroscopy provides insight into metabolism in the human body. New acquisition protocols are often proposed to improve the quality or efficiency of data collection. Processing pipelines must also be developed to use these data optimally. Current fitting software is either targeted at general spectroscopy fitting, or for specific protocols. We therefore introduce the MATLAB-based OXford Spectroscopy Analysis (OXSA toolbox to allow researchers to rapidly develop their own customised processing pipelines. The toolbox aims to simplify development by: being easy to install and use; seamlessly importing Siemens Digital Imaging and Communications in Medicine (DICOM standard data; allowing visualisation of spectroscopy data; offering a robust fitting routine; flexibly specifying prior knowledge when fitting; and allowing batch processing of spectra. This article demonstrates how each of these criteria have been fulfilled, and gives technical details about the implementation in MATLAB. The code is freely available to download from https://github.com/oxsatoolbox/oxsa.

4. OXSA: An open-source magnetic resonance spectroscopy analysis toolbox in MATLAB.

Science.gov (United States)

Purvis, Lucian A B; Clarke, William T; Biasiolli, Luca; Valkovič, Ladislav; Robson, Matthew D; Rodgers, Christopher T

2017-01-01

In vivo magnetic resonance spectroscopy provides insight into metabolism in the human body. New acquisition protocols are often proposed to improve the quality or efficiency of data collection. Processing pipelines must also be developed to use these data optimally. Current fitting software is either targeted at general spectroscopy fitting, or for specific protocols. We therefore introduce the MATLAB-based OXford Spectroscopy Analysis (OXSA) toolbox to allow researchers to rapidly develop their own customised processing pipelines. The toolbox aims to simplify development by: being easy to install and use; seamlessly importing Siemens Digital Imaging and Communications in Medicine (DICOM) standard data; allowing visualisation of spectroscopy data; offering a robust fitting routine; flexibly specifying prior knowledge when fitting; and allowing batch processing of spectra. This article demonstrates how each of these criteria have been fulfilled, and gives technical details about the implementation in MATLAB. The code is freely available to download from https://github.com/oxsatoolbox/oxsa.

5. Computation of the efficiency distribution of a multichannel focusing collimator

International Nuclear Information System (INIS)

Balasubramanian, A.; Venkateswaran, T.V.

1977-01-01

This article describes two computer methods of calculating the point source efficiency distribution functions of a focusing collimator with round tapered holes. The first method which computes only the geometric efficiency distribution is adequate for low energy collimators while the second method which computes both geometric and penetration efficiencies can be made use of for medium and high energy collimators. The scatter contribution to the efficiency is not taken into account. In the first method the efficiency distribution of a single cone of the collimator is obtained and the data are used for computing the distribution of the whole collimator. For high energy collimator the entire detector region is imagined to be divided into elemental areas. Efficiency of the elemental area is computed after suitably weighting for the penetration within the collimator septa, which is determined by three dimensional geometric techniques. The method of computing the line source efficiency distribution from point source distribution is also explained. The formulations have been tested by computing the efficiency distribution of several commercial collimators and collimators fabricated by us. (Auth.)

6. Efficient Multi-Party Computation over Rings

DEFF Research Database (Denmark)

Cramer, Ronald; Fehr, Serge; Ishai, Yuval

2003-01-01

Secure multi-party computation (MPC) is an active research area, and a wide range of literature can be found nowadays suggesting improvements and generalizations of existing protocols in various directions. However, all current techniques for secure MPC apply to functions that are represented by ...... the usefulness of the above results by presenting a novel application of MPC over (non-field) rings to the round-efficient secure computation of the maximum function. Basic Research in Computer Science (www.brics.dk), funded by the Danish National Research Foundation.......Secure multi-party computation (MPC) is an active research area, and a wide range of literature can be found nowadays suggesting improvements and generalizations of existing protocols in various directions. However, all current techniques for secure MPC apply to functions that are represented...... by (boolean or arithmetic) circuits over finite fields. We are motivated by two limitations of these techniques: – Generality. Existing protocols do not apply to computation over more general algebraic structures (except via a brute-force simulation of computation in these structures). – Efficiency. The best...

7. Efficient quantum computing with weak measurements

International Nuclear Information System (INIS)

Lund, A P

2011-01-01

Projective measurements with high quantum efficiency are often assumed to be required for efficient circuit-based quantum computing. We argue that this is not the case and show that the fact that they are not required was actually known previously but was not deeply explored. We examine this issue by giving an example of how to perform the quantum-ordering-finding algorithm efficiently using non-local weak measurements considering that the measurements used are of bounded weakness and some fixed but arbitrary probability of success less than unity is required. We also show that it is possible to perform the same computation with only local weak measurements, but this must necessarily introduce an exponential overhead.

8. Computational efficiency for the surface renewal method

Science.gov (United States)

2018-04-01

Measuring surface fluxes using the surface renewal (SR) method requires programmatic algorithms for tabulation, algebraic calculation, and data quality control. A number of different methods have been published describing automated calibration of SR parameters. Because the SR method utilizes high-frequency (10 Hz+) measurements, some steps in the flux calculation are computationally expensive, especially when automating SR to perform many iterations of these calculations. Several new algorithms were written that perform the required calculations more efficiently and rapidly, and that tested for sensitivity to length of flux averaging period, ability to measure over a large range of lag timescales, and overall computational efficiency. These algorithms utilize signal processing techniques and algebraic simplifications that demonstrate simple modifications that dramatically improve computational efficiency. The results here complement efforts by other authors to standardize a robust and accurate computational SR method. Increased speed of computation time grants flexibility to implementing the SR method, opening new avenues for SR to be used in research, for applied monitoring, and in novel field deployments.

9. Subband/Transform MATLAB Functions For Processing Images

Science.gov (United States)

Glover, D.

1995-01-01

SUBTRANS software is package of routines implementing image-data-processing functions for use with MATLAB*(TM) software. Provides capability to transform image data with block transforms and to produce spatial-frequency subbands of transformed data. Functions cascaded to provide further decomposition into more subbands. Also used in image-data-compression systems. For example, transforms used to prepare data for lossy compression. Written for use in MATLAB mathematical-analysis environment.

10. MATLAB Simulation of Photovoltaic and Photovoltaic/Thermal Systems Performance

Science.gov (United States)

Nasir, Farah H. M.; Husaini, Yusnira

2018-03-01

The efficiency of the photovoltaic reduces when the photovoltaic cell temperature increased due to solar irradiance. One solution is come up with the cooling system photovoltaic system. This combination is forming the photovoltaic-thermal (PV/T) system. Not only will it generate electricity also heat at the same time. The aim of this research is to focus on the modeling and simulation of photovoltaic (PV) and photovoltaic-thermal (PV/T) electrical performance by using single-diode equivalent circuit model. Both PV and PV/T models are developed in Matlab/Simulink. By providing the cooling system in PV/T, the efficiency of the system can be increased by decreasing the PV cell temperature. The maximum thermal, electrical and total efficiency values of PV/T in the present research are 35.18%, 15.56% and 50.74% at solar irradiance of 400 W/m2, mass flow rate of 0.05kgs-1 and inlet temperature of 25 °C respectively has been obtained. The photovoltaic-thermal shows that the higher efficiency performance compared to the photovoltaic system.

11. Experiences with Matlab and VRML in Functional Neuroimaging Visualizations

DEFF Research Database (Denmark)

Nielsen, Finn Årup; Hansen, Lars Kai

2000-01-01

We describe some experiences with Matlab and VRML. We are developing a toolbox for neuroinformatics and describe some of the functionalities we have implemented or will implement and how Matlab and VRML support the implementation....

12. The pipeline system for Octave and Matlab (PSOM): a lightweight scripting framework and execution engine for scientific workflows.

Science.gov (United States)

Bellec, Pierre; Lavoie-Courchesne, Sébastien; Dickinson, Phil; Lerch, Jason P; Zijdenbos, Alex P; Evans, Alan C

2012-01-01

The analysis of neuroimaging databases typically involves a large number of inter-connected steps called a pipeline. The pipeline system for Octave and Matlab (PSOM) is a flexible framework for the implementation of pipelines in the form of Octave or Matlab scripts. PSOM does not introduce new language constructs to specify the steps and structure of the workflow. All steps of analysis are instead described by a regular Matlab data structure, documenting their associated command and options, as well as their input, output, and cleaned-up files. The PSOM execution engine provides a number of automated services: (1) it executes jobs in parallel on a local computing facility as long as the dependencies between jobs allow for it and sufficient resources are available; (2) it generates a comprehensive record of the pipeline stages and the history of execution, which is detailed enough to fully reproduce the analysis; (3) if an analysis is started multiple times, it executes only the parts of the pipeline that need to be reprocessed. PSOM is distributed under an open-source MIT license and can be used without restriction for academic or commercial projects. The package has no external dependencies besides Matlab or Octave, is straightforward to install and supports of variety of operating systems (Linux, Windows, Mac). We ran several benchmark experiments on a public database including 200 subjects, using a pipeline for the preprocessing of functional magnetic resonance images (fMRI). The benchmark results showed that PSOM is a powerful solution for the analysis of large databases using local or distributed computing resources.

13. Photogrammetric 3d Reconstruction in Matlab: Development of a Free Tool

Science.gov (United States)

Masiero, A.

2017-11-01

This paper presents the current state of development of a free Matlab tool for photogrammetric reconstruction developed at the University of Padova, Italy. The goal of this software is mostly educational, i.e. allowing students to have a close look to the specific steps which lead to the computation of a dense point cloud. As most of recently developed photogrammetric softwares, it is based on a Structure from Motion approach. Despite being mainly motivated by educational purposes, certain implementation details are clearly inspired by recent research works, e.g. limiting the computational burden of the feature matching by determining a suboptimal set of features to be considered, using information provided by external sensors to ease the matching process.

14. Bifurcation software in Matlab with applications in neuronal modeling.

Science.gov (United States)

Govaerts, Willy; Sautois, Bart

2005-02-01

Many biological phenomena, notably in neuroscience, can be modeled by dynamical systems. We describe a recent improvement of a Matlab software package for dynamical systems with applications to modeling single neurons and all-to-all connected networks of neurons. The new software features consist of an object-oriented approach to bifurcation computations and the partial inclusion of C-code to speed up the computation. As an application, we study the origin of the spiking behaviour of neurons when the equilibrium state is destabilized by an incoming current. We show that Class II behaviour, i.e. firing with a finite frequency, is possible even if the destabilization occurs through a saddle-node bifurcation. Furthermore, we show that synchronization of an all-to-all connected network of such neurons with only excitatory connections is also possible in this case.

15. Optimization of Grillages Using Genetic Algorithms for Integrating Matlab and Fortran Environments

Directory of Open Access Journals (Sweden)

Darius Mačiūnas

2013-02-01

Full Text Available The purpose of the paper is to present technology applied for the global optimization of grillage-type pile foundations (further grillages. The goal of optimization is to obtain the optimal layout of pile placement in the grillages. The problem can be categorized as a topology optimization problem. The objective function is comprised of maximum reactive force emerging in a pile. The reactive force is minimized during the procedure of optimization during which variables enclose the positions of piles beneath connecting beams. Reactive forces in all piles are computed utilizing an original algorithm implemented in the Fortran programming language. The algorithm is integrated into the MatLab environment where the optimization procedure is executed utilizing a genetic algorithm. The article also describes technology enabling the integration of MatLab and Fortran environments. The authors seek to evaluate the quality of a solution to the problem analyzing experimental results obtained applying the proposed technology.

16. Optimization of Grillages Using Genetic Algorithms for Integrating Matlab and Fortran Environments

Directory of Open Access Journals (Sweden)

Darius Mačiūnas

2012-12-01

Full Text Available The purpose of the paper is to present technology applied for the global optimization of grillage-type pile foundations (further grillages. The goal of optimization is to obtain the optimal layout of pile placement in the grillages. The problem can be categorized as a topology optimization problem. The objective function is comprised of maximum reactive force emerging in a pile. The reactive force is minimized during the procedure of optimization during which variables enclose the positions of piles beneath connecting beams. Reactive forces in all piles are computed utilizing an original algorithm implemented in the Fortran programming language. The algorithm is integrated into the MatLab environment where the optimization procedure is executed utilizing a genetic algorithm. The article also describes technology enabling the integration of MatLab and Fortran environments. The authors seek to evaluate the quality of a solution to the problem analyzing experimental results obtained applying the proposed technology.

17. Digital signal processing using MATLAB

CERN Document Server

Schilling, Robert L

2016-01-01

Focus on the development, implementation, and application of modern DSP techniques with DIGITAL SIGNAL PROCESSING USING MATLAB(R), 3E. Written in an engaging, informal style, this edition immediately captures your attention and encourages you to explore each critical topic. Every chapter starts with a motivational section that highlights practical examples and challenges that you can solve using techniques covered in the chapter. Each chapter concludes with a detailed case study example, a chapter summary with learning outcomes, and practical homework problems cross-referenced to specific chapter sections for your convenience. DSP Companion software accompanies each book to enable further investigation. The DSP Companion software operates with MATLAB(R) and provides intriguing demonstrations as well as interactive explorations of analysis and design concepts.

18. Visual media processing using Matlab beginner's guide

CERN Document Server

Siogkas, George

2013-01-01

Written in a friendly, Beginner's Guide format, showing the user how to use the digital media aspects of Matlab (image, video, sound) in a practical, tutorial-based style.This is great for novice programmers in any language who would like to use Matlab as a tool for their image and video processing needs, and also comes in handy for photographers or video editors with even less programming experience wanting to find an all-in-one tool for their tasks.

19. Computational statistics handbook with Matlab

CERN Document Server

Martinez, Wendy L

2007-01-01

Prefaces Introduction What Is Computational Statistics? An Overview of the Book Probability Concepts Introduction Probability Conditional Probability and Independence Expectation Common Distributions Sampling Concepts Introduction Sampling Terminology and Concepts Sampling Distributions Parameter Estimation Empirical Distribution Function Generating Random Variables Introduction General Techniques for Generating Random Variables Generating Continuous Random Variables Generating Discrete Random Variables Exploratory Data Analysis Introduction Exploring Univariate Data Exploring Bivariate and Trivariate Data Exploring Multidimensional Data Finding Structure Introduction Projecting Data Principal Component Analysis Projection Pursuit EDA Independent Component Analysis Grand Tour Nonlinear Dimensionality Reduction Monte Carlo Methods for Inferential Statistics Introduction Classical Inferential Statistics Monte Carlo Methods for Inferential Statist...

20. Regularization Tools Version 3.0 for Matlab 5.2

DEFF Research Database (Denmark)

Hansen, Per Christian

1999-01-01

This communication describes Version 3.0 of Regularization Tools, a Matlab package for analysis and solution of discrete ill-posed problems.......This communication describes Version 3.0 of Regularization Tools, a Matlab package for analysis and solution of discrete ill-posed problems....

1. MultiElec: A MATLAB Based Application for MEA Data Analysis.

Science.gov (United States)

Georgiadis, Vassilis; Stephanou, Anastasis; Townsend, Paul A; Jackson, Thomas R

2015-01-01

We present MultiElec, an open source MATLAB based application for data analysis of microelectrode array (MEA) recordings. MultiElec displays an extremely user-friendly graphic user interface (GUI) that allows the simultaneous display and analysis of voltage traces for 60 electrodes and includes functions for activation-time determination, the production of activation-time heat maps with activation time and isoline display. Furthermore, local conduction velocities are semi-automatically calculated along with their corresponding vector plots. MultiElec allows ad hoc signal suppression, enabling the user to easily and efficiently handle signal artefacts and for incomplete data sets to be analysed. Voltage traces and heat maps can be simply exported for figure production and presentation. In addition, our platform is able to produce 3D videos of signal progression over all 60 electrodes. Functions are controlled entirely by a single GUI with no need for command line input or any understanding of MATLAB code. MultiElec is open source under the terms of the GNU General Public License as published by the Free Software Foundation, version 3. Both the program and source code are available to download from http://www.cancer.manchester.ac.uk/MultiElec/.

2. RenderToolbox3: MATLAB tools that facilitate physically based stimulus rendering for vision research.

Science.gov (United States)

Heasly, Benjamin S; Cottaris, Nicolas P; Lichtman, Daniel P; Xiao, Bei; Brainard, David H

2014-02-07

RenderToolbox3 provides MATLAB utilities and prescribes a workflow that should be useful to researchers who want to employ graphics in the study of vision and perhaps in other endeavors as well. In particular, RenderToolbox3 facilitates rendering scene families in which various scene attributes and renderer behaviors are manipulated parametrically, enables spectral specification of object reflectance and illuminant spectra, enables the use of physically based material specifications, helps validate renderer output, and converts renderer output to physical units of radiance. This paper describes the design and functionality of the toolbox and discusses several examples that demonstrate its use. We have designed RenderToolbox3 to be portable across computer hardware and operating systems and to be free and open source (except for MATLAB itself). RenderToolbox3 is available at https://github.com/DavidBrainard/RenderToolbox3.

3. Transportation channels calculation method in MATLAB

International Nuclear Information System (INIS)

Averyanov, G.P.; Budkin, V.A.; Dmitrieva, V.V.; Osadchuk, I.O.; Bashmakov, Yu.A.

2014-01-01

Output devices and charged particles transport channels are necessary components of any modern particle accelerator. They differ both in sizes and in terms of focusing elements depending on particle accelerator type and its destination. A package of transport line designing codes for magnet optical channels in MATLAB environment is presented in this report. Charged particles dynamics in a focusing channel can be studied easily by means of the matrix technique. MATLAB usage is convenient because its information objects are matrixes. MATLAB allows the use the modular principle to build the software package. Program blocks are small in size and easy to use. They can be executed separately or commonly. A set of codes has a user-friendly interface. Transport channel construction consists of focusing lenses (doublets and triplets). The main of the magneto-optical channel parameters are total length and lens position and parameters of the output beam in the phase space (channel acceptance, beam emittance - beam transverse dimensions, particles divergence and image stigmaticity). Choice of the channel operation parameters is based on the conditions for satisfying mutually competing demands. And therefore the channel parameters calculation is carried out by using the search engine optimization techniques.

4. MATLAB-Like Scripting of Java Scientific Libraries in ScalaLab

Directory of Open Access Journals (Sweden)

2014-01-01

Full Text Available Although there are a lot of robust and effective scientific libraries in Java, the utilization of these libraries in pure Java is difficult and cumbersome, especially for the average scientist that does not expertise in software development. We illustrate that ScalaLab presents an easier and productive MATLAB like front end. Also, the main strengths and weaknesses of the core Java libraries of ScalaLab are elaborated. Since performance is of paramount importance for scientific computation, the article discusses extensively performance aspects of the ScalaLab environment. Also, Java bytecode performance is compared to native code.

5. An Implementation of Parallel and Networked Computing Schemes for the Real-Time Image Reconstruction Based on Electrical Tomography

International Nuclear Information System (INIS)

Park, Sook Hee

2001-02-01

boost the reliability and high computation speed of basic primitive matrix operations. The DLL(Dynamic Link Library) is a good candidate for a Matlab programmer to conveniently call the new library, since the original Matlab code does not need to be changed. The DLL library receives Matlab array represented as mxArray, and converts it into the appropriate C language structure after partitioning the array for the parallel operation. Then the DLL calls Matlab's efficient C language library, which is enabled by creating the definition files as well as including the Matlab library into the Visual C 6.0 project file. Finally, the partial results are merged at the shared memory, so the DLL integrates them to pass the final result to the caller residing in Matlab code. In this procedure, the elimination of the complex Matlab interpreting step, in addition to the parallel programming. According to the implementation described as above, matrix multiplication, inverse, pseudo inverse, and Jacobian are implemented. The first two DLLs speed up the computation by the effect of pure parallel processing. Pseudo inverse can enhance the performance based on the previous parallel procedures if and only if the given matrix is full-rank one, as data dependancy hinders the parallel computing otherwise. The enhancement of Jacobian code owes to eliminating the unnecessary code rather than parallel processing, as the operation contains so much overhead. Also implemented are the network version libraries. However, the speed is not so good as the original code because there is network speed limitation. With the better network interface, the speed up can be expected. The performance of the implemented parallel libraries has been assessed by directly measuring the execution time comparing with the original Matlab code. And the calculating times of matrix multiplications, inverse, and pseudo inverse have been reduced to 59.4 %, 34.8 % and 52 %, respectively. The execution time of Jacobian is

6. FocusStack and StimServer: a new open source MATLAB toolchain for visual stimulation and analysis of two-photon calcium neuronal imaging data.

Science.gov (United States)

Muir, Dylan R; Kampa, Björn M

2014-01-01

Two-photon calcium imaging of neuronal responses is an increasingly accessible technology for probing population responses in cortex at single cell resolution, and with reasonable and improving temporal resolution. However, analysis of two-photon data is usually performed using ad-hoc solutions. To date, no publicly available software exists for straightforward analysis of stimulus-triggered two-photon imaging experiments. In addition, the increasing data rates of two-photon acquisition systems imply increasing cost of computing hardware required for in-memory analysis. Here we present a Matlab toolbox, FocusStack, for simple and efficient analysis of two-photon calcium imaging stacks on consumer-level hardware, with minimal memory footprint. We also present a Matlab toolbox, StimServer, for generation and sequencing of visual stimuli, designed to be triggered over a network link from a two-photon acquisition system. FocusStack is compatible out of the box with several existing two-photon acquisition systems, and is simple to adapt to arbitrary binary file formats. Analysis tools such as stack alignment for movement correction, automated cell detection and peri-stimulus time histograms are already provided, and further tools can be easily incorporated. Both packages are available as publicly-accessible source-code repositories.

7. Modelling organs, tissues, cells and devices using Matlab and Comsol multiphysics

CERN Document Server

Dokos, Socrates

2017-01-01

This book presents a theoretical and practical overview of computational modeling in bioengineering, focusing on a range of applications including electrical stimulation of neural and cardiac tissue, implantable drug delivery, cancer therapy, biomechanics, cardiovascular dynamics, as well as fluid-structure interaction for modelling of organs, tissues, cells and devices. It covers the basic principles of modeling and simulation with ordinary and partial differential equations using MATLAB and COMSOL Multiphysics numerical software. The target audience primarily comprises postgraduate students and researchers, but the book may also be beneficial for practitioners in the medical device industry.

8. Development and validation of a detailed TRNSYS-Matlab model for large solar collector fields for district heating applications

DEFF Research Database (Denmark)

Bava, Federico; Furbo, Simon

2017-01-01

This study describes the development of a detailed TRNSYS-Matlab model to simulate the behavior of a large solar collector field for district heating application. The model includes and investigates aspects which are not always considered by simpler models, such as flow distribution...... programming and computing time. Thermal capacity was worth being considered only for the bulkier components, such as the longer distribution and transmission pipes. The actual control strategy, which regulates the flow rates in the solar heating plant, was accurately reproduced in the model, as proved...... in the different rows, effect of the flow regime on the collector efficiency, thermal capacity of the components and effect of shadows from row to row. The model was compared with measurements from a solar collector field and the impact of each aspect was evaluated. A good agreement between model and measurements...

9. Kinematic analysis of the finger exoskeleton using MATLAB/Simulink.

Science.gov (United States)

Nasiłowski, Krzysztof; Awrejcewicz, Jan; Lewandowski, Donat

2014-01-01

A paralyzed and not fully functional part of human body can be supported by the properly designed exoskeleton system with motoric abilities. It can help in rehabilitation, or movement of a disabled/paralyzed limb. Both suitably selected geometry and specialized software are studied applying the MATLAB environment. A finger exoskeleton was the base for MATLAB/Simulink model. Specialized software, such as MATLAB/Simulink give us an opportunity to optimize calculation reaching precise results, which help in next steps of design process. The calculations carried out yield information regarding movement relation between three functionally connected actuators and showed distance and velocity changes during the whole simulation time.

10. A Distributed Snapshot Protocol for Efficient Artificial Intelligence Computation in Cloud Computing Environments

Directory of Open Access Journals (Sweden)

JongBeom Lim

2018-01-01

Full Text Available Many artificial intelligence applications often require a huge amount of computing resources. As a result, cloud computing adoption rates are increasing in the artificial intelligence field. To support the demand for artificial intelligence applications and guarantee the service level agreement, cloud computing should provide not only computing resources but also fundamental mechanisms for efficient computing. In this regard, a snapshot protocol has been used to create a consistent snapshot of the global state in cloud computing environments. However, the existing snapshot protocols are not optimized in the context of artificial intelligence applications, where large-scale iterative computation is the norm. In this paper, we present a distributed snapshot protocol for efficient artificial intelligence computation in cloud computing environments. The proposed snapshot protocol is based on a distributed algorithm to run interconnected multiple nodes in a scalable fashion. Our snapshot protocol is able to deal with artificial intelligence applications, in which a large number of computing nodes are running. We reveal that our distributed snapshot protocol guarantees the correctness, safety, and liveness conditions.

11. Deterministic modelling and stochastic simulation of biochemical pathways using MATLAB.

Science.gov (United States)

Ullah, M; Schmidt, H; Cho, K H; Wolkenhauer, O

2006-03-01

The analysis of complex biochemical networks is conducted in two popular conceptual frameworks for modelling. The deterministic approach requires the solution of ordinary differential equations (ODEs, reaction rate equations) with concentrations as continuous state variables. The stochastic approach involves the simulation of differential-difference equations (chemical master equations, CMEs) with probabilities as variables. This is to generate counts of molecules for chemical species as realisations of random variables drawn from the probability distribution described by the CMEs. Although there are numerous tools available, many of them free, the modelling and simulation environment MATLAB is widely used in the physical and engineering sciences. We describe a collection of MATLAB functions to construct and solve ODEs for deterministic simulation and to implement realisations of CMEs for stochastic simulation using advanced MATLAB coding (Release 14). The program was successfully applied to pathway models from the literature for both cases. The results were compared to implementations using alternative tools for dynamic modelling and simulation of biochemical networks. The aim is to provide a concise set of MATLAB functions that encourage the experimentation with systems biology models. All the script files are available from www.sbi.uni-rostock.de/ publications_matlab-paper.html.

12. Introduction to fuzzy logic using Matlab

CERN Document Server

Sivanandam, SN; Deepa, S N

2006-01-01

Fuzzy Logic, at present is a hot topic, among academicians as well various programmers. This book is provided to give a broad, in-depth overview of the field of Fuzzy Logic. The basic principles of Fuzzy Logic are discussed in detail with various solved examples. The different approaches and solutions to the problems given in the book are well balanced and pertinent to the Fuzzy Logic research projects. The applications of Fuzzy Logic are also dealt to make the readers understand the concept of Fuzzy Logic. The solutions to the problems are programmed using MATLAB 6.0 and the simulated results are given. The MATLAB Fuzzy Logic toolbox is provided for easy reference.

13. Efficient computation of Laguerre polynomials

NARCIS (Netherlands)

A. Gil (Amparo); J. Segura (Javier); N.M. Temme (Nico)

2017-01-01

textabstractAn efficient algorithm and a Fortran 90 module (LaguerrePol) for computing Laguerre polynomials . Ln(α)(z) are presented. The standard three-term recurrence relation satisfied by the polynomials and different types of asymptotic expansions valid for . n large and . α small, are used

14. MatLab 1a

DEFF Research Database (Denmark)

Kristiansen, Heidi; Kaas, Thomas; Freil, Ole

Bogen indeholder fire kapitler: ’Tæl og brug tal’, ’Undersøg figurer’, ’Plus- og minusproblemer’ og ’Statistik og chance’. MATLAB: •bygger på en undersøgende og problemorienteret tilgang til matematikken •understøtter læringsmålstyret undervisning •har fokus på faglige samtaler og undersøgelser...

15. ImageJ-MATLAB: a bidirectional framework for scientific image analysis interoperability.

Science.gov (United States)

Hiner, Mark C; Rueden, Curtis T; Eliceiri, Kevin W

2017-02-15

ImageJ-MATLAB is a lightweight Java library facilitating bi-directional interoperability between MATLAB and ImageJ. By defining a standard for translation between matrix and image data structures, researchers are empowered to select the best tool for their image-analysis tasks. Freely available extension to ImageJ2 ( http://imagej.net/Downloads ). Installation and use instructions available at http://imagej.net/MATLAB_Scripting. Tested with ImageJ 2.0.0-rc-54 , Java 1.8.0_66 and MATLAB R2015b. eliceiri@wisc.edu. Supplementary data are available at Bioinformatics online. © The Author 2016. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com

16. A computerized glow curve analysis (GCA) method for WinREMS thermoluminescent dosimeter data using MATLAB

International Nuclear Information System (INIS)

Harvey, John A.; Rodrigues, Miesher L.; Kearfott, Kimberlee J.

2011-01-01

A computerized glow curve analysis (GCA) program for handling of thermoluminescence data originating from WinREMS is presented. The MATLAB program fits the glow peaks using the first-order kinetics model. Tested materials are LiF:Mg,Ti, CaF 2 :Dy, CaF 2 :Tm, CaF 2 :Mn, LiF:Mg,Cu,P, and CaSO 4 :Dy, with most having an average figure of merit (FOM) of 1.3% or less, with CaSO 4 :Dy 2.2% or less. Output is a list of fit parameters, peak areas, and graphs for each fit, evaluating each glow curve in 1.5 s or less. - Highlights: → Robust algorithm for performing thermoluminescent dosimeter glow curve analysis. → Written in MATLAB so readily implemented on variety of computers. → Usage of figure of merit demonstrated for six different materials.

17. Efficient GPU-based skyline computation

DEFF Research Database (Denmark)

Bøgh, Kenneth Sejdenfaden; Assent, Ira; Magnani, Matteo

2013-01-01

The skyline operator for multi-criteria search returns the most interesting points of a data set with respect to any monotone preference function. Existing work has almost exclusively focused on efficiently computing skylines on one or more CPUs, ignoring the high parallelism possible in GPUs. In...

18. ‘PhysTrack’: a Matlab based environment for video tracking of kinematics in the physics laboratory

Science.gov (United States)

2017-07-01

In the past two decades, several computer software tools have been developed to investigate the motion of moving bodies in physics laboratories. In this article we report a Matlab based video tracking library, PhysTrack, primarily designed to investigate kinematics. We compare PhysTrack with other commonly available video tracking tools and outline its salient features. The general methodology of the whole video tracking process is described with a step by step explanation of several functionalities. Furthermore, results of some real physics experiments are also provided to demonstrate the working of the automated video tracking, data extraction, data analysis and presentation tools that come with this development environment. We believe that PhysTrack will be valuable for the large community of physics teachers and students already employing Matlab.

19. Modeling Techniques for a Computational Efficient Dynamic Turbofan Engine Model

Directory of Open Access Journals (Sweden)

Rory A. Roberts

2014-01-01

Full Text Available A transient two-stream engine model has been developed. Individual component models developed exclusively in MATLAB/Simulink including the fan, high pressure compressor, combustor, high pressure turbine, low pressure turbine, plenum volumes, and exit nozzle have been combined to investigate the behavior of a turbofan two-stream engine. Special attention has been paid to the development of transient capabilities throughout the model, increasing physics model, eliminating algebraic constraints, and reducing simulation time through enabling the use of advanced numerical solvers. The lessening of computation time is paramount for conducting future aircraft system-level design trade studies and optimization. The new engine model is simulated for a fuel perturbation and a specified mission while tracking critical parameters. These results, as well as the simulation times, are presented. The new approach significantly reduces the simulation time.

20. Efficient Secure Multiparty Subset Computation

Directory of Open Access Journals (Sweden)

Sufang Zhou

2017-01-01

Full Text Available Secure subset problem is important in secure multiparty computation, which is a vital field in cryptography. Most of the existing protocols for this problem can only keep the elements of one set private, while leaking the elements of the other set. In other words, they cannot solve the secure subset problem perfectly. While a few studies have addressed actual secure subsets, these protocols were mainly based on the oblivious polynomial evaluations with inefficient computation. In this study, we first design an efficient secure subset protocol for sets whose elements are drawn from a known set based on a new encoding method and homomorphic encryption scheme. If the elements of the sets are taken from a large domain, the existing protocol is inefficient. Using the Bloom filter and homomorphic encryption scheme, we further present an efficient protocol with linear computational complexity in the cardinality of the large set, and this is considered to be practical for inputs consisting of a large number of data. However, the second protocol that we design may yield a false positive. This probability can be rapidly decreased by reexecuting the protocol with different hash functions. Furthermore, we present the experimental performance analyses of these protocols.

1. MatLab 0. Matematiklaboratoriet

DEFF Research Database (Denmark)

Kristiansen, Heidi; Kaas, Thomas; Freil, Ole

Bogen indeholder fem kapitler: ’Tælle og tal’, ’Figurer og mønstre’, ’Hvor mange?’, ’Måling’ og ’Data og diagrammer’. MATLAB: •bygger på en undersøgende og problemorienteret tilgang til matematikken •understøtter læringsmålstyret undervisning •har fokus på faglige samtaler og undersøgelser, der...

2. Piezoelectric Actuator Modeling Using MSC/NASTRAN and MATLAB

Science.gov (United States)

Reaves, Mercedes C.; Horta, Lucas G.

2003-01-01

This paper presents a procedure for modeling structures containing piezoelectric actuators using MSCMASTRAN and MATLAB. The paper describes the utility and functionality of one set of validated modeling tools. The tools described herein use MSCMASTRAN to model the structure with piezoelectric actuators and a thermally induced strain to model straining of the actuators due to an applied voltage field. MATLAB scripts are used to assemble the dynamic equations and to generate frequency response functions. The application of these tools is discussed using a cantilever aluminum beam with a surface mounted piezoelectric actuator as a sample problem. Software in the form of MSCINASTRAN DMAP input commands, MATLAB scripts, and a step-by-step procedure to solve the example problem are provided. Analysis results are generated in terms of frequency response functions from deflection and strain data as a function of input voltage to the actuator.

3. Introduction to multifractal detrended fluctuation analysis in matlab.

Science.gov (United States)

Ihlen, Espen A F

2012-01-01

Fractal structures are found in biomedical time series from a wide range of physiological phenomena. The multifractal spectrum identifies the deviations in fractal structure within time periods with large and small fluctuations. The present tutorial is an introduction to multifractal detrended fluctuation analysis (MFDFA) that estimates the multifractal spectrum of biomedical time series. The tutorial presents MFDFA step-by-step in an interactive Matlab session. All Matlab tools needed are available in Introduction to MFDFA folder at the website www.ntnu.edu/inm/geri/software. MFDFA are introduced in Matlab code boxes where the reader can employ pieces of, or the entire MFDFA to example time series. After introducing MFDFA, the tutorial discusses the best practice of MFDFA in biomedical signal processing. The main aim of the tutorial is to give the reader a simple self-sustained guide to the implementation of MFDFA and interpretation of the resulting multifractal spectra.

4. MATLAB implementation of satellite positioning error overbounding by generalized Pareto distribution

Science.gov (United States)

2018-02-01

In the satellite navigation community, error overbound has been implemented in the process of integrity monitoring. In this work, MATLAB programming is used to implement the overbounding of satellite positioning error CDF. Using a trajectory of reference, the horizontal position errors (HPE) are computed and its non-parametric distribution function is given by the empirical Cumulative Distribution Function (ECDF). According to the results, these errors have a heavy-tailed distribution. Sınce the ECDF of the HPE in urban environment is not Gaussian distributed, the ECDF is overbound with the CDF of the generalized Pareto distribution (GPD).

5. New approach for calibration the efficiency of HPGe detectors

International Nuclear Information System (INIS)

Alnour, I.A.; Wagiran, H.; Suhaimi Hamzah; Siong, W.B.; Mohd Suhaimi Elias

2013-01-01

Full-text: This work evaluates the efficiency calibrating of HPGe detector coupled with Canberra GC3018 with Genie 2000 software and Ortec GEM25-76-XLB-C with Gamma Vision software; available at Neutron activation analysis laboratory in Malaysian Nuclear Agency (NM). The efficiency calibration curve was constructed from measurement of an IAEA, standard gamma point sources set composed by 214 Am, 57 Co, 133 Ba, 152 Eu, 137 Cs and 60 Co. The efficiency calibrations were performed for three different geometries: 5, 10 and 15 cm distances from the end cap detector. The polynomial parameters functions were simulated through a computer program, MATLAB in order to find an accurate fit to the experimental data points. The efficiency equation was established from the known fitted parameters which allow for the efficiency evaluation at particular energy of interest. The study shows that significant deviations in the efficiency, depending on the source-detector distance and photon energy. (author)

6. MATLAB-based program for optimization of quantum cascade laser active region parameters and calculation of output characteristics in magnetic field

Science.gov (United States)

Smiljanić, J.; Žeželj, M.; Milanović, V.; Radovanović, J.; Stanković, I.

2014-03-01

A strong magnetic field applied along the growth direction of a quantum cascade laser (QCL) active region gives rise to a spectrum of discrete energy states, the Landau levels. By combining quantum engineering of a QCL with a static magnetic field, we can selectively inhibit/enhance non-radiative electron relaxation process between the relevant Landau levels of a triple quantum well and realize a tunable surface emitting device. An efficient numerical algorithm implementation is presented of optimization of GaAs/AlGaAs QCL region parameters and calculation of output properties in the magnetic field. Both theoretical analysis and MATLAB implementation are given for LO-phonon and interface roughness scattering mechanisms on the operation of QCL. At elevated temperatures, electrons in the relevant laser states absorb/emit more LO-phonons which results in reduction of the optical gain. The decrease in the optical gain is moderated by the occurrence of interface roughness scattering, which remains unchanged with increasing temperature. Using the calculated scattering rates as input data, rate equations can be solved and population inversion and the optical gain obtained. Incorporation of the interface roughness scattering mechanism into the model did not create new resonant peaks of the optical gain. However, it resulted in shifting the existing peaks positions and overall reduction of the optical gain. Catalogue identifier: AERL_v1_0 Program summary URL:http://cpc.cs.qub.ac.uk/summaries/AERL_v1_0.html Program obtainable from: CPC Program Library, Queen’s University, Belfast, N. Ireland Licensing provisions: Standard CPC licence, http://cpc.cs.qub.ac.uk/licence/licence.html No. of lines in distributed program, including test data, etc.: 37763 No. of bytes in distributed program, including test data, etc.: 2757956 Distribution format: tar.gz Programming language: MATLAB. Computer: Any capable of running MATLAB version R2010a or higher. Operating system: Any platform

7. SOLUTION OF THE PROBLEM OF INCREASING THE CAPACITY OF POWER SYSTEM BY USING THE MATLAB MODELING

International Nuclear Information System (INIS)

2008-01-01

A mathematical model of power system was constructed. It included eight types of electric power plants essential for covering a deficit and bringing the generating capacities of the power system to the level which would provide its normal operation. The restrictions were stated in terms of inequalities, the efficiency function was chosen and the corresponding problem was solved by using the Matlab system. The obtained values of variables represented the values of generated capacities of appropriate power plants providing the minimum value of the efficiency function. (author)

8. A MATLAB Script for Solving 2D/3D Minimum Compliance Problems using Anisotropic Mesh Adaptation

DEFF Research Database (Denmark)

Jensen, Kristian Ejlebjerg

2017-01-01

We present a pure MATLAB implementation for solving 2D/3D compliance minimization problems using the density method. A filtered design variable with a minimum length is computed using a Helmholtz-type differential equation. The optimality criteria is used as optimizer and to avoid local minima we...... apply continuation of an exponent that controls the stiffness associated with intermediate design variables. We constrain the volume from above and use the implementation to show that optimizations with dynamic meshes can save significant amounts of computational time compared to fixed meshes without...

9. Matlab Software for Spatial Panels

NARCIS (Netherlands)

Elhorst, J.Paul

2014-01-01

Elhorst provides Matlab routines to estimate spatial panel data models at his website. This article extends these routines to include the bias correction procedure proposed by Lee and Yu if the spatial panel data model contains spatial and/or time-period fixed effects, the direct and indirect

10. A Matlab program for stepwise regression

Directory of Open Access Journals (Sweden)

Yanhong Qi

2016-03-01

Full Text Available The stepwise linear regression is a multi-variable regression for identifying statistically significant variables in the linear regression equation. In present study, we presented the Matlab program of stepwise regression.

11. Matlab Tools: An Alternative to Planning Systems in Brachytherapy Treatments

International Nuclear Information System (INIS)

Herrera, Higmar; Rodriguez, Mercedes; Rodriguez, Miguel

2006-01-01

This work proposes the use of the Matlab environment to obtain the treatment dose based on the reported data by Krishnaswamy and Liu et al. The comparison with reported measurements is showed for the Amersham source model. For the 3M source model, measurements with TLDs and a Monte Carlo simulation are compared to the data obtained by Matlab. The difference for the Amersham model is well under the 15% recommended by the IAEA and for the 3M model, although the difference is greater, the results are consistent. The good agreement to the reported data allows the Matlab calculations to be used in daily brachytherapy treatments

12. Matlab Source Code for Species Transport through Nafion Membranes in Direct Ethanol, Direct Methanol, and Direct Glucose Fuel Cells

OpenAIRE

JH, Summerfield; MW, Manley

2016-01-01

A simple simulation of chemical species movement is presented. The species traverse a Nafion membrane in a fuel cell. Three cells are examined: direct methanol, direct ethanol, and direct glucose. The species are tracked using excess proton concentration, electric field strength, and voltage. The Matlab computer code is provided.

13. A Matlab/Simulink-Based Interactive Module for Servo Systems Learning

Science.gov (United States)

Aliane, N.

2010-01-01

This paper presents an interactive module for learning both the fundamental and practical issues of servo systems. This module, developed using Simulink in conjunction with the Matlab graphical user interface (Matlab-GUI) tool, is used to supplement conventional lectures in control engineering and robotics subjects. First, the paper introduces the…

14. A computationally efficient approach for template matching-based ...

In this paper, a new computationally efficient image registration method is ...... the proposed method requires less computational time as compared to traditional methods. ... Zitová B and Flusser J 2003 Image registration methods: A survey.

15. Instruction of pattern recognition by MATLAB practice 1

International Nuclear Information System (INIS)

1999-06-01

This book describes the pattern recognition by MATLAB practice. It includes possibility and limit of AI, introduction of pattern recognition a vector and matrix, basic status and a probability theory, a random variable and probability distribution, statistical decision theory, data-mining, gaussian mixture model, a nerve cell modeling such as Hebb's learning rule, LMS learning rule, genetic algorithm, dynamic programming and DTW, HMN on Markov model and HMM's three problems and solution, introduction of SVM with KKT condition and margin optimum, kernel trick and MATLAB practice.

16. Sampling and sensitivity analyses tools (SaSAT for computational modelling

Directory of Open Access Journals (Sweden)

Wilson David P

2008-02-01

Full Text Available Abstract SaSAT (Sampling and Sensitivity Analysis Tools is a user-friendly software package for applying uncertainty and sensitivity analyses to mathematical and computational models of arbitrary complexity and context. The toolbox is built in Matlab®, a numerical mathematical software package, and utilises algorithms contained in the Matlab® Statistics Toolbox. However, Matlab® is not required to use SaSAT as the software package is provided as an executable file with all the necessary supplementary files. The SaSAT package is also designed to work seamlessly with Microsoft Excel but no functionality is forfeited if that software is not available. A comprehensive suite of tools is provided to enable the following tasks to be easily performed: efficient and equitable sampling of parameter space by various methodologies; calculation of correlation coefficients; regression analysis; factor prioritisation; and graphical output of results, including response surfaces, tornado plots, and scatterplots. Use of SaSAT is exemplified by application to a simple epidemic model. To our knowledge, a number of the methods available in SaSAT for performing sensitivity analyses have not previously been used in epidemiological modelling and their usefulness in this context is demonstrated.

17. Convolutional networks for fast, energy-efficient neuromorphic computing.

Science.gov (United States)

Esser, Steven K; Merolla, Paul A; Arthur, John V; Cassidy, Andrew S; Appuswamy, Rathinakumar; Andreopoulos, Alexander; Berg, David J; McKinstry, Jeffrey L; Melano, Timothy; Barch, Davis R; di Nolfo, Carmelo; Datta, Pallab; Amir, Arnon; Taba, Brian; Flickner, Myron D; Modha, Dharmendra S

2016-10-11

Deep networks are now able to achieve human-level performance on a broad spectrum of recognition tasks. Independently, neuromorphic computing has now demonstrated unprecedented energy-efficiency through a new chip architecture based on spiking neurons, low precision synapses, and a scalable communication network. Here, we demonstrate that neuromorphic computing, despite its novel architectural primitives, can implement deep convolution networks that (i) approach state-of-the-art classification accuracy across eight standard datasets encompassing vision and speech, (ii) perform inference while preserving the hardware's underlying energy-efficiency and high throughput, running on the aforementioned datasets at between 1,200 and 2,600 frames/s and using between 25 and 275 mW (effectively >6,000 frames/s per Watt), and (iii) can be specified and trained using backpropagation with the same ease-of-use as contemporary deep learning. This approach allows the algorithmic power of deep learning to be merged with the efficiency of neuromorphic processors, bringing the promise of embedded, intelligent, brain-inspired computing one step closer.

18. Edge detection and mathematic fitting for corneal surface with Matlab software.

Science.gov (United States)

Di, Yue; Li, Mei-Yan; Qiao, Tong; Lu, Na

2017-01-01

To select the optimal edge detection methods to identify the corneal surface, and compare three fitting curve equations with Matlab software. Fifteen subjects were recruited. The corneal images from optical coherence tomography (OCT) were imported into Matlab software. Five edge detection methods (Canny, Log, Prewitt, Roberts, Sobel) were used to identify the corneal surface. Then two manual identifying methods (ginput and getpts) were applied to identify the edge coordinates respectively. The differences among these methods were compared. Binomial curve (y=Ax 2 +Bx+C), Polynomial curve [p(x)=p1x n +p2x n-1 +....+pnx+pn+1] and Conic section (Ax 2 +Bxy+Cy 2 +Dx+Ey+F=0) were used for curve fitting the corneal surface respectively. The relative merits among three fitting curves were analyzed. Finally, the eccentricity (e) obtained by corneal topography and conic section were compared with paired t -test. Five edge detection algorithms all had continuous coordinates which indicated the edge of the corneal surface. The ordinates of manual identifying were close to the inside of the actual edges. Binomial curve was greatly affected by tilt angle. Polynomial curve was lack of geometrical properties and unstable. Conic section could calculate the tilted symmetry axis, eccentricity, circle center, etc . There were no significant differences between 'e' values by corneal topography and conic section ( t =0.9143, P =0.3760 >0.05). It is feasible to simulate the corneal surface with mathematical curve with Matlab software. Edge detection has better repeatability and higher efficiency. The manual identifying approach is an indispensable complement for detection. Polynomial and conic section are both the alternative methods for corneal curve fitting. Conic curve was the optimal choice based on the specific geometrical properties.

19. MATLAB/SIMULINK platform for simulation of CANDU reactor control system

International Nuclear Information System (INIS)

Javidnia, H.; Jiang, J.

2007-01-01

In this paper a simulation platform for CANDU reactors' control system is presented. The platform is built on MATLAB/SIMULINK interactive graphical interface. Since MATLAB/SIMULINK are powerful tools to describe systems mathematically, all the subsystems in a CANDU reactor are represented in MATLAB's language and are implemented in SIMULINK graphical representation. The focus of the paper is on the flux control loop of CANDU reactors. However, the ideas can be extended to include other parts in CANDU power plants and the same technique can be applied to other types of nuclear reactors and their control systems. The CANDU reactor model and xenon feedback model are also discussed in this paper. (author)

20. Construction of multi-functional open modulized Matlab simulation toolbox for imaging ladar system

Science.gov (United States)

Wu, Long; Zhao, Yuan; Tang, Meng; He, Jiang; Zhang, Yong

2011-06-01

Ladar system simulation is to simulate the ladar models using computer simulation technology in order to predict the performance of the ladar system. This paper presents the developments of laser imaging radar simulation for domestic and overseas studies and the studies of computer simulation on ladar system with different application requests. The LadarSim and FOI-LadarSIM simulation facilities of Utah State University and Swedish Defence Research Agency are introduced in details. This paper presents the low level of simulation scale, un-unified design and applications of domestic researches in imaging ladar system simulation, which are mostly to achieve simple function simulation based on ranging equations for ladar systems. Design of laser imaging radar simulation with open and modularized structure is proposed to design unified modules for ladar system, laser emitter, atmosphere models, target models, signal receiver, parameters setting and system controller. Unified Matlab toolbox and standard control modules have been built with regulated input and output of the functions, and the communication protocols between hardware modules. A simulation based on ICCD gain-modulated imaging ladar system for a space shuttle is made based on the toolbox. The simulation result shows that the models and parameter settings of the Matlab toolbox are able to simulate the actual detection process precisely. The unified control module and pre-defined parameter settings simplify the simulation of imaging ladar detection. Its open structures enable the toolbox to be modified for specialized requests. The modulization gives simulations flexibility.

1. MATLAB Toolboxes for Reference Electrode Standardization Technique (REST) of Scalp EEG.

Science.gov (United States)

Dong, Li; Li, Fali; Liu, Qiang; Wen, Xin; Lai, Yongxiu; Xu, Peng; Yao, Dezhong

2017-01-01

Reference electrode standardization technique (REST) has been increasingly acknowledged and applied as a re-reference technique to transform an actual multi-channels recordings to approximately zero reference ones in electroencephalography/event-related potentials (EEG/ERPs) community around the world in recent years. However, a more easy-to-use toolbox for re-referencing scalp EEG data to zero reference is still lacking. Here, we have therefore developed two open-source MATLAB toolboxes for REST of scalp EEG. One version of REST is closely integrated into EEGLAB, which is a popular MATLAB toolbox for processing the EEG data; and another is a batch version to make it more convenient and efficient for experienced users. Both of them are designed to provide an easy-to-use for novice researchers and flexibility for experienced researchers. All versions of the REST toolboxes can be freely downloaded at http://www.neuro.uestc.edu.cn/rest/Down.html, and the detailed information including publications, comments and documents on REST can also be found from this website. An example of usage is given with comparative results of REST and average reference. We hope these user-friendly REST toolboxes could make the relatively novel technique of REST easier to study, especially for applications in various EEG studies.

2. Scilab and MATLAB Interfaces to MUMPS (version 4.6 or greater)

OpenAIRE

Fèvre , Aurélia; Pralet , Stéphane; L'Excellent , Jean-Yves

2006-01-01

This document describes the Scilab and MATLAB interfaces to MUMPS version 4.6. We describe the differences and similarities between usual Fortran/C MUMPS interfaces and its Scilab/MATLAB interfaces, the calling sequences and functionalities. Examples of use and experimental results are also provided.

3. Development of MATLAB Scripts for the Calculation of Thermal Manikin Regional Resistance Values

Science.gov (United States)

2016-01-01

TECHNICAL NOTE NO. TN16-1 DATE January 2016 ADA DEVELOPMENT OF MATLAB ® SCRIPTS FOR THE...USARIEM TECHNICAL NOTE TN16-1 DEVELOPMENT OF MATLAB ® SCRIPTS FOR THE CALCULATION OF THERMAL MANIKIN REGIONAL RESISTANCE VALUES...EXECUTIVE SUMMARY A software tool has been developed via MATLAB ® scripts to reduce the amount of repetitive and time-consuming calculations that are

4. [Landmark-based automatic registration of serial cross-sectional images of Chinese digital human using Photoshop and Matlab software].

Science.gov (United States)

Su, Xiu-yun; Pei, Guo-xian; Yu, Bin; Hu, Yan-ling; Li, Jin; Huang, Qian; Li, Xu; Zhang, Yuan-zhi

2007-12-01

This paper describes automatic registration of the serial cross-sectional images of Chinese digital human by projective registration method based on the landmarks using the commercially available software Photoshop and Matlab. During cadaver embedment for acquisition of the Chinese digital human images, 4 rods were placed parallel to the vertical axis of the frozen cadaver to allow orientation. Projective distortion of the rod positions on the cross-sectional images was inevitable due to even slight changes of the relative position of the camera. The original cross-sectional images were first processed using Photoshop software firstly to obtain the images of the orientation rods, and the centroid coordinate of every rod image was acquired with Matlab software. With the average coordinate value of the rods as the fiducial point, two-dimensional projective transformation coefficient of each image was determined. Projective transformation was then carried out and projective distortion from each original serial image was eliminated. The rectified cross-sectional images were again processed using Photoshop to obtain the image of the first orientation rod, the coordinate value of first rod image was calculated using Matlab software, and the cross-sectional images were cut into images of the same size according to the first rod spatial coordinate, to achieve automatic registration of the serial cross-sectional images. sing Photoshop and Matlab softwares, projective transformation can accurately accomplish the image registration for the serial images with simpler calculation processes and easier computer processing.

5. Study of a photovoltaic system with MPPT using Matlab

Directory of Open Access Journals (Sweden)

Dumitru Pop

2012-12-01

Full Text Available In this paper a photovoltaic (PV system is analyzed using Matlab. First, a Matlab code is written in order to obtain the I-V and P-V curves at different values of solar irradiation and cell temperature. The results were compared with the experimental data of a commercial PV module, USP 150. Then, the code was implemented in Simulink and, along with a MPPT algorithm and a DC-DC converter, the whole system was simulated.

6. The Julia programming language: the future of scientific computing

Science.gov (United States)

Gibson, John

2017-11-01

Julia is an innovative new open-source programming language for high-level, high-performance numerical computing. Julia combines the general-purpose breadth and extensibility of Python, the ease-of-use and numeric focus of Matlab, the speed of C and Fortran, and the metaprogramming power of Lisp. Julia uses type inference and just-in-time compilation to compile high-level user code to machine code on the fly. A rich set of numeric types and extensive numerical libraries are built-in. As a result, Julia is competitive with Matlab for interactive graphical exploration and with C and Fortran for high-performance computing. This talk interactively demonstrates Julia's numerical features and benchmarks Julia against C, C++, Fortran, Matlab, and Python on a spectral time-stepping algorithm for a 1d nonlinear partial differential equation. The Julia code is nearly as compact as Matlab and nearly as fast as Fortran. This material is based upon work supported by the National Science Foundation under Grant No. 1554149.

7. Digital simulation of FM-ZCS-quasi resonant converter fed DD servo drive using Matlab Simulink

Directory of Open Access Journals (Sweden)

Kattamuri Narasimha Rao

2009-01-01

Full Text Available This paper deals with digital simulation of FM-ZCS-quasi resonant converter fed DC servo drive using Matlab Simulink. Quasi Resonant Converter (QRC is fast replacing conventional PWM converters in high frequency operation. The salient feature of QRC is that the switching devices can be either switched on at zero voltage or switched off at zero current, so that switching losses are zero ideally. Switching stresses are low, volumes are low and power density is high. This property imparts high efficiency and high power density to the converters. The output of QRC is regulated by varying the switching frequency of the converter. Hence it is called Frequency modulated Zero current/zero voltage switching quasi resonant converter. The present work deals with simulation of DC Servo motor fed from ZCS-QRC using Matlab. Simulation results show that the ZCS-QRC's have low total harmonic distortion. The ZCS-QRC operating in half wave and full wave modes are simulated successfully. .

8. Energy efficiency of computer power supply units - Final report

Energy Technology Data Exchange (ETDEWEB)

Aebischer, B. [cepe - Centre for Energy Policy and Economics, Swiss Federal Institute of Technology Zuerich, Zuerich (Switzerland); Huser, H. [Encontrol GmbH, Niederrohrdorf (Switzerland)

2002-11-15

This final report for the Swiss Federal Office of Energy (SFOE) takes a look at the efficiency of computer power supply units, which decreases rapidly during average computer use. The background and the purpose of the project are examined. The power supplies for personal computers are discussed and the testing arrangement used is described. Efficiency, power-factor and operating points of the units are examined. Potentials for improvement and measures to be taken are discussed. Also, action to be taken by those involved in the design and operation of such power units is proposed. Finally, recommendations for further work are made.

9. Automated processing of thermal infrared images of Osservatorio Vesuviano permanent surveillance network by using Matlab code

Science.gov (United States)

Sansivero, Fabio; Vilardo, Giuseppe; Caputo, Teresa

2017-04-01

The permanent thermal infrared surveillance network of Osservatorio Vesuviano (INGV) is composed of 6 stations which acquire IR frames of fumarole fields in the Campi Flegrei caldera and inside the Vesuvius crater (Italy). The IR frames are uploaded to a dedicated server in the Surveillance Center of Osservatorio Vesuviano in order to process the infrared data and to excerpt all the information contained. In a first phase the infrared data are processed by an automated system (A.S.I.R.A. Acq- Automated System of IR Analysis and Acquisition) developed in Matlab environment and with a user-friendly graphic user interface (GUI). ASIRA daily generates time-series of residual temperature values of the maximum temperatures observed in the IR scenes after the removal of seasonal effects. These time-series are displayed in the Surveillance Room of Osservatorio Vesuviano and provide information about the evolution of shallow temperatures field of the observed areas. In particular the features of ASIRA Acq include: a) efficient quality selection of IR scenes, b) IR images co-registration in respect of a reference frame, c) seasonal correction by using a background-removal methodology, a) filing of IR matrices and of the processed data in shared archives accessible to interrogation. The daily archived records can be also processed by ASIRA Plot (Matlab code with GUI) to visualize IR data time-series and to help in evaluating inputs parameters for further data processing and analysis. Additional processing features are accomplished in a second phase by ASIRA Tools which is Matlab code with GUI developed to extract further information from the dataset in automated way. The main functions of ASIRA Tools are: a) the analysis of temperature variations of each pixel of the IR frame in a given time interval, b) the removal of seasonal effects from temperature of every pixel in the IR frames by using an analytic approach (removal of sinusoidal long term seasonal component by using a

10. How to Interface Fortran with Matlab

OpenAIRE

Sagastizábal , Claudia; Vige , Guillaume

1995-01-01

Projet PROMATH; We describe the general procedure for interfacing Fortran routines with Matlab. We explain how to write a mex-file and the associated gateway function. In particular, each different type of argument is considered in detail. We finish with an illustrative example

11. Convolutional networks for fast, energy-efficient neuromorphic computing

Science.gov (United States)

Esser, Steven K.; Merolla, Paul A.; Arthur, John V.; Cassidy, Andrew S.; Appuswamy, Rathinakumar; Andreopoulos, Alexander; Berg, David J.; McKinstry, Jeffrey L.; Melano, Timothy; Barch, Davis R.; di Nolfo, Carmelo; Datta, Pallab; Amir, Arnon; Taba, Brian; Flickner, Myron D.; Modha, Dharmendra S.

2016-01-01

Deep networks are now able to achieve human-level performance on a broad spectrum of recognition tasks. Independently, neuromorphic computing has now demonstrated unprecedented energy-efficiency through a new chip architecture based on spiking neurons, low precision synapses, and a scalable communication network. Here, we demonstrate that neuromorphic computing, despite its novel architectural primitives, can implement deep convolution networks that (i) approach state-of-the-art classification accuracy across eight standard datasets encompassing vision and speech, (ii) perform inference while preserving the hardware’s underlying energy-efficiency and high throughput, running on the aforementioned datasets at between 1,200 and 2,600 frames/s and using between 25 and 275 mW (effectively >6,000 frames/s per Watt), and (iii) can be specified and trained using backpropagation with the same ease-of-use as contemporary deep learning. This approach allows the algorithmic power of deep learning to be merged with the efficiency of neuromorphic processors, bringing the promise of embedded, intelligent, brain-inspired computing one step closer. PMID:27651489

12. Computer Architecture Techniques for Power-Efficiency

CERN Document Server

Kaxiras, Stefanos

2008-01-01

In the last few years, power dissipation has become an important design constraint, on par with performance, in the design of new computer systems. Whereas in the past, the primary job of the computer architect was to translate improvements in operating frequency and transistor count into performance, now power efficiency must be taken into account at every step of the design process. While for some time, architects have been successful in delivering 40% to 50% annual improvement in processor performance, costs that were previously brushed aside eventually caught up. The most critical of these

13. Orthogonal transformations for change detection, Matlab code (ENVI-like headers)

DEFF Research Database (Denmark)

2007-01-01

Matlab code to do (iteratively reweighted) multivariate alteration detection (MAD) analysis, maximum autocorrelation factor (MAF) analysis, canonical correlation analysis (CCA) and principal component analysis (PCA) on image data; accommodates ENVI (like) header files.......Matlab code to do (iteratively reweighted) multivariate alteration detection (MAD) analysis, maximum autocorrelation factor (MAF) analysis, canonical correlation analysis (CCA) and principal component analysis (PCA) on image data; accommodates ENVI (like) header files....

14. ABAQUS2MATLAB: A Novel Tool for Finite Element Post-Processing

DEFF Research Database (Denmark)

Martínez Pañeda, Emilio; Papazafeiropoulos, George; Muniz-Calvente, Miguel

2017-01-01

A novel piece of software is presented to connect Abaqus, a sophisticated finite element package, with Matlab, the most comprehensive program for mathematical analysis. This interface between these well-known codes not only benefits from the image processing and the integrated graph-plotting feat......A novel piece of software is presented to connect Abaqus, a sophisticated finite element package, with Matlab, the most comprehensive program for mathematical analysis. This interface between these well-known codes not only benefits from the image processing and the integrated graph...... to demonstrate its capabilities. The source code, detailed documentation and a large number of tutorials can be freely downloaded from www.abaqus2matlab.com....

15. Numerical linear algebra a concise introduction with Matlab and Julia

CERN Document Server

Bornemann, Folkmar

2018-01-01

This book offers an introduction to the algorithmic-numerical thinking using basic problems of linear algebra. By focusing on linear algebra, it ensures a stronger thematic coherence than is otherwise found in introductory lectures on numerics. The book highlights the usefulness of matrix partitioning compared to a component view, leading not only to a clearer notation and shorter algorithms, but also to significant runtime gains in modern computer architectures. The algorithms and accompanying numerical examples are given in the programming environment MATLAB, and additionally – in an appendix – in the future-oriented, freely accessible programming language Julia. This book is suitable for a two-hour lecture on numerical linear algebra from the second semester of a bachelor's degree in mathematics.

16. Nonlinear Boltzmann equation for the homogeneous isotropic case: Minimal deterministic Matlab program

Science.gov (United States)

Asinari, Pietro

2010-10-01

.gz Programming language: Tested with Matlab version ⩽6.5. However, in principle, any recent version of Matlab or Octave should work Computer: All supporting Matlab or Octave Operating system: All supporting Matlab or Octave RAM: 300 MBytes Classification: 23 Nature of problem: The problem consists in integrating the homogeneous Boltzmann equation for a generic collisional kernel in case of isotropic symmetry, by a deterministic direct method. Difficulties arise from the multi-dimensionality of the collisional operator and from satisfying the conservation of particle number and energy (momentum is trivial for this test case) as accurately as possible, in order to preserve the late dynamics. Solution method: The solution is based on the method proposed by Aristov (2001) [1], but with two substantial improvements: (a) the original problem is reformulated in terms of particle kinetic energy (this allows one to ensure exact particle number and energy conservation during microscopic collisions) and (b) a DVM-like correction (where DVM stands for Discrete Velocity Model) is adopted for improving the relaxation rates (this allows one to satisfy exactly the conservation laws at macroscopic level, which is particularly important for describing the late dynamics in the relaxation towards the equilibrium). Both these corrections make possible to derive very accurate reference solutions for this test case. Restrictions: The nonlinear Boltzmann equation is extremely challenging from the computational point of view, in particular for deterministic methods, despite the increased computational power of recent hardware. In this work, only the homogeneous isotropic case is considered, for making possible the development of a minimal program (by a simple scripting language) and allowing the user to check the advantages of the proposed improvements beyond Aristov's (2001) method [1]. The initial conditions are supposed parameterized according to a fixed analytical expression, but this can be

17. Memory-Efficient Analysis of Dense Functional Connectomes.

Science.gov (United States)

Loewe, Kristian; Donohue, Sarah E; Schoenfeld, Mircea A; Kruse, Rudolf; Borgelt, Christian

2016-01-01

The functioning of the human brain relies on the interplay and integration of numerous individual units within a complex network. To identify network configurations characteristic of specific cognitive tasks or mental illnesses, functional connectomes can be constructed based on the assessment of synchronous fMRI activity at separate brain sites, and then analyzed using graph-theoretical concepts. In most previous studies, relatively coarse parcellations of the brain were used to define regions as graphical nodes. Such parcellated connectomes are highly dependent on parcellation quality because regional and functional boundaries need to be relatively consistent for the results to be interpretable. In contrast, dense connectomes are not subject to this limitation, since the parcellation inherent to the data is used to define graphical nodes, also allowing for a more detailed spatial mapping of connectivity patterns. However, dense connectomes are associated with considerable computational demands in terms of both time and memory requirements. The memory required to explicitly store dense connectomes in main memory can render their analysis infeasible, especially when considering high-resolution data or analyses across multiple subjects or conditions. Here, we present an object-based matrix representation that achieves a very low memory footprint by computing matrix elements on demand instead of explicitly storing them. In doing so, memory required for a dense connectome is reduced to the amount needed to store the underlying time series data. Based on theoretical considerations and benchmarks, different matrix object implementations and additional programs (based on available Matlab functions and Matlab-based third-party software) are compared with regard to their computational efficiency. The matrix implementation based on on-demand computations has very low memory requirements, thus enabling analyses that would be otherwise infeasible to conduct due to

18. Computing with memory for energy-efficient robust systems

CERN Document Server

Paul, Somnath

2013-01-01

This book analyzes energy and reliability as major challenges faced by designers of computing frameworks in the nanometer technology regime.  The authors describe the existing solutions to address these challenges and then reveal a new reconfigurable computing platform, which leverages high-density nanoscale memory for both data storage and computation to maximize the energy-efficiency and reliability. The energy and reliability benefits of this new paradigm are illustrated and the design challenges are discussed. Various hardware and software aspects of this exciting computing paradigm are de

19. Updates to FuncLab, a Matlab based GUI for handling receiver functions

Science.gov (United States)

Porritt, Robert W.; Miller, Meghan S.

2018-02-01

Receiver functions are a versatile tool commonly used in seismic imaging. Depending on how they are processed, they can be used to image discontinuity structure within the crust or mantle or they can be inverted for seismic velocity either directly or jointly with complementary datasets. However, modern studies generally require large datasets which can be challenging to handle; therefore, FuncLab was originally written as an interactive Matlab GUI to assist in handling these large datasets. This software uses a project database to allow interactive trace editing, data visualization, H-κ stacking for crustal thickness and Vp/Vs ratio, and common conversion point stacking while minimizing computational costs. Since its initial release, significant advances have been made in the implementation of web services and changes in the underlying Matlab platform have necessitated a significant revision to the software. Here, we present revisions to the software, including new features such as data downloading via irisFetch.m, receiver function calculations via processRFmatlab, on-the-fly cross-section tools, interface picking, and more. In the descriptions of the tools, we present its application to a test dataset in Michigan, Wisconsin, and neighboring areas following the passage of USArray Transportable Array. The software is made available online at https://robporritt.wordpress.com/software.

20. Digital signal processing with Matlab examples

CERN Document Server

Giron-Sierra, Jose Maria

2017-01-01

This is the first volume in a trilogy on modern Signal Processing. The three books provide a concise exposition of signal processing topics, and a guide to support individual practical exploration based on MATLAB programs. This book includes MATLAB codes to illustrate each of the main steps of the theory, offering a self-contained guide suitable for independent study. The code is embedded in the text, helping readers to put into practice the ideas and methods discussed. The book is divided into three parts, the first of which introduces readers to periodic and non-periodic signals. The second part is devoted to filtering, which is an important and commonly used application. The third part addresses more advanced topics, including the analysis of real-world non-stationary signals and data, e.g. structural fatigue, earthquakes, electro-encephalograms, birdsong, etc. The book’s last chapter focuses on modulation, an example of the intentional use of non-stationary signals.

1. SPIDYAN, a MATLAB library for simulating pulse EPR experiments with arbitrary waveform excitation.

Science.gov (United States)

Pribitzer, Stephan; Doll, Andrin; Jeschke, Gunnar

2016-02-01

Frequency-swept chirp pulses, created with arbitrary waveform generators (AWGs), can achieve inversion over a range of several hundreds of MHz. Such passage pulses provide defined flip angles and increase sensitivity. The fact that spectra are not excited at once, but single transitions are passed one after another, can cause new effects in established pulse EPR sequences. We developed a MATLAB library for simulation of pulse EPR, which is especially suited for modeling spin dynamics in ultra-wideband (UWB) EPR experiments, but can also be used for other experiments and NMR. At present the command line controlled SPin DYnamics ANalysis (SPIDYAN) package supports one-spin and two-spin systems with arbitrary spin quantum numbers. By providing the program with appropriate spin operators and Hamiltonian matrices any spin system is accessible, with limits set only by available memory and computation time. Any pulse sequence using rectangular and linearly or variable-rate frequency-swept chirp pulses, including phase cycling can be quickly created. To keep track of spin evolution the user can choose from a vast variety of detection operators, including transition selective operators. If relaxation effects can be neglected, the program solves the Liouville-von Neumann equation and propagates spin density matrices. In the other cases SPIDYAN uses the quantum mechanical master equation and Liouvillians for propagation. In order to consider the resonator response function, which on the scale of UWB excitation limits bandwidth, the program includes a simple RLC circuit model. Another subroutine can compute waveforms that, for a given resonator, maintain a constant critical adiabaticity factor over the excitation band. Computational efficiency is enhanced by precomputing propagator lookup tables for the whole set of AWG output levels. The features of the software library are discussed and demonstrated with spin-echo and population transfer simulations. Copyright © 2016

2. Efficient simulation of intrinsic, extrinsic and external noise in biochemical systems

Science.gov (United States)

Pischel, Dennis; Sundmacher, Kai; Flassig, Robert J.

2017-01-01

Abstract Motivation: Biological cells operate in a noisy regime influenced by intrinsic, extrinsic and external noise, which leads to large differences of individual cell states. Stochastic effects must be taken into account to characterize biochemical kinetics accurately. Since the exact solution of the chemical master equation, which governs the underlying stochastic process, cannot be derived for most biochemical systems, approximate methods are used to obtain a solution. Results: In this study, a method to efficiently simulate the various sources of noise simultaneously is proposed and benchmarked on several examples. The method relies on the combination of the sigma point approach to describe extrinsic and external variability and the τ-leaping algorithm to account for the stochasticity due to probabilistic reactions. The comparison of our method to extensive Monte Carlo calculations demonstrates an immense computational advantage while losing an acceptable amount of accuracy. Additionally, the application to parameter optimization problems in stochastic biochemical reaction networks is shown, which is rarely applied due to its huge computational burden. To give further insight, a MATLAB script is provided including the proposed method applied to a simple toy example of gene expression. Availability and implementation: MATLAB code is available at Bioinformatics online. Contact: flassig@mpi-magdeburg.mpg.de Supplementary information: Supplementary data are available at Bioinformatics online. PMID:28881987

3. Automatic analysis (aa: efficient neuroimaging workflows and parallel processing using Matlab and XML

Directory of Open Access Journals (Sweden)

Rhodri eCusack

2015-01-01

Full Text Available Recent years have seen neuroimaging data becoming richer, with larger cohorts of participants, a greater variety of acquisition techniques, and increasingly complex analyses. These advances have made data analysis pipelines complex to set up and run (increasing the risk of human error and time consuming to execute (restricting what analyses are attempted. Here we present an open-source framework, automatic analysis (aa, to address these concerns. Human efficiency is increased by making code modular and reusable, and managing its execution with a processing engine that tracks what has been completed and what needs to be (redone. Analysis is accelerated by optional parallel processing of independent tasks on cluster or cloud computing resources. A pipeline comprises a series of modules that each perform a specific task. The processing engine keeps track of the data, calculating a map of upstream and downstream dependencies for each module. Existing modules are available for many analysis tasks, such as SPM-based fMRI preprocessing, individual and group level statistics, voxel-based morphometry, tractography, and multi-voxel pattern analyses (MVPA. However, aa also allows for full customization, and encourages efficient management of code: new modules may be written with only a small code overhead. aa has been used by more than 50 researchers in hundreds of neuroimaging studies comprising thousands of subjects. It has been found to be robust, fast and efficient, for simple single subject studies up to multimodal pipelines on hundreds of subjects. It is attractive to both novice and experienced users. aa can reduce the amount of time neuroimaging laboratories spend performing analyses and reduce errors, expanding the range of scientific questions it is practical to address.

4. Automatic analysis (aa): efficient neuroimaging workflows and parallel processing using Matlab and XML.

Science.gov (United States)

Cusack, Rhodri; Vicente-Grabovetsky, Alejandro; Mitchell, Daniel J; Wild, Conor J; Auer, Tibor; Linke, Annika C; Peelle, Jonathan E

2014-01-01

Recent years have seen neuroimaging data sets becoming richer, with larger cohorts of participants, a greater variety of acquisition techniques, and increasingly complex analyses. These advances have made data analysis pipelines complicated to set up and run (increasing the risk of human error) and time consuming to execute (restricting what analyses are attempted). Here we present an open-source framework, automatic analysis (aa), to address these concerns. Human efficiency is increased by making code modular and reusable, and managing its execution with a processing engine that tracks what has been completed and what needs to be (re)done. Analysis is accelerated by optional parallel processing of independent tasks on cluster or cloud computing resources. A pipeline comprises a series of modules that each perform a specific task. The processing engine keeps track of the data, calculating a map of upstream and downstream dependencies for each module. Existing modules are available for many analysis tasks, such as SPM-based fMRI preprocessing, individual and group level statistics, voxel-based morphometry, tractography, and multi-voxel pattern analyses (MVPA). However, aa also allows for full customization, and encourages efficient management of code: new modules may be written with only a small code overhead. aa has been used by more than 50 researchers in hundreds of neuroimaging studies comprising thousands of subjects. It has been found to be robust, fast, and efficient, for simple-single subject studies up to multimodal pipelines on hundreds of subjects. It is attractive to both novice and experienced users. aa can reduce the amount of time neuroimaging laboratories spend performing analyses and reduce errors, expanding the range of scientific questions it is practical to address.

5. Efficiency using computer simulation of Reverse Threshold Model Theory on assessing a “One Laptop Per Child” computer versus desktop computer

Directory of Open Access Journals (Sweden)

Supat Faarungsang

2017-04-01

Full Text Available The Reverse Threshold Model Theory (RTMT model was introduced based on limiting factor concepts, but its efficiency compared to the Conventional Model (CM has not been published. This investigation assessed the efficiency of RTMT compared to CM using computer simulation on the “One Laptop Per Child” computer and a desktop computer. Based on probability values, it was found that RTMT was more efficient than CM among eight treatment combinations and an earlier study verified that RTMT gives complete elimination of random error. Furthermore, RTMT has several advantages over CM and is therefore proposed to be applied to most research data.

6. MATLAB tensor classes for fast algorithm prototyping.

Energy Technology Data Exchange (ETDEWEB)

Bader, Brett William; Kolda, Tamara Gibson (Sandia National Laboratories, Livermore, CA)

2004-10-01

Tensors (also known as mutidimensional arrays or N-way arrays) are used in a variety of applications ranging from chemometrics to psychometrics. We describe four MATLAB classes for tensor manipulations that can be used for fast algorithm prototyping. The tensor class extends the functionality of MATLAB's multidimensional arrays by supporting additional operations such as tensor multiplication. The tensor as matrix class supports the 'matricization' of a tensor, i.e., the conversion of a tensor to a matrix (and vice versa), a commonly used operation in many algorithms. Two additional classes represent tensors stored in decomposed formats: cp tensor and tucker tensor. We descibe all of these classes and then demonstrate their use by showing how to implement several tensor algorithms that have appeared in the literature.

7. Abaqus2Matlab: A suitable tool for finite element post-processing

DEFF Research Database (Denmark)

Papazafeiropoulos, George; Muñiz-Calvente, Miguel; Martínez Pañeda, Emilio

2017-01-01

A suitable piece of software is presented to connect Abaqus, a sophisticated finite element package, with Matlab, the most comprehensive program for mathematical analysis. This interface between these well- known codes not only benefits from the image processing and the integrated graph-plotting ......A suitable piece of software is presented to connect Abaqus, a sophisticated finite element package, with Matlab, the most comprehensive program for mathematical analysis. This interface between these well- known codes not only benefits from the image processing and the integrated graph...... crack propagation in structural materials by means of a cohesive zone approach. The source code, detailed documentation and a large number of tutorials can be freely downloaded from www.abaqus2matlab.com ....

8. TORCH Computational Reference Kernels - A Testbed for Computer Science Research

Energy Technology Data Exchange (ETDEWEB)

Kaiser, Alex; Williams, Samuel Webb; Madduri, Kamesh; Ibrahim, Khaled; Bailey, David H.; Demmel, James W.; Strohmaier, Erich

2010-12-02

For decades, computer scientists have sought guidance on how to evolve architectures, languages, and programming models in order to improve application performance, efficiency, and productivity. Unfortunately, without overarching advice about future directions in these areas, individual guidance is inferred from the existing software/hardware ecosystem, and each discipline often conducts their research independently assuming all other technologies remain fixed. In today's rapidly evolving world of on-chip parallelism, isolated and iterative improvements to performance may miss superior solutions in the same way gradient descent optimization techniques may get stuck in local minima. To combat this, we present TORCH: A Testbed for Optimization ResearCH. These computational reference kernels define the core problems of interest in scientific computing without mandating a specific language, algorithm, programming model, or implementation. To compliment the kernel (problem) definitions, we provide a set of algorithmically-expressed verification tests that can be used to verify a hardware/software co-designed solution produces an acceptable answer. Finally, to provide some illumination as to how researchers have implemented solutions to these problems in the past, we provide a set of reference implementations in C and MATLAB.

9. Mathematical Formulation used by MATLAB Code to Convert FTIR Interferograms to Calibrated Spectra

Energy Technology Data Exchange (ETDEWEB)

Armstrong, Derek Elswick [Los Alamos National Lab. (LANL), Los Alamos, NM (United States)

2016-07-19

This report discusses the mathematical procedures used to convert raw interferograms from Fourier transform infrared (FTIR) sensors to calibrated spectra. The work discussed in this report was completed as part of the Helios project at Los Alamos National Laboratory. MATLAB code was developed to convert the raw interferograms to calibrated spectra. The report summarizes the developed MATLAB scripts and functions, along with a description of the mathematical methods used by the code. The first step in working with raw interferograms is to convert them to uncalibrated spectra by applying an apodization function to the raw data and then by performing a Fourier transform. The developed MATLAB code also addresses phase error correction by applying the Mertz method. This report provides documentation for the MATLAB scripts.

10. CAESY - COMPUTER AIDED ENGINEERING SYSTEM

Science.gov (United States)

Wette, M. R.

1994-01-01

Many developers of software and algorithms for control system design have recognized that current tools have limits in both flexibility and efficiency. Many forces drive the development of new tools including the desire to make complex system modeling design and analysis easier and the need for quicker turnaround time in analysis and design. Other considerations include the desire to make use of advanced computer architectures to help in control system design, adopt new methodologies in control, and integrate design processes (e.g., structure, control, optics). CAESY was developed to provide a means to evaluate methods for dealing with user needs in computer-aided control system design. It is an interpreter for performing engineering calculations and incorporates features of both Ada and MATLAB. It is designed to be reasonably flexible and powerful. CAESY includes internally defined functions and procedures, as well as user defined ones. Support for matrix calculations is provided in the same manner as MATLAB. However, the development of CAESY is a research project, and while it provides some features which are not found in commercially sold tools, it does not exhibit the robustness that many commercially developed tools provide. CAESY is written in C-language for use on Sun4 series computers running SunOS 4.1.1 and later. The program is designed to optionally use the LAPACK math library. The LAPACK math routines are available through anonymous ftp from research.att.com. CAESY requires 4Mb of RAM for execution. The standard distribution medium is a .25 inch streaming magnetic tape cartridge (QIC-24) in UNIX tar format. CAESY was developed in 1993 and is a copyrighted work with all copyright vested in NASA.

11. The Effect of Computer Automation on Institutional Review Board (IRB) Office Efficiency

Science.gov (United States)

Oder, Karl; Pittman, Stephanie

2015-01-01

Companies purchase computer systems to make their processes more efficient through automation. Some academic medical centers (AMC) have purchased computer systems for their institutional review boards (IRB) to increase efficiency and compliance with regulations. IRB computer systems are expensive to purchase, deploy, and maintain. An AMC should…

12. GPELab, a Matlab toolbox to solve Gross-Pitaevskii equations II: Dynamics and stochastic simulations

Science.gov (United States)

Antoine, Xavier; Duboscq, Romain

2015-08-01

GPELab is a free Matlab toolbox for modeling and numerically solving large classes of systems of Gross-Pitaevskii equations that arise in the physics of Bose-Einstein condensates. The aim of this second paper, which follows (Antoine and Duboscq, 2014), is to first present the various pseudospectral schemes available in GPELab for computing the deterministic and stochastic nonlinear dynamics of Gross-Pitaevskii equations (Antoine, et al., 2013). Next, the corresponding GPELab functions are explained in detail. Finally, some numerical examples are provided to show how the code works for the complex dynamics of BEC problems.

13. Matlab modeling of ITER CODAC

International Nuclear Information System (INIS)

Pangione, L.; Lister, J.B.

2008-01-01

The ITER CODAC (COntrol, Data Access and Communication) conceptual design resulted from 2 years of activity. One result was a proposed functional partitioning of CODAC into different CODAC Systems, each of them partitioned into other CODAC Systems. Considering the large size of this project, simple use of human language assisted by figures would certainly be ineffective in creating an unambiguous description of all interactions and all relations between these Systems. Moreover, the underlying design is resident in the mind of the designers, who must consider all possible situations that could happen to each system. There is therefore a need to model the whole of CODAC with a clear and preferably graphical method, which allows the designers to verify the correctness and the consistency of their project. The aim of this paper is to describe the work started on ITER CODAC modeling using Matlab/Simulink. The main feature of this tool is the possibility of having a simple, graphical, intuitive representation of a complex system and ultimately to run a numerical simulation of it. Using Matlab/Simulink, each CODAC System was represented in a graphical and intuitive form with its relations and interactions through the definition of a small number of simple rules. In a Simulink diagram, each system was represented as a 'black box', both containing, and connected to, a number of other systems. In this way it is possible to move vertically between systems on different levels, to show the relation of membership, or horizontally to analyse the information exchange between systems at the same level. This process can be iterated, starting from a global diagram, in which only CODAC appears with the Plant Systems and the external sites, and going deeper down to the mathematical model of each CODAC system. The Matlab/Simulink features for simulating the whole top diagram encourage us to develop the idea of completing the functionalities of all systems in order to finally have a full

14. Labbtex: Toolbox para generación de informes en LATEX para Matlab

Directory of Open Access Journals (Sweden)

José Luis Almazán Gárate

2012-10-01

Full Text Available En este artículo se presenta el software desarrollado por el Equipo H3lite dentro del Departamento de Ingeneniería Civil. Transportes de la Escuela de Ingenieros de Caminos, Canales y Puertos de la Universidad Politécnica de Madrid para la generación de informes enLATEX mediante el software Matlab® y la integración en sus rutinas, Labbtex.La librería Labbtex proporciona un marco ﬂexible para mezclar texto y código Matlab® para la generación automática de documentos. Un rchivo fuente simple contiene el texto de documentación y el código Matlab, al correr la aplicación se genera un documento final LATEX que contiene el texto, gráﬁcos y tablas indicados con el formato de un documento LATEX. El código Matlab genera un documento LATEX usando la sintaxis. Así, LATEX (para composición de texto de alta calidad y Matlab® (para cálculo matemático pueden usarse simultáneamente. Esto permite la generación de informes en tiempo real con un uso de recursos mínimo.

15. Computationally Efficient Clustering of Audio-Visual Meeting Data

Science.gov (United States)

Hung, Hayley; Friedland, Gerald; Yeo, Chuohao

This chapter presents novel computationally efficient algorithms to extract semantically meaningful acoustic and visual events related to each of the participants in a group discussion using the example of business meeting recordings. The recording setup involves relatively few audio-visual sensors, comprising a limited number of cameras and microphones. We first demonstrate computationally efficient algorithms that can identify who spoke and when, a problem in speech processing known as speaker diarization. We also extract visual activity features efficiently from MPEG4 video by taking advantage of the processing that was already done for video compression. Then, we present a method of associating the audio-visual data together so that the content of each participant can be managed individually. The methods presented in this article can be used as a principal component that enables many higher-level semantic analysis tasks needed in search, retrieval, and navigation.

16. On efficiency of fire simulation realization: parallelization with greater number of computational meshes

Science.gov (United States)

Valasek, Lukas; Glasa, Jan

2017-12-01

Current fire simulation systems are capable to utilize advantages of high-performance computer (HPC) platforms available and to model fires efficiently in parallel. In this paper, efficiency of a corridor fire simulation on a HPC computer cluster is discussed. The parallel MPI version of Fire Dynamics Simulator is used for testing efficiency of selected strategies of allocation of computational resources of the cluster using a greater number of computational cores. Simulation results indicate that if the number of cores used is not equal to a multiple of the total number of cluster node cores there are allocation strategies which provide more efficient calculations.

17. KEGGParser: parsing and editing KEGG pathway maps in Matlab.

Science.gov (United States)

Arakelyan, Arsen; Nersisyan, Lilit

2013-02-15

KEGG pathway database is a collection of manually drawn pathway maps accompanied with KGML format files intended for use in automatic analysis. KGML files, however, do not contain the required information for complete reproduction of all the events indicated in the static image of a pathway map. Several parsers and editors of KEGG pathways exist for processing KGML files. We introduce KEGGParser-a MATLAB based tool for KEGG pathway parsing, semiautomatic fixing, editing, visualization and analysis in MATLAB environment. It also works with Scilab. The source code is available at http://www.mathworks.com/matlabcentral/fileexchange/37561.

18. Kinematic simulation and analysis of robot based on MATLAB

Science.gov (United States)

Liao, Shuhua; Li, Jiong

2018-03-01

The history of industrial automation is characterized by quick update technology, however, without a doubt, the industrial robot is a kind of special equipment. With the help of MATLAB matrix and drawing capacity in the MATLAB environment each link coordinate system set up by using the d-h parameters method and equation of motion of the structure. Robotics, Toolbox programming Toolbox and GUIDE to the joint application is the analysis of inverse kinematics and path planning and simulation, preliminary solve the problem of college students the car mechanical arm positioning theory, so as to achieve the aim of reservation.

19. A Total Factor Productivity Toolbox for MATLAB

NARCIS (Netherlands)

B.M. Balk (Bert); J. Barbero (Javier); J.L. Zofío (José)

2018-01-01

textabstractTotal Factor Productivity Toolbox is a new package for MATLAB that includes functions to calculate the main Total Factor Productivity (TFP) indices and their decompositions, based on Shephard’s distance functions and using Data Envelopment Analysis (DEA) programming techniques. The

20. A computationally efficient fuzzy control s

Directory of Open Access Journals (Sweden)

2013-12-01

Full Text Available This paper develops a decentralized fuzzy control scheme for MIMO nonlinear second order systems with application to robot manipulators via a combination of genetic algorithms (GAs and fuzzy systems. The controller for each degree of freedom (DOF consists of a feedforward fuzzy torque computing system and a feedback fuzzy PD system. The feedforward fuzzy system is trained and optimized off-line using GAs, whereas not only the parameters but also the structure of the fuzzy system is optimized. The feedback fuzzy PD system, on the other hand, is used to keep the closed-loop stable. The rule base consists of only four rules per each DOF. Furthermore, the fuzzy feedback system is decentralized and simplified leading to a computationally efficient control scheme. The proposed control scheme has the following advantages: (1 it needs no exact dynamics of the system and the computation is time-saving because of the simple structure of the fuzzy systems and (2 the controller is robust against various parameters and payload uncertainties. The computational complexity of the proposed control scheme has been analyzed and compared with previous works. Computer simulations show that this controller is effective in achieving the control goals.

1. Memory-efficient analysis of dense functional connectomes

Directory of Open Access Journals (Sweden)

Kristian Loewe

2016-11-01

Full Text Available The functioning of the human brain relies on the interplay and integration of numerous individual units within a complex network. To identify network configurations characteristic of specific cognitive tasks or mental illnesses, functional connectomes can be constructed based on the assessment of synchronous fMRI activity at separate brain sites, and then analyzed using graph-theoretical concepts. In most previous studies, relatively coarse parcellations of the brain were used to define regions as graphical nodes. Such parcellated connectomes are highly dependent on parcellation quality because regional and functional boundaries need to be relatively consistent for the results to be interpretable. In contrast, dense connectomes are not subject to this limitation, since the parcellation inherent to the data is used to define graphical nodes, also allowing for a more detailed spatial mapping of connectivity patterns. However, dense connectomes are associated with considerable computational demands in terms of both time and memory requirements. The memory required to explicitly store dense connectomes in main memory can render their analysis infeasible, especially when considering high-resolution data or analyses across multiple subjects or conditions. Here, we present an object-based matrix representation that achieves a very low memory footprint by computing matrix elements on demand instead of explicitly storing them. In doing so, memory required for a dense connectome is reduced to the amount needed to store the underlying time series data. Based on theoretical considerations and benchmarks, different matrix object implementations and additional programs (based on available Matlab functions and Matlab-based third-party software are compared with regard to their computational efficiency in terms of memory requirements and computation time. The matrix implementation based on on-demand computations has very low memory requirements thus enabling

2. Optimization design of wind turbine drive train based on Matlab genetic algorithm toolbox

Science.gov (United States)

Li, R. N.; Liu, X.; Liu, S. J.

2013-12-01

In order to ensure the high efficiency of the whole flexible drive train of the front-end speed adjusting wind turbine, the working principle of the main part of the drive train is analyzed. As critical parameters, rotating speed ratios of three planetary gear trains are selected as the research subject. The mathematical model of the torque converter speed ratio is established based on these three critical variable quantity, and the effect of key parameters on the efficiency of hydraulic mechanical transmission is analyzed. Based on the torque balance and the energy balance, refer to hydraulic mechanical transmission characteristics, the transmission efficiency expression of the whole drive train is established. The fitness function and constraint functions are established respectively based on the drive train transmission efficiency and the torque converter rotating speed ratio range. And the optimization calculation is carried out by using MATLAB genetic algorithm toolbox. The optimization method and results provide an optimization program for exact match of wind turbine rotor, gearbox, hydraulic mechanical transmission, hydraulic torque converter and synchronous generator, ensure that the drive train work with a high efficiency, and give a reference for the selection of the torque converter and hydraulic mechanical transmission.

3. Optimization design of wind turbine drive train based on Matlab genetic algorithm toolbox

International Nuclear Information System (INIS)

Li, R N; Liu, X; Liu, S J

2013-01-01

In order to ensure the high efficiency of the whole flexible drive train of the front-end speed adjusting wind turbine, the working principle of the main part of the drive train is analyzed. As critical parameters, rotating speed ratios of three planetary gear trains are selected as the research subject. The mathematical model of the torque converter speed ratio is established based on these three critical variable quantity, and the effect of key parameters on the efficiency of hydraulic mechanical transmission is analyzed. Based on the torque balance and the energy balance, refer to hydraulic mechanical transmission characteristics, the transmission efficiency expression of the whole drive train is established. The fitness function and constraint functions are established respectively based on the drive train transmission efficiency and the torque converter rotating speed ratio range. And the optimization calculation is carried out by using MATLAB genetic algorithm toolbox. The optimization method and results provide an optimization program for exact match of wind turbine rotor, gearbox, hydraulic mechanical transmission, hydraulic torque converter and synchronous generator, ensure that the drive train work with a high efficiency, and give a reference for the selection of the torque converter and hydraulic mechanical transmission

4. Power-Efficient Computing: Experiences from the COSA Project

Directory of Open Access Journals (Sweden)

Daniele Cesini

2017-01-01

Full Text Available Energy consumption is today one of the most relevant issues in operating HPC systems for scientific applications. The use of unconventional computing systems is therefore of great interest for several scientific communities looking for a better tradeoff between time-to-solution and energy-to-solution. In this context, the performance assessment of processors with a high ratio of performance per watt is necessary to understand how to realize energy-efficient computing systems for scientific applications, using this class of processors. Computing On SOC Architecture (COSA is a three-year project (2015–2017 funded by the Scientific Commission V of the Italian Institute for Nuclear Physics (INFN, which aims to investigate the performance and the total cost of ownership offered by computing systems based on commodity low-power Systems on Chip (SoCs and high energy-efficient systems based on GP-GPUs. In this work, we present the results of the project analyzing the performance of several scientific applications on several GPU- and SoC-based systems. We also describe the methodology we have used to measure energy performance and the tools we have implemented to monitor the power drained by applications while running.

5. ELRIS2D: A MATLAB Package for the 2D Inversion of DC Resistivity/IP Data

OpenAIRE

Akca Irfan

2016-01-01

ELRIS2D is an open source code written in MATLAB for the two-dimensional inversion of direct current resistivity (DCR) and time domain induced polarization (IP) data. The user interface of the program is designed for functionality and ease of use. All available settings of the program can be reached from the main window. The subsurface is discretized using a hybrid mesh generated by the combination of structured and unstructured meshes, which reduces the computational cost of the whole invers...

6. OPTICON: Pro-Matlab software for large order controlled structure design

Science.gov (United States)

Peterson, Lee D.

1989-01-01

A software package for large order controlled structure design is described and demonstrated. The primary program, called OPTICAN, uses both Pro-Matlab M-file routines and selected compiled FORTRAN routines linked into the Pro-Matlab structure. The program accepts structural model information in the form of state-space matrices and performs three basic design functions on the model: (1) open loop analyses; (2) closed loop reduced order controller synthesis; and (3) closed loop stability and performance assessment. The current controller synthesis methods which were implemented in this software are based on the Generalized Linear Quadratic Gaussian theory of Bernstein. In particular, a reduced order Optimal Projection synthesis algorithm based on a homotopy solution method was successfully applied to an experimental truss structure using a 58-state dynamic model. These results are presented and discussed. Current plans to expand the practical size of the design model to several hundred states and the intention to interface Pro-Matlab to a supercomputing environment are discussed.

7. Integration of MATLAB Simulink(Registered Trademark) Models with the Vertical Motion Simulator

Science.gov (United States)

Lewis, Emily K.; Vuong, Nghia D.

2012-01-01

This paper describes the integration of MATLAB Simulink(Registered TradeMark) models into the Vertical Motion Simulator (VMS) at NASA Ames Research Center. The VMS is a high-fidelity, large motion flight simulator that is capable of simulating a variety of aerospace vehicles. Integrating MATLAB Simulink models into the VMS needed to retain the development flexibility of the MATLAB environment and allow rapid deployment of model changes. The process developed at the VMS was used successfully in a number of recent simulation experiments. This accomplishment demonstrated that the model integrity was preserved, while working within the hard real-time run environment of the VMS architecture, and maintaining the unique flexibility of the VMS to meet diverse research requirements.

8. MATLAB as a tool as Analysis and Problem Solving Competency Development in Chemical Engineering Degree using MATLAB

Directory of Open Access Journals (Sweden)

Maria-Fernanda López-Pérez

2016-10-01

The principal purpose of this work is the students improvement using, as has been mentioned previously, MATLAB in a problem-based learning methodology. This methodology allows a more effective coordination in the degree. The present paper presents a real- world problem and the common elements of most problem-solving contexts and how is designed to function across all disciplines.

9. Integration of Modeling in Solidworks and Matlab/Simulink Environments

Directory of Open Access Journals (Sweden)

Cekus Dawid

2014-03-01

Full Text Available W pracy opisano tok postepowania podczas budowy modeli symulacyjnych z wykorzystaniem programu SolidWorks i Matlab/Simulink. Tworzenie modelu symulacyjnego przebiega etapami, to znaczy najpierw opracowywany jest model geometryczny w programie SolidWorks, nastepnie dzieki mozliwosci wymiany danych, model CAD jest implementowany w srodowisku obliczeniowym Matlab/Simulink. Modele SimMechanics pozwalaja na sledzenie wielu parametrów, np. trajektorii, predkosci, czy przyspieszen dowolnych elementów układu złozonego. W pracy, jako przykłady modeli symulacyjnych opracowanych zgodnie z zaprezentowana metoda, pokazano modele laboratoryjnego zurawia samochodowego oraz zurawia lesnego. Modele te umozliwiaja wizualizacje zadanego - za pomoca wymuszen kinematycznych - cyklu pracy.

10. Efficient and Flexible Computation of Many-Electron Wave Function Overlaps.

Science.gov (United States)

Plasser, Felix; Ruckenbauer, Matthias; Mai, Sebastian; Oppel, Markus; Marquetand, Philipp; González, Leticia

2016-03-08

A new algorithm for the computation of the overlap between many-electron wave functions is described. This algorithm allows for the extensive use of recurring intermediates and thus provides high computational efficiency. Because of the general formalism employed, overlaps can be computed for varying wave function types, molecular orbitals, basis sets, and molecular geometries. This paves the way for efficiently computing nonadiabatic interaction terms for dynamics simulations. In addition, other application areas can be envisaged, such as the comparison of wave functions constructed at different levels of theory. Aside from explaining the algorithm and evaluating the performance, a detailed analysis of the numerical stability of wave function overlaps is carried out, and strategies for overcoming potential severe pitfalls due to displaced atoms and truncated wave functions are presented.

11. Fluid Dynamics Theory, Computation, and Numerical Simulation

CERN Document Server

Pozrikidis, Constantine

2009-01-01

Fluid Dynamics: Theory, Computation, and Numerical Simulation is the only available book that extends the classical field of fluid dynamics into the realm of scientific computing in a way that is both comprehensive and accessible to the beginner. The theory of fluid dynamics, and the implementation of solution procedures into numerical algorithms, are discussed hand-in-hand and with reference to computer programming. This book is an accessible introduction to theoretical and computational fluid dynamics (CFD), written from a modern perspective that unifies theory and numerical practice. There are several additions and subject expansions in the Second Edition of Fluid Dynamics, including new Matlab and FORTRAN codes. Two distinguishing features of the discourse are: solution procedures and algorithms are developed immediately after problem formulations are presented, and numerical methods are introduced on a need-to-know basis and in increasing order of difficulty. Matlab codes are presented and discussed for ...

12. On efficiently computing multigroup multi-layer neutron reflection and transmission conditions

International Nuclear Information System (INIS)

Abreu, Marcos P. de

2007-01-01

In this article, we present an algorithm for efficient computation of multigroup discrete ordinates neutron reflection and transmission conditions, which replace a multi-layered boundary region in neutron multiplication eigenvalue computations with no spatial truncation error. In contrast to the independent layer-by-layer algorithm considered thus far in our computations, the algorithm here is based on an inductive approach developed by the present author for deriving neutron reflection and transmission conditions for a nonactive boundary region with an arbitrary number of arbitrarily thick layers. With this new algorithm, we were able to increase significantly the computational efficiency of our spectral diamond-spectral Green's function method for solving multigroup neutron multiplication eigenvalue problems with multi-layered boundary regions. We provide comparative results for a two-group reactor core model to illustrate the increased efficiency of our spectral method, and we conclude this article with a number of general remarks. (author)

13. Efficient Minimum-Phase Prefilter Computation Using Fast QL-Factorization

DEFF Research Database (Denmark)

Hansen, Morten; Christensen, Lars P.B.

2009-01-01

This paper presents a novel approach for computing both the minimum-phase filter and the associated all-pass filter in a computationally efficient way using the fast QL-factorization. A desirable property of this approach is that the complexity is independent on the size of the matrix which is QL...

14. An efficient and rigorous thermodynamic library and optimal-control of a cryogenic air separation unit

DEFF Research Database (Denmark)

Gaspar, Jozsef; Ritschel, Tobias Kasper Skovborg; Jørgensen, John Bagterp

2017-01-01

-linear model based control to achieve optimal techno-economic performance. Accordingly, this work presents a computationally efficient and novel approach for solving a tray-by-tray equilibrium model and its implementation for open-loop optimal-control of a cryogenic distillation column. Here, the optimisation...... objective is to reduce the cost of compression in a volatile electricity market while meeting the production requirements, i.e. product flow rate and purity. This model is implemented in Matlab and uses the ThermoLib rigorous thermodynamic library. The present work represents a first step towards plant...

15. Development and Validation of Reentry Simulation Using MATLAB

National Research Council Canada - National Science Library

Jameson, Jr, Robert E

2006-01-01

This research effort develops a program using MATLAB to solve the equations of motion for atmospheric reentry and analyzes the validity of the program for use as a tool to expeditiously predict reentry profiles...

16. Energy Efficiency in Computing (1/2)

CERN Multimedia

CERN. Geneva

2016-01-01

As manufacturers improve the silicon process, truly low energy computing is becoming a reality - both in servers and in the consumer space. This series of lectures covers a broad spectrum of aspects related to energy efficient computing - from circuits to datacentres. We will discuss common trade-offs and basic components, such as processors, memory and accelerators. We will also touch on the fundamentals of modern datacenter design and operation. Lecturer's short bio: Andrzej Nowak has 10 years of experience in computing technologies, primarily from CERN openlab and Intel. At CERN, he managed a research lab collaborating with Intel and was part of the openlab Chief Technology Office. Andrzej also worked closely and initiated projects with the private sector (e.g. HP and Google), as well as international research institutes, such as EPFL. Currently, Andrzej acts as a consultant on technology and innovation with TIK Services (http://tik.services), and runs a peer-to-peer lending start-up. NB! All Academic L...

17. Automatic and efficient methods applied to the binarization of a subway map

Science.gov (United States)

Durand, Philippe; Ghorbanzadeh, Dariush; Jaupi, Luan

2015-12-01

The purpose of this paper is the study of efficient methods for image binarization. The objective of the work is the metro maps binarization. the goal is to binarize, avoiding noise to disturb the reading of subway stations. Different methods have been tested. By this way, a method given by Otsu gives particularly interesting results. The difficulty of the binarization is the choice of this threshold in order to reconstruct. Image sticky as possible to reality. Vectorization is a step subsequent to that of the binarization. It is to retrieve the coordinates points containing information and to store them in the two matrices X and Y. Subsequently, these matrices can be exported to a file format 'CSV' (Comma Separated Value) enabling us to deal with them in a variety of software including Excel. The algorithm uses quite a time calculation in Matlab because it is composed of two "for" loops nested. But the "for" loops are poorly supported by Matlab, especially in each other. This therefore penalizes the computation time, but seems the only method to do this.

18. Picard Trajectory Approximation Iteration for Efficient Orbit Propagation

Science.gov (United States)

2015-07-21

computing language developed by NVIDIA for use upon their Graphics Processing Units (GPUs); effectively it allows lightweight parallel computation at...Computation Toolbox, and require Matlab 2010 or newer (2011 or newer recommended), and an NVIDIA GPU with compute capability of 1.3 or greater. 3...and Resonances, pp. 216–227, Dordrecht, Holland, 1970. D. Reidel Publishing Company . [4] Zadunaisky, P. E., On the Estimation of Errors Propagated in

19. A Computationally Efficient Method for Polyphonic Pitch Estimation

Directory of Open Access Journals (Sweden)

Ruohua Zhou

2009-01-01

Full Text Available This paper presents a computationally efficient method for polyphonic pitch estimation. The method employs the Fast Resonator Time-Frequency Image (RTFI as the basic time-frequency analysis tool. The approach is composed of two main stages. First, a preliminary pitch estimation is obtained by means of a simple peak-picking procedure in the pitch energy spectrum. Such spectrum is calculated from the original RTFI energy spectrum according to harmonic grouping principles. Then the incorrect estimations are removed according to spectral irregularity and knowledge of the harmonic structures of the music notes played on commonly used music instruments. The new approach is compared with a variety of other frame-based polyphonic pitch estimation methods, and results demonstrate the high performance and computational efficiency of the approach.

20. Changing patient population in Dhaka Hospital and Matlab Hospital of icddr,b.

Science.gov (United States)

Das, S K; Rahman, A; Chisti, M J; Ahmed, S; Malek, M A; Salam, M A; Bardhan, P K; Faruque, A S G

2014-02-01

The Diarrhoeal Disease Surveillance System of icddr,b noted increasing number of patients ≥60 years at urban Dhaka and rural Matlab from 2001 to 2012. Shigella and Vibrio cholerae were more frequently isolated from elderly people than children under 5 years and adults aged 5-59 in both areas. The resistance observed to various drugs of Shigella in Dhaka and Matlab was trimethoprim-sulphamethoxazole (72-63%), ampicillin (43-55%), nalidixic acid (58-61%), mecillinam (12-9%), azithromycin (13-0%), ciprofloxacin (11-13%) and ceftriaxone (11-0%). Vibrio cholerae isolated in Dhaka and Matlab was resistant to trimethoprim-sulphamethoxazole (98-94%), furazolidone (100%), erythromycin (71-53%), tetracycline (46-44%), ciprofloxacin (3-10%) and azithromycin (3-0%). © 2013 John Wiley & Sons Ltd.

1. UmUTracker: A versatile MATLAB program for automated particle tracking of 2D light microscopy or 3D digital holography data

Science.gov (United States)

Zhang, Hanqing; Stangner, Tim; Wiklund, Krister; Rodriguez, Alvaro; Andersson, Magnus

2017-10-01

We present a versatile and fast MATLAB program (UmUTracker) that automatically detects and tracks particles by analyzing video sequences acquired by either light microscopy or digital in-line holographic microscopy. Our program detects the 2D lateral positions of particles with an algorithm based on the isosceles triangle transform, and reconstructs their 3D axial positions by a fast implementation of the Rayleigh-Sommerfeld model using a radial intensity profile. To validate the accuracy and performance of our program, we first track the 2D position of polystyrene particles using bright field and digital holographic microscopy. Second, we determine the 3D particle position by analyzing synthetic and experimentally acquired holograms. Finally, to highlight the full program features, we profile the microfluidic flow in a 100 μm high flow chamber. This result agrees with computational fluid dynamic simulations. On a regular desktop computer UmUTracker can detect, analyze, and track multiple particles at 5 frames per second for a template size of 201 ×201 in a 1024 × 1024 image. To enhance usability and to make it easy to implement new functions we used object-oriented programming. UmUTracker is suitable for studies related to: particle dynamics, cell localization, colloids and microfluidic flow measurement. Program Files doi : http://dx.doi.org/10.17632/fkprs4s6xp.1 Licensing provisions : Creative Commons by 4.0 (CC by 4.0) Programming language : MATLAB Nature of problem: 3D multi-particle tracking is a common technique in physics, chemistry and biology. However, in terms of accuracy, reliable particle tracking is a challenging task since results depend on sample illumination, particle overlap, motion blur and noise from recording sensors. Additionally, the computational performance is also an issue if, for example, a computationally expensive process is executed, such as axial particle position reconstruction from digital holographic microscopy data. Versatile

2. Positive Wigner functions render classical simulation of quantum computation efficient.

Science.gov (United States)

Mari, A; Eisert, J

2012-12-07

We show that quantum circuits where the initial state and all the following quantum operations can be represented by positive Wigner functions can be classically efficiently simulated. This is true both for continuous-variable as well as discrete variable systems in odd prime dimensions, two cases which will be treated on entirely the same footing. Noting the fact that Clifford and Gaussian operations preserve the positivity of the Wigner function, our result generalizes the Gottesman-Knill theorem. Our algorithm provides a way of sampling from the output distribution of a computation or a simulation, including the efficient sampling from an approximate output distribution in the case of sampling imperfections for initial states, gates, or measurements. In this sense, this work highlights the role of the positive Wigner function as separating classically efficiently simulable systems from those that are potentially universal for quantum computing and simulation, and it emphasizes the role of negativity of the Wigner function as a computational resource.

3. Lightweight robotic mobility: template-based modeling for dynamics and controls using ADAMS/car and MATLAB

Science.gov (United States)

Adamczyk, Peter G.; Gorsich, David J.; Hudas, Greg R.; Overholt, James

2003-09-01

The U.S. Army is seeking to develop autonomous off-road mobile robots to perform tasks in the field such as supply delivery and reconnaissance in dangerous territory. A key problem to be solved with these robots is off-road mobility, to ensure that the robots can accomplish their tasks without loss or damage. We have developed a computer model of one such concept robot, the small-scale "T-1" omnidirectional vehicle (ODV), to study the effects of different control strategies on the robot's mobility in off-road settings. We built the dynamic model in ADAMS/Car and the control system in Matlab/Simulink. This paper presents the template-based method used to construct the ADAMS model of the T-1 ODV. It discusses the strengths and weaknesses of ADAMS/Car software in such an application, and describes the benefits and challenges of the approach as a whole. The paper also addresses effective linking of ADAMS/Car and Matlab for complete control system development. Finally, this paper includes a section describing the extension of the T-1 templates to other similar ODV concepts for rapid development.

4. Control system design and validation platform development for small pressurized water reactors (SPWR) by coupling an engineering simulator and MATLAB/Simulink

International Nuclear Information System (INIS)

Sun, Peiwei; Zhao, Huanhuan; Liao, Longtao; Zhang, Jianmin; Su, Guanghui

2017-01-01

Highlights: • An SPWR control system design and validation platform is developed. • The platform is developed by coupling MATLAB/Simulink and an engineering simulator. • SPWR is modeled using Relap5 and preliminary control system is designed. • The platform is verified through numerical simulation over two typical load patterns. - Abstract: Significant progress has been made in the development of the small pressurized water reactors (SPWR). Unique characteristics of the SPWR deliver challenges to its control system design. In order to facilitate the control system design process and enhance its efficiency, it is important and necessary to establish a control system design and validation platform. Using shared memory technology, an engineering simulator coupled with MATLAB/Simulink is employed to achieve this objective. Shared memory is an efficient method to exchange data within programs. Dynamic data exchange and simulation time synchronization methods are particularly treated. To verify the platform, an SPWR with its control system is modeled using the platform and the simulator. Thermal-hydraulic modeling of the SPWR is carried out using Relap5, and its nodalization is introduced. The objectives of the control strategy are to maintain the average coolant temperature linearly varying with the reactor power and steam pressure constant. A preliminary SPWR control system is designed with proportional-integral-derivative (PID) controllers, and is implemented in MATLAB/Simulink associated with the engineering simulator. Subsequently, in order to evaluate the performance of the established simulation platform, transients of abrupt load changes and wide range load changes are simulated and simulation results are verified against those obtained from the engineering simulator alone. It is demonstrated that simulation results of both platforms are consistent with each other, which proves that the coupling of engineering simulator and MATLAB/Simulink is successful

5. Spin-neurons: A possible path to energy-efficient neuromorphic computers

Energy Technology Data Exchange (ETDEWEB)

Sharad, Mrigank; Fan, Deliang; Roy, Kaushik [School of Electrical and Computer Engineering, Purdue University, West Lafayette, Indiana 47907 (United States)

2013-12-21

Recent years have witnessed growing interest in the field of brain-inspired computing based on neural-network architectures. In order to translate the related algorithmic models into powerful, yet energy-efficient cognitive-computing hardware, computing-devices beyond CMOS may need to be explored. The suitability of such devices to this field of computing would strongly depend upon how closely their physical characteristics match with the essential computing primitives employed in such models. In this work, we discuss the rationale of applying emerging spin-torque devices for bio-inspired computing. Recent spin-torque experiments have shown the path to low-current, low-voltage, and high-speed magnetization switching in nano-scale magnetic devices. Such magneto-metallic, current-mode spin-torque switches can mimic the analog summing and “thresholding” operation of an artificial neuron with high energy-efficiency. Comparison with CMOS-based analog circuit-model of a neuron shows that “spin-neurons” (spin based circuit model of neurons) can achieve more than two orders of magnitude lower energy and beyond three orders of magnitude reduction in energy-delay product. The application of spin-neurons can therefore be an attractive option for neuromorphic computers of future.

6. Introducing Effects in an Image: A MATLAB Approach

OpenAIRE

Kumar , Vinay; Sood , Saurabh; Mishra , Shruti

2008-01-01

A detailed study of introducing morning, night, and some more effect in an image is discussed, the original image is clicked in the morning. Several examples have also been discussed. MATLAB is used for the processing.

7. WellReader: a MATLAB program for the analysis of fluorescence and luminescence reporter gene data.

Science.gov (United States)

Boyer, Frédéric; Besson, Bruno; Baptist, Guillaume; Izard, Jérôme; Pinel, Corinne; Ropers, Delphine; Geiselmann, Johannes; de Jong, Hidde

2010-05-01

Fluorescent and luminescent reporter gene systems in combination with automated microplate readers allow real-time monitoring of gene expression on the population level at high precision and sampling density. This generates large amounts of data for the analysis of which computer tools are missing to date. We have developed WellReader, a MATLAB program for the analysis of fluorescent and luminescent reporter gene data. WellReader allows the user to load the output files of microplate readers, remove outliers, correct for background effects and smooth and fit the data. Moreover, it computes biologically relevant quantities from the measured signals, notably promoter activities and protein concentrations, and compares the resulting expression profiles of different genes under different conditions. WellReader is available under a LGPL licence at http://prabi1.inrialpes.fr/trac/wellreader.

8. Matlab/Simulink Implementation of Wave-based Models for Microstrip Structures utilizing Short-circuited and Opened Stubs

Directory of Open Access Journals (Sweden)

Biljana P. Stošić

2011-12-01

Full Text Available This paper describes modeling and analyzing procedures for microstrip filters based on use of one-dimensional wave digital approach. Different filter structures are observed. One filter is based on quarter-wave length short-circuited stubs and connecting transmission lines. The other one is based on cross-junction opened stubs. Frequency responses are obtained by direct analysis of the block-based networks formed in Simulink toolbox of MATLAB environment. This wave-based method allows an accurate and efficient analysis of different microwave structures.

9. MATLAB/SIMULINK model of CANDU reactor for control studies

International Nuclear Information System (INIS)

Javidnia, H.; Jiang, J.

2006-01-01

In this paper a MATLAB/SIMULINK model is developed for a CANDU type reactor. The data for the reactor are taken from an Indian PHWR, which is very similar to CANDU in its design. Among the different feedback mechanisms in the core of the reactor, only xenon has been considered which plays an important role in spatial oscillations. The model is verified under closed loop scenarios with simple PI controller. The results of the simulation show that this model can be used for controller design and simulation of the reactor systems. Adding models of the other components of a CANDU reactor would ultimately result in a complete model of CANDU plant in MATLAB/SIMULINK. (author)

10. The thermodynamic efficiency of computations made in cells across the range of life

Science.gov (United States)

Kempes, Christopher P.; Wolpert, David; Cohen, Zachary; Pérez-Mercader, Juan

2017-11-01

Biological organisms must perform computation as they grow, reproduce and evolve. Moreover, ever since Landauer's bound was proposed, it has been known that all computation has some thermodynamic cost-and that the same computation can be achieved with greater or smaller thermodynamic cost depending on how it is implemented. Accordingly an important issue concerning the evolution of life is assessing the thermodynamic efficiency of the computations performed by organisms. This issue is interesting both from the perspective of how close life has come to maximally efficient computation (presumably under the pressure of natural selection), and from the practical perspective of what efficiencies we might hope that engineered biological computers might achieve, especially in comparison with current computational systems. Here we show that the computational efficiency of translation, defined as free energy expended per amino acid operation, outperforms the best supercomputers by several orders of magnitude, and is only about an order of magnitude worse than the Landauer bound. However, this efficiency depends strongly on the size and architecture of the cell in question. In particular, we show that the useful efficiency of an amino acid operation, defined as the bulk energy per amino acid polymerization, decreases for increasing bacterial size and converges to the polymerization cost of the ribosome. This cost of the largest bacteria does not change in cells as we progress through the major evolutionary shifts to both single- and multicellular eukaryotes. However, the rates of total computation per unit mass are non-monotonic in bacteria with increasing cell size, and also change across different biological architectures, including the shift from unicellular to multicellular eukaryotes. This article is part of the themed issue 'Reconceptualizing the origins of life'.

11. Intelligent traffic lights based on MATLAB

Science.gov (United States)

Nie, Ying

2018-04-01

In this paper, I describes the traffic lights system and it has some. Through analysis, I used MATLAB technology, transformed the camera photographs into digital signals. Than divided the road vehicle is into three methods: very congestion, congestion, a little congestion. Through the MCU programming, solved the different roads have different delay time, and Used this method, saving time and resources, so as to reduce road congestion.

12. Fluid dynamics theory, computation, and numerical simulation

CERN Document Server

Pozrikidis, C

2001-01-01

Fluid Dynamics Theory, Computation, and Numerical Simulation is the only available book that extends the classical field of fluid dynamics into the realm of scientific computing in a way that is both comprehensive and accessible to the beginner The theory of fluid dynamics, and the implementation of solution procedures into numerical algorithms, are discussed hand-in-hand and with reference to computer programming This book is an accessible introduction to theoretical and computational fluid dynamics (CFD), written from a modern perspective that unifies theory and numerical practice There are several additions and subject expansions in the Second Edition of Fluid Dynamics, including new Matlab and FORTRAN codes Two distinguishing features of the discourse are solution procedures and algorithms are developed immediately after problem formulations are presented, and numerical methods are introduced on a need-to-know basis and in increasing order of difficulty Matlab codes are presented and discussed for a broad...

13. PFA toolbox: a MATLAB tool for Metabolic Flux Analysis.

Science.gov (United States)

Morales, Yeimy; Bosque, Gabriel; Vehí, Josep; Picó, Jesús; Llaneras, Francisco

2016-07-11

Metabolic Flux Analysis (MFA) is a methodology that has been successfully applied to estimate metabolic fluxes in living cells. However, traditional frameworks based on this approach have some limitations, particularly when measurements are scarce and imprecise. This is very common in industrial environments. The PFA Toolbox can be used to face those scenarios. Here we present the PFA (Possibilistic Flux Analysis) Toolbox for MATLAB, which simplifies the use of Interval and Possibilistic Metabolic Flux Analysis. The main features of the PFA Toolbox are the following: (a) It provides reliable MFA estimations in scenarios where only a few fluxes can be measured or those available are imprecise. (b) It provides tools to easily plot the results as interval estimates or flux distributions. (c) It is composed of simple functions that MATLAB users can apply in flexible ways. (d) It includes a Graphical User Interface (GUI), which provides a visual representation of the measurements and their uncertainty. (e) It can use stoichiometric models in COBRA format. In addition, the PFA Toolbox includes a User's Guide with a thorough description of its functions and several examples. The PFA Toolbox for MATLAB is a freely available Toolbox that is able to perform Interval and Possibilistic MFA estimations.

14. Wireless-Uplinks-Based Energy-Efficient Scheduling in Mobile Cloud Computing

OpenAIRE

Xing Liu; Chaowei Yuan; Zhen Yang; Enda Peng

2015-01-01

Mobile cloud computing (MCC) combines cloud computing and mobile internet to improve the computational capabilities of resource-constrained mobile devices (MDs). In MCC, mobile users could not only improve the computational capability of MDs but also save operation consumption by offloading the mobile applications to the cloud. However, MCC faces the problem of energy efficiency because of time-varying channels when the offloading is being executed. In this paper, we address the issue of ener...

15. Recovery Act - CAREER: Sustainable Silicon -- Energy-Efficient VLSI Interconnect for Extreme-Scale Computing

Energy Technology Data Exchange (ETDEWEB)

Chiang, Patrick [Oregon State Univ., Corvallis, OR (United States)

2014-01-31

The research goal of this CAREER proposal is to develop energy-efficient, VLSI interconnect circuits and systems that will facilitate future massively-parallel, high-performance computing. Extreme-scale computing will exhibit massive parallelism on multiple vertical levels, from thou­ sands of computational units on a single processor to thousands of processors in a single data center. Unfortunately, the energy required to communicate between these units at every level (on­ chip, off-chip, off-rack) will be the critical limitation to energy efficiency. Therefore, the PI's career goal is to become a leading researcher in the design of energy-efficient VLSI interconnect for future computing systems.

16. The use of MATLAB-SIMULINK for evaluation of thermal building behavior; O uso do MATLAB-SIMULINK para avaliacao do comportamento termico de ambientes

Energy Technology Data Exchange (ETDEWEB)

Mendes, Nathan; Oliveira, Gustavo H.C.; Araujo, Humberto X. de [Pontificia Universidade Catolica do Parana, Curitiba, PR (Brazil). Lab. de Sistemas Termicos]|[Pontificia Universidade Catolica do Parana, Curitiba, PR (Brazil). Lab. de Automacao e Sistemas]. E-mail: nmendes@ccet.pucpr.br; oliv@ ccet.pucpr.br; araujo@ ccet.pucpr.br

2000-07-01

We describe a mathematical model applied to both building thermal analysis and control systems design. We use a lumped approach to model the room air temperature and a multi-layer model for the building envelope. The capacitance model allows to study the transient analysis of room air temperature when it is submitted to sinusoidal variation of external air temperature, representing a case study for the city of Curitiba-PR, Brazil. To evaluate the building performance with thermal parameters, we use MATLAB/SIMULINK. In the results section, we show the influences of thermal capacitance on the building air temperature and energy consumption and the advantages of using MATLAB/SIMULINK in building thermal and energy analysis as well. (author)

17. Computer Architecture for Energy Efficient SFQ

Science.gov (United States)

2014-08-27

IBM Corporation (T.J. Watson Research Laboratory) 1101 Kitchawan Road Yorktown Heights, NY 10598 -0000 2 ABSTRACT Number of Papers published in peer...accomplished during this ARO-sponsored project at IBM Research to identify and model an energy efficient SFQ-based computer architecture. The... IBM Windsor Blue (WB), illustrated schematically in Figure 2. The basic building block of WB is a "tile" comprised of a 64-bit arithmetic logic unit

18. Efficient conjugate gradient algorithms for computation of the manipulator forward dynamics

Science.gov (United States)

Fijany, Amir; Scheid, Robert E.

1989-01-01

The applicability of conjugate gradient algorithms for computation of the manipulator forward dynamics is investigated. The redundancies in the previously proposed conjugate gradient algorithm are analyzed. A new version is developed which, by avoiding these redundancies, achieves a significantly greater efficiency. A preconditioned conjugate gradient algorithm is also presented. A diagonal matrix whose elements are the diagonal elements of the inertia matrix is proposed as the preconditioner. In order to increase the computational efficiency, an algorithm is developed which exploits the synergism between the computation of the diagonal elements of the inertia matrix and that required by the conjugate gradient algorithm.

19. Design and fabrication of diffractive optical elements with MATLAB

National Research Council Canada - National Science Library

Bhattacharya, Shanti (Professor in Optics); Vijayakumar, Anand

2017-01-01

... their diffraction patterns using MATLAB. The fundamentals of fabrication techniques such as photolithography, electron beam lithography, and focused ion beam lithography with basic instructions for the beginner are presented...

20. On the efficient parallel computation of Legendre transforms

NARCIS (Netherlands)

Inda, M.A.; Bisseling, R.H.; Maslen, D.K.

2001-01-01

In this article, we discuss a parallel implementation of efficient algorithms for computation of Legendre polynomial transforms and other orthogonal polynomial transforms. We develop an approach to the Driscoll-Healy algorithm using polynomial arithmetic and present experimental results on the

1. On the efficient parallel computation of Legendre transforms

NARCIS (Netherlands)

Inda, M.A.; Bisseling, R.H.; Maslen, D.K.

1999-01-01

In this article we discuss a parallel implementation of efficient algorithms for computation of Legendre polynomial transforms and other orthogonal polynomial transforms. We develop an approach to the Driscoll-Healy algorithm using polynomial arithmetic and present experimental results on the

2. Computationally efficient clustering of audio-visual meeting data

NARCIS (Netherlands)

Hung, H.; Friedland, G.; Yeo, C.; Shao, L.; Shan, C.; Luo, J.; Etoh, M.

2010-01-01

This chapter presents novel computationally efficient algorithms to extract semantically meaningful acoustic and visual events related to each of the participants in a group discussion using the example of business meeting recordings. The recording setup involves relatively few audio-visual sensors,

3. Efficient computation method of Jacobian matrix

International Nuclear Information System (INIS)

Sasaki, Shinobu

1995-05-01

As well known, the elements of the Jacobian matrix are complex trigonometric functions of the joint angles, resulting in a matrix of staggering complexity when we write it all out in one place. This article addresses that difficulties to this subject are overcome by using velocity representation. The main point is that its recursive algorithm and computer algebra technologies allow us to derive analytical formulation with no human intervention. Particularly, it is to be noted that as compared to previous results the elements are extremely simplified throughout the effective use of frame transformations. Furthermore, in case of a spherical wrist, it is shown that the present approach is computationally most efficient. Due to such advantages, the proposed method is useful in studying kinematically peculiar properties such as singularity problems. (author)

4. Improving robustness and computational efficiency using modern C++

International Nuclear Information System (INIS)

Paterno, M; Kowalkowski, J; Green, C

2014-01-01

For nearly two decades, the C++ programming language has been the dominant programming language for experimental HEP. The publication of ISO/IEC 14882:2011, the current version of the international standard for the C++ programming language, makes available a variety of language and library facilities for improving the robustness, expressiveness, and computational efficiency of C++ code. However, much of the C++ written by the experimental HEP community does not take advantage of the features of the language to obtain these benefits, either due to lack of familiarity with these features or concern that these features must somehow be computationally inefficient. In this paper, we address some of the features of modern C+-+, and show how they can be used to make programs that are both robust and computationally efficient. We compare and contrast simple yet realistic examples of some common implementation patterns in C, currently-typical C++, and modern C++, and show (when necessary, down to the level of generated assembly language code) the quality of the executable code produced by recent C++ compilers, with the aim of allowing the HEP community to make informed decisions on the costs and benefits of the use of modern C++.

5. Numerical assessment of efficiency and control stability of an HTS synchronous motor

Energy Technology Data Exchange (ETDEWEB)

Xian Wei; Yuan Weijia; Coombs, T A, E-mail: wx210@cam.ac.u [Electronic, Power and Energy Conversion Group, Engineering Department, Cambridge University, 9 JJ Thomson Avenue, Cambridge CB3 0FA (United Kingdom)

2010-06-01

A high temperature superconducting (HTS) permanent magnet synchronous motor (PMSM) is designed and developed in Cambridge University. It is expected to become cost competitive with the conventional PMSM owing to its high efficiency, high power density, high torque density, etc. The structure and parameters of HTS PMSM are detailed. Both AC losses by transport current and applied filed in stator armature winding of HTS PMSM are also analyzed. Computed and simulated results of the characteristics of the HTS PMSM and conventional PMSM are compared. The improvement on stability of direct torque control (DTC) on the HTS PMSM is estimated, and proved by simulation on Matlab/Simulink.

6. Efficient quantum circuits for one-way quantum computing.

Science.gov (United States)

Tanamoto, Tetsufumi; Liu, Yu-Xi; Hu, Xuedong; Nori, Franco

2009-03-13

While Ising-type interactions are ideal for implementing controlled phase flip gates in one-way quantum computing, natural interactions between solid-state qubits are most often described by either the XY or the Heisenberg models. We show an efficient way of generating cluster states directly using either the imaginary SWAP (iSWAP) gate for the XY model, or the sqrt[SWAP] gate for the Heisenberg model. Our approach thus makes one-way quantum computing more feasible for solid-state devices.

7. Design of PR current control with selective harmonic compensators using Matlab

Directory of Open Access Journals (Sweden)

Daniel Zammit

2017-12-01

Full Text Available This paper presents a procedure to design a Proportional Resonant (PR current controller with additional PR selective harmonic compensators for Grid Connected Photovoltaic (PV Inverters. The design of the PR current control and the harmonic compensators will be carried out using Matlab. Testing was carried out on a 3 kW Grid-Connected PV Inverter which was designed and constructed for this research. Both simulation and experimental results will be presented. Keywords: Inverters, Proportional-resonant controllers, Harmonic compensation, Photovoltaic, Matlab, SISO design tool

8. A Matlab-based finite-difference solver for the Poisson problem with mixed Dirichlet-Neumann boundary conditions

Science.gov (United States)

Reimer, Ashton S.; Cheviakov, Alexei F.

2013-03-01

A Matlab-based finite-difference numerical solver for the Poisson equation for a rectangle and a disk in two dimensions, and a spherical domain in three dimensions, is presented. The solver is optimized for handling an arbitrary combination of Dirichlet and Neumann boundary conditions, and allows for full user control of mesh refinement. The solver routines utilize effective and parallelized sparse vector and matrix operations. Computations exhibit high speeds, numerical stability with respect to mesh size and mesh refinement, and acceptable error values even on desktop computers. Catalogue identifier: AENQ_v1_0 Program summary URL:http://cpc.cs.qub.ac.uk/summaries/AENQ_v1_0.html Program obtainable from: CPC Program Library, Queen's University, Belfast, N. Ireland Licensing provisions: GNU General Public License v3.0 No. of lines in distributed program, including test data, etc.: 102793 No. of bytes in distributed program, including test data, etc.: 369378 Distribution format: tar.gz Programming language: Matlab 2010a. Computer: PC, Macintosh. Operating system: Windows, OSX, Linux. RAM: 8 GB (8, 589, 934, 592 bytes) Classification: 4.3. Nature of problem: To solve the Poisson problem in a standard domain with “patchy surface”-type (strongly heterogeneous) Neumann/Dirichlet boundary conditions. Solution method: Finite difference with mesh refinement. Restrictions: Spherical domain in 3D; rectangular domain or a disk in 2D. Unusual features: Choice between mldivide/iterative solver for the solution of large system of linear algebraic equations that arise. Full user control of Neumann/Dirichlet boundary conditions and mesh refinement. Running time: Depending on the number of points taken and the geometry of the domain, the routine may take from less than a second to several hours to execute.

9. Energy-efficient computing and networking. Revised selected papers

Energy Technology Data Exchange (ETDEWEB)

Hatziargyriou, Nikos; Dimeas, Aris [Ethnikon Metsovion Polytechneion, Athens (Greece); Weidlich, Anke (eds.) [SAP Research Center, Karlsruhe (Germany); Tomtsi, Thomai

2011-07-01

This book constitutes the postproceedings of the First International Conference on Energy-Efficient Computing and Networking, E-Energy, held in Passau, Germany in April 2010. The 23 revised papers presented were carefully reviewed and selected for inclusion in the post-proceedings. The papers are organized in topical sections on energy market and algorithms, ICT technology for the energy market, implementation of smart grid and smart home technology, microgrids and energy management, and energy efficiency through distributed energy management and buildings. (orig.)

10. Availability of MCNP and MATLAB for reconstructing the water-vapor two-phase flow pattern in neutron radiography

International Nuclear Information System (INIS)

Feng Qixi; Feng Quanke; Takeshi, K.

2008-01-01

The China Advanced Research Reactor (CARR) is scheduled to be operated in the autumn of 2008. In this paper, we report preparations for installing the neutron radiography instrument (NRI) and for utilizing it efficiently. The 2-D relative neutron intensity profiles for the water-vapor two-phase flow inside the tube were obtained using the MCNP code without influence of γ-ray and electronic-noise. The MCNP simulation of the 2-D neutron intensity profile for the water-vapor two-phase flow was demonstrated. The simulated 2-D neutron intensity profiles could be used as the benchmark data base by calibrating part of the data measured by the CARR-NRI. The 3-D objective images allow us to understand the flow pattern more clearly and it is reconstructed using the MATLAB through the threshold transformation techniques. And thus it is concluded that the MCNP code and the MATLAB are very useful for constructing the benchmark data base for the investigation of the water-vapor two-phase flow using the CARR-NRI. (authors)

11. Wireless-Uplinks-Based Energy-Efficient Scheduling in Mobile Cloud Computing

Directory of Open Access Journals (Sweden)

Xing Liu

2015-01-01

Full Text Available Mobile cloud computing (MCC combines cloud computing and mobile internet to improve the computational capabilities of resource-constrained mobile devices (MDs. In MCC, mobile users could not only improve the computational capability of MDs but also save operation consumption by offloading the mobile applications to the cloud. However, MCC faces the problem of energy efficiency because of time-varying channels when the offloading is being executed. In this paper, we address the issue of energy-efficient scheduling for wireless uplink in MCC. By introducing Lyapunov optimization, we first propose a scheduling algorithm that can dynamically choose channel to transmit data based on queue backlog and channel statistics. Then, we show that the proposed scheduling algorithm can make a tradeoff between queue backlog and energy consumption in a channel-aware MCC system. Simulation results show that the proposed scheduling algorithm can reduce the time average energy consumption for offloading compared to the existing algorithm.

12. INTEGRACIÓN DE COMPONENTES COM DE MATLAB/SIMULINK EN EL ENTORNO CASE XBDK, PARA EL MODELADO DE SISTEMAS DE CONFORMACIÓN DE HAZ MATLAB/SIMULINK COM COMPONENT INTEGRATION FOR XBDK CASE ENVIRONMENT, ORIENTED TO BEAMFORMING APLICATIONS

Directory of Open Access Journals (Sweden)

Mariano Raboso Mateos

2009-04-01

Full Text Available En este artículo se describe la interfaz de acceso a Matlab desde la plataforma XBDK (XML-Based Beamforming Development Kit. La contribución más novedosa es la utilización del lenguaje de script Tcl/Tk para el acceso al entorno Matlab utilizando las interfaces COM, ofrecidas por el servicio Matlab Automation Server. La utilización de lenguajes de script tiene innumerables ventajas a la hora de diseñar, construir y depurar prototipos o automatizar procesos. Muchas de las herramientas que se utilizan hoy en día para procesado de señal de una u otra manera permiten la utilización de lenguajes de script. La combinación de un lenguaje de script, con la posibilidad de acceder de forma detallada a los servicios de Matlab, proporciona una manera flexible, rápida y potente, de integrar servicios en una herramienta CASE integrada como XBDK.This paper describes Matlab access within the XBDK (XML-Based Beamforming Development Kit platform. A well-known script language named Tcl/Tk has been used to perform Matlab COM interfacing, a powerful and little known mechanism, provided by Matlab Automation Server. Automation processing or prototype development, take advantage from script languages such Tcl/Tk. Most recent digital signal processing tools, provide mechanisms to be invoked by script languages. A language script plus COM integration, performs a detail, flexible, quick and powerful mechanism to provide services for a CASE integrated development environment such XBDK.

13. Perspective: Memcomputing: Leveraging memory and physics to compute efficiently

Science.gov (United States)

Di Ventra, Massimiliano; Traversa, Fabio L.

2018-05-01

It is well known that physical phenomena may be of great help in computing some difficult problems efficiently. A typical example is prime factorization that may be solved in polynomial time by exploiting quantum entanglement on a quantum computer. There are, however, other types of (non-quantum) physical properties that one may leverage to compute efficiently a wide range of hard problems. In this perspective, we discuss how to employ one such property, memory (time non-locality), in a novel physics-based approach to computation: Memcomputing. In particular, we focus on digital memcomputing machines (DMMs) that are scalable. DMMs can be realized with non-linear dynamical systems with memory. The latter property allows the realization of a new type of Boolean logic, one that is self-organizing. Self-organizing logic gates are "terminal-agnostic," namely, they do not distinguish between the input and output terminals. When appropriately assembled to represent a given combinatorial/optimization problem, the corresponding self-organizing circuit converges to the equilibrium points that express the solutions of the problem at hand. In doing so, DMMs take advantage of the long-range order that develops during the transient dynamics. This collective dynamical behavior, reminiscent of a phase transition, or even the "edge of chaos," is mediated by families of classical trajectories (instantons) that connect critical points of increasing stability in the system's phase space. The topological character of the solution search renders DMMs robust against noise and structural disorder. Since DMMs are non-quantum systems described by ordinary differential equations, not only can they be built in hardware with the available technology, they can also be simulated efficiently on modern classical computers. As an example, we will show the polynomial-time solution of the subset-sum problem for the worst cases, and point to other types of hard problems where simulations of DMMs

14. ANSYS-MATLAB co-simulation of mucus flow distribution and clearance effectiveness of a new simulated cough device.

Science.gov (United States)

Ren, Shuai; Shi, Yan; Cai, Maolin; Zhao, Hongmei; Zhang, Zhaozhi; Zhang, Xiaohua Douglas

2018-03-05

Coughing is an irritable reaction that protects the respiratory system from infection and improves mucus clearance. However, for the patients who cannot cough autonomously, an assisted cough device is essential for mucus clearance. Considering the low efficiency of current assisted cough devices, a new simulated cough device based on the pneumatic system is proposed in this paper. Given the uncertainty of airflow rates necessary to clear mucus from airways, the computational fluid dynamics Eulerian wall film model and cough efficiency (CE) were used in this study to simulate the cough process and evaluate cough effectiveness. The Ansys-Matlab co-simulation model was set up and verified through experimental studies using Newtonian fluids. Next, model simulations were performed using non-Newtonian fluids, and peak cough flow (PCF) and PCF duration time were analyzed to determine their influence on mucus clearance. CE growth rate (λ) was calculated to reflect the CE variation trend. From the numerical simulation results, we find that CE rises as PCF increases while the growth rate trends to slow as PCF increases; when PCF changes from 60 to 360 L/min, CE changes from 3.2% to 51.5% which is approximately 16 times the initial value. Meanwhile, keeping a long PCF duration time could greatly improve CE under the same cough expired volume and PCF. The results indicated that increasing the PCF and PCF duration time can improve the efficiency of mucus clearance. This paper provides a new approach and a research direction for control strategy in simulated cough devices for airway mucus clearance. Copyright © 2018 John Wiley & Sons, Ltd.

15. Parametric design of silo steel framework of concrete mixing station based on the finite element method and MATLAB

Directory of Open Access Journals (Sweden)

Long Hui

2016-01-01

Full Text Available When the structure of the silo steel framework of concrete mixing station is designed, In most cases, the dimension parameters, shape parameters and position parameters of silo steel framework beams are changed as the productivity adjustment of the concrete mixing station, but the structure types of silo steel framework will remain the same. In order to acquire strength of silo steel framework rapidly and efficiently, it is need to provide specialized parametric strength computational software for engineering staff who does not understand the three-dimensional software such as PROE and finite element analysis software. By the finite element methods(FEM, the parametric stress calculation modal of the silo steel framework of concrete mixing station is established, which includes dimension parameters, shape parameters, position parameters and applied load parameters of each beams, and then the parametric calculation program is written with MATLAB. The stress equations reflect the internal relationship between the stress of the silo steel frames with the dimension parameters, shape parameters, position parameters and load parameters. Finally, an example is presented, the calculation results show the stress of all members and the size and location of the maximum stress, which agrees well with realistic cases.

16. Hyperspectral imaging in medicine: image pre-processing problems and solutions in Matlab.

Science.gov (United States)

Koprowski, Robert

2015-11-01

The paper presents problems and solutions related to hyperspectral image pre-processing. New methods of preliminary image analysis are proposed. The paper shows problems occurring in Matlab when trying to analyse this type of images. Moreover, new methods are discussed which provide the source code in Matlab that can be used in practice without any licensing restrictions. The proposed application and sample result of hyperspectral image analysis. © 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

17. Digital signal processing for wireless communication using Matlab

CERN Document Server

Gopi, E S

2016-01-01

This book examines signal processing techniques used in wireless communication illustrated by using the Matlab program. The author discusses these techniques as they relate to Doppler spread; delay spread; Rayleigh and Rician channel modeling; rake receiver; diversity techniques; MIMO and OFDM -based transmission techniques; and array signal processing. Related topics such as detection theory, link budget, multiple access techniques, and spread spectrum are also covered.   ·         Illustrates signal processing techniques involved in wireless communication using Matlab ·         Discusses multiple access techniques such as Frequency division multiple access, Time division multiple access, and Code division multiple access ·         Covers band pass modulation techniques such as Binary phase shift keying, Differential phase shift keying, Quadrature phase shift keying, Binary frequency shift keying, Minimum shift keying, and Gaussian minimum shift keying.

18. KiT: a MATLAB package for kinetochore tracking.

Science.gov (United States)

Armond, Jonathan W; Vladimirou, Elina; McAinsh, Andrew D; Burroughs, Nigel J

2016-06-15

During mitosis, chromosomes are attached to the mitotic spindle via large protein complexes called kinetochores. The motion of kinetochores throughout mitosis is intricate and automated quantitative tracking of their motion has already revealed many surprising facets of their behaviour. Here, we present 'KiT' (Kinetochore Tracking)-an easy-to-use, open-source software package for tracking kinetochores from live-cell fluorescent movies. KiT supports 2D, 3D and multi-colour movies, quantification of fluorescence, integrated deconvolution, parallel execution and multiple algorithms for particle localization. KiT is free, open-source software implemented in MATLAB and runs on all MATLAB supported platforms. KiT can be downloaded as a package from http://www.mechanochemistry.org/mcainsh/software.php The source repository is available at https://bitbucket.org/jarmond/kit and under continuing development. Supplementary data are available at Bioinformatics online. jonathan.armond@warwick.ac.uk. © The Author 2016. Published by Oxford University Press.

19. Radar signal analysis and processing using Matlab

CERN Document Server

Mahafza, Bassem R

2008-01-01

Offering radar-related software for the analysis and design of radar waveform and signal processing, this book provides comprehensive coverage of radar signals and signal processing techniques and algorithms. It contains numerous graphical plots, common radar-related functions, table format outputs, and end-of-chapter problems. The complete set of MATLAB[registered] functions and routines are available for download online.

20. Simulation, design and thermal analysis of a solar Stirling engine using MATLAB

International Nuclear Information System (INIS)

Shazly, J.H.; Hafez, A.Z.; El Shenawy, E.T.; Eteiba, M.B.

2014-01-01

Highlights: • Modeling and simulation for a prototype of the solar-powered Stirling engine. • The solar-powered Stirling engine working at the low temperature range. • Estimating output power from the solar Stirling engine using Matlab program. • Solar radiation simulation program presents a solar radiation data using MATLAB. - Abstract: This paper presents the modeling and simulation for a prototype of the solar-powered Stirling engine working at the low temperature range. A mathematical model for the thermal analysis of the solar-powered low temperature Stirling engine with heat transfer is developed using Matlab program. The model takes into consideration the effect of the absorber temperature on the thermal analysis like as radiation and convection heat transfer between the absorber and the working fluid as well as radiation and convection heat transfer between the lower temperature plate and the working fluid. Hence, the present analysis provides a theoretical guidance for designing and operating of the solar-powered low temperature Stirling engine system, as well as estimating output power from the solar Stirling engine using Matlab program. This study attempts to demonstrate the potential of the low temperature Stirling engine as an option for the prime movers for Photovoltaic tracking systems. The heat source temperature is 40–60 °C as the temperature available from the sun directly

1. Moosh: A Numerical Swiss Army Knife for the Optics of Multilayers in Octave/Matlab

Directory of Open Access Journals (Sweden)

Josselin Defrance

2016-04-01

Full Text Available The aim of Moosh is to provide a complete set of tools to compute all the optical properties of any multilayered structure: reflection, transmission, absorption spectra, as well as gaussian beam propagation or guided modes. It can be seen as a semi-analytic (making it light and fast solver for Maxwell’s equations in multilayers. It is written in Octave/Matlab, available on Github and based on scattering matrices, making it perfectly stable. This software is meant to be extremely easy to (reuse, and could prove useful in many research areas like photovoltaics, plasmonics and nanophotonics, as well as for educational purposes for the large number of physical phenomena it can illustrate.

2. Benchmark Simulation Model No 2 in Matlab-Simulink

DEFF Research Database (Denmark)

Vrecko, Darko; Gernaey, Krist; Rosen, Christian

2006-01-01

In this paper, implementation of the Benchmark Simulation Model No 2 (BSM2) within Matlab-Simulink is presented. The BSM2 is developed for plant-wide WWTP control strategy evaluation on a long-term basis. It consists of a pre-treatment process, an activated sludge process and sludge treatment...

3. Elementary mechanics using Matlab a modern course combining analytical and numerical techniques

CERN Document Server

Malthe-Sørenssen, Anders

2015-01-01

This book – specifically developed as a novel textbook on elementary classical mechanics – shows how analytical and numerical methods can be seamlessly integrated to solve physics problems. This approach allows students to solve more advanced and applied problems at an earlier stage and equips them to deal with real-world examples well beyond the typical special cases treated in standard textbooks. Another advantage of this approach is that students are brought closer to the way physics is actually discovered and applied, as they are introduced right from the start to a more exploratory way of understanding phenomena and of developing their physical concepts. While not a requirement, it is advantageous for the reader to have some prior knowledge of scientific programming with a scripting-type language. This edition of the book uses Matlab, and a chapter devoted to the basics of scientific programming with Matlab is included. A parallel edition using Python instead of Matlab is also available. Last but not...

4. Design of high-performance parallelized gene predictors in MATLAB.

Science.gov (United States)

Rivard, Sylvain Robert; Mailloux, Jean-Gabriel; Beguenane, Rachid; Bui, Hung Tien

2012-04-10

This paper proposes a method of implementing parallel gene prediction algorithms in MATLAB. The proposed designs are based on either Goertzel's algorithm or on FFTs and have been implemented using varying amounts of parallelism on a central processing unit (CPU) and on a graphics processing unit (GPU). Results show that an implementation using a straightforward approach can require over 4.5 h to process 15 million base pairs (bps) whereas a properly designed one could perform the same task in less than five minutes. In the best case, a GPU implementation can yield these results in 57 s. The present work shows how parallelism can be used in MATLAB for gene prediction in very large DNA sequences to produce results that are over 270 times faster than a conventional approach. This is significant as MATLAB is typically overlooked due to its apparent slow processing time even though it offers a convenient environment for bioinformatics. From a practical standpoint, this work proposes two strategies for accelerating genome data processing which rely on different parallelization mechanisms. Using a CPU, the work shows that direct access to the MEX function increases execution speed and that the PARFOR construct should be used in order to take full advantage of the parallelizable Goertzel implementation. When the target is a GPU, the work shows that data needs to be segmented into manageable sizes within the GFOR construct before processing in order to minimize execution time.

5. Based on matlab 3d visualization programming in the application of the uranium exploration

International Nuclear Information System (INIS)

Qi Jianquan

2012-01-01

Combined geological theory, geophysical curve and Matlab programming three dimensional visualization applied to the production of uranium exploration. With a simple Matlab programming, numerical processing and graphical visualization of convenient features, and effective in identifying ore bodies, recourse to ore, ore body delineation of the scope of analysis has played the role of sedimentary environment. (author)

6. Causes of maternal mortality decline in Matlab, Bangladesh.

Science.gov (United States)

Chowdhury, Mahbub Elahi; Ahmed, Anisuddin; Kalim, Nahid; Koblinsky, Marge

2009-04-01

Bangladesh is distinct among developing countries in achieving a low maternal mortality ratio (MMR) of 322 per 100,000 livebirths despite the very low use of skilled care at delivery (13% nationally). This variation has also been observed in Matlab, a rural area in Bangladesh, where longitudinal data on maternal mortality are available since the mid-1970s. The current study investigated the possible causes of the maternal mortality decline in Matlab. The study analyzed 769 maternal deaths and 215,779 pregnancy records from the Health and Demographic Surveillance System (HDSS) and other sources of safe motherhood data in the ICDDR,B and government service areas in Matlab during 1976-2005. The major interventions that took place in both the areas since the early 1980s were the family-planning programme plus safe menstrual regulation services and safe motherhood interventions (midwives for normal delivery in the ICDDR,B service area from the late 1980s and equal access to comprehensive emergency obstetric care [EmOC] in public facilities for women from both the areas). National programmes for social development and empowerment of women through education and microcredit programmes were implemented in both the areas. The quantitative findings were supplemented by a qualitative study by interviewing local community care providers for their change in practices for maternal healthcare over time. After the introduction of the safe motherhood programme, reduction in maternal mortality was higher in the ICDDR,B service area (68.6%) than in the government service area (50.4%) during 1986-1989 and 2001-2005. Reduction in the number of maternal deaths due to the fertility decline was higher in the government service area (30%) than in the ICDDR,B service area (23%) during 1979-2005. In each area, there has been substantial reduction in abortion-related mortality--86.7% and 78.3%--in the ICDDR,B and government service areas respectively. Education of women was a strong predictor

7. Faults Detection in a Photovoltaic Generator by Using Matlab Simulink and the chipKIT Max32 Board

Directory of Open Access Journals (Sweden)

2014-01-01

Full Text Available This paper presents a laboratory with equipment and an algorithm for teaching graduate students the monitoring and the diagnosis of PV arrays. The contribution is the presentation of an algorithm to detect and localize the fault, in photovoltaic generator when a limited number of voltage sensors are used. An I-V curve tracer using a capacitive load is exploited to measure the I-V characteristics of PV arrays. Such measurement allows characterization of PV arrays on-site, under real operating conditions, and provides also information for the detection of potential array anomalies. This I-V curve tracer is based on a microcontroller board family called chipKIT Max32 which is a popular platform for physical computing. A user program can be developed visually on a PC side via the graphical user interface (GUI in Matlab Simulink, where the chipKIT Max32 of Digilent which is a low-cost board is designed for use with the Arduinompid software. The obtained results from the partial shade default showed the effectiveness of the proposed diagnosis method and the good functioning of this board with the Matlab/Simulink environment.

8. Efficient Parallel Kernel Solvers for Computational Fluid Dynamics Applications

Science.gov (United States)

Sun, Xian-He

1997-01-01

Distributed-memory parallel computers dominate today's parallel computing arena. These machines, such as Intel Paragon, IBM SP2, and Cray Origin2OO, have successfully delivered high performance computing power for solving some of the so-called "grand-challenge" problems. Despite initial success, parallel machines have not been widely accepted in production engineering environments due to the complexity of parallel programming. On a parallel computing system, a task has to be partitioned and distributed appropriately among processors to reduce communication cost and to attain load balance. More importantly, even with careful partitioning and mapping, the performance of an algorithm may still be unsatisfactory, since conventional sequential algorithms may be serial in nature and may not be implemented efficiently on parallel machines. In many cases, new algorithms have to be introduced to increase parallel performance. In order to achieve optimal performance, in addition to partitioning and mapping, a careful performance study should be conducted for a given application to find a good algorithm-machine combination. This process, however, is usually painful and elusive. The goal of this project is to design and develop efficient parallel algorithms for highly accurate Computational Fluid Dynamics (CFD) simulations and other engineering applications. The work plan is 1) developing highly accurate parallel numerical algorithms, 2) conduct preliminary testing to verify the effectiveness and potential of these algorithms, 3) incorporate newly developed algorithms into actual simulation packages. The work plan has well achieved. Two highly accurate, efficient Poisson solvers have been developed and tested based on two different approaches: (1) Adopting a mathematical geometry which has a better capacity to describe the fluid, (2) Using compact scheme to gain high order accuracy in numerical discretization. The previously developed Parallel Diagonal Dominant (PDD) algorithm

9. Simulaser, a graphical laser simulator based on Matlab Simulink

CSIR Research Space (South Africa)

Jacobs, Cobus

2016-07-01

Full Text Available We present a single-element plane-wave laser rate equation model and its implementation as a graphical laser simulation library using Matlab Simulink. Simulink’s graphical interface and vector capabilities provide a unique layer of abstraction...

10. The NNSYSID Toolbox - A MATLAB Toolbox for System Identification with Neural Networks

DEFF Research Database (Denmark)

Nørgård, Peter Magnus; Ravn, Ole; Hansen, Lars Kai

1996-01-01

To assist the identification of nonlinear dynamic systems, a set of tools has been developed for the MATLAB(R) environment. The tools include a number of different model structures, highly effective training algorithms, functions for validating trained networks, and pruning algorithms for determi......To assist the identification of nonlinear dynamic systems, a set of tools has been developed for the MATLAB(R) environment. The tools include a number of different model structures, highly effective training algorithms, functions for validating trained networks, and pruning algorithms...

11. Dimensioning storage and computing clusters for efficient High Throughput Computing

CERN Multimedia

CERN. Geneva

2012-01-01

Scientific experiments are producing huge amounts of data, and they continue increasing the size of their datasets and the total volume of data. These data are then processed by researchers belonging to large scientific collaborations, with the Large Hadron Collider being a good example. The focal point of Scientific Data Centres has shifted from coping efficiently with PetaByte scale storage to deliver quality data processing throughput. The dimensioning of the internal components in High Throughput Computing (HTC) data centers is of crucial importance to cope with all the activities demanded by the experiments, both the online (data acceptance) and the offline (data processing, simulation and user analysis). This requires a precise setup involving disk and tape storage services, a computing cluster and the internal networking to prevent bottlenecks, overloads and undesired slowness that lead to losses cpu cycles and batch jobs failures. In this paper we point out relevant features for running a successful s...

12. Dimensioning storage and computing clusters for efficient high throughput computing

International Nuclear Information System (INIS)

Accion, E; Bria, A; Bernabeu, G; Caubet, M; Delfino, M; Espinal, X; Merino, G; Lopez, F; Martinez, F; Planas, E

2012-01-01

Scientific experiments are producing huge amounts of data, and the size of their datasets and total volume of data continues increasing. These data are then processed by researchers belonging to large scientific collaborations, with the Large Hadron Collider being a good example. The focal point of scientific data centers has shifted from efficiently coping with PetaByte scale storage to deliver quality data processing throughput. The dimensioning of the internal components in High Throughput Computing (HTC) data centers is of crucial importance to cope with all the activities demanded by the experiments, both the online (data acceptance) and the offline (data processing, simulation and user analysis). This requires a precise setup involving disk and tape storage services, a computing cluster and the internal networking to prevent bottlenecks, overloads and undesired slowness that lead to losses cpu cycles and batch jobs failures. In this paper we point out relevant features for running a successful data storage and processing service in an intensive HTC environment.

13. AIR Tools - A MATLAB package of algebraic iterative reconstruction methods

DEFF Research Database (Denmark)

Hansen, Per Christian; Saxild-Hansen, Maria

2012-01-01

We present a MATLAB package with implementations of several algebraic iterative reconstruction methods for discretizations of inverse problems. These so-called row action methods rely on semi-convergence for achieving the necessary regularization of the problem. Two classes of methods are impleme......We present a MATLAB package with implementations of several algebraic iterative reconstruction methods for discretizations of inverse problems. These so-called row action methods rely on semi-convergence for achieving the necessary regularization of the problem. Two classes of methods...... are implemented: Algebraic Reconstruction Techniques (ART) and Simultaneous Iterative Reconstruction Techniques (SIRT). In addition we provide a few simplified test problems from medical and seismic tomography. For each iterative method, a number of strategies are available for choosing the relaxation parameter...

14. An Efficient Biometric-Based Algorithm Using Heart Rate Variability for Securing Body Sensor Networks.

Science.gov (United States)

Pirbhulal, Sandeep; Zhang, Heye; Mukhopadhyay, Subhas Chandra; Li, Chunyue; Wang, Yumei; Li, Guanglin; Wu, Wanqing; Zhang, Yuan-Ting

2015-06-26

Body Sensor Network (BSN) is a network of several associated sensor nodes on, inside or around the human body to monitor vital signals, such as, Electroencephalogram (EEG), Photoplethysmography (PPG), Electrocardiogram (ECG), etc. Each sensor node in BSN delivers major information; therefore, it is very significant to provide data confidentiality and security. All existing approaches to secure BSN are based on complex cryptographic key generation procedures, which not only demands high resource utilization and computation time, but also consumes large amount of energy, power and memory during data transmission. However, it is indispensable to put forward energy efficient and computationally less complex authentication technique for BSN. In this paper, a novel biometric-based algorithm is proposed, which utilizes Heart Rate Variability (HRV) for simple key generation process to secure BSN. Our proposed algorithm is compared with three data authentication techniques, namely Physiological Signal based Key Agreement (PSKA), Data Encryption Standard (DES) and Rivest Shamir Adleman (RSA). Simulation is performed in Matlab and results suggest that proposed algorithm is quite efficient in terms of transmission time utilization, average remaining energy and total power consumption.

15. A New Language Design for Prototyping Numerical Computation

Directory of Open Access Journals (Sweden)

Thomas Derby

1996-01-01

Full Text Available To naturally and conveniently express numerical algorithms, considerable expressive power is needed in the languages in which they are implemented. The language Matlab is widely used by numerical analysts for this reason. Expressiveness or ease-of-use can also result in a loss of efficiency, as is the case with Matlab. In particular, because numerical analysts are highly interested in the performance of their algorithms, prototypes are still often implemented in languages such as Fortran. In this article we describe a language design that is intended to both provide expressiveness for numerical computation, and at the same time provide performance guarantees. In our language, EQ, we attempt to include both syntactic and semantic features that correspond closely to the programmer's model of the problem, including unordered equations, large-granularity state transitions, and matrix notation. The resulting language does not fit into standard language categories such as functional or imperative but has features of both paradigms. We also introduce the notion of language dependability, which is the idea that a language should guarantee that certain program transformations are performed by all implementations. We first describe the interesting features of EQ, and then present three examples of algorithms written using it. We also provide encouraging performance results from an initial implementation of our language.

16. An Open-source Toolbox for Analysing and Processing PhysioNet Databases in MATLAB and Octave

Directory of Open Access Journals (Sweden)

Ikaro Silva

2014-09-01

Full Text Available The WaveForm DataBase (WFDB Toolbox for MATLAB/Octave enables  integrated access to PhysioNet's software and databases. Using the WFDB Toolbox for MATLAB/Octave, users have access to over 50 physiological databases in PhysioNet. The toolbox allows direct loading into MATLAB/Octave's workspace of over 4 TB of biomedical signals including ECG, EEG, EMG, and PLETH. Additionally, most signals are accompanied by meta data such as medical annotations of clinical events: arrhythmias, sleep stages, seizures, hypotensive episodes, etc. Users of this toolbox should easily be able to reproduce, validate, and compare results published based on PhysioNet's software and databases.

17. Optimization of CCGT power plant and performance analysis using MATLAB/Simulink with actual operational data.

Science.gov (United States)

Hasan, Naimul; Rai, Jitendra Nath; Arora, Bharat Bhushan

2014-01-01

In the Modern scenario, the naturally available resources for power generation are being depleted at an alarming rate; firstly due to wastage of power at consumer end, secondly due to inefficiency of various power system components. A Combined Cycle Gas Turbine (CCGT) integrates two cycles- Brayton cycle (Gas Turbine) and Rankine cycle (Steam Turbine) with the objective of increasing overall plant efficiency. This is accomplished by utilising the exhaust of Gas Turbine through a waste-heat recovery boiler to run a Steam Turbine. The efficiency of a gas turbine which ranges from 28% to 33% can hence be raised to about 60% by recovering some of the low grade thermal energy from the exhaust gas for steam turbine process. This paper is a study for the modelling of CCGT and comparing it with actual operational data. The performance model for CCGT plant was developed in MATLAB/Simulink.

18. Efficient Backprojection-Based Synthetic Aperture Radar Computation with Many-Core Processors

Directory of Open Access Journals (Sweden)

Jongsoo Park

2013-01-01

Full Text Available Tackling computationally challenging problems with high efficiency often requires the combination of algorithmic innovation, advanced architecture, and thorough exploitation of parallelism. We demonstrate this synergy through synthetic aperture radar (SAR via backprojection, an image reconstruction method that can require hundreds of TFLOPS. Computation cost is significantly reduced by our new algorithm of approximate strength reduction; data movement cost is economized by software locality optimizations facilitated by advanced architecture support; parallelism is fully harnessed in various patterns and granularities. We deliver over 35 billion backprojections per second throughput per compute node on an Intel® Xeon® processor E5-2670-based cluster, equipped with Intel® Xeon Phi™ coprocessors. This corresponds to processing a 3K×3K image within a second using a single node. Our study can be extended to other settings: backprojection is applicable elsewhere including medical imaging, approximate strength reduction is a general code transformation technique, and many-core processors are emerging as a solution to energy-efficient computing.

19. Integración del brazo robot IRB120 en entorno ROS-MATLAB

OpenAIRE

2017-01-01

Este proyecto usa el entorno ROS (Robot Operating System) para desarrollar el control del brazo robot IRB 120 y su implementación en el entorno de trabajo MATLAB. Se explicará la creación del modelo del robot, la planificación de trayectorias y la comunicación con dicho robot. This project uses the ROS (Robot Operating System) environment for developing the control of the IRB 120 robotic arm and its implementation in the MATLAB working environment. It will explain the creation of the...

20. The Efficient Use of Vector Computers with Emphasis on Computational Fluid Dynamics : a GAMM-Workshop

CERN Document Server

Gentzsch, Wolfgang

1986-01-01

The GAMM Committee for Numerical Methods in Fluid Mechanics organizes workshops which should bring together experts of a narrow field of computational fluid dynamics (CFD) to exchange ideas and experiences in order to speed-up the development in this field. In this sense it was suggested that a workshop should treat the solution of CFD problems on vector computers. Thus we organized a workshop with the title "The efficient use of vector computers with emphasis on computational fluid dynamics". The workshop took place at the Computing Centre of the University of Karlsruhe, March 13-15,1985. The participation had been restricted to 22 people of 7 countries. 18 papers have been presented. In the announcement of the workshop we wrote: "Fluid mechanics has actively stimulated the development of superfast vector computers like the CRAY's or CYBER 205. Now these computers on their turn stimulate the development of new algorithms which result in a high degree of vectorization (sca1ar/vectorized execution-time). But w...

1. MASCOT - MATLAB Stability and Control Toolbox

Science.gov (United States)

Kenny, Sean; Crespo, Luis

2011-01-01

MASCOT software was created to provide the conceptual aircraft designer accurate predictions of air vehicle stability and control characteristics. The code takes as input mass property data in the form of an inertia tensor, aerodynamic loading data, and propulsion (i.e. thrust) loading data. Using fundamental non-linear equations of motion, MASCOT then calculates vehicle trim and static stability data for any desired flight condition. Common predefined flight conditions are included. The predefined flight conditions include six horizontal and six landing rotation conditions with varying options for engine out, crosswind and sideslip, plus three takeoff rotation conditions. Results are displayed through a unique graphical interface developed to provide stability and control information to the conceptual design engineers using a qualitative scale indicating whether the vehicle has acceptable, marginal, or unacceptable static stability characteristics. This software allows the user to prescribe the vehicle s CG location, mass, and inertia tensor so that any loading configuration between empty weight and maximum take-off weight can be analyzed. The required geometric and aerodynamic data as well as mass and inertia properties may be entered directly, passed through data files, or come from external programs such as Vehicle Sketch Pad (VSP). The current version of MASCOT has been tested with VSP used to compute the required data, which is then passed directly into the program. In VSP, the vehicle geometry is created and manipulated. The aerodynamic coefficients, stability and control derivatives, are calculated using VorLax, which is now available directly within VSP. MASCOT has been written exclusively using the technical computing language MATLAB . This innovation is able to bridge the gap between low-fidelity conceptual design and higher-fidelity stability and control analysis. This new tool enables the conceptual design engineer to include detailed static stability

2. The Matlab Radial Basis Function Toolbox

Directory of Open Access Journals (Sweden)

Scott A. Sarra

2017-03-01

Full Text Available Radial Basis Function (RBF methods are important tools for scattered data interpolation and for the solution of Partial Differential Equations in complexly shaped domains. The most straight forward approach used to evaluate the methods involves solving a linear system which is typically poorly conditioned. The Matlab Radial Basis Function toolbox features a regularization method for the ill-conditioned system, extended precision floating point arithmetic, and symmetry exploitation for the purpose of reducing flop counts of the associated numerical linear algebra algorithms.

3. Signals and systems primer with Matlab

CERN Document Server

Poularikas, Alexander D

2006-01-01

Signals and Systems Primer with MATLAB® equally emphasizes the fundamentals of both analog and digital signals and systems. To ensure insight into the basic concepts and methods, the text presents a variety of examples that illustrate a wide range of applications, from microelectromechanical to worldwide communication systems. It also provides MATLAB functions and procedures for practice and verification of these concepts.Taking a pedagogical approach, the author builds a solid foundation in signal processing as well as analog and digital systems. The book first introduces orthogonal signals,

4. Implementation and Comparison of the Lifting 5/3 and 9/7 Algorithms in MatLab on GPU

Directory of Open Access Journals (Sweden)

Randa Khemiri

2016-06-01

Full Text Available In order to accelerate the Discrete Wavelet Transform DWT, we have implemented and compared the lifting "Le Gall5/3" and "Cohen-Daubechies-Feauveau9/7" (CDF9/7 algorithms on a low cost NVIDIA’s GPU. The suggested implementation is realized in MatLab using the in-house parallel computation toolbox (PCT. Our experimental results indicate, that the speedup is proportional to the image size until it attains a maximum at 20482 pixels, beyond these values the curve decreases. The performance with GPU enhances above a factor of 2~3 compared with CPU.

5. RARtool: A MATLAB Software Package for Designing Response-Adaptive Randomized Clinical Trials with Time-to-Event Outcomes.

Science.gov (United States)

Ryeznik, Yevgen; Sverdlov, Oleksandr; Wong, Weng Kee

2015-08-01

Response-adaptive randomization designs are becoming increasingly popular in clinical trial practice. In this paper, we present RARtool , a user interface software developed in MATLAB for designing response-adaptive randomized comparative clinical trials with censored time-to-event outcomes. The RARtool software can compute different types of optimal treatment allocation designs, and it can simulate response-adaptive randomization procedures targeting selected optimal allocations. Through simulations, an investigator can assess design characteristics under a variety of experimental scenarios and select the best procedure for practical implementation. We illustrate the utility of our RARtool software by redesigning a survival trial from the literature.

6. Matlab as a robust control design tool

Science.gov (United States)

Gregory, Irene M.

1994-01-01

This presentation introduces Matlab as a tool used in flight control research. The example used to illustrate some of the capabilities of this software is a robust controller designed for a single stage to orbit air breathing vehicles's ascent to orbit. The global requirements of the controller are to stabilize the vehicle and follow a trajectory in the presence of atmospheric disturbances and strong dynamic coupling between airframe and propulsion.

7. Performance Evaluation of a Mobile Wireless Computational Grid ...

African Journals Online (AJOL)

PROF. OLIVER OSUAGWA

2015-12-01

Dec 1, 2015 ... Abstract. This work developed and simulated a mathematical model for a mobile wireless computational Grid ... which mobile modes will process the tasks .... evaluation are analytical modelling, simulation ... MATLAB 7.10.0.

8. Pemrograman Graphical User Interface (GUI) Dengan Matlab Untuk Mendesain Alat Bantu Opersai Matematika

OpenAIRE

Butar Butar, Ronisah Putra

2011-01-01

Graphical User Interface ( GUI) is a application program orient visual which woke up with graphical obyek in the place of comand of text for the user interaction. Graphical User Interface ( GUI) in MATLAB embraced in a application of GUIDE ( Graphical User Interface Builder). In this paper will be discuss about how disagning a appliance assist mathematics operation with program of Graphical User Interface ( GUI) with MATLAB with aim to as one of the appliance alternative assist...

9. Unified commutation-pruning technique for efficient computation of composite DFTs

Science.gov (United States)

Castro-Palazuelos, David E.; Medina-Melendrez, Modesto Gpe.; Torres-Roman, Deni L.; Shkvarko, Yuriy V.

2015-12-01

An efficient computation of a composite length discrete Fourier transform (DFT), as well as a fast Fourier transform (FFT) of both time and space data sequences in uncertain (non-sparse or sparse) computational scenarios, requires specific processing algorithms. Traditional algorithms typically employ some pruning methods without any commutations, which prevents them from attaining the potential computational efficiency. In this paper, we propose an alternative unified approach with automatic commutations between three computational modalities aimed at efficient computations of the pruned DFTs adapted for variable composite lengths of the non-sparse input-output data. The first modality is an implementation of the direct computation of a composite length DFT, the second one employs the second-order recursive filtering method, and the third one performs the new pruned decomposed transform. The pruned decomposed transform algorithm performs the decimation in time or space (DIT) data acquisition domain and, then, decimation in frequency (DIF). The unified combination of these three algorithms is addressed as the DFTCOMM technique. Based on the treatment of the combinational-type hypotheses testing optimization problem of preferable allocations between all feasible commuting-pruning modalities, we have found the global optimal solution to the pruning problem that always requires a fewer or, at most, the same number of arithmetic operations than other feasible modalities. The DFTCOMM method outperforms the existing competing pruning techniques in the sense of attainable savings in the number of required arithmetic operations. It requires fewer or at most the same number of arithmetic operations for its execution than any other of the competing pruning methods reported in the literature. Finally, we provide the comparison of the DFTCOMM with the recently developed sparse fast Fourier transform (SFFT) algorithmic family. We feature that, in the sensing scenarios with

10. A platform for dynamic simulation and control of movement based on OpenSim and MATLAB.

Science.gov (United States)

Mansouri, Misagh; Reinbolt, Jeffrey A

2012-05-11

Numerical simulations play an important role in solving complex engineering problems and have the potential to revolutionize medical decision making and treatment strategies. In this paper, we combine the rapid model-based design, control systems and powerful numerical method strengths of MATLAB/Simulink with the simulation and human movement dynamics strengths of OpenSim by developing a new interface between the two software tools. OpenSim is integrated with Simulink using the MATLAB S-function mechanism, and the interface is demonstrated using both open-loop and closed-loop control systems. While the open-loop system uses MATLAB/Simulink to separately reproduce the OpenSim Forward Dynamics Tool, the closed-loop system adds the unique feature of feedback control to OpenSim, which is necessary for most human movement simulations. An arm model example was successfully used in both open-loop and closed-loop cases. For the open-loop case, the simulation reproduced results from the OpenSim Forward Dynamics Tool with root mean square (RMS) differences of 0.03° for the shoulder elevation angle and 0.06° for the elbow flexion angle. MATLAB's variable step-size integrator reduced the time required to generate the forward dynamic simulation from 7.1s (OpenSim) to 2.9s (MATLAB). For the closed-loop case, a proportional-integral-derivative controller was used to successfully balance a pole on model's hand despite random force disturbances on the pole. The new interface presented here not only integrates the OpenSim and MATLAB/Simulink software tools, but also will allow neuroscientists, physiologists, biomechanists, and physical therapists to adapt and generate new solutions as treatments for musculoskeletal conditions. Copyright © 2012 Elsevier Ltd. All rights reserved.

11. MATLAB simulation software used for the PhD thesis "Acquisition of Multi-Band Signals via Compressed Sensing

DEFF Research Database (Denmark)

2014-01-01

MATLAB simulation software used for the PhD thesis "Acquisition of Multi-Band Signals via Compressed Sensing......MATLAB simulation software used for the PhD thesis "Acquisition of Multi-Band Signals via Compressed Sensing...

12. Visualization problems in conductor thermal aging resp. comparison of matlab and gnuplot graphical outputs

International Nuclear Information System (INIS)

Beza, J.; Heckenbergerova, J.

2012-01-01

The main aim of this paper is comparison of Matlab and Gnuplot software suitability for visualization of results in electro energetic and electro engineering domain. Whole contribution is targeted on specific graphical outputs in problematic of thermal aging of overhead power transmission lines. First, all graphical outputs determined for comparison are visualized in Matlab and furthermore strengths and disadvantages of this implementation are described. Same graphics are then created by free software Gnuplot and finally comparison of both visualization software is made. Last part of the contribution contains main rules and tips about Gnuplot visualization and can be used as User Handbook. The major target of this contribution is to show advantages and shortcomings of Matlab graphical outputs together with introduction of Gnuplot software and suitable alternative for visualization of electrotechnical results. (Authors)

13. Development of MATLAB software to control data acquisition from a multichannel systems multi-electrode array.

Science.gov (United States)

Messier, Erik

2016-08-01

A Multichannel Systems (MCS) microelectrode array data acquisition (DAQ) unit is used to collect multichannel electrograms (EGM) from a Langendorff perfused rabbit heart system to study sudden cardiac death (SCD). MCS provides software through which data being processed by the DAQ unit can be displayed and saved, but this software's combined utility with MATLAB is not very effective. MCSs software stores recorded EGM data in a MathCad (MCD) format, which is then converted to a text file format. These text files are very large, and it is therefore very time consuming to import the EGM data into MATLAB for real-time analysis. Therefore, customized MATLAB software was developed to control the acquisition of data from the MCS DAQ unit, and provide specific laboratory accommodations for this study of SCD. The developed DAQ unit control software will be able to accurately: provide real time display of EGM signals; record and save EGM signals in MATLAB in a desired format; and produce real time analysis of the EGM signals; all through an intuitive GUI.

14. MATtrack: A MATLAB-Based Quantitative Image Analysis Platform for Investigating Real-Time Photo-Converted Fluorescent Signals in Live Cells.

Science.gov (United States)

Courtney, Jane; Woods, Elena; Scholz, Dimitri; Hall, William W; Gautier, Virginie W

2015-01-01

We introduce here MATtrack, an open source MATLAB-based computational platform developed to process multi-Tiff files produced by a photo-conversion time lapse protocol for live cell fluorescent microscopy. MATtrack automatically performs a series of steps required for image processing, including extraction and import of numerical values from Multi-Tiff files, red/green image classification using gating parameters, noise filtering, background extraction, contrast stretching and temporal smoothing. MATtrack also integrates a series of algorithms for quantitative image analysis enabling the construction of mean and standard deviation images, clustering and classification of subcellular regions and injection point approximation. In addition, MATtrack features a simple user interface, which enables monitoring of Fluorescent Signal Intensity in multiple Regions of Interest, over time. The latter encapsulates a region growing method to automatically delineate the contours of Regions of Interest selected by the user, and performs background and regional Average Fluorescence Tracking, and automatic plotting. Finally, MATtrack computes convenient visualization and exploration tools including a migration map, which provides an overview of the protein intracellular trajectories and accumulation areas. In conclusion, MATtrack is an open source MATLAB-based software package tailored to facilitate the analysis and visualization of large data files derived from real-time live cell fluorescent microscopy using photoconvertible proteins. It is flexible, user friendly, compatible with Windows, Mac, and Linux, and a wide range of data acquisition software. MATtrack is freely available for download at eleceng.dit.ie/courtney/MATtrack.zip.

15. Efficient O(N) recursive computation of the operational space inertial matrix

International Nuclear Information System (INIS)

Lilly, K.W.; Orin, D.E.

1993-01-01

The operational space inertia matrix Λ reflects the dynamic properties of a robot manipulator to its tip. In the control domain, it may be used to decouple force and/or motion control about the manipulator workspace axes. The matrix Λ also plays an important role in the development of efficient algorithms for the dynamic simulation of closed-chain robotic mechanisms, including simple closed-chain mechanisms such as multiple manipulator systems and walking machines. The traditional approach used to compute Λ has a computational complexity of O(N 3 ) for an N degree-of-freedom manipulator. This paper presents the development of a recursive algorithm for computing the operational space inertia matrix (OSIM) that reduces the computational complexity to O(N). This algorithm, the inertia propagation method, is based on a single recursion that begins at the base of the manipulator and progresses out to the last link. Also applicable to redundant systems and mechanisms with multiple-degree-of-freedom joints, the inertia propagation method is the most efficient method known for computing Λ for N ≥ 6. The numerical accuracy of the algorithm is discussed for a PUMA 560 robot with a fixed base

16. Some computational challenges of developing efficient parallel algorithms for data-dependent computations in thermal-hydraulics supercomputer applications

International Nuclear Information System (INIS)

Woodruff, S.B.

1994-01-01

The Transient Reactor Analysis Code (TRAC), which features a two-fluid treatment of thermal-hydraulics, is designed to model transients in water reactors and related facilities. One of the major computational costs associated with TRAC and similar codes is calculating constitutive coefficients. Although the formulations for these coefficients are local, the costs are flow-regime- or data-dependent; i.e., the computations needed for a given spatial node often vary widely as a function of time. Consequently, a fixed, uniform assignment of nodes to prallel processors will result in degraded computational efficiency due to the poor load balancing. A standard method for treating data-dependent models on vector architectures has been to use gather operations (or indirect adressing) to sort the nodes into subsets that (temporarily) share a common computational model. However, this method is not effective on distributed memory data parallel architectures, where indirect adressing involves expensive communication overhead. Another serious problem with this method involves software engineering challenges in the areas of maintainability and extensibility. For example, an implementation that was hand-tuned to achieve good computational efficiency would have to be rewritten whenever the decision tree governing the sorting was modified. Using an example based on the calculation of the wall-to-liquid and wall-to-vapor heat-transfer coefficients for three nonboiling flow regimes, we describe how the use of the Fortran 90 WHERE construct and automatic inlining of functions can be used to ameliorate this problem while improving both efficiency and software engineering. Unfortunately, a general automatic solution to the load-balancing problem associated with data-dependent computations is not yet available for massively parallel architectures. We discuss why developers should either wait for such solutions or consider alternative numerical algorithms, such as a neural network

17. A computationally efficient OMP-based compressed sensing reconstruction for dynamic MRI

International Nuclear Information System (INIS)

Usman, M; Prieto, C; Schaeffter, T; Batchelor, P G; Odille, F; Atkinson, D

2011-01-01

Compressed sensing (CS) methods in MRI are computationally intensive. Thus, designing novel CS algorithms that can perform faster reconstructions is crucial for everyday applications. We propose a computationally efficient orthogonal matching pursuit (OMP)-based reconstruction, specifically suited to cardiac MR data. According to the energy distribution of a y-f space obtained from a sliding window reconstruction, we label the y-f space as static or dynamic. For static y-f space images, a computationally efficient masked OMP reconstruction is performed, whereas for dynamic y-f space images, standard OMP reconstruction is used. The proposed method was tested on a dynamic numerical phantom and two cardiac MR datasets. Depending on the field of view composition of the imaging data, compared to the standard OMP method, reconstruction speedup factors ranging from 1.5 to 2.5 are achieved. (note)

18. On the Computation of the Efficient Frontier of the Portfolio Selection Problem

Directory of Open Access Journals (Sweden)

Clara Calvo

2012-01-01

Full Text Available An easy-to-use procedure is presented for improving the ε-constraint method for computing the efficient frontier of the portfolio selection problem endowed with additional cardinality and semicontinuous variable constraints. The proposed method provides not only a numerical plotting of the frontier but also an analytical description of it, including the explicit equations of the arcs of parabola it comprises and the change points between them. This information is useful for performing a sensitivity analysis as well as for providing additional criteria to the investor in order to select an efficient portfolio. Computational results are provided to test the efficiency of the algorithm and to illustrate its applications. The procedure has been implemented in Mathematica.

19. PETRI NET MODELING OF COMPUTER VIRUS LIFE CYCLE

African Journals Online (AJOL)

Dr Obe

dynamic system analysis is applied to model the virus life cycle. Simulation of the derived model ... Keywords: Virus lifecycle, Petri nets, modeling. simulation. .... complex process. Figure 2 .... by creating Matlab files for five different computer ...

20. Online design of Matlab/Simulink block schemes

Directory of Open Access Journals (Sweden)

Zoltán Janík

2011-04-01

Full Text Available The paper presents a new online tool that enables to build a Matlab/Simulink block scheme in the Internet environment. The block scheme can be designed in similar manner as it is offered by local installation of Simulink. The application was created by widely used technologies as XHTML, CSS, JavaScript, PHP together with AJAX approach. The created application can be used as a supporting tool in virtual and remote laboratories.

1. An efficient algorithm for nucleolus and prekernel computation in some classes of TU-games

NARCIS (Netherlands)

Faigle, U.; Kern, Walter; Kuipers, J.

1998-01-01

We consider classes of TU-games. We show that we can efficiently compute an allocation in the intersection of the prekernel and the least core of the game if we can efficiently compute the minimum excess for any given allocation. In the case where the prekernel of the game contains exactly one core

2. Analysis of the MPEG-1 Layer III (MP3) Algorithm using MATLAB

CERN Document Server

Thiagarajan, Jayaraman

2011-01-01

The MPEG-1 Layer III (MP3) algorithm is one of the most successful audio formats for consumer audio storage and for transfer and playback of music on digital audio players. The MP3 compression standard along with the AAC (Advanced Audio Coding) algorithm are associated with the most successful music players of the last decade. This book describes the fundamentals and the MATLAB implementation details of the MP3 algorithm. Several of the tedious processes in MP3 are supported by demonstrations using MATLAB software. The book presents the theoretical concepts and algorithms used in the MP3 stand

3. First experience with the MATLAB Middle Layer at ANKA

International Nuclear Information System (INIS)

Marsching, S.; Huttel, E.; Klein, M.; Mueller, A.S.; Smale, N.J.

2012-01-01

ANKA is a synchrotron radiation facility at the Karlsruhe Institute of Technology. The MATLAB Middle Layer (MML) is a collection of scripts for the MATLAB programming environment, designed to control and measure parameters of an accelerator. MML has been adapted for use at ANKA and the commissioning process was quite simple and would have been even simpler if we had used one of the control systems directly supported by MML. At ANKA MML is used for accelerator physics studies and regular tasks like beam-based alignment and response matrix analysis using LOCO. Furthermore, we intend to study the MML as default orbit correction tool for user operation. We report on the experience made during the commissioning process and present the latest results obtained while using the MML for machine studies. MML simplifies the task of performing a beam-based alignment dramatically compared to our old solution which required the user to copy the measured data into specific files for further evaluation

4. Octopus: embracing the energy efficiency of handheld multimedia computers

NARCIS (Netherlands)

Havinga, Paul J.M.; Smit, Gerardus Johannes Maria

1999-01-01

In the MOBY DICK project we develop and define the architecture of a new generation of mobile hand-held computers called Mobile Digital Companions. The Companions must meet several major requirements: high performance, energy efficient, a notion of Quality of Service (QoS), small size, and low

5. Towards the Automatic Detection of Efficient Computing Assets in a Heterogeneous Cloud Environment

OpenAIRE

Iglesias, Jesus Omana; Stokes, Nicola; Ventresque, Anthony; Murphy, Liam, B.E.; Thorburn, James

2013-01-01

peer-reviewed In a heterogeneous cloud environment, the manual grading of computing assets is the first step in the process of configuring IT infrastructures to ensure optimal utilization of resources. Grading the efficiency of computing assets is however, a difficult, subjective and time consuming manual task. Thus, an automatic efficiency grading algorithm is highly desirable. In this paper, we compare the effectiveness of the different criteria used in the manual gr...

6. MATLAB tools for improved characterization and quantification of volcanic incandescence in Webcam imagery; applications at Kilauea Volcano, Hawai'i

Science.gov (United States)

Patrick, Matthew R.; Kauahikaua, James P.; Antolik, Loren

2010-01-01

Webcams are now standard tools for volcano monitoring and are used at observatories in Alaska, the Cascades, Kamchatka, Hawai'i, Italy, and Japan, among other locations. Webcam images allow invaluable documentation of activity and provide a powerful comparative tool for interpreting other monitoring datastreams, such as seismicity and deformation. Automated image processing can improve the time efficiency and rigor of Webcam image interpretation, and potentially extract more information on eruptive activity. For instance, Lovick and others (2008) provided a suite of processing tools that performed such tasks as noise reduction, eliminating uninteresting images from an image collection, and detecting incandescence, with an application to dome activity at Mount St. Helens during 2007. In this paper, we present two very simple automated approaches for improved characterization and quantification of volcanic incandescence in Webcam images at Kilauea Volcano, Hawaii. The techniques are implemented in MATLAB (version 2009b, Copyright: The Mathworks, Inc.) to take advantage of the ease of matrix operations. Incandescence is a useful indictor of the location and extent of active lava flows and also a potentially powerful proxy for activity levels at open vents. We apply our techniques to a period covering both summit and east rift zone activity at Kilauea during 2008?2009 and compare the results to complementary datasets (seismicity, tilt) to demonstrate their integrative potential. A great strength of this study is the demonstrated success of these tools in an operational setting at the Hawaiian Volcano Observatory (HVO) over the course of more than a year. Although applied only to Webcam images here, the techniques could be applied to any type of sequential images, such as time-lapse photography. We expect that these tools are applicable to many other volcano monitoring scenarios, and the two MATLAB scripts, as they are implemented at HVO, are included in the appendixes

7. Structured Parallel Programming Patterns for Efficient Computation

CERN Document Server

McCool, Michael; Robison, Arch

2012-01-01

Programming is now parallel programming. Much as structured programming revolutionized traditional serial programming decades ago, a new kind of structured programming, based on patterns, is relevant to parallel programming today. Parallel computing experts and industry insiders Michael McCool, Arch Robison, and James Reinders describe how to design and implement maintainable and efficient parallel algorithms using a pattern-based approach. They present both theory and practice, and give detailed concrete examples using multiple programming models. Examples are primarily given using two of th

8. Energy Efficiency in Computing (2/2)

CERN Multimedia

CERN. Geneva

2016-01-01

We will start the second day of our energy efficient computing series with a brief discussion of software and the impact it has on energy consumption. A second major point of this lecture will be the current state of research and a few future technologies, ranging from mainstream (e.g. the Internet of Things) to exotic. Lecturer's short bio: Andrzej Nowak has 10 years of experience in computing technologies, primarily from CERN openlab and Intel. At CERN, he managed a research lab collaborating with Intel and was part of the openlab Chief Technology Office. Andrzej also worked closely and initiated projects with the private sector (e.g. HP and Google), as well as international research institutes, such as EPFL. Currently, Andrzej acts as a consultant on technology and innovation with TIK Services (http://tik.services), and runs a peer-to-peer lending start-up. NB! All Academic Lectures are recorded. No webcast! Because of a problem of the recording equipment, this lecture will be repeated for recording pu...

9. Introduction of pattern recognition by MATLAB practice 2

International Nuclear Information System (INIS)

1999-06-01

The contents of this book starts introduction and examples of pattern recognition. This book describes a vector and matrix, basic statistics and a probability distribution, statistical decision theory and probability density function, liner shunt, vector quantizing and clustering GMM, PCA and KL conversion, LDA, ID 3, a nerve cell modeling, HMM, SVM and Ada boost. It has direction of MATLAB in the appendix.

10. Optoelectronic polarimeter controlled by a graphical user interface of Matlab

International Nuclear Information System (INIS)

Vilardy, J M; Torres, R; Jimenez, C J

2017-01-01

We show the design and implementation of an optical polarimeter using electronic control. The polarimeter has a software with a graphical user interface (GUI) that controls the optoelectronic setup and captures the optical intensity measurement, and finally, this software evaluates the Stokes vector of a state of polarization (SOP) by means of the synchronous detection of optical waves. The proposed optoelectronic polarimeter can determine the Stokes vector of a SOP in a rapid and efficient way. Using the polarimeter proposed in this paper, the students will be able to observe (in an optical bench) and understand the different interactions of the SOP when the optical waves pass through to the linear polarizers and retarder waves plates. The polarimeter prototype could be used as a main tool for the students in order to learn the theory and experimental aspects of the SOP for optical waves via the Stokes vector measurement. The proposed polarimeter controlled by a GUI of Matlab is more attractive and suitable to teach and to learn the polarization of optical waves. (paper)

11. A Matlab Tool for Tumor Localization in Parathyroid Sestamibi Scintigraphy

Directory of Open Access Journals (Sweden)

M. Đurović

2015-11-01

Full Text Available Submarine method for localization of parathyroid tumors (PT has proved to be effective in case of typical pitfalls of conventional scintigraphic methods (combined subtraction and double phase methods. It uses images obtained by standard dynamic parathyroid sestamibi scintigraphy suggested by European Association of Nuclear Medicine. This paper presents: 1 the developed Matlab interface that enables the implementation and evaluation of algorithms for the automatic application of Submarine method; 2 the algorithm for automatic extraction of the entire thyroid region from the background radioactivity using operations from mathematical morphology applied on dynamic scintigrams; 3 the results obtained by algorithm for localization and visualization of PTs based on estimation of exponential decreasing trend of time-activity curves. The algorithm was tested on a group of 20 patients with histopathologically proven PTs using developed Matlab interface.

12. Efficient computation of clipped Voronoi diagram for mesh generation

KAUST Repository

Yan, Dongming

2013-04-01

The Voronoi diagram is a fundamental geometric structure widely used in various fields, especially in computer graphics and geometry computing. For a set of points in a compact domain (i.e. a bounded and closed 2D region or a 3D volume), some Voronoi cells of their Voronoi diagram are infinite or partially outside of the domain, but in practice only the parts of the cells inside the domain are needed, as when computing the centroidal Voronoi tessellation. Such a Voronoi diagram confined to a compact domain is called a clipped Voronoi diagram. We present an efficient algorithm to compute the clipped Voronoi diagram for a set of sites with respect to a compact 2D region or a 3D volume. We also apply the proposed method to optimal mesh generation based on the centroidal Voronoi tessellation. Crown Copyright © 2011 Published by Elsevier Ltd. All rights reserved.

13. Efficient computation of clipped Voronoi diagram for mesh generation

KAUST Repository

Yan, Dongming; Wang, Wen Ping; Lé vy, Bruno L.; Liu, Yang

2013-01-01

The Voronoi diagram is a fundamental geometric structure widely used in various fields, especially in computer graphics and geometry computing. For a set of points in a compact domain (i.e. a bounded and closed 2D region or a 3D volume), some Voronoi cells of their Voronoi diagram are infinite or partially outside of the domain, but in practice only the parts of the cells inside the domain are needed, as when computing the centroidal Voronoi tessellation. Such a Voronoi diagram confined to a compact domain is called a clipped Voronoi diagram. We present an efficient algorithm to compute the clipped Voronoi diagram for a set of sites with respect to a compact 2D region or a 3D volume. We also apply the proposed method to optimal mesh generation based on the centroidal Voronoi tessellation. Crown Copyright © 2011 Published by Elsevier Ltd. All rights reserved.

14. MATLAB simulation for an experimental setup of digital feedback control

International Nuclear Information System (INIS)

Zheng Lifang; Liu Songqiang

2005-01-01

This paper describes the digital feedback simulation using MATLAB for an experimental accelerator control setup. By analyzing the plant characteristic in time-domain and frequency-domain, a guideline for design of digital filter and PID controller is derived. (authors)

15. Software For Computer-Aided Design Of Control Systems

Science.gov (United States)

Wette, Matthew

1994-01-01

Computer Aided Engineering System (CAESY) software developed to provide means to evaluate methods for dealing with users' needs in computer-aided design of control systems. Interpreter program for performing engineering calculations. Incorporates features of both Ada and MATLAB. Designed to be flexible and powerful. Includes internally defined functions, procedures and provides for definition of functions and procedures by user. Written in C language.

16. Wind Turbine Blockset in Matlab/Simulink. General Overview and Description of the Model

DEFF Research Database (Denmark)

Iov, Florin; Hansen, A. D.; Soerensen, P.

This report presents a new developed Matlab/Simulink Toolbox for wind turbine applications. This toolbox has been developed during the research project ?Simulation Platform to model, optimize and design wind turbines? and it has been used as a general developer tool for other three simulation tools......: Saber, DIgSILENT, HAWC. The report provides first a quick overview over Matlab issues and then explains the structure of the developed toolbox. The attention in the report is mainly drawn to the description of the most important mathematical models, which have been developed in the Toolbox. Then, some...

17. Prognostics 101: A tutorial for particle filter-based prognostics algorithm using Matlab

International Nuclear Information System (INIS)

An, Dawn; Choi, Joo-Ho; Kim, Nam Ho

2013-01-01

This paper presents a Matlab-based tutorial for model-based prognostics, which combines a physical model with observed data to identify model parameters, from which the remaining useful life (RUL) can be predicted. Among many model-based prognostics algorithms, the particle filter is used in this tutorial for parameter estimation of damage or a degradation model. The tutorial is presented using a Matlab script with 62 lines, including detailed explanations. As examples, a battery degradation model and a crack growth model are used to explain the updating process of model parameters, damage progression, and RUL prediction. In order to illustrate the results, the RUL at an arbitrary cycle are predicted in the form of distribution along with the median and 90% prediction interval. This tutorial will be helpful for the beginners in prognostics to understand and use the prognostics method, and we hope it provides a standard of particle filter based prognostics. -- Highlights: ► Matlab-based tutorial for model-based prognostics is presented. ► A battery degradation model and a crack growth model are used as examples. ► The RUL at an arbitrary cycle are predicted using the particle filter

18. Research based on matlab method of digital trapezoidal shaping filter

International Nuclear Information System (INIS)

Zhou Qinghua; Zhang Ruanyu; Li Taihua

2008-01-01

In order to develop digital shaping system fast and conveniently, the paper presents the method of optimizing the trapezoidal shaping filter's parameters by using MATLAB, and discusses the affections of the parameters to the shaping result by this method. (authors)

19. An Introduction to Transient Engine Applications Using the Numerical Propulsion System Simulation (NPSS) and MATLAB

Science.gov (United States)

Chin, Jeffrey C.; Csank, Jeffrey T.; Haller, William J.; Seidel, Jonathan A.

2016-01-01

This document outlines methodologies designed to improve the interface between the Numerical Propulsion System Simulation framework and various control and dynamic analyses developed in the Matlab and Simulink environment. Although NPSS is most commonly used for steady-state modeling, this paper is intended to supplement the relatively sparse documentation on it's transient analysis functionality. Matlab has become an extremely popular engineering environment, and better methodologies are necessary to develop tools that leverage the benefits of these disparate frameworks. Transient analysis is not a new feature of the Numerical Propulsion System Simulation (NPSS), but transient considerations are becoming more pertinent as multidisciplinary trade-offs begin to play a larger role in advanced engine designs. This paper serves to supplement the relatively sparse documentation on transient modeling and cover the budding convergence between NPSS and Matlab based modeling toolsets. The following sections explore various design patterns to rapidly develop transient models. Each approach starts with a base model built with NPSS, and assumes the reader already has a basic understanding of how to construct a steady-state model. The second half of the paper focuses on further enhancements required to subsequently interface NPSS with Matlab codes. The first method being the simplest and most straightforward but performance constrained, and the last being the most abstract. These methods aren't mutually exclusive and the specific implementation details could vary greatly based on the designer's discretion. Basic recommendations are provided to organize model logic in a format most easily amenable to integration with existing Matlab control toolsets.

20. Desarrollo de una interfaz para el control del robot IRB desde Matlab

OpenAIRE

Gutiérrez Corbacho, Azahara

2014-01-01

El objetivo de este proyecto es realizar la comunicación con el brazo robótico, IRB120 de ABB, a través de la herramienta de software matemático Matlab. Para ello desarrollaremos un socket de comunicación, que se encargará enviar y procesar los datos. Para comprobar que la comunicación funciona y que el envío de datos se realiza correctamente, se implementarán en Matlab, una serie de interfaces de comunicación con el robot y una aplicación final. La primera, será una interfaz gráfica r...

1. Gene ARMADA: an integrated multi-analysis platform for microarray data implemented in MATLAB.

Science.gov (United States)

Chatziioannou, Aristotelis; Moulos, Panagiotis; Kolisis, Fragiskos N

2009-10-27

The microarray data analysis realm is ever growing through the development of various tools, open source and commercial. However there is absence of predefined rational algorithmic analysis workflows or batch standardized processing to incorporate all steps, from raw data import up to the derivation of significantly differentially expressed gene lists. This absence obfuscates the analytical procedure and obstructs the massive comparative processing of genomic microarray datasets. Moreover, the solutions provided, heavily depend on the programming skills of the user, whereas in the case of GUI embedded solutions, they do not provide direct support of various raw image analysis formats or a versatile and simultaneously flexible combination of signal processing methods. We describe here Gene ARMADA (Automated Robust MicroArray Data Analysis), a MATLAB implemented platform with a Graphical User Interface. This suite integrates all steps of microarray data analysis including automated data import, noise correction and filtering, normalization, statistical selection of differentially expressed genes, clustering, classification and annotation. In its current version, Gene ARMADA fully supports 2 coloured cDNA and Affymetrix oligonucleotide arrays, plus custom arrays for which experimental details are given in tabular form (Excel spreadsheet, comma separated values, tab-delimited text formats). It also supports the analysis of already processed results through its versatile import editor. Besides being fully automated, Gene ARMADA incorporates numerous functionalities of the Statistics and Bioinformatics Toolboxes of MATLAB. In addition, it provides numerous visualization and exploration tools plus customizable export data formats for seamless integration by other analysis tools or MATLAB, for further processing. Gene ARMADA requires MATLAB 7.4 (R2007a) or higher and is also distributed as a stand-alone application with MATLAB Component Runtime. Gene ARMADA provides a

2. The peak efficiency calibration of volume source using 152Eu point source in computer

International Nuclear Information System (INIS)

Shen Tingyun; Qian Jianfu; Nan Qinliang; Zhou Yanguo

1997-01-01

The author describes the method of the peak efficiency calibration of volume source by means of 152 Eu point source for HPGe γ spectrometer. The peak efficiency can be computed by Monte Carlo simulation, after inputting parameter of detector. The computation results are in agreement with the experimental results with an error of +-3.8%, with an exception one is about +-7.4%

3. JMat - Herramienta remota de cálculo y multiusuario para el aprendizaje basado en problemas usando Matlab

Directory of Open Access Journals (Sweden)

2011-01-01

Full Text Available JMat es una herramienta de cálculo basada en JAVA y EJS (Easy Java Simulations, con un esquema cliente / servidor, soporte multi-usuario y acceso remoto a Matlab. La aplicación está orientada a brindar a los usuarios una interacción con Matlab usando tres interfaces: Consola de Comandos, donde se invocan remotamente comandos de texto compatibles con Matlab. Espacio de Trabajo y Graficación, donde se mantiene un registro automático de las variables de usuario y se grafican individualmente. Funciones de usuario y Transferencia de Archivos, donde el usuario crea sus funciones, envía y recibe datos hacia y desde el servidor. JMat requiere un acceso a Internet, un servidor remoto donde esté instalado Matlab y un cliente (Navegador WEB o aplicación. No se requiere Matlab en el cliente. JMat está siendo usada actualmente en la Universidad del Valle en los cursos de Control Automático de Procesos, Control Inteligente, Redes Neuronales Artificiales, Procesamiento de Señales y Tratamiento Digital de Imágenes como herramienta para el aprendizaje basado en problemas empleando la plataforma de eLearning de la Universidad del Valle.

4. Using user models in Matlab® within the Aspen Plus® interface with an Excel® link

Directory of Open Access Journals (Sweden)

Javier Fontalvo Alzate

2014-05-01

Full Text Available Process intensification and new technologies require tools for process design that can be integrated into well-known simulation software, such as Aspen Plus®. Thus, unit operations that are not included in traditional Aspen Plus software packages can be simulated with Matlab® and integrated within the Aspen Plus interface. In this way, the user can take advantage of all of the tools of Aspen Plus, such as optimization, sensitivity analysis and cost estimation. This paper gives a detailed description of how to implement this integration. The interface between Matlab and Aspen Plus is accomplished by sending the relevant information from Aspen Plus to Excel, which feeds the information to a Matlab routine. Once the Matlab routine processes the information, it is returned to Excel and to Aspen Plus. This paper includes the Excel and Matlab template files so the reader can implement their own simulations. By applying the protocol described here, a hybrid distillation-vapor permeation system has been simulated as an example of the applications that can be implemented. For the hybrid system, the effect of membrane selectivity on membrane area and reboiler duty for the partial dehydration of ethanol is studied. Very high selectivities are not necessarily required for an optimum hybrid distillation and vapor permeation system.

5. Computationally Efficient Prediction of Ionic Liquid Properties

DEFF Research Database (Denmark)

Chaban, V. V.; Prezhdo, O. V.

2014-01-01

Due to fundamental differences, room-temperature ionic liquids (RTIL) are significantly more viscous than conventional molecular liquids and require long simulation times. At the same time, RTILs remain in the liquid state over a much broader temperature range than the ordinary liquids. We exploit...... to ambient temperatures. We numerically prove the validity of the proposed concept for density and ionic diffusion of four different RTILs. This simple method enhances the computational efficiency of the existing simulation approaches as applied to RTILs by more than an order of magnitude....

6. Problem-based learning in communication systems using MATLAB and Simulink

CERN Document Server

Choi, Kwonhue

2016-01-01

Designed to help teach and understand communication systems using a classroom-tested, active learning approach. This book covers the basic concepts of signals, and analog and digital communications, to more complex simulations in communication systems. Problem-Based Learning in Communication Systems Using MATLAB and Simulink begins by introducing MATLAB and Simulink to prepare readers who are unfamiliar with these environments in order to tackle projects and exercises included in this book. Discussions on simulation of signals, filter design, sampling and reconstruction, and analog communications are covered next. The book concludes by covering advanced topics such as Viterbi decoding, OFDM and MIMO. In addition, this book contains examples of how to convert waveforms, constructed in simulation, into electric signals. It also includes problems illustrating how to complete actual wireless communications in the band near ultrasonic frequencies. A content-m pping table is included in this book to help instruc...

7. MPBEC, a Matlab Program for Biomolecular Electrostatic Calculations

OpenAIRE

Vergara-Perez, Sandra; Marucho, Marcelo

2015-01-01

One of the most used and efficient approaches to compute electrostatic properties of biological systems is to numerically solve the Poisson-Boltzmann (PB) equation. There are several software packages available that solve the PB equation for molecules in aqueous electrolyte solutions. Most of these software packages are useful for scientists with specialized training and expertise in computational biophysics. However, the user is usually required to manually take several important choices, de...

8. Efficient JPEG 2000 Image Compression Scheme for Multihop Wireless Networks

Directory of Open Access Journals (Sweden)

Halim Sghaier

2011-08-01

Full Text Available When using wireless sensor networks for real-time data transmission, some critical points should be considered. Restricted computational power, reduced memory, narrow bandwidth and energy supplied present strong limits in sensor nodes. Therefore, maximizing network lifetime and minimizing energy consumption are always optimization goals. To overcome the computation and energy limitation of individual sensor nodes during image transmission, an energy efficient image transport scheme is proposed, taking advantage of JPEG2000 still image compression standard using MATLAB and C from Jasper. JPEG2000 provides a practical set of features, not necessarily available in the previous standards. These features were achieved using techniques: the discrete wavelet transform (DWT, and embedded block coding with optimized truncation (EBCOT. Performance of the proposed image transport scheme is investigated with respect to image quality and energy consumption. Simulation results are presented and show that the proposed scheme optimizes network lifetime and reduces significantly the amount of required memory by analyzing the functional influence of each parameter of this distributed image compression algorithm.

9. Automated Development of Accurate Algorithms and Efficient Codes for Computational Aeroacoustics

Science.gov (United States)

Goodrich, John W.; Dyson, Rodger W.

1999-01-01

The simulation of sound generation and propagation in three space dimensions with realistic aircraft components is a very large time dependent computation with fine details. Simulations in open domains with embedded objects require accurate and robust algorithms for propagation, for artificial inflow and outflow boundaries, and for the definition of geometrically complex objects. The development, implementation, and validation of methods for solving these demanding problems is being done to support the NASA pillar goals for reducing aircraft noise levels. Our goal is to provide algorithms which are sufficiently accurate and efficient to produce usable results rapidly enough to allow design engineers to study the effects on sound levels of design changes in propulsion systems, and in the integration of propulsion systems with airframes. There is a lack of design tools for these purposes at this time. Our technical approach to this problem combines the development of new, algorithms with the use of Mathematica and Unix utilities to automate the algorithm development, code implementation, and validation. We use explicit methods to ensure effective implementation by domain decomposition for SPMD parallel computing. There are several orders of magnitude difference in the computational efficiencies of the algorithms which we have considered. We currently have new artificial inflow and outflow boundary conditions that are stable, accurate, and unobtrusive, with implementations that match the accuracy and efficiency of the propagation methods. The artificial numerical boundary treatments have been proven to have solutions which converge to the full open domain problems, so that the error from the boundary treatments can be driven as low as is required. The purpose of this paper is to briefly present a method for developing highly accurate algorithms for computational aeroacoustics, the use of computer automation in this process, and a brief survey of the algorithms that

10. Small-signal modelling and analysis of switching converters using MATLAB

NARCIS (Netherlands)

Duarte, J.L.

1998-01-01

A general procedure for the description of power electronic circuit dynamics is proposed, with the intention of control system design and discrete-time system simulation. The approach is especially suited to be used along with computeraided analysis and synthesis software packages such as MATLAB.

11. An Efficient Biometric-Based Algorithm Using Heart Rate Variability for Securing Body Sensor Networks

Directory of Open Access Journals (Sweden)

Sandeep Pirbhulal

2015-06-01

Full Text Available Body Sensor Network (BSN is a network of several associated sensor nodes on, inside or around the human body to monitor vital signals, such as, Electroencephalogram (EEG, Photoplethysmography (PPG, Electrocardiogram (ECG, etc. Each sensor node in BSN delivers major information; therefore, it is very significant to provide data confidentiality and security. All existing approaches to secure BSN are based on complex cryptographic key generation procedures, which not only demands high resource utilization and computation time, but also consumes large amount of energy, power and memory during data transmission. However, it is indispensable to put forward energy efficient and computationally less complex authentication technique for BSN. In this paper, a novel biometric-based algorithm is proposed, which utilizes Heart Rate Variability (HRV for simple key generation process to secure BSN. Our proposed algorithm is compared with three data authentication techniques, namely Physiological Signal based Key Agreement (PSKA, Data Encryption Standard (DES and Rivest Shamir Adleman (RSA. Simulation is performed in Matlab and results suggest that proposed algorithm is quite efficient in terms of transmission time utilization, average remaining energy and total power consumption.

12. An Efficient Biometric-Based Algorithm Using Heart Rate Variability for Securing Body Sensor Networks

Science.gov (United States)

Pirbhulal, Sandeep; Zhang, Heye; Mukhopadhyay, Subhas Chandra; Li, Chunyue; Wang, Yumei; Li, Guanglin; Wu, Wanqing; Zhang, Yuan-Ting

2015-01-01

Body Sensor Network (BSN) is a network of several associated sensor nodes on, inside or around the human body to monitor vital signals, such as, Electroencephalogram (EEG), Photoplethysmography (PPG), Electrocardiogram (ECG), etc. Each sensor node in BSN delivers major information; therefore, it is very significant to provide data confidentiality and security. All existing approaches to secure BSN are based on complex cryptographic key generation procedures, which not only demands high resource utilization and computation time, but also consumes large amount of energy, power and memory during data transmission. However, it is indispensable to put forward energy efficient and computationally less complex authentication technique for BSN. In this paper, a novel biometric-based algorithm is proposed, which utilizes Heart Rate Variability (HRV) for simple key generation process to secure BSN. Our proposed algorithm is compared with three data authentication techniques, namely Physiological Signal based Key Agreement (PSKA), Data Encryption Standard (DES) and Rivest Shamir Adleman (RSA). Simulation is performed in Matlab and results suggest that proposed algorithm is quite efficient in terms of transmission time utilization, average remaining energy and total power consumption. PMID:26131666

13. Energy-Efficient Abundant-Data Computing: The N3XT 1,000X

OpenAIRE

Aly Mohamed M. Sabry; Gao Mingyu; Hills Gage; Lee Chi-Shuen; Pinter Greg; Shulaker Max M.; Wu Tony F.; Asheghi Mehdi; Bokor Jeff; Franchetti Franz; Goodson Kenneth E.; Kozyrakis Christos; Markov Igor; Olukotun Kunle; Pileggi Larry

2015-01-01

Next generation information technologies will process unprecedented amounts of loosely structured data that overwhelm existing computing systems. N3XT improves the energy efficiency of abundant data applications 1000 fold by using new logic and memory technologies 3D integration with fine grained connectivity and new architectures for computation immersed in memory.

14. Improving computational efficiency of Monte Carlo simulations with variance reduction

International Nuclear Information System (INIS)

Turner, A.; Davis, A.

2013-01-01

CCFE perform Monte-Carlo transport simulations on large and complex tokamak models such as ITER. Such simulations are challenging since streaming and deep penetration effects are equally important. In order to make such simulations tractable, both variance reduction (VR) techniques and parallel computing are used. It has been found that the application of VR techniques in such models significantly reduces the efficiency of parallel computation due to 'long histories'. VR in MCNP can be accomplished using energy-dependent weight windows. The weight window represents an 'average behaviour' of particles, and large deviations in the arriving weight of a particle give rise to extreme amounts of splitting being performed and a long history. When running on parallel clusters, a long history can have a detrimental effect on the parallel efficiency - if one process is computing the long history, the other CPUs complete their batch of histories and wait idle. Furthermore some long histories have been found to be effectively intractable. To combat this effect, CCFE has developed an adaptation of MCNP which dynamically adjusts the WW where a large weight deviation is encountered. The method effectively 'de-optimises' the WW, reducing the VR performance but this is offset by a significant increase in parallel efficiency. Testing with a simple geometry has shown the method does not bias the result. This 'long history method' has enabled CCFE to significantly improve the performance of MCNP calculations for ITER on parallel clusters, and will be beneficial for any geometry combining streaming and deep penetration effects. (authors)

15. An energy-efficient failure detector for vehicular cloud computing.

Science.gov (United States)

Liu, Jiaxi; Wu, Zhibo; Dong, Jian; Wu, Jin; Wen, Dongxin

2018-01-01

Failure detectors are one of the fundamental components for maintaining the high availability of vehicular cloud computing. In vehicular cloud computing, lots of RSUs are deployed along the road to improve the connectivity. Many of them are equipped with solar battery due to the unavailability or excess expense of wired electrical power. So it is important to reduce the battery consumption of RSU. However, the existing failure detection algorithms are not designed to save battery consumption RSU. To solve this problem, a new energy-efficient failure detector 2E-FD has been proposed specifically for vehicular cloud computing. 2E-FD does not only provide acceptable failure detection service, but also saves the battery consumption of RSU. Through the comparative experiments, the results show that our failure detector has better performance in terms of speed, accuracy and battery consumption.

16. BOLDSync: a MATLAB-based toolbox for synchronized stimulus presentation in functional MRI.

Science.gov (United States)

Joshi, Jitesh; Saharan, Sumiti; Mandal, Pravat K

2014-02-15

Precise and synchronized presentation of paradigm stimuli in functional magnetic resonance imaging (fMRI) is central to obtaining accurate information about brain regions involved in a specific task. In this manuscript, we present a new MATLAB-based toolbox, BOLDSync, for synchronized stimulus presentation in fMRI. BOLDSync provides a user friendly platform for design and presentation of visual, audio, as well as multimodal audio-visual (AV) stimuli in functional imaging experiments. We present simulation experiments that demonstrate the millisecond synchronization accuracy of BOLDSync, and also illustrate the functionalities of BOLDSync through application to an AV fMRI study. BOLDSync gains an advantage over other available proprietary and open-source toolboxes by offering a user friendly and accessible interface that affords both precision in stimulus presentation and versatility across various types of stimulus designs and system setups. BOLDSync is a reliable, efficient, and versatile solution for synchronized stimulus presentation in fMRI study. Copyright © 2013 Elsevier B.V. All rights reserved.

17. Efficient computation of smoothing splines via adaptive basis sampling

KAUST Repository

Ma, Ping

2015-06-24

© 2015 Biometrika Trust. Smoothing splines provide flexible nonparametric regression estimators. However, the high computational cost of smoothing splines for large datasets has hindered their wide application. In this article, we develop a new method, named adaptive basis sampling, for efficient computation of smoothing splines in super-large samples. Except for the univariate case where the Reinsch algorithm is applicable, a smoothing spline for a regression problem with sample size n can be expressed as a linear combination of n basis functions and its computational complexity is generally O(n3). We achieve a more scalable computation in the multivariate case by evaluating the smoothing spline using a smaller set of basis functions, obtained by an adaptive sampling scheme that uses values of the response variable. Our asymptotic analysis shows that smoothing splines computed via adaptive basis sampling converge to the true function at the same rate as full basis smoothing splines. Using simulation studies and a large-scale deep earth core-mantle boundary imaging study, we show that the proposed method outperforms a sampling method that does not use the values of response variables.

18. Efficient computation of smoothing splines via adaptive basis sampling

KAUST Repository

Ma, Ping; Huang, Jianhua Z.; Zhang, Nan

2015-01-01

© 2015 Biometrika Trust. Smoothing splines provide flexible nonparametric regression estimators. However, the high computational cost of smoothing splines for large datasets has hindered their wide application. In this article, we develop a new method, named adaptive basis sampling, for efficient computation of smoothing splines in super-large samples. Except for the univariate case where the Reinsch algorithm is applicable, a smoothing spline for a regression problem with sample size n can be expressed as a linear combination of n basis functions and its computational complexity is generally O(n3). We achieve a more scalable computation in the multivariate case by evaluating the smoothing spline using a smaller set of basis functions, obtained by an adaptive sampling scheme that uses values of the response variable. Our asymptotic analysis shows that smoothing splines computed via adaptive basis sampling converge to the true function at the same rate as full basis smoothing splines. Using simulation studies and a large-scale deep earth core-mantle boundary imaging study, we show that the proposed method outperforms a sampling method that does not use the values of response variables.

19. Calcolo scientifico esercizi e problemi risolti con Matlab e Octave

CERN Document Server

Quarteroni, Alfio; Gervasio, Paola

2017-01-01

Questo testo è concepito per i corsi delle Facoltà di Ingegneria e di Scienze. Esso affronta tutti gli argomenti tipici della Matematica Numerica, spaziando dal problema di risolvere sistemi di equazioni lineari e non lineari a quello di approssimare una funzione, di calcolare i suoi minimi, le sue derivate ed il suo integrale definito fino alla risoluzione di equazioni differenziali ordinarie e alle derivate parziali con metodi alle differenze finite ed agli elementi finiti. Un capitolo iniziale conduce lo studente ad un rapido ripasso degli argomenti dell'Analisi Matematica e dell'Algebra Lineare di uso frequente nel volume e ad una introduzione ai linguaggi MATLAB e Octave. Al fine di rendere maggiormente incisiva la presentazione e fornire un riscontro quantitativo immediato alla teoria vengono implementati in linguaggio MATLAB e Octave tutti gli algoritmi che via via si introducono. Vengono inoltre proposti numerosi esercizi, tutti risolti per esteso, ed esempi, anche con riferimento ad applicazioni in...

20. MATLAB based beam orbit correction system of HLS storage ring

International Nuclear Information System (INIS)

Ding Shichuan; Liu Gongfa; Xuan Ke; Li Weimin; Wang Lin; Wang Jigang; Li Chuan; Bao Xun; Guo Weiqun

2006-01-01

The distortion of closed orbit usually causes much side effect which is harmful to synchrotron radiation source such as HLS, so it is necessary to correct the distortion of closed orbit. In this paper, the correction principle, development procedure and test of MATLAB based on beam orbit correction system of HLS storage ring are described. The correction system is consisted of the beam orbit measure system, corrector magnet system and the control system, and the beam orbit correction code based on MATLAB is working on the operation interface. The data of the beam orbit are analyzed and calculated firstly, and then the orbit is corrected by changing corrector strength via control system. The test shows that the distortion of closed orbit is from max 4.468 mm before correction to max 0.299 mm after correction as well as SDEV is from 2.986 mm to 0.087 mm. So the correction system reaches the design goal. (authors)

1. Short Project-Based Learning with MATLAB Applications to Support the Learning of Video-Image Processing

Science.gov (United States)

Gil, Pablo

2017-10-01

University courses concerning Computer Vision and Image Processing are generally taught using a traditional methodology that is focused on the teacher rather than on the students. This approach is consequently not effective when teachers seek to attain cognitive objectives involving their students' critical thinking. This manuscript covers the development, implementation and assessment of a short project-based engineering course with MATLAB applications Multimedia Engineering being taken by Bachelor's degree students. The principal goal of all course lectures and hands-on laboratory activities was for the students to not only acquire image-specific technical skills but also a general knowledge of data analysis so as to locate phenomena in pixel regions of images and video frames. This would hopefully enable the students to develop skills regarding the implementation of the filters, operators, methods and techniques used for image processing and computer vision software libraries. Our teaching-learning process thus permits the accomplishment of knowledge assimilation, student motivation and skill development through the use of a continuous evaluation strategy to solve practical and real problems by means of short projects designed using MATLAB applications. Project-based learning is not new. This approach has been used in STEM learning in recent decades. But there are many types of projects. The aim of the current study is to analyse the efficacy of short projects as a learning tool when compared to long projects during which the students work with more independence. This work additionally presents the impact of different types of activities, and not only short projects, on students' overall results in this subject. Moreover, a statistical study has allowed the author to suggest a link between the students' success ratio and the type of content covered and activities completed on the course. The results described in this paper show that those students who took part

2. libstable: Fast, Parallel, and High-Precision Computation of α-Stable Distributions in R, C/C++, and MATLAB

Directory of Open Access Journals (Sweden)

Javier Royuela-del-Val

2017-06-01

Full Text Available α-stable distributions are a family of well-known probability distributions. However, the lack of closed analytical expressions hinders their application. Currently, several tools have been developed to numerically evaluate their density and distribution functions or to estimate their parameters, but available solutions either do not reach sufficient precision on their evaluations or are excessively slow for practical purposes. Moreover, they do not take full advantage of the parallel processing capabilities of current multi-core machines. Other solutions work only on a subset of the α-stable parameter space. In this paper we present an R package and a C/C++ library with a MATLAB front-end that permit parallelized, fast and high precision evaluation of density, distribution and quantile functions, as well as random variable generation and parameter estimation of α-stable distributions in their whole parameter space. The described library can be easily integrated into third party developments.

3. Using MATLAB software with Tomcat server and Java platform for remote image analysis in pathology.

Science.gov (United States)

Markiewicz, Tomasz

2011-03-30

The Matlab software is a one of the most advanced development tool for application in engineering practice. From our point of view the most important is the image processing toolbox, offering many built-in functions, including mathematical morphology, and implementation of a many artificial neural networks as AI. It is very popular platform for creation of the specialized program for image analysis, also in pathology. Based on the latest version of Matlab Builder Java toolbox, it is possible to create the software, serving as a remote system for image analysis in pathology via internet communication. The internet platform can be realized based on Java Servlet Pages with Tomcat server as servlet container. In presented software implementation we propose remote image analysis realized by Matlab algorithms. These algorithms can be compiled to executable jar file with the help of Matlab Builder Java toolbox. The Matlab function must be declared with the set of input data, output structure with numerical results and Matlab web figure. Any function prepared in that manner can be used as a Java function in Java Servlet Pages (JSP). The graphical user interface providing the input data and displaying the results (also in graphical form) must be implemented in JSP. Additionally the data storage to database can be implemented within algorithm written in Matlab with the help of Matlab Database Toolbox directly with the image processing. The complete JSP page can be run by Tomcat server. The proposed tool for remote image analysis was tested on the Computerized Analysis of Medical Images (CAMI) software developed by author. The user provides image and case information (diagnosis, staining, image parameter etc.). When analysis is initialized, input data with image are sent to servlet on Tomcat. When analysis is done, client obtains the graphical results as an image with marked recognized cells and also the quantitative output. Additionally, the results are stored in a server

4. Responsive Graphical User Interface (ReGUI) and its Implementation in MATLAB

OpenAIRE

Mikulszky, Matej; Pocsova, Jana; Mojzisova, Andrea; Podlubny, Igor

2017-01-01

In this paper we introduce the responsive graphical user interface (ReGUI) approach to creating applications, and demonstrate how this approach can be implemented in MATLAB. The same general technique can be used in other programming languages.

5. Efficient computation of the joint sample frequency spectra for multiple populations.

Science.gov (United States)

Kamm, John A; Terhorst, Jonathan; Song, Yun S

2017-01-01

A wide range of studies in population genetics have employed the sample frequency spectrum (SFS), a summary statistic which describes the distribution of mutant alleles at a polymorphic site in a sample of DNA sequences and provides a highly efficient dimensional reduction of large-scale population genomic variation data. Recently, there has been much interest in analyzing the joint SFS data from multiple populations to infer parameters of complex demographic histories, including variable population sizes, population split times, migration rates, admixture proportions, and so on. SFS-based inference methods require accurate computation of the expected SFS under a given demographic model. Although much methodological progress has been made, existing methods suffer from numerical instability and high computational complexity when multiple populations are involved and the sample size is large. In this paper, we present new analytic formulas and algorithms that enable accurate, efficient computation of the expected joint SFS for thousands of individuals sampled from hundreds of populations related by a complex demographic model with arbitrary population size histories (including piecewise-exponential growth). Our results are implemented in a new software package called momi (MOran Models for Inference). Through an empirical study we demonstrate our improvements to numerical stability and computational complexity.

6. Matlab based Toolkits used to Interface with Optical Design Software for NASA's James Webb Space Telescope

Science.gov (United States)

Howard, Joseph

2007-01-01

The viewgraph presentation provides an introduction to the James Webb Space Telescope (JWST). The first part provides a brief overview of Matlab toolkits including CodeV, OSLO, and Zemax Toolkits. The toolkit overview examines purpose, layout, how Matlab gets data from CodeV, function layout, and using cvHELP. The second part provides examples of use with JWST, including wavefront sensitivities and alignment simulations.

7. Statistically and Computationally Efficient Estimating Equations for Large Spatial Datasets

KAUST Repository

Sun, Ying; Stein, Michael L.

2014-01-01

For Gaussian process models, likelihood based methods are often difficult to use with large irregularly spaced spatial datasets, because exact calculations of the likelihood for n observations require O(n3) operations and O(n2) memory. Various approximation methods have been developed to address the computational difficulties. In this paper, we propose new unbiased estimating equations based on score equation approximations that are both computationally and statistically efficient. We replace the inverse covariance matrix that appears in the score equations by a sparse matrix to approximate the quadratic forms, then set the resulting quadratic forms equal to their expected values to obtain unbiased estimating equations. The sparse matrix is constructed by a sparse inverse Cholesky approach to approximate the inverse covariance matrix. The statistical efficiency of the resulting unbiased estimating equations are evaluated both in theory and by numerical studies. Our methods are applied to nearly 90,000 satellite-based measurements of water vapor levels over a region in the Southeast Pacific Ocean.

8. Statistically and Computationally Efficient Estimating Equations for Large Spatial Datasets

KAUST Repository

Sun, Ying

2014-11-07

For Gaussian process models, likelihood based methods are often difficult to use with large irregularly spaced spatial datasets, because exact calculations of the likelihood for n observations require O(n3) operations and O(n2) memory. Various approximation methods have been developed to address the computational difficulties. In this paper, we propose new unbiased estimating equations based on score equation approximations that are both computationally and statistically efficient. We replace the inverse covariance matrix that appears in the score equations by a sparse matrix to approximate the quadratic forms, then set the resulting quadratic forms equal to their expected values to obtain unbiased estimating equations. The sparse matrix is constructed by a sparse inverse Cholesky approach to approximate the inverse covariance matrix. The statistical efficiency of the resulting unbiased estimating equations are evaluated both in theory and by numerical studies. Our methods are applied to nearly 90,000 satellite-based measurements of water vapor levels over a region in the Southeast Pacific Ocean.

9. Quantification of larval zebrafish motor function in multiwell plates using open-source MATLAB applications.

Science.gov (United States)

Zhou, Yangzhong; Cattley, Richard T; Cario, Clinton L; Bai, Qing; Burton, Edward A

2014-07-01

This article describes a method to quantify the movements of larval zebrafish in multiwell plates, using the open-source MATLAB applications LSRtrack and LSRanalyze. The protocol comprises four stages: generation of high-quality, flatly illuminated video recordings with exposure settings that facilitate object recognition; analysis of the resulting recordings using tools provided in LSRtrack to optimize tracking accuracy and motion detection; analysis of tracking data using LSRanalyze or custom MATLAB scripts; and implementation of validation controls. The method is reliable, automated and flexible, requires plate format suitable for high-throughput applications.

10. Evaluation of discrete modeling efficiency of asynchronous electric machines

OpenAIRE

Byczkowska-Lipińska, Liliana; Stakhiv, Petro; Hoholyuk, Oksana; Vasylchyshyn, Ivanna

2011-01-01

In the paper the problem of effective mathematical macromodels in the form of state variables intended for asynchronous motor transient analysis is considered. Their comparing with traditional mathematical models of asynchronous motors including models built into MATLAB/Simulink software was carried out and analysis of their efficiency was conducted.

11. Modeling Water Balance of Dammed Lakes Using Computer Code Matlab-Simulink/ Modelowanie Bilansu Wodnego Piętrzonych Jezior Za Pomocą Programu Komputerowego Matlab-Simulink

Directory of Open Access Journals (Sweden)

Błażejewski Ryszard

2014-09-01

Full Text Available Praca przedstawia bilans wodny przepływowego piętrzonego jeziora, uwzględniający dopływ powierzchniowy, dopływ i odpływ podziemny opisany równaniem Dupuita, opad na powierzchnię jeziora, parowanie z powierzchni wody oraz odpływ w przekroju zamkniętym jazem piętrzącym. Z uwagi na nieliniowe związki wymienionych składników bilansu z poziomem wody w jeziorze, do obliczeń wykorzystano program komuterowy Matlab-Simulink®. Przydatność modelu sprawdzono na przykładzie Jeziora Sławianowskiego o powierzchni 276 ha i średniej głębokości - 6,6 m. Jezioro to zostało podzielone na dwa akweny o zróżnicowanej głębokości. Wyniki obliczeń miesięcznych bilansów wodnych dla roku hydrologicznego 2009, wykazały dobrą zgodność z pomiarami jedynie dla trzech pierwszych miesięcy. Stwierdzono, że dla zmniejszenia błędów obliczeniowych należałoby skrócić interwał bilansowania do jednej doby. Kalibracja modelu byłaby łatwiejsza i bardziej adekwatna, gdyby do oszacowania przewodności hydraulicznej przyległych do jeziora gruntów i osadów dennych wykorzystać badania poziomów wody w piezometrach, zlokalizowanych w kilku transektach, prostopadłych do linii brzegowej jeziora.

12. Computation of the Mutual Inductance between Air-Cored Coils of Wireless Power Transformer

International Nuclear Information System (INIS)

Anele, A O; Hamam, Y; Djouani, K; Chassagne, L; Alayli, Y; Linares, J

2015-01-01

Wireless power transfer system is a modern technology which allows the transfer of electric power between the air-cored coils of its transformer via high frequency magnetic fields. However, due to its coil separation distance and misalignment, maximum power transfer is not guaranteed. Based on a more efficient and general model available in the literature, rederived mathematical models for evaluating the mutual inductance between circular coils with and without lateral and angular misalignment are presented. Rather than presenting results numerically, the computed results are graphically implemented using MATLAB codes. The results are compared with the published ones and clarification regarding the errors made are presented. In conclusion, this study shows that power transfer efficiency of the system can be improved if a higher frequency alternating current is supplied to the primary coil, the reactive parts of the coils are compensated with capacitors and ferrite cores are added to the coils. (paper)

13. Efficient scatter model for simulation of ultrasound images from computed tomography data

Science.gov (United States)

D'Amato, J. P.; Lo Vercio, L.; Rubi, P.; Fernandez Vera, E.; Barbuzza, R.; Del Fresno, M.; Larrabide, I.

2015-12-01

Background and motivation: Real-time ultrasound simulation refers to the process of computationally creating fully synthetic ultrasound images instantly. Due to the high value of specialized low cost training for healthcare professionals, there is a growing interest in the use of this technology and the development of high fidelity systems that simulate the acquisitions of echographic images. The objective is to create an efficient and reproducible simulator that can run either on notebooks or desktops using low cost devices. Materials and methods: We present an interactive ultrasound simulator based on CT data. This simulator is based on ray-casting and provides real-time interaction capabilities. The simulation of scattering that is coherent with the transducer position in real time is also introduced. Such noise is produced using a simplified model of multiplicative noise and convolution with point spread functions (PSF) tailored for this purpose. Results: The computational efficiency of scattering maps generation was revised with an improved performance. This allowed a more efficient simulation of coherent scattering in the synthetic echographic images while providing highly realistic result. We describe some quality and performance metrics to validate these results, where a performance of up to 55fps was achieved. Conclusion: The proposed technique for real-time scattering modeling provides realistic yet computationally efficient scatter distributions. The error between the original image and the simulated scattering image was compared for the proposed method and the state-of-the-art, showing negligible differences in its distribution.

14. A synthetic visual plane algorithm for visibility computation in consideration of accuracy and efficiency

Science.gov (United States)

Yu, Jieqing; Wu, Lixin; Hu, Qingsong; Yan, Zhigang; Zhang, Shaoliang

2017-12-01

Visibility computation is of great interest to location optimization, environmental planning, ecology, and tourism. Many algorithms have been developed for visibility computation. In this paper, we propose a novel method of visibility computation, called synthetic visual plane (SVP), to achieve better performance with respect to efficiency, accuracy, or both. The method uses a global horizon, which is a synthesis of line-of-sight information of all nearer points, to determine the visibility of a point, which makes it an accurate visibility method. We used discretization of horizon to gain a good performance in efficiency. After discretization, the accuracy and efficiency of SVP depends on the scale of discretization (i.e., zone width). The method is more accurate at smaller zone widths, but this requires a longer operating time. Users must strike a balance between accuracy and efficiency at their discretion. According to our experiments, SVP is less accurate but more efficient than R2 if the zone width is set to one grid. However, SVP becomes more accurate than R2 when the zone width is set to 1/24 grid, while it continues to perform as fast or faster than R2. Although SVP performs worse than reference plane and depth map with respect to efficiency, it is superior in accuracy to these other two algorithms.

15. Energy efficient hybrid computing systems using spin devices

Science.gov (United States)

Emerging spin-devices like magnetic tunnel junctions (MTJ's), spin-valves and domain wall magnets (DWM) have opened new avenues for spin-based logic design. This work explored potential computing applications which can exploit such devices for higher energy-efficiency and performance. The proposed applications involve hybrid design schemes, where charge-based devices supplement the spin-devices, to gain large benefits at the system level. As an example, lateral spin valves (LSV) involve switching of nanomagnets using spin-polarized current injection through a metallic channel such as Cu. Such spin-torque based devices possess several interesting properties that can be exploited for ultra-low power computation. Analog characteristic of spin current facilitate non-Boolean computation like majority evaluation that can be used to model a neuron. The magneto-metallic neurons can operate at ultra-low terminal voltage of ˜20mV, thereby resulting in small computation power. Moreover, since nano-magnets inherently act as memory elements, these devices can facilitate integration of logic and memory in interesting ways. The spin based neurons can be integrated with CMOS and other emerging devices leading to different classes of neuromorphic/non-Von-Neumann architectures. The spin-based designs involve mixed-mode' processing and hence can provide very compact and ultra-low energy solutions for complex computation blocks, both digital as well as analog. Such low-power, hybrid designs can be suitable for various data processing applications like cognitive computing, associative memory, and currentmode on-chip global interconnects. Simulation results for these applications based on device-circuit co-simulation framework predict more than ˜100x improvement in computation energy as compared to state of the art CMOS design, for optimal spin-device parameters.

16. Development of a UNIX network compatible reactivity computer

International Nuclear Information System (INIS)

Sanchez, R.F.; Edwards, R.M.

1996-01-01

A state-of-the-art UNIX network compatible controller and UNIX host workstation with MATLAB/SIMULINK software were used to develop, implement, and validate a digital reactivity calculation. An objective of the development was to determine why a Macintosh-based reactivity computer reactivity output drifted intolerably

17. A new computationally-efficient two-dimensional model for boron implantation into single-crystal silicon

International Nuclear Information System (INIS)

Klein, K.M.; Park, C.; Yang, S.; Morris, S.; Do, V.; Tasch, F.

1992-01-01

We have developed a new computationally-efficient two-dimensional model for boron implantation into single-crystal silicon. This paper reports that this new model is based on the dual Pearson semi-empirical implant depth profile model and the UT-MARLOWE Monte Carlo boron ion implantation model. This new model can predict with very high computational efficiency two-dimensional as-implanted boron profiles as a function of energy, dose, tilt angle, rotation angle, masking edge orientation, and masking edge thickness

18. Identification of the main thermal characteristics of building components using MATLAB

DEFF Research Database (Denmark)

Jimenez, M.J.; Madsen, Henrik; Andersen, Klaus Kaae

2008-01-01

This paper presents the application of the IDENT Graphical User Interface of MATLAB to estimate the thermal properties of building components from outdoor dynamic testing, imposing appropriate physical constraints and assuming linear and time invariant parametric models. The theory is briefly...

19. Adding computationally efficient realism to Monte Carlo turbulence simulation

Science.gov (United States)

Campbell, C. W.

1985-01-01

Frequently in aerospace vehicle flight simulation, random turbulence is generated using the assumption that the craft is small compared to the length scales of turbulence. The turbulence is presumed to vary only along the flight path of the vehicle but not across the vehicle span. The addition of the realism of three-dimensionality is a worthy goal, but any such attempt will not gain acceptance in the simulator community unless it is computationally efficient. A concept for adding three-dimensional realism with a minimum of computational complexity is presented. The concept involves the use of close rational approximations to irrational spectra and cross-spectra so that systems of stable, explicit difference equations can be used to generate the turbulence.

20. SEDRX: A computer program for the simulation Si(Li) and Ge(Hp) x-ray detectors efficiency

International Nuclear Information System (INIS)

Benamar, M.A.; Benouali, A.; Tchantchane, A.; Azbouche, A.; Tobbeche, S. Centre de Developpement des Techniques Nucleaires, Algiers; Labo. des Techniques Nucleaires)

1992-12-01

The difficulties encountered in measuring the x-ray detectors efficiency has motivated to develop a computer program to simulate this parameter. this program computes the efficiency of detectors as a function of energy. the computation of this parameter is based on the fitting coefficients of absorption in the case of photoelectric, coherent and incoherent factors. These coefficients are given by Mc Master library or may be determined by the interpolation based on cubic splines

1. Simulasi Teknik Modulasi Ofdm Qpsk Dengan Menggunakan Matlab

OpenAIRE

Subrata, Rosalia H; Gozali, Ferrianto

2015-01-01

This paper provides a brief explanation of the processing steps involved in Orthogonal Frequency Division Multiplexing (OFDM) with Quadrature Phase Shift Keying (QPSK) modulation technique implemented as a simulation program in MatLab. Input data of the simulation program in the form of random bit stream or text can be selected by users. The process conducted in the simulation is divided into three consecutive steps, processes in the OFDM transmitter, in transmission channel and in the OFDM r...

2. MATLAB-Based Program for Teaching Autocorrelation Function and Noise Concepts

Science.gov (United States)

Jovanovic Dolecek, G.

2012-01-01

An attractive MATLAB-based tool for teaching the basics of autocorrelation function and noise concepts is presented in this paper. This tool enhances traditional in-classroom lecturing. The demonstrations of the tool described here highlight the description of the autocorrelation function (ACF) in a general case for wide-sense stationary (WSS)…

3. A highly efficient parallel algorithm for solving the neutron diffusion nodal equations on shared-memory computers

International Nuclear Information System (INIS)

Azmy, Y.Y.; Kirk, B.L.

1990-01-01

Modern parallel computer architectures offer an enormous potential for reducing CPU and wall-clock execution times of large-scale computations commonly performed in various applications in science and engineering. Recently, several authors have reported their efforts in developing and implementing parallel algorithms for solving the neutron diffusion equation on a variety of shared- and distributed-memory parallel computers. Testing of these algorithms for a variety of two- and three-dimensional meshes showed significant speedup of the computation. Even for very large problems (i.e., three-dimensional fine meshes) executed concurrently on a few nodes in serial (nonvector) mode, however, the measured computational efficiency is very low (40 to 86%). In this paper, the authors present a highly efficient (∼85 to 99.9%) algorithm for solving the two-dimensional nodal diffusion equations on the Sequent Balance 8000 parallel computer. Also presented is a model for the performance, represented by the efficiency, as a function of problem size and the number of participating processors. The model is validated through several tests and then extrapolated to larger problems and more processors to predict the performance of the algorithm in more computationally demanding situations

4. A Computational Framework for Efficient Low Temperature Plasma Simulations

Science.gov (United States)

Verma, Abhishek Kumar; Venkattraman, Ayyaswamy

2016-10-01

Over the past years, scientific computing has emerged as an essential tool for the investigation and prediction of low temperature plasmas (LTP) applications which includes electronics, nanomaterial synthesis, metamaterials etc. To further explore the LTP behavior with greater fidelity, we present a computational toolbox developed to perform LTP simulations. This framework will allow us to enhance our understanding of multiscale plasma phenomenon using high performance computing tools mainly based on OpenFOAM FVM distribution. Although aimed at microplasma simulations, the modular framework is able to perform multiscale, multiphysics simulations of physical systems comprises of LTP. Some salient introductory features are capability to perform parallel, 3D simulations of LTP applications on unstructured meshes. Performance of the solver is tested based on numerical results assessing accuracy and efficiency of benchmarks for problems in microdischarge devices. Numerical simulation of microplasma reactor at atmospheric pressure with hemispherical dielectric coated electrodes will be discussed and hence, provide an overview of applicability and future scope of this framework.

5. A Simulation Platform To Model, Optimize And Design Wind Turbines. The Matlab/Simulink Toolbox

Directory of Open Access Journals (Sweden)

Anca Daniela HANSEN

2002-12-01

Full Text Available In the last years Matlab / Simulink® has become the most used software for modeling and simulation of dynamic systems. Wind energy conversion systems are for example such systems, containing subsystems with different ranges of the time constants: wind, turbine, generator, power electronics, transformer and grid. The electrical generator and the power converter need the smallest simulation step and therefore, these blocks decide the simulation speed. This paper presents a new and integrated simulation platform for modeling, optimizing and designing wind turbines. The platform contains different simulation tools: Matlab / Simulink - used as basic modeling tool, HAWC, DIgSilent and Saber.

6. EEGVIS: A MATLAB toolbox for browsing, exploring, and viewing large datasets

Directory of Open Access Journals (Sweden)

Kay A Robbins

2012-05-01

Full Text Available Recent advances in data monitoring and sensor technology have accelerated the acquisition of very large data sets. Streaming data sets from instrumentation such as multi-channel EEG recording usually must undergo substantial pre-processing and artifact removal. Even when using automated procedures, most scientists engage in laborious manual examination and processing to assure high quality data and to indentify interesting or problematic data segments. Researchers also do not have a convenient method of method of visually assessing the effects of applying any stage in a processing pipeline. EEGVIS is a MATLAB toolbox that allows users to quickly explore multi-channel EEG and other large array-based data sets using multi-scale drill-down techniques. Customizable summary views reveal potentially interesting sections of data, which users can explore further by clicking to examine using detailed viewing components. The viewer and a companion browser are built on our MoBBED framework, which has a library of modular viewing components that can be mixed and matched to best reveal structure. Users can easily create new viewers for their specific data without any programming during the exploration process. These viewers automatically support pan, zoom, resizing of individual components, and cursor exploration. The toolbox can be used directly in MATLAB at any stage in a processing pipeline, as a plug in for EEGLAB, or as a standalone precompiled application without MATLAB running. EEGVIS and its supporting packages are freely available under the GNU general public license at http://visual.cs.utsa.edu/ eegvis.

7. EEGVIS: A MATLAB Toolbox for Browsing, Exploring, and Viewing Large Datasets.

Science.gov (United States)

Robbins, Kay A

2012-01-01

Recent advances in data monitoring and sensor technology have accelerated the acquisition of very large data sets. Streaming data sets from instrumentation such as multi-channel EEG recording usually must undergo substantial pre-processing and artifact removal. Even when using automated procedures, most scientists engage in laborious manual examination and processing to assure high quality data and to indentify interesting or problematic data segments. Researchers also do not have a convenient method of method of visually assessing the effects of applying any stage in a processing pipeline. EEGVIS is a MATLAB toolbox that allows users to quickly explore multi-channel EEG and other large array-based data sets using multi-scale drill-down techniques. Customizable summary views reveal potentially interesting sections of data, which users can explore further by clicking to examine using detailed viewing components. The viewer and a companion browser are built on our MoBBED framework, which has a library of modular viewing components that can be mixed and matched to best reveal structure. Users can easily create new viewers for their specific data without any programming during the exploration process. These viewers automatically support pan, zoom, resizing of individual components, and cursor exploration. The toolbox can be used directly in MATLAB at any stage in a processing pipeline, as a plug-in for EEGLAB, or as a standalone precompiled application without MATLAB running. EEGVIS and its supporting packages are freely available under the GNU general public license at http://visual.cs.utsa.edu/eegvis.

8. COMPUTATIONAL EFFICIENCY OF A MODIFIED SCATTERING KERNEL FOR FULL-COUPLED PHOTON-ELECTRON TRANSPORT PARALLEL COMPUTING WITH UNSTRUCTURED TETRAHEDRAL MESHES

Directory of Open Access Journals (Sweden)

JONG WOON KIM

2014-04-01

In this paper, we introduce a modified scattering kernel approach to avoid the unnecessarily repeated calculations involved with the scattering source calculation, and used it with parallel computing to effectively reduce the computation time. Its computational efficiency was tested for three-dimensional full-coupled photon-electron transport problems using our computer program which solves the multi-group discrete ordinates transport equation by using the discontinuous finite element method with unstructured tetrahedral meshes for complicated geometrical problems. The numerical tests show that we can improve speed up to 17∼42 times for the elapsed time per iteration using the modified scattering kernel, not only in the single CPU calculation but also in the parallel computing with several CPUs.

9. Solving the Coupled System Improves Computational Efficiency of the Bidomain Equations

KAUST Repository

Southern, J.A.

2009-10-01

The bidomain equations are frequently used to model the propagation of cardiac action potentials across cardiac tissue. At the whole organ level, the size of the computational mesh required makes their solution a significant computational challenge. As the accuracy of the numerical solution cannot be compromised, efficiency of the solution technique is important to ensure that the results of the simulation can be obtained in a reasonable time while still encapsulating the complexities of the system. In an attempt to increase efficiency of the solver, the bidomain equations are often decoupled into one parabolic equation that is computationally very cheap to solve and an elliptic equation that is much more expensive to solve. In this study, the performance of this uncoupled solution method is compared with an alternative strategy in which the bidomain equations are solved as a coupled system. This seems counterintuitive as the alternative method requires the solution of a much larger linear system at each time step. However, in tests on two 3-D rabbit ventricle benchmarks, it is shown that the coupled method is up to 80% faster than the conventional uncoupled method-and that parallel performance is better for the larger coupled problem.

10. Solving the Coupled System Improves Computational Efficiency of the Bidomain Equations

KAUST Repository

Southern, J.A.; Plank, G.; Vigmond, E.J.; Whiteley, J.P.

2009-01-01

The bidomain equations are frequently used to model the propagation of cardiac action potentials across cardiac tissue. At the whole organ level, the size of the computational mesh required makes their solution a significant computational challenge. As the accuracy of the numerical solution cannot be compromised, efficiency of the solution technique is important to ensure that the results of the simulation can be obtained in a reasonable time while still encapsulating the complexities of the system. In an attempt to increase efficiency of the solver, the bidomain equations are often decoupled into one parabolic equation that is computationally very cheap to solve and an elliptic equation that is much more expensive to solve. In this study, the performance of this uncoupled solution method is compared with an alternative strategy in which the bidomain equations are solved as a coupled system. This seems counterintuitive as the alternative method requires the solution of a much larger linear system at each time step. However, in tests on two 3-D rabbit ventricle benchmarks, it is shown that the coupled method is up to 80% faster than the conventional uncoupled method-and that parallel performance is better for the larger coupled problem.

11. Computational Approaches to Simulation and Optimization of Global Aircraft Trajectories

Science.gov (United States)

Ng, Hok Kwan; Sridhar, Banavar

2016-01-01

This study examines three possible approaches to improving the speed in generating wind-optimal routes for air traffic at the national or global level. They are: (a) using the resources of a supercomputer, (b) running the computations on multiple commercially available computers and (c) implementing those same algorithms into NASAs Future ATM Concepts Evaluation Tool (FACET) and compares those to a standard implementation run on a single CPU. Wind-optimal aircraft trajectories are computed using global air traffic schedules. The run time and wait time on the supercomputer for trajectory optimization using various numbers of CPUs ranging from 80 to 10,240 units are compared with the total computational time for running the same computation on a single desktop computer and on multiple commercially available computers for potential computational enhancement through parallel processing on the computer clusters. This study also re-implements the trajectory optimization algorithm for further reduction of computational time through algorithm modifications and integrates that with FACET to facilitate the use of the new features which calculate time-optimal routes between worldwide airport pairs in a wind field for use with existing FACET applications. The implementations of trajectory optimization algorithms use MATLAB, Python, and Java programming languages. The performance evaluations are done by comparing their computational efficiencies and based on the potential application of optimized trajectories. The paper shows that in the absence of special privileges on a supercomputer, a cluster of commercially available computers provides a feasible approach for national and global air traffic system studies.

12. Applied Statistics Using SPSS, STATISTICA, MATLAB and R

CERN Document Server

De Sá, Joaquim P Marques

2007-01-01

This practical reference provides a comprehensive introduction and tutorial on the main statistical analysis topics, demonstrating their solution with the most common software package. Intended for anyone needing to apply statistical analysis to a large variety of science and enigineering problems, the book explains and shows how to use SPSS, MATLAB, STATISTICA and R for analysis such as data description, statistical inference, classification and regression, factor analysis, survival data and directional statistics. It concisely explains key concepts and methods, illustrated by practical examp

13. CERR: A computational environment for radiotherapy research

International Nuclear Information System (INIS)

Deasy, Joseph O.; Blanco, Angel I.; Clark, Vanessa H.

2003-01-01

A software environment is described, called the computational environment for radiotherapy research (CERR, pronounced 'sir'). CERR partially addresses four broad needs in treatment planning research: (a) it provides a convenient and powerful software environment to develop and prototype treatment planning concepts, (b) it serves as a software integration environment to combine treatment planning software written in multiple languages (MATLAB, FORTRAN, C/C++, JAVA, etc.), together with treatment plan information (computed tomography scans, outlined structures, dose distributions, digital films, etc.), (c) it provides the ability to extract treatment plans from disparate planning systems using the widely available AAPM/RTOG archiving mechanism, and (d) it provides a convenient and powerful tool for sharing and reproducing treatment planning research results. The functional components currently being distributed, including source code, include: (1) an import program which converts the widely available AAPM/RTOG treatment planning format into a MATLAB cell-array data object, facilitating manipulation; (2) viewers which display axial, coronal, and sagittal computed tomography images, structure contours, digital films, and isodose lines or dose colorwash, (3) a suite of contouring tools to edit and/or create anatomical structures, (4) dose-volume and dose-surface histogram calculation and display tools, and (5) various predefined commands. CERR allows the user to retrieve any AAPM/RTOG key word information about the treatment plan archive. The code is relatively self-describing, because it relies on MATLAB structure field name definitions based on the AAPM/RTOG standard. New structure field names can be added dynamically or permanently. New components of arbitrary data type can be stored and accessed without disturbing system operation. CERR has been applied to aid research in dose-volume-outcome modeling, Monte Carlo dose calculation, and treatment planning optimization

14. Computer-aided modeling framework for efficient model development, analysis and identification

DEFF Research Database (Denmark)

Heitzig, Martina; Sin, Gürkan; Sales Cruz, Mauricio

2011-01-01

Model-based computer aided product-process engineering has attained increased importance in a number of industries, including pharmaceuticals, petrochemicals, fine chemicals, polymers, biotechnology, food, energy, and water. This trend is set to continue due to the substantial benefits computer-aided...... methods introduce. The key prerequisite of computer-aided product-process engineering is however the availability of models of different types, forms, and application modes. The development of the models required for the systems under investigation tends to be a challenging and time-consuming task....... The methodology has been implemented into a computer-aided modeling framework, which combines expert skills, tools, and database connections that are required for the different steps of the model development work-flow with the goal to increase the efficiency of the modeling process. The framework has two main...

15. On the Evaluation of Computational Results Obtained from Solving System of linear Equations With matlab The Dual affine Scalling interior Point

International Nuclear Information System (INIS)

Murfi, Hendri; Basaruddin, T.

2001-01-01

The interior point method for linear programming has gained extraordinary interest as an alternative to simplex method since Karmarkar presented a polynomial-time algorithm for linear programming based on interior point method. In implementation of the algorithm of this method, there are two important things that have impact heavily to performance of the algorithm; they are data structure and used method to solve linear equation system in the algorithm. This paper describes about solving linear equation system in variants of the algorithm called dual-affine scaling algorithm. Next, we evaluate experimentally results of some used methods, either direct method or iterative method. The experimental evaluation used Matlab

16. INTER-INTEGRATED CIRCUIT (I2C SEBAGAI SISTEM KOMUNIKASI MULTI-MIKROKONTROLER MENGGUNAKAN PLATFORM ARDUINO DAN MATLAB

Directory of Open Access Journals (Sweden)

I Nyoman Kusuma Wardana

2016-06-01

Full Text Available Pada aplikasi yang menggunakan mikrokontroler sebagai perangkat utama, pengguna sering dihadapkan pada masalah kurangnya jumlah pin yang tersedia pada suatu mikrokontoler. Terdapat dua alternatif yang dapat dilakukan ketika penggunaan pin menjadi masalah yang krusial, yaitu dengan mengganti jenis mikrokontroler atau menggunakan lebih dari satu buah mikrokontroler (multi-mikrokontroler. Kedua alternatif ini memiliki keunggulan dan kelemahannya masing-masing. Pada penelitian ini, penggunaan protokol Inter-integrated Circuit (I2C akan diterapkan untuk sistem multi-mikrokontroler dan multi-sensor menggunakan Platform Arduino yang terkontrol MATLAB. Sebuah Master dan dua buah slave akan diuji pada penelitian ini. Master dan Slave akan sepenuhnya dikontrol menggunakan MATLAB. Kedua slave akan ditanamkan program Arduino, sedangkan Master akan menggunakan program MATLAB. Hasil dari penelitian ini menunjukkan bahwa kedua Slave dapat dikontrol dengan baik, baik membaca sensor yang terpasang maupun mengontrol LED. Sistem komunikasi secara I2C telah terbangun dengan baik.

17. Calculus Problem Solution And Simulation Using GUI Of Matlab

Directory of Open Access Journals (Sweden)

Syaharuddin

2017-09-01

Full Text Available This research aims to develop the project application in teaching and learning Calculus using Grapichal User Interface GUI of Matlab. The scope of the development result includes 1 PreCalculus 2 Function Limit 3 Derivative and its application and 4 Integral and its application. Every aspect of development is presented according to the standards of material competence learning achievement indicators and solutions or settlement steps on each issue presented. This project application can be used by lecturers and students in universities to improve motivation mastery of material and student learning outcomes in the Calculus course. Development of this project application is done through 4 stages called 4-D namely Define Design Development and Dissemination. Based on the data analysis the results obtained at the validation stage of expert validity level average of 3.575 which means quite valid. Then on a limited trial the average student gave a response of 92.00 which means very good. While in the first field trial the average student gave a response of 89.30 which means very good and in the second field trial the average student gave a responded of 90.15 which means very good. Besides that we also solve computational calculus problems in Edwin J. Purcell Dale Varbergs Book of Volume 1 of Edition 5 of 48 questions that are divided into 64 cases.

18. Improve Data Mining and Knowledge Discovery through the use of MatLab

Science.gov (United States)

Shaykahian, Gholan Ali; Martin, Dawn Elliott; Beil, Robert

2011-01-01

Data mining is widely used to mine business, engineering, and scientific data. Data mining uses pattern based queries, searches, or other analyses of one or more electronic databases/datasets in order to discover or locate a predictive pattern or anomaly indicative of system failure, criminal or terrorist activity, etc. There are various algorithms, techniques and methods used to mine data; including neural networks, genetic algorithms, decision trees, nearest neighbor method, rule induction association analysis, slice and dice, segmentation, and clustering. These algorithms, techniques and methods used to detect patterns in a dataset, have been used in the development of numerous open source and commercially available products and technology for data mining. Data mining is best realized when latent information in a large quantity of data stored is discovered. No one technique solves all data mining problems; challenges are to select algorithms or methods appropriate to strengthen data/text mining and trending within given datasets. In recent years, throughout industry, academia and government agencies, thousands of data systems have been designed and tailored to serve specific engineering and business needs. Many of these systems use databases with relational algebra and structured query language to categorize and retrieve data. In these systems, data analyses are limited and require prior explicit knowledge of metadata and database relations; lacking exploratory data mining and discoveries of latent information. This presentation introduces MatLab(TradeMark)(MATrix LABoratory), an engineering and scientific data analyses tool to perform data mining. MatLab was originally intended to perform purely numerical calculations (a glorified calculator). Now, in addition to having hundreds of mathematical functions, it is a programming language with hundreds built in standard functions and numerous available toolboxes. MatLab's ease of data processing, visualization and

19. Computer vision system in real-time for color determination on flat surface food

Directory of Open Access Journals (Sweden)

Erick Saldaña

2013-03-01

Full Text Available Artificial vision systems also known as computer vision are potent quality inspection tools, which can be applied in pattern recognition for fruits and vegetables analysis. The aim of this research was to design, implement and calibrate a new computer vision system (CVS in real-time for the color measurement on flat surface food. For this purpose was designed and implemented a device capable of performing this task (software and hardware, which consisted of two phases: a image acquisition and b image processing and analysis. Both the algorithm and the graphical interface (GUI were developed in Matlab. The CVS calibration was performed using a conventional colorimeter (Model CIEL* a* b*, where were estimated the errors of the color parameters: eL* = 5.001%, and ea* = 2.287%, and eb* = 4.314 % which ensure adequate and efficient automation application in industrial processes in the quality control in the food industry sector.

20. Computer vision system in real-time for color determination on flat surface food

Directory of Open Access Journals (Sweden)

Erick Saldaña

2013-01-01

Full Text Available Artificial vision systems also known as computer vision are potent quality inspection tools, which can be applied in pattern recognition for fruits and vegetables analysis. The aim of this research was to design, implement and calibrate a new computer vision system (CVS in real - time f or the color measurement on flat surface food. For this purpose was designed and implemented a device capable of performing this task (software and hardware, which consisted of two phases: a image acquisition and b image processing and analysis. Both th e algorithm and the graphical interface (GUI were developed in Matlab. The CVS calibration was performed using a conventional colorimeter (Model CIEL* a* b*, where were estimated the errors of the color parameters: e L* = 5.001%, and e a* = 2.287%, and e b* = 4.314 % which ensure adequate and efficient automation application in industrial processes in the quality control in the food industry sector.

1. Parallel computing solution of Boltzmann neutron transport equation

International Nuclear Information System (INIS)

Ansah-Narh, T.

2010-01-01

The focus of the research was on developing parallel computing algorithm for solving Eigen-values of the Boltzmam Neutron Transport Equation (BNTE) in a slab geometry using multi-grid approach. In response to the problem of slow execution of serial computing when solving large problems, such as BNTE, the study was focused on the design of parallel computing systems which was an evolution of serial computing that used multiple processing elements simultaneously to solve complex physical and mathematical problems. Finite element method (FEM) was used for the spatial discretization scheme, while angular discretization was accomplished by expanding the angular dependence in terms of Legendre polynomials. The eigenvalues representing the multiplication factors in the BNTE were determined by the power method. MATLAB Compiler Version 4.1 (R2009a) was used to compile the MATLAB codes of BNTE. The implemented parallel algorithms were enabled with matlabpool, a Parallel Computing Toolbox function. The option UseParallel was set to 'always' and the default value of the option was 'never'. When those conditions held, the solvers computed estimated gradients in parallel. The parallel computing system was used to handle all the bottlenecks in the matrix generated from the finite element scheme and each domain of the power method generated. The parallel algorithm was implemented on a Symmetric Multi Processor (SMP) cluster machine, which had Intel 32 bit quad-core x 86 processors. Convergence rates and timings for the algorithm on the SMP cluster machine were obtained. Numerical experiments indicated the designed parallel algorithm could reach perfect speedup and had good stability and scalability. (au)

2. VQone MATLAB toolbox: A graphical experiment builder for image and video quality evaluations: VQone MATLAB toolbox.

Science.gov (United States)

Nuutinen, Mikko; Virtanen, Toni; Rummukainen, Olli; Häkkinen, Jukka

2016-03-01

This article presents VQone, a graphical experiment builder, written as a MATLAB toolbox, developed for image and video quality ratings. VQone contains the main elements needed for the subjective image and video quality rating process. This includes building and conducting experiments and data analysis. All functions can be controlled through graphical user interfaces. The experiment builder includes many standardized image and video quality rating methods. Moreover, it enables the creation of new methods or modified versions from standard methods. VQone is distributed free of charge under the terms of the GNU general public license and allows code modifications to be made so that the program's functions can be adjusted according to a user's requirements. VQone is available for download from the project page (http://www.helsinki.fi/psychology/groups/visualcognition/).

3. Coded Modulation in C and MATLAB

Science.gov (United States)

Hamkins, Jon; Andrews, Kenneth S.

2011-01-01

This software, written separately in C and MATLAB as stand-alone packages with equivalent functionality, implements encoders and decoders for a set of nine error-correcting codes and modulators and demodulators for five modulation types. The software can be used as a single program to simulate the performance of such coded modulation. The error-correcting codes implemented are the nine accumulate repeat-4 jagged accumulate (AR4JA) low-density parity-check (LDPC) codes, which have been approved for international standardization by the Consultative Committee for Space Data Systems, and which are scheduled to fly on a series of NASA missions in the Constellation Program. The software implements the encoder and decoder functions, and contains compressed versions of generator and parity-check matrices used in these operations.

4. Secure Computation, I/O-Efficient Algorithms and Distributed Signatures

DEFF Research Database (Denmark)

Damgård, Ivan Bjerre; Kölker, Jonas; Toft, Tomas

2012-01-01

values of form r, gr for random secret-shared r ∈ ℤq and gr in a group of order q. This costs a constant number of exponentiation per player per value generated, even if less than n/3 players are malicious. This can be used for efficient distributed computing of Schnorr signatures. We further develop...... the technique so we can sign secret data in a distributed fashion at essentially the same cost....

5. Introduction to computation and modeling for differential equations

CERN Document Server

Edsberg, Lennart

2008-01-01

An introduction to scientific computing for differential equationsIntroduction to Computation and Modeling for Differential Equations provides a unified and integrated view of numerical analysis, mathematical modeling in applications, and programming to solve differential equations, which is essential in problem-solving across many disciplines, such as engineering, physics, and economics. This book successfully introduces readers to the subject through a unique ""Five-M"" approach: Modeling, Mathematics, Methods, MATLAB, and Multiphysics. This approach facilitates a thorough understanding of h

6. Method to Calculate the Electricity Generated by a Photovoltaic Cell, Based on Its Mathematical Model Simulations in MATLAB

Directory of Open Access Journals (Sweden)

Carlos Morcillo-Herrera

2015-01-01

Full Text Available This paper presents a practical method for calculating the electrical energy generated by a PV panel (kWhr through MATLAB simulations based on the mathematical model of the cell, which obtains the “Mean Maximum Power Point” (MMPP in the characteristic V-P curve, in response to evaluating historical climate data at specific location. This five-step method calculates through MMPP per day, per month, or per year, the power yield by unit area, then electrical energy generated by PV panel, and its real conversion efficiency. To validate the method, it was applied to Sewage Treatment Plant for a Group of Drinking Water and Sewerage of Yucatan (JAPAY, México, testing 250 Wp photovoltaic panels of five different manufacturers. As a result, the performance, the real conversion efficiency, and the electricity generated by five different PV panels in evaluation were obtained and show the best technical-economic option to develop the PV generation project.

7. Wind Turbine Blockset in Matlab/Simulink - General overview and description of the models

Energy Technology Data Exchange (ETDEWEB)

Iov, F.; Hansen, A.D.; Soerensen, P.; Blaabjerg, F.

2004-03-01

This report presents a new developed Matlab/Simulink Toolbox for wind turbine applications. This toolbox has been developed during the research project 'Simulation Platform to model, optimize and design wind turbines' and it has been used as a general developer tool for other three simulation tools: Saber, DIgSILENT, HAWC. The report provides first a quick overview over Matlab issues and then explains the structure of the developed toolbox. The attention in the report is mainly drawn to the description of the most important mathematical models, which have been developed in the Toolbox. Then, some simulation results using the developed models are shown. Finally, some general conclusions regarding this new developed Toolbox as well as some directions for future work are made. (au)

8. Wind turbine blockset in Matlab/Simulink. General overview and description of the models

Energy Technology Data Exchange (ETDEWEB)

Iov, F.; Timbus, A.V.; Hansen, A.D.; Soerensen, P.; Blaabjerg, F.

2004-03-01

This report presents a new developed Matlab/Simulink Toolbox for wind turbine applications. This toolbox has been developed during the research project 'Simulation Platform to model, optimize and design wind turbines' and it has been used as a general developer tool for other three simulation tools: Saber, DIgSILENT, HAWC. The report provides first a quick overview over Matlab issues and then explains the structure of the developed toolbox. The attention in the report is mainly drawn to the description of the most important mathematical models, which have been developed in the Toolbox. Then, some simulation results using the developed models are shown. Finally, some general conclusions regarding this new developed Toolbox as well as some directions for future work are made. (au)

9. Determination of Nuclear Track Parameters for LR-115 Detector by Using of MATLAB Software Technique

International Nuclear Information System (INIS)

AL-Jomaily, F.M.; AL-joburi, H.A.; Mheemeed, A.K.

2013-01-01

The nuclear track detector parameters, such as nuclear track diameter D(μm), number of track N T and area of track A T were determined by using MATLAB software technique for IR-115 detector irradiated by alpha particle from 241 Am source under 1.5, 2.5 and 3.5 MeV at etching time T B of 90, 120, 150 and 180 min.By using the image analysis of MATLAB software for nuclear track, the full width at half maximum FWHM and relative resolution R% were calculated for each energy of alpha particles.In this study, it was shown that increasing the alpha energy on the IR-115 detector leads to increased etching time T B and the dropping of R% to minimum value, and then reach a stable value before dropping at values 1.5, 2.5 MeV and unstable at 3.5 MeV. Imaging analysis by MATLAB technique which used in this study reflect good and accurate results for nuclear track detector parameters and we recommend using this technique for determination of these parameters

10. HAlign-II: efficient ultra-large multiple sequence alignment and phylogenetic tree reconstruction with distributed and parallel computing.

Science.gov (United States)

Wan, Shixiang; Zou, Quan

2017-01-01

Multiple sequence alignment (MSA) plays a key role in biological sequence analyses, especially in phylogenetic tree construction. Extreme increase in next-generation sequencing results in shortage of efficient ultra-large biological sequence alignment approaches for coping with different sequence types. Distributed and parallel computing represents a crucial technique for accelerating ultra-large (e.g. files more than 1 GB) sequence analyses. Based on HAlign and Spark distributed computing system, we implement a highly cost-efficient and time-efficient HAlign-II tool to address ultra-large multiple biological sequence alignment and phylogenetic tree construction. The experiments in the DNA and protein large scale data sets, which are more than 1GB files, showed that HAlign II could save time and space. It outperformed the current software tools. HAlign-II can efficiently carry out MSA and construct phylogenetic trees with ultra-large numbers of biological sequences. HAlign-II shows extremely high memory efficiency and scales well with increases in computing resource. THAlign-II provides a user-friendly web server based on our distributed computing infrastructure. HAlign-II with open-source codes and datasets was established at http://lab.malab.cn/soft/halign.

11. I/O-Efficient Computation of Water Flow Across a Terrain

DEFF Research Database (Denmark)

Arge, Lars Allan; Revsbæk, Morten; Zeh, Norbert

2010-01-01

). We present an I/O-efficient algorithm that solves this problem using O(sort(X) log (X/M) + sort(N)) I/Os, where N is the number of terrain vertices, X is the number of pits of the terrain, sort(N) is the cost of sorting N data items, and M is the size of the computer's main memory. Our algorithm...

12. Efficient Computation of Casimir Interactions between Arbitrary 3D Objects

International Nuclear Information System (INIS)

Reid, M. T. Homer; Rodriguez, Alejandro W.; White, Jacob; Johnson, Steven G.

2009-01-01

We introduce an efficient technique for computing Casimir energies and forces between objects of arbitrarily complex 3D geometries. In contrast to other recently developed methods, our technique easily handles nonspheroidal, nonaxisymmetric objects, and objects with sharp corners. Using our new technique, we obtain the first predictions of Casimir interactions in a number of experimentally relevant geometries, including crossed cylinders and tetrahedral nanoparticles.

13. A strategy for improved computational efficiency of the method of anchored distributions

Science.gov (United States)

Over, Matthew William; Yang, Yarong; Chen, Xingyuan; Rubin, Yoram

2013-06-01

This paper proposes a strategy for improving the computational efficiency of model inversion using the method of anchored distributions (MAD) by "bundling" similar model parametrizations in the likelihood function. Inferring the likelihood function typically requires a large number of forward model (FM) simulations for each possible model parametrization; as a result, the process is quite expensive. To ease this prohibitive cost, we present an approximation for the likelihood function called bundling that relaxes the requirement for high quantities of FM simulations. This approximation redefines the conditional statement of the likelihood function as the probability of a set of similar model parametrizations "bundle" replicating field measurements, which we show is neither a model reduction nor a sampling approach to improving the computational efficiency of model inversion. To evaluate the effectiveness of these modifications, we compare the quality of predictions and computational cost of bundling relative to a baseline MAD inversion of 3-D flow and transport model parameters. Additionally, to aid understanding of the implementation we provide a tutorial for bundling in the form of a sample data set and script for the R statistical computing language. For our synthetic experiment, bundling achieved a 35% reduction in overall computational cost and had a limited negative impact on predicted probability distributions of the model parameters. Strategies for minimizing error in the bundling approximation, for enforcing similarity among the sets of model parametrizations, and for identifying convergence of the likelihood function are also presented.

14. Computationally efficient implementation of combustion chemistry in parallel PDF calculations

International Nuclear Information System (INIS)

Lu Liuyan; Lantz, Steven R.; Ren Zhuyin; Pope, Stephen B.

2009-01-01

In parallel calculations of combustion processes with realistic chemistry, the serial in situ adaptive tabulation (ISAT) algorithm [S.B. Pope, Computationally efficient implementation of combustion chemistry using in situ adaptive tabulation, Combustion Theory and Modelling, 1 (1997) 41-63; L. Lu, S.B. Pope, An improved algorithm for in situ adaptive tabulation, Journal of Computational Physics 228 (2009) 361-386] substantially speeds up the chemistry calculations on each processor. To improve the parallel efficiency of large ensembles of such calculations in parallel computations, in this work, the ISAT algorithm is extended to the multi-processor environment, with the aim of minimizing the wall clock time required for the whole ensemble. Parallel ISAT strategies are developed by combining the existing serial ISAT algorithm with different distribution strategies, namely purely local processing (PLP), uniformly random distribution (URAN), and preferential distribution (PREF). The distribution strategies enable the queued load redistribution of chemistry calculations among processors using message passing. They are implemented in the software x2f m pi, which is a Fortran 95 library for facilitating many parallel evaluations of a general vector function. The relative performance of the parallel ISAT strategies is investigated in different computational regimes via the PDF calculations of multiple partially stirred reactors burning methane/air mixtures. The results show that the performance of ISAT with a fixed distribution strategy strongly depends on certain computational regimes, based on how much memory is available and how much overlap exists between tabulated information on different processors. No one fixed strategy consistently achieves good performance in all the regimes. Therefore, an adaptive distribution strategy, which blends PLP, URAN and PREF, is devised and implemented. It yields consistently good performance in all regimes. In the adaptive parallel

15. The method in γ spectrum analysis with artificial neural network based on MATLAB

International Nuclear Information System (INIS)

Bai Lixin; Zhang Yiyun; Xu Jiayun; Wu Liping

2003-01-01

Analyzing γ spectrum with artificial neural network have the advantage of using the information of whole spectrum and having high analyzing precision. A convenient realization based on MATLAB was present in this

16. ADAMS-MATLAB Co-Simulation of A Serial Manipulator

Directory of Open Access Journals (Sweden)

Parthasarathy Tejaswin

2017-01-01

Full Text Available This paper presents the dynamic modelling and simulation of a now redundant robot, Mitsubishi RM-501, and proposes a general algorithm for experimental simulation in kinematics, dynamics and control analysis to any such robot. Through reverse engineering, a model as accurate as the real robot was developed in SolidWorks.The simulations of the same were performed in ADAMS (dynamicmodeling software offered by MSC Software Corpalong with MATLAB for motion studies and control dynamics. Finally, with a user-input path the accuracy and precision of the simulator was verified.

17. PEM fuel cell modeling and simulation using Matlab

CERN Document Server

Spiegel, Colleen

2011-01-01

Although, the basic concept of a fuel cell is quite simple, creating new designs and optimizing their performance takes serious work and a mastery of several technical areas. PEM Fuel Cell Modeling and Simulation Using Matlab, provides design engineers and researchers with a valuable tool for understanding and overcoming barriers to designing and building the next generation of PEM Fuel Cells. With this book, engineers can test components and verify designs in the development phase, saving both time and money.Easy to read and understand, this book provides design and modelling tips for

18. Geospatial and temporal patterns of annual cholera outbreaks in Matlab, Bangladesh

Science.gov (United States)

Majumder, M. S.; de Klerk, K.; Meyers, D.

2012-12-01

Cholera is a waterborne diarrheal disease endemic to Bangladesh, resulting in 1 million diagnoses annually. Such disease burden results in incalculable lost wages and treatment expenses, taken from the pockets of an already impoverished society. Two seasonally correlated outbreaks of cholera occur in Bangladesh every year. In the spring and early summer, the Bay of Bengal - which serves as a natural reservoir for the cholera bacteria - flows inland, causing the first outbreak amongst coastal communities. Waste containing the cholera bacteria enters the sewage system and remains untreated due to poor water and sanitation infrastructure. Therefore, during the following monsoon season, flooding of cholera-contaminated sewage into drinking water sources results in a second outbreak. Though considered common knowledge among local populations, this geographic and temporal progression has not been empirically verified in the current literature. The aim of our ongoing study is to systematically analyze the seasonal trajectory of endemic cholera in Bangladesh. This paper discusses the results obtained from a comprehensive survey of available cholera data from the International Centre of Diarrheal Disease Research, Bangladesh (ICDDR,B) in Matlab, Bangladesh. Matlab thana is a near-coastal community that consists of 142 villages. Monsoon season takes place from June through October. Due to its proximity to the Meghna River, which opens into the Bay of Bengal, the area experiences significant flooding during these months. Using 10 years of geographically referenced cholera data, cases were plotted in time and space. Preliminary patterns suggest that villages closer to the Meghna River experience the majority of the area's cholera outbreaks and that case count is highest in late spring and late fall. April/May and November/December represent 25% and 23% of total annual case counts respectively. Moreover, villages further from the coastline demonstrate 57% higher relative

19. An efficient algorithm to compute subsets of points in ℤ n

OpenAIRE

Pacheco Martínez, Ana María; Real Jurado, Pedro

2012-01-01

In this paper we show a more efficient algorithm than that in [8] to compute subsets of points non-congruent by isometries. This algorithm can be used to reconstruct the object from the digital image. Both algorithms are compared, highlighting the improvements obtained in terms of CPU time.

20. A Parallel Controls Software Approach for PEP II: AIDA and Matlab Middle Layer

International Nuclear Information System (INIS)

Wittmer, W.; Colocho, W.; White, G.

2007-01-01

The controls software in use at PEP II (Stanford Control Program - SCP) had originally been developed in the eighties. It is very successful in routine operation but due to its internal structure it is difficult and time consuming to extend its functionality. This is problematic during machine development and when solving operational issues. Routinely, data has to be exported from the system, analyzed offline, and calculated settings have to be reimported. Since this is a manual process, it is time consuming and error-prone. Setting up automated processes, as is done for MIA (Model Independent Analysis), is also time consuming and specific to each application. Recently, there has been a trend at light sources to use MATLAB as the platform to control accelerators using a 'MATLAB Middle Layer' (MML), and so called channel access (CA) programs to communicate with the low level control system (LLCS). This has proven very successful, especially during machine development time and trouble shooting. A special CA code, named AIDA (Accelerator Independent Data Access), was developed to handle the communication between MATLAB, modern software frameworks, and the SCP. The MML had to be adapted for implementation at PEP II. Colliders differ significantly in their designs compared to light sources, which poses a challenge. PEP II is the first collider at which this implementation is being done. We will report on this effort, which is still ongoing

1. Computer Simulation of Nonuniform MTLs via Implicit Wendroff and State-Variable Methods

Directory of Open Access Journals (Sweden)

L. Brancik

2011-04-01

Full Text Available The paper deals with techniques for a computer simulation of nonuniform multiconductor transmission lines (MTLs based on the implicit Wendroff and the statevariable methods. The techniques fall into a class of finitedifference time-domain (FDTD methods useful to solve various electromagnetic systems. Their basic variants are extended and modified to enable solving both voltage and current distributions along nonuniform MTL’s wires and their sensitivities with respect to lumped and distributed parameters. An experimental error analysis is performed based on the Thomson cable whose analytical solutions are known, and some examples of simulation of both uniform and nonuniform MTLs are presented. Based on the Matlab language programme, CPU times are analyzed to compare efficiency of the methods. Some results for nonlinear MTLs simulation are presented as well.

2. Optimizing Inductor Winding Geometry for Lowest DC-Resistance using LiveLink between COMSOL and MATLAB

DEFF Research Database (Denmark)

Schneider, Henrik; Andersen, Thomas; Mønster, Jakob Døllner

2013-01-01

An optimization routine is presented to optimize a hybrid winding geometry for a toroid inductor in terms of the DC resistance. The hybrid winding geometry consist of bended foil pieces connected through traces in a printed circuit board. MATLAB is used to create a graphical user interface...... that visually plots the winding using input parameters such as core dimensions, number of turns, clearance between windings, and the winding angle of each segment of the winding. COMSOL LiveLink is used to import the winding geometry from MATLAB and create a 2D finite element model to simulate the DC...

3. An Open-source Toolbox for Analysing and Processing PhysioNet Databases in MATLAB and Octave.

Science.gov (United States)

Silva, Ikaro; Moody, George B

The WaveForm DataBase (WFDB) Toolbox for MATLAB/Octave enables integrated access to PhysioNet's software and databases. Using the WFDB Toolbox for MATLAB/Octave, users have access to over 50 physiological databases in PhysioNet. The toolbox provides access over 4 TB of biomedical signals including ECG, EEG, EMG, and PLETH. Additionally, most signals are accompanied by metadata such as medical annotations of clinical events: arrhythmias, sleep stages, seizures, hypotensive episodes, etc. Users of this toolbox should easily be able to reproduce, validate, and compare results published based on PhysioNet's software and databases.

4. Quantum Computing and the Limits of the Efficiently Computable

CERN Multimedia

CERN. Geneva

2015-01-01

I'll discuss how computational complexity---the study of what can and can't be feasibly computed---has been interacting with physics in interesting and unexpected ways. I'll first give a crash course about computer science's P vs. NP problem, as well as about the capabilities and limits of quantum computers. I'll then touch on speculative models of computation that would go even beyond quantum computers, using (for example) hypothetical nonlinearities in the Schrodinger equation. Finally, I'll discuss BosonSampling ---a proposal for a simple form of quantum computing, which nevertheless seems intractable to simulate using a classical computer---as well as the role of computational complexity in the black hole information puzzle.

5. Reflection curvesÃ‚Â—new computation and rendering techniques

Directory of Open Access Journals (Sweden)

Dan-Eugen Ulmet

2004-05-01

Full Text Available Reflection curves on surfaces are important tools for free-form surface interrogation. They are essential for industrial 3D CAD/CAM systems and for rendering purposes. In this note, new approaches regarding the computation and rendering of reflection curves on surfaces are introduced. These approaches are designed to take the advantage of the graphics libraries of recent releases of commercial systems such as the OpenInventor toolkit (developed by Silicon Graphics or Matlab (developed by The Math Works. A new relation between reflection curves and contour curves is derived; this theoretical result is used for a straightforward Matlab implementation of reflection curves. A new type of reflection curves is also generated using the OpenInventor texture and environment mapping implementations. This allows the computation, rendering, and animation of reflection curves at interactive rates, which makes it particularly useful for industrial applications.

DEFF Research Database (Denmark)

Rosen, Christian; Vrecko, Darko; Gernaey, Krist

2006-01-01

, in particular if the ADM1 is to be included in dynamic simulations of plant-wide or even integrated systems. In this paper, the experiences gained from a Matlab/Simulink implementation of ADM1 into the extended COST/IWA Benchmark Simulation Model (BSM2) are presented. Aspects related to system stiffness, model...

7. Mehrkörpersimulation eines ebenen Koppelgetriebes mittels Matlab / ADAMS -Co-Simulation

OpenAIRE

Gollee, Christian; Troll, Clemens

2017-01-01

Mit Hilfe der Matlab/ADAMS-Co-Simulation wird ein ebenes Koppelgetriebe (5- Gelenk) untersucht und anschließend die Wirkpaarung mit einem Stückgut betrachtet. Dabei werden verschiedene Modellierungsstufen angewendet und die Simulationsergebnisse Messergebnissen vom Versuchsstand gegenübergestellt. Daneben wird die grundlegende Herangehensweise beim Einsatz dieser Simulationswerkzeuge erläutert.

8. The Application of PSIM & Matlab/ Simulink in Teaching of Power Electronics Courses

Directory of Open Access Journals (Sweden)

2011-07-01

Full Text Available This paper presents a comparison analysis between two engineering software platforms, Matlab/Simulink & PSIM, which are used as major educational tools in teaching of power electronics and electrical drive courses, in additional to conducted research in these fields. The comparison analysis is based on studying the design simplicity of the module, time consumed in building of the module, accuracy, functionality, simulation time, and the acceptability of obtained results. Various power electronic simulation circuits are illustrated and the results are processed and displayed. The simulation results states that Matlab/Simulink is a suitable platform for control and regulation of simulation processes, in additional to its dominant role in conducting research tasks. Conversely, PSIM is dedicated to power electronic circuits and machine simulation tasks with fast and robust algorithms and suitable for educational purposes. It is recommended that both packages can be used in teaching power electronics courses.

9. Efficient implementation of multidimensional fast fourier transform on a distributed-memory parallel multi-node computer

Science.gov (United States)

Bhanot, Gyan V [Princeton, NJ; Chen, Dong [Croton-On-Hudson, NY; Gara, Alan G [Mount Kisco, NY; Giampapa, Mark E [Irvington, NY; Heidelberger, Philip [Cortlandt Manor, NY; Steinmacher-Burow, Burkhard D [Mount Kisco, NY; Vranas, Pavlos M [Bedford Hills, NY

2012-01-10

The present in invention is directed to a method, system and program storage device for efficiently implementing a multidimensional Fast Fourier Transform (FFT) of a multidimensional array comprising a plurality of elements initially distributed in a multi-node computer system comprising a plurality of nodes in communication over a network, comprising: distributing the plurality of elements of the array in a first dimension across the plurality of nodes of the computer system over the network to facilitate a first one-dimensional FFT; performing the first one-dimensional FFT on the elements of the array distributed at each node in the first dimension; re-distributing the one-dimensional FFT-transformed elements at each node in a second dimension via "all-to-all" distribution in random order across other nodes of the computer system over the network; and performing a second one-dimensional FFT on elements of the array re-distributed at each node in the second dimension, wherein the random order facilitates efficient utilization of the network thereby efficiently implementing the multidimensional FFT. The "all-to-all" re-distribution of array elements is further efficiently implemented in applications other than the multidimensional FFT on the distributed-memory parallel supercomputer.

10. Model of a photovoltaic panel emulator in MATLAB-Simulink

OpenAIRE

CAN, Hayrettin

2014-01-01

Being able to behave electrically similar to photovoltaic (PV) panels, PV emulator systems make it possible to perform different PV system tests under various operation conditions. In this paper, a model of a PV panel emulator is presented using the Power System Blockset under MATLAB-Simulink. The simulation of the emulator system is developed for testing a controller prior to a real-time implementation. The model can handle the dependence of all of the parameters in the model with ...

11. Introduction to Artificial Vision through Laboratory Guides Using Matlab

OpenAIRE

Verónica Londoño-Osorio; Jhovana Marín-Pineda; Eliana I. Arango-Zuluaga

2013-01-01

This paper presents the design of two laboratory guides in artificial vision for a course which aims to introduce students to the different areas of specialization of his career. Therefore, the designed practices motivate and provide relevant content to the student, and to encourage research in the area of image processing. The first guide presents an introductory practice that explores the basic commands for image processing by programming a GUI in Matlab, and a second practice in which you ...

12. Efficient Skyline Computation in Structured Peer-to-Peer Systems

DEFF Research Database (Denmark)

Cui, Bin; Chen, Lijiang; Xu, Linhao

2009-01-01

An increasing number of large-scale applications exploit peer-to-peer network architecture to provide highly scalable and flexible services. Among these applications, data management in peer-to-peer systems is one of the interesting domains. In this paper, we investigate the multidimensional...... skyline computation problem on a structured peer-to-peer network. In order to achieve low communication cost and quick response time, we utilize the iMinMax(\\theta ) method to transform high-dimensional data to one-dimensional value and distribute the data in a structured peer-to-peer network called BATON....... Thereafter, we propose a progressive algorithm with adaptive filter technique for efficient skyline computation in this environment. We further discuss some optimization techniques for the algorithm, and summarize the key principles of our algorithm into a query routing protocol with detailed analysis...

13. Optimization analysis of propulsion motor control efficiency

Directory of Open Access Journals (Sweden)

CAI Qingnan

2017-12-01

Full Text Available [Objectives] This paper aims to strengthen the control effect of propulsion motors and decrease the energy used during actual control procedures.[Methods] Based on the traditional propulsion motor equivalence circuit, we increase the iron loss current component, introduce the definition of power matching ratio, calculate the highest efficiency of a motor at a given speed and discuss the flux corresponding to the power matching ratio with the highest efficiency. In the original motor vector efficiency optimization control module, an efficiency optimization control module is added so as to achieve motor efficiency optimization and energy conservation.[Results] MATLAB/Simulink simulation data shows that the efficiency optimization control method is suitable for most conditions. The operation efficiency of the improved motor model is significantly higher than that of the original motor model, and its dynamic performance is good.[Conclusions] Our motor efficiency optimization control method can be applied in engineering to achieve energy conservation.

14. Developing a computationally efficient dynamic multilevel hybrid optimization scheme using multifidelity model interactions.

Energy Technology Data Exchange (ETDEWEB)

Hough, Patricia Diane (Sandia National Laboratories, Livermore, CA); Gray, Genetha Anne (Sandia National Laboratories, Livermore, CA); Castro, Joseph Pete Jr. (; .); Giunta, Anthony Andrew

2006-01-01

Many engineering application problems use optimization algorithms in conjunction with numerical simulators to search for solutions. The formulation of relevant objective functions and constraints dictate possible optimization algorithms. Often, a gradient based approach is not possible since objective functions and constraints can be nonlinear, nonconvex, non-differentiable, or even discontinuous and the simulations involved can be computationally expensive. Moreover, computational efficiency and accuracy are desirable and also influence the choice of solution method. With the advent and increasing availability of massively parallel computers, computational speed has increased tremendously. Unfortunately, the numerical and model complexities of many problems still demand significant computational resources. Moreover, in optimization, these expenses can be a limiting factor since obtaining solutions often requires the completion of numerous computationally intensive simulations. Therefore, we propose a multifidelity optimization algorithm (MFO) designed to improve the computational efficiency of an optimization method for a wide range of applications. In developing the MFO algorithm, we take advantage of the interactions between multi fidelity models to develop a dynamic and computational time saving optimization algorithm. First, a direct search method is applied to the high fidelity model over a reduced design space. In conjunction with this search, a specialized oracle is employed to map the design space of this high fidelity model to that of a computationally cheaper low fidelity model using space mapping techniques. Then, in the low fidelity space, an optimum is obtained using gradient or non-gradient based optimization, and it is mapped back to the high fidelity space. In this paper, we describe the theory and implementation details of our MFO algorithm. We also demonstrate our MFO method on some example problems and on two applications: earth penetrators and

15. Implementation of PID Controller in MATLAB for Real Time DC Motor Speed Control System

Directory of Open Access Journals (Sweden)

Manjunatha Reddy H. K.

2011-03-01

Full Text Available In this paper the implementation of PIDC (proportional + integral + derivative controller in MATLAB environment for real time DC motor speed control is presented. The MATLAB environment is chosen because of availability of tool boxes which allows the effective way of implementation and analysis of the control system. The performance of PID controller for different inputs is studied. To establish a communication between PC and process parameter, an indigenous Analog to digital and digital to analog (AD-DA board is designed. This board consists of 12-bit A/D converter and 12-bit D/A converter to facilitate the data acquisition and control. In the present study Advantech make PCI-1751 DIOT card is used to interface AD-DA board to PC externally. The data between the AD-DA board and the PC is communicated through the script file written in MATLAB environment. By applying different standard test commands such as step, square, staircase and triangular, the performance of PID controller is studied. The PID controller provides better system response in terms of transient as well as steady-state performances. The controller parameters are manually tuned (kp=0.232, ki=0.078 and kd=0.035 and the results of the best tuned PID controller are presented.

16. Investigating the Multi-memetic Mind Evolutionary Computation Algorithm Efficiency

Directory of Open Access Journals (Sweden)

M. K. Sakharov

2017-01-01

Full Text Available In solving practically significant problems of global optimization, the objective function is often of high dimensionality and computational complexity and of nontrivial landscape as well. Studies show that often one optimization method is not enough for solving such problems efficiently - hybridization of several optimization methods is necessary.One of the most promising contemporary trends in this field are memetic algorithms (MA, which can be viewed as a combination of the population-based search for a global optimum and the procedures for a local refinement of solutions (memes, provided by a synergy. Since there are relatively few theoretical studies concerning the MA configuration, which is advisable for use to solve the black-box optimization problems, many researchers tend just to adaptive algorithms, which for search select the most efficient methods of local optimization for the certain domains of the search space.The article proposes a multi-memetic modification of a simple SMEC algorithm, using random hyper-heuristics. Presents the software algorithm and memes used (Nelder-Mead method, method of random hyper-sphere surface search, Hooke-Jeeves method. Conducts a comparative study of the efficiency of the proposed algorithm depending on the set and the number of memes. The study has been carried out using Rastrigin, Rosenbrock, and Zakharov multidimensional test functions. Computational experiments have been carried out for all possible combinations of memes and for each meme individually.According to results of study, conducted by the multi-start method, the combinations of memes, comprising the Hooke-Jeeves method, were successful. These results prove a rapid convergence of the method to a local optimum in comparison with other memes, since all methods perform the fixed number of iterations at the most.The analysis of the average number of iterations shows that using the most efficient sets of memes allows us to find the optimal

17. Visualizing the inner product space ℝm×n in a MATLAB-assisted linear algebra classroom

Science.gov (United States)

Caglayan, Günhan

2018-05-01

This linear algebra note offers teaching and learning ideas in the treatment of the inner product space ? in a technology-supported learning environment. Classroom activities proposed in this note demonstrate creative ways of integrating MATLAB technology into various properties of Frobenius inner product as visualization tools that complement the algebraic approach. As implemented in linear algebra lessons in a university in the Unites States, the article also incorporates algebraic and visual work of students who experienced these activities with MATLAB software. The connection between the Frobenius norm and the Euclidean norm is also emphasized.

Science.gov (United States)

Enin, S. S.; Omelchenko, E. Y.; Fomin, N. V.; Beliy, A. V.

2018-03-01

The paper has a description of a computer model of an overhead crane system. The designed overhead crane system consists of hoisting, trolley and crane mechanisms as well as a payload two-axis system. With the help of the differential equation of specified mechanisms movement derived through Lagrange equation of the II kind, it is possible to build an overhead crane computer model. The computer model was obtained using Matlab software. Transients of coordinate, linear speed and motor torque of trolley and crane mechanism systems were simulated. In addition, transients of payload swaying were obtained with respect to the vertical axis. A trajectory of the trolley mechanism with simultaneous operation with the crane mechanism is represented in the paper as well as a two-axis trajectory of payload. The designed computer model of an overhead crane is a great means for studying positioning control and anti-sway control systems.

19. Bayesian Spatial Design of Optimal Deep Tubewell Locations in Matlab, Bangladesh.

Science.gov (United States)

Warren, Joshua L; Perez-Heydrich, Carolina; Yunus, Mohammad

2013-09-01

We introduce a method for statistically identifying the optimal locations of deep tubewells (dtws) to be installed in Matlab, Bangladesh. Dtw installations serve to mitigate exposure to naturally occurring arsenic found at groundwater depths less than 200 meters, a serious environmental health threat for the population of Bangladesh. We introduce an objective function, which incorporates both arsenic level and nearest town population size, to identify optimal locations for dtw placement. Assuming complete knowledge of the arsenic surface, we then demonstrate how minimizing the objective function over a domain favors dtws placed in areas with high arsenic values and close to largely populated regions. Given only a partial realization of the arsenic surface over a domain, we use a Bayesian spatial statistical model to predict the full arsenic surface and estimate the optimal dtw locations. The uncertainty associated with these estimated locations is correctly characterized as well. The new method is applied to a dataset from a village in Matlab and the estimated optimal locations are analyzed along with their respective 95% credible regions.

20. A Cloud Computing-Enabled Spatio-Temporal Cyber-Physical Information Infrastructure for Efficient Soil Moisture Monitoring

Directory of Open Access Journals (Sweden)

Lianjie Zhou

2016-06-01

Full Text Available Comprehensive surface soil moisture (SM monitoring is a vital task in precision agriculture applications. SM monitoring includes remote sensing imagery monitoring and in situ sensor-based observational monitoring. Cloud computing can increase computational efficiency enormously. A geographical web service was developed to assist in agronomic decision making, and this tool can be scaled to any location and crop. By integrating cloud computing and the web service-enabled information infrastructure, this study uses the cloud computing-enabled spatio-temporal cyber-physical infrastructure (CESCI to provide an efficient solution for soil moisture monitoring in precision agriculture. On the server side of CESCI, diverse Open Geospatial Consortium web services work closely with each other. Hubei Province, located on the Jianghan Plain in central China, is selected as the remote sensing study area in the experiment. The Baoxie scientific experimental field in Wuhan City is selected as the in situ sensor study area. The results show that the proposed method enhances the efficiency of remote sensing imagery mapping and in situ soil moisture interpolation. In addition, the proposed method is compared to other existing precision agriculture infrastructures. In this comparison, the proposed infrastructure performs soil moisture mapping in Hubei Province in 1.4 min and near real-time in situ soil moisture interpolation in an efficient manner. Moreover, an enhanced performance monitoring method can help to reduce costs in precision agriculture monitoring, as well as increasing agricultural productivity and farmers’ net-income.