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Sample records for dissimilatory arsenate reduction

  1. Dissimilatory metal reduction.

    Science.gov (United States)

    Lovley, D R

    1993-01-01

    Microorganisms can enzymatically reduce a variety of metals in metabolic processes that are not related to metal assimilation. Some microorganisms can conserve energy to support growth by coupling the oxidation of simple organic acids and alcohols, H2, or aromatic compounds to the reduction of Fe(III) or Mn(IV). This dissimilatory Fe(III) and Mn(IV) reduction influences the organic as well as the inorganic geochemistry of anaerobic aquatic sediments and ground water. Microorganisms that use U(VI) as a terminal electron acceptor play an important role in uranium geochemistry and may be a useful tool for removing uranium from contaminated environments. Se(VI) serves as a terminal electron acceptor to support anaerobic growth of some microorganisms. Reduction of Se(VI) to Se(O) is an important mechanism for the precipitation of selenium from contaminated waters. Enzymatic reduction of Cr(VI) to the less mobile and less toxic Cr(III), and reduction of soluble Hg(II) to volatile Hg(O) may affect the fate of these compounds in the environment and might be used as a remediation strategy. Microorganisms can also enzymatically reduce other metals such as technetium, vanadium, molybdenum, gold, silver, and copper, but reduction of these metals has not been studied extensively.

  2. Dissolution of Arsenic Minerals Mediated by Dissimilatory Arsenate Reducing Bacteria: Estimation of the Physiological Potential for Arsenic Mobilization

    Directory of Open Access Journals (Sweden)

    Drewniak Lukasz

    2014-01-01

    Full Text Available The aim of this study was characterization of the isolated dissimilatory arsenate reducing bacteria in the context of their potential for arsenic removal from primary arsenic minerals through reductive dissolution. Four strains, Shewanella sp. OM1, Pseudomonas sp. OM2, Aeromonas sp. OM4, and Serratia sp. OM17, capable of anaerobic growth with As (V reduction, were isolated from microbial mats from an ancient gold mine. All of the isolated strains: (i produced siderophores that promote dissolution of minerals, (ii were resistant to dissolved arsenic compounds, (iii were able to use the dissolved arsenates as the terminal electron acceptor, and (iii were able to use copper minerals containing arsenic minerals (e.g., enargite as a respiratory substrate. Based on the results obtained in this study, we postulate that arsenic can be released from some As-bearing polymetallic minerals (such as copper ore concentrates or middlings under reductive conditions by dissimilatory arsenate reducers in indirect processes.

  3. Dissolution of arsenic minerals mediated by dissimilatory arsenate reducing bacteria: estimation of the physiological potential for arsenic mobilization.

    Science.gov (United States)

    Lukasz, Drewniak; Liwia, Rajpert; Aleksandra, Mantur; Aleksandra, Sklodowska

    2014-01-01

    The aim of this study was characterization of the isolated dissimilatory arsenate reducing bacteria in the context of their potential for arsenic removal from primary arsenic minerals through reductive dissolution. Four strains, Shewanella sp. OM1, Pseudomonas sp. OM2, Aeromonas sp. OM4, and Serratia sp. OM17, capable of anaerobic growth with As (V) reduction, were isolated from microbial mats from an ancient gold mine. All of the isolated strains: (i) produced siderophores that promote dissolution of minerals, (ii) were resistant to dissolved arsenic compounds, (iii) were able to use the dissolved arsenates as the terminal electron acceptor, and (iii) were able to use copper minerals containing arsenic minerals (e.g., enargite) as a respiratory substrate. Based on the results obtained in this study, we postulate that arsenic can be released from some As-bearing polymetallic minerals (such as copper ore concentrates or middlings) under reductive conditions by dissimilatory arsenate reducers in indirect processes.

  4. Arsenic dissolution from Japanese paddy soil by a dissimilatory arsenate-reducing bacterium Geobacter sp. OR-1.

    Science.gov (United States)

    Ohtsuka, Toshihiko; Yamaguchi, Noriko; Makino, Tomoyuki; Sakurai, Kazuhiro; Kimura, Kenta; Kudo, Keitaro; Homma, Eri; Dong, Dian Tao; Amachi, Seigo

    2013-06-18

    Dissimilatory As(V) (arsenate)-reducing bacteria may play an important role in arsenic release from anoxic sediments in the form of As(III) (arsenite). Although respiratory arsenate reductase genes (arrA) closely related to Geobacter species have been frequently detected in arsenic-rich sediments, it is still unclear whether they directly participate in arsenic release, mainly due to lack of pure cultures capable of arsenate reduction. In this study, we isolated a novel dissimilatory arsenate-reducing bacterium, strain OR-1, from Japanese paddy soil, and found that it was phylogenetically closely related to Geobacter pelophilus. OR-1 also utilized soluble Fe(III), ferrihydrite, nitrate, and fumarate as electron acceptors. OR-1 catalyzed dissolution of arsenic from arsenate-adsorbed ferrihydrite, while Geobacter metallireducens GS-15 did not. Furthermore, inoculation of washed cells of OR-1 into sterilized paddy soil successfully restored arsenic release. Arsenic K-edge X-ray absorption near-edge structure analysis revealed that strain OR-1 reduced arsenate directly on the soil solid phase. Analysis of putative ArrA sequences from paddy soils suggested that Geobacter-related bacteria, including those closely related to OR-1, play an important role in arsenic release from paddy soils. Our results provide direct evidence for arsenic dissolution by Geobacter species and support the hypothesis that Geobacter species play a significant role in reduction and mobilization of arsenic in flooded soils and anoxic sediments.

  5. Slurry bioreactor modeling using a dissimilatory arsenate-reducing bacterium for remediation of arsenic-contaminated soil.

    Science.gov (United States)

    Soda, Satoshi; Kanzaki, Masaya; Yamamuara, Shigeki; Kashiwa, Masami; Fujita, Masanori; Ike, Michihiko

    2009-02-01

    A slurry bioreactor using a dissimilatory arsenate (As(V))-reducing bacterium is proposed for remediation of arsenic-contaminated soils. Bacterial As(V) reduction can cause arsenic extraction from the solid to the liquid phase because arsenite, As(III), is much less adsorptive than As(V). A mathematical model was developed incorporating the reversible sorption process of arsenic as well as bacterial growth and decay via As(V) reduction. A linear isotherm equation expressed the sorption process. The model included Haldane kinetics with high As(V) concentrations and cell inactivation by toxicity due to As(III). Extraction experiments used synthetic contaminated soils (forest soil, Soil SF, 1100 mg kg(-1); paddy soil, Soil SP, 1100 mg kg(-1)) and actual contaminated soils (Soil AH 2200 mg kg(-1) and Soil AL, 220 mg kg(-1)) at 5% w/v slurry concentration. Simulation results matched the observed changes of arsenic concentrations in the liquid phase. The respective extraction efficiencies of arsenic were 63%, 41%, 20%, and 55% for SF, SP, AH, and AL soils. Sensitivity analyses showed that the rate-limiting step was the desorption rate of As(V) from the solid to the liquid phase, rather than the As(V)-reducing rate. The proposed model provides a useful framework for understanding and predicting the extraction of arsenic from soil.

  6. Characterization of microbial arsenate reduction in the anoxic bottom waters of Mono Lake, California

    Science.gov (United States)

    Hoeft, S.E.; Lucas, F.; Hollibaugh, J.T.; Oremland, R.S.

    2002-01-01

    Dissimilatory reduction of arsenate (DAsR) occurs in the arsenic-rich, anoxic water column of Mono Lake, California, yet the microorganisms responsible for this observed in situ activity have not been identified. To gain insight as to which microorganisms mediate this phenomenon, as well as to some of the biogeochemical constraints on this activity, we conducted incubations of arsenate-enriched bottom water coupled with inhibition/amendment studies and Denaturing Gradient Gel Electrophoresis (DGGE) characterization techniques. DAsR was totally inhibited by filter-sterilization and by nitrate, partially inhibited (~50%) by selenate, but only slightly (~25%) inhibited by oxyanions that block sulfate-reduction (molybdate and tungstate). The apparent inhibition by nitrate, however, was not due to action as a preferred electron acceptor to arsenate. Rather, nitrate addition caused a rapid, microbial re-oxidation of arsenite to arsenate, which gave the overall appearance of no arsenate loss. A similar microbial oxidation of As(III) was also found with Fe(III), a fact that has implications for the recycling of As(V) in Mono Lake's anoxic bottom waters. DAsR could be slightly (10%) stimulated by substrate amendments of lactate, succinate, malate, or glucose, but not by acetate, suggesting that the DAsR microflora is not electron donor limited. DGGE analysis of amplified 16S rDNA gene fragments from incubated arsenate-enriched bottom waters revealed the presence of two bands that were not present in controls without added arsenate. The resolved sequences of these excised bands indicated the presence of members of the epsilon (Sulfurospirillum) and delta (Desulfovibrio) subgroups of the Proteobacteria, both of which have representative species that are capable of anaerobic growth using arsenate as their electron acceptor.

  7. Nitrate storage and dissimilatory nitrate reduction by eukaryotic microbes

    DEFF Research Database (Denmark)

    Kamp, Anja; Høgslund, Signe; Risgaard-Petersen, Nils;

    2015-01-01

    The microbial nitrogen cycle is one of the most complex and environmentally important element cycles on Earth and has long been thought to be mediated exclusively by prokaryotic microbes. Rather recently, it was discovered that certain eukaryotic microbes are able to store nitrate intracellularly...... and use it for dissimilatory nitrate reduction in the absence of oxygen. The paradigm shift that this entailed is ecologically significant because the eukaryotes in question comprise global players like diatoms, foraminifers, and fungi. This review article provides an unprecedented overview of nitrate...... storage and dissimilatory nitrate reduction by diverse marine eukaryotes placed into an eco-physiological context. The advantage of intracellular nitrate storage for anaerobic energy conservation in oxygen-depleted habitats is explained and the life style enabled by this metabolic trait is described...

  8. Nitrate storage and dissimilatory nitrate reduction by eukaryotic microbes

    DEFF Research Database (Denmark)

    Kamp, Anja; Høgslund, Signe; Risgaard-Petersen, Nils

    2015-01-01

    and use it for dissimilatory nitrate reduction in the absence of oxygen. The paradigm shift that this entailed is ecologically significant because the eukaryotes in question comprise global players like diatoms, foraminifers, and fungi. This review article provides an unprecedented overview of nitrate....... A first compilation of intracellular nitrate inventories in various marine sediments is presented, indicating that intracellular nitrate pools vastly exceed porewater nitrate pools. The relative contribution by foraminifers to total sedimentary denitrification is estimated for different marine settings...

  9. Dissimilatory Metal Reduction by Anaeromyxobacter Species

    Energy Technology Data Exchange (ETDEWEB)

    Qingzhong Wu; Cornell Gayle; Frank Löffler; Sanford, Robert

    2004-03-17

    Recent findings suggest that Anaeromyxobacter populations play relevant roles in metal and radionuclide reduction and immobilization at contaminated DOE sites. This research effort will characterize Anaeromyxobacter dehalogenans strain 2CP-C as well as other Anaeromyxobacter isolates in hand, and assess their contribution towards metal detoxification and plume stabilization under environmentally relevant conditions.

  10. Pressure effect on dissimilatory sulfate reduction

    Science.gov (United States)

    Williamson, A. J.; Carlson, H. K.; Coates, J. D.

    2015-12-01

    Biosouring is the production of H2S by sulfate reducing microorganisms (SRM) in-situ or in the produced fluids of oil reservoirs. Sulfide is explosive, toxic and corrosive which can trigger equipment and transportation failure, leading to environmental catastrophe. As oil exploration and reservoir development continue, subsequent enhanced recovery is occurring in progressively deeper formations and typical oil reservoir pressures range from 10-50 MPa. Therefore, an understanding of souring control effects will require an accurate understanding of the influence of pressure on SRM metabolism and the efficacy of souring control treatments at high pressure. Considerable work to date has focussed on souring control at ambient pressure; however, the influence of pressure on biogeochemical processes and souring treatments in oil reservoirs is poorly understood. To explore the impact of pressure on SRM, wild type Desulfovibrio alaskensis G20 (isolated from a producing oil well in Ventura County, California) was grown under a range of pressures (0.1-14 MPa) at 30 °C. Complete sulfate reduction occurred in all pressures tested within 3 days, but microbial growth was inhibited with increasing pressure. Bar-seq identified several genes associated with flagella biosynthesis (including FlhB) and assembly as important for survival at elevated pressure and fitness was confirmed using individual transposon mutants. Flagellar genes have previously been implicated with biofilm formation and confocal microscopy on glass slides incubated with wild type D. alaskensis G20 showed more biomass associated with surfaces under pressure, highlighting the link between pressure, flagellar and biofilm formation. To determine the effect of pressure on the efficacy of SRM inhibitors, IC50 experiments were conducted and D. alaskensis G20 showed a greater resistance to nitrate and the antibiotic chloramphenicol, but a lower resistance to perchlorate. These results will be discussed in the context of

  11. [Influence of Dissimilatory Iron Reduction on the Speciation and Bioavailability of Heavy Metals in Soil].

    Science.gov (United States)

    Si, You-bin; Wang, Juan

    2015-09-01

    Fe(III) dissimilatory reduction by microbes is an important process of producing energy in the oxidation of organic compounds under anaerobic condition with Fe(III) as the terminal electron acceptor and Fe(II) as the reduction product. This process is of great significance in element biogeochemical cycle. Iron respiration has been described as one of the most ancient forms of microbial metabolism on the earth, which is bound up with material cycle in water, soil and sediments. Dissimilatory iron reduction plays important roles in heavy metal form transformation and the remediation of heavy metal and radionuclide contaminated soils. In this paper, we summarized the research progress of iron reduction in the natural environment, and discussed the influence and the mechanism of dissimilatory iron reduction on the speciation and bioavailability of heavy metals in soil. The effects of dissimilatory iron reduction on the speciation of heavy metals may be attributed to oxidation and reduction, methytation and immobilization of heavy metals in relation to their bioavailability in soils. The mechanisms of Fe(III) dissimilatory reduction on heavy metal form transformation contain biological and chemical interactions, but the mode of interaction remains to be further investigated.

  12. Dissimilatory Fe(III) and Mn(IV) reduction.

    Science.gov (United States)

    Lovley, Derek R; Holmes, Dawn E; Nevin, Kelly P

    2004-01-01

    Dissimilatory Fe(III) and Mn(IV) reduction has an important influence on the geochemistry of modern environments, and Fe(III)-reducing microorganisms, most notably those in the Geobacteraceae family, can play an important role in the bioremediation of subsurface environments contaminated with organic or metal contaminants. Microorganisms with the capacity to conserve energy from Fe(III) and Mn(IV) reduction are phylogenetically dispersed throughout the Bacteria and Archaea. The ability to oxidize hydrogen with the reduction of Fe(III) is a highly conserved characteristic of hyperthermophilic microorganisms and one Fe(III)-reducing Archaea grows at the highest temperature yet recorded for any organism. Fe(III)- and Mn(IV)-reducing microorganisms have the ability to oxidize a wide variety of organic compounds, often completely to carbon dioxide. Typical alternative electron acceptors for Fe(III) reducers include oxygen, nitrate, U(VI) and electrodes. Unlike other commonly considered electron acceptors, Fe(III) and Mn(IV) oxides, the most prevalent form of Fe(III) and Mn(IV) in most environments, are insoluble. Thus, Fe(III)- and Mn(IV)-reducing microorganisms face the dilemma of how to transfer electrons derived from central metabolism onto an insoluble, extracellular electron acceptor. Although microbiological and geochemical evidence suggests that Fe(III) reduction may have been the first form of microbial respiration, the capacity for Fe(III) reduction appears to have evolved several times as phylogenetically distinct Fe(III) reducers have different mechanisms for Fe(III) reduction. Geobacter species, which are representative of the family of Fe(III) reducers that predominate in a wide diversity of sedimentary environments, require direct contact with Fe(III) oxides in order to reduce them. In contrast, Shewanella and Geothrix species produce chelators that solubilize Fe(III) and release electron-shuttling compounds that transfer electrons from the cell surface to

  13. Dissimilatory nitrate reduction by Aspergillus terreus isolated from the seasonal oxygen minimum zone in the Arabian Sea

    DEFF Research Database (Denmark)

    Stief, Peter; Fuchs-Ocklenburg, Silvia; Kamp, Anja

    2014-01-01

    of oxygen and nitrate revealed that this fungal isolate is capable of dissimilatory nitrate reduction to ammonium under anoxic conditions. A 15N-labeling experiment proved that An-4 produced and excreted ammonium through nitrate reduction at a rate of up to 175 nmol 15NH4 + g-1 protein h-1. The products...... of dissimilatory nitrate reduction were ammonium (83%), nitrous oxide (15.5%), and nitrite (1.5%), while dinitrogen production was not observed. The process led to substantial cellular ATP production and biomass growth and also occurred when ammonium was added to suppress nitrate assimilation, stressing...... the dissimilatory nature of nitrate reduction. Interestingly, An-4 used intracellular nitrate stores (up to 6-8 μmol NO3 - g-1 protein) for dissimilatory nitrate reduction. Conclusions: Our findings expand the short list of microbial eukaryotes that store nitrate intracellularly and carry out dissimilatory nitrate...

  14. Vertical activity distribution of dissimilatory nitrate reduction in coastal marine sediments

    DEFF Research Database (Denmark)

    Behrendt, A.; de Beer, D.; Stief, P.

    2013-01-01

    The relative importance of two dissimilatory nitrate reduction pathways, denitrification (DEN) and dissimilatory nitrate reduction to ammonium (DNRA), was investigated in intact sediment cores from five different coastal marine field sites (Dorum, Aarhus Bight, Mississippi Delta, Limfjord...... reduction was clearly dominated by DEN (59-131% of the total NO3- reduced) rather than by DNRA, irrespective of the sedimentary inventories of electron donors such as organic carbon, sulfide, and iron. Highest ammonium production via DNRA, accounting for up to 8.9% of the total NO3- reduced, was found...... at a site with very high concentrations of total sulfide and NH4+ within and below the layer in which NO3- reduction occurred. Sediment from two field sites, one with low and one with high DNRA activity in the core incubations, was also used for slurry incubations. Now, in both sediments high DNRA activity...

  15. Dissimilatory nitrate reduction by Pseudomonas alcaliphila with an electrode as the sole electron donor.

    Science.gov (United States)

    Su, Wentao; Zhang, Lixia; Li, Daping; Zhan, Guoqiang; Qian, Junwei; Tao, Yong

    2012-11-01

    Denitrification and dissimilatory nitrate reduction to ammonium (DNRA) were considered two alternative pathways of dissimilatory nitrate reduction. In this study, we firstly reported that both denitrification and DNRA occurred in Pseudomonas alcaliphila strain MBR with an electrode as the sole electron donor in a double chamber bio-electrochemical system (BES). The initial concentration of nitrate appeared as a factor determining the type of nitrate reduction with electrode as the sole electron donor at the same potential (-500 mV). As the initial concentration of nitrate increased, the fraction of nitrate reduced through denitrification also increased. While nitrite (1.38 ± 0.04 mM) was used as electron acceptor instead of nitrate, the electrons recovery via DNRA and denitrification were 43.06 ± 1.02% and 50.51 ± 1.37%, respectively. The electrochemical activities and surface topography of the working electrode catalyzed by strain MBR were evaluated by cyclic voltammetry and scanning electron microscopy. The results suggested that cells of strain MBR were adhered to the electrode, playing the role of electron transfer media for nitrate and nitrite reduction. Thus, for the first time, the results that DNRA and denitrification occurred simultaneously were confirmed by powering the strain with electricity. The study further expanded the range of metabolic reactions and had potential value for the recognization of dissimilatory nitrate reduction in various ecosystems.

  16. Dissimilatory nitrate reductions in N2O producing Bacillus azotoformans LMG 9581T

    OpenAIRE

    Sun, Yi-Hua; de Vos, Paul; Heylen, Kim; Willems, Anne

    2016-01-01

    Denitrificaion, dissimilatory nitrate reduction to ammonium (DNRA) are two N2O producing microbial processes that were previously thought to be mutually exclusive. Recently it’s proved that bacteria can contain both gene inventories, e.g. Shewanella loihica and Bacillus azotoformans. Detailed studies of these microorganisms could shed light on the differentiating environmental drivers of both processes without interference of organism-specific variation. In our study, Bacillus azotoformans sh...

  17. Geochemical and microbiological controls on dissimilatory iron reduction

    Science.gov (United States)

    Roden, Eric E.

    2006-06-01

    Recent experimental studies permit development of conceptual and quantitative models of microbial Fe(III) oxide reduction at circumneutral pH that can be compared to and contrasted with established models of abiotic mineral dissolution. The findings collectively support a model for controls on enzymatic reduction that differs fundamentally from those applied to abiotic reductive dissolution as a result of two basic phenomena: (1) the relatively minor influence of oxide mineralogical and thermodynamic properties on rates of enzymatic reduction compared to abiotic reductive dissolution, and (2) the major limitation which sorption and/or surface precipitation of biogenic Fe(II) on residual oxide and Fe(III)-reducing bacterial cell surfaces poses to enzymatic electron transfer in the presence of excess electron donor. Parallel studies with two well-characterized Fe(III)-reducing organisms ( Shewanella putrefaciens and Geobacter sulfurreducens) lead to common conclusions regarding the importance of these phenomena in regulating the rate and long-term extent of Fe(III) oxide reduction. Models in which rates of enzymatic reduction are limited by Fe(III)-reducing bacterial cell density together with the abundance of 'available' oxide surface sites (as controlled by oxide surface area and the accumulation of surface-bound biogenic Fe(II)) provide an adequate macroscopic description of controls on the initial rate and long-term extent of oxide reduction. To cite this article: E.E. Roden, C. R. Geoscience 338 (2006).

  18. Characterising microbial reduction of arsenate sorbed to ferrihydrite and its concurrence with iron reduction and the consequent impact on arsenic mobilisation

    Science.gov (United States)

    Huang, Jen-How

    2014-05-01

    Mobilisation of solid phase arsenic under reducing conditions involves a combination of microbial arsenate and iron reduction and is affected by secondary reactions of released products. A series of model anoxic incubations were performed to understand the concurrence between arsenate and ferrihydrite reduction by Shewanella putrefaciens strain CN-32 at different concentrations of arsenate, ferrihydrite and lactate, and with given ΔGrxn for arsenate and ferrihydrite reduction in non-growth conditions at pH 7. The reduction kinetics of arsenate sorbed to ferrihydrite is predominately controlled by the availability of dissolved arsenate, which is measured by the integral of dissolved arsenate concentrations against incubation time and shown to correlate with the first order rate constants. Thus, the mobilisation of adsorbed As(V) can be regarded as the rate determining step of microbial reduction of As(V) sorbed to ferrihydrite. High lactate concentrations slightly slowed down the rate of arsenate reduction due to the competition with arsenate for microbial contact. Under all experimental conditions, simultaneous arsenate and ferrihydrite reduction occurred following addition of S. putrefaciens inoculums and suggested no apparent competition between these two enzymatic reductions. Ferrous ions released from iron reduction might retard microbial arsenate reduction at high arsenate and ferrihydrite concentrations due to formation of ferrous arsenate. At high arsenate to ferrihydrite ratios, reductive dissolution of ferrihydrite shifted arsenate from sorption to dissolution and hence accelerated arsenate reduction. Reductive dissolution of ferrihydrite may cause additional releases of adsorbed As(V) into solution, which is especially effective at high As(V) to ferrihydrite ratios. In comparison, formation of Fe(II) secondary minerals during microbial Fe(III) reduction were responsible for trapping solution As(V) in the systems with high ferrihydrite but low As

  19. Effect of dissimilatory iron and sulfate reduction on arsenic dynamics in the wetland rhizosphere and its bioaccumulation in plants

    Science.gov (United States)

    Jaffe, P. R.; Zhang, Z.; Moon, H. S.; Myneni, S.

    2015-12-01

    The mobility of arsenic in soils is linked to biogeochemical redox processes. The presence of wetland plants in riparian wetlands has a significant impact on the biogeochemical dynamics of the soil/sediment-redoxcline due to the release of root exudates and root turnover and oxygen transfer from the roots into the surrounding sediment. Micro-environmental redox conditions in the rhizosphere affect As, Fe, and S speciation as well as Fe(III) plaque deposition, which affects arsenic transport and uptake by plants. To investigate the dynamics of As coupled to S and Fe cycling in wetlands, mesocosms were operated in a greenhouse under various conditions (high and low Fe, high and low sulfate, with plant and without plants) for four months. Results show that the presence of plants, high Fe, and high SO42- levels enhanced As sequestration in these soils. We hypothesize that this compounding effect is because plants release biodegradable organic carbon, which is used by microorganism to reduce ferrihydrite and SO42- to generate FeS, FeS2, and/or orpiment (As2S3). Over the concentration range studied, As immobilization in soil and uptake by Scirpus actus was mainly controlled by SO42- rather than Fe levels. Under high sulfate levels, As immobilization in soil increased by 50% and As concentrations in plant roots increased by 97%, whereas no significant changes in plant As levels were seen for varying Fe concentrations. More than 80% of As was sequestrated in soils rather than plant uptake. Pore water As speciation analyses indicate that 20% more As(V) was reduced to As(III) under high sulfate as than low sulfate levels and that low Fe was more favorable to the As dissimilatory reduction. More dissimilatory arsenate-respiring bacteria (DARB) under high sulfate were confirmed by quantitative PCR. Arsenic distribution in plant leafs and roots after 30 days of exposure to As was analyzed via Synchrotron X-ray fluorescence analyses. The uptake of As by plants was distributed

  20. Dissimilatory Reduction of Elemental Selenium to Selenide in Sediments and Anaerobic Cultures of Selenium Respiring Bacteria

    Science.gov (United States)

    Herbel, M. J.; Switzer-Blum, J.; Oremland, R. S.

    2001-12-01

    Selenium contaminated environments often contain elemental Se (Se0) in their sediments that originates from dissimilatory reduction of Se oxyanions. The forms of Se in sedimentary rocks similarly contain high proportions of Se0, but much of the Se is also in the form of metal selenides, Se-2. It is not clear if the occurrence of these selenides is due to microbial reduction of Se0, or some other biological or chemical process. In this investigation we examined the possibility that bacterial respiratory reduction of Se0 to Se-2 could explain the presence of the latter species in sedimentary rocks. We conducted incubations of anoxic sediment slurries amended with different forms of Se0. High levels of Se0 (mM) were added to San Francisco Bay sediments in order to enhance the detection of soluble HSe-, which was precipitated with Cu2+ then redissolved and quantified by ICP-MS. Concentrations of HSe- were highest in live samples amended with red amorphous Se0 formed by either microbial reduction of Se+4 ("biogenic Se0") or by chemical oxidation of H2Se(g) ("chem. Se0"); very little HSe- was formed in those amended with black crystalline Se0, indicating the general lack of reactivity of this allotrope. Controls poisoned with 10% formalin did not produce HSe- from additions of chem. Se0. Reduction of both forms of red amorphous Se0 to HSe- occurred vigorously in growing cultures of Bacillus selenitireducens, an anaerobic halophile previously isolated from sediments of Mono Lake, CA. Up to 73% and 68% of red amorphous, biogenic Se0 or chem. Se0, respectively, was reduced to HSe- during growth of B. selenitireducens, (incubation time ~ 200 hrs): oxidation of lactate to acetate as well as cell density increases indicated that a dissimilatory reduction pathway was likely. Reduction was most enhanced when cells were previously grown on elemental sulfur or Se+4. In contrast to the growth experiments, washed cell suspensions of B. selenitireducens exhibited no HSe- production

  1. The octaheme SirA catalyses dissimilatory sulfite reduction in Shewanella oneidensis MR-1

    Energy Technology Data Exchange (ETDEWEB)

    Shirodkar, Sheetal; Reed, Samantha B.; Romine, Margaret F.; Saffarini, Daad

    2011-01-01

    Shewanella oneidensis MR-1 is a metal reducer that uses a large number of electron acceptors that include thiosulfate, polysulfide, and sulfite. The enzyme required for thiosulfate and polysulfide respiration has been recently identified, but the mechanisms of sulfite reduction remained unexplored. Analysis of MR-1 cultures grown anaerobically with sulfite suggested that the dissimilatory sulfite reductase catalyzes six-electron reduction of sulfite to sulfide. Reduction of sulfite required menaquinones and c cytochromes but appeared to be independent of the intermediate electron carrier CymA. Furthermore, the terminal sulfite reductase, SirA, was identified as an octaheme c cytochrome with an atypical heme binding site that represents a new class of sulfite reductases. The sirA locus was identified in the genomes of several sequenced Shewanella genomes, and its presence appears to be linked to the ability of these organisms to reduce sulfite under anaerobic conditions.

  2. Effect of high electron donor supply on dissimilatory nitrate reduction pathways in a bioreactor for nitrate removal

    DEFF Research Database (Denmark)

    Behrendt, Anna; Tarre, Sheldon; Beliavski, Michael;

    2014-01-01

    The possible shift of a bioreactor for NO3- removal from predominantly denitrification (DEN) to dissimilatory nitrate reduction to ammonium (DNRA) by elevated electron donor supply was investigated. By increasing the C/NO3- ratio in one of two initially identical reactors, the production of high...... sulfide concentrations was induced. The response of the dissimilatory NO3- reduction processes to the increased availability of organic carbon and sulfide was monitored in a batch incubation system. The expected shift from a DEN- towards a DNRA-dominated bioreactor was not observed, also not under...

  3. Effect of high electron donor supply on dissimilatory nitrate reduction pathways in a bioreactor for nitrate removal

    DEFF Research Database (Denmark)

    Behrendt, Anna; Tarre, Sheldon; Beliavski, Michael

    2014-01-01

    The possible shift of a bioreactor for NO3- removal from predominantly denitrification (DEN) to dissimilatory nitrate reduction to ammonium (DNRA) by elevated electron donor supply was investigated. By increasing the C/NO3- ratio in one of two initially identical reactors, the production of high...... sulfide concentrations was induced. The response of the dissimilatory NO3- reduction processes to the increased availability of organic carbon and sulfide was monitored in a batch incubation system. The expected shift from a DEN- towards a DNRA-dominated bioreactor was not observed, also not under...

  4. Dissimilatory nitrate reduction processes in sediments of urban river networks: Spatiotemporal variations and environmental implications.

    Science.gov (United States)

    Cheng, Lv; Li, Xiaofei; Lin, Xianbiao; Hou, Lijun; Liu, Min; Li, Ye; Liu, Sai; Hu, Xiaoting

    2016-12-01

    Urbanizations have increased the loadings of reactive nitrogen in urban riverine environments. However, limited information about dissimilatory nitrate reduction processes and associated contributions to nitrogen removal is available for urban riverine environments. In this study, sediment slurry experiments were conducted with nitrogen isotope-tracing technique to investigate the potential rates of denitrification, anaerobic ammonium oxidation (anammox) and dissimilatory nitrate reduction to ammonium (DNRA) and their contributions to nitrate reduction in sediments of urban river networks, Shanghai. The potential rates of denitrification, anammox and DNRA measured in the study area ranged from 0.193 to 98.7 nmol N g(-1) h(-1) dry weight (dw), 0.0387-23.7 nmol N g(-1) h(-1) dw and 0-10.3 nmol N g(-1) h(-1) dw, respectively. Denitrification and DNRA rates were higher in summer than in winter, while anammox rates were greater in winter than in summer for most sites. Dissolved oxygen, total organic carbon, nitrate, ammonium, sulfide, Fe(II) and Fe(III) were found to have significant influence on these nitrate reduction processes. Denitrification contributed 11.5-99.5%% to total nitrate reduction, as compared to 0.343-81.6% for anammox and 0-52.3% for DNRA. It is estimated that nitrogen loss of approximately 1.33 × 10(5) t N year(-1) was linked to both denitrification and anammox processes, which accounted for about 20.1% of total inorganic nitrogen transported annually into the urban river networks of Shanghai. Overall, these results show the potential importance of denitrification and anammox in nitrogen removal and provide new insight into the mechanisms of nitrogen cycles in urban riverine environments.

  5. Redox states of Desulfovibrio vulgaris DsrC, a key protein in dissimilatory sulfite reduction

    Energy Technology Data Exchange (ETDEWEB)

    Venceslau, Sofia S. [Instituto de Tecnologia Química e Biológica António Xavier, Universidade Nova de Lisboa, Oeiras (Portugal); Cort, John R.; Baker, Erin S. [Fundamental and Computational Sciences Directorate, Pacific Northwest National Laboratory, Richland, WA 99352 (United States); Chu, Rosalie K.; Robinson, Errol W. [Environmental Molecular Sciences Laboratory, Pacific Northwest National Laboratory, Richland, WA 99352 (United States); Dahl, Christiane [Institut für Mikrobiologie and Biotechnologie, Rheinische Friedrich-Wilhelms-Universität Bonn, Meckenheimer Allee 168, D-53115 Bonn (Germany); Saraiva, Lígia M. [Instituto de Tecnologia Química e Biológica António Xavier, Universidade Nova de Lisboa, Oeiras (Portugal); Pereira, Inês A.C., E-mail: ipereira@itqb.unl.pt [Instituto de Tecnologia Química e Biológica António Xavier, Universidade Nova de Lisboa, Oeiras (Portugal)

    2013-11-29

    Highlights: •DsrC is known to interact with the dissimilatory sulfite reductase enzyme (DsrAB). •We show that, however, most cellular DsrC is not associated with DsrAB. •A gel-shift assay was developed that allows monitoring of the DsrC redox state. •The DsrC intramolecularly oxidized state could only be produced by arginine treatment. -- Abstract: Dissimilatory reduction of sulfite is carried out by the siroheme enzyme DsrAB, with the involvement of the protein DsrC, which has two conserved redox-active cysteines. DsrC was initially believed to be a third subunit of DsrAB. Here, we report a study of the distribution of DsrC in cell extracts to show that, in the model sulfate reducer Desulfovibrio vulgaris, the majority of DsrC is not associated with DsrAB and is thus free to interact with other proteins. In addition, we developed a cysteine-labelling gel-shift assay to monitor the DsrC redox state and behaviour, and procedures to produce the different redox forms. The oxidized state of DsrC with an intramolecular disulfide bond, which is proposed to be a key metabolic intermediate, could be successfully produced for the first time by treatment with arginine.

  6. Dissimilatory perchlorate reduction linked to aerobic methane oxidation via chlorite dismutase

    Science.gov (United States)

    Oremland, R. S.; Baesman, S. M.; Miller, L. G.

    2013-12-01

    The presence of methane (CH4) in the atmosphere of Mars is controversial yet the evidence has aroused scientific interest, as CH4 could be a harbinger of extant or extinct microbial life. There are various oxidized compounds present on the surface of Mars that could serve as electron acceptors for the anaerobic oxidation of CH4, including perchlorate (ClO4-). We examined the role of perchlorate, chlorate (ClO3-) and chlorite (ClO2-) as oxidants linked to CH4 oxidation. Dissimilatory perchlorate reduction begins with reduction of ClO4- to ClO2- and ends with dismutation of chlorite to yield chloride (Cl-) and molecular oxygen (O2). We explored the potential for aerobic CH4 oxidizing bacteria to couple with oxygen derived from chlorite dismutation during dissimilatory perchlorate reduction. Methane (0.2 kPa) was completely removed within several days from the N2-flushed headspace above cell suspensions of methanotrophs (Methylobacter albus strain BG8) and perchlorate reducing bacteria (Dechloromonas agitata strain CKB) in the presence of 5 mM ClO2-. Similar rates of CH4 consumption were observed for these mixed cultures whether they were co-mingled or segregated under a common headspace, indicating that direct contact of cells was not required for methane consumption to occur. We also observed complete removal of 0.2 kPa CH4 in bottles containing dried soil (enriched in methanotrophs by CH4 additions over several weeks) and D. agitata CKB and in the presence of 10 mM ClO2-. This soil (seasonally exposed sediment) collected from the shoreline of a freshwater lake (Searsville Lake, CA) demonstrated endogenous CH4 uptake as well as perchlorate, chlorate and chlorite reduction/dismutation. However, these experiments required physical separation of soil from the aqueous bacterial culture to allow for the partitioning of O2 liberated from chlorite dismutation into the shared headspace. Although dissimilatory reduction of ClO4- and ClO3- could be inferred from the

  7. Dissimilatory nitrate reduction by Aspergillus terreus isolated from the seasonal oxygen minimum zone in the Arabian Sea

    DEFF Research Database (Denmark)

    Stief, Peter; Fuchs-Ocklenburg, Silvia; Kamp, Anja

    2014-01-01

    Background: A wealth of microbial eukaryotes is adapted to life in oxygen-deficient marine environments. Evidence is accumulating that some of these eukaryotes survive anoxia by employing dissimilatory nitrate reduction, a strategy that otherwise is widespread in prokaryotes. Here, we report on t...

  8. Dissimilatory nitrate reduction by Aspergillus terreus isolated from the seasonal oxygen minimum zone in the Arabian Sea

    NARCIS (Netherlands)

    Stief, Peter; Fuchs-Ocklenburg, Silvia; Kamp, Anja; Manohar, Cathrine-Sumathi; Houbraken, Jos; Boekhout, Teun; de Beer, Dirk; Stoeck, Thorsten

    2014-01-01

    BACKGROUND: A wealth of microbial eukaryotes is adapted to life in oxygen-deficient marine environments. Evidence is accumulating that some of these eukaryotes survive anoxia by employing dissimilatory nitrate reduction, a strategy that otherwise is widespread in prokaryotes. Here, we report on the

  9. Dissimilatory nitrate reduction by Aspergillus terreus isolated from the seasonal oxygen minimum zone in the Arabian Sea

    NARCIS (Netherlands)

    Stief, Peter; Fuchs-Ocklenburg, Silvia; Kamp, Anja; Manohar, Cathrine-Sumathi; Houbraken, Jos; Boekhout, Teun; de Beer, Dirk; Stoeck, Thorsten

    2014-01-01

    BACKGROUND: A wealth of microbial eukaryotes is adapted to life in oxygen-deficient marine environments. Evidence is accumulating that some of these eukaryotes survive anoxia by employing dissimilatory nitrate reduction, a strategy that otherwise is widespread in prokaryotes. Here, we report on the

  10. Dissimilatory nitrate reduction to ammonium conserves nitrogen in anthropogenically affected subtropical mangrove sediments in Southeast China.

    Science.gov (United States)

    Cao, Wenzhi; Yang, Jingxin; Li, Ying; Liu, Baoli; Wang, Feifei; Chang, Changtang

    2016-09-15

    In this study, basic sediment properties, nutrient flux, and nitrogen cycle (including denitrification, anaerobic ammonium oxidation [anammox], nitrification, and dissimilatory nitrate reduction to ammonium [DNRA]) were investigated at two sampling sites with different tree ages in the mangrove region of the Jiulong River Estuary, China. The results show that sediments at mangrove flat area have relatively strong capability to reduce NO3(-), in which the DNRA rate is relatively high (204.53±48.32μmolNm(-2)h(-1)), which is approximately 75.7-85.9% of the total NO3(-) reduction, while the denitrification and anammox rates are relatively low - only approximately 5.6-9.5% and 8.5-14.8% of the total NO3(-) reduction, respectively. Thus, in the nitrogen-enriched subtropical mangrove system, DNRA is the main pathway to reduce NO3(-), and most of the input nitrogen is conserved as NH4(+) in the system, which assures high productivity of the mangrove system.

  11. The octahaem SirA catalyses dissimilatory sulfite reduction in Shewanella oneidensis MR-1.

    Science.gov (United States)

    Shirodkar, Sheetal; Reed, Samantha; Romine, Margie; Saffarini, Daad

    2011-01-01

    Shewanella oneidensis MR-1 is a metal reducer that uses a large number of electron acceptors including thiosulfate, polysulfide and sulfite. The enzyme required for thiosulfate and polysulfide respiration has been recently identified, but the mechanisms of sulfite reduction remained unexplored. Analysis of MR-1 cultures grown anaerobically with sulfite suggested that the dissimilatory sulfite reductase catalyses six-electron reduction of sulfite to sulfide. Reduction of sulfite required menaquinones but was independent of the intermediate electron carrier CymA. Furthermore, the terminal sulfite reductase, SirA, was identified as an octahaem c cytochrome with an atypical haem binding site. The sulfite reductase of S. oneidensis MR-1 does not appear to be a sirohaem enzyme, but represents a new class of sulfite reductases. The gene that encodes SirA is located within a 10-gene locus that is predicted to encode a component of a specialized haem lyase, a menaquinone oxidase and copper transport proteins. This locus was identified in the genomes of several Shewanella species and appears to be linked to the ability of these organisms to reduce sulfite under anaerobic conditions.

  12. Quantification and isotopic analysis of intracellular sulfur metabolites in the dissimilatory sulfate reduction pathway

    Science.gov (United States)

    Sim, Min Sub; Paris, Guillaume; Adkins, Jess F.; Orphan, Victoria J.; Sessions, Alex L.

    2017-06-01

    Microbial sulfate reduction exhibits a normal isotope effect, leaving unreacted sulfate enriched in 34S and producing sulfide that is depleted in 34S. However, the magnitude of sulfur isotope fractionation is quite variable. The resulting changes in sulfur isotope abundance have been used to trace microbial sulfate reduction in modern and ancient ecosystems, but the intracellular mechanism(s) underlying the wide range of fractionations remains unclear. Here we report the concentrations and isotopic ratios of sulfur metabolites in the dissimilatory sulfate reduction pathway of Desulfovibrio alaskensis. Intracellular sulfate and APS levels change depending on the growth phase, peaking at the end of exponential phase, while sulfite accumulates in the cell during stationary phase. During exponential growth, intracellular sulfate and APS are strongly enriched in 34S. The fractionation between internal and external sulfate is up to 49‰, while at the same time that between external sulfate and sulfide is just a few permil. We interpret this pattern to indicate that enzymatic fractionations remain large but the net fractionation between sulfate and sulfide is muted by the closed-system limitation of intracellular sulfate. This 'reservoir effect' diminishes upon cessation of exponential phase growth, allowing the expression of larger net sulfur isotope fractionations. Thus, the relative rates of sulfate exchange across the membrane versus intracellular sulfate reduction should govern the overall (net) fractionation that is expressed. A strong reservoir effect due to vigorous sulfate reduction might be responsible for the well-established inverse correlation between sulfur isotope fractionation and the cell-specific rate of sulfate reduction, while at the same time intraspecies differences in sulfate uptake and/or exchange rates could account for the significant scatter in this relationship. Our approach, together with ongoing investigations of the kinetic isotope

  13. Iron isotope fractionation during microbial dissimilatory iron oxide reduction in simulated Archaean seawater.

    Science.gov (United States)

    Percak-Dennett, E M; Beard, B L; Xu, H; Konishi, H; Johnson, C M; Roden, E E

    2011-05-01

    The largest Fe isotope excursion yet measured in marine sedimentary rocks occurs in shales, carbonates, and banded iron formations of Neoarchaean and Paleoproterozoic age. The results of field and laboratory studies suggest a potential role for microbial dissimilatory iron reduction (DIR) in producing this excursion. However, most experimental studies of Fe isotope fractionation during DIR have been conducted in simple geochemical systems, using pure Fe(III) oxide substrates that are not direct analogues to phases likely to have been present in Precambrian marine environments. In this study, Fe isotope fractionation was investigated during microbial reduction of an amorphous Fe(III) oxide-silica coprecipitate in anoxic, high-silica, low-sulphate artificial Archaean seawater at 30 °C to determine if such conditions alter the extent of reduction or isotopic fractionations relative to those observed in simple systems. The Fe(III)-Si coprecipitate was highly reducible (c. 80% reduction) in the presence of excess acetate. The coprecipitate did not undergo phase conversion (e.g. to green rust, magnetite or siderite) during reduction. Iron isotope fractionations suggest that rapid and near-complete isotope exchange took place among all Fe(II) and Fe(III) components, in contrast to previous work on goethite and hematite, where exchange was limited to the outer few atom layers of the substrate. Large quantities of low-δ(56)Fe Fe(II) (aqueous and solid phase) were produced during reduction of the Fe(III)-Si coprecipitate. These findings shed new light on DIR as a mechanism for producing Fe isotope variations observed in Neoarchaean and Paleoproterozoic marine sedimentary rocks.

  14. Sulfur Isotopic Fractionation During Dissimilatory Sulfate Reduction from the Perspective of an Entire Microbial Metabolism

    Science.gov (United States)

    Webber, B.; Lau, L.; Wing, B.

    2009-05-01

    Whether in the investigation of the most ancient life on Earth, examination of surface oxidation properties across geological timescales, or the estimation of microbial metabolism in inaccessible environments, dissimilatory sulfate reduction (DSR) constrains biogeochemical processes in a variety of spatial and temporal scales. Pioneering work in the 1970s established the importance of DSR to biogeochemical processes and its potential as a geochemical tracer, and models for biological controls of DSR were published from empirical results of in vitro microbial cultures. Recent efforts have expanded upon this body of work and further extended toward multiple sulfur isotopes and through the more precise definition of the biological processes themselves. Resulting from these recent efforts is an rigorous description of DSR of the sulfur metabolism of sulfate-reducing bacteria. However, despite these efforts, the exact mechanisms of DSR within the scope of a complex system such as microbial metabolism remain incomplete and obscure. We will be presenting ongoing work coupling together recent mathematical models of isotopic fractionation with a flux-oriented, genomically-derived software model of the metabolism of Desulfovibrio vulgaris, a patent sulfate-reducing bacterium. Our presentation will explore the effects on isotopic fractionation throughout the sulfate reduction pathway of D. vulgaris by a multitude of separate and distinct biological pathways within the bacterial metabolism. Further, we will be discussing both the pitfalls and promise of such an approach and its implications for future research.

  15. Dissimilatory Fe(III) reduction by the marine microorganism Desulfuromonas acetoxidans

    Science.gov (United States)

    Roden, E.E.; Lovley, D.R.

    1993-01-01

    The ability of the marine microorganism Desulfuromonas acetoxidans to reduce Fe(III) was investigated because of its close phylogenetic relationship with the freshwater dissimilatory Fe(III) reducer Geobacter metallireducens. Washed cell suspensions of the type strain of D. acetoxidans reduced soluble Fe(III)-citrate and Fe(III) complexed with nitriloacetic acid. The c-type cytochrome(s) of D. acetoxidans was oxidized by Fe(III)- citrate and Mn(IV)-oxalate, as well as by two electron acceptors known to support growth, colloidal sulfur and malate. D. acetoxidans grew in defined anoxic, bicarbonate-buffered medium with acetate as the sole electron donor and poorly crystalline Fe(III) or Mn(IV) as the sole electron acceptor. Magnetite (Fe3O4) and siderite (FeCO3) were the major end products of Fe(III) reduction, whereas rhodochrosite (MnCO3) was the end product of Mn(IV) reduction. Ethanol, propanol, pyruvate, and butanol also served as electron donors for Fe(III) reduction. In contrast to D. acetoxidans, G. metallireducens could only grow in freshwater medium and it did not conserve energy to support growth from colloidal S0 reduction. D. acetoxidans is the first marine microorganism shown to conserve energy to support growth by coupling the complete oxidation of organic compounds to the reduction of Fe(III) or Mn(IV). Thus, D. acetoxidans provides a model enzymatic mechanism for Fe(III) or Mn(IV) oxidation of organic compounds in marine and estuarine sediments. These findings demonstrate that 16S rRNA phylogenetic analyses can suggest previously unrecognized metabolic capabilities of microorganisms.

  16. Effect of high electron donor supply on dissimilatory nitrate reduction pathways in a bioreactor for nitrate removal.

    Science.gov (United States)

    Behrendt, Anna; Tarre, Sheldon; Beliavski, Michael; Green, Michal; Klatt, Judith; de Beer, Dirk; Stief, Peter

    2014-11-01

    The possible shift of a bioreactor for NO3(-) removal from predominantly denitrification (DEN) to dissimilatory nitrate reduction to ammonium (DNRA) by elevated electron donor supply was investigated. By increasing the C/NO3(-) ratio in one of two initially identical reactors, the production of high sulfide concentrations was induced. The response of the dissimilatory NO3(-) reduction processes to the increased availability of organic carbon and sulfide was monitored in a batch incubation system. The expected shift from a DEN- towards a DNRA-dominated bioreactor was not observed, also not under conditions where DNRA would be thermodynamically favorable. Remarkably, the microbial community exposed to a high C/NO3(-) ratio and sulfide concentration did not use the most energy-gaining process.

  17. Nitric Oxide Production by the Human Intestinal Microbiota by Dissimilatory Nitrate Reduction to Ammonium

    Directory of Open Access Journals (Sweden)

    Joan Vermeiren

    2009-01-01

    Full Text Available The free radical nitric oxide (NO is an important signaling molecule in the gastrointestinal tract. Besides eukaryotic cells, gut microorganisms are also capable of producing NO. However, the exact mechanism of NO production by the gut microorganisms is unknown. Microbial NO production was examined under in vitro conditions simulating the gastrointestinal ecosystem using L-arginine or nitrate as substrates. L-arginine did not influence the microbial NO production. However, NO concentrations in the order of 90 ng NO-N per L feed medium were produced by the fecal microbiota from nitrate. N15 tracer experiments showed that nitrate was mainly reduced to ammonium by the dissimilatory nitrate reduction to ammonium (DNRA pathway. To our knowledge, this is the first study showing that gastrointestinal microbiota can generate substantial amounts of NO by DNRA and not by the generally accepted denitrification or L-arginine pathway. Further work is needed to elucidate the exact role between NO produced by the gastrointestinal microbiota and host cells.

  18. Arsenate reduction and expression of multiple chromosomal ars operons in Geobacillus kaustophilus A1.

    Science.gov (United States)

    Cuebas, Mariola; Villafane, Aramis; McBride, Michelle; Yee, Nathan; Bini, Elisabetta

    2011-07-01

    Geobacillus kaustophilus strain A1 was previously isolated from a geothermal environment for its ability to grow in the presence of high arsenate levels. In this study, the molecular mechanisms of arsenate resistance of the strain were investigated. As(V) was reduced to As(III), as shown by HPLC analysis. Consistent with the observation that the micro-organism is not capable of anaerobic growth, no respiratory arsenate reductases were identified. Using specific PCR primers based on the genome sequence of G. kaustophilus HTA426, three unlinked genes encoding detoxifying arsenate reductases were detected in strain A1. These genes were designated arsC1, arsC2 and arsC3. While arsC3 is a monocistronic locus, sequencing of the regions flanking arsC1 and arsC2 revealed the presence of additional genes encoding a putative arsenite transporter and an ArsR-like regulator upstream of each arsenate reductase, indicating the presence of sequences with putative roles in As(V) reduction, As(III) export and arsenic-responsive regulation. RT-PCR demonstrated that both sets of genes were co-transcribed. Furthermore, arsC1 and arsC2, monitored by quantitative real-time RT-PCR, were upregulated in response to As(V), while arsC3 was constitutively expressed at a low level. A mechanism for regulation of As(V) detoxification by Geobacillus that is both consistent with our findings and relevant to the biogeochemical cycle of arsenic and its mobility in the environment is proposed.

  19. In Situ Dissimilatory Nitrate Reduction to Ammonium in a Paddy Soil Fertilized with Liquid Cattle Waste

    Institute of Scientific and Technical Information of China (English)

    LU Wei-Wei; S.RIYA; ZHOU Sheng; M.HOSOMI; ZHANG Hai-Lin; SHI Wei-Ming

    2012-01-01

    Most studies on dissimilatory nitrate reduction to ammonium (DNRA) in paddy soils were conducted in the laboratory and in situ studies are in need for better understanding of the DNRA process.In this study,in situ incubations of soil DNRA using 15N tracer were carried out in paddy fields under conventional water (CW) and low water (LW) managements to explore the potential of soil DNRA after liquid cattle waste (LCW) application and to investigate the impacts of soil redox potential (Eh) and labile carbon on DNRA.DNRA rates ranged from 3.06 to 10.40 mg N kg -1 dry soil d-1,which accounted for 8.55%-12.36% and 3.88%-25.44% of consunption of added NO3-15N when Eh at 5 cm soil depth ranged from 230 to 414 mV and -225 to -65 mV,respectively.DNRA rates showed no significant difference in paddy soils under two water managements although soil Eh and/or dissolved organic carbon (DOC) were more favorable for DNRA in the paddy soil under CW management 1 d before,or 5 and 7 d after LCW application.Soil DNRA rates were negatively correlated with soil Eh (P < 0.05,n =5) but positively correlated with soil DOC (P < 0.05,n =5) in the paddy soil under LW management,while no significant correlations were shown in the paddy soil under CW management.The potential of DNRA measured in situ was consistent with previous laboratory studies; and the controlling factors of DNRA in paddy soils might be different under different water managements,probably due to the presence of different microfloras of DNRA.

  20. Electrical Signatures Associated with Abiotic and In Vitro Dissimilatory Iron Reduction

    Science.gov (United States)

    Regberg, A. B.; Brantley, S. L.; Singha, K.; Tien, M.

    2007-05-01

    Several researchers have described anomalous electrical signatures associated with bacterial activity in anoxic zones in aquifers containing organic contaminants. It is thought that these signals can be attributed to (bio)geochemical changes caused by the oxidation of organic contaminants and the reduction of associated species like iron oxides. We report laboratory observations of changes in electrical conductivity (EC) that can be attributed to specific (bio)geochemical reactions involving reductive dissolution of iron oxides enzymatically and nonenzymatically. Abiotic reduction of ferrihydrite by ascorbic acid in batch experiments causes a cumulative 20- 40% increase in measured conductivity, (EC increases by ~300 μ S/cm). This change can be attributed to a decrease in conductivity (Δ EC) from increasing proton activity (Δ pH = 3.25 --> 5.07, Δ EC = -200 μ S/cm) and an increase in dissolved Fe(II) (Δ [Fe] = 2.2 - 3.3 mM, Δ EC = 400 -700 μ S/cm). Conductivity is presumably unaffected by Fe(II) sorbed to the ferrihydrite. Rates calculated from this method are comparable to literature rates for similar experiments. In a similar in vitro system, total membrane fractions from Shewanella oneidensis MR-1 were used to reduce ferrihydrite in the presence of formate and HEPES buffer. A 10 - 15% increase in conductivity was observed in the batch experiment (Δ EC = ~280 μ S/cm). This Δ EC is attributed to an increase in the concentration of de-protonated HEPES as well as carbonate ion as formate is oxidized. Fe(II) released in this system is quickly sorbed onto the ferrihydrite surface and is not thought to change conductivity. Despite the sorption of iron in these in vitro experiments, conductivity changes measurably and documents the rate of the reaction. Accessory changes like buffer de- protonation play an important role in interpreting the electrical signals caused by dissimilatory iron reduction. In order to accurately interpret field data it is necessary

  1. Mutational and gene expression analysis of mtrDEF, omcA and mtrCAB during arsenate and iron reduction in Shewanella sp. ANA-3.

    Science.gov (United States)

    Reyes, Carolina; Murphy, Julie N; Saltikov, Chad W

    2010-07-01

    Arsenate respiration and Fe(III) reduction are important processes that influence the fate and transport of arsenic in the environment. The goal of this study was to investigate the impact of arsenate on Fe(III) reduction using arsenate and Fe(III) reduction deficient mutants of Shewanella sp. strain ANA-3. Ferrihydrite reduction in the absence of arsenate was similar for an arsenate reduction mutant (arrA and arsC deletion strain of ANA-3) compared with wild-type ANA-3. However, the presence of arsenate adsorbed onto ferrihydrite impeded Fe(III) reduction for the arsenate reduction mutant but not in the wild-type. In an Fe(III) reduction mutant (mtrDEF, omcA, mtrCAB null mutant of ANA-3), arsenate was reduced similarly to wild-type ANA-3 indicating the Fe(III) reduction pathway is not required for ferrihydrite-associated arsenate reduction. Expression analysis of the mtr/omc gene cluster of ANA-3 showed that omcA and mtrCAB were expressed under soluble Fe(III), ferrihydrite and arsenate growth conditions and not in aerobically grown cells. Expression of arrA was greater with ferrihydrite pre-adsorbed with arsenate relative to ferrihydrite only. Lastly, arrA and mtrA were simultaneously induced in cells shifted to anaerobic conditions and exposed to soluble Fe(III) and arsenate. These observations suggest that, unlike Fe(III), arsenate can co-induce operons (arr and mtr) implicated in arsenic mobilization.

  2. Anaerobic ammonium oxidation, denitrification and dissimilatory nitrate reduction to ammonium in the East China Sea sediment

    Directory of Open Access Journals (Sweden)

    G. D. Song

    2013-03-01

    Full Text Available Benthic nitrogen transformation pathways were investigated in the sediment of the East China Sea in June of 2010 using the 15N isotope pairing technique. Slurry incubations indicated that denitrification, anammox and dissimilatory nitrate reduction to ammonium (DNRA as well as nitrate release by nitrate storing organisms occurred in the East China Sea sediments. These four processes did not exist independently, the nitrate release therefore diluted the 15N labeling fraction of NO3−, a part of the 15NH4+ derived from DNRA also formed 30N2 via anammox. Therefore current methods of rate calculations led to over and underestimations of anammox and denitrification respectively. Following the procedure outlined in Thampdrup and Dalsgaard (2002, denitrification rates were slightly underestimated by on average 6% without regard to the effect of nitrate release, while this underestimation could be counteracted by the presence of DNRA. On the contrary, anammox rates calculated from 15NO3− experiment were significantly overestimated by 42% without considering nitrate release. In our study this overestimation could only be compensated 14% by taking DNRA into consideration. In a parallel experiment amended with 15NH4+ + 14NO3−, anammox rates were not significantly influenced by DNRA due to the high background of 15NH4+ addition. Excluding measurements in which bioirrigation was present, integrated denitrification rates decreased from 10 to 4 mmol N m−2 d−1 with water depth, while integrated anammox rates increased from 1.5 to 4.0 mmol N m−2 d−1. Consequently, the relative contribution of anammox to the total N-loss increased from 13% at the shallowest site near the Changjiang estuary to 50% at the deepest site on the outer shelf. This study represents the first time in which anammox has been demonstrated to play a significant role in benthic nitrogen cycling in the East China Sea sediment, especially on the outer shelf. N

  3. Dissimilatory Fe(III) Reduction by the Marine Microorganism Desulfuromonas acetoxidans

    OpenAIRE

    Roden, Eric E.; Lovley, Derek R.

    1993-01-01

    The ability of the marine microorganism Desulfuromonas acetoxidans to reduce Fe(III) was investigated because of its close phylogenetic relationship with the freshwater dissimilatory Fe(III) reducer Geobacter metallireducens. Washed cell suspensions of the type strain of D. acetoxidans reduced soluble Fe(III)-citrate and Fe(III) complexed with nitriloacetic acid. The c-type cytochrome(s) of D. acetoxidans was oxidized by Fe(III)-citrate and Mn(IV)-oxalate, as well as by two electron acceptors...

  4. Influence of dissimilatory metal reduction on fate of organic and metal contaminants in the subsurface

    Science.gov (United States)

    Lovley, Derek R.; Anderson, Robert T.

    Dissimilatory Fe(III)-reducing microorganisms have the ability to destroy organic contaminants under anaerobic conditions by oxidizing them to carbon dioxide. Some Fe(III)-reducing microorganisms can also reductively dechlorinate chlorinated contaminants. Fe(III)-reducing microorganisms can reduce a variety of contaminant metals and convert them from soluble forms to forms that are likely to be immobilized in the subsurface. Studies in petroleum-contaminated aquifers have demonstrated that Fe(III)-reducing microorganisms can be effective agents in removing aromatic hydrocarbons from groundwater under anaerobic conditions. Laboratory studies have demonstrated the potential for Fe(III)-reducing microorganisms to remove uranium from contaminated groundwaters. The activity of Fe(III)-reducing microorganisms can be stimulated in several ways to enhance organic contaminant oxidation and metal reduction. Molecular analyses in both field and laboratory studies have demonstrated that microorganisms of the genus Geobacter become dominant members of the microbial community when Fe(III)-reducing conditions develop as the result of organic contamination, or when Fe(III) reduction is artificially stimulated. These results suggest that further understanding of the ecophysiology of Geobacter species would aid in better prediction of the natural attenuation of organic contaminants under anaerobic conditions and in the design of strategies for the bioremediation of subsurface metal contamination. Des micro-organismes simulant la réduction du fer ont la capacité de détruire des polluants organiques dans des conditions anérobies en les oxydant en dioxyde de carbone. Certains micro-organismes réducteurs de fer peuvent aussi dé-chlorer par réduction des polluants chlorés. Des micro-organismes réducteurs de fer peuvent réduire tout un ensemble de métaux polluants et les faire passer de formes solubles à des formes qui sont susceptibles d'être immobilisées dans le milieu

  5. Surface multiheme c-type cytochromes from Thermincola potens: Implications for dissimilatory metal reduction by Gram-positive bacteria

    Science.gov (United States)

    Carlson, H. K.; Iavarone, A. T.; Gorur, A.; Yeo, B. S.; Tran, R.; Melnyk, R. A.; Mathies, R. A.; Auer, M.; Coates, J. D.

    2011-12-01

    Almost nothing is known about the mechanisms of dissimilatory metal reduction by Gram-positive bacteria, although they have been shown to be the dominant species in some environments. Thermincola potens strain JR was isolated from the anode of a microbial fuel cell inoculated with anaerobic digester sludge and operated at 55 °C. Preliminary characterization revealed that T. potens coupled acetate oxidation to the reduction of hydrous ferric oxides (HFO) or the humic substances analog, anthraquinone-2,6-disulfonate (AQDS). The genome of T. potens was recently sequenced, and the abundance of multiheme c-type cytochromes (MHCs) is unusual for a Gram-positive bacterium. We present evidence from trypsin shaving LC-MS/MS experiments and surface-enhanced Raman spectroscopy (SERS) that indicates the expression of a number of MHCs during T. potens growth on either HFO or AQDS and that several MHCs are localized to the cell wall or cell surface of T. potens. Furthermore, one of the MHCs can be extracted from cells with low pH or denaturants suggesting a loose association with the cell wall or cell surface. Electron microscopy does not reveal an S-layer, and the precipitation of silver metal on the cell surface is inhibited by cyanide, supporting the involvement of surface-localized redox-active heme proteins in dissimilatory metal reduction. These results are the first direct evidence for cell-wall associated cytochromes and MHC involvement in conducting electrons across the cell envelope of a Gram-positive bacterium.

  6. Structural and functional studies of multiheme cytochromes C involved in extracellular electron transport in bacterial dissimilatory metal reduction.

    Science.gov (United States)

    Tikhonova, T V; Popov, V O

    2014-12-01

    Bacteria utilizing insoluble mineral forms of metal oxides as electron acceptors in respiratory processes are widespread in the nature. The electron transfer from a pool of reduced quinones in the cytoplasmic membrane across the periplasm to the bacterial outer membrane and then to an extracellular acceptor is a key step in bacterial dissimilatory metal reduction. Multiheme cytochromes c play a crucial role in the extracellular electron transfer. The bacterium Shewanella oneidensis MR-1 was used as a model organism to study the mechanism of extracellular electron transport. In this review, we discuss recent data on the composition, structures, and functions of multiheme cytochromes c and their functional complexes responsible for extracellular electron transport in Shewanella oneidensis.

  7. Enhanced arsenate reduction by a CDC25-like tyrosine phosphatase explains increased phytochelatin accumulation in arsenate-tolerant Holcus lanatus.

    Science.gov (United States)

    Bleeker, Petra M; Hakvoort, Henk W J; Bliek, Mattijs; Souer, Erik; Schat, Henk

    2006-03-01

    Decreased arsenate [As(V)] uptake is the major mechanism of naturally selected As(V) hypertolerance in plants. However, As(V)-hypertolerant ecotypes also show enhanced rates of phytochelatin (PC) accumulation, suggesting that improved sequestration might additionally contribute to the hypertolerance phenotype. Here, we show that enhanced PC-based sequestration in As(V)-hypertolerant Holcus lanatus is not due to an enhanced capacity for PC synthesis as such, but to increased As(V) reductase activity. Vacuolar transport of arsenite-thiol complexes was equal in both ecotypes. Based on homology with the yeast As(V) reductase, Acr2p, we identified a Cdc25-like plant candidate, HlAsr, and confirmed the As(V) reductase activity of both HlAsr and the homologous protein from Arabidopsis thaliana. The gene appeared to be As(V)-inducible and its expression was enhanced in the As(V)-hypertolerant H. lanatus ecotype, compared with the non-tolerant ecotype. Homologous ectopic overexpression of the AtASR cDNA in A. thaliana produced a dual phenotype. It improved tolerance to mildly toxic levels of As(V) exposure, but caused hypersensitivity to more toxic levels. Arabidopsis asr T-DNA mutants showed increased As(V) sensitivity at low exposure levels and enhanced arsenic retention in the root. It is argued that, next to decreased uptake, enhanced expression of HlASR might act as an additional determinant of As(V) hypertolerance and As transport in H. lanatus.

  8. Physiological and genetic description of dissimilatory perchlorate reduction by the novel marine bacterium Arcobacter sp. strain CAB.

    Science.gov (United States)

    Carlström, Charlotte I; Wang, Ouwei; Melnyk, Ryan A; Bauer, Stefan; Lee, Joyce; Engelbrektson, Anna; Coates, John D

    2013-05-21

    A novel dissimilatory perchlorate-reducing bacterium (DPRB), Arcobacter sp. strain CAB, was isolated from a marina in Berkeley, CA. Phylogenetically, this halophile was most closely related to Arcobacter defluvii strain SW30-2 and Arcobacter ellisii. With acetate as the electron donor, strain CAB completely reduced perchlorate (ClO4(-)) or chlorate (ClO3(-)) [collectively designated (per)chlorate] to innocuous chloride (Cl(-)), likely using the perchlorate reductase (Pcr) and chlorite dismutase (Cld) enzymes. When grown with perchlorate, optimum growth was observed at 25 to 30°C, pH 7, and 3% NaCl. Transmission electron microscopy (TEM) and scanning electron microscopy (SEM) preparations were dominated by free-swimming straight rods with 1 to 2 polar flagella per cell. Strain CAB utilized a variety of organic acids, fructose, and hydrogen as electron donors coupled to (per)chlorate reduction. Further, under anoxic growth conditions strain CAB utilized the biogenic oxygen produced as a result of chlorite dismutation to oxidize catechol via the meta-cleavage pathway of aerobic catechol degradation and the catechol 2,3-dioxygenase enzyme. In addition to (per)chlorate, oxygen and nitrate were alternatively used as electron acceptors. The 3.48-Mb draft genome encoded a distinct perchlorate reduction island (PRI) containing several transposases. The genome lacks the pcrC gene, which was previously thought to be essential for (per)chlorate reduction, and appears to use an unrelated Arcobacter c-type cytochrome to perform the same function. IMPORTANCE The study of dissimilatory perchlorate-reducing bacteria (DPRB) has largely focused on freshwater, mesophilic, neutral-pH environments. This study identifies a novel marine DPRB in the genus Arcobacter that represents the first description of a DPRB associated with the Campylobacteraceae. Strain CAB is currently the only epsilonproteobacterial DPRB in pure culture. The genome of strain CAB lacks the pcrC gene found in all

  9. Effect of Electron Donor and Solution Chemistry on Products of Dissimilatory Reduction of Technetium by Shewanella putrefaciens

    Science.gov (United States)

    Wildung, R. E.; Gorby, Y. A.; Krupka, K. M.; Hess, N. J.; Li, S. W.; Plymale, A. E.; McKinley, J. P.; Fredrickson, J. K.

    2000-01-01

    To help provide a fundamental basis for use of microbial dissimilatory reduction processes in separating or immobilizing 99Tc in waste or groundwaters, the effects of electron donor and the presence of the bicarbonate ion on the rate and extent of pertechnetate ion [Tc(VII)O4−] enzymatic reduction by the subsurface metal-reducing bacterium Shewanella putrefaciens CN32 were determined, and the forms of aqueous and solid-phase reduction products were evaluated through a combination of high-resolution transmission electron microscopy, X-ray absorption spectroscopy, and thermodynamic calculations. When H2 served as the electron donor, dissolved Tc(VII) was rapidly reduced to amorphous Tc(IV) hydrous oxide, which was largely associated with the cell in unbuffered 0.85% NaCl and with extracellular particulates (0.2 to 0.001 μm) in bicarbonate buffer. Cell-associated Tc was present principally in the periplasm and outside the outer membrane. The reduction rate was much lower when lactate was the electron donor, with extracellular Tc(IV) hydrous oxide the dominant solid-phase reduction product, but in bicarbonate systems much less Tc(IV) was associated directly with the cell and solid-phase Tc(IV) carbonate may have been present. In the presence of carbonate, soluble (<0.001 μm) electronegative, Tc(IV) carbonate complexes were also formed that exceeded Tc(VII)O4− in electrophoretic mobility. Thermodynamic calculations indicate that the dominant reduced Tc species identified in the experiments would be stable over a range of Eh and pH conditions typical of natural waters. Thus, carbonate complexes may represent an important pathway for Tc transport in anaerobic subsurface environments, where it has generally been assumed that Tc mobility is controlled by low-solubility Tc(IV) hydrous oxide and adsorptive, aqueous Tc(IV) hydrolysis products. PMID:10831424

  10. Experimental constraints on Fe isotope fractionation during magnetite and Fe carbonate formation coupled to dissimilatory hydrous ferric oxide reduction

    Science.gov (United States)

    Johnson, Clark M.; Roden, Eric E.; Welch, Susan A.; Beard, Brian L.

    2005-02-01

    , magnetite from BIFs that has δ 56Fe ≤0‰ apparently requires formation from aqueous Fe(II) that had very low δ 56Fe values. Based on this experimental study, formation of low-δ 56Fe Fe(II) aq in nonsulfidic systems seems most likely to have been produced by dissimilatory reduction of ferric oxides by Fe(III)-reducing bacteria.

  11. Glutathione-dependent reduction of arsenate by glycogen phosphorylase a reaction coupled to glycogenolysis.

    Science.gov (United States)

    Németi, Balázs; Gregus, Zoltán

    2007-11-01

    Arsenate (As(V)) is reduced in the body to the more toxic arsenite (As(III)). We have shown that two enzymes catalyzing phosphorolytic cleavage of their substrates, namely purine nucleoside phosphorylase and glyceraldehyde-3-phosphate dehydrogenase, can reduce As(V) in presence of an appropriate thiol and their substrates. Another phosphorolytic enzyme that may also reduce As(V) is glycogen phosphorylase (GP). With inorganic phosphate (P(i)), GP catalyzes the breakdown of glycogen to glucose-1-phosphate; however, it also accepts As(V). Testing the hypothesis that GP can reduce As(V), we incubated As(V) with the phosphorylated GPa or the dephosphorylated GPb purified from rabbit muscle and quantified the As(III) formed from As(V) by high-performance liquid chromatography-hydride generation-atomic fluorescence spectrometry. In the presence of adenosine monophosphate (AMP), glycogen, and glutathione (GSH), both GP forms reduced As(V) at rates increasing with enzyme and As(V) concentrations. The As(V) reductase activity of GPa was 10-fold higher than that of GPb. However, incubating GPb with GP kinase and ATP (that converts GPb to GPa) increased As(V) reduction by phosphorylase up to the rate produced by GPa incubated under the same conditions. High concentration of inorganic sulfate, which activates GPb like phosphorylation, also promoted reduction of As(V) by GPb. As(V) reduction by GPa (like As(V) reduction in rats) required GSH. It also required glycogen (substrate for GP) and was stimulated by AMP (allosteric activator of GP) even at low micromolar concentrations. P(i), substrate for GP competing with As(V), inhibited As(III) formation moderately at physiological concentrations. Glucose-1-phosphate, the product of GP-catalyzed glycogenolysis, also decreased As(V) reduction. Summarizing, GP is the third phosphorolytic enzyme identified capable of reducing As(V) in vitro. For reducing As(V) by GP, GSH and glycogen are indispensable, suggesting that the reduction is

  12. Solubility and dissimilatory reduction kinetics of iron(III) oxyhydroxides: A linear free energy relationship

    Science.gov (United States)

    Bonneville, Steeve; Behrends, Thilo; Van Cappellen, Philippe

    2009-09-01

    Rates of reduction of Fe(III) oxyhydroxides by the bacterium Shewanella putrefaciens were measured as a function of the bacterial density and the Fe(III) substrate concentration. The results show that an earlier reported positive correlation between the solubility products ( ∗K so) and the maximum cell-specific reduction rates ( vmax) of predominantly poorly crystalline Fe(III) oxyhydroxides also applies to insoluble and crystalline Fe(III) oxyhydroxides. The mineral solubilities were measured by a dialysis bag technique under acidic conditions (pH 1 up to 2.5) at 25 °C. Initial iron reduction rates by S. putrefaciens were determined in the presence of excess lactate as electron donor. In all cases, the microbial reduction rate exhibited saturation behavior with respect to the Fe(III) oxyhydroxide concentration. On a double logarithmic scale, the maximum rates vmax and the solubility products defined a single linear free energy relationship (LFER) for all the Fe(III) oxyhydroxides considered. The solubility provided a better predictor of vmax than the specific surface area of the mineral phase. A rate limitation by the electron transfer between an iron reductase and a Fe(III) center, or by the subsequent desorption of Fe 2+ from the iron oxide mineral surface, are both consistent with the observed LFER.

  13. Kinetics of microbially mediated reactions: dissimilatory sulfate reduction in saltmarsh sediments (Sapelo Island, Georgia, USA)

    Science.gov (United States)

    Roychoudhury, Alakendra N.; Van Cappellen, Philippe; Kostka, Joel E.; Viollier, Eric

    2003-04-01

    A sediment disk reactor was tested in once flow-through mode to retrieve kinetic parameters for the Monod rate law that describes sulfate reduction. The experimental method was compared with a previously described procedure by the authors where a sediment plug-flow reactor was operated in a recirculation mode. In recirculation mode, accumulation of metabolic byproducts in certain cases may result in negative feedback, thus preventing accurate determination of kinetic information. The method described in this article provides an alternative to the recirculation sediment plug-flow-through reactor technique for retrieving kinetic parameters of microbially mediated reactions in aquatic sediments. For sulfate reduction in a saltmarsh site, a maximum estimate of the half-saturation concentration, Ks, of 204±26 μM and a maximum reaction rate, Rm, of 2846±129 nmol cm( wet sediment ) 3 d-1 was determined. The Ks value obtained was consistent with the one estimated previously (K s=240±20 μM) from a different site within the same saltmarsh mud flat using a recirculating reactor. From the Rm value and reduction rates determined using 35SO 42- incubation experiments, we infer that sulfate reduction is limited in the field. Substrate availability is not the main contributor for the limitation, however. Competition from other microbes, such as iron reducers affects the activity of sulfate reducers in the suboxic to anoxic zones, whereas aerobes compete in the oxic zone. High sulfide concentration in the pore water may also have acted as a toxin to the sulfate reducers in the field.

  14. Dissimilatory Reduction of Fe(III) and Other Electron Acceptors by a Thermus Isolate

    Energy Technology Data Exchange (ETDEWEB)

    Kieft, T. L. [New Mexico Inst. of Mining and Technology, Socorro, NM (United States); Fredrickson, J. K. [Pacific Northwest National Lab., Richland, WA (United States); Onstott, T. C. [Princeton Univ., NJ (United States). Dept. of Geological and Geophysical Sciences; Gorby, Y. A. [Pacific Northwest National Lab., Richland, WA (United States); Kostandarithes, H. M. [Pacific Northwest National Lab., Richland, WA (United States); Bailey, T. J. [Pacific Northwest National Lab., Richland, WA (United States); Kennedy, D. W. [Pacific Northwest National Lab., Richland, WA (United States); Li, S. W. [Pacific Northwest National Lab., Richland, WA (United States); Plymale, A. E. [Pacific Northwest National Lab., Richland, WA (United States); Spadoni, C. M. [Pacific Northwest National Lab., Richland, WA (United States); Gray, M. S. [Pacific Northwest National Lab., Richland, WA (United States)

    1995-10-25

    A thermophilic bacterium that could use O{sub 2}, NO{sub 3}{sup -}, Fe(III), or S{sup o} as terminal electron acceptors for growth was isolated from groundwater sampled at 3.2 km depth in a South African gold mine. This organism, designated SA-01, clustered most closely with members of the genus Thermus, as determined by 16S rDNA gene sequence analysis. The 16S rDNA sequence of SA-01 was >98% similar to that of Thermus strain NMX2 A.1, which was previously isolated by other investigators from a thermal spring in New Mexico. Strain NMX2 A.1 was also able to reduce Fe(III) and other electron acceptors, whereas Thermus aquaticus (ATCC 25104) and Thermus filiformis (ATCC 43280) did not reduce NO{sub 3}{sup -} or Fe(III). Neither SA-01 nor NMX2 A.1 grew fermentatively, i.e., addition of an external electron acceptor was required for anaerobic growth. Thermus SA-01 reduced soluble Fe(III) complexed with citrate or nitrilotriacetic acid (NTA); however, it could only reduce relatively small quantities (0.5 mM) of hydrous ferric oxide (HFO) except when the humic acid analog 2,6-anthraquinone disulfonate (AQDS) was added as an electron shuttle, in which case 10 mM Fe(III) was reduced. Fe(III)-NTA was reduced quantitatively to Fe(II), was coupled to the oxidation of lactate, and could support growth through three consecutive transfers. Suspensions of Thermus SA-01 cells also reduced Mn(IV), Co(III)-EDTA, Cr(VI), and AQDS. Mn(IV)-oxide was reduced in the presence of either lactate or H{sub 2}. Both strains were also able to mineralize NTA to CO{sub 2} and to couple its oxidation to Fe(III) reduction and growth. The optimum temperature for growth and Fe(III) reduction by Thermus SA-01 and NMX2 A.1 is approximately 65 C; optimum pH is 6.5 to 7.0. This is the first report of a Thermus sp. being able to couple the oxidation of organic compounds to the reduction of Fe, Mn or S.

  15. Dissimilatory Reduction of Fe(III) and Other Electron Acceptors by a Thermus Isolate

    Energy Technology Data Exchange (ETDEWEB)

    Kieft, T. L. [New Mexico Inst. of Mining and Technology, Socorro, NM (United States); Fredrickson, J. K. [Pacific Northwest National Lab., Richland, WA (United States); Onstott, T. C. [Princeton Univ., NJ (United States). Dept. of Geological and Geophysical Sciences; Gorby, Y. A. [Pacific Northwest National Lab., Richland, WA (United States); Kostandarithes, H. M. [Pacific Northwest National Lab., Richland, WA (United States); Bailey, T. J. [Pacific Northwest National Lab., Richland, WA (United States); Kennedy, D. W. [Pacific Northwest National Lab., Richland, WA (United States); Li, S. W. [Pacific Northwest National Lab., Richland, WA (United States); Plymale, A. E. [Pacific Northwest National Lab., Richland, WA (United States); Spadoni, C. M. [Pacific Northwest National Lab., Richland, WA (United States); Gray, M. S. [Pacific Northwest National Lab., Richland, WA (United States)

    1995-10-25

    A thermophilic bacterium that could use O{sub 2}, NO{sub 3}{sup -}, Fe(III), or S{sup o} as terminal electron acceptors for growth was isolated from groundwater sampled at 3.2 km depth in a South African gold mine. This organism, designated SA-01, clustered most closely with members of the genus Thermus, as determined by 16S rDNA gene sequence analysis. The 16S rDNA sequence of SA-01 was >98% similar to that of Thermus strain NMX2 A.1, which was previously isolated by other investigators from a thermal spring in New Mexico. Strain NMX2 A.1 was also able to reduce Fe(III) and other electron acceptors, whereas Thermus aquaticus (ATCC 25104) and Thermus filiformis (ATCC 43280) did not reduce NO{sub 3}{sup -} or Fe(III). Neither SA-01 nor NMX2 A.1 grew fermentatively, i.e., addition of an external electron acceptor was required for anaerobic growth. Thermus SA-01 reduced soluble Fe(III) complexed with citrate or nitrilotriacetic acid (NTA); however, it could only reduce relatively small quantities (0.5 mM) of hydrous ferric oxide (HFO) except when the humic acid analog 2,6-anthraquinone disulfonate (AQDS) was added as an electron shuttle, in which case 10 mM Fe(III) was reduced. Fe(III)-NTA was reduced quantitatively to Fe(II), was coupled to the oxidation of lactate, and could support growth through three consecutive transfers. Suspensions of Thermus SA-01 cells also reduced Mn(IV), Co(III)-EDTA, Cr(VI), and AQDS. Mn(IV)-oxide was reduced in the presence of either lactate or H{sub 2}. Both strains were also able to mineralize NTA to CO{sub 2} and to couple its oxidation to Fe(III) reduction and growth. The optimum temperature for growth and Fe(III) reduction by Thermus SA-01 and NMX2 A.1 is approximately 65 C; optimum pH is 6.5 to 7.0. This is the first report of a Thermus sp. being able to couple the oxidation of organic compounds to the reduction of Fe, Mn or S.

  16. Dissimilatory Sb(V) reduction by microorganisms isolated from Sb-contaminated sediment

    Science.gov (United States)

    Dovick, M. A.; Kulp, T. R.

    2013-12-01

    Mining and smelting are major sources of trace metal contamination in freshwater systems. Arsenic (As) is a common contaminant derived from certain mining operations and is a known toxic metalloid and carcinogen. Antimony (Sb) is listed as a pollutant of priority interest by the EPA and is presumed to share similar geochemical and toxicological properties with arsenic. Both elements can occur in four different oxidation states (V, III, 0, and -III) under naturally occurring conditions. In aqueous solutions As(V) and Sb(V) predominate in oxygenated surface waters whereas As(III) and Sb(III) are stable in anoxic settings. Numerous studies have examined microbiological redox pathways that utilize As(V) as a terminal electron acceptor for anaerobic respiration, however there have been few studies on microbial mechanisms that may affect the biogeochemical cycling of Sb in the environment. Here we report bacterial reduction of Sb(V) to Sb(III) in anoxic enrichment cultures and bacterial isolates grown from sediment collected from an Sb contaminated pond at a mine tailings site in Idaho (total pond water Sb concentration = 235.2 +/- 136.3 ug/L). Anaerobic sediment microcosms (40 mL) were established in artificial freshwater mineral salt medium, amended with millimolar concentrations of Sb(V), acetate or lactate, and incubated at 27°C for several days. Antimony(V), lactate, and acetate concentrations were monitored during incubation by High Performance Liquid Chromatography (HPLC) and Ion Chromatography (IC). Live sediment microcosms reduced millimolar amendments of Sb(V) to Sb(III) coupled to the oxidation of acetate and lactate, while no activity occurred in killed controls. Enrichment cultures were established by serially diluting Sb(V)-reducing microcosms in mineral salt medium with Sb(V) and acetate, and a Sb(V)-reducing bacterial strain was isolated by plating on anaerobic agar plates amended with millimolar Sb(V) and acetate. Direct cell counting demonstrated that

  17. Influence of organic carbon and nitrate loading on partitioning between dissimilatory nitrate reduction to ammonium (DNRA) and N2 production

    Science.gov (United States)

    Hardison, Amber K.; Algar, Christopher K.; Giblin, Anne E.; Rich, Jeremy J.

    2015-09-01

    Biologically available nitrogen is removed from ecosystems through the microbial processes of anaerobic ammonium oxidation (anammox) or denitrification, while dissimilatory nitrate reduction to ammonium (DNRA) retains it. A mechanistic understanding of controls on partitioning among these pathways is currently lacking. The objective of this study was to conduct a manipulative experiment to determine the influence of organic C and NO3- loading on partitioning. Sediment was collected from a location on the southern New England shelf (78 m water depth) and sieved. Half of the sediment was mixed with freeze-dried phytoplankton and the other half was not. Sediment was then spread into 1.5 mm, "thin discs" closed at the bottom and placed in large aquarium tanks with filtered, N2/CO2 sparged seawater to maintain O2 limited conditions. Half of the discs received high NO3- loading, while the other half received low NO3- loading, resulting in a multifactorial design with four treatments: no C addition, low NO3- (-C-N); C addition, low NO3- (+C-N); no C addition, high NO3- (-C+N); and C addition, high NO3- (+C+N). Sediment discs were incubated in the tanks for 7 weeks, during which time inorganic N (NH4+, NO3-, and NO2-) was monitored, and sediment discs were periodically removed from the tanks to conduct 15N isotope labeling experiments in vials to measure potential rates of anammox, denitrification, and DNRA. Temporal dynamics of inorganic N concentrations in the tanks were indicative of anoxic N metabolism, with strong response of the build up or consumption of the intermediate NO2-, depending on treatments. Vial incubation experiments with added 15NO2- + 14NH4+ indicated significant denitrification and DNRA activity in sediment thin discs, but incubations with added 15NH4+ + 14NO2- indicated anammox was not at all significant. Inorganic N concentrations in the tanks were fit to a reactive transport model assuming different N transformations. Organic C decomposition rates

  18. Role of Siderophores in Dissimilatory Iron Reduction in Arctic Soils : Effect of Direct Amendment of Siderophores to Arctic Soil

    Science.gov (United States)

    Srinivas, A. J.; Dinsdale, E. A.; Lipson, D.

    2014-12-01

    Dissimilatory iron reduction (DIR), where ferric iron (Fe3+) is reduced to ferrous iron (Fe2+) anaerobically, is an important respiratory pathway used by soil bacteria. DIR contributes to carbon dioxide (CO2) efflux from the wet sedge tundra biome in the Arctic Coastal Plain (ACP) in Alaska, and could competitively inhibit the production of methane, a stronger greenhouse gas than CO2, from arctic soils. The occurrence of DIR as a dominant anaerobic process depends on the availability of substantial levels of Fe3+ in soils. Siderophores are metabolites made by microbes to dissolve Fe3+ from soil minerals in iron deficient systems, making Fe3+ soluble for micronutrient uptake. However, as the ACP is not iron deficient, siderophores in arctic soils may play a vital role in anaerobic respiration by dissolving Fe3+ for DIR. We studied the effects of direct siderophore addition to arctic soils through a field study conducted in Barrow, Alaska, and a laboratory incubation study conducted at San Diego State University. In the field experiment, 50μM deferroxamine mesylate (a siderophore), 50μM trisodium nitrilotriacetate (an organic chelator) or an equal volume of water was added to isolated experimental plots, replicated in clusters across the landscape. Fe2+ concentrations were measured in soil pore water samples collected periodically to measure DIR over time in each. In the laboratory experiment, frozen soil samples obtained from drained thaw lake basins in the ACP, were cut into cores and treated with the above-mentioned compounds to the same final concentrations. Along with measuring Fe2+ concentrations, CO2 output was also measured to monitor DIR over time in each core. Experimental addition of siderophores to soils in both the field and laboratory resulted in increased concentrations of soluble Fe3+ and a sustained increase in Fe2+concentrations over time, along with increased respiration rates in siderophore-amended cores. These results show increased DIR in

  19. Dissimilatory reduction of FeIII (EDTA) with microorganisms in the system of nitric oxide removal from the flue gas by metal chelate absorption

    Institute of Scientific and Technical Information of China (English)

    MA Bi-yao; LI Wei; JING Guo-hua; SHI Yao

    2004-01-01

    In the system of nitric oxide removal from the flue gas by metal chelate absorption, it is an obstacle that ferrous absorbents are easily oxidized by oxygen in the flue gas to ferric counterparts, which are not capable of binding NO. By adding iron metal or electrochemical method, FeIII (EDTA) can be reduced to FeII (EDTA). However, there are various drawbacks associated with these techniques. The dissimilatory reduction of FeIII (EDTA) with microorganisms in the system of nitric oxide removal by metal chelate absorption was investigated. Ammonium salt instead of nitrate was used as the nitrogen source, as nitrates inhibited the reduction of FeIII due to the competition between the two electron acceptors. Supplemental glucose and lactate stimulated the formation of FeII more than ethanol as the carbon sources. The microorganisms cultured at 50℃ were not very sensitive to the other experimental temperature, the reduction percentage of FeIII varied little with the temperature range of 30~50℃. Concentrated Na2CO3 solution was added to adjust the solution pH to an optimal pH range of 6~7. The overall results revealed that the dissimilatory ferric reducing microorganisms present in the mix-culture are probably neutrophilic, moderately thermophilic FeIII reducers.

  20. Multiple sulfur isotope signatures of sulfite and thiosulfate reduction by the model dissimilatory sulfate-reducer, Desulfovibrio alaskensis str. G20

    Directory of Open Access Journals (Sweden)

    William D. Leavitt

    2014-11-01

    Full Text Available Dissimilatory sulfate reduction serves as a key metabolic carbon remineralization process in anoxic marine environments. Sulfate reducing microorganisms can impart a wide range in mass-dependent sulfur isotopic fractionation. As such, the presence and relative activity of these organisms is identifiable from geological materials. By extension, sulfur isotope records are used to infer the redox balance of marine sedimentary environments, and the oxidation state of Earth’s oceans and atmosphere. However, recent work suggests that our understanding of microbial sulfate reducers (MSRs may be missing complexity associated with the presence and role of key chemical intermediates in the reductive process. This study provides a test of proposed metabolic models of sulfate reduction by growing an axenic culture of the well-studied MSRs, Desulfovibrio alaskensis strain G20, under electron donor limited conditions on the terminal electron acceptors sulfate, sulfite or thiosulfate, and tracking the multiple S isotopic consequences of each condition set. The dissimilatory reduction of thiosulfate and sulfite produce unique minor isotope effects, as compared to the reduction of sulfate. Further, these experiments reveal a complex biochemistry associated with sulfite reduction. That is, under high sulfite concentrations, sulfur is shuttled to an intermediate pool of thiosulfate. Site-specific isotope fractionation (within thiosulfate is very large (34ε ~ 30‰ while terminal product sulfide carries only a small fractionation from the initial sulfite (34ε < 10‰: a signature similar in magnitude to sulfate and thiosulfate reduction. Together these findings show that microbial sulfate reduction (MSR is highly sensitive to the concentration of environmentally important sulfur-cycle intermediates (sulfite and thiosulfate, especially when thiosulfate and the large site-specific isotope effects are involved.

  1. Characterization of extracellular minerals produced during dissimilatory Fe(III) and U(VI) reduction at 100 degrees C by Pyrobaculum islandicum.

    Science.gov (United States)

    Kashefi, K; Moskowitz, B M; Lovley, D R

    2008-03-01

    In order to gain insight into the significance of biotic metal reduction and mineral formation in hyperthermophilic environments, metal mineralization as a result of the dissimilatory reduction of poorly crystalline Fe(III) oxide, and U(VI) reduction at 100 degrees C by Pyrobaculum islandicum was investigated. When P. islandicum was grown in a medium with poorly crystalline Fe(III) oxide as an electron acceptor and hydrogen as an electron donor, the Fe(III) oxide was reduced to an extracellular, ultrafine-grained magnetite with characteristics similar to that found in some hot environments and that was previously thought to be of abiotic origin. Furthermore, cell suspensions of P. islandicum rapidly reduced the soluble and oxidized form of uranium, U(VI), to extracellular precipitates of the highly insoluble U(IV) mineral, uraninite (UO(2)). The reduction of U(VI) was dependent on the presence of hydrogen as the electron donor. These findings suggest that microbes may play a key role in metal deposition in hyperthermophilic environments and provide a plausible explanation for such phenomena as magnetite accumulation and formation of uranium deposits at ca. 100 degrees C.

  2. Phylogeny of the alpha and beta subunits of the dissimilatory adenosine-5'-phosphosulfate (APS) reductase from sulfate-reducing prokaryotes--origin and evolution of the dissimilatory sulfate-reduction pathway.

    Science.gov (United States)

    Meyer, Birte; Kuever, Jan

    2007-07-01

    Newly developed PCR assays were used to PCR-amplify and sequence fragments of the dissimilatory adenosine-5'-phosphosulfate (APS) reductase genes (aprBA) comprising nearly the entire gene locus (2.2-2.4 kb, equal to 92-94 % of the protein coding sequence) from 75 sulfate-reducing prokaryotes (SRP) of a taxonomically wide range. Comparative phylogenetic analysis included all determined and publicly available AprBA sequences from SRP and selected homologous sequences of sulfur-oxidizing bacteria (SOB). The almost identical AprB and AprA tree topologies indicated a shared evolutionary path for the aprBA among the investigated SRP by vertical inheritance and concomitant lateral gene transfer (LGT). The topological comparison of AprB/A- and 16S rRNA gene-based phylogenetic trees revealed novel LGT events across the SRP divisions. Compositional gene analysis confirmed Thermacetogenium phaeum to be the first validated strain affected by a recent lateral transfer of aprBA as a putative effect of long-term co-cultivation with a Thermodesulfovibrio species. Interestingly, the Apr proteins of SRP and SOB diverged into two phylogenetic lineages, with the SRP affiliated with the green sulfur bacteria, e.g. Chlorobaculum tepidum, while the Allochromatium vinosum-related sequences formed a distinct group. Analysis of genome data indicated that this phylogenetic separation is also reflected in the differing presence of the putative proteins functionally associated with Apr, QmoABC complex (quinone-interacting membrane-bound oxidoreductase) and AprM (transmembrane protein). Scenarios for the origin and evolution of the dissimilatory APS reductase are discussed within the context of the dissimilatory sulfite reductase (DsrAB) phylogeny, the appearance of QmoABC and AprM in the SRP and SOB genomes, and the geochemical setting of Archean Earth.

  3. Seasonal variation in denitrification and dissimilatory nitrate reduction to ammonia process rates and corresponding key functional genes along an estuarine nitrate gradient

    Directory of Open Access Journals (Sweden)

    Cindy J Smith

    2015-06-01

    Full Text Available This research investigated spatial-temporal variation in benthic bacterial community structure, rates of denitrification and dissimilatory nitrate reduction to ammonium (DNRA processes and abundances of corresponding genes and transcripts at three sites – the estuary-head, mid-estuary and the estuary mouth along the nitrate gradient of the Colne estuary over an annual cycle. Denitrification rates declined down the estuary, while DNRA rates were higher at the estuary head and middle than the estuary mouth. In four out of the six two-monthly time-points, rates of DNRA were greater than denitrification at each site. Abundance of gene markers for nitrate-reduction (nitrate reductase narG and napA, denitrification (nitrite reductase nirS and DNRA (DNRA nitrite reductase nrfA declined along the estuary with significant relationships between denitrification and nirS abundance, and DNRA and nrfA abundance. Spatially, rates of denitrification, DNRA and corresponding functional gene abundances decreased along the estuary. However, temporal correlations between rate processes and functional gene and transcript abundances were not observed.

  4. Identifying the role of cytochromes upon the attachment, growth and detachment of Shewanella oneidensis MR-1 on hematite during dissimilatory iron reduction under natural- flow conditions

    Science.gov (United States)

    Mitchell, A. C.; Geesey, G. G.

    2006-12-01

    Current understanding of bacterial respiration by dissimilatory iron (Fe) reduction is based primarily on studies of closed systems using soluble Fe(III). However, natural environments likely to support Fe reduction are typically open systems and contain Fe(III) primarily in the form of crystalline (hydr)oxides. Mechanisms by which electrons are transported between bacteria and mineral terminal electron acceptors (TEAs) under open system conditions are still poorly understood. However, a number of cytochromes have been identified as potentially playing a critical role in the electron transport system of some Fe reducing bacteria. Experiments were performed using (i) omcA, (ii) mtrC, or (iii) omcA and mtrC cytochrome deficient mutants of the Fe-reducing bacteria, Shewanella oneidensis MR-1, in transparent-window flow- reactors containing hematite as the only TEA. These were operated under defined hydrodynamic and anaerobic conditions. Cells expressed green fluorescent protein (gfp), allowing real time measurement of cells at the mineral surface by epifluorescence microscopy. Cytochromes which play a critical role in the anaerobic growth of S. Oneidensis by Fe reduction under open system natural-flow conditions could then be identified. Differences in the accumulation, maximum density, detachment and total production of surface-associated cells growing on hematite surfaces were apparent between the mutants, and between the mutants and the wild-type. Mutants deficient in cytochromes grew to a lower max density by up to 2 orders of magnitude than the wild-type, and exhibited no reduced Fe in the reactor effluent or at the surface of the hematite at the conclusion of the experiment, as revealed by X-Ray photoelectron spectroscopy (XPS). Therefore omcA and / or mtrC cytochromes appear critical for electron shuttling and anaerobic growth of S. Oneidensis on hematite under natural-flow conditions.

  5. Characterisation of the dissimilatory reduction of Fe(III)-oxyhydroxide at the microbe-mineral interface: the application of STXM-XMCD.

    Science.gov (United States)

    Coker, V S; Byrne, J M; Telling, N D; VAN DER Laan, G; Lloyd, J R; Hitchcock, A P; Wang, J; Pattrick, R A D

    2012-07-01

    A combination of scanning transmission X-ray microscopy and X-ray magnetic circular dichroism was used to spatially resolve the distribution of different carbon and iron species associated with Shewanella oneidensis MR-1 cells. S. oneidensis MR-1 couples the reduction of Fe(III)-oxyhydroxides to the oxidation of organic matter in order to conserve energy for growth. Several potential mechanisms may be used by S. oneidensis MR-1 to facilitate Fe(III)-reduction. These include direct contact between the cell and mineral surface, secretion of either exogenous electron shuttles or Fe-chelating agents and the production of conductive 'nanowires'. In this study, the protein/lipid signature of the bacterial cells was associated with areas of magnetite (Fe₃O₄), the product of dissimilatory Fe(III) reduction, which was oversaturated with Fe(II) (compared to stoichiometric magnetite). However, areas of the sample rich in polysaccharides, most likely associated with extracellular polymeric matrix and not in direct contact with the cell surface, were undersaturated with Fe(II), forming maghemite-like (γ-Fe₂O₃) phases compared to stoichiometric magnetite. The reduced form of magnetite will be much more effective in environmental remediation such as the immobilisation of toxic metals. These findings suggest a dominant role for surface contact-mediated electron transfer in this study and also the inhomogeneity of magnetite species on the submicron scale present in microbial reactions. This study also illustrates the applicability of this new synchrotron-based technique for high-resolution characterisation of the microbe-mineral interface, which is pivotal in controlling the chemistry of the Earth's critical zone.

  6. Dissimilatory reduction of perchlorate and other common pollutants by a consortium enriched from tidal flats of the Yellow Sea

    Institute of Scientific and Technical Information of China (English)

    Nirmala Bardiya; Jae-Ho Bae

    2015-01-01

    Objective: To enrich a facultative anaerobic bacterial consortium from the Yellow Sea and assess its ability to reduce perchlorate and other co-pollutants. Methods: Bacterial consortium collected from the tidal flats of the Yellow Sea was enriched in an anoxic medium containing perchlorate as the electron (e-) acceptor and acetate as the electron (e-) donor. The enriched consortium was then tested for perchlorate reduction under different perchlorate concentrations and in the presence of nitrate by using standard anaerobic techniques. The complete enzymatic reduction of perchlorate to chloride was confirmed by chlorite dismutation. Ability of the consortium to grow with alternate e- acceptors was also tested with acetate as the e- donor. Results: The enriched consortium could rapidly reduce perchlorate up to the initial concentration of 25.65 mmol/L. In the presence of nitrate, perchlorate reduction did not occur immediately and reduction of nitrate started after a lag phase, with concomitant accumulation of nitrite. The perchlorate-enriched consortium could reduce chlorate, oxygen, Cr (VI), and selenate as the alternate e- acceptors but failed to utilize sulfate, thiosulfate, sulfite, and nitrite. Conclusions: The consortium from the tidal flats of the Yellow Sea could reduce perchlorate and co-contaminants such as chlorate, nitrate, Cr (VI), and selenate under heterotrophic conditions with acetate as the e- donor and carbon source. While perchlorate was completely dismutated into innocuous chloride and oxygen, accumulation of nitrite occurred during the reduction of nitrate.

  7. Understanding the hydrologic control of N cycle: Effect of water filled pore space on heterotrophic nitrification, denitrification and dissimilatory nitrate reduction to ammonium mechanisms in unsaturated soils

    Science.gov (United States)

    Mekala, C.; Nambi, Indumathi M.

    2017-07-01

    Irrigation practice will be effective if it supplies optimal water and nutrients to crops and act as a filter for contaminants leaching to ground water. There is always a scope for improving the fertilizer use efficiency and scheduling of wastewater irrigation if the fate and transport of nutrients particularly nitrogenous compounds in the soil are well understood. In the present study, nitrogen transport experiments for two different agricultural soils are performed under varying saturation 33, 57, 78% water filled pore space for sandy soil 1 and 52, 81 and 96% for loam soil 2. A HYDRUS 2D model with constructed wetland (CW2D) module could simulate aerobic nitrification and anoxic denitrification well for both soils and estimated the reaction kinetics. A hot spot of Dissimilatory Nitrate Reduction to Ammonium (DNRA) pathway has been observed at 81% moisture content for a loamy sand soil. The presence of high organic content and reductive soil environment (5.53 C/NO3- ratio; ORP = - 125 mV) results in ammonium accumulation of 16.85 mg in the soil. The overall observation from this study is nitrification occurs in a wide range of saturations 33-78% with highest at 57% whereas denitrification is significant at higher water saturations 57-78% for sandy soil texture. For a loamy sand soil, denitrification is dominant at 96% saturation with least nitrification at all saturation studies. The greatest nitrogen losses (> 90%) was observed for soil 2 while 30-70% for soil1. The slow dispersive subsurface transport with varying oxygen dynamics enhanced nitrogen losses from soil2 due to lesser soil permeability. This in turn, prevents NO3- leaching and groundwater contamination. This type of modeling study should be used before planning field experiments for designing optimal irrigation and fertigation schedules.

  8. Influence of arsenate adsorption to ferrihydrite, goethite, and boehmite on the kinetics of arsenate reduction by Shewanella putrefaciens strain CN-32.

    Science.gov (United States)

    Huang, Jen-How; Voegelin, Andreas; Pombo, Silvina A; Lazzaro, Anna; Zeyer, Josef; Kretzschmar, Ruben

    2011-09-15

    The kinetics of As(V) reduction by Shewanella putrefaciens strain CN-32 was investigated in suspensions of 0.2, 2, or 20 g L(-1) ferrihydrite, goethite, or boehmite at low As (10 μM) and lactate (25 μM) concentrations. Experimental data were compared with model predictions based on independently determined sorption isotherms and rates of As(V) desorption, As(III) adsorption, and microbial reduction of dissolved As(V), respectively. The low lactate concentration was chosen to prevent significant Fe(III) reduction, but still allowing complete As(V) reduction. Reduction of dissolved As(V) followed first-order kinetics with a 3 h half-life of As(V). Addition of mineral sorbents resulted in pronounced decreases in reduction rates (32-1540 h As(V) half-life). The magnitude of this effect increased with increasing sorbent concentration and sorption capacity (goethite putrefaciens (∼5 × 10(9) cells mL(-1)), suggesting that attachment of S. putrefaciens cells to oxide mineral surfaces promoted As(V) desorption and thereby facilitated As(V) reduction. The interplay between As(V) sorption to mineral surfaces and bacterially induced desorption may thus be critical in controlling the kinetics of As reduction and release in reducing soils and sediments.

  9. Ammonia oxidation, denitrification and dissimilatory nitrate reduction to ammonium in two US Great Basin hot springs with abundant ammonia-oxidizing archaea.

    Science.gov (United States)

    Dodsworth, Jeremy A; Hungate, Bruce A; Hedlund, Brian P

    2011-08-01

    Many thermophiles catalyse free energy-yielding redox reactions involving nitrogenous compounds; however, little is known about these processes in natural thermal environments. Rates of ammonia oxidation, denitrification and dissimilatory nitrate reduction to ammonium (DNRA) were measured in source water and sediments of two ≈ 80°C springs in the US Great Basin. Ammonia oxidation and denitrification occurred mainly in sediments. Ammonia oxidation rates measured using (15)N-NO(3)(-) pool dilution ranged from 5.5 ± 0.8 to 8.6 ± 0.9 nmol N g(-1) h(-1) and were unaffected or only mildly stimulated by amendment with NH(4) Cl. Denitrification rates measured using acetylene block ranged from 15.8 ± 0.7 to 51 ± 12 nmol N g(-1) h(-1) and were stimulated by amendment with NO(3)(-) and complex organic compounds. The DNRA rate in one spring sediment measured using an (15)N-NO(3)(-) tracer was 315 ± 48 nmol N g(-1) h(-1). Both springs harboured distinct planktonic and sediment microbial communities. Close relatives of the autotrophic, ammonia-oxidizing archaeon 'Candidatus Nitrosocaldus yellowstonii' represented the most abundant OTU in both spring sediments by 16S rRNA gene pyrotag analysis. Quantitative PCR (qPCR) indicated that 'Ca. N. yellowstonii'amoA and 16S rRNA genes were present at 3.5-3.9 × 10(8) and 6.4-9.0 × 10(8) copies g(-1) sediment. Potential denitrifiers included members of the Aquificales and Thermales. Thermus spp. comprised springs and suggest that ammonia oxidation may be a major source of energy fuelling primary production.

  10. Biogeochemical reductive release of soil embedded arsenate around a crater area (Guandu) in northern Taiwan using X-ray absorption near-edge spectroscopy

    Institute of Scientific and Technical Information of China (English)

    Kai-Ying Chiang; Tsan-Yao Chen; Chih-Hao Lee; Tsang-Lang Lin; Ming-Kuang Wang; Ling-Yun Jang; Jyh-Fu Lee

    2013-01-01

    This study investigates biogeochemical reductive release of arsenate from beudantite into solution in a crater area in northern Taiwan,using a combination of X-ray absorption near-edge structure (XANES) and atomic absorption spectrometry.Total arsenic (As)concentrations in the soil were more than 200 mg/kg.Over four months of laboratory experiments,less than 0.8% As was released into solution after reduction experiments.The 71% to 83% As was chemically reduced into arsenite (As(Ⅲ)) and partially weathering into the soluble phase.The kinetic dissolution and re-precipitation of As,Fe,Pb and sulfate in this area of paddy soils merits further study.

  11. "Artifactual" arsenate DNA

    DEFF Research Database (Denmark)

    Nielsen, Peter E

    2012-01-01

    The recent claim by Wolfe-Simon et al. that the Halomonas bacterial strain GFAJ-1 when grown in arsenate-containing medium with limiting phosphate is able to substitute phosphate with arsenate in biomolecules including nucleic acids and in particular DNA(1) arose much skepticism, primarily due...... to the very limited chemical stability of arsenate esters (see ref. 2 and references therein). A major part of the criticisms was concerned with the insufficient (bio)chemical evidence in the Wolfe-Simon study for the actual chemical incorporation of arsenate in DNA (and/or RNA). Redfield et al. now present...... evidence that the identification of arsenate DNA was artifactual....

  12. Arsenate resistance in the unicellular marine diazotroph Crocosphaera watsonii

    Directory of Open Access Journals (Sweden)

    Sonya eDyhrman

    2011-10-01

    Full Text Available The toxic arsenate ion can behave as a phosphate analog, and this can result in arsenate toxicity especially in areas with elevated arsenate to phosphate ratios like the surface waters of the ocean gyres. In these systems, cellular arsenate resistance strategies would allow phytoplankton to ameliorate the effects of arsenate transport into the cell. Despite the potential coupling between arsenate and phosphate cycling in oligotrophic marine waters, relatively little is known about arsenate resistance in the nitrogen-fixing marine cyanobacteria that are key components of the microbial community in low nutrient systems. The unicellular diazotroph, Crocosphaera watsonii WH8501, was able to grow at reduced rates with arsenate additions up to 30 nM, and estimated arsenate to phosphate ratios of 6:1. The genome of strain WH8501 contains homologs for arsA, arsH, arsB and arsC, allowing for the reduction of arsenate to arsenite and the pumping of arsenite out of the cell. The short-term addition of arsenate to the growth medium had no effect on nitrogen fixation. However, arsenate addition did result in the up-regulation of the arsB gene with increasing arsenate concentrations, indicating the induction of the arsenate detoxification response. The arsB gene was also up-regulated by phosphorus stress in concert with a gene encoding the high-affinity phosphate binding protein pstS. Both genes were down-regulated when phosphate was re-fed to phosphorus-stressed cells. A field survey of surface water from the low phosphate western North Atlantic detected expression of C. watsonii arsB, suggestive of the potential importance of arsenate resistance strategies in this and perhaps other systems.

  13. 异化Fe(Ⅲ)还原菌及其还原机制的环境意义%Dissimilatory Fe( Ⅲ)-reducing Bacteria and the Environmental Significance of Its Reduction Mechanism

    Institute of Scientific and Technical Information of China (English)

    曾洪学; 杨玉泉; 屈兴红; 黄灿

    2012-01-01

    Dissimilatory Fe( IE)-reducing bacteria with the powerful metabolism function, the ability to adapt to the harsh environment and strong reduction function have great importance to the biological remediation of environment and play a decisive role in the eco-eycle of earth. They were capable of using Fe( HI) as the terminal electron acceptor coupled with many kinds of inorganic and organic matter transformation to gain energy under anoxic conditions. Microbial dissimilatory iron reduction has several significant environmental impacts. It can greatly influence the biogeochemical cycles of many metals and plays an important role in the flux of phosphate into water supplies. In addition, it has been proven to have a good application perspective in microbiology fuel batteries, odor control and protecting steel from corrosion. However, whether it is the basic study, or application study, research related to micmbial dissimilatory iron reduction is still close to the blank in China. According to the latest research advances both at home and abroad, the environmental significance of microbial dissimilatory iron reduction is reviewed to attract more attention of the researchers and accelerate this field study in our country.%异化Fe(Ⅲ)还原菌具有强大的代谢功能和适应恶劣环境的能力,其所具有的还原功能对于环境的生物修复具有重要的意义,在地球生态循环过程中具有举足轻重的作用.厌氧条件下,它可以Fe(Ⅲ)为末端电子受体,还原许多有毒重金属,降解利用有机和无机污染物,对土壤中痕量金属元素和磷的释放产生重要影响,在微生物燃料电池、环境除臭、防止钢铁腐蚀等方面有较好的应用前景和研究价值.当前无论是基础还是应用研究方面,国内微生物异化Fe(Ⅲ)还原菌的相关工作仍近空白.结合国外的最新研究进展,介绍了微生物异化Fe(Ⅲ)还原菌特性、还原机制及其还原的环境意义,旨在引起国内相

  14. Natural Arsenate DNA?

    DEFF Research Database (Denmark)

    Nielsen, Peter E

    2011-01-01

    The recent paper by Wolfe-Simon et al.1 reporting a bacterial strain, which is able to grow in high concentrations of arsenate, apparently in the absence of phosphate, and claims that in this strain arsenate is substituting for phosphate, e.g. in nucleic acids (Figure 1), was highly profiled, att...

  15. Phylogenetic analysis and arsenate reduction effect of the arsenic-reducing bacteria enriched from contaminated soils at an abandoned smelter site

    Institute of Scientific and Technical Information of China (English)

    ZHANG Xuexia; JIA Yongfeng; WANG Xin; XU Liying

    2008-01-01

    Microbial reduction of As(V) (i.e., arsenate) plays an important role in arsenic (As) mobilization in aqueous environment. In this study, we investigated As(Ⅴ) reduction characteristics of the bacteria enriched from the arsenic-contaminated soil at an abandoned smelter site. It was found that As(Ⅴ) was completely reduced to As(Ⅲ) (i.e., arsenite) in 21 h. After 3-d incubation, a yellow solid was precipitated and the concentration of As(Ⅲ) decreased sharply. After 150 h incubation, ca. 65% of soluble arsenic was removed from the solution. The analysis of the precipitate by scanning electron microscopy and energy dispersive spectrometer (SEM-EDS) and X-ray diffraction (XRD) revealed that the main component was crystalline arsenic sulfide (ASS). Microbial mediated reduction and mobilization of adsorbed As(Ⅴ) on ferric hydroxide was also examined. In the microcosm slurry experiment, ca. 53% of the adsorbed As(V) was reduced to As(Ⅲ) by the bacteria, which resulted in an appreciable release of arsenic into aqueous phase. The released arsenic was present predominantly as As(Ⅲ). The microbial diversity was analyzed by 16S rDNA-dependent molecular phylogeny. A near-full-length 16S rDNA gene clone library was constructed. The 197 clones were analyzed using RFLP (restriction fragment length polymorphism) and 72 OTUs were obtained, which contributed 51% of the content for total clone number in six OTUs. Six bacterial clones in these six OTUs were selected for sequencing and the sequenced clones were found to belong to the group Caloramator, Clostridium, and Bacillus.

  16. Bacterial reduction and release of adsorbed arsenate on Fe(Ⅲ)-, Al-and coprecipitated Fe(Ⅲ)/Al-hydroxides

    Institute of Scientific and Technical Information of China (English)

    Xuexia Zhang; Yongfeng Jia; Shaofeng Wang; Rongrong Pan; Xudong Zhang

    2012-01-01

    Mobilization of arsenic under anaerobic conditions is of great concern in arsenic contaminated soils and sediments.Bacterial reduction of As(Ⅴ)and Fe(Ⅲ)influences the cycling and partitioning of arsenic between solid and aqueous phase.We investigated the impact of bacterially mediated reductions of Fe(Ⅲ)/A1 hydroxides-bound arsenic(Ⅴ)and iron(Ⅲ)oxides on arsenic release.Our results suggested that As(Ⅴ)reduction occurred prior to Fe(Ⅲ)reduction,and Fe(Ⅲ)reduction did not enhance the release of arsenic.Instead,Fe(Ⅲ)hydroxides retained their dissolved concentrations during the experimental process,even though the new iron mineral-magnetite formed.In contrast,the release of reduced As(Ⅲ)was promoted greatly when aluminum hydroxides was incorporated.Thus,the substitution of aluminum hydroxides may be responsible for the release of arsenic in the contaminated soils and sediments,since aluminum substitution of Fe(Ⅲ)hydroxides universally occurs under natural conditions.

  17. Development of a Molecular System for Studying Microbial Arsenate Respiration

    Science.gov (United States)

    Saltikov, C. W.; Newman, D. K.

    2002-12-01

    The toxic element arsenic is a major contaminant of many groundwaters and surface waters throughout the world. Arsenic enrichment is primarily of geological origin resulting from weathering processes and geothermal activity. Not surprisingly, microorganisms inhabiting anoxic arsenic-contaminated environments have evolved to exploit arsenate during respiration. Numerous bacteria have been isolated that use arsenate as a terminal electron acceptor for respiratory growth. The diversity of this metabolism appears to be widespread throughout the microbial tree of life, suggesting respiratory arsenate reduction is ancient in origin. Yet little is known about the molecular mechanisms for how these organisms respire arsenate. We have developed a model system in Shewanella trabarsenatis, strain ANA-3, a facultative anaerobe that respires arsenate and tolerates high concentrations of arsenite (10 mM). Through loss-of-function studies, we have identified genes involved in both arsenic resistance and arsenate respiration. The genes that confer resistance to arsenic are homologous to the well-characterized ars operon of E. coli. However, the respiratory arsenate reductase is predicted to encode a novel protein that shares homologous regions (~ 40 % similarity) to molybdopterin anaerobic reductases specific for DMSO, thiosulfate, nitrate, and polysulfide. I will discuss our emerging model for how strain ANA-3 respires arsenate and the relationship between arsenite resistance and arsenate respiration. I will also highlight the relevance of this type of analysis for biogeochemical studies.

  18. Response to arsenate treatment in Schizosaccharomyces pombe and the role of its arsenate reductase activity.

    Directory of Open Access Journals (Sweden)

    Alejandro Salgado

    Full Text Available Arsenic toxicity has been studied for a long time due to its effects in humans. Although epidemiological studies have demonstrated multiple effects in human physiology, there are many open questions about the cellular targets and the mechanisms of response to arsenic. Using the fission yeast Schizosaccharomyces pombe as model system, we have been able to demonstrate a strong activation of the MAPK Spc1/Sty1 in response to arsenate. This activation is dependent on Wis1 activation and Pyp2 phosphatase inactivation. Using arsenic speciation analysis we have also demonstrated the previously unknown capacity of S. pombe cells to reduce As (V to As (III. Genetic analysis of several fission yeast mutants point towards the cell cycle phosphatase Cdc25 as a possible candidate to carry out this arsenate reductase activity. We propose that arsenate reduction and intracellular accumulation of arsenite are the key mechanisms of arsenate tolerance in fission yeast.

  19. 奥奈达希瓦氏菌MR-1的Fe(Ⅲ)还原特性及其影响因素%Dissimilatory Fe(Ⅲ) reduction by Shewanclla oneidensis MR-1 and impact factors

    Institute of Scientific and Technical Information of China (English)

    陈洁; 储茵; 司友斌

    2011-01-01

    Dissimilatory Fe(Ul) reduction by Shewanclla oneidensis MR-1 was studied, and impact factors such as electronic donors, Fe(III) forms, dissolved oxygen content and pH were investigated. The results showed that Fereduction rates were 39.12%, 50.89% and 44.98% using the acetate, lactate and pyruvate as the sole electronic donor of strain MR-1, respectively. The forms of Fe(III) could influence their reduction, and iron reduction rates were 44.72%, 51.54% and 10.45% using ferric trichloride, ferric hydroxide and ferric citrate as the sole electronic receptor of strain MR-1, respectively. Dissolved oxygen inhibited the dissimilatory iron reduction. Strain MR-1 could reduce Fe(III) in the range of pH 5.0 to 9.0. The effects of protein denaturants SDS and OGP suggested that Fe(Ⅲ) reduction function proteins of strain MR-1 were mainly localized to the soluble outer membrane fraction. Tannins acid and pyrogallic acid could enhance Fe(III) reduction, and iron reduction rates were 76.37% and 68.73%, respectively.%研究奥奈达希瓦氏菌MR-1的Fe(Ⅲ)还原特性,并考察不同电子供体、不同形态Fe(Ⅲ)、溶解氧、pH等对奥奈达希瓦氏菌MR-1还原Fe(Ⅲ)的影响.结果表明,奥奈达希瓦氏菌MR-1对Fe(Ⅲ)有还原能力,以乙酸盐、乳酸盐和丙酮酸盐作为Fe(Ⅲ)还原的唯一电子供体,Fe(Ⅲ)还原率分别达到39.12%,50.89%和44.98%;以FeCl3、Fe(OH)3和柠檬酸铁等不同形态Fe(Ⅲ)为菌株MR-1的唯一电子受体,Fe(Ⅲ)还原率分别达到44.72%,51.54%和10.45%;溶解氧的存在可抑制Fe(Ⅲ)异化还原;菌株MR-1可在pH 5.0-9.0范围内进行Fe(Ⅲ)还原;两种不同的蛋白质变性剂SDS和OGP作用下的Fe(Ⅲ)还原结果表明,菌株MR-1的Fe(Ⅲ)还原功能蛋白主要位于细胞外膜;同时,投加一定量的单宁酸和焦性没食子酸可提高Fe(Ⅲ)还原率,螯合铁的还原率分别达到76.37%和68.73%.

  20. Respiratory arsenate reductase as a bidirectional enzyme

    Science.gov (United States)

    Richey, C.; Chovanec, P.; Hoeft, S.E.; Oremland, R.S.; Basu, P.; Stolz, J.F.

    2009-01-01

    The haloalkaliphilic bacterium Alkalilimnicola ehrlichii is capable of anaerobic chemolithoautotrophic growth by coupling the oxidation of arsenite (As(III)) to the reduction of nitrate and carbon dioxide. Analysis of its complete genome indicates that it lacks a conventional arsenite oxidase (Aox), but instead possesses two operons that each encode a putative respiratory arsenate reductase (Arr). Here we show that one homolog is expressed under chemolithoautotrophic conditions and exhibits both arsenite oxidase and arsenate reductase activity. We also demonstrate that Arr from two arsenate respiring bacteria, Alkaliphilus oremlandii and Shewanella sp. strain ANA-3, is also biochemically reversible. Thus Arr can function as a reductase or oxidase. Its physiological role in a specific organism, however, may depend on the electron potentials of the molybdenum center and [Fe–S] clusters, additional subunits, or constitution of the electron transfer chain. This versatility further underscores the ubiquity and antiquity of microbial arsenic metabolism.

  1. SO2907, A Putative TonB-dependent Receptor, Is Involved in Dissimilatory Iron Reduction by Shewanella oneidensis Strain MR-1

    Energy Technology Data Exchange (ETDEWEB)

    Qian, Yufeng; Shi, Liang; Tien, Ming

    2011-09-30

    Shewanella oneidensis strain MR-1 utilizes soluble and insoluble ferric ions as terminal electron acceptors during anaerobic respiration. The components of respiratory metabolism are localized in the membrane fractions which include the outer membrane and cytoplasmic membrane. Many of the biological components that interact with the various iron forms are proposed to be localized in these membrane fractions. To identify the iron-binding proteins acting either as an iron transporter or as a terminal iron reductase, we used metal-catalyzed oxidation reactions. This system catalyzed the oxidation of amino acids in close proximity to the iron binding site. The carbonyl groups formed from this oxidation can then be labeled with fluoresceinamine (FLNH2). The peptide harboring the FLNH2 can then be proteolytically digested, purified by HPLC and then identified by MALDI-TOF tandem MS. A predominant peptide was identified to be part of SO2907 that encodes a putative TonB-dependent receptor. Compared to wild type (wt), the so2097 gene deletion (ΔSO2907) mutant has impaired ability to reduce soluble Fe(III), but retains the same ability to respire oxygen or fumarate as the wt. The ΔSO2907 mutant was also impacted in reduction of insoluble iron. Iron binding assays using isothermal titration calorimetry and fluorescence tryptophan quenching demonstrated that a truncated form of heterologous-expressed SO2907 that contains the Fe(III) binding site, is capable of binding soluble Fe(III) forms with Kd of approximate 50 μM. To the best of our knowledge, this is the first report of the physiological role of SO2907 in Fe(III) reduction by MR-1.

  2. Altering petrology through microbial dissimilatory phosphite oxidation

    Science.gov (United States)

    Zhu, H.; Figueroa, I.; Coates, J. D.

    2013-12-01

    Microbial enhanced oil recovery (MEOR) takes advantage of various microbial metabolisms to increase hydrocarbon and energy yield by improving oil flow and flood water sweep in a reservoir during tertiary recovery. Wormholing at the injection well is believed to be the result of the large drop in pressure when water exits the injection well and enters the unconsolidated reservoir matrix. One possible means of prevent this event is to consolidate the rock matrix immediately around the injection well to create a permeable zone of stable petrology. Many microbial processes are known to result in the precipitation of ionic components into their environment creating solid-phase minerals. Such processes could be judiciously applied to bind unconsolidated matrices in order to form a permeable concreted rock matrix, which would minimize wormholing events and thus improve floodwater sweep. However, to date, apart from the application of urea oxidation creating calcium carbonate precipitation, there has been little investigation of the applicability of these precipitated bioconcretions to MEOR strategies and none to control wormholing events. Here we present a novel approach to altering rock petrology to concrete unconsolidated matrices in the near well environment by the biogenesis of authigenic minerals through microbial dissimilatory phosphite oxidation. Desulfotignum phosphitoxidans, strain FiPS-3 is currently the only isolated organism capable of using phosphite (HPO32-) as an electron donor for growth. This process, known as dissimilatory phosphite oxidation (DPO), can be coupled to either sulfate reduction or homoacetogenesis and leads to the accumulation of inorganic phosphate in the medium. The resulting insoluble mineral phases can coat the rock environment resulting in a concretion binding the unconsolidated matrix particles into a single phase. In this study we demonstrate that DPO can effectively produce calcium or magnesium phosphate minerals in packed glass

  3. Highly-defective nanocrystals of ZnS formed via dissimilatory bacterial sulfate reduction: A comparative study with their abiogenic analogues

    Science.gov (United States)

    Xu, Jie; Murayama, Mitsuhiro; Roco, Charles M.; Veeramani, Harish; Michel, F. Marc; Rimstidt, J. Donald; Winkler, Christopher; Hochella, Michael F.

    2016-05-01

    The physicochemical properties of a (nano)mineral are strongly affected by its formation processes, and thus, may indicate the (nano)mineral's formation environment and mechanism. This correlation, although relevant to a myriad of geological, environmental, and material-science processes, has not yet been fully appreciated and systematically explored. Here, using the Zn-S system, we demonstrate that biological and abiotic processes at similar experimental conditions can produce distinctive particle size, morphology, and crystal structure in the formed ZnS. Specifically, bacterial sulfate reduction led to the formation of highly-defective nanocrystals of mixed sphalerite and wurtzite in a range of ∼4-12 nm. By comparison, the abiotic procedures of titration- or diffusion-controlled precipitation resulted in the formation of polycrystalline aggregates that contained randomly-oriented, ultrafine crystals below ∼2-3 nm. The poor crystallinity in the abiogenic samples, regardless of the sulfide addition rates, reveals an overall nucleation-dominated, crystal growth-restricted pathway for the formation of ZnS from low-temperature aqueous solutions. The difficulty in the ZnS crystallization likely stems from the intrinsic surface instability of the ZnS growth units (i.e., in the form of nanoclusters) resulting from the dipole-dipole interactions of the unit with surrounding water molecules. In the biogenic samples, the ZnS crystallinity was significantly improved, indicating that the presence of bacterial metabolites somehow promoted the crystallization process. With evidence for the enlarged {1 1 1} planes in the biogenic nanocrystals, we attribute this enhancement mainly to the selective interaction of the bacterial metabolites with polar faces of the ZnS growth units, which might have effectively screened the dipole moments in the growth units and enabled their crystallographic assembly. By revealing the intrinsic difficulty and specific pathways for the Zn

  4. Properties of the arsenate reductase of plasmid R773.

    Science.gov (United States)

    Gladysheva, T B; Oden, K L; Rosen, B P

    1994-06-14

    Resistance to toxic oxyanions in Escherichia coli is conferred by the ars operon carried on plasmid R773. The gene products of this operon catalyze extrusion of antimonials and arsenicals from cells of E. coli, thus providing resistance to those toxic oxyanions. In addition, resistance to arsenate is conferred by the product of the arsC gene. In this report, purified ArsC protein was shown to catalyze reduction of arsenate to arsenite. The enzymatic activity of the ArsC protein required glutaredoxin as a source of reducing equivalents. Other reductants, including glutathione and thioredoxin, were not effective electron donors. A spectrophotometric assay was devised in which arsenate reduction was coupled to NADPH oxidation. The results obtained with the coupled assay corresponded to those found by direct reduction of radioactive arsenate to arsenite. The only substrate of the reaction was arsenate (Km = 8 mM); other oxyanions including phosphate, sulfate, and antimonate were not reduced. Phosphate and sulfate were weak inhibitors, while the product, arsenite, was a stronger inhibitor (Ki = 0.1 mM). Arsenate reductase activity exhibited a pH optimum of 6.3-6.8. These results indicate that the ArsC protein is a novel reductase, and elucidation of its enzymatic mechanism should be of interest.

  5. Biochemistry of Dissimilatory Sulfur Oxidation

    Energy Technology Data Exchange (ETDEWEB)

    Blake II, R.

    2003-05-30

    The long term goals of this research were to define the substrate oxidation pathways, the electron transport mechanisms, and the modes of energy conservation employed during the dissimilatory oxidation of sulfur practiced by various species of the thiobacilli. Specific adhesion of the thiobacilli to elemental sulfur was studied by electrical impedance, dynamic light scattering, laser Doppler velocimetry, and optical trapping methods. The conclusion is that the thiobacilli appear to express specific receptors that enable the bacteria to recognize and adhere to insoluble sulfur. The enzyme tetrathionate oxidase was purified from two species of the thiobacilli. Extensive structural and functional studies were conducted on adenosine 5'-phosphosulfate reductase purified from cell-free extracts of Thiobacillus denitrificans. The kinetic mechanism of rhodanese was studied.

  6. Structural characterization and vibrational spectroscopy of the arsenate mineral wendwilsonite.

    Science.gov (United States)

    Frost, Ray L; Scholz, Ricardo; López, Andrés; Belotti, Fernanda Maria; Xi, Yunfei

    2014-01-24

    In this paper, we have investigated on the natural wendwilsonite mineral with the formulae Ca2(Mg,Co)(AsO4)2⋅2(H2O). Raman spectroscopy complimented with infrared spectroscopy has been used to determine the molecular structure of the wendwilsonite arsenate mineral. A comparison is made with the roselite mineral group with formula Ca2B(AsO4)2⋅2H2O (where B may be Co, Fe(2+), Mg, Mn, Ni, Zn). The Raman spectra of the arsenate related to tetrahedral arsenate clusters with stretching region shows strong differences between that of wendwilsonite and the roselite arsenate minerals which is attributed to the cation substitution for calcium in the structure. The Raman arsenate (AsO4)(3-) stretching region shows strong differences between that of wendwilsonite and the roselite arsenate minerals which is attributed to the cation substitution for calcium in the structure. In the infrared spectra complexity exists of multiple to tetrahedral (AsO4)(3-) clusters with antisymmetric stretching vibrations observed indicating a reduction of the tetrahedral symmetry. This loss of degeneracy is also reflected in the bending modes. Strong Raman bands around 450 cm(-1) are assigned to ν4 bending modes. Multiple bands in the 350-300 cm(-1) region assigned to ν2 bending modes provide evidence of symmetry reduction of the arsenate anion. Three broad bands for wendwilsonite found at 3332, 3119 and 3001 cm(-1) are assigned to OH stretching bands. By using a Libowitzky empirical equation, hydrogen bond distances of 2.65 and 2.75Å are estimated. Vibrational spectra enable the molecular structure of the wendwilsonite mineral to be determined and whilst similarities exist in the spectral patterns with the roselite mineral group, sufficient differences exist to be able to determine the identification of the minerals. Copyright © 2013 Elsevier B.V. All rights reserved.

  7. Two Lactococcus lactis thioredoxin paralogues play different roles in responses to arsenate and oxidative stress

    DEFF Research Database (Denmark)

    Efler, Petr; Kilstrup, Mogens; Johnsen, Stig

    2015-01-01

    Thioredoxin (Trx) maintains intracellular thiol groups in a reduced state and is involved in a wide range of cellular processes, including ribonucleotide reduction, sulphur assimilation, oxidative stress responses and arsenate detoxification. The industrially important lactic acid bacterium...

  8. Physiological response of Desulfurispirillum indicum S5 to arsenate and nitrate as terminal electron acceptors.

    Science.gov (United States)

    Rauschenbach, Ines; Bini, Elisabetta; Häggblom, Max M; Yee, Nathan

    2012-07-01

    The ability of anaerobic prokaryotes to employ different terminal electron acceptors for respiration enables these organisms to flourish in subsurface ecosystems. Desulfurispirillum indicum strain S5 is an obligate anaerobic bacterium that is able to grow by respiring a range of different electron acceptors, including arsenate and nitrate. Here, we examined the growth, electron acceptor utilization, and gene expression of D. indicum growing under arsenate and nitrate-reducing conditions. Consistent with thermodynamic predictions, the experimental results showed that the reduction of nitrate to ammonium yielded higher cell densities than the reduction of arsenate to arsenite. However, D. indicum grew considerably faster by respiration on arsenate compared with nitrate, with doubling times of 4.3 ± 0.2 h and 19.2 ± 2.0 h, respectively. Desulfurispirillum indicum growing on both electron acceptors exhibited the preferential utilization of arsenate before nitrate. The expression of the arsenate reductase gene arrA was up-regulated approximately 100-fold during arsenate reduction, as determined by qRT-PCR. Conversely, the nitrate reductase genes narG and napA were not differentially regulated under the conditions tested. The results of this study suggest that physiology, rather than thermodynamics, controls the growth rates and hierarchy of electron acceptor utilization in D. indicum.

  9. The use of superporous p(3-acrylamidopropyl)trimethyl ammonium chloride cryogels for removal of toxic arsenate anions.

    Science.gov (United States)

    Sahiner, Nurettin; Demirci, Sahin; Sahiner, Mehtap; Yilmaz, Selahattin; Al-Lohedan, Hamad

    2015-04-01

    Poly((3-Acrylamidopropyl)trimethylammonium chloride) (p(APTMACl)) cryogels were used as a superporous polymer network for the removal of toxic arsenate anions from an aqueous medium. The fast swelling in water, in about 7 s, was shown to be very useful leading to fast arsenate adsorption by p(APTMACl) cryogels within 30 min in comparison to 12 h for bulk common p(APTMACl) hydrogels. A maximum adsorption capacity of about 120 (mg/g) arsenate was obtained for p(APTMACl) cryogels. Both the Langmuir and Freundlich adsorption isotherms were applied for adsorption of arsenate anions by p(APTMACl) cryogels, and it was observed that the adsorption of arsenate anions by p(APTMACl) cryogels are represented better via Langmuir adsorption isotherm providing the R(2) value of 0.998. Furthermore, mag-p(APTMACl) cryogels were synthesized, and shown to be very useful in the fast removal of toxic arsenate anions. The mag-p(APTMACl) cryogels including the adsorbed arsenate were removed by an externally applied magnetic field, with some reduction in the arsenate ion adsorption capacity. It was also further demonstrated that p(APTMACl) cryogels can be reused in the adsorption of arsenate 5 times from aqueous environments without significant loss of adsorption capacity, from 113.47 ± 9 to 102.67 ± 6 mg/g.

  10. Prokaryotic arsenate reductase enhances arsenate resistance in Mammalian cells.

    Science.gov (United States)

    Wu, Dan; Tao, Xuanyu; Wu, Gaofeng; Li, Xiangkai; Liu, Pu

    2014-01-01

    Arsenic is a well-known heavy metal toxicant in the environment. Bioremediation of heavy metals has been proposed as a low-cost and eco-friendly method. This article described some of recent patents on transgenic plants with enhanced heavy metal resistance. Further, to test whether genetic modification of mammalian cells could render higher arsenic resistance, a prokaryotic arsenic reductase gene arsC was transfected into human liver cancer cell HepG2. In the stably transfected cells, the expression level of arsC gene was determined by quantitative real-time PCR. Results showed that arsC was expressed in HepG2 cells and the expression was upregulated by 3 folds upon arsenate induction. To further test whether arsC has function in HepG2 cells, the viability of HepG2-pCI-ArsC cells exposed to arsenite or arsenate was compared to that of HepG2-pCI cells without arsC gene. The results indicated that arsC increased the viability of HepG2 cells by 25% in arsenate, but not in arsenite. And the test of reducing ability of stably transfected cells revealed that the concentration of accumulated trivalent arsenic increased by 25% in HepG2-pCI-ArsC cells. To determine the intracellular localization of ArsC, a fusion vector with fluorescent marker pEGFP-N1-ArsC was constructed and transfected into.HepG2. Laser confocal microscopy showed that EGFP-ArsC fusion protein was distributed throughout the cells. Taken together, these results demonstrated that prokaryotic arsenic resistant gene arsC integrated successfully into HepG2 genome and enhanced arsenate resistance of HepG2, which brought new insights of arsenic detoxification in mammalian cells.

  11. Arsenate tolerance in Silene paradoxa does not rely on phytochelatin-dependent sequestration.

    Science.gov (United States)

    Arnetoli, Miluscia; Vooijs, Riet; ten Bookum, Wilma; Galardi, Francesca; Gonnelli, Cristina; Gabbrielli, Roberto; Schat, Henk; Verkleij, Jos A C

    2008-04-01

    Arsenate tolerance, As accumulation and As-induced phytochelatin accumulation were compared in populations of Silene paradoxa, one from a mine site enriched in As, Cu and Zn, the other from an uncontaminated site. The mine population was significantly more arsenate-tolerant. Arsenate uptake and root-to-shoot transport were slightly but significantly higher in the non-mine plants. The difference in uptake was quantitatively insufficient to explain the difference in tolerance between the populations. As accumulation in the roots was similar in both populations, but the mine plants accumulated much less phytochelatins than the non-mine plants. The mean phytochelatin chain length, however, was higher in the mine population, possibly due to a constitutively lower cellular glutathione level. It is argued that the mine plants must possess an arsenic detoxification mechanism other than arsenate reduction and subsequent phytochelatin-based sequestration. This alternative mechanism might explain at least some part of the superior tolerance in the mine plants.

  12. U(VI) Uptake and Reduction by Fe(II)-Bearing Secondary Mineralization Products of the Bioreduction of Fe(III) Oxides by Dissimilatory Fe(III)-Reducing Bacteria

    Science.gov (United States)

    O'Loughlin, E. J.; Kelly, S. D.; Kemner, K. M.

    2008-12-01

    Biogenic Fe(II) phases (magnetite, green rust, siderite, vivianite, etc.) provide a reservoir of reducing capacity in the subsurface that may contribute to the reduction of contaminants such as U(VI). In this study we examined the potential for the uptake and reduction of U(VI) in the presence of biogenic green rust, (BioGR) biogenic magnetite (BioMAG), and biogenic siderite (BioSID) resulting from the reduction of Fe(III) oxides by Shewanella putrefaciens CN32. Suspensions of biogenic Fe(II) phases were pasteurized (70 °C for 1 h) to eliminate the potential for microbial reduction of U(VI) and washed repeatedly to remove any soluble reductants. The suspensions were then spiked with uranyl chloride solution. Within 48 h, the total solution-phase U(VI) concentrations decreased from 500 μM to 1.5 μM in the U-BioGR system, to 392 μM in the U-BioMAG system, and to 472 μM in the U-BioSID system, as determined by ICP- OES. Analysis of the samples by U LIII extended X-ray absorption fine structure spectroscopy (EXAFS) indicated that despite a stoichiometric excess of Fe(II), no more than 6% of U(VI) was reduced in the U- BioSID system, and no more than 22% of U(VI) was reduced in the U-BioMAG system. For comparison, in the U-BioGR system, no less than 80% of U(VI) was reduced to U(IV). Uptake of U(VI) by BioGR and BioMAG was accompanied by the formation of nanoparticulate uraninite. The U EXAFS data from the U-BioSID system was consistent with partial U(VI)/U(IV) substitution for Fe(II) in the surface layer of siderite particles and adsorption of U(IV). Our results clearly demonstrate that there are significant differences in reactivity among biogenic Fe(II) phases with respect to the uptake and reduction of U(VI).

  13. Arsenate uncoupling of oxidative phosphorylation in isolated plant mitochondria

    Energy Technology Data Exchange (ETDEWEB)

    Wickes, W.A.; Wiskich, J.T.

    1976-01-01

    The uncoupling by arsenate of beetroot and cauliflower bud mitochondria showed the following characteristics: arsenate stimulation of respiration above the rate found with phosphate; inhibition of arsenate-stimulated respiration by phosphate; enhancement of arsenate-stimulated respiration by ADP; only partial prevention of this ADP-enhanced respiration by atractyloside; inhibition by oligomycin of the arsenate-stimulated respiration back to the phosphate rate; and the absence of any stimulatory effect of ADP in the presence of oligomycin. These results are qualitatively analogous to those reported for arsenate uncoupling in rat liver mitochondria. Arsenate stimulated malate oxidation, presumably by stimulating malate entry, in both beetroot and cauliflower bud mitochondria; however, high rates of oxidation, and presumably entry, were only sustained with arsenate in beetroot mitochondria. NADH was oxidized rapidly in cauliflower bud mitochondria in the presence of arsenate, showing that arsenate did not inhibit electron transfer processes.

  14. Biotransformation of the pesticide sodium arsenate.

    Science.gov (United States)

    Shariatpanahi, M; Anderson, A C; Abdelghani, A A; Englande, A J; Hughes, J; Wilkinson, R F

    1981-01-01

    Biotransformation is an important parameter in assessing the environmental impact and fate of pesticides since metabolites produced may be either more or less toxic than the parent compound. Sodium arsenate (+5 inorganic), the wood preservative and insecticide, may be converted to both inorganic (+3) and organic compounds (-3) by microorganisms in soil, sediment and water bodies. Biotransformation of sodium arsenate was studied in pure cultures of 5 bacterial species using a mineral salt and limited carbon source medium. Arsenate concentrations were 10 microgram/ml and 100 microgram/ml of arsenic respectively. The rate of biodegradation of the parent compound was described by a first order composite exponential equation of the form Ct = C1e-k1t+C2e-k2t. Rates of production of metabolites (arsenite, monomethylarsine, dimethylarsine and trimethylarsine) were described by a first order exponential equation of the form Ct = Co (1-e-kt).

  15. Arsenate impact on the metabolite profile, production and arsenic loading of xylem sap in cucumbers (Cucumis sativus L.

    Directory of Open Access Journals (Sweden)

    Kalle eUroic

    2012-04-01

    Full Text Available Arsenic uptake and translocation studies on xylem sap focus generally on the concentration and speciation of arsenic in the xylem. Arsenic impact on the xylem sap metabolite profile and its production during short term exposure has not been reported in detail. To investigate this, cucumbers were grown hydroponically and arsenate (AsV and DMA were used for plant treatment for 24 h. Total arsenic and arsenic speciation in xylem sap was analysed including a metabolite profiling under arsenate stress. Produced xylem sap was quantified and absolute arsenic transported was determined. AsV exposure has a significant impact on the metabolite profile of xylem sap. Four m/z values corresponding to four compounds were up regulated, one compound down regulated by arsenate exposure. The compound down regulated was identified to be isoleucine. Furthermore, arsenate has a significant influence on sap production, leading to a reduction of up to 96 % sap production when plants are exposed to 1000 μg kg-1 arsenate. No difference to control plants was observed when plants were exposed to 1000 μg kg-1 DMA. Absolute arsenic amount in xylem sap was the lowest at high arsenate exposure. These results show that AsV has a significant impact on the production and metabolite profile of xylem sap. The physiological importance of isoleucine needs further attention.

  16. Phylogenetic diversity of dissimilatory ferric iron reducers in paddy soil of Hunan, South China

    Energy Technology Data Exchange (ETDEWEB)

    Wang Xin-Jun [State Key Lab. of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, BJ (China); Graduate Univ., Chinese Academy of Sciences, BJ (China); Yang Jing; Chen Xue-Ping; Sun Guo-Xin [State Key Lab. of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, BJ (China); Zhu Yong-Guan [State Key Lab. of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, BJ (China); Key Lab. of Urban Environment and Health, Inst. of Urban Environment, Chinese Academy of Sciences, Xiamen (China)

    2009-12-15

    Purpose: Dissimilatory iron-reducing bacteria have been described by both culture-dependent and -independent methods in various environments, including freshwater, marine sediments, natural wetlands, and contaminated aquifers. However, little is known about iron-reducing microbial communities in paddy soils. The goal of this study was to characterize iron-reducing microbial communities in paddy soil. Moreover, the effect of dissolved and solid-phase iron (III) species on the iron-reducing microbial communities was also investigated by enrichment cultures. Methods: Ferric citrate and ferrihydrite were used respectively to set up enrichment cultures of dissimilatory ironreducing microorganisms using 1% inoculum of soil samples, and the iron reduction was measured. Moreover, bacterial DNA was extracted and 16S rRNA genes were PCR-amplified, and subsequently analyzed by the clone library and terminal restriction fragment length polymorphism (T-RFLP). Results: Phylogenetic analysis of 16S rRNA gene sequences extracted from the enrichment cultures revealed that Bradyrhizobium, Bacteroides, Clostridium and Ralstonia species were the dominant bacteria in the ferric citrate enrichment. However, members of the genera Clostridium, Bacteroides, and Geobacter were the dominant micro-organisms in the ferrihydrite enrichment. Analysis of enrichment cultures by T-RFLP strongly supported the cloning and sequencing results. Conclusions: The present study demonstrated that dissimilatory iron-reducing consortia in As-contaminated paddy soil are phylogenetically diverse. Moreover, iron (III) sources as a key factor have a strong effect on the iron (III)-reducing microbial community structure and relative abundance in the enrichments. In addition, Geobacter species are selectively enriched by ferrihydrite enrichment cultures. (orig.)

  17. Arsenate tolerance in Silene paradoxa does not rely on phytochelatin-dependent sequestration

    Energy Technology Data Exchange (ETDEWEB)

    Arnetoli, Miluscia [Section of Plant Ecology and Physiology, Department of Plant Biology, University of Florence, via Micheli 1, 50121 Firenze (Italy)], E-mail: miluscia@gmail.com; Vooijs, Riet; Bookum, Wilma ten [Institute of Molecular and Cellular Biology, Faculty of Earth and Life Sciences, Vrije Universiteit Amsterdam, De Boelelaan 1085, 1081 HV Amsterdam (Netherlands); Galardi, Francesca; Gonnelli, Cristina; Gabbrielli, Roberto [Section of Plant Ecology and Physiology, Department of Plant Biology, University of Florence, via Micheli 1, 50121 Firenze (Italy); Schat, Henk; Verkleij, Jos A.C. [Institute of Molecular and Cellular Biology, Faculty of Earth and Life Sciences, Vrije Universiteit Amsterdam, De Boelelaan 1085, 1081 HV Amsterdam (Netherlands)

    2008-04-15

    Arsenate tolerance, As accumulation and As-induced phytochelatin accumulation were compared in populations of Silene paradoxa, one from a mine site enriched in As, Cu and Zn, the other from an uncontaminated site. The mine population was significantly more arsenate-tolerant. Arsenate uptake and root-to-shoot transport were slightly but significantly higher in the non-mine plants. The difference in uptake was quantitatively insufficient to explain the difference in tolerance between the populations. As accumulation in the roots was similar in both populations, but the mine plants accumulated much less phytochelatins than the non-mine plants. The mean phytochelatin chain length, however, was higher in the mine population, possibly due to a constitutively lower cellular glutathione level. It is argued that the mine plants must possess an arsenic detoxification mechanism other than arsenate reduction and subsequent phytochelatin-based sequestration. This alternative mechanism might explain at least some part of the superior tolerance in the mine plants. - Neither decreased uptake nor phytochelatins seem to play a role in the As tolerance in Silene paradoxa.

  18. Effect of phosphate, iron and sulfate reduction on arsenic dynamics and bioaccumulation in constructed wetlands

    Science.gov (United States)

    Zhang, Z.; Moon, H. S.; Myneni, S.; Jaffe, P. R.

    2016-12-01

    Constructed wetlands are economically viable and highly efficient in the treatment of high As waters discharged from smelting process in the mining industry. However, arsenic (As) dynamics and bioaccumulation in constructed wetlands coupled to nutrients loading and associated biogeochemical changes are confounding and not well understood. In this study, we investigated the effect of phosphate, iron and sulfate reduction on As dynamics in the wetland rhizosphere and its bioaccumulation in plants using greenhouse mesocosms. Results show that high Fe (50µM ferrihydrite/g soil) and SO42- (5mM) treatments are most favorable for As sequestration in soils in the presence of wetland plants (Scirpus actus), probably because the biodegradable plant exudates released into the rhizosphere facilitates the microbial reduction of Fe(III), SO42- and As(V) to sequester As by precipitation/coprecipitation. Whereas, from the transition of oxidizing to reducing conditions, the loading of high phosphate (100µM) enhances the As release into groundwater and its accumulation in the plants, due to the competitive sorption between phosphate and arsenate as well as the reductive dissolution of Fe and As. As retention in soils and accumulation in plants were mainly controlled by SO42- rather than Fe levels. Compared with low SO42- (0.1mM) treatment, high SO42- resulted in 2 times more As in soils, 30 times more As in roots, and 49% less As in leaves. The As levels in soils are negatively correlated with the As levels in plant roots. An As speciation analysis in pore water indicated that 19% more dissolved As was reduced under high SO42- than low SO42- levels, and 30% more As(III) was detected under high PO43- than low PO43- levels, which is consistent with the fact that more dissimilatory arsenate-respiring bacteria were found under high SO42- and high PO43- levels.

  19. Effect of sodium arsenate on microbial growth in a chemostat.

    Science.gov (United States)

    Shariatpanahi, M; Anderson, A C

    1981-01-01

    Microbial transformation of sodium arsenate, the wood preservative and insecticide, is important in assessing the environmental impact of this pesticide. Recent studies using batch culture techniques have shown that arsenate is metabolized to more toxic end products. This study investigated the effect of the chemical on the microbial cells themselves using continuous flow cultures to examine the effect of arsenate on the growth and maintenance requirements of the microbes. Cell yield was lower and maintenance requirements higher at 100 micrograms/ml arsenate than at 10 micrograms/ml indicating a greater expenditure of energy by the cells to maintain homeostasis.

  20. Arsenate resistant Penicillium coffeae: a potential fungus for soil bioremediation.

    Science.gov (United States)

    Bhargavi, S D; Savitha, J

    2014-03-01

    Bioremediation is an effective method for the treatment of major metal contaminated sites. Fungi were isolated from soil samples collected from different arsenate contaminated areas across India. An isolate, Penicillium coffeae, exhibited resistance to arsenate up to 500 mM. Results indicated that pretreatment of biomass with alkali (NaOH) enhanced the percentage of adsorption to 66.8% as compared to that of live and untreated dead biomass whose adsorption was 22.9% and 60.2% respectively. The physiological parameters evaluated in this study may help pilot studies aimed at bioremediation of arsenate contaminated effluents using arsenate resistant fungus P. coffeae.

  1. Competitive and cooperative adsorption of arsenate and citrate on goethite

    Institute of Scientific and Technical Information of China (English)

    SHI Rong; JIA Yongfeng; WANG Chengzhi

    2009-01-01

    The fate of arsenic in natural environments is influenced by adsorption onto metal (hydr)oxides. The extent of arsenic adsorption is strongly affected by coexisting dissolved natural organic acids. Recently, some studies reported that there existed competitive adsorption between arsenate and citrate on goethite. Humic acid is known to interact strongly with arsenate by forming complexes in aqueous solution, hence it is necessary to undertake a comprehensive study of the adsorption of arsenate/citrate onto goethite in the presence of one another. The results showed that at the arsenate concentrations used in this study (0.006--0.27 mmol/L), citrate decreased arsenate adsorption at acidic pH but no effect was observed at alkaline pH. In comparison, citrate adsorption was inhibited at acidic pH, but enhanced at alkaline pH by arsenate. This was probably due to the formation of complex between arsenate and citrate like the case of arsenate with humic acid. These results implied that the mechanism of the adsorption of arsenate and citrate onto goethite in the presence of one another involved not only competition for binding sites, but the cooperation between the two species at the water-goethite interface as well.

  2. Behavior of Eucalyptus urophylla and Eucalyptus citriodora Seedlings Grown in Soil Contaminated by Arsenate

    Directory of Open Access Journals (Sweden)

    Roseli Freire Melo

    2016-01-01

    Full Text Available ABSTRACT Persistent areas of tailings and deposits from coal and gold mining may present high levels of arsenic (As, mainly in the arsenate form, endangering the environment and human health. The establishment of vegetation cover is a key step to reclaiming these environments. Thus, this study aimed to evaluate the potential of Eucalyptus urophylla and E. citriodora seedlings for use in phytoremediation programs of arsenate-contaminated areas. Soil samples were incubated at increasing rates (0, 50, 100, 200 and 400 mg dm-3 of arsenic (arsenate form, using Na2HAsO4 for 15 days. The seedlings were produced in a substrate (vermiculite + sawdust and were transplanted to the pots with soil three months after seed germination. The values of plant height and diameter were taken during transplanting and 30, 60 and 90 days after transplanting. In the last evaluation, the total leaf area and biomass of shoots and roots were also determined. The values of available As in soil which caused a 50 % dry matter reduction (TS50%, the As translocation index (TI from the roots to the shoot of the plants, and its bioconcentration factor (BF were also calculated. Higher levels of arsenate in the soil significantly reduced the dry matter production of roots and shoots and the height of both species, most notably in E. urophylla plants. The highest levels of As were found in the root, with higher values for E. citriodora (ranging from 253.86 to 400 mg dm-3. The TI and BF were also reduced with As doses, but the values found in E. citriodora were significantly higher than in E. urophylla. E. citriodora plants presented a higher capacity to tolerate As and translocate it to the shoot than E. urophylla. Although these species cannot be considered as hyperaccumulators of As, E. citriodora presented the potential to be used in phytoremediation programs in arsenate-contaminated areas due to the long-term growth period of this species.

  3. The interactive biotic and abiotic processes of DDT transformation under dissimilatory iron-reducing conditions.

    Science.gov (United States)

    Jin, Xin; Wang, Fang; Gu, Chenggang; Yang, Xinglun; Kengara, Fredrick O; Bian, Yongrong; Song, Yang; Jiang, Xin

    2015-11-01

    The objective of the study was to elucidate the biotic and abiotic processes under dissimilatory iron reducing conditions involved in reductive dechlorination and iron reduction. DDT transformation was investigated in cultures of Shewanella putrefaciens 200 with/without α-FeOOH. A modified first-order kinetics model was developed and described DDT transformation well. Both the α-FeOOH reduction rate and the dechlorination rate of DDT were positively correlated to the biomass. Addition of α-FeOOH enhanced reductive dechlorination of DDT by favoring the cell survival and generating Fe(II) which was absorbed on the surface of bacteria and iron oxide. 92% of the absorbed Fe(II) was Na-acetate (1M) extractable. However, α-FeOOH also played a negative role of competing for electrons as reflected by the dechlorination rate of DDT was inhibited when increasing the α-FeOOH from 1 g L(-1) to 5 g L(-1). DDT was measured to be toxic to S. putrefaciens 200. The metabolites DDD, DDE and DDMU were recalcitrant to S. putrefaciens 200. The results suggested that iron oxide was not the key factor to promote the dissipation of DDX (DDT and the metabolites), whereas the one-electron reduction potential (E1) of certain organochlorines is the main factor and that the E1 higher than the threshold of the reductive driving forces of DIRB probably ensures the occur of reductive dechlorination.

  4. Microbial removal of Fe(III) impurities from clay using dissimilatory iron reducers.

    Science.gov (United States)

    Lee, E Y; Cho, K S; Ryu, H W; Chang, Y K

    1999-01-01

    Fe(III) impurities, which detract refractoriness and whiteness from porcelain and pottery, could be biologically removed from low-quality clay by indigenous dissimilatory Fe(III)-reducing microorganisms. Insoluble Fe(III) in clay particles was leached out as soluble Fe(II), and the Fe(III) reduction reaction was coupled to the oxidation of sugars such as glucose, maltose and sucrose. A maximum removal of 44-45% was obtained when the relative amount of sugar was 5% (w/w; sugar/clay). By the microbial treatment, the whiteness of the clay was increased from 63.20 to 79.64, whereas the redness was clearly decreased from 13.47 to 3.55.

  5. The cymA Gene, Encoding a Tetraheme c-Type Cytochrome, Is Required for Arsenate Respiration in Shewanella Species▿

    Science.gov (United States)

    Murphy, Julie N.; Saltikov, Chad W.

    2007-01-01

    In Shewanella sp. strain ANA-3, utilization of arsenate as a terminal electron acceptor is conferred by a two-gene operon, arrAB, which lacks a gene encoding a membrane-anchoring subunit for the soluble ArrAB protein complex. Analysis of the genome sequence of Shewanella putrefaciens strain CN-32 showed that it also contained the same arrAB operon with 100% nucleotide identity. Here, we report that CN-32 respires arsenate and that this metabolism is dependent on arrA and an additional gene encoding a membrane-associated tetraheme c-type cytochrome, cymA. Deletion of cymA in ANA-3 also eliminated growth on and reduction of arsenate. The ΔcymA strains of CN-32 and ANA-3 negatively affected the reduction of Fe(III) and Mn(IV) but not growth on nitrate. Unlike the CN-32 ΔcymA strain, growth on fumarate was absent in the ΔcymA strain of ANA-3. Both homologous and heterologous complementation of cymA in trans restored growth on arsenate in ΔcymA strains of both CN-32 and ANA-3. Transcription patterns of cymA showed that it was induced under anaerobic conditions in the presence of fumarate and arsenate. Nitrate-grown cells exhibited the greatest level of cymA expression in both wild-type strains. Lastly, site-directed mutagenesis of the first Cys to Ser in each of the four CXXCH c-heme binding motifs of the CN-32 CymA nearly eliminated growth on and reduction of arsenate. Together, these results indicate that the biochemical mechanism of arsenate respiration and reduction requires the interactions of ArrAB with a membrane-associated tetraheme cytochrome, which in the non-arsenate-respiring Shewanella species Shewanella oneidensis strain MR-1, has pleiotropic effects on Fe(III), Mn(IV), dimethyl sulfoxide, nitrate, nitrite, and fumarate respiration. PMID:17209025

  6. Functional roles of arcA, etrA, cyclic AMP (cAMP)-cAMP receptor protein, and cya in the arsenate respiration pathway in Shewanella sp. strain ANA-3.

    Science.gov (United States)

    Murphy, Julie N; Durbin, K James; Saltikov, Chad W

    2009-02-01

    Microbial arsenate respiration can enhance arsenic release from arsenic-bearing minerals--a process that can cause arsenic contamination of water. In Shewanella sp. strain ANA-3, the arsenate respiration genes (arrAB) are induced under anaerobic conditions with arsenate and arsenite. Here we report how genes that encode anaerobic regulator (arcA and etrA [fnr homolog]) and carbon catabolite repression (crp and cya) proteins affect arsenate respiration in ANA-3. Transcription of arcA, etrA, and crp in ANA-3 was similar in cells grown on arsenate and cells grown under aerobic conditions. ANA-3 strains lacking arcA and etrA showed minor to moderate growth defects, respectively, with arsenate. However, crp was essential for growth on arsenate. In contrast to the wild-type strain, arrA was not induced in the crp mutant in cultures shifted from aerobic to anaerobic conditions containing arsenate. This indicated that cyclic AMP (cAMP)-cyclic AMP receptor (CRP) activates arr operon transcription. Computation analysis for genome-wide CRP binding motifs identified a putative binding motif within the arr promoter region. This was verified by electrophoretic mobility shift assays with cAMP-CRP and several DNA probes. Lastly, four putative adenylate cyclase (cya) genes were identified in the genome. One particular cya-like gene was differentially expressed under aerobic versus arsenate respiration conditions. Moreover, a double mutant lacking two of the cya-like genes could not grow with arsenate as a terminal electron acceptor; exogenous cAMP could complement growth of the double cya mutant. It is concluded that the components of the carbon catabolite repression system are essential to regulating arsenate respiratory reduction in Shewanella sp. strain ANA-3.

  7. Arsenate reduction and methylation in the cells of Trichoderma asperellum SM-12F1, Penicillium janthinellum SM-12F4, and Fusarium oxysporum CZ-8F1 investigated with X-ray absorption near edge structure

    Energy Technology Data Exchange (ETDEWEB)

    Su, S.M., E-mail: shimingsu@163.com [Institute of Environment and Sustainable Development in Agriculture, Chinese Academy of Agricultural Sciences/Key Laboratory of Agro-Environment, Ministry of Agriculture, Beijing (China); Zeng, X.B., E-mail: zengxb@ieda.org.cn [Institute of Environment and Sustainable Development in Agriculture, Chinese Academy of Agricultural Sciences/Key Laboratory of Agro-Environment, Ministry of Agriculture, Beijing (China); Li, L.F.; Duan, R.; Bai, L.Y. [Institute of Environment and Sustainable Development in Agriculture, Chinese Academy of Agricultural Sciences/Key Laboratory of Agro-Environment, Ministry of Agriculture, Beijing (China); Li, A.G.; Wang, J.; Jiang, S. [Shanghai Synchrotron Radiation Facility, Shanghai Institute of Applied Physics, Chinese Academy of Sciences, Shanghai (China)

    2012-12-15

    Highlights: Black-Right-Pointing-Pointer Three fungal strains are capable of As(V) reduction and methylation. Black-Right-Pointing-Pointer As(V) reduction might be more easily processed than the methylation in fungal cells. Black-Right-Pointing-Pointer As sequestration and speciation transformation might be the detoxification processes. - Abstract: Synchrotron radiation-based X-ray absorption near edge structure (XANES) was introduced to directly analysis chemical species of arsenic (As) in the cells of Trichoderma asperellum SM-12F1, Penicillium janthinellum SM-12F4, and Fusarium oxysporum CZ-8F1 capable of As accumulation and volatilisation. After exposure to As(V) of 500 mg L{sup -1} for 15 days, a total of 60.5% and 65.3% of the accumulated As in the cells of T. asperellum SM-12F1 and P. janthinellum SM-12F4, respectively, was As(III), followed by 31.3% and 32.4% DMA (dimethylarsinic acid), 8.3% and 2.3% MMA (monomethylarsonic acid), respectively. However, for F. oxysporum CZ-8F1, 54.5% of the accumulated As was As(III), followed by 37.8% MMA and 7.7% As(V). The reduction and methylation of As(V) formed As(III), MMA, and DMA as the primacy products, and the reduction of As(V) might be more easily processed than the methylation. These results will help to understanding the mechanisms of As detoxification and its future application in bioremediation.

  8. Arsenite-oxidizing and arsenate-reducing bacteria associated with arsenic-rich groundwater in Taiwan

    Science.gov (United States)

    Liao, Vivian Hsiu-Chuan; Chu, Yu-Ju; Su, Yu-Chen; Hsiao, Sung-Yun; Wei, Chia-Cheng; Liu, Chen-Wuing; Liao, Chung-Min; Shen, Wei-Chiang; Chang, Fi-John

    2011-04-01

    Drinking highly arsenic-contaminated groundwater is a likely cause of blackfoot disease in Taiwan, but microorganisms that potentially control arsenic mobility in the subsurface remain unstudied. The objective of this study was to investigate the relevant arsenite-oxidizing and arsenate-reducing microbial community that exists in highly arsenic-contaminated groundwater in Taiwan. We cultured and identified arsenic-transforming bacteria, analyzed arsenic resistance and transformation, and determined the presence of genetic markers for arsenic transformation. In total, 11 arsenic-transforming bacterial strains with different colony morphologies and varying arsenic transformation abilities were isolated, including 10 facultative anaerobic arsenate-reducing bacteria and one strictly aerobic arsenite-oxidizing bacterium. All of the isolates exhibited high levels of arsenic resistance with minimum inhibitory concentrations of arsenic ranging from 2 to 200 mM. Strain AR-11 was able to rapidly oxidize arsenite to arsenate at concentrations relevant to environmental groundwater samples without the addition of any electron donors or acceptors. We provide evidence that arsenic-reduction activity may be conferred by the ars operon(s) that were not amplified by the designed primers currently in use. The 16S rRNA sequence analysis grouped the isolates into the following genera: Pseudomonas, Bacillus, Psychrobacter, Vibrio, Citrobacter, Enterobacter, and Bosea. Among these genera, we present the first report of the genus Psychrobacter being involved in arsenic reduction. Our results further support the hypothesis that bacteria capable of either oxidizing arsenite or reducing arsenate coexist and are ubiquitous in arsenic-contaminated groundwater.

  9. Arsenate and phosphate adsorption in relation to oxides composition in soils: LCD modeling.

    Science.gov (United States)

    Cui, Yanshan; Weng, Liping

    2013-07-02

    The pH dependent solid-solution distribution of arsenate and phosphate in five Dutch agricultural soil samples was measured in the pH range 4-8, and the results were interpreted using the LCD (ligand and charge distribution) adsorption modeling. The pH dependency is similar for both oxyanions, with a minimum soluble concentration observed around pH 6-8. This pH dependency can be successfully described with the LCD model and it is attributed mainly to the synergistic effects from Ca adsorption. The solubility of phosphate is much lower than that of arsenate. This big difference cannot be sufficiently explained by the reduction of small amount of As(V) into As(III), neither by slow desorption/adsorption. The difference between phosphate and arsenate in their solid-solution distribution becomes larger with the increase of aluminum (hydr)oxides (Al-oxides) contribution to the total amount of metal (Al and Fe) (hydr)oxides. The influence of Al-oxides is much larger than its relative amount extracted from the soils. When Al-oxides account for >40% of the soil oxides, the whole adsorbents behave apparently similarly to that of pure Al-oxides. These results indicated that surface coating and substitution may have modified significantly oxyanion adsorption to Fe-oxides in soils, and how to account for this complexity is a challenge for geochemical modeling.

  10. Ion Chromatographic Estimation of Arsenite and Arsenate at Trace Level

    Directory of Open Access Journals (Sweden)

    Chetan Chavan

    2011-01-01

    Full Text Available Present method shows simple and specific determination of traces of inorganic arsenic in water. This method enables simultaneous determination of arsenite by electrochemical detection and arsenate by suppressed conductivity detection. The applicability of this method was illustrated by determining the inorganic arsenite and arsenate content from bore-well water and river water samples without any special pretreatment. The present method for direct determination of arsenite and arsenate shows good sensitivity, selectivity, precision and accuracy. Detection limits determined using this procedure was found to be 2.0 μg/L for arsenite and 30.0 μg/L for Arsenate. The simplicity, ease of use, low detection limit and low running cost of this method makes it appealing for increasing capability of testing in the lab.

  11. Synergistic interaction of glyceraldehydes-3-phosphate dehydrogenase and ArsJ, a novel organoarsenical efflux permease, confers arsenate resistance.

    Science.gov (United States)

    Chen, Jian; Yoshinaga, Masafumi; Garbinski, Luis D; Rosen, Barry P

    2016-06-01

    Microbial biotransformations are major contributors to the arsenic biogeocycle. In parallel with transformations of inorganic arsenic, organoarsenicals pathways have recently been recognized as important components of global cycling of arsenic. The well-characterized pathway of resistance to arsenate is reduction coupled to arsenite efflux. Here, we describe a new pathway of arsenate resistance involving biosynthesis and extrusion of an unusual pentavalent organoarsenical. A number of arsenic resistance (ars) operons have two genes of unknown function that are linked in these operons. One, gapdh, encodes the glycolytic enzyme glyceraldehyde-3-phosphate dehydrogenase. The other, arsJ, encodes a major facilitator superfamily (MFS) protein. The two genes were cloned from the chromosome of Pseudomonas aeruginosa. When expressed together, but not alone, in Escherichia coli, gapdh and arsJ specifically conferred resistance to arsenate and decreased accumulation of As(V). Everted membrane vesicles from cells expressing arsJ accumulated As(V) in the presence of purified GAPDH, D-glceraldehylde 3-phosphate (G3P) and NAD(+) . GAPDH forms the unstable organoarsenical 1-arseno-3-phosphoglycerate (1As3PGA). We propose that ArsJ is an efflux permease that extrudes 1As3PGA from cells, where it rapidly dissociates into As(V) and 3-phosphoglycerate (3PGA), creating a novel pathway of arsenate resistance.

  12. Facile synthesis of size-tunable gold nanoparticles by pomegranate (Punica granatum) leaf extract: Applications in arsenate sensing

    Energy Technology Data Exchange (ETDEWEB)

    Rao, Ashit; Mahajan, Ketakee; Bankar, Ashok [Institute of Bioinformatics and Biotechnology, University of Pune, Pune 411007 (India); Srikanth, Rapole [Proteomics Laboratory, National Centre for Cell Science, Pune 411007 (India); Kumar, Ameeta Ravi [Institute of Bioinformatics and Biotechnology, University of Pune, Pune 411007 (India); Gosavi, Suresh, E-mail: swg@physics.unipune.ac.in [Department of Physics, University of Pune, Pune 411007 (India); Centre for Sensor Studies, University of Pune, Pune 411007 (India); Zinjarde, Smita, E-mail: smita@unipune.ac.in [Institute of Bioinformatics and Biotechnology, University of Pune, Pune 411007 (India); Centre for Sensor Studies, University of Pune, Pune 411007 (India)

    2013-03-15

    Highlights: ► Pomegranate leaf extracts mediated rapid gold nanoparticle (AuNP) synthesis. ► The phyto-inspired AuNPs were size-tuned and characterized. ► The reducing and capping agents in the extract were identified. ► The nanoparticles reacted specifically with arsenate (V) ions. - Abstract: When pomegranate leaf extracts were incubated with chloroauric acid (HAuCl{sub 4}), gold nanoparticles (AuNPs) were synthesized. These were characterized by a variety of techniques. With an increasing content of the leaf extract, a gradual decrease in size and an increase in monodispersity were observed. Transmission electron microscope (TEM) images showed that the phyto-fabricated AuNPs were surrounded by an amorphous layer. Gallic acid in the extract mediated the reduction and a natural decapeptide capped the nanostructures. Blocking of thiol groups in the decapeptide cysteine residues caused the nanoparticles to aggregate. On interaction with arsenate (V) ions, the UV–vis spectra of the nanoparticles showed a decrease in intensity and a red-shift. Energy dispersive spectra confirmed the presence of arsenate associated with the AuNPs. Thus, by using these AuNPs, a method for sensing the toxic arsenate ions could be developed.

  13. Arsenate and phosphate interaction in Saccharomyces cerevisiae

    Institute of Scientific and Technical Information of China (English)

    GENG Chun-nu; ZHU Yong-guan

    2006-01-01

    In the present study, arsenate(As(Ⅴ)) and phosphate(P(Ⅴ)) interactions were investigated in growth, uptake and RNA content in yeast(Saccharomyces cerevisiae). Yeast grew slowly with As(Ⅴ) concentrations increasing in the medium. However, the maximal population density was almost the same among different As(Ⅴ) treatments. It was in the late log phase that yeast growth was augmented by low As(Ⅴ), which was maybe due to the fact that methionine metabolism was stressed by vitamin B6 deprivation, so As(Ⅴ)treatments did not affect maximal population density. However, with P (Ⅴ) concentrations increasing, the maximal population density increased. Therefore, the maximal population density was determined by P (Ⅴ) concentrations in the medium but not by As (Ⅴ)concentrations in the medium. Ycf1p(a tonoplast transpor) transports As(GS)3 into the vacuole, but arsenic(As) remaining in the thalli was 1.27% with As(Ⅴ) exposure for 60 h, from which it can be speculated that the percentage of As transported into vacuole should be lower than 1.27%. However, the percentage of As pumped out of cell was 71.49% with As (Ⅴ) exposure for 68 h. Although two pathways (extrusion and sequestration) were involved in As detoxification in yeast, the extrusion pathway played a major role in As detoxification. RNA content was the highest in the early-log phase and was reduced by As(Ⅴ).

  14. Quantification of dissimilatory (bi)sulphite reductase gene expression in Desulfobacterium autotrophicum using real-time RT-PCR

    DEFF Research Database (Denmark)

    Neretin, LN; Schippers, A.; Pernthaler, A.

    2003-01-01

    We developed a real-time RT-PCR method for the quantification of dissimilatory (bi)sulphite reductase (DSR) mRNA in Desulfobacterium autotrophicum cells. The amount of DSR mRNA was determined relative to the amount of 16S rRNA at different growth conditions during transition from exponential...... changed significantly during growth (up to 310-fold from the early to the late exponential phase during respiration with thiosulphate). The maximum DSR mRNA per-cell contents correlated with cell-specific sulphate reduction rates for all experiments. Environmental applications for the quantification...... to stationary phase: sulphate respiration with lactate, thiosulphate respiration with lactate, sulphate respiration with H-2 and pyruvate fermentation. The dsr gene was expressed constitutively, although DSR mRNA content per-cell varied under different growth conditions. The maximum DSR mRNA per-cell content...

  15. Toxicity and bioaccumulation kinetics of arsenate in two freshwater green algae under different phosphate regimes.

    Science.gov (United States)

    Wang, Ning-Xin; Li, Yan; Deng, Xi-Hai; Miao, Ai-Jun; Ji, Rong; Yang, Liu-Yan

    2013-05-01

    In the present study, the toxicity and bioaccumulation kinetics of arsenate in two green algae Chlamydomonas reinhardtii and Scenedesmus obliquus under phosphate-enriched (+P) and limited (-P) conditions were investigated. P-limitation was found to aggravate arsenate toxicity and S. obliquus was more tolerant than C. reinhardtii. Such phosphate-condition-dependent or algal-species-specific toxicity difference was narrowed when the relative inhibition of cell growth was plotted against intracellular arsenate content instead of its extracellular concentration. The discrepance was further reduced when the intracellular ratio of arsenic to phosphorus was applied. It suggests that both arsenate bioaccumulation and intracellular phosphorus played an important role in arsenate toxicity. On the other hand, arsenate uptake was induced by P-limitation and its variation with ambient arsenate concentration could be well fitted to the Michaelis-Menten model. Arsenate transporters of S. obliquus were found to have a higher affinity but lower capacity than those of C. reinhardtii, which explains its better regulation of arsenate accumulation than the latter species in the toxicity experiment. Further, arsenate depuration was facilitated and more was transformed to arsenite in C. reinhardtii or under -P condition. Intracellular proportion of arsenite was also increased after the algae were transferred from the long-term uptake media to a relatively clean solution in the efflux experiment. Both phenomena imply that algae especially the sensitive species could make physiological adjustments to alleviate the adverse effects of arsenate. Overall, our findings will facilitate the application of algae in arsenate remediation.

  16. Dielectric and structural properties of ferroelectric betaine arsenate films

    Science.gov (United States)

    Balashova, E. V.; Krichevtsov, B. B.; Zaitseva, N. V.; Yurko, E. I.; Svinarev, F. B.

    2014-12-01

    Ferroelectric films of betaine arsenate and partially deuterated betaine arsenate have been grown by evaporation on LiNbO3, α-Al2O3, and NdGaO3 substrates with a preliminarily deposited structure of interdigitated electrodes, as well as on the Al/glass substrate. This paper presents the results of the examination of the block structure of the films in a polarizing microscope, the X-ray diffraction analysis of their crystal structure, and the investigation of the dielectric properties in a measuring field oriented both parallel and perpendicular to the plane of the film. The transition of the films to the ferroelectric state at T = T c is accompanied by anomalies of the capacitance of the structure, an increase in the dielectric loss, and the appearance of dielectric hysteresis loops. The growth of the films from a solution of betaine arsenate in a heavy water leads to an increase in the ferroelectric transition temperature from T c = 119 K in the films without deuterium to T c = 149 K, which corresponds to the degree of deuteration of approximately 60-70%. The dielectric and structural properties of the films are compared with those of the betaine arsenate single crystals and the previously studied films of betaine phosphite and glycine phosphite.

  17. Rice–arsenate interactions in hydroponics: whole genome transcriptional analysis

    Science.gov (United States)

    Norton, Gareth J.; Lou-Hing, Daniel E.; Meharg, Andrew A.; Price, Adam H.

    2008-01-01

    Rice (Oryza sativa) varieties that are arsenate-tolerant (Bala) and -sensitive (Azucena) were used to conduct a transcriptome analysis of the response of rice seedlings to sodium arsenate (AsV) in hydroponic solution. RNA extracted from the roots of three replicate experiments of plants grown for 1 week in phosphate-free nutrient with or without 13.3 μM AsV was used to challenge the Affymetrix (52K) GeneChip Rice Genome array. A total of 576 probe sets were significantly up-regulated at least 2-fold in both varieties, whereas 622 were down-regulated. Ontological classification is presented. As expected, a large number of transcription factors, stress proteins, and transporters demonstrated differential expression. Striking is the lack of response of classic oxidative stress-responsive genes or phytochelatin synthases/synthatases. However, the large number of responses from genes involved in glutathione synthesis, metabolism, and transport suggests that glutathione conjugation and arsenate methylation may be important biochemical responses to arsenate challenge. In this report, no attempt is made to dissect differences in the response of the tolerant and sensitive variety, but analysis in a companion article will link gene expression to the known tolerance loci available in the Bala×Azucena mapping population. PMID:18453530

  18. Rice-arsenate interactions in hydroponics: whole genome transcriptional analysis.

    Science.gov (United States)

    Norton, Gareth J; Lou-Hing, Daniel E; Meharg, Andrew A; Price, Adam H

    2008-01-01

    Rice (Oryza sativa) varieties that are arsenate-tolerant (Bala) and -sensitive (Azucena) were used to conduct a transcriptome analysis of the response of rice seedlings to sodium arsenate (AsV) in hydroponic solution. RNA extracted from the roots of three replicate experiments of plants grown for 1 week in phosphate-free nutrient with or without 13.3 muM AsV was used to challenge the Affymetrix (52K) GeneChip Rice Genome array. A total of 576 probe sets were significantly up-regulated at least 2-fold in both varieties, whereas 622 were down-regulated. Ontological classification is presented. As expected, a large number of transcription factors, stress proteins, and transporters demonstrated differential expression. Striking is the lack of response of classic oxidative stress-responsive genes or phytochelatin synthases/synthatases. However, the large number of responses from genes involved in glutathione synthesis, metabolism, and transport suggests that glutathione conjugation and arsenate methylation may be important biochemical responses to arsenate challenge. In this report, no attempt is made to dissect differences in the response of the tolerant and sensitive variety, but analysis in a companion article will link gene expression to the known tolerance loci available in the BalaxAzucena mapping population.

  19. Sorption and desorption of arsenate and arsenite on calcite

    DEFF Research Database (Denmark)

    Sø, Helle Ugilt; Postma, Diederik Jan; Jakobsen, Rasmus

    2008-01-01

    The adsorption and desorption of arsenate (As(V)) and arsenite (As(111)) oil calcite was investigated in a series of batch experiments in calcite-equilibrated solutions. The solutions covered a broad range of pH, alkalinity, calcium concentration and ionic strength. The initial arsenic...

  20. The anaerobic degradation of organic matter in Danish coastal sediments: iron reduction, manganese reduction, and sulfate reduction

    DEFF Research Database (Denmark)

    Canfield, Donald Eugene; Thamdrup, B; Hansen, Jens Würgler

    1993-01-01

    important than sulfate reduction. Most of the Mn reduction in these sediments may have been coupled to the oxidation of acid volatile sulfides (AVS), rather than to dissimilatory reduction. High rates of metal oxide reduction at all sites were driven by active recycling of both Fe and Mn, encouraged......We used a combination of porewater and solid phase analysis, as well as a series of sediment incubations, to quantify organic carbon oxidation by dissimilatory Fe reduction, Mn reduction, and sulfate reduction, in sediments from the Skagerrak (located off the northeast coast of Jutland, Denmark......). In the deep portion of the basin, surface Mn enrichments reached 3.5 wt%, and Mn reduction was the only important anaerobic carbon oxidation process in the upper 10 cm of the sediment. In the less Mn-rich sediments from intermediate depths in the basin, Fe reduction ranged from somewhat less, to far more...

  1. Arsenate removal from water using sand--red mud columns.

    Science.gov (United States)

    Genç-Fuhrman, Hülya; Bregnhøj, Henrik; McConchie, David

    2005-08-01

    This study describes experiments in which sorption filters, filled with chemically modified red mud (Bauxsol) or activated Bauxsol (AB) coated sand, are used to remove As(V) (arsenate) from water. Bauxsol-coated sand (BCS) and AB-coated sand (ABCS) are prepared by mixing Bauxsol or AB with wet sand and drying. Samples of the BCS and ABCS are also used in batch experiments to obtain isotherm data. The observed adsorption data fit the Langmuir model well, with adsorption maxima of 3.32 and 1.64 mgg(-1) at pH values of 4.5 and 7.1, respectively for BCS; and of 2.14 mgg(-1) for ABCS at a pH of 7.1. Test results show that higher arsenate adsorption capacities can be achieved for both BCS and ABCS when using the columns compared to results for batch experiments; the difference is greater for BCS. Additional batch tests, carried out for 21 days using BCS to explain the observed discrepancy, show that the equilibrium time previously used in batch experiments was too short because adsorption continued for at least 21 days and reached 87% after 21 days compared to only 35% obtained after 4h. Fixed bed column tests, used to investigate the effects of flow rate and initial arsenate concentration indicate that the process is sensitive to both parameters, with lower flow rates (longer effective residence times in the columns) and initial arsenate concentrations providing better column performance. An examination of the combined effect of potential competing anions (i.e. silicate, phosphate, sulphate and bicarbonate) on the column performance showed that the presence of these anions in tap water slightly decreases arsenate removal. Each breakthrough curve is compared to the Thomas model, and it is found that the model may be applied to estimate the arsenate sorption capacity in columns filled with BCS and ABCS. The data obtained from both batch and column studies indicate that BCS and ABCS filtration could be effectively used to remove arsenate from water, with the latter being

  2. Use of drinking water treatment solids for arsenate removal from desalination concentrate.

    Science.gov (United States)

    Xu, Xuesong; Lin, Lu; Papelis, Charalambos; Myint, Maung; Cath, Tzahi Y; Xu, Pei

    2015-05-01

    Desalination of impaired water can be hindered by the limited options for concentrate disposal. Selective removal of specific contaminants using inexpensive adsorbents is an attractive option to address the challenges of concentrate management. In this study, two types of ferric-based drinking water treatment solids (DWTS) were examined for arsenate removal from reverse osmosis concentrate during continuous-flow once-through column experiments. Arsenate sorption was investigated under different operating conditions including pH, arsenate concentration, hydraulic retention time, loading rate, temperature, and moisture content of the DWTS. Arsenate removal by the DWTS was affected primarily by surface complexation, electrostatic interactions, and arsenate speciation. Results indicated that arsenate sorption was highly dependent on initial pH and initial arsenate concentration. Acidic conditions enhanced arsenate sorption as a result of weaker electrostatic repulsion between predominantly monovalent H2AsO4(-) and negatively charged particles in the DWTS. High initial arsenate concentration increased the driving force for arsenate sorption to the DWTS surface. Tests revealed that the potential risks associated with the use of DWTS include the leaching of organic contaminants and ammonia, which can be alleviated by using wet DWTS or discarding the initially treated effluent that contains high organic concentration.

  3. Mineral transformations during the dissolution of uranium ore minerals by dissimilatory metal-reducing bacteria

    Science.gov (United States)

    Glasauer, S.; Weidler, P.; Fakra, S.; Tyliszczak, T.; Shuh, D.

    2011-12-01

    Carnotite minerals [X2(UO2)2(VO4)2]; X = K, Ca, Ba, Mn, Na, Cu or Pb] form the major ore of uranium in the Colorado Plateau. These deposits are highly oxidized and contain U(VI) and V(IV). The biotransformation of U(VI) bound in carnotite by bacteria during dissimilatory metal reduction presents a complex puzzle in mineral chemistry. Both U(VI) and V(V) can be respired by metal reducing bacteria, and the mineral structure can change depending on the associated counterion. We incubated anaerobic cultures of S. putrefaciens CN32 with natural carnotite minerals from southeastern Utah in a nutrient-limited defined medium. Strain CN32 is a gram negative bacterium and a terrestrial isolate from New Mexico. The mineral and metal transformations were compared to a system that contained similar concentrations of soluble U(VI) and V(V). Electron (SEM, TEM) microscopies and x-ray spectromicroscopy (STXM) were used in conjunction with XRD to track mineral changes, and bacterial survival was monitored throughout the incubations. Slow rates of metal reduction over 10 months for the treatment with carnotite minerals revealed distinct biotic and abiotic processes, providing insight on mineral transformation and bacteria-metal interactions. The bacteria existed as small flocs or individual cells attached to the mineral phase, but did not adsorb soluble U or V, and accumulated very little of the biominerals. Reduction of mineral V(V) necessarily led to a dismantling of the carnotite structure. Bioreduction of V(V) by CN32 contributed small but profound changes to the mineral system, resulting in new minerals. Abiotic cation exchange within the carnotite group minerals induced the rearrangement of the mineral structures, leading to further mineral transformation. In contrast, bacteria survival was poor for treatments with soluble U(VI) and V(V), although both metals were reduced completely and formed solid UO2 and VO2; we also detected V(III). For these treatments, the bacteria

  4. Molecular analysis of the distribution and phylogeny of dissimilatory adenosine-5'-phosphosulfate reductase-encoding genes (aprBA) among sulfur-oxidizing prokaryotes.

    Science.gov (United States)

    Meyer, Birte; Kuever, Jan

    2007-10-01

    Dissimilatory adenosine-5'-phosphosulfate (APS) reductase (AprBA) is a key enzyme of the dissimilatory sulfate-reduction pathway. Homologues have been found in photo- and chemotrophic sulfur-oxidizing prokaryotes (SOP), in which they are postulated to operate in the reverse direction, oxidizing sulfite to APS. Newly developed PCR assays allowed the amplification of 92-93 % (2.1-2.3 kb) of the APS reductase locus aprBA. PCR-based screening of 116 taxonomically divergent SOP reference strains revealed a distribution of aprBA restricted to photo- and chemotrophs with strict anaerobic or at least facultative anaerobic lifestyles, including Chlorobiaceae, Chromatiaceae, Thiobacillus, Thiothrix and invertebrate symbionts. In the AprBA-based tree, the SOP diverge into two distantly related phylogenetic lineages, Apr lineages I and II, with the proteins of lineage II (Chlorobiaceae and others) in closer affiliation to the enzymes of the sulfate-reducing prokaryotes (SRP). This clustering is discordant with the dissimilatory sulfite reductase (DsrAB) phylogeny and indicates putative lateral aprBA gene transfer from SRP to the respective SOB lineages. In support of lateral gene transfer (LGT), several beta- and gammaproteobacterial species harbour both aprBA homologues, the DsrAB-congruent 'authentic' and the SRP-related, LGT-derived gene loci, while some relatives possess exclusively the SRP-related apr genes as a possible result of resident gene displacement by the xenologue. The two-gene state might be an intermediate in the replacement of the resident essential gene. Collected genome data demonstrate the correlation between the AprBA tree topology and the composition/arrangement of the apr gene loci (occurrence of qmoABC or aprM genes) from SRP and SOP of lineages I and II. The putative functional role of the SRP-related APS reductases in photo- and chemotrophic SOP is discussed.

  5. The respiratory arsenate reductase from Bacillus selenitireducens strain MLS10

    Science.gov (United States)

    Afkar, E.; Lisak, J.; Saltikov, C.; Basu, P.; Oremland, R.S.; Stolz, J.F.

    2003-01-01

    The respiratory arsenate reductase from the Gram-positive, haloalkaliphile, Bacillus selenitireducens strain MLS10 was purified and characterized. It is a membrane bound heterodimer (150 kDa) composed of two subunits ArrA (110 kDa) and ArrB (34 kDa), with an apparent Km for arsenate of 34 ??M and Vmax of 2.5 ??mol min-1 mg-1. Optimal activity occurred at pH 9.5 and 150 g l-1 of NaCl. Metal analysis (inductively coupled plasma mass spectrometry) of the holoenzyme and sequence analysis of the catalytic subunit (ArrA; the gene for which was cloned and sequenced) indicate it is a member of the DMSO reductase family of molybdoproteins. ?? 2003 Federation of European Microbiological Societies. Published by Elsevier B.V. All rights reserved.

  6. Arsenic fractionation and bioaccessibility in two alkaline Texas soils incubated with sodium arsenate.

    Science.gov (United States)

    Datta, Rupali; Makris, Konstantinos C; Sarkar, Dibyendu

    2007-05-01

    Elevated arsenic (As) concentrations in urban soils with prolonged arsenical pesticide application history have increased the risk associated with accidental hand-to-mouth soil ingestion by children. Earlier work by the authors suggested that the conservative statement of 100% As bioaccessibility in soils was not valid for a set of acidic soils incubated with sodium arsenate. In this study, two alkaline Texas soils incubated with a commonly used As pesticide (sodium arsenate) were evaluated for their potential in reducing soil As bioaccessibility. The objective of this study was to evaluate the effects of incubation time and As load on soil As fractionation and bioaccessibility. Soils were subjected to a sequential As fractionation scheme, and bioaccessible As was quantified using an in vitro stomach phase test. Results showed a reduction in the water-soluble As fraction with incubation time (after 4 months), which remained unchanged after 12 months. This reduction with time was accompanied by an increase in the NaOH- and H(2)SO(4)-extractable As fractions, suggesting As sorption by amorphous Fe/Al hydroxides and/or Ca/Mg compounds, respectively. Organic/sulfides-bound As increased with incubation time after 12 months but not after 4 months of incubation. The aging effect was also observed with the amount of bioaccessible As at all As loads, showing significant positive correlations with the water-extractable and exchangeable As fractions. Bioaccessible As concentrations even after 12 months of incubation were not significantly reduced, suggesting that natural attenuation might prove inadequate to control As bioaccessibility in these alkaline soils.

  7. Slt2 MAPK pathway is essential for cell integrity in the presence of arsenate.

    Science.gov (United States)

    Matia-González, Ana M; Rodríguez-Gabriel, Miguel A

    2011-01-01

    Arsenate is a common toxic metalloid found in drinking water worldwide that causes several human diseases. The biochemical action underlying cellular response to arsenate, however, is not yet completely understood. Here we used Saccharomyces cerevisiae as an eukaryotic model system to identify proteins essential for adaptation to arsenate treatment. Previous studies have demonstrated a function for Hog1 MAPK in modulating the cellular response to arsenite. Our results, however, showed that cells deficient in Hog1 did not show increased sensitivity to arsenate, suggesting that perhaps other MAPKs may be involved in the response to this particular arsenic species. Here, we found that Slt2 MAPK and several of its upstream regulators are essential in modulating the response to arsenate, and that Slt2 is phosphorylated after arsenate treatment. Furthermore, whole-genome transcriptional analysis showed that Slt2 is required for the induction of several genes in response to arsenate exposure. Many of these genes are involved in the cellular response to heat, suggesting an overlap between these two stress response pathways, and pointing toward a common response to both arsenate and heat exposure in Saccharomyces cerevisiae. Furthermore, our results support the idea that cellular exposure to arsenate results in induction of cellular signalling pathways different from those induced under arsenite treatment.

  8. Homology modeling of dissimilatory APS reductases (AprBA of sulfur-oxidizing and sulfate-reducing prokaryotes.

    Directory of Open Access Journals (Sweden)

    Birte Meyer

    Full Text Available BACKGROUND: The dissimilatory adenosine-5'-phosphosulfate (APS reductase (cofactors flavin adenine dinucleotide, FAD, and two [4Fe-4S] centers catalyzes the transformation of APS to sulfite and AMP in sulfate-reducing prokaryotes (SRP; in sulfur-oxidizing bacteria (SOB it has been suggested to operate in the reverse direction. Recently, the three-dimensional structure of the Archaeoglobus fulgidus enzyme has been determined in different catalytically relevant states providing insights into its reaction cycle. METHODOLOGY/PRINCIPAL FINDINGS: Full-length AprBA sequences from 20 phylogenetically distinct SRP and SOB species were used for homology modeling. In general, the average accuracy of the calculated models was sufficiently good to allow a structural and functional comparison between the beta- and alpha-subunit structures (78.8-99.3% and 89.5-96.8% of the AprB and AprA main chain atoms, respectively, had root mean square deviations below 1 A with respect to the template structures. Besides their overall conformity, the SRP- and SOB-derived models revealed the existence of individual adaptations at the electron-transferring AprB protein surface presumably resulting from docking to different electron donor/acceptor proteins. These structural alterations correlated with the protein phylogeny (three major phylogenetic lineages: (1 SRP including LGT-affected Archaeoglobi and SOB of Apr lineage II, (2 crenarchaeal SRP Caldivirga and Pyrobaculum, and (3 SOB of the distinct Apr lineage I and the presence of potential APS reductase-interacting redox complexes. The almost identical protein matrices surrounding both [4Fe-4S] clusters, the FAD cofactor, the active site channel and center within the AprB/A models of SRP and SOB point to a highly similar catalytic process of APS reduction/sulfite oxidation independent of the metabolism type the APS reductase is involved in and the species it has been originated from. CONCLUSIONS: Based on the comparative

  9. Homology modeling of dissimilatory APS reductases (AprBA) of sulfur-oxidizing and sulfate-reducing prokaryotes.

    Science.gov (United States)

    Meyer, Birte; Kuever, Jan

    2008-01-30

    The dissimilatory adenosine-5'-phosphosulfate (APS) reductase (cofactors flavin adenine dinucleotide, FAD, and two [4Fe-4S] centers) catalyzes the transformation of APS to sulfite and AMP in sulfate-reducing prokaryotes (SRP); in sulfur-oxidizing bacteria (SOB) it has been suggested to operate in the reverse direction. Recently, the three-dimensional structure of the Archaeoglobus fulgidus enzyme has been determined in different catalytically relevant states providing insights into its reaction cycle. Full-length AprBA sequences from 20 phylogenetically distinct SRP and SOB species were used for homology modeling. In general, the average accuracy of the calculated models was sufficiently good to allow a structural and functional comparison between the beta- and alpha-subunit structures (78.8-99.3% and 89.5-96.8% of the AprB and AprA main chain atoms, respectively, had root mean square deviations below 1 A with respect to the template structures). Besides their overall conformity, the SRP- and SOB-derived models revealed the existence of individual adaptations at the electron-transferring AprB protein surface presumably resulting from docking to different electron donor/acceptor proteins. These structural alterations correlated with the protein phylogeny (three major phylogenetic lineages: (1) SRP including LGT-affected Archaeoglobi and SOB of Apr lineage II, (2) crenarchaeal SRP Caldivirga and Pyrobaculum, and (3) SOB of the distinct Apr lineage I) and the presence of potential APS reductase-interacting redox complexes. The almost identical protein matrices surrounding both [4Fe-4S] clusters, the FAD cofactor, the active site channel and center within the AprB/A models of SRP and SOB point to a highly similar catalytic process of APS reduction/sulfite oxidation independent of the metabolism type the APS reductase is involved in and the species it has been originated from. Based on the comparative models, there are no significant structural differences between

  10. Functional roles of CymA and NapC in reduction of nitrate and nitrite by Shewanella putrefaciens W3-18-1

    Energy Technology Data Exchange (ETDEWEB)

    Beliav, Alex; Qiu, Dongru; Fredrickson, James K.; Wei, Hehong; Nealson, Kenneth H.; Xia, Ming; Zhou, Jizhong; Dai, Jingcheng; Shi, Liang; Tiedje, James M.; Romine, Margaret F.

    2016-06-01

    Shewanella putrefaciens W3-18-1 harbours two periplasmic nitrate reductase (Nap) gene clusters, NapC-associated nap-alpha (napEDABC) and CymA-dependent nap-beta (napDAGHB), for dissimilatory nitrate respiration. CymA is a member of the NapC/NirT quinol dehydrogenase family and acts as a hub to support different respiratory pathways, including those on iron [Fe(III)] and manganese [Mn(III, IV)] (hydr)oxide, nitrate, nitrite, fumarate and arsenate in Shewanella strains. However, in our analysis it was shown that another NapC/NirT family protein, NapC, was only involved in nitrate reduction, although both CymA and NapC can transfer quinol-derived electrons to a periplasmic terminal reductase or an electron acceptor. Furthermore, our results showed that NapC could only interact specifically with the Nap-alpha nitrate reductase while CymA could interact promiscuously with Nap-alpha, Nap-beta and the NrfA nitrite reductase for nitrate and nitrite reduction. To further explore the difference in specificity, site-directed mutagenesis on both CymA and NapC was conducted and the phenotypic changes in nitrate and nitrite reduction were tested. Our analyses demonstrated that the Lys-91 residue played a key role in nitrate reduction for quinol oxidation and the Asp-166 residue might influence the maturation of CymA. The Asp-97 residue might be one of the key factors that influence the interaction of CymA with the cytochromes NapB and NrfA.

  11. Functional roles of CymA and NapC in reduction of nitrate and nitrite by Shewanella putrefaciens W3-18-1.

    Science.gov (United States)

    Wei, Hehong; Dai, Jingcheng; Xia, Ming; Romine, Margaret F; Shi, Liang; Beliav, Alex; Tiedje, James M; Nealson, Kenneth H; Fredrickson, James K; Zhou, Jizhong; Qiu, Dongru

    2016-06-01

    Shewanella putrefaciens W3-18-1 harbours two periplasmic nitrate reductase (Nap) gene clusters, NapC-associated nap-alpha (napEDABC) and CymA-dependent nap-beta (napDAGHB), for dissimilatory nitrate respiration. CymA is a member of the NapC/NirT quinol dehydrogenase family and acts as a hub to support different respiratory pathways, including those on iron [Fe(III)] and manganese [Mn(III, IV)] (hydr)oxide, nitrate, nitrite, fumarate and arsenate in Shewanella strains. However, in our analysis it was shown that another NapC/NirT family protein, NapC, was only involved in nitrate reduction, although both CymA and NapC can transfer quinol-derived electrons to a periplasmic terminal reductase or an electron acceptor. Furthermore, our results showed that NapC could only interact specifically with the Nap-alpha nitrate reductase while CymA could interact promiscuously with Nap-alpha, Nap-beta and the NrfA nitrite reductase for nitrate and nitrite reduction. To further explore the difference in specificity, site-directed mutagenesis on both CymA and NapC was conducted and the phenotypic changes in nitrate and nitrite reduction were tested. Our analyses demonstrated that the Lys-91 residue played a key role in nitrate reduction for quinol oxidation and the Asp-166 residue might influence the maturation of CymA. The Asp-97 residue might be one of the key factors that influence the interaction of CymA with the cytochromes NapB and NrfA.

  12. Sulfate reduction at low pH in organic wastewaters

    NARCIS (Netherlands)

    Lopes, S.I.C.

    2007-01-01

    The objective of the research described in this thesis was to investigate the operational window of dissimilatory sulfate reduction at low pH (6, 5 and 4) during the acidification of organic wastewaters. High sulfate reduction efficiencies at low pH are desirable for a more sustainable operation of

  13. Nitrogen-limited mangrove ecosystems conserve N through dissimilatory nitrate reduction to ammonium

    Digital Repository Service at National Institute of Oceanography (India)

    Fernandes, S.O.; Bonin, P.C.; Michotey, V.D.; Garcia, N.; LokaBharathi, P.A.

    Earlier observations in mangrove sediments of Goa, India have shown denitrification to be a major pathway for N loss However, percentage of total nitrate transformed through complete denitrification accounted for less than 0�72% of the pore water...

  14. The importance of dissimilatory nitrate reduction to ammonium (DNRA) in the nitrogen cycle of coastal ecosystems

    DEFF Research Database (Denmark)

    Giblin, Anne E.; Tobias, Craig R.; Song, Bongkeun

    2013-01-01

    Until recently, it was believed that biological assimilation and gaseous nitrogen (N) loss through denitrification were the two major fates of nitrate entering or produced within most coastal ecosystems. Denitrification is often viewed as an important ecosystem service that removes reactive N fro...

  15. Anaerobic oxidation of toluene, phenol, and p-cresol by the dissimilatory iron-reducing organism, GS-15

    Science.gov (United States)

    Lovley, D.R.; Lonergan, D.J.

    1990-01-01

    The dissimilatory Fe(III) reducer, GS-15, is the first microorganism known to couple the oxidation of aromatic compounds to the reduction of Fe(III) and the first example of a pure culture of any kind known to anaerobically oxidize an aromatic hydrocarbon, toluene. In this study, the metabolism of toluene, phenol, and p-cresol by GS-15 was investigated in more detail. GS-15 grew in an anaerobic medium with toluene as the sole electron donor and Fe(III) oxide as the electron acceptor. Growth coincided with Fe(III) reduction. [ring-14C]toluene was oxidized to 14CO2, and the stoichiometry of 14CO2 production and Fe(III) reduction indicated that GS-15 completely oxidized toluene to carbon dioxide with Fe(III) as the electron acceptor. Magnetite was the primary iron end product during toluene oxidation. Phenol and p-cresol were also completely oxidized to carbon dioxide with Fe(III) as the sole electron acceptor, and GS-15 could obtain energy to support growth by oxidizing either of these compounds as the sole electron donor. p-Hydroxybenzoate was a transitory extracellular intermediate of phenol and p-cresol metabolism but not of toluene metabolism. GS-15 oxidized potential aromatic intermediates in the oxidation of toluene (benzylalcohol and benzaldehyde) and p-cresol (p-hydroxybenzylalcohol and p-hydroxybenzaldehyde). The metabolism described here provides a model for how aromatic hydrocarbons and phenols may be oxidized with the reduction of Fe(III) in contaminated aquifers and petroleum-containing sediments.

  16. Thiol metabolism and antioxidant systems complement each other during arsenate detoxification in Ceratophyllum demersum L.

    Science.gov (United States)

    Mishra, Seema; Srivastava, Sudhakar; Tripathi, Rudra D; Trivedi, Prabodh K

    2008-01-31

    Ceratophyllum demersum L. is known to be a potential accumulator of arsenic (As), but mechanisms of As detoxification have not been investigated so far. In the present study, we analyzed the biochemical responses of Ceratophyllum plants to arsenate (As(V); 0-250 microM) exposure to explore the underlying mechanisms of As detoxification. Plants efficiently tolerated As toxicity up to concentrations of 50 microM As(V) and durations of 4 d with no significant effect on growth by modulating various pathways in a coordinated and complementary manner and accumulated about 76 microg As g(-1)dw. Significant increases were observed in the levels of various thiols including phytochelatins (PCs), the activities of enzymes of thiolic metabolism as well as arsenate reductase (AR). These primary responses probably enabled plants to detoxify at least some part of As(V) through its reduction and subsequent complexation. The maximum proportion of As chelated by PCs was found to be about 30% (at 50 microM As(V) after 2 d). Simultaneously, a significant increase in the activities of antioxidant enzymes was observed and hence plants did not experience oxidative stress when exposed to 50 microM As(V) for 4 d. Exposure of plants to higher concentrations (250 microM As(V)) and/or for longer durations (7 d) resulted in a significant increase in the level of As (maximum 525 microgg(-1)dw at 250 microM after 7 d) and an inverse relationship between As accumulation and various detoxification strategies was observed that lead to enhanced oxidative stress and hampered growth.

  17. RATES OF HYDROUS FERRIC OXIDE CRYSTALLIZATION AND THE INFLUENCE ON COPRECIPITATED ARSENATE

    Science.gov (United States)

    Arsenate coprecipitated with hydrous ferric oxide (HFO) was stabilized against dissolution during transformation of HFO to more crystalline iron (hydr)oxides. The rate of arsenate stabilization approximately coincided with the rate of HFO transformation at pH 6 and 40 ?C. Compa...

  18. Arsenic Recovery by Stinging Nettle From Lead-Arsenate Contaminated Orchard Soils

    Science.gov (United States)

    Soil contamination with arsenic (As) is common in orchards with a history of lead-arsenate pesticide application. This problem is prevalent in the U.S. Northeast where lead-arsenate foliar sprays were used to control codling moth (Cydia pomonella) in apple orchards. Arsenic is not easily biodegrad...

  19. Ubiquity and diversity of dissimilatory (per)chlorate-reducing bacteria

    Energy Technology Data Exchange (ETDEWEB)

    Coates, J.D.; Michaelidou, U.; Bruce, R.A.; O' Connor, S.M.; Crespi, J.N.; Achenbach, L.A.

    1999-12-01

    Environmental contamination with compounds containing oxyanions of chlorine, such as perchlorate or chlorate [(per)chlorate] or chlorine dioxide, has been a constantly growing problem over the last 100 years. Although the fact that microbes reduce these compounds has been recognized for more than 50 years, only six organisms which can obtain energy for growth by this metabolic process have been described. As part of a study to investigate the diversity and ubiquity of microorganisms involved in the microbial reduction of (per) chlorate, the authors enumerated the (per) chlorate-reducing bacteria (ClRB) in very diverse environments, including pristine and hydrocarbon-contaminated soils, aquatic sediments, paper mill waste sludges, and farm animal waste lagoons. In all of the environments tested, the acetate-oxidizing ClRB represented a significant population, whose size ranged from 2.31 x 10{sup 3} to 2.4 x 10{sup 6} cells per g of sample. In addition, the authors isolated 13 ClRB from these environments. All of these organisms could grow anaerobically by coupling complete oxidation of acetate to reduction of (per) chlorate. Chloride was the sole end product of this reductive metabolism. All of the isolates could also use oxygen as a sole electron acceptor, and most, but not all, could use nitrate. The alternative electron donors included simple volatile fatty acids, such as propionate, butyrate, or valerate, as well as simple organic acids, such as lactate or pyruvate. Oxidized-minus-reduced difference spectra of washed whole-cell suspensions of the isolates had absorbance maxima close to 425, 525, and 550 nm, which are characteristic of type c cytochromes. In addition, washed cell suspensions of all of the ClRB isolates could dismutate chlorite, an intermediate in the reductive metabolism of (per) chlorate, into chloride and molecular oxygen.

  20. Arsenate adsorption mechanisms at the allophane - Water interface

    Science.gov (United States)

    Arai, Y.; Sparks, D.L.; Davis, J.A.

    2005-01-01

    We investigated arsenate (As(V)) reactivity and surface speciation on amorphous aluminosilicate mineral (synthetic allophane) surfaces using batch adsorption experiments, powder X-ray diffraction (XRD), and X-ray absorption spectroscopy (XAS). The adsorption isotherm experiments indicated that As(V) uptake increased with increasing [As(V)]0 from 50 to 1000 ??M (i.e., Langmuir type adsorption isotherm) and that the total As adsorption slightly decreased with increasing NaCl concentrations from 0.01 to 0.1 M. Arsenate adsorption was initially (0-10 h) rapid followed by a slow continuum uptake, and the adsorption processes reached the steady state after 720 h. X-ray absorption spectroscopic analyses suggest that As(V) predominantly forms bidentate binuclear surface species on aluminum octahedral structures, and these species are stable up to 11 months. Solubility calculations and powder XRD analyses indicate no evidence of crystalline AI-As(V) precipitates in the experimental systems. Overall, macroscopic and spectroscopic evidence suggest that the As(V) adsorption mechanisms at the allophane-water interface are attributable to ligand exchange reactions between As(V) and surface-coordinated water molecules and hydroxyl and silicate ions. The research findings imply that dissolved tetrahedral oxyanions (e.g., H2PO42- and H2AsO42-) are readily retained on amorphous aluminosilicate minerals in aquifer and soils at near neutral pH. The innersphere adsorption mechanisms might be important in controlling dissolved arsenate and phosphate in amorphous aluminosilicate-rich low-temperature geochemical environments. ?? 2005 American Chemical Society.

  1. Orientation-switching transition and ferroelectricity in betaine arsenate

    Energy Technology Data Exchange (ETDEWEB)

    Ribeiro, J L; Dekola, T; Vieira, L G, E-mail: jlr@fisica.uminho.p [Centro de Fisica da Universidade do Minho, Campus de Gualtar, 4715-057 Braga (Portugal)

    2009-08-12

    This paper reports a detailed investigation of the low frequency dielectric relaxation of betaine arsenate near the ferroelectric phase transition. The dielectric relaxation data are complemented with polarized infrared reflectivity data taken at low temperatures. The reported results allow us to identify several low frequency modes that clarify the complex behaviour of the dielectric response near the Curie temperature T{sub c2}{approx}120 K. It is suggested that the important slow dynamics observed is linked to the reorientation of the betaine molecular group. The roles of the different molecular units in the structural changes are briefly discussed and a new and more complex phase transition sequence is proposed.

  2. Photoinduced Oxidation of Arsenite to Arsenate on Ferrihydrite

    Energy Technology Data Exchange (ETDEWEB)

    N Bhandari; R Reeder; D Strongin

    2011-12-31

    The photochemistry of an aqueous suspension of the iron oxyhydroxide, ferrihydrite, in the presence of arsenite has been investigated using attenuated total reflection Fourier transform infrared spectroscopy (ATR-FTIR), X-ray absorption near edge structure (XANES), and solution phase analysis. Both ATR-FTIR and XANES show that the exposure of ferrihydrite to arsenite in the dark leads to no change in the As oxidation state, but the exposure of this arsenite-bearing surface, which is in contact with pH 5 water, to light leads to the conversion of the majority of the adsorbed arsenite to the As(V) bearing species, arsenate. Analysis of the solution phase shows that ferrous iron is released into solution during the oxidation of arsenite. The photochemical reaction, however, shows the characteristics of a self-terminating reaction in that there is a significant suppression of this redox chemistry before 10% of the total iron making up the ferrihydrite partitions into solution as ferrous iron. The self-terminating behavior exhibited by this photochemical arsenite/ferrihydrite system is likely due to the passivation of the ferrihydrite surface by the strongly bound arsenate product.

  3. Comparative Proteomic Analysis of Rice Shoots Exposed to High Arsenate

    Institute of Scientific and Technical Information of China (English)

    Yanli Liu; Ming Li; Chao Han; Fengxia Wu; Bingkun Tu; Pingfang Yang

    2013-01-01

    Consumption of arsenic contaminated water and cereals is a serious threat to humans all over the world. Rice (Oryza sativa“Nipponbare”), as a main cereal crop, can accumulate arsenic more than 10-fold that of in other cereals. To gain a comprehensive understanding of the response of rice subjected to 100 mM arsenate stress, a comparative proteomic analysis of rice shoots in combination with morphological and biochemical investigations have been performed in this study. The results demonstrated that arsenate suppressed the growth of rice seedlings, destroyed the cellular ultra-structure and changed the homeostasis of reactive oxygen species. Moreover, a total of 38 differentially displayed proteins, which were mainly involved in metabolism, redox and protein-metabolism, were identified. The data suggest the arsenic can inhibit rice growth through negatively affecting chloroplast structure and photosynthesis. In addition, upregulation of the proteins involved in redox and protein metabolism might help the rice to be resistant or tolerant to arsenic toxicity. In general, this study improves our understanding about the rice arsenic responsive mechanism.

  4. Evaluation of ferrolysis in arsenate adsorption on the paddy soil derived from an Oxisol.

    Science.gov (United States)

    Jiang, Jun; Dai, Zhaoxia; Sun, Rui; Zhao, Zhenjie; Dong, Ying; Hong, Zhineng; Xu, Renkou

    2017-07-01

    Iron oxides are dominant effective adsorbents for arsenate in iron oxide-rich variable charge soils. Oxisol-derived paddy soils undergo intensive ferrolysis, which results in high leaching and transformation of iron oxides. However, little information is available concerning the effect of ferrolysis on arsenate adsorption by paddy soil and parent Oxisol. In the present study, we examined the arsenate affinity of soils using arsenate adsorption/desorption isotherms, zeta potential, adsorption kinetics, pH effect and phosphate competition experiments. Results showed that ferrolysis in an alternating flooding-drying Oxisol-derived paddy soil resulted in a significant decrease of free iron oxides and increase of amorphous iron oxides in the surface and subsurface layers. There were more reactive sites exposed on amorphous than on crystalline iron oxides. Therefore, disproportionate ratios of arsenate adsorption capacities and contents of free iron oxides were observed in the studied Oxisols compared with paddy soils. The Gibbs free energy values corroborated that both electrostatic and non-electrostatic adsorption mechanisms contributed to the arsenate adsorption by bulk soils, and the kinetic adsorption data further suggested that the rate-limiting step was chemisorption. The zeta potential of soil colloids decreased after arsenate was adsorbed on the surfaces, forming inner-sphere complexes and thus transferring their negative charges to the soil particle surfaces. The adsorption/desorption isotherms showed that non-electrostatic adsorption was the main mechanism responsible for arsenate binding to the Oxisol and derived paddy soils, representing 91.42-94.65% of the adsorption capacities. Further studies revealed that arsenate adsorption was greatly inhibited by increasing suspension pH and incorporation of phosphate. Copyright © 2017 Elsevier Ltd. All rights reserved.

  5. The distribution of arsenate and arsenite in shoots and roots of Holcus lanatus is influenced by arsenic tolerance and arsenate and phosphate supply.

    Science.gov (United States)

    Quaghebeur, Mieke; Rengel, Zdenko

    2003-07-01

    The recent discovery that phytochelatins are important for arsenic (As) detoxification in terrestrial plants results in the necessity to understand As speciation and metabolism in plant material. A hydroponic study was therefore conducted to examine the effects of different levels of phosphate and arsenate [As(V)] on As speciation and distribution in tolerant and non-tolerant clones of Holcus lanatus. Speciation of As in tissue (using high-performance liquid chromatography-inductively coupled plasma mass spectrometry) revealed that the predominant species present were the inorganic As species (As(V) and arsenite [As(III)]), although small levels (<1%) of organic As species (dimethylarsinic acid and monomethylarsonic acid) were detected in shoot material. In roots, the proportion of total As present as As(III) generally increased with increasing levels of As(V) in the nutrient solution, whereas in shoots, the proportion of total As present as As(III) generally decreased with increasing levels of As(V). H. lanatus plants growing in the high-phosphorus (P) (100 micro M) solution contained a higher proportion of As(V) (with regard to total As) in both roots and shoots than plants supplied with low P (10 micro M); in addition, tolerant clones generally contained a higher proportion of As(V) with regard to total As than non-tolerant clones. The study further revealed that As(V) can be reduced to As(III) in both roots and shoots. Although the reduction capacity was limited, the reduction was closely regulated by As influx for all treatments. The results therefore provide a new understanding about As metabolism in H. lanatus.

  6. Sulfur globule oxidation in green sulfur bacteria is dependent on the dissimilatory sulfite reductase system

    DEFF Research Database (Denmark)

    Holkenbrink, Carina; Ocón Barbas, Santiago; Mellerup, Anders;

    2011-01-01

    Green sulfur bacteria oxidize sulfide and thiosulfate to sulfate with extracellular globules of elemental sulfur as intermediate. Here we investigated which genes are involved in the formation and consumption of these sulfur globules in the green sulfur bacterium Chlorobaculum tepidum. We show...... that sulfur globule oxidation is strictly dependent on the dissimilatory sulfite reductase (DSR) system. Deletion of dsrM/CT2244 or dsrT/CT2245 or the two dsrCABL clusters (CT0851-CT0854, CT2247-2250) abolished sulfur globule oxidation and prevented formation of sulfate from sulfide, whereas deletion of dsr...

  7. Fate of sodium arsenate in dairy sheep and goats.

    Science.gov (United States)

    Shariatpanahi, M; Anderson, A C

    1985-08-01

    This study followed the uptake, distribution, and elimination of sodium arsenate administered in a single dose and in multiple doses, respectively, to Iranian dairy sheep and goats. In the single dosing study, the blood concentration data fit an open two-compartment model of the form:C b (t)=-(A+B)e (-kat) +Ae (-αt) +Be (-βt) Absorption distribution and elimination rate constants were statistically significantly different for the two animal species. In the multiple dosing study, arsenic accumulated in the blood of both animal species, as expressed by a one compartment model of the form:C t =C ss (1-e (-kt) ) Arsenic was eliminated rapidly at the termination of dosing, with the blood washout half-life being shorter in sheep than in goats. Urinary excretion was the major elimination route from the body of both species.

  8. An alternate pathway of arsenate resistance in E. coli mediated by the glutathione S-transferase GstB.

    Science.gov (United States)

    Chrysostomou, Constantine; Quandt, Erik M; Marshall, Nicholas M; Stone, Everett; Georgiou, George

    2015-03-20

    Microbial arsenate resistance is known to be conferred by specialized oxidoreductase enzymes termed arsenate reductases. We carried out a genetic selection on media supplemented with sodium arsenate for multicopy genes that can confer growth to E. coli mutant cells lacking the gene for arsenate reductase (E. coli ΔarsC). We found that overexpression of glutathione S-transferase B (GstB) complemented the ΔarsC allele and conferred growth on media containing up to 5 mM sodium arsenate. Interestingly, unlike wild type E. coli arsenate reductase, arsenate resistance via GstB was not dependent on reducing equivalents provided by glutaredoxins or a catalytic cysteine residue. Instead, two arginine residues, which presumably coordinate the arsenate substrate within the electrophilic binding site of GstB, were found to be critical for transferase activity. We provide biochemical evidence that GstB acts to directly reduce arsenate to arsenite with reduced glutathione (GSH) as the electron donor. Our results reveal a pathway for the detoxification of arsenate in bacteria that hinges on a previously undescribed function of a bacterial glutathione S-transferase.

  9. Stoichiometric modelling of assimilatory and dissimilatory biomass utilisation in a microbial community

    Science.gov (United States)

    Hunt, Kristopher A.; Jennings, Ryan deM.; Inskeep, William P.; Carlson, Ross P.

    2017-01-01

    Summary Assimilatory and dissimilatory utilisation of autotroph biomass by heterotrophs is a fundamental mechanism for the transfer of nutrients and energy across trophic levels. Metagenome data from a tractable, thermoacidophilic microbial community in Yellowstone National Park was used to build an in silico model to study heterotrophic utilisation of autotroph biomass using elementary flux mode analysis and flux balance analysis. Assimilatory and dissimilatory biomass utilisation was investigated using 29 forms of biomass-derived dissolved organic carbon (DOC) including individual monomer pools, individual macromolecular pools and aggregate biomass. The simulations identified ecologically competitive strategies for utilizing DOC under conditions of varying electron donor, electron acceptor or enzyme limitation. The simulated growth environment affected which form of DOC was the most competitive use of nutrients; for instance, oxygen limitation favoured utilisation of less reduced and fermentable DOC while carbon-limited environments favoured more reduced DOC. Additionally, metabolism was studied considering two encompassing metabolic strategies: simultaneous versus sequential use of DOC. Results of this study bound the transfer of nutrients and energy through microbial food webs, providing a quantitative foundation relevant to most microbial ecosystems. PMID:27387069

  10. Structure of Amorphous Ferric Arsenate from EXAFS Spectroscopy and Total X-ray Scattering

    Science.gov (United States)

    Mikutta, Christian; Michel, Frederick Marc; Mandaliev, Petar; Kretzschmar, Ruben

    2013-04-01

    Short-range ordered ferric arsenate (FeAsO4 ×nH2O) is a secondary As mineral frequently encountered in acid mine-waste environments. Its structure has been proposed to resemble that of scorodite (FeAsO4×2H2O) in which isolated FeO6 octahedra share corners with four adjacent arsenate (AsO4) tetrahedra in a three-dimensional network (scorodite model). Conversely, short-range ordered ferric arsenate was postulated to consist of single chains of corner-sharing FeO6 octahedra being bridged by arsenate bound in a monodentate binuclear 2C complex (butlerite/fibroferrite model). In order to test the accuracy of both structural models, we synthesized ferric arsenates and analyzed their structure by As and Fe K-edge extended X-ray absorption fine structure (EXAFS) spectroscopy and total X-ray scattering. We found that both As and Fe K-edge EXAFS spectra were most compatible with isolated FeO6 octahedra being bridged by AsO4 tetrahedra (RFe-As= 3.33 ± 0.01 Å). EXAFS shell-fits and reduced pair distribution functions, G(r), indicated a lack of evidence for single corner-sharing FeO6 linkages in ferric arsenate. Wavelet-transform analyses of the Fe K-edge EXAFS spectra of ferric arsenates complemented by shell fitting confirmed Fe atoms at an average distance of 5.3 Å, consistent with crystallographic data of scorodite and in disagreement with the butlerite/fibroferrite model. A scorodite-type local structure of short-range ordered ferric arsenates provides a plausible explanation for their rapid transformation into scorodite in acid mining environments.

  11. Simultaneous removal of chromium and arsenate from contaminated groundwater by ferrous sulfate: Batch uptake behavior

    Institute of Scientific and Technical Information of China (English)

    Xiaohong Guan; Haoran Dong; Jun Ma; Irene M. C. Lo

    2011-01-01

    Chromium and/or arsenate removal by Fe(Ⅱ) as a function of pH, Fe(Ⅱ) dosage and initial Cr(Ⅵ)/As(Ⅴ) ratio were examined in batch tests.The presence of arsenate reduced the removal efficiency of chromium by Fe(Ⅱ), while the presence of chromate significantly increased the removal efficiency of arsenate by Fe(Ⅱ) at pH 6-8.In the absence of arsenate, chromium removal by Fe(Ⅱ) increased to a maximum with increasing pH from 4 to 7 and then decreased with a further increase in pH.The increment in Fe(Ⅱ) dosage resulted in an improvement in chromium removal and the improvement was more remarkable under alkaline conditions than that under acidic conditions.Chromium removal by Fe(Ⅱ) was reduced to a larger extent under neutral and alkaline conditions than that under acidic conditions due to the presence of 10 μmol/L arsenate.The presence of 20 μmol/L arsenate slightly improved chromium removal by Fe(Ⅱ) at pH 3.9-5.8, but had detrimental effects at pH 6.7-9.8.Arsenate removal was improved significantly at pH 4-9 due to the presence of 10 μmol/L chromate at Fe(Ⅱ) dosages of 20-60 μmol/L.Elevating the chromate concentration from 10 to 20 μmol/L resulted in a further improvement in arsenate removal at pH 4.0-4.6 when Fe(Ⅱ) was dosed at 30-60 μmol/L.

  12. Evidence for the aquatic binding of arsenate by natural organic matter-suspended Fe(III)

    Science.gov (United States)

    Ritter, K.; Aiken, G.R.; Ranville, J.F.; Bauer, M. E.; Macalady, D.L.

    2006-01-01

    Dialysis experiments with arsenate and three different NOM samples amended with Fe(III) showed evidence confirming the formation of aquatic arsenate-Fe(III)-NOM associations. A linear relationship was observed between the amount of complexed arsenate and the Fe(III) content of the NOM. The dialysis results were consistent with complex formation through ferric iron cations acting as bridges between the negatively charged arsenate and NOM functional groups and/or a more colloidal association, in which the arsenate is bound by suspended Fe(III)-NOM colloids. Sequential filtration experiments confirmed that a significant proportion of the iron present at all Fe/C ratios used in the dialysis experiments was colloidal in nature. These colloids may include larger NOM species that are coagulated by the presence of chelated Fe(III) and/or NOM-stabilized ferric (oxy)hydroxide colloids, and thus, the solution-phase arsenate-Fe(III)-NOM associations are at least partially colloidal in nature. ?? 2006 American Chemical Society.

  13. Interactive effects of arsenate, selenium, and dietary protein on survival, growth, and physiology in mallard ducklings

    Science.gov (United States)

    Hoffman, D.J.; Sanderson, C.J.; LeCaptain, L.J.; Cromartie, E.; Pendleton, G.W.

    1992-01-01

    High concentrations of arsenic (As) and selenium (Se) have been found in aquatic food chains associated with irrigation drainwater. Total biomass of invertebrates, a maJor source of protein for wild ducklings, may vary in environments that are contaminated with selenium. Dayold mallard (Anas platyrhynchos) ducklings received an untreated diet (controls) containing 22% protein or diets containing 15 ppm Se (as selenomethionine), 60 ppm Se, 200 ppm As (as sodium arsenate), 15 ppm Se with 200 ppm As, or 60 ppm Se with 200 ppm As. In a concurrent experiment, the same sequence was repeated with a proteinrestricted (7%) but isocaloric diet. After 4 weeks, blood and tissue samples were collected for biochemical and histological examination. With 22% protein and 60 ppm Se in the diet, duckling survival and growth was reduced and livers had histopathological lesions. Arsenic alone caused some reduction in growth. Antagonistic interactive effects occurred between As and Se, including complete to partial alleviation of the following Se effects: mortality, impaired growth, hepatic lesions and lipid peroxidation, and altered glutathione and thiol status. With 7% protein, survival and growth of controls was less than that with 22% protein, Se (60 ppm) caused 100% mortality, and As (200 ppm) caused mortality, decreased growth, and liver histopathology. These findings suggest the potential for antagonistic effects of Se and As on duckling survival, growth, and physiology with adequate dietary protein but more severe toxicological effects when dietary protein is diminished.

  14. Stability of arsenate-bearing Fe(III)/Al(III) co-precipitates in the presence of sulfide as reducing agent under anoxic conditions.

    Science.gov (United States)

    Doerfelt, Christoph; Feldmann, Thomas; Roy, Ranjan; Demopoulos, George P

    2016-05-01

    Currently, the co-precipitation of arsenate with ferric iron at molar ratios Fe(III)/As(V) ≥ 3 by lime neutralization produces tailings solids that are stable under oxic conditions. However not much is known about the stability of these hazardous co-precipitates under anoxic conditions. These can develop in tailings storage sites by the action of co-discharged reactive sulfides, organic reagent residuals or bacterial activity. The ferric matrix can then undergo reductive dissolution reactions, which could release arsenic into the pore water. Co-ions like aluminum could provide a redox-immune sink to scavenge any mobilized arsenic as a result of reduction of ferric. As such, in this work Fe(III)/As(V) = 4 and aluminum substituted Fe(III)/Al(III)/As(V) = 2/2/1 co-precipitates were produced in a mini continuous co-precipitation process circuit and subjected to excess sulfide addition under inert gas to evaluate their stability. It was found that the ferric-arsenate co-precipitate could retain up to 99% (30 mg/L in solution) of its arsenic content despite the high pH (10.5) and extremely reducing (Eh ferric iron was reduced. Partial aluminum substitution was found to cut the amount of mobilized arsenic by 50% (down to 15 mg/L) hence mixed Fe(III)/Al(III)-arsenate co-precipitates may offer better resistance to reductive destabilization over the long term than all iron co-precipitates. Copyright © 2016 Elsevier Ltd. All rights reserved.

  15. Subchronic dispositional and toxicological effects of arsenate administered in drinking water to mice.

    Science.gov (United States)

    Hughes, M F; Thompson, D J

    1996-10-11

    Exposure to the drinking water contaminant arsenate is a daily occurrence and there are concerns that this exposure may lead to cancer. Although the acute dispositional effects of arsenate have been studied in detail, there is minimal information on the disposition and toxicological effects of it after continuous exposure. The objective of this study was to examine in mice the effect of a 4-wk treatment with arsenate administered in drinking water. Female B6C3F1 mice (3/cage) were housed in metabolism cages and given water and food ad libitum. Two groups (A, B) of mice were treated (4 cages/treatment/group) with distilled water (control, C) or water containing 0.025 mg/L (L) or 2.5 mg/L (H) arsenate. Group A was sacrificed on d 28 and plasma and urine samples were taken for determination of clinical chemistry parameters. Liver and kidney tissue samples were taken for histopathological analysis. The reduced nonprotein sulfhydryl (NPSH) content in several tissues was determined. Group B was gavaged with [73As]arsenate on d 28 and continued the arsenate drinking water exposure for 48 h. Excreta and tissues were collected and analyzed for 73As. Urine was further analyzed for arsenate and its metabolites. There were no effects on the mean daily amount of water and food consumed, whereas the mean daily urine volume excreted was significantly elevated by 10% in the H-treated animals compared to C and L. A dose-related hepatic vacuolar degeneration in the liver was observed, but no histological changes were evident in the kidney. Only clinical chemistry parameters in plasma were altered by the arsenate treatment. Glucose was significantly lower at the H dose compared to C and L, triglycerides were significantly greater in C than L and H, and creatinine was significantly greater in H than C. Hepatic NPSH content in the H animals was significantly lower than C and L animals, whereas no effects in lung and kidney were detected. The weights of liver, lung, and kidney, as well

  16. Competitive adsorption of arsenate and phosphate onto calcite; experimental results and modeling with CCM and CD-MUSIC

    DEFF Research Database (Denmark)

    Sø, Helle Ugilt; Postma, Dieke; Jakobsen, Rasmus;

    2012-01-01

    The competitive adsorption of arsenate and phosphate onto calcite was studied in batch experiments using calcite-equilibrated solutions. The solutions had circum-neutral pH (7–8.3) and covered a wide span in the activity of Ca2+ and View the MathML source. The results show that the adsorption...... that adsorption of arsenate onto calcite is of minor importance in most groundwater aquifers, as phosphate is often present at concentration levels sufficient to significantly reduce arsenate adsorption. The CD-MUSIC model for calcite was used successfully to model adsorption of arsenate and phosphate separately...

  17. Surface chemistry of ferrihydrite: Part 1. EXAFS studies of the geometry of coprecipitated and adsorbed arsenate

    Science.gov (United States)

    Waychunas, G. A.; Rea, B. A.; Fuller, C. C.; Davis, J. A.

    1993-05-01

    EXAFS spectra were collected on both the As and Fe K-edges from samples of two-line ferrihydrite with adsorbed (ADS) and coprecipitated (CPT) arsenate prepared over a range of conditions and arsenate surface coverages. Spectra also were collected for arsenate adsorbed on the surfaces of three FeOOH crystalline polymorphs, α (goethite), β (akaganeite), and γ (lepidocrocite), and as a free ion in aqueous: solution. Analyses of the As EXAFS show clear evidence for inner sphere bidentate (bridging) arsenate complexes on the ferrihydrite surface and on the surfaces of the crystalline FeOOH polymorphs. The bridging arsenate is attached to adjacent apices of edge-sharing Fe oxyhydroxyl octahedra. The arsenic-iron distance at the interface ( 3.28 ±0.01 Å) is close to that expected for this geometry on the FeOOH polymorph surfaces, but is slightly shorter on the ferrihydrite surfaces ( 3.25 ± 0.02 Å). Mono-dentate arsenate linkages ( 3.60 ± 0.03 Å) also occur on the ferrihydrite, but are not generally observed on the crystalline FeOOH polymorphs. The proportion of monodentate bonds appears largest for adsorption samples with the smallest As/Fe molar ratio. In all cases the arsenate tetrahedral complex is relatively undistorted with As-O bonds of 1.66 ± 0.01 Å. Precipitation of arsenate or scorodite-like phases was not observed for any samples, all of which were prepared at a pH value of 8. The Fe EXAFS results confirm that the Fe-Fe correlations in the ferrihydrite are progressively disrupted in the CPT samples as the As/Fe ratio is increased. Coherent crystallite size is probably no more than 10 Å in diameter and no Fe oxyhydroxyl octahedra corner-sharing linkages (as would be present in FeOOH polymorphs) are observed at the largest As/Fe ratios. Comparison of the number and type of Fe-Fe neighbors with the topological constraints imposed by the arsenate saturation limit in the CPT samples (about 0.7 As/Fe) indicates ferrihydrite units consisting mainly of Fe

  18. ars1, an Arabidopsis mutant exhibiting increased tolerance to arsenate and increased phosphate uptake.

    Science.gov (United States)

    Lee, David A; Chen, Alice; Schroeder, Julian I

    2003-09-01

    Arsenic is one of the most toxic pollutants at contaminated sites, yet little is known about the mechanisms by which certain plants survive exposure to high arsenic levels. To gain insight into the mechanisms of arsenic tolerance in plants, we developed a genetic screen to isolate Arabidopsis thaliana mutants with altered tolerance to arsenic. We report here on the isolation of a mutant arsenic resisant 1 (ars1) with increased tolerance to arsenate. ars1 germinates and develops under conditions that completely inhibit growth of wild-type plants and shows a semi-dominant arsenic resistance phenotype. ars1 accumulates levels of arsenic similar to that accumulated by wild-type plants, suggesting that ars1 plants have an increased ability to detoxify arsenate. However, ars1 plants produce phytochelatin levels similar to levels produced by the wild type, and the enhanced resistance of ars1 is not abolished by the gamma-glutamylcysteine synthetase inhibitor l-buthionine sulfoxime (BSO). Furthermore, ars1 plants do not show resistance to arsenite or other toxic metals such as cadmium and chromium. However, ars1 plants do show a higher rate of phosphate uptake than that shown by wild-type plants, and wild-type plants grown with an excess of phosphate show increased tolerance to arsenate. Traditional models of arsenate tolerance in plants are based on the suppression of phosphate uptake pathways and consequently on the reduced uptake of arsenate. Our data suggest that arsenate tolerance in ars1 could be due to a new mechanism mediated by increased phosphate uptake in ars1. Models discussing how increased phosphate uptake could contribute to arsenate tolerance are discussed.

  19. Fabrication and evolution of multilayer silver nanofilms for surface-enhanced Raman scattering sensing of arsenate

    Directory of Open Access Journals (Sweden)

    Li Jinwei

    2011-01-01

    Full Text Available Abstract Surface-enhanced Raman scattering (SERS has recently been investigated extensively for chemical and biomolecular sensing. Multilayer silver (Ag nanofilms deposited on glass slides by a simple electroless deposition process have been fabricated as active substrates (Ag/GL substrates for arsenate SERS sensing. The nanostructures and layer characteristics of the multilayer Ag films could be tuned by varying the concentrations of reactants (AgNO3/BuNH2 and reaction time. A Ag nanoparticles (AgNPs double-layer was formed by directly reducing Ag+ ions on the glass surfaces, while a top layer (3rd-layer of Ag dendrites was deposited on the double-layer by self-assembling AgNPs or AgNPs aggregates which had already formed in the suspension. The SERS spectra of arsenate showed that characteristic SERS bands of arsenate appear at approximately 780 and 420 cm-1, and the former possesses higher SERS intensity. By comparing the peak heights of the approximately 780 cm-1 band of the SERS spectra, the optimal Ag/GL substrate has been obtained for the most sensitive SERS sensing of arsenate. Using this optimal substrate, the limit of detection (LOD of arsenate was determined to be approximately 5 μg·l-1.

  20. Utilization of activated CO2-neutralized red mud for removal of arsenate from aqueous solutions.

    Science.gov (United States)

    Sahu, Ramesh Chandra; Patel, Rajkishore; Ray, Bankim Chandra

    2010-07-15

    A laboratory study was conducted to investigate the ability of activated CO(2)-neutralized red mud (ANRM) for the removal of arsenate from the aqueous solutions. The batch adsorption experiments were conducted with respect to adsorbent dose, equilibrium pH, contact time, initial arsenate concentration, kinetics, Langmuir isotherms. The mechanisms involved in adsorption of arsenate ions on ANRM were characterized by using XRD, FT-IR, UV-vis, SEM/EDX, and chemical methods. The percentage removal was found to increase gradually with decrease of pH and maximum removal was achieved at pH approximately 4. Adsorption kinetic studies revealed that the adsorption process followed pseudo-second-order kinetics and equilibrates within 24 h. FT-IR spectra of ANRM before and after adsorption reveals the binding of arsenate to the adsorbent. The adsorption data were fitted to linearly transformed Langmuir isotherm with R(2) (correlation coefficient)>0.99. Arsenate adsorbed ANRM can be regenerated using NaOH solution at pH 12.0.

  1. Arsenate removal with 3-mercaptopropanoic acid-coated superparamagnetic iron oxide nanoparticles.

    Science.gov (United States)

    Morillo, D; Uheida, A; Pérez, G; Muhammed, M; Valiente, M

    2015-01-15

    In the present work, superparamagnetic iron oxide nanoparticles (SPION) surface-coated with 3-mercaptopropanoic acid (3-MPA) were prepared and their feasibility for the removal of arsenate from dilute aqueous solutions was demonstrated. The synthesized 3-MPA-coated SPION was characterized using transmission electron microscopy (TEM), thermogravimetric analysis (TGA) and Fourier transform infra-red spectrometry (FTIR). Separation efficiency of the coated nanoparticles and the equilibrium isotherm of arsenate adsorption were investigated. The obtained results reveal the arsenate adsorption to be highly pH-dependent, and the maximum adsorption was attained in less than 60 min. The resulting increase of 3-MPA-coated SPION adsorption capacity to twice the adsorption capacity of SPION alone under the same conditions is attributed to the increase of active adsorption sites. An adsorption reaction is proposed. On the other hand, efficient recovery of arsenate from the loaded nanoparticles was achieved using nitric acid (HNO3) solution, which also provides a concentration over the original arsenate solution.

  2. Arsenate removal by layered double hydroxides embedded into spherical polymer beads: Batch and column studies.

    Science.gov (United States)

    Nhat Ha, Ho Nguyen; Kim Phuong, Nguyen Thi; Boi An, Tran; Mai Tho, Nguyen Thi; Ngoc Thang, Tran; Quang Minh, Bui; Van Du, Cao

    2016-01-01

    In this study, the performance of poly(layered double hydroxides) [poly(LDHs)] beads as an adsorbent for arsenate removal from aqueous solution was investigated. The poly(LDHs) beads were prepared by immobilizing LDHs into spherical alginate/polyvinyl alcohol (PVA)-glutaraldehyde beads (spherical polymer beads). Batch adsorption studies were conducted to assess the effect of contact time, solution pH, initial arsenate concentrations and co-existing anions on arsenate removal performance. The potential reuse of these poly(LDHs) beads was also investigated. Approximately 79.1 to 91.2% of arsenic was removed from an arsenate solution (50 mg As L(-1)) by poly(LDHs). The adsorption data were well described by the pseudo-second-order kinetics model and the Langmuir isotherm model, and the adsorption capacities of these poly(LDHs) beads at pH 8 were from 1.64 to 1.73 mg As g(-1), as calculated from the Langmuir adsorption isotherm. The adsorption ability of the poly(LDHs) beads decreased by approximately 5-6% after 5 adsorption-desorption cycles. Phosphates markedly decreased arsenate removal. The effect of co-existing anions on the adsorption capacity declined in the following order: HPO4 (2-) > HCO3 (-) > SO4 (2-) > Cl(-). A fixed-bed column study was conducted with real-life arsenic-containing water. The breakthrough time was found to be from 7 to 10 h. Under optimized conditions, the poly(LDHs) removed more than 82% of total arsenic. The results obtained in this study will be useful for further extending the adsorbents to the field scale or for designing pilot plants in future studies. From the viewpoint of environmental friendliness, the poly(LDHs) beads are a potential cost-effective adsorbent for arsenate removal in water treatment.

  3. Inherited resistance to arsenate toxicity in two populations of Lumbricus rubellus.

    Science.gov (United States)

    Langdon, Caroline J; Piearce, Trevor G; Meharg, Andrew A; Semple, Kirk T

    2003-10-01

    No unequivocal evidence exists of genetically inherited resistance to metals/metalloids in field populations of earthworms. We studied cocoon production in adult Lumbricus rubellus Hoffmeister collected from an abandoned arsenic and copper mine (Devon Great Consols, Devon, UK), and abandoned tungsten mine (Carrock Fell, Cumbria, UK) and an uncontaminated cultured population. The earthworms were kept in uncontaminated soil for nine weeks. From a total of 42 L. rubellus from each site, Devon Great Consols adults produced 301 cocoons, of which 42 were viable; Carrock Fell 60 cocoons, of which 11 were viable; and the reference population 101 cocoons, of which 62 were viable. The hatchlings were collected and stored at 4 degrees C at weekly intervals. After 12 weeks, all hatchlings were transferred to clean soil and maintained at 15 degrees C for 20 weeks until they showed evidence of a clitellum. In toxicity trials, F1 generation L. rubellus were exposed to 2,000 mg As/kg as sodium arsenate or 300 mg Cu/kg as copper chloride for 28 d. The F1 generation L. rubellus from Devon Great Consols mine demonstrated resistance to arsenate but not copper. All L. rubellus from Devon Great Consols kept in soil treated with sodium arsenate remained in good condition over the 28-d period but lost condition rapidly and suffered high mortality in soil treated with copper chloride. The control population suffered high mortality in soil treated with sodium arsenate and copper chloride. Previous work has shown that field-collected adults demonstrate resistance to both arsenate and Cu toxicity under these conditions. Thus, while arsenate resistance may be demonstrated in F1 generation L. rubellus from one of the contaminated sites, Cu resistance is not. The F1 adults and F2 cocoons did not have significantly higher levels of As than the control population, with no residual As tissue burden, suggesting that resistance to As in these populations may be inherited.

  4. Phosphate and arsenate removal efficiency by thermostable ferritin enzyme from Pyrococcus furiosus using radioisotopes

    KAUST Repository

    Sevcenco, Ana-Maria

    2015-03-13

    Oxo-anion binding properties of the thermostable enzyme ferritin from Pyrococcus furiosus were characterized with radiography. Radioisotopes 32P and 76As present as oxoanions were used to measure the extent and the rate of their absorption by the ferritin. Thermostable ferritin proved to be an excellent system for rapid phosphate and arsenate removal from aqueous solutions down to residual concentrations at the picomolar level. These very low concentrations make thermostable ferritin a potential tool to considerably mitigate industrial biofouling by phosphate limitation or to remove arsenate from drinking water.

  5. Synthesis of mesoporous Cu/Mg/Fe layered double hydroxide and its adsorption performance for arsenate in aqueous solutions

    Institute of Scientific and Technical Information of China (English)

    Yanwei Guo; Zhiliang Zhu; Yanling Qiu; Jianfu Zhao

    2013-01-01

    The mesoporous Cu/Mg/Fe layered double hydroxide (Cu/Mg/Fe-LDH) with carbonate intercalation was synthesized and used for the removal of arsenate from aqueous solutions.The Cu/Mg/Fe-LDH was characterized by Fourier transform infrared spectrometry,X-ray diffraction crystallography,scanning electron microscopy,X-ray photoelectron spectroscopy and Brunauer-Emmett-Teller.Effects of various physico-chemical parameters such as pH,adsorbent dosage,contact time and initial arsenate concentration on the adsorption of arsenate onto Cu/Mg/Fe-LDH were investigated.Results showed that it was efficient for the removal of arsenate,and the removal efficiency of arsenate increased with the increment of the adsorbent dosage,while the arsenate adsorption capacity decreased with increase of initial pH from 3 to 11.The adsorption isotherms can be well described by the Langmuir model with R2 > 0.99.Its adsorption kinetics followed the pseudo second-order kinetic model.Coexisting ions such as HPO42-,CO32-,SO42-and NO3-could compete with arsenate for adsorption sites on the Cu/Mg/Fe-LDH.The adsorption of arsenate on the adsorbent can be mainly attributed to the ion exchange process.It was found that the synthesized Cu/Mg/Fe-LDH can reduce the arsenate concentration down to a final level of < 10 μg/L under the experimental conditions,and makes it a potential material for the decontamination of arsenate polluted water.

  6. Formation of iron (hydr)oxides during the abiotic oxidation of Fe(II) in the presence of arsenate.

    Science.gov (United States)

    Song, Jia; Jia, Shao-Yi; Yu, Bo; Wu, Song-Hai; Han, Xu

    2015-08-30

    Abiotic oxidation of Fe(II) is a common pathway in the formation of Fe (hydr)oxides under natural conditions, however, little is known regarding the presence of arsenate on this process. In hence, the effect of arsenate on the precipitation of Fe (hydr)oxides during the oxidation of Fe(II) is investigated. Formation of arsenic-containing Fe (hydr)oxides is constrained by pH and molar ratios of As:Fe during the oxidation Fe(II). At pH 6.0, arsenate inhibits the formation of lepidocrocite and goethite, while favors the formation of ferric arsenate with the increasing As:Fe ratio. At pH 7.0, arsenate promotes the formation of hollow-structured Fe (hydr)oxides containing arsenate, as the As:Fe ratio reaches 0.07. Arsenate effectively inhibits the formation of magnetite at pH 8.0 even at As:Fe ratio of 0.01, while favors the formation of lepidocrocite and green rust, which can be latterly degenerated and replaced by ferric arsenate with the increasing As:Fe ratio. This study indicates that arsenate and low pH value favor the slow growth of dense-structured Fe (hydr)oxides like spherical ferric arsenate. With the rapid oxidation rate of Fe(II) at high pH, ferric (hydr)oxides prefer to precipitate in the formation of loose-structured Fe (hydr)oxides like lepidocrocite and green rust. Copyright © 2015 Elsevier B.V. All rights reserved.

  7. The membrane QmoABC complex interacts directly with the dissimilatory adenosine 5´-phosphosulfate reductase in sulfate reducing bacteria

    Directory of Open Access Journals (Sweden)

    Ana Raquel Ramos

    2012-04-01

    Full Text Available The adenosine 5’-phosphosulfate reductase (AprAB is the enzyme responsible for the reduction of adenosine 5’-phosphosulfate (APS to sulfite in the biological process of dissimilatory sulfate reduction, which is carried out by a ubiquitous group of sulfate reducing prokaryotes. The electron donor for AprAB has not been clearly identified, but was proposed to be the QmoABC membrane complex, since an aprBA-qmoABC gene cluster is found in many sulfate-reducing and sulfur-oxidising bacteria. The QmoABC complex is essential for sulfate reduction, but electron transfer between QmoABC and AprAB has not been reported. In this work we provide the first direct evidence that QmoABC and AprAB interact in Desulfovibrio spp., using co-immunoprecipitation, cross-linking Far-Western blot, tag-affinity purification and surface plasmon resonance studies. This showed that the QmoABC-AprAB complex has a strong steady-state affinity (KD = 90 ± 3 nM, but has a transient character due to a fast dissociation rate. Far-Western blot identified QmoA as the Qmo subunit most involved in the interaction. Nevertheless, electron transfer from menaquinol analogues to APS through anaerobically purified QmoABC and AprAB could not be detected. We propose that this reaction requires the involvement of a third partner to allow electron flow driven by a reverse electron bifurcation process i.e. electron confurcation. This process is deemed essential to allow coupling of APS reduction to chemiosmotic energy conservation.

  8. Arsenate toxicity and metabolism in the halotolerant microalga Dunaliella salina under various phosphate regimes.

    Science.gov (United States)

    Wang, Ya; Zheng, Yanheng; Liu, Cong; Xu, Pingping; Li, Hao; Lin, Qiaoyun; Zhang, Chunhua; Ge, Ying

    2016-06-15

    Microalgae play an important role in arsenic (As) biogeochemical cycles as they are capable of accumulating and metabolizing this metalloid efficiently. This study aimed to investigate the toxicity, accumulation and transformation of arsenate (As(v)) in Dunaliella salina, an exceptionally halotolerant microalga, under various phosphate (PO4(3-)) regimes. The results of the 72-h toxicity test showed that D. salina was tolerant to As(v). In addition, the toxicity of As(v) was mitigated by an increased PO4(3-) supply. D. salina resisted the adverse effects of As(v) through the suppression of As uptake, enhancement of As reduction, methylation in the cell and excretion from the cell. Our study revealed that D. salina reduced As(v) toxicity using different strategies, i.e., reduction of As uptake upon acute As stress (24 h) and increase of As efflux following chronic As exposure (9 day). Moreover, PO4(3-) strongly affected the adsorption, uptake and transformation of As(v) in D. salina. As(v) reduction, DMA production and As excretion were enhanced under P-limited conditions (0.112 mg L(-1)) or upon higher As(v) exposure (1120 μg L(-1)). Furthermore, PO4(3-) had a significant influence on the As removal ability of D. salina. A high As removal efficiency (>95.6%) was observed in the 5-day cultures at an initial As concentration of 11.2 μg L(-1) and PO4(3-) of 0.112 and 1.12 mg L(-1). However, only 10.9% of total As was removed under 11.2 mg L(-1) PO4(3-) after 9 days of incubation. The findings of this study illustrate the pivotal roles of extracellular PO4(3-) in As(v) toxicity and metabolism, and the results may be relevant for future research on the minimization of As contamination in algal products as well as on the enhancement of As removal from the environment.

  9. Non-linear optical titanyl arsenates: Crystal growth and properties

    Science.gov (United States)

    Nordborg, Jenni Eva Louise

    Crystals are appreciated not only for their appearance, but also for their unique physical properties which are utilized by the photonic industry in appliances that we come across every day. An important part of enabling the technical use of optical devices is the manufacture of crystals. This dissertation deals with a specific group of materials called the potassium titanyl phosphate (KIP) family, known for their non-linear optical and ferroelectric properties. The isomorphs vary in their linear optical and dielectric properties, which can be tuned to optimize device performance by forming solid solutions of the different materials. Titanyl arsenates have a wide range of near-infrared transmission which makes them useful for tunable infrared lasers. The isomorphs examined in the present work were primarily RbTiOASO4 (RTA) and CsTiOAsO4 (CTA) together with the mixtures RbxCs 1-xTiOAsO4 (RCTA). Large-scale crystals were grown by top seeding solution growth utilizing a three-zone furnace with excellent temperature control. Sufficiently slow cooling and constant upward lifting produced crystals with large volumes useable for technical applications. Optical quality RTA crystals up to 10 x 12 x 20 mm were grown. The greater difficulty in obtaining good crystals of CTA led to the use of mixed RCTA materials. The mixing of rubidium and cesium in RCTA is more favorable to crystal growth than the single components in pure RTA and CTA. Mixed crystals are rubidium-enriched and contain only 20-30% of the cesium concentration in the flux. The cesium atoms show a preference for the larger cation site. The network structure is very little affected by the cation substitution; consequently, the non-linear optical properties of the Rb-rich isomorphic mixtures of RTA and CTA can be expected to remain intact. Crystallographic methods utilizing conventional X-ray tubes, synchrotron radiation and neutron diffraction have been employed to investigate the properties of the atomic

  10. Structural insights into dissimilatory sulfite reductases: Structure of desulforubidin from Desulfomicrobium norvegicum

    Directory of Open Access Journals (Sweden)

    Tania F. Oliveira

    2011-04-01

    Full Text Available Dissimilatory sulfite reductases (dSiRs are crucial enzymes in bacterial sulfur-based energy metabolism, which is likely to have been present in some of the earliest life forms on Earth. Several classes of dSiRs have been proposed on the basis of different biochemical and spectroscopic properties. Here, we describe the first structure of a dSiR from the desulforubidin (Drub class isolated from Desulfomicrobium (Dm. norvegicum. The desulforubidin structure is assembled as a2b2c2, in which two DsrC proteins are bound to the core [DsrA]2[DsrB]2 unit, as reported for the desulfoviridin (Dvir structure from Desulfovibrio (D. vulgaris. Unlike desulfoviridin, four sirohemes and eight [4Fe-4S] clusters are present in desulforubidin, but only two of the coupled siroheme-[4Fe-4S] cofactors are likely to be catalytically active. Mass spectrometry studies of purified desulforubidin and desulfoviridin show that both proteins may present different oligomeric complex forms that bind two, one or no DsrC proteins, providing an explanation for conflicting spectroscopic and biochemical results in the literature.

  11. Structural, biochemical and genetic characterization of dissimilatory ATP sulfurylase from Allochromatium vinosum.

    Directory of Open Access Journals (Sweden)

    Kristian Parey

    Full Text Available ATP sulfurylase (ATPS catalyzes a key reaction in the global sulfur cycle by reversibly converting inorganic sulfate (SO4 (2- with ATP to adenosine 5'-phosphosulfate (APS and pyrophosphate (PPi. In this work we report on the sat encoded dissimilatory ATP sulfurylase from the sulfur-oxidizing purple sulfur bacterium Allochromatium vinosum. In this organism, the sat gene is located in one operon and co-transcribed with the aprMBA genes for membrane-bound APS reductase. Like APS reductase, Sat is dispensible for growth on reduced sulfur compounds due to the presence of an alternate, so far unidentified sulfite-oxidizing pathway in A. vinosum. Sulfate assimilation also proceeds independently of Sat by a separate pathway involving a cysDN-encoded assimilatory ATP sulfurylase. We produced the purple bacterial sat-encoded ATP sulfurylase as a recombinant protein in E. coli, determined crucial kinetic parameters and obtained a crystal structure in an open state with a ligand-free active site. By comparison with several known structures of the ATPS-APS complex in the closed state a scenario about substrate-induced conformational changes was worked out. Despite different kinetic properties ATPS involved in sulfur-oxidizing and sulfate-reducing processes are not distinguishable on a structural level presumably due to the interference between functional and evolutionary processes.

  12. Bioaccumulation and oxidative stress in Daphnia magna exposed to arsenite and arsenate.

    Science.gov (United States)

    Fan, Wenhong; Ren, Jinqian; Li, Xiaomin; Wei, Chaoyang; Xue, Feng; Zhang, Nan

    2015-11-01

    Arsenic pollution and its toxicity to aquatic organisms have attracted worldwide attention. The bioavailability and toxicity of arsenic are highly related to its speciation. The present study investigated the differences in bioaccumulation and oxidative stress responses in an aquatic organism, Daphnia magna, induced by 2 inorganic arsenic species (As(III) and As(V)). The bioaccumulation of arsenic, Na(+) /K(+) -adenosine triphosphatase (ATPase) activity, reactive oxygen species (ROS) content, total superoxide dismutase (SOD) activity, total antioxidative capability, and malondialdehyde content in D. magna were determined after exposure to 500 µg/L of arsenite and arsenate for 48 h. The results showed that the oxidative stress and antioxidative process in D. magna exposed to arsenite and arsenate could be divided into 3 phases, which were antioxidative response, oxidation inhibition, and antioxidative recovery. In addition, differences in bioaccumulation, Na(+) /K(+) -ATPase activity, and total SOD activity were also found in D. magna exposed to As(III) and As(V). These differences might have been the result of the high affinity of As(III) with sulfhydryl groups in enzymes and the structural similarity of As(V) to phosphate. Therefore, arsenate could be taken up by organisms through phosphate transporters, could substitute for phosphate in biochemical reactions, and could lead to a change in the bioaccumulation of arsenic and activity of enzymes. These characteristics were the possible reasons for the different toxicity mechanisms in the oxidative stress process of arsenite and arsenate.

  13. Arsenate and phosphate adsorption in relation to oxides composition in soils: LCD modelling

    NARCIS (Netherlands)

    Cui, Y.; Weng, L.

    2013-01-01

    The pH dependent solid-solution distribution of arsenate and phosphate in five Dutch agricultural soil samples was measured in the pH range 4–8, and the results were interpreted using the LCD (ligand and charge distribution) adsorption modeling. The pH dependency is similar for both oxyanions, with

  14. Relief of arsenate toxicity by Cd-stimulated phytochelatin synthesis in the green alga Chlamydomonas reinhardtii.

    Science.gov (United States)

    Kobayashi, Isao; Fujiwara, Shoko; Saegusa, Hirotaka; Inouhe, Masahiro; Matsumoto, Hiroko; Tsuzuki, Mikio

    2006-01-01

    In most photosynthetic organisms, inorganic arsenic taken up into the cells inhibits photosynthesis and cellular growth. In a green alga, Chlamydomonas reinhardtii, 0.5 mM arsenate inhibited photosynthesis almost completely within 30 min. However, in cells acclimated with a sublethal concentration (0.05 to 0.1 mM) of Cd, the inhibition of photosynthesis at 30 min after the addition of arsenate was relieved by more than 50%. The concentrations of arsenic incorporated into the cells were not significantly different between the Cd-acclimated and the non-acclimated cells. The Cd-acclimated cells accumulated Cd and synthesized phytochelatin (PC) peptides, which are known to play an important role in detoxification of heavy metals in plants. By the addition of an inhibitor of glutathione (an intermediate in the PC biosynthetic pathway) biosynthesis, buthionine sulfoximine, cells lost not only Cd tolerance but also arsenate tolerance. These results suggest that glutathione and/or PCs synthesized in Cd-acclimated cells are involved in mechanisms of arsenate tolerance.

  15. Arsenate and phosphate adsorption in relation to oxides composition in soils: LCD modelling

    NARCIS (Netherlands)

    Cui, Y.; Weng, L.

    2013-01-01

    The pH dependent solid-solution distribution of arsenate and phosphate in five Dutch agricultural soil samples was measured in the pH range 4–8, and the results were interpreted using the LCD (ligand and charge distribution) adsorption modeling. The pH dependency is similar for both oxyanions, with

  16. Evaluating the performance of modified adsorbent of zero valent iron nanoparticles – Chitosan composite for arsenate removal from aqueous solutions

    Directory of Open Access Journals (Sweden)

    K Yaghmaeian

    2016-03-01

    Full Text Available Background and Objective: Arsenic is one of the most toxic pollutants in groundwater and surface water. Arsenic could have lots of adverse impacts on human health. Therefore, access to new technologies is required to achieve the arsenic standard. Materials and Methods: The present study was conducted at laboratory scale in non-continuous batches. The adsorbent of zero-valent iron nanoparticles -Chitosan was produced through reducing ferric iron by sodium borohydride (NaBH4 in the presence of chitosan as a stabilizer. At first, the effect of various parameters such as contact time (5-120 min, pH (3-10, adsorbent dose (0.3-3.5 g/L and initial concentration of arsenate (2-10 mg/L were investigated on process efficiency. Then optimum conditions in terms of contact time, pH, adsorbent dose and initial concentration of arsenate were determined by RSM method. Freundlich and Langmuir isotherm model equilibrium constant, pseudo-first and second order kinetic constants were calculated. The residual arsenate was measured y using ICP-AES. Results: The optimum values based on RSM for pH, absorbent dose, contact time, and initial concentration of arsenate were 7.16, 3.04 g/L, 91.48 min, and 9.71 mg/L respectively. Langmuir isotherm with R2= 0.9904 for Arsenate was the best graph for the experimental data. According to Langmuir isotherm model, the maximum amount of arsenate adsorption was 135.14mg/g. . The investigation of arsenate adsorption kinetics showed that arsenate adsorption follows the pseudo-second kinetics model. Conclusion: This research showed that the adsorption process is depended on pH. With increasing pH, the ability of amine groups in chitosan are decreased to protonation, caused to decrease the efficiency of arsenate removal at high pH.

  17. Preparative separation of arsenate from phosphate by IRA-400 (OH) for oxygen isotopic work.

    Science.gov (United States)

    Tang, Xiaohui; Berner, Zsolt; Khelashvilli, Pirimze; Norra, Stefan

    2013-02-15

    The paper reports about a series of tests carried out to find out the optimal conditions for the preparative separation of arsenate and phosphate from natural waters, using the anion exchange resin Amberlite IRA-400 (OH). Freundlich isotherms have been constructed on basis of data obtained by stirring different amounts of resin (0.05-1.00 g) with solutions containing 1mg/L As and 10mg/L P in form of arsenate and phosphate and the effect of pH and P/As ratio on adsorption was investigated. It was found that at these concentrations 0.5 g of IRA-400 (OH) can adsorb quantitatively arsenate and phosphate within 1h. In a range of 3.6-11.1, pH seems to have no influence on the adsorption behavior of the resin, but at pH 1.5 the adsorption of both arsenate and phosphate drops to values close to zero. Experiments with solutions with P/As ratios in a range between 1 and 30 have shown that the concentration ratios have also little effect on adsorption. An efficient selective desorption of the anions could be achieved with 2 mol/L HNO3 or HCl, but the use of HCl is impracticable if the separation aims at precipitating arsenate for oxygen isotopic work. The reported adsorption/ desorption properties of the resin are supported also by data obtained by investigating the resin particles with a scanning electron microscope equipped with a fluorescence detection device.

  18. Sequential extraction of inorganic arsenic compounds and methyl arsenate in human urine using mixed-mode monolithic silica spin column coupled with gas chromatography-mass spectrometry.

    Science.gov (United States)

    Namera, Akira; Takeuchi, Akito; Saito, Takeshi; Miyazaki, Shota; Oikawa, Hiroshi; Saruwatari, Tatsuro; Nagao, Masataka

    2012-09-01

    A sequential analytical method was developed for the detection of arsenite, arsenate, and methylarsenate in human urine by gas chromatography-mass spectrometry (GC-MS). The combination of a derivatization of trivalent arsenic compounds by 2,3-dithio-1-propanol (British antilewisite; BAL) and a reduction of pentavalent arsenic compounds (arsenate and methylarsenate) were accomplished to carry out the analysis of arsenic compounds in urine. The arsenic derivatives obtained using BAL were extracted in a stepwise manner using a monolithic spin column and analyzed by GC-MS. A linear curve was observed for concentrations of arsenic compounds of 2.0 to 200 ng/mL, where the correlation coefficients of calibration curves were greater than 0.996 (for a signal-to-noise (S/N) ratio >10). The detection limits were 1 ng/mL (S/N > 3). Recoveries of the targets in urine were in the range 91.9-106.5%, and RSDs of the intra- and interday assay for urine samples containing 5, 50, and 150 ng/mL of arsenic compounds varied between 2.95 and 13.4%. The results from real samples obtained from a patient suspected of having ingested As containing medications using this proposed method were in good agreement with those obtained using high-performance liquid chromatography with inductively coupled plasma mass spectrometry.

  19. Mechanism of H2S Oxidation by the Dissimilatory Perchlorate-Reducing Microorganism Azospira suillum PS

    Science.gov (United States)

    Mehta-Kolte, Misha G.; Loutey, Dana; Wang, Ouwei; Youngblut, Matthew D.; Hubbard, Christopher G.; Wetmore, Kelly M.; Conrad, Mark E.

    2017-01-01

    ABSTRACT The genetic and biochemical basis of perchlorate-dependent H2S oxidation (PSOX) was investigated in the dissimilatory perchlorate-reducing microorganism (DPRM) Azospira suillum PS (PS). Previously, it was shown that all known DPRMs innately oxidize H2S, producing elemental sulfur (So). Although the process involving PSOX is thermodynamically favorable (ΔG°′ = −206 kJ ⋅ mol−1 H2S), the underlying biochemical and genetic mechanisms are currently unknown. Interestingly, H2S is preferentially utilized over physiological electron donors such as lactate or acetate although no growth benefit is obtained from the metabolism. Here, we determined that PSOX is due to a combination of enzymatic and abiotic interactions involving reactive intermediates of perchlorate respiration. Using various approaches, including barcode analysis by sequencing (Bar-seq), transcriptome sequencing (RNA-seq), and proteomics, along with targeted mutagenesis and biochemical characterization, we identified all facets of PSOX in PS. In support of our proposed model, deletion of identified upregulated PS genes traditionally known to be involved in sulfur redox cycling (e.g., Sox, sulfide:quinone reductase [SQR]) showed no defect in PSOX activity. Proteomic analysis revealed differential abundances of a variety of stress response metal efflux pumps and divalent heavy-metal transporter proteins, suggesting a general toxicity response. Furthermore, in vitro biochemical studies demonstrated direct PSOX mediated by purified perchlorate reductase (PcrAB) in the absence of other electron transfer proteins. The results of these studies support a model in which H2S oxidation is mediated by electron transport chain short-circuiting in the periplasmic space where the PcrAB directly oxidizes H2S to So. The biogenically formed reactive intermediates (ClO2− and O2) subsequently react with additional H2S, producing polysulfide and So as end products. PMID:28223460

  20. Dissimilatory nitrate reduction by Aspergillus terreus isolated from the seasonal oxygen minimum zone in the Arabian Sea

    Digital Repository Service at National Institute of Oceanography (India)

    Stief, P.; Fuchs-Ocklenburg, S.; Kamp, A.; Manohar, C.S.; Houbraken, J.; Boekhout, T.; deBeer, D.; Stoeck, T.

    concentrations of the extracts and the protein contents of the An-4 aggregates. Competing interests The authors declare that they have no competing interests. Authors’ contributions TS, PS, TB, and DDB conceived and designed the project. SFO, AK, and PS...

  1. Dissimilatory Nitrate Reduction to Ammonium (DNRA) potential in the re-connected floodplain of the River Cole (Oxfordshire, UK).

    Science.gov (United States)

    Sgouridis, F.; Heppell, C. M.; Trimmer, M.; Wharton, G.

    2009-04-01

    Floodplains are recognised as an important interface for nitrate removal at the landscape scale, but there is a lack of available information on the nitrate attenuation capacity of reconnected floodplains following river restoration. Whilst numerous studies have documented the dominant role of heterotrophic denitrification for nitrate loss in these environments, DNRA, a microbial pathway that conserves N in the ecosystem, has previously been considered unimportant in aerobic floodplain soils due mainly to its anoxic nature (Tiedje, 1988). However, recent research has shown DNRA to be of importance in N-limited, redox fluctuating tropical soils (Silver et al., 2001, Huygens et al., 2007). This could potentially be important in the context of temperate intermittently saturated reconnected river floodplains designed to tackle diffuse nitrate pollution. Therefore the objectives of this research were to quantify (i) the magnitude of and; (ii) factors controlling DNRA and denitrification potential in four different land use zones (grazing grassland, buffer zone, pasture and fritillary meadow), and with depth (0 - 120 cm) in a re-connected rural floodplain of the River Cole, UK. Denitrification and DNRA potential rates were measured with a combination of 15NO3- isotope tracer addition and combined microdiffusion - hypobromite oxidation methods. DNRA potential rates were approximately 40times less than denitrification potential rates, in all samples, ranging from 0.02 - 2.64 mg N and 7 - 24 mg N Kg-1 of dry soil day-1 respectively. Denitrification potential rates were found to be significantly different (P

  2. Effect of dissimilatory iron and sulfate reduction on Arsenic dynamics in the wetland rhizosphere and its bioaccumulation in plants

    Science.gov (United States)

    Zhang, Zheyun; Moon, Hee Sun; Myneni, Satish; Jaffe, Peter

    2015-04-01

    Arsenic (As) pollution in water soil and sediments is of worldwide concern due to its ecological toxicity and chronic effects on human health. Wetlands are at the interface between ground and surface waters and because of their unique biogeochemical dynamics could be promising location for arsenic immobilization. However, the nature of biogeochemical reactions of As in wetlands are complex and not well understood. The dynamics of As in wetland sediments are closely linked to the redox cycling of Fe and S, both of which are affected by water-table fluctuations and wetland plants activity that are typical in such environments. Little is not known about redox cycling of Fe or S and their effects on As speciation, biogeochemical dynamics, and bioaccumulation in the wetland rhizosphere and plants. To gain further insights into these processes, twelve mesocosms were set up and planted with wetland plants (Scirpus actus), six were submerged in a tray (reactor) with ~ 170 mM SO4-2 and six in a tray with ~ 350 uM SO4-2 and two levels of ferrihydrite in the soil for each SO4-2 treatment. Each mesocosm was sealed and the only contact with the solution in the reactor was via the surface of the mesocosm. The mesocosms were run for 1.5 months to establish the plants, after which 50μM Na2HAsO4·7H2O was added to the reactors. Water in the reactors was constantly recirculated to make the solution homogeneous. The reactors were run for 4 months and monitored regularly for dissolved species, and were then dismantled. Results show that the presence of plants, high Fe, and high SO42- levels enhanced As sequestration in the soil. We hypothesize that the reason for this compounding effect is that plants release easily biodegradable organic carbon, which is used by microorganism to reduce ferrihydrite and SO42- to generate FeS or FeS2. More As is then sequestrated via sorption or co-precipitation on FeS or FeS2. Analysis of As in plant tissue showed that As uptake by Scirpus actus was mainly controlled by SO42- rather than Fe levels. When dissolved SO42 levels decreased from ~ 170 mM to ~ 350 uM, As concentrations in plant tissue increased by 97%, whereas no significant changes in plant As levels were seen for varying Fe concentrations in the soil. The As distribution in plant leaves and roots after 30 days of exposure to As was analyzed via Synchrotron X-ray fluorescence analyses. Compared with controls (no As addition), the uptake of As by plants was distributed along leaves veins for all plants exposed to As. The distribution of As in roots was correlated with the distribution of Fe in the roots, rather than with Ca or Zn, indicating that As may be co-distributed with Fe in plants.

  3. Preabsorptive Metabolism of Sodium Arsenate by Anaerobic Microbiota of Mouse Cecum Forms a Variety of Methylated and Thiolated Arsenicals

    Science.gov (United States)

    The conventional scheme for arsenic methylation accounts for methylated oxyarsenical production but not for thioarsenical formation. Here, we report that in vitro anaerobic microbiota of mouse cecum converts arsenate into oxy- and thio- arsenicals. Besides methylarsonic acid (MMA...

  4. Oxalic acid as an assisting agent for the electrodialytic remediation of chromated copper arsenate treated timber waste

    DEFF Research Database (Denmark)

    Ribeiro, Alexandra B.; Mateus, Eduardo P.; Ottosen, Lisbeth M.

    1999-01-01

    The electrodialytic process is proposed as a technique for the remediation of chromated copper arsenate treated timber waste, using oxalic acid as assisting agent. The method prowed succesfull 93% Cu, 95% Cr and 99% As was removed from the timber.......The electrodialytic process is proposed as a technique for the remediation of chromated copper arsenate treated timber waste, using oxalic acid as assisting agent. The method prowed succesfull 93% Cu, 95% Cr and 99% As was removed from the timber....

  5. Oxalic acid as an assisting agent for the electrodialytic remediation of chromated copper arsenate treated timber waste

    DEFF Research Database (Denmark)

    Ribeiro, Alexandra B.; Mateus, Eduardo P.; Ottosen, Lisbeth M.

    1999-01-01

    The electrodialytic process is proposed as a technique for the remediation of chromated copper arsenate treated timber waste, using oxalic acid as assisting agent. The method prowed succesfull 93% Cu, 95% Cr and 99% As was removed from the timber.......The electrodialytic process is proposed as a technique for the remediation of chromated copper arsenate treated timber waste, using oxalic acid as assisting agent. The method prowed succesfull 93% Cu, 95% Cr and 99% As was removed from the timber....

  6. Arsenate Impact on the Metabolite Profile, Production, and Arsenic Loading of Xylem Sap in Cucumbers (Cucumis sativus L.).

    Science.gov (United States)

    Uroic, M Kalle; Salaün, Pascal; Raab, Andrea; Feldmann, Jörg

    2012-01-01

    Arsenic uptake and translocation studies on xylem sap focus generally on the concentration and speciation of arsenic in the xylem. Arsenic impact on the xylem sap metabolite profile and its production during short term exposure has not been reported in detail. To investigate this, cucumbers were grown hydroponically and arsenate (As(V)) and DMA were used for plant treatment for 24 h. Total arsenic and arsenic speciation in xylem sap was analyzed including a metabolite profiling under As(V) stress. Produced xylem sap was quantified and absolute arsenic transported was determined. As(V) exposure had a significant impact on the metabolite profile of xylem sap. Four m/z values corresponding to four compounds were up-regulated, one compound down-regulated by As(V) exposure. The compound down-regulated was identified to be isoleucine. Furthermore, As(V) exposure had a significant influence on sap production, leading to a reduction of up to 96% sap production when plants were exposed to 1000 μg kg(-1) As(V). No difference to control plants was observed when plants were exposed to 1000 μg kg(-1) DMA. Absolute arsenic amount in xylem sap was the lowest at high As(V) exposure. These results show that As(V) has a significant impact on the production and metabolite profile of xylem sap. The physiological importance of isoleucine needs further attention.

  7. Conversion of agricultural residues into activated carbons for water purification: Application to arsenate removal.

    Science.gov (United States)

    Torres-Perez, Jonatan; Gerente, Claire; Andres, Yves

    2012-01-01

    The conversion of two agricultural wastes, sugar beet pulp and peanut hulls, into sustainable activated carbons is presented and their potential application for the treatment of arsenate solution is investigated. A direct and physical activation is selected as well as a simple chemical treatment of the adsorbents. The material properties, such as BET surface areas, porous volumes, elemental analysis, ash contents and pH(PZC), of these alternative carbonaceous porous materials are determined and compared with a commercial granular activated carbon. An adsorption study based on experimental kinetic and equilibrium data is conducted in a batch reactor and completed by the use of different models (intraparticle diffusion, pseudo-second-order, Langmuir and Freundlich) and by isotherms carried out in natural waters. It is thus demonstrated that sugar beet pulp and peanut hulls are good precursors to obtain activated carbons for arsenate removal.

  8. Goethite surface reactivity: III. Unifying arsenate adsorption behavior through a variable crystal face - Site density model

    Science.gov (United States)

    Salazar-Camacho, Carlos; Villalobos, Mario

    2010-04-01

    We developed a model that describes quantitatively the arsenate adsorption behavior for any goethite preparation as a function of pH and ionic strength, by using one basic surface arsenate stoichiometry, with two affinity constants. The model combines a face distribution-crystallographic site density model for goethite with tenets of the Triple Layer and CD-MUSIC surface complexation models, and is self-consistent with its adsorption behavior towards protons, electrolytes, and other ions investigated previously. Five different systems of published arsenate adsorption data were used to calibrate the model spanning a wide range of chemical conditions, which included adsorption isotherms at different pH values, and adsorption pH-edges at different As(V) loadings, both at different ionic strengths and background electrolytes. Four additional goethite-arsenate systems reported with limited characterization and adsorption data were accurately described by the model developed. The adsorption reaction proposed is: lbond2 FeOH +lbond2 SOH +AsO43-+H→lbond2 FeOAsO3[2-]…SOH+HO where lbond2 SOH is an adjacent surface site to lbond2 FeOH; with log K = 21.6 ± 0.7 when lbond2 SOH is another lbond2 FeOH, and log K = 18.75 ± 0.9, when lbond2 SOH is lbond2 Fe 2OH. An additional small contribution of a protonated complex was required to describe data at low pH and very high arsenate loadings. The model considered goethites above 80 m 2/g as ideally composed of 70% face (1 0 1) and 30% face (0 0 1), resulting in a site density for lbond2 FeOH and for lbond2 Fe 3OH of 3.125/nm 2 each. Below 80 m 2/g surface capacity increases progressively with decreasing area, which was modeled by considering a progressively increasing proportion of faces (0 1 0)/(1 0 1), because face (0 1 0) shows a much higher site density of lbond2 FeOH groups. Computation of the specific proportion of faces, and thus of the site densities for the three types of crystallographic surface groups present in

  9. Dissimilatory metabolism of nitrogen oxides in bacteria: comparative reconstruction of transcriptional networks.

    Directory of Open Access Journals (Sweden)

    2005-10-01

    Full Text Available Bacterial response to nitric oxide (NO is of major importance since NO is an obligatory intermediate of the nitrogen cycle. Transcriptional regulation of the dissimilatory nitric oxides metabolism in bacteria is diverse and involves FNR-like transcription factors HcpR, DNR, and NnrR; two-component systems NarXL and NarQP; NO-responsive activator NorR; and nitrite-sensitive repressor NsrR. Using comparative genomics approaches, we predict DNA-binding motifs for these transcriptional factors and describe corresponding regulons in available bacterial genomes. Within the FNR family of regulators, we observed a correlation of two specificity-determining amino acids and contacting bases in corresponding DNA recognition motif. Highly conserved regulon HcpR for the hybrid cluster protein and some other redox enzymes is present in diverse anaerobic bacteria, including Clostridia, Thermotogales, and delta-proteobacteria. NnrR and DNR control denitrification in alpha- and beta-proteobacteria, respectively. Sigma-54-dependent NorR regulon found in some gamma- and beta-proteobacteria contains various enzymes involved in the NO detoxification. Repressor NsrR, which was previously known to control only nitrite reductase operon in Nitrosomonas spp., appears to be the master regulator of the nitric oxides' metabolism, not only in most gamma- and beta-proteobacteria (including well-studied species such as Escherichia coli, but also in Gram-positive Bacillus and Streptomyces species. Positional analysis and comparison of regulatory regions of NO detoxification genes allows us to propose the candidate NsrR-binding motif. The most conserved member of the predicted NsrR regulon is the NO-detoxifying flavohemoglobin Hmp. In enterobacteria, the regulon also includes two nitrite-responsive loci, nipAB (hcp-hcr and nipC (dnrN, thus confirming the identity of the effector, i.e. nitrite. The proposed NsrR regulons in Neisseria and some other species are extended to include

  10. Dissimilatory metabolism of nitrogen oxides in bacteria: comparative reconstruction of transcriptional networks.

    Directory of Open Access Journals (Sweden)

    Dmitry A Rodionov

    2005-10-01

    Full Text Available Bacterial response to nitric oxide (NO is of major importance since NO is an obligatory intermediate of the nitrogen cycle. Transcriptional regulation of the dissimilatory nitric oxides metabolism in bacteria is diverse and involves FNR-like transcription factors HcpR, DNR, and NnrR; two-component systems NarXL and NarQP; NO-responsive activator NorR; and nitrite-sensitive repressor NsrR. Using comparative genomics approaches, we predict DNA-binding motifs for these transcriptional factors and describe corresponding regulons in available bacterial genomes. Within the FNR family of regulators, we observed a correlation of two specificity-determining amino acids and contacting bases in corresponding DNA recognition motif. Highly conserved regulon HcpR for the hybrid cluster protein and some other redox enzymes is present in diverse anaerobic bacteria, including Clostridia, Thermotogales, and delta-proteobacteria. NnrR and DNR control denitrification in alpha- and beta-proteobacteria, respectively. Sigma-54-dependent NorR regulon found in some gamma- and beta-proteobacteria contains various enzymes involved in the NO detoxification. Repressor NsrR, which was previously known to control only nitrite reductase operon in Nitrosomonas spp., appears to be the master regulator of the nitric oxides' metabolism, not only in most gamma- and beta-proteobacteria (including well-studied species such as Escherichia coli, but also in gram-positive Bacillus and Streptomyces species. Positional analysis and comparison of regulatory regions of NO detoxification genes allows us to propose the candidate NsrR-binding motif. The most conserved member of the predicted NsrR regulon is the NO-detoxifying flavohemoglobin Hmp. In enterobacteria, the regulon also includes two nitrite-responsive loci, nipAB (hcp-hcr and nipC (dnrN, thus confirming the identity of the effector, i.e. nitrite. The proposed NsrR regulons in Neisseria and some other species are extended to include

  11. Dissimilatory Metabolism of Nitrogen Oxides in Bacteria:Comparative Reconstruction of Transcriptional Networks

    Energy Technology Data Exchange (ETDEWEB)

    Rodionov, Dmitry A.; Dubchak, Inna L.; Arkin, Adam P.; Alm, EricJ.; Gelfand, Mikhail S.

    2005-09-01

    Bacterial response to nitric oxide (NO) is of major importance since NO is an obligatory intermediate of the nitrogen cycle. Transcriptional regulation of the dissimilatory nitric oxides metabolism in bacteria is diverse and involves FNR-like transcription factors HcpR, DNR and NnrR, two-component systems NarXL and NarQP, NO-responsive activator NorR, and nitrite sensitive repressor NsrR. Using comparative genomics approaches we predict DNA-binding signals for these transcriptional factors and describe corresponding regulons in available bacterial genomes. Within the FNR family of regulators, we observed a correlation of two specificity-determining amino acids and contacting bases in corresponding DNA signal. Highly conserved regulon HcpR for the hybrid cluster protein and some other redox enzymes is present in diverse anaerobic bacteria including Clostridia, Thermotogales and delta-proteobacteria. NnrR and DNR control denitrification in alpha- and beta-proteobacteria, respectively. Sigma-54-dependent NorR regulon found in some gamma- and beta-proteobacteria contains various enzymes involved in the NO detoxification. Repressor NsrR, which was previously known to control only nitrite reductase operon in Nitrosomonas spp., appears to be the master regulator of the nitric oxides metabolism not only in most gamma- and beta-proteobacteria (including well-studied species like Escherichia coli), but also in Gram-positive Bacillus and Streptomyces species. Positional analysis and comparison of regulatory regions of NO detoxification genes allows us to propose the candidate NsrR-binding signal. The most conserved member of the predicted NsrR regulon is the NO-detoxifying flavohemoglobin Hmp. In enterobacteria, the regulon includes also two nitrite-responsive loci, nipAB (hcp-hcr) and nipC(dnrN), thus confirming the identity of the effector, i.e., nitrite. The proposed NsrR regulons in Neisseria and some other species are extended to include denitrification genes. As the

  12. Arsenate adsorption onto hematite nanoparticles under alkaline conditions: effects of aging

    Science.gov (United States)

    Das, Soumya; Essilfie-Dughan, Joseph; Hendry, M. Jim

    2014-07-01

    Arsenate adsorption onto freshly synthesized hematite nanoparticles was carried out under highly alkaline conditions ( pH 10) at room temperature (21 °C). Dynamic light scattering measurements of hydrated hematite colloids ranged from 43 to 106 nm ( 96 %). The measured zeta potential was 28.1 mV (±5.85) suggesting that the hematite nanoparticles were moderately stable. X-ray diffraction and Raman spectroscopy data showed that hematite was stable under the conditions tested, with no crystal modification evident at the completion of the experiment (9 days). An additional band position at 826 cm-1 in the Raman spectra represented arsenate adsorbed onto hematite. The pH of the slurry dropped from 10 to 8 during the experiment; this was coincident with a drop in the aqueous concentration of arsenic (from 121 to 92 mg/L) as determined via inductively coupled plasma mass spectrometry (ICP-MS). ICP-MS analyses on the solid samples indicated a significant amount of arsenic partitioned to the solid phase during aging, corroborating the results of aqueous analyses. X-ray absorption spectroscopic analyses revealed that the bonding environment remained the same irrespective of the pH and the amount of arsenate adsorbed. Arsenate adsorbed onto hematite through a strong inner-sphere bidentate-mononuclear complex both before (0 days) and after (9 days) aging. These results are valuable for understanding the fate of potential contaminants in alkaline mine tailings environments where 2-line ferrihydrite frequently transforms to hematite rather than goethite.

  13. Removal of arsenite and arsenate using hydrous ferric oxide incorporated into naturally occurring porous diatomite.

    Science.gov (United States)

    Jang, Min; Min, Soo-Hong; Kim, Tak-Hyun; Park, Jae Kwang

    2006-03-01

    In this study, a simplified and effective method was tried to immobilize iron oxide onto a naturally occurring porous diatomite. Experimental resultsfor several physicochemical properties and arsenic edges revealed that iron oxide incorporated into diatomite was amorphous hydrous ferric oxide (HFO). Sorption trends of Fe (25%)-diatomite for both arsenite and arsenate were similar to those of HFO, reported by Dixit and Hering (Environ. Sci. Technol. 2003, 37, 4182-4189). The pH at which arsenite and arsenate are equally sorbed was 7.5, which corresponds to the value reported for HFO. Judging from the number of moles of iron incorporated into diatomite, the arsenic sorption capacities of Fe (25%)-diatomite were comparable to or higher than those of the reference HFO. Furthermore, the surface complexation modeling showed that the constants of [triple bond]SHAsO4- or [triple bond]SAsO4(2-) species for Fe (25%)-diatomite were larger than those reference values for HFO or goethite. Larger differences in constants of arsenate surface species might be attributed to aluminum hydroxyl ([triple bond]Al-OH) groups that can work better for arsenate removal. The pH-controlled differential column batch reactor (DCBR) and small-scale column tests demonstrated that Fe (25%)-diatomite had high sorption speeds and high sorption capacities compared to those of a conventional sorbent (AAFS-50) that is known to be the first preference for arsenic removal performance in Bangladesh. These results could be explained by the fact that Fe (25%)-diatomite contained well-dispersed HFO having a great affinity for arsenic species and well-developed macropores as shown by scanning electron microscopy (SEM) and pore size distribution (PSD) analyses.

  14. Changes in Simpson’s Diversity Index in Microcosms Impacted with Monosodium Methane Arsenate

    OpenAIRE

    Peter A. Kish; Nelson W. Daniel

    2009-01-01

    The objective of our studies is to analyze environmental impacts of Monosodium Methane Arsenate, MSMA, on aquatic habitats using the Aqua-Terra microcosm system. MSMA was applied at environmentally relevant(recommended) doses to microcosms to determine the change in biodiversity and the bio-concentration of arsenic in the aquatic plants (_Elodea Sp._) used in the microcosms as an oxygen source. The microcosms are filled with unfiltered pond water and the diversity of each microcosm was deter...

  15. Novel phytase from Pteris vittata resistant to arsenate, high temperature, and soil deactivation.

    Science.gov (United States)

    Lessl, Jason T; Ma, Lena Q; Rathinasabapathi, Bala; Guy, Charles

    2013-03-01

    Arsenate interferes with enzymatic processes and inhibits inorganic phosphorus (Pi) uptake in many plants. This study examined the role of phytase and phosphatase in arsenate tolerance and phosphorus (P) acquisition in the arsenic hyperaccumulator Pteris vittata . Enzyme-mediated hydrolysis of phytate in P. vittata extracts was not inhibited by arsenate at 5 mM or by heating at 100 °C for 10 min. Root exudates of P. vittata exhibited the highest phytase activity (18 nmol Pi mg(-1) protein min(-1)) when available P was low, allowing its growth on media amended with phytate as the sole source of P. Phosphorus concentration in P. vittata gametophyte tissue grown on phytate was equivalent to plants grown with inorganic phosphate at 2208 mg kg(-1), and arsenic was increased from 1777 to 2630 mg kg(-1). After 2 h of mixing with three soils, P. vittata phytase retained more activity, decreasing from ∼ 26 to ∼ 25 nmol Pi mg(-1) protein min(-1), whereas those from Pteris ensiformis and wheat decreased from ∼ 18 to ∼ 1 nmol Pi mg(-1) protein min(-1). These results suggest P. vittata has a uniquely stable phytase enabling its P acquisition in P-limiting soil environments. Furthermore, the P. vittata phytase has potential use as a soil amendment, a transgenic tool, or as a feed additive supplement, reducing the need for nonrenewable, polluting P fertilizers.

  16. Arsenate Adsorption Mechanism on Nano-ball Allophane by Langmuir Adsorption Equation

    Directory of Open Access Journals (Sweden)

    Elvis Anup Shukla

    2011-12-01

    Full Text Available Arsenic is considered as the synonym of death. High toxicity of arsenic in nature is a worldwide problem and often referred to as 20th -21st century calamity. High arsenic concentration has been reported recently from USA, China, Chile, Bangladesh, Taiwan, Mexico, Argentina, Poland, Canada, Hungry, Japan and India. Among all the countries Bangladesh and West Bengal of India are at the high risk. Thus arsenic disposal became an important task. In the present study an attempt is made to study the adsorption of toxic arsenic on allophanes.The adsorption of arsenate on a low Si/Al ratio allophane (KyP was found to be very effective in reducing the amount of arsenic below the toxic level. The examination of adsorption isotherm of arsenate on allophane by Langmuir theory indicated that arsenate adsorption increased with the increasing bulk solution concentration. The observed increase in the pH can be attributed to the ligand exchange on allophane. Aluminol groups, Al-OH or Al-OH2, on allophane are responsible for the adsorption in soil.

  17. Crystallization and preliminary crystallographic characterization of LmACR2, an arsenate/antimonate reductase from Leishmania major

    Energy Technology Data Exchange (ETDEWEB)

    Bisacchi, Davide [Bioinformatics and Structural Proteomics, IST-National Cancer Research Institute, Genova (Italy); Zhou, Yao; Rosen, Barry P.; Mukhopadhyay, Rita [Department of Biochemistry and Molecular Biology, Wayne State University School of Medicine, Detroit, Michigan (United States); Bordo, Domenico, E-mail: domenico.bordo@istge.it [Bioinformatics and Structural Proteomics, IST-National Cancer Research Institute, Genova (Italy)

    2006-10-01

    LmACR2 from L. major is the first rhodanese-like enzyme directly involved in the reduction of arsenate and antimonate to be crystallized. Diffraction data have been collected to 1.99 Å resolution using synchrotron X-rays. Arsenic is present in the biosphere owing either to the presence of pesticides and herbicides used in agricultural and industrial activities or to leaching from geological formations. The health effects of prolonged exposure to arsenic can be devastating and may lead to various forms of cancer. Antimony(V), which is chemically very similar to arsenic, is used instead in the treatment of leishmaniasis, an infection caused by the protozoan parasite Leishmania sp.; the reduction of pentavalent antimony contained in the drug Pentostam to the active trivalent form arises from the presence in the Leishmania genome of a gene, LmACR2, coding for the protein LmACR2 (14.5 kDa, 127 amino acids) that displays weak but significant sequence similarity to the catalytic domain of Cdc25 phosphatase and to rhodanese enzymes. For structural characterization, LmACR2 was overexpressed, purified to homogeneity and crystallized in a trigonal space group (P321 or P3{sub 1}21/P3{sub 2}21). The protein crystallized in two distinct trigonal crystal forms, with unit-cell parameters a = b = 111.0, c = 86.1 Å and a = b = 111.0, c = 175.6 Å, respectively. At a synchrotron beamline, the diffraction pattern extended to a resolution limit of 1.99 Å.

  18. The influence of Glyceria maxima and nitrate input on the composition and nitrate metabolism of the dissimilatory nitrate-reducing bacterial community

    NARCIS (Netherlands)

    Nijburg, J.W.; Laanbroek, H.J.

    1997-01-01

    The influence of nitrate addition and the presence of Glyceria maxima (reed sweetgrass) on the composition and nitrate metabolism of the dissimilatory nitrate-reducing bacterial community was investigated. Anoxic freshwater sediment was incubated in pots with or without G. maxima and with or without

  19. The influence of Glyceria maxima and nitrate input on the composition and nitrate metabolism of the dissimilatory nitrate-reducing bacterial community

    NARCIS (Netherlands)

    Nijburg, J.W.; Laanbroek, H.J.

    1997-01-01

    The influence of nitrate addition and the presence of Glyceria maxima (reed sweetgrass) on the composition and nitrate metabolism of the dissimilatory nitrate-reducing bacterial community was investigated. Anoxic freshwater sediment was incubated in pots with or without G. maxima and with or without

  20. Mechanism of H2S Oxidation by the Dissimilatory Perchlorate-Reducing Microorganism Azospira suillum PS.

    Science.gov (United States)

    Mehta-Kolte, Misha G; Loutey, Dana; Wang, Ouwei; Youngblut, Matthew D; Hubbard, Christopher G; Wetmore, Kelly M; Conrad, Mark E; Coates, John D

    2017-02-21

    The genetic and biochemical basis of perchlorate-dependent H2S oxidation (PSOX) was investigated in the dissimilatory perchlorate-reducing microorganism (DPRM) Azospira suillum PS (PS). Previously, it was shown that all known DPRMs innately oxidize H2S, producing elemental sulfur (S(o)). Although the process involving PSOX is thermodynamically favorable (ΔG°' = -206 kJ ⋅ mol(-1) H2S), the underlying biochemical and genetic mechanisms are currently unknown. Interestingly, H2S is preferentially utilized over physiological electron donors such as lactate or acetate although no growth benefit is obtained from the metabolism. Here, we determined that PSOX is due to a combination of enzymatic and abiotic interactions involving reactive intermediates of perchlorate respiration. Using various approaches, including barcode analysis by sequencing (Bar-seq), transcriptome sequencing (RNA-seq), and proteomics, along with targeted mutagenesis and biochemical characterization, we identified all facets of PSOX in PS. In support of our proposed model, deletion of identified upregulated PS genes traditionally known to be involved in sulfur redox cycling (e.g., Sox, sulfide:quinone reductase [SQR]) showed no defect in PSOX activity. Proteomic analysis revealed differential abundances of a variety of stress response metal efflux pumps and divalent heavy-metal transporter proteins, suggesting a general toxicity response. Furthermore, in vitro biochemical studies demonstrated direct PSOX mediated by purified perchlorate reductase (PcrAB) in the absence of other electron transfer proteins. The results of these studies support a model in which H2S oxidation is mediated by electron transport chain short-circuiting in the periplasmic space where the PcrAB directly oxidizes H2S to S(o) The biogenically formed reactive intermediates (ClO2(-) and O2) subsequently react with additional H2S, producing polysulfide and S(o) as end products.IMPORTANCE Inorganic sulfur compounds are

  1. Adsorption kinetic of arsenates as water pollutant on iron, manganese and iron-manganese-modified clinoptilolite-rich tuffs

    Energy Technology Data Exchange (ETDEWEB)

    Jimenez-Cedillo, M.J. [Instituto Nacional de Investigaciones Nucleares, Departamento de Quimica, A.P. 18-1027, Col, Escandon, Del, Miguel Hidalgo, C.P. 11801 Mexico, D.F. (Mexico); Universidad Autonoma del Estado de Mexico, Facultad de Quimica, Paseo Colon y Paseo Tollocan s/n, Toluca (Mexico); Olguin, M.T. [Instituto Nacional de Investigaciones Nucleares, Departamento de Quimica, A.P. 18-1027, Col, Escandon, Del, Miguel Hidalgo, C.P. 11801 Mexico, D.F. (Mexico)], E-mail: mog@nuclear.inin.mx; Fall, Ch. [Centro Interamericano de Recursos del Agua, CIRA, km 14.5 de la Carretera Toluca - Ixtlahuaca, Unidad San Cayetano, Estado de Mexico (Mexico)

    2009-04-30

    Arsenate adsorption from aqueous solutions onto clinoptilolite-heulandite rich tuffs modified with iron or manganese or a mixture of both iron and manganese in this work was investigated. A kinetic model was considered to describe the arsenates adsorption on each zeolitic material. The modified clinoptilolite-heulandite rich tuffs were characterized by scanning electron microscopy and X-ray diffraction analysis. The elemental composition and the specific surface area of the zeolitic material were also determined. The arsenate adsorption by the modified zeolites was carried on in a batch system considering a contact time from 5 min to 24 h for the kinetic experimentation. The arsenic was detected by atomic absorption spectrometer using a hydride generator. The kinetics of the arsenate adsorption processes were described by the pseudo-second-order model and the obtained parameter k varies from 0.15 to 5.66 {mu}g/gh. In general, the results suggested that the kinetic adsorption of arsenates on the modified clinoptilolite-rich tuffs depend of the metallic specie that modified the surface characteristics of the zeolitic material, the chemical nature of the metal as well as the association between different metallic chemical species in the zeolitic surface.

  2. Microbial reduction of iodate

    Science.gov (United States)

    Councell, T.B.; Landa, E.R.; Lovley, D.R.

    1997-01-01

    The different oxidation species of iodine have markedly different sorption properties. Hence, changes in iodine redox states can greatly affect the mobility of iodine in the environment. Although a major microbial role has been suggested in the past to account for these redox changes, little has been done to elucidate the responsible microorganisms or the mechanisms involved. In the work presented here, direct microbial reduction of iodate was demonstrated with anaerobic cell suspensions of the sulfate reducing bacterium Desulfovibrio desulfuricans which reduced 96% of an initial 100 ??M iodate to iodide at pH 7 in 30 mM NaHCO3 buffer, whereas anaerobic cell suspensions of the dissimilatory Fe(III)-reducing bacterium Shewanella putrefaciens were unable to reduce iodate in 30 mM NaHCO3 buffer (pH 7). Both D. desulfuricans and S. putrefaciens were able to reduce iodate at pH 7 in 10 mM HEPES buffer. Both soluble ferrous iron and sulfide, as well as iron monosulfide (FeS) were shown to abiologically reduce iodate to iodide. These results indicate that ferric iron and/or sulfate reducing bacteria are capable of mediating both direct, enzymatic, as well as abiotic reduction of iodate in natural anaerobic environments. These microbially mediated reactions may be important factors in the fate and transport of 129I in natural systems.

  3. Phvlogenetic diversity of dissimilatory Fe (Ⅲ) -reducing bacteria in paddy soil%水稻土中铁还原菌多样性

    Institute of Scientific and Technical Information of China (English)

    黎慧娟; 彭静静

    2011-01-01

    Microorganism-mediated dissimilatory Fe (III) reduction is recognized as the dominant mechanism for Fe(III) reduction to Fe(II) in non-sulfidogenic anaerobic environments, but the microorganisms involved, especially in paddy soil, are still poorly understood. In this paper, an enrichment culture was conducted to study the phylogenetic diversity of Fe (III) -reducing bacteria in paddy soil, with acetate or hydrogen as the electron donor and with ferrihydrite or goethite as the electron acceptor, and by the methods of terminal-restriction fragment length polymorphism ( T-RFLP) technology and 16S rRNA genes cloning and sequencing. No matter what the electron donor and electron acceptor were supplemented, the most abundant microorganisms were Geobacter and Clostridiales, and Rhodocyclaceae were also abundant, when acetate was supplemented as electron donor, which suggested that besides Geobacter, Clostridiales and Rhodocyclaceae could be also the important Fe (III)-reducing bacteria in paddy soil.%微生物介导的异化Fe(Ⅲ)还原是非硫厌氧环境中Fe (Ⅲ)还原生成Fe(Ⅱ)的主要途径,然而相关的铁还原菌还不是很清楚,特别是在水稻土中.本文采用富集培养的方法,以乙酸和氢气作为电子供体,水铁矿和针铁矿作为电子受体,通过末端限制性片段长度多态性(T-RFLP)技术和16S rRNA基因克隆测序相结合的分子生物学方法研究了水稻土中铁还原菌的多样性.结果表明:无论是以乙酸或氢气为电子供体,水铁矿或针铁矿为电子受体,地杆菌(Geobacter)和梭茵(Clostridiales)是富集到的主要微生物群落;乙酸为电子供体时,富集到的主要微生物群落还包括红环菌(Rhodocyclaceae);因此,除地杆菌外,梭菌和红环菌很可能也是水稻土中重要的铁还原菌.

  4. Dssimilatory Fe(Ⅲ) reduction characteristics of paddy soil extract cultures treated with glucose or fatty acids

    Institute of Scientific and Technical Information of China (English)

    HE Jiangzhou; QU Dong

    2008-01-01

    Dissimilatory Fe(Ⅲ) reduction is a universal process with irreplaceable biological and environmental importance in anoxic environments. Our knowledge about Fe(Ⅲ) reduction predominantly comes from pure cultures of dissimilatory Fe(Ⅲ) reducing bacteria (DFRB). The objective of this study was to compare the effects of glucose and a selection of short organic acids (citrate, succinate, pyruvate, propionate, acetate, and formate) on Fe(Ⅲ) reduction via the anaerobic culture of three paddy soil solutions with Fe(OH)3 as the sole electron acceptor. The results showed significant differences in Fe(Ⅲ) reduction among the three paddy soil solutions and suhstrate types. Bacteria from the Sichuan paddy soil responded quickly to substrate supply and showed higher Fe(Ⅲ) reducing activity than the other two soil types. Bacteria in the Jiangxi paddy soil culture solution could not use propionate as a source of electrons for Fe(Ⅲ) reduction. Similarly, bacteria in the Jilin paddy soil culture could not use succinate effectively. Pyruvate was readily used by cultures from all three paddy soil solutions, thus indicating that there were some similarities in substrate utilization by bacteria for Fe(Ⅲ) reduction. The use of glucose and citrate as substrate for dissimilatory Fe(Ⅲ) reduction indicates important ecological implications for this type of anoxic respiration.

  5. Adsorptive removal of arsenate from aqueous solutions by biochar supported zero-valent iron nanocomposite: Batch and continuous flow tests

    Energy Technology Data Exchange (ETDEWEB)

    Wang, Shengsen [Department of Agricultural and Biological Engineering, University of Florida, Gainesville, FL 32611 (United States); Gao, Bin, E-mail: bg55@ufl.edu [Department of Agricultural and Biological Engineering, University of Florida, Gainesville, FL 32611 (United States); Li, Yuncong [Tropical Research and Education Center, University of Florida, Homestead, FL 33031 (United States); Creamer, Anne Elise [Department of Agricultural and Biological Engineering, University of Florida, Gainesville, FL 32611 (United States); He, Feng [College of Biological and Environmental Engineering, Zhejiang University of Technology, Hangzhou, Zhejiang 310014 (China)

    2017-01-15

    Highlights: • Biochar supported nZVI (nZVI/BC) was synthesized. • nZVI/BC showed excellent As(V) removal efficiency in batch and CMR experiments. • 100% removal efficiency was achieved in CMRs. • Surface adsorption was the dominant removal mechanism. - Abstract: Arsenate (As(V)) removal ability by nanoscale zero-valent iron (nZVI) is compromised by aggregation of nZVI particles. In this work, pine derived biochar (PB) was used as a supporting material to stabilize nZVI for As(V) removal. The biochar supported nZVI (nZVI/BC) was synthesized by precipitating the nanoparticles on carbon surfaces. Experiments using batch and continuous flow, completely mixed reactors (CMRs) were carried out to investigate the removal of As(V) by the nZVI/BC from aqueous solutions. Batch experiments showed that nZVI/BC had high As(V) removal capacity in a wide range of pH (3–8). Kinetic data revealed that equilibrium was reached within 1 h and the isotherm data showed that the Langmuir maximum adsorption capacity of the nZVI/BC for As(V) at pH 4.1 was 124.5 g kg{sup −1}. As(V) (100 mg L{sup −1}) adsorption in anoxic condition was about 8% more than in oxic conditions, where As(V) reduction was observed in anoxic condition. The performance of the nZVI/BC in flowing condition was evaluated in CMRs at influent As(V) concentrations of 2.1 and 5.5 mg L{sup −1} and the adsorbent removed 100% and 90% of the As(V), respectively. Furthermore, the nZVI/BC composite is magnetic which facilitates collection from aqueous solutions.

  6. A QM/MM study to investigate selectivity of nanoporous graphene membrane for arsenate and chromate removal from water

    Science.gov (United States)

    Riyaz, Mohd; Goel, Neetu

    2017-10-01

    Density functional calculations have been performed within the QM/MM approach to investigate the permeability and selectivity of N-passivated nanoporous graphene towards chromate and arsenate removal from water. The passage of three target molecules namely water, arsenate and chromate from the four different sized nanoporous sheet has been elucidated in detail by treating the porous area of the sheet within the formalism of DFT, while molecular mechanics has been applied to the remaining sheet. The selectivity of the nanoporous sheet towards the passage of target molecules has been measured in terms of their diffusion energy barrier.

  7. The effect of spatial heterogeneity on nitrate reduction in soil systems

    DEFF Research Database (Denmark)

    Pedersen, Lasse Lu

    hand governed by formation by oxidation of ammonia-N, and on the other hand by removal a removal by two dissimilatory nitrate reduction processes:denitrification, in which nitrate is converted to the gaseous compounds dinitrogen and nitrous oxide, and dissimilatory nitrate reduction to ammonium, DNRA...... of reactive nitrogen from the system. On top of that nitrous oxide is an important air pollutant and greenhouse gas, with a global warming potential per unit mass 300 times higher than carbon dioxide. DNRA, on the other hand, converts nitrate to ammonium, which is more easily retained in soils than nitrate...... a fascinating scientific activity, it may very well be central to gaining insights to influence fundamental soil processes such as nitrogen metabolism, promising advancement of agricultural and pollution prevention and remediation techniques.A number of conceptual and quantitative frameworks have been developed...

  8. Effect of inorganic and organic ligands on the sorption/desorption of arsenate on/from Al-Mg and Fe-Mg layered double hydroxides

    Science.gov (United States)

    Caporale, A. G.; Pigna, M.; Dynes, J. J.; Cozzolino, V.; Zhu, J.; Violante, A.

    2012-04-01

    In recent decades, a class of anionic clays known as layered double hydroxides (LDHs) has attracted substantial attention due to the potential use in many applications, such as photochemistry, electrochemistry, polymerization, magnetization and biomedical science. There has also been considerable interest in using LDHs as adsorbents to remove environmental contaminants due to their large surface area, high anion exchange capacity and good thermal stability. We studied the sorption of arsenate on Al-Mg and Fe-Mg layered double hydroxides (easily reproducible at low-cost) as affected by pH and varying concentrations of inorganic (nitrate, nitrite, phosphate, selenite and sulphate) and organic (oxalate and tartrate) ligands, ii) the effect of residence time on the arsenate desorption by these ligands, and iii) the kinetics of arsenate desorption by phosphate. The Fe-Mg-LDH sorbed nearly twice the amount of arsenate compared to the Al-Mg-LDH, due, in part, to its greater surface area and lower degree of crystallinity. Moreover, the Fe-Mg-LDH sorbed more arsenate than phosphate, in contrast to the Al-Mg-LDH, which adsorbed more phosphate than arsenate, probably because of the greater affinity of arsenate than phosphate for Fe sites and, vice versa, the greater affinity of phosphate than arsenate for Al sites. Arsenate sorption onto samples decreased by increasing pH, due, maybe, to the high affinity of hydroxyl ions for LDHs and/or to the value of zero point charge of two sorbents. The rate of decline in the amount of arsenate sorbed was, however, relatively constant, decreasing the fastest for the Fe-Mg-LDH compared to the Al-Mg-LDH. The capacity of ligands to inhibit the fixation of arsenate followed the sequence: nitrate tartrate tartrate anions have a stronger affinity for Fe than Al and for the presence in Fe-Mg-LDH of short-range-ordered materials on which arsenate forms very strong inner-sphere complexes not easily desorbable by competing ligands. The longer the

  9. Complexation at the edges of hydrotalcite: the cases of arsenate and chromate.

    Science.gov (United States)

    Jobbágy, Matías; Regazzoni, Alberto E

    2013-03-01

    Sorption of CrO(4)(2-) and HAsO(4)(2-) by hydrotalcite, in its chloride form, was studied as a function of anion concentration. In both cases, the shape of the isotherms is langmuirian. The maximum uptake of CrO(4)(2-) equals the ion-exchange capacity of the solid, whereas sorption of HAsO(4)(2-) saturates at a higher value. Chloride ions inhibit the uptake of both anions, the amount of sorbed CrO(4)(2-) declining rapidly to zero. The uptake of HAsO(4)(2-), however, attains a constant value at high chloride concentrations. The excess of arsenate uptake follows, at constant pH, a langmuirian dependence with equilibrium concentration and decreases with increasing pH, depicting a marked change in slope at pH≈pQ(a3). CrO(4)(2-) and HAsO(4)(2-) have notable, albeit different, effects on the electrophoretic behavior of hydrotalcite; the positive particle charge is screened almost completely by CrO(4)(2-), whereas sorption of HAsO(4)(2-) produces charge reversal. These results reflect the formation of inner-sphere arsenate surface complexes at the edges of hydrotalcite particles. The underlying rationale is discussed in terms of the crystal structure of hydrotalcite surfaces.

  10. Effects of Chronic Exposure to Sodium Arsenate on Kidney of Rats

    Directory of Open Access Journals (Sweden)

    Namdar Yousofvand

    2015-09-01

    Full Text Available Background: In the present study, histopathological effects of chronic exposure to sodium arsenate in drinkable water were studied on a quantity of organs of rat. Methods: Rats were divided into two groups, group I; served as control group, were main-tained on deionized drinkable water for 2 months, and group II; the study group were given 60 g/ml of sodium arsenate in deionized drinkable water for 2 months. Blood and urine samples from two groups of animals were collected under anesthesia and the animals were sacrificed under deep anesthesia (a-chloralose, 100 mg/kg, I.P. Their kidney, liver, aorta, and heart were dissected out and cleaned of surrounding connective tissue. The organs were kept in formaldehyde (10% for histopathologic examination. Serum and urine samples from two groups were collected and analyzed for arsenic level. Total quantity of arsenic in serum and urine of animal was measured through graphic furnace atomic absorption spectrometry (GF-AAS. Results:Examination with light microscopy did not show any visible structural changes in the aorta, myocardium, and liver of chronic arsenic treated animals.However, a significant effect was observed in the kidneys of chronic arsenic treated rats showing distinct changes in proxi-mal tubular cells. There was high concentration of arsenic in serum and urine of arsenic ex-posed animals (group II significantly (P<0.001. Conclusion:Swollen tubular cells in histopathologic study of kidney may suggest toxic effects of arsenic in the body.

  11. Removing heavy metals in water: the interaction of cactus mucilage and arsenate (As (V)).

    Science.gov (United States)

    Fox, Dawn I; Pichler, Thomas; Yeh, Daniel H; Alcantar, Norma A

    2012-04-17

    High concentrations of arsenic in groundwater continue to present health threats to millions of consumers worldwide. Particularly, affected communities in the developing world need accessible technologies for arsenic removal from drinking water. We explore the application of cactus mucilage, pectic polysaccharide extracts from Opuntia ficus-indica for arsenic removal. Synthetic arsenate (As (V)) solutions were treated with two extracts, a gelling extract (GE) and a nongelling extract (NE) in batch trials. The arsenic concentration at the air-water interface was measured after equilibration. The GE and NE treated solutions showed on average 14% and 9% increases in arsenic concentration at the air-water interface respectively indicating that the mucilage bonded and transported the arsenic to the air-water interface. FTIR studies showed that the -CO groups (carboxyl and carbonyl groups) and -OH (hydroxyl) functional groups of the mucilage were involved in the interaction with the arsenate. Mucilage activity was greater in weakly basic (pH 9) and weakly acidic (pH 5.5) pH. This interaction can be optimized and harnessed for the removal of arsenic from drinking water. This work breaks the ground for the application of natural pectic materials to the removal of anionic metallic species from water.

  12. Fate of arsenite and arsenate in flooded and not flooded soils of southwest Bangladesh irrigated with arsenic contaminated water.

    Science.gov (United States)

    Martin, Maria; Violante, Antonio; Barberis, Elisabetta

    2007-10-01

    In Bangladesh and West Bengal, India, tons of arsenic are added every year to wide extensions of agricultural soils after irrigation with arsenic polluted groundwater, and the fate of the added arsenic in these water-soil environments is not yet clear. This work was aimed to investigate the accumulation and potential release of arsenite [As(III)] and arsenate [As(V)] in two adjacent soils of Bangladesh, irrigated with arsenic contaminated groundwater and cultivated under flooded or not flooded conditions. Both soils showed a scarce As accumulation, in spite of a good adsorption capacity, higher for As(III) than for As(V). The poorly ordered Fe oxides dominated As adsorption in the topsoil of the flooded soil, whereas the crystalline forms were more important in the well aerated soil. A high percentage of the native arsenic was exchangeable with phosphate and the freshly added arsenate or arsenite were even much more mobile. In our experimental conditions, the high As mobility was not dependent on the surface coverage, and, in the flooded soil, 60-70% of the freshly added arsenite or arsenate were desorbed with an infinite sink method, while in the not flooded soil arsenate was less desorbed than arsenite. Depending on their characteristics, some soils, in particular when cultivated under flooded conditions, can represent only a temporary sink for the added As, that can be easily released to waters and possibly enter the food chain from the water-soil system.

  13. Effect of weathering on chromated copper arsenate (CCA) treated wood : leaching of metal salts and change in water repellency

    Science.gov (United States)

    R. Sam Williams; Stan Lebow; Patricia Lebow

    2003-01-01

    Wood pressure-treated with chromated copper arsenate (CCA) wood preservative is commonly used for outdoor construction. Oxides of arsenic, copper, and chromium are bound in the wood by a complex series of chemical reactions, but a small percentage of these compounds are gradually released by leaching and weathering. Recent studies suggest that the release of these...

  14. Arsenic accumulation by the aquatic fern Azolla: Comparison of arsenate uptake, speciation and efflux by A. caroliniana and A. filiculoides

    Energy Technology Data Exchange (ETDEWEB)

    Zhang Xin [State Key Lab of Urban and ONAL Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, 18 Shuangqing Road, Beijing 100085 (China); Lin Aijun [Department of Environmental Science and Engineering, Beijing University of Chemical Technology, Beijing 100029 (China); Zhao Fangjie [Soil Science Department, Rothamsted Research, Hertfordshire AL5 2JQ (United Kingdom); Xu Guozhong [Agricultural Ecology Institute, Fujian Academy of Agricultural Sciences, Fuzhou 350013 (China); Duan Guilan [State Key Lab of Urban and ONAL Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, 18 Shuangqing Road, Beijing 100085 (China); Zhu Yongguan [State Key Lab of Urban and ONAL Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, 18 Shuangqing Road, Beijing 100085 (China); Institute of Urban Environment, Chinese Academy of Sciences, Xiamen 361003 (China)], E-mail: ygzhu@rcees.ac.cn

    2008-12-15

    This study investigates As accumulation and tolerance of the aquatic fern Azolla. Fifty strains of Azolla showed a large variation in As accumulation. The highest- and lowest-accumulating ferns among the 50 strains were chosen for further investigations. Azolla caroliniana accumulated two times more As than Azolla filiculoides owing to a higher influx velocity for arsenate. A. filiculoides was more resistant to external arsenate due to a lower uptake. Both strains showed a similar degree of tolerance to internal As. Arsenate and arsenite were the dominant As species in both Azolla strains, with methlyated As species accounting for <5% of the total As. A. filiculoides had a higher proportion of arsenite than A. caroliniana. Both strains effluxed more arsenate than arsenite, and the amount of As efflux was proportional to the amount of As accumulation. The potential of growing Azolla in paddy fields to reduce As transfer from soil and water to rice should be further evaluated. - Arsenic accumulation and efflux differ between strains of the aquatic fern Azolla.

  15. New low temperature synthetic route to an ammonium zinc arsenate zeolite analogue with an ABW-type structure.

    Science.gov (United States)

    Johnson, Christopher D; Macphee, Donald E; Feldmann, Jörg

    2002-07-15

    The synthesis and stability of zeolite analogues are of potential interest to the waste management community as waste metals may be used in the framework of these materials. A new synthetic route to an ABW-type ammonium zinc arsenate is proposed. The stability of this material is then examined in an aqueous environment by quantitative X-ray diffraction and leach testing.

  16. Biosynthesis of phytochelatins and arsenic accumulation in the marine microalga Phaeodactylum tricornutum in response to arsenate exposure.

    Science.gov (United States)

    Morelli, Elisabetta; Mascherpa, Marco Carlo; Scarano, Gioacchino

    2005-12-01

    The arsenate-induced synthesis of phytochelatins (PC), intracellular cysteine-rich metal-binding peptides, and its relationship with toxicity and with As accumulation in the cell have been studied in laboratory cultures of the marine microalga Phaeodactylum tricornutum. The time course of cellular PC and As in short-term exposures showed that the involvement of PC in the As detoxification as well as the pathway of cellular As depend on the extent of As accumulation and on the rate of PC synthesis. At arsenate concentrations causing As accumulation at a rate exceeding that of PC synthesis, cells seem to activate a mechanism of release of As mainly in a chemical form not complexed with PC. At arsenate concentrations at which the synthesis of PC occurs at a rate sufficient to allow a significant portion of As accumulated in the cell to be bound, the fate of cellular As seems to be mainly controlled by PC. The occurrence of these different pathways of As detoxification was discussed to explain the pattern of cellular As and PC in cells grown for three days at growth-inhibitory and at no growth-inhibitory concentration of arsenate.

  17. Assessing Metal Contamination in Lead Arsenate Contaminated Orchard Soils Using Near and Mid-Infrared Diffuse Reflectance Spectroscopy

    Science.gov (United States)

    Historic use of lead-arsenate as pesticide in apple orchards left many soils contaminated with arsenic (As) and lead (Pb). Notorious health effects and their severe soil contamination are of primary concerns for major regulatory agencies, and community at large. Wet chemistry methods for soil anal...

  18. Effects of meso-2,3-dimercaptosuccinic acid (DMSA) on the teratogenicity of sodium arsenate in mice

    Energy Technology Data Exchange (ETDEWEB)

    Bosque, M.A.; Domingo, J.L.; Llobet, J.M. (Univ. of Barcelona, Reus (Spain)); Corbella, J. (Univ. of Barcelona (Spain))

    1991-11-01

    Although the effects of arsenic on mammalian development are now well established, very few data on the protective activity of different chelators against embryotoxicity and teratogenicity of arsenic are available. Chelating agents may interact with teratogen metals to augment or ameliorate their actions. Researchers demonstrated that a single dose of 2,3-dimercaptopropanol (BAL) was capable of affording a degree of protection to arsenate exposed fetal mice. Subcutaneous treatment with 50 mg/kg of BAL 4 hr after arsenate reduced the frequency or severity of malformations compared with the effects of arsenate alone. However, BAL has several drawbacks. In recent years dimercaptosuccinic acid (DMSA) is receiving growing attention in the USA and Western Europe. Results of a number of different investigations in rodents have led to the conclusion that DMSA is much less toxic than BAL. Moreover, DMSA has been reported to be effective in inducing arsenic excretion. In the present study, the protective effects of DMSA in alleviating the embryotoxic and teratogenic effects of sodium arsenate were evaluated in mice.

  19. Embryotoxicity of arsenite and arsenate. Distribution in pregnant mice and monkeys and effects on embryonic cells in vitro

    Energy Technology Data Exchange (ETDEWEB)

    Lindgren, A.; Danielsson, R.G.; Dencker, L. (Department of Toxicology, Biomedical Center, Uppsala University, Sweden); Vahter, M. (National Institute of Environmental Medicine, Stockholm, Sweden)

    1984-01-01

    The distribution of /sup 74/As-labelled arsenate and arsenite in pregnant mice and a monkey has been studied by autoradiography and gamma counting of isolated tissues, and their in vitro toxicity to a chondrogenic system has been investigated. With both arsenic forms, given as single intravenous injections to the mother, the /sup 74/As-arsenic appeared to pass the mouse placenta relatively freely and approximately to the same extent. The retention time in material tissues including the placenta was, however, around three times longer with arsenite than with arsenate. In early gestation, high activity was registered in the embryonic neuroepithelium, which correlates well with reported CNS malformations in rodents. In late gestation, the distribution pattern was more like that in the adults. Accumulation in skin and squamous epithelia of the upper gastrointestinal tract (oral cavity, oesophagus and oesophageal region of stomach) dominated the distribution pucture, especially at a long survival interval. Arsenate, but not arsenite, showed affinity for the calcified areas of the skeleton. A marmoset monkey in late gestation receiving arsenite showed a somewhat lower rate of placental transfer than the mice. Skin and liver had the highest concentrations (at 8 hrs), both in mother and foetuses. This species is known not to methylate arsenic, resulting in stronger binding and longer retention times of arsenic as compared with other species. The stronger binding in maternal tissues may possibly explain the lower rate of placental transfer. Arsenite was shown to inhibit cartilage formation in a chick limb bud mesenchymal spot culture system (ED50 approximately 5-10..mu..M) while arsenate seemed to be without effect at concentrations up to 200 ..mu..M (highest tested). Arsenate, however, showed a potential of the arsenite toxicity.

  20. Phylogenetic analysis of bacterial and archaeal arsC gene sequences suggests an ancient, common origin for arsenate reductase

    Directory of Open Access Journals (Sweden)

    Dugas Sandra L

    2003-07-01

    Full Text Available Abstract Background The ars gene system provides arsenic resistance for a variety of microorganisms and can be chromosomal or plasmid-borne. The arsC gene, which codes for an arsenate reductase is essential for arsenate resistance and transforms arsenate into arsenite, which is extruded from the cell. A survey of GenBank shows that arsC appears to be phylogenetically widespread both in organisms with known arsenic resistance and those organisms that have been sequenced as part of whole genome projects. Results Phylogenetic analysis of aligned arsC sequences shows broad similarities to the established 16S rRNA phylogeny, with separation of bacterial, archaeal, and subsequently eukaryotic arsC genes. However, inconsistencies between arsC and 16S rRNA are apparent for some taxa. Cyanobacteria and some of the γ-Proteobacteria appear to possess arsC genes that are similar to those of Low GC Gram-positive Bacteria, and other isolated taxa possess arsC genes that would not be expected based on known evolutionary relationships. There is no clear separation of plasmid-borne and chromosomal arsC genes, although a number of the Enterobacteriales (γ-Proteobacteria possess similar plasmid-encoded arsC sequences. Conclusion The overall phylogeny of the arsenate reductases suggests a single, early origin of the arsC gene and subsequent sequence divergence to give the distinct arsC classes that exist today. Discrepancies between 16S rRNA and arsC phylogenies support the role of horizontal gene transfer (HGT in the evolution of arsenate reductases, with a number of instances of HGT early in bacterial arsC evolution. Plasmid-borne arsC genes are not monophyletic suggesting multiple cases of chromosomal-plasmid exchange and subsequent HGT. Overall, arsC phylogeny is complex and is likely the result of a number of evolutionary mechanisms.

  1. Syntheses, crystal structures and characterizations of new vanadium arsenites and arsenates

    Energy Technology Data Exchange (ETDEWEB)

    Liu Junhui [State Key Laboratory of Structural Chemistry, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences, Fuzhou 350002 (China); Graduate School of the Chinese Academy of Sciences, Beijing 100039 (China); He Zhangzhen; Kong Fang; Xu Xiang [State Key Laboratory of Structural Chemistry, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences, Fuzhou 350002 (China); Sun Chuanfu [State Key Laboratory of Structural Chemistry, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences, Fuzhou 350002 (China); Graduate School of the Chinese Academy of Sciences, Beijing 100039 (China); Mao Jianggao, E-mail: mjg@fjirsm.ac.cn [State Key Laboratory of Structural Chemistry, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences, Fuzhou 350002 (China)

    2012-08-15

    Systematic explorations in vanadium arsenites and arsenates led to the isolation four new compounds, namely, {alpha}-(V{sup IV}O){sub 3}(As{sup III}O{sub 3}){sub 2} (1), {beta}-(V{sup IV}O){sub 3}(As{sup III}O{sub 3}){sub 2} (2), (V{sup IV}O)[V{sup IV}O(H{sub 2}O)]{sub 2}(As{sup V}O{sub 4}){sub 2} (3), V{sup III}V{sup IV}O{sub 2}(As{sup V}O{sub 4}) (4). Compounds 1, 2 and 4 were synthesized by standard solid-state reactions, and compound 3 is a vanadium arsenate dihydrate synthesized through hydrothermal reactions. Compounds 1 and 2 are isomers, and they represent the first examples of ternary inorganic vanadium(IV) arsenites. Single crystal X-ray diffraction analysis indicated that the four compounds display four different structural types. Magnetic property measurements for compound 1 indicated that it exhibits ferromagnetism with the Curie temperature T{sub c}=65 K. Thermal stability and optical properties for compounds 1 and 3 were also investigated. - Graphical abstract: Hydrothermal or solid state reactions of V{sub 2}O{sub 5} (or VO{sub 2}) and As{sub 2}O{sub 3} yielded four new ternary compounds with four different types of structures, namely, {alpha}-(VO){sub 3}(AsO{sub 3}){sub 2} (1), {beta}-(VO){sub 3}(AsO{sub 3}){sub 2} (2), (VO)[VO(H{sub 2}O)]{sub 2}(AsO{sub 4}){sub 2} (3), (VO){sub 2}(AsO{sub 4}) (4). {alpha}-(VO){sub 3}(AsO{sub 3}){sub 2} (1), {beta}-(VO){sub 3}(AsO{sub 3}){sub 2} (2) represent the first examples of ternary inorganic vanadium(IV) arsenites. Highlights: Black-Right-Pointing-Pointer Hydrothermal or solid state reactions of V{sub 2}O{sub 5} (or VO{sub 2}) and As{sub 2}O{sub 3} yielded two new arsenites. Black-Right-Pointing-Pointer They represent the first examples of ternary vanadium arsenites. Black-Right-Pointing-Pointer Two new ternary vanadium arsenates were also obtained. Black-Right-Pointing-Pointer They exhibit four different structural types.

  2. Respiratory and dissimilatory nitrate-reducing communities from an extreme saline alkaline soil of the former lake Texcoco (Mexico).

    Science.gov (United States)

    Alcántara-Hernández, Rocio J; Valenzuela-Encinas, César; Marsch, Rodolfo; Dendooven, Luc

    2009-01-01

    The diversity of the dissimilatory and respiratory nitrate-reducing communities was studied in two soils of the former lake Texcoco (Mexico). Genes encoding the membrane-bound nitrate reductase (narG) and the periplasmic nitrate reductase (napA) were used as functional markers. To investigate bacterial communities containing napA and narG in saline alkaline soils of the former lake Texcoco, libraries of the two sites were constructed (soil T3 with pH 11 and electrolytic conductivity in saturated extract (EC(SE)) 160 dS m(-1) and soil T1 with pH 8.5 and EC(SE) 0.8 dS m(-1)). Phylogenetic analysis of napA sequences separated the clone families into two main groups: dependent or independent of NapB. Most of napA sequences from site T1 were grouped in the NapB-dependent clade, meanwhile most of the napA sequences from the extreme soil T3 were affiliated to the NapB-independent group. For both sites, partial narG sequences were associated with representatives of the Proteobacteria, Firmicutes and Actinobacteria phyla, but the proportions of the clones were different. Our results support the concept of a specific and complex nitrate-reducing community for each soil of the former lake Texcoco.

  3. Structure and morphology of magnetite anaerobically-produced by a marine magnetotactic bacterium and a dissimilatory iron-reducing bacterium

    Science.gov (United States)

    Sparks, N. H. C.; Mann, S.; Bazylinski, D. A.; Lovley, D. R.; Jannasch, H. W.; Frankel, R. B.

    1990-04-01

    Intracellular crystals of magnetite synthesized by cells of the magnetotactic vibroid organism, MV-1, and extracellular crystals of magnetite produced by the non-magnetotactic dissimilatory iron-reducing bacterium strain GS-15, were examined using high-resolution transmission electron microscopy, electron diffraction and 57Fe Mo¨ssbauer spectroscopy. The magnetotactic bacterium contained a single chain of approximately 10 crystals aligned along the long axis of the cell. The crystals were essentially pure stoichiometric magnetite. When viewed along the crystal long axis the particles had a hexagonal cross-section whereas side-on they appeared as rectangules or truncated rectangles of average dimension, 53 × 35 nm. These findings are explained in terms of a three-dimensional morphology comprising a hexagonal prism of 110 faces which are capped and truncated by 111 end faces. Electron diffraction and lattice imaging studies indicated that the particles were structurally well-defined single crystals. In contrast, magnetite particles produced by the strain, GS-15 were irregular in shape and had smaller mean dimensions (14 nm). Single crystals were imaged but these were not of high structural perfection. These results highlight the influence of intracellular control on the crystallochemical specificity of bacterial magnetites. The characterization of these crystals is important in aiding the identification of biogenic magnetic materials in paleomagnetism and in studies of sediment magnetization.

  4. Characterization of adsorption of aqueous arsenite and arsenate onto charred dolomite in microcolumn systems.

    Science.gov (United States)

    Salameh, Yousef; Al-Muhtaseb, Ala'a H; Mousa, Hasan; Walker, Gavin M; Ahmad, Mohammad N M

    2014-01-01

    In this work, the removal of arsenite, As(III), and arsenate, As(V), from aqueous solutions onto thermally processed dolomite (charred dolomite) via microcolumn was evaluated. The effects of mass of adsorbent (0.5-2 g), initial arsenic concentration (50-2000 ppb) and particle size (dolomite in a microcolumn were investigated. It was found that the adsorption of As(V) and As(III) onto charred dolomite exhibited a characteristic 'S' shape. The adsorption capacity increased as the initial arsenic concentration increased. A slow decrease in the column adsorption capacity was noted as the particle size increased from>0.335 to 0.710-2.00 mm. For the binary system, the experimental data show that the adsorption of As(V) and As(III) was independent of both ions in solution. The experimental data obtained from the adsorption process were successfully correlated with the Thomas Model and Bed Depth Service Time Model.

  5. Arsenic immobilization as alunite-type phases: The arsenate substitution in alunite and hydronium alunite

    Energy Technology Data Exchange (ETDEWEB)

    Sunyer, Alba, E-mail: asunyer@ub.edu; Currubí, Marta, E-mail: mcurruvi7@alumnes.ub.edu; Viñals, Joan, E-mail: jvinalsvinals@ub.edu

    2013-10-15

    Highlights: • Arsenic inertization/stabilization through alunite phases. • Arsenate incorporation in alunite structure: c cell expansion with arsenate incorporation. • Low arsenic solubility from arsenical alunite in short-term stability tests a neutral pH. • Long-term good stability of arsenical alunite. -- Abstract: AsO{sub 4}-for-SO{sub 4} substitution in alunite (KAl{sub 3}(SO{sub 4}){sub 2}(OH){sub 6}) and hydronium alunite ((H{sub 3}O)Al{sub 3}(SO{sub 4}){sub 2}(OH){sub 6}) has been investigated by hydrothermal precipitation at 200 °C. Arsenical alunite presented a good precipitation yield and a significant AsO{sub 4} substitution (up to 15% molar). The degree of arsenate substitution depends on the solution composition. It increased as (AsO{sub 4}/(AsO{sub 4} + SO{sub 4})){sub alunite} ≅ 0.5 (AsO{sub 4}/(AsO{sub 4} + SO{sub 4})){sub L}. For (AsO{sub 4}/(AsO{sub 4} + SO{sub 4})){sub L} < 0.26, arsenical alunite was the unique phase and, above this ratio, mansfieldite (AlAsO{sub 4}·2H{sub 2}O) co-precipitated. The a unit cell parameter is practically independent of the AsO{sub 4} substitution, but the c unit cell parameter increased consistently with the differences between the As-O1 and S-O1 distances in tetrahedral sites of the structure. The maximum stability of arsenical alunite in short-term tests is between pH 5 and 8, with an As-solubilization of 0.01–0.03 mg/L in 24 h. Long-term tests were performed at some synthesized samples at its natural pH. Arsenical alunite was stabilized at 0.3 mg/L released As in 2.5 weeks. These values were similar to those obtained in pure and largely crystalline natural scorodite (0.4 mg/L released As), but lower than the obtained for synthetic scorodite (1.3 mg/L released As). Thus, arsenical alunite could be effective for arsenic immobilization, especially for effluents or wastes containing large SO{sub 4}/AsO{sub 4} ratio. Hydronium alunite presents a low precipitation yield and a very low arsenate

  6. Rice–arsenate interactions in hydroponics: a three-gene model for tolerance

    Science.gov (United States)

    Norton, Gareth J.; Nigar, Meher; Dasgupta, Tapash; Meharg, Andrew A.; Price, Adam H.

    2008-01-01

    In this study, the genetic mapping of the tolerance of root growth to 13.3 μM arsenate [As(V)] using the Bala×Azucena population is improved, and candidate genes for further study are identified. A remarkable three-gene model of tolerance is advanced, which appears to involve epistatic interaction between three major genes, two on chromosome 6 and one on chromosome 10. Any combination of two of these genes inherited from the tolerant parent leads to the plant having tolerance. Lists of potential positional candidate genes are presented. These are then refined using whole genome transcriptomics data and bioinformatics. Physiological evidence is also provided that genes related to phosphate transport are unlikely to be behind the genetic loci conferring tolerance. These results offer testable hypotheses for genes related to As(V) tolerance that might offer strategies for mitigating arsenic (As) accumulation in consumed rice. PMID:18453529

  7. Rice-arsenate interactions in hydroponics: a three-gene model for tolerance.

    Science.gov (United States)

    Norton, Gareth J; Nigar, Meher; Williams, Paul N; Dasgupta, Tapash; Meharg, Andrew A; Price, Adam H

    2008-01-01

    In this study, the genetic mapping of the tolerance of root growth to 13.3 muM arsenate [As(V)] using the BalaxAzucena population is improved, and candidate genes for further study are identified. A remarkable three-gene model of tolerance is advanced, which appears to involve epistatic interaction between three major genes, two on chromosome 6 and one on chromosome 10. Any combination of two of these genes inherited from the tolerant parent leads to the plant having tolerance. Lists of potential positional candidate genes are presented. These are then refined using whole genome transcriptomics data and bioinformatics. Physiological evidence is also provided that genes related to phosphate transport are unlikely to be behind the genetic loci conferring tolerance. These results offer testable hypotheses for genes related to As(V) tolerance that might offer strategies for mitigating arsenic (As) accumulation in consumed rice.

  8. Arsenate sorption by hydrous ferric oxide incorporated onto granular activated carbon with phenol formaldehyde resins coating.

    Science.gov (United States)

    Zhuang, J M; Hobenshield, E; Walsh, T

    2008-04-01

    A simple and effective method was developed using phenol formaldehyde (PF) resins to immobilize hydrous ferric oxide (HFO) onto granular activated carbon (GAC). The resulting sorbent possesses advantages for both the ferric oxide and the GAC, such as a great As-affinity of ferric oxide, large surface area of GAC, and enhanced physical strength. The studies showed that within one hour this sorbent was able to remove 85% of As(V) from water containing an initial As(V) concentration of 1.74 mg l(-1). The As(V) adsorption onto the sorbent was found to follow a pseudo-second order kinetics model. The adsorption isotherms were interpreted in terms of the Langmuir and Freundlich models. The equilibrium data fitted very well to both models. Column tests showed that this sorbent was able to achieve residual concentrations of As(V) in a range of 0.1-2.0 microg l(-1) while continuously treating about 180 bed volume (BV, 130 ml-BV) of arsenate water with an initial As(V) concentration of 1886 microg l(-1) at a filtration rate of 13.5 ml min(-1), i.e., an empty bed contact time (EBCT) of 9.6 min and a gram sorbent contact time (GSCT) of 0.15 min. After passing 635 BV of arsenate water, the exhausted sorbent was then tested by the Toxicity Characteristic Leaching Procedure (TCLP, US EPA Method 1311) test, and classified as non-hazardous for disposal. Hence, this HFO-PF-coated GAC has the capability to remove As(V) from industrial wastewater containing As(V) levels of about 2 mg l(-1).

  9. Can arsenates replace phosphates in natural biochemical processes? A computational study.

    Science.gov (United States)

    Jissy, A K; Datta, Ayan

    2013-07-18

    A bacterial strain, GFAJ-1 was recently proposed to be substituting arsenic for phosphorus to sustain its growth. We have performed theoretical calculations for analyzing this controversial hypothesis by examining the addition of phosphate to ribose and glucose. Dispersion corrected Density Functional Theory (DFT) calculations in small molecules and QM/MM calculations on clusters derived from crystal structure are performed on structures involved in phosphorylation, considering both phosphates and arsenates. The exothermicity as well as the activation barriers for phosphate and arsenate transfer were examined. Quantum mechanical studies reveal that the relative stability of the products decrease marginally with successive substitution of P with As. However, simultaneously, the transition state barriers decrease with P replacement. This indicates that, kinetically, addition of As is more facile. Pseudorotation barriers for the pentavalent intermediates formed during the nucleophilic attack are also analyzed. A monotonic increase in barriers is observed for pseudorotation with the successive replacement of phosphorus with arsenic in methyl-DHP. A glucokinase crystal structure was chosen to construct a model system for QM/MM calculations. Free energy of the reaction (ΔG) reduces by less than 2.0 kcal/mol and the activation barrier (ΔG(‡)) decreases by ∼1 kcal/mol on arsenic incorporation. Thus, both DFT and QM/MM calculations show that arsenic can readily substitute phosphorus in key biomolecules. Secondary kinetic isotope effects for phosphorylation mechanism obtained by QM/MM calculations are also reported. The solvent kinetic isotopic effects (SKIE) for ATP and ATP (As) are calculated to be 5.81 and 4.73, respectively. A difference of ∼1.0 in SKIE suggests that it should be possible to experimentally determine the As-phosphorylation process.

  10. Investigation of biochemical responses of Bacopa monnieri L. upon exposure to arsenate.

    Science.gov (United States)

    Mishra, Seema; Srivastava, Sudhakar; Dwivedi, Sanjay; Tripathi, Rudra Deo

    2013-08-01

    Widespread contamination of arsenic (As) is recognized as a global problem due to its well-known accumulation by edible and medicinal plants and associated health risks for the humans. In this study, phytotoxicity imposed upon exposure to arsenate [As(V); 0-250 μM for 1-7 days] and ensuing biochemical responses were investigated in a medicinal herb Bacopa monnieri L. vis-à-vis As accumulation. Plants accumulated substantial amount of As (total 768 μg g(-1) dw at 250 μM As(V) after 7 days) with the maximum As retention being in roots (60%) followed by stem (23%) and leaves (17%). The level of cysteine and total nonprotein thiols (NP-SH) increased significantly at all exposure concentrations and durations. Besides, the level of metalloid binding ligands viz., glutathione (GSH) and phytochelatins (PCs) increased significantly at the studied concentrations [50 and 250 μM As(V)] in both roots and leaves. The activities of various enzymes viz., arsenate reductase (AR), glutathione reductase (GR), superoxide dismutase (SOD), guaiacol peroxidase (GPX), ascorbate peroxidase (APX), and catalase (CAT) showed differential but coordinated stimulation in leaves and roots to help plants combat As toxicity up to moderate exposure concentrations (50 μM). However, beyond 50 μM, biomass production was found to decrease along with photosynthetic pigments and total soluble proteins, whereas lipid peroxidation increased. In conclusion, As accumulation potential of Bacopa may warrant its use as a phytoremediator but if Bacopa growing in contaminated areas is consumed by humans, it may prove to be toxic for health.

  11. Dissimilatory sulfur cycling in oxygen minimum zones: an emerging metagenomics perspective.

    Science.gov (United States)

    Stewart, Frank J

    2011-12-01

    Biological diversity in marine OMZs (oxygen minimum zones) is dominated by a complex community of bacteria and archaea whose anaerobic metabolisms mediate key steps in global nitrogen and carbon cycles. Molecular and physiological studies now confirm that OMZs also support diverse micro-organisms capable of utilizing inorganic sulfur compounds for energy metabolism. The present review focuses specifically on recent metagenomic data that have helped to identify the molecular basis for autotrophic sulfur oxidation with nitrate in the OMZ water column, as well as a cryptic role for heterotrophic sulfate reduction. Interpreted alongside marker gene surveys and process rate measurements, these data suggest an active sulfur cycle with potentially substantial roles in organic carbon input and mineralization and critical links to the OMZ nitrogen cycle. Furthermore, these studies have created a framework for comparing the genomic diversity and ecology of pelagic sulfur-metabolizing communities from diverse low-oxygen regions.

  12. Effect of glycine substitution on the ferroelectric phase of betaine arsenate [(CH 3) 3NCH 2COO·H 3AsO 4

    Science.gov (United States)

    Dekola, T.; Ribeiro, J. L.; Klöpperpieper, A.

    2011-09-01

    The present work reports an experimental investigation on the influence of glycine (NH 2CH 2COOH) substitution in the polar properties and the critical dynamics of the molecular ferroelectric betaine arsenate, (CH 3) 3NCH 2COO·H 3AsO 4. The dielectric dispersion (20 Hzbetaine arsenate and discussed within the scope of a phenomenological Landau model previously used to describe a system with competing ferroelectric and structural instabilities.

  13. The removal of sulphate from mine water by precipitation as ettringite and the utilisation of the precipitate as a sorbent for arsenate removal.

    Science.gov (United States)

    Tolonen, Emma-Tuulia; Hu, Tao; Rämö, Jaakko; Lassi, Ulla

    2016-10-01

    The aim of this research was to investigate sulphate removal from mine water by precipitation as ettringite (Ca6Al2(SO4)3(OH)12·26H2O) and the utilisation of the precipitate as a sorbent for arsenate removal. The mine water sulphate concentration was reduced by 85-90% from the initial 1400 mg/L during ettringite precipitation depending on the treatment method. The precipitation conditions were also simulated with MINEQL + software, and the computational results were compared with the experimental results. The precipitated solids were characterised with X-ray diffraction and a scanning electron microscope. The precipitated solids were tested as sorbents for arsenate removal from the model solution. The arsenic(V) model solution concentration reduced 86-96% from the initial 1.5 mg/L with a 1 g/L sorbent dosage. The effect of initial arsenate concentration on the sorption of arsenate on the precipitate was studied and Langmuir, Freundlich, and Langmuir-Freundlich sorption isotherm models were fitted to the experimental data. The maximum arsenate sorption capacity (qm = 11.2 ± 4.7 mg/g) of the precipitate was obtained from the Langmuir-Freundlich isotherm. The results indicate that the precipitate produced during sulphate removal from mine water by precipitation as ettringite could be further used as a sorbent for arsenate removal.

  14. Quantification of the effects of organic and carbonate buffers on arsenate and phosphate adsorption on a goethite-based granular porous adsorbent.

    Science.gov (United States)

    Kanematsu, Masakazu; Young, Thomas M; Fukushi, Keisuke; Sverjensky, Dimitri A; Green, Peter G; Darby, Jeannie L

    2011-01-15

    Interest in the development of oxide-based materials for arsenate removal has led to a variety of experimental methods and conditions for determining arsenate adsorption isotherms, which hinders comparative evaluation of their adsorptive capacities. Here, we systematically investigate the effects of buffer (HEPES or carbonate), adsorbent dose, and solution pH on arsenate and phosphate adsorption isotherms for a previously well characterized goethite-based adsorbent (Bayoxide E33 (E33)). All adsorption isotherms obtained at different adsorbate/adsorbent concentrations were identical when 1 mM of HEPES (96 mg C/L) was used as a buffer. At low aqueous arsenate and phosphate concentration (∼1.3 μM), however, adsorption isotherms obtained using 10 mM of NaHCO(3) buffer, which is a reasonable carbonate concentration in groundwater, are significantly different from those obtained without buffer or with HEPES. The carbonate competitive effects were analyzed using the extended triple layer model (ETLM) with the adsorption equilibrium constant of carbonate calibrated using independent published carbonate adsorption data for pure goethite taking into consideration the different surface properties. The successful ETLM calculations of arsenate adsorption isotherms for E33 under various conditions allowed quantitative comparison of the arsenate adsorption capacity between E33 and other major adsorbents initially tested under varied experimental conditions in the literature.

  15. Microbial Selenite Reduction and the Selenium Biogeochemical Cycle

    Science.gov (United States)

    Stolz, J. F.; Wells, M.

    2016-12-01

    Selenium is an essential trace element utilized by many species in the three domains of life. In most Bacteria and Archaea, selenium is primarily assimilated to form selenocysteine, the 21st amino acid (Sec). Additionally selenium can be methylated, demethylated, or used as a terminal electron acceptor in dissimilatory selenate or selenite reduction. Although progress has been made on elucidating the synthesis of selenoproteins, less is known of their occurrence, diversity, and functionality, primarily due to poor genome annotation (e.g., failure to recognize UGA as a Sec and not a stop codon) and proteomics analysis (e.g., failure to detect Sec in LC/MS-MS). Furthermore important parts of the selenium biogeochemical cycle remain to be fully explored, in particular the reduction of Se(IV) to Se(O). We have examined the selenoproteome of a selenate respiring bacterium Sulfurospirillum barnesii strain SES-3, which reduces Se(VI) to Se(0) and the dissimilatory selenite reducing bacterium, Bacillus selenitireducens, strain MLS-10, which reduces Se(IV) to Se(0). Candidate selenoproteins including D-proline reductase, formate dehydrogenase, and methionine-S sulfoxide reductase have been identified in the genomes. A putative dissimilatory selenate reducase (Ser) was found in the genome of S. barnesii. More significant was the discovery of a candidate for the respiratory selenite reductase in B. selenitireducens as determined by in gel assays and LC/MS-MS. The latter has provided a hint at the potential diversity of DSiR bacteria and the development of molecular probes for investigating DSiR in the selenium biogeochemical cycle.

  16. Pyrobaculum Yellowstonensis Strain WP30 Respires On Elemental Sulfur And/or Arsenate in Circumneutral Sulfidic Sediments of Yellowstone National Park

    Energy Technology Data Exchange (ETDEWEB)

    Jay, Z.; Beam, Jake; Dohnalkova, Alice; Lohmayer, R.; Bodle, B.; Planer-Friedrich, B.; Romine, Margaret F.; Inskeep, William

    2015-09-15

    Thermoproteales populations (phylum Crenarchaeota) are abundant in high-25 temperature (>70° C) environments of Yellowstone National Park (YNP) and are important in mediating biogeochemical cycles of sulfur, arsenic and carbon. The objectives of this study were to determine specific physiological attributes of the isolate Pyrobaculum yellowstonensis strain WP30, which was obtained from an elemental sulfur sediment (Joseph’s Coat Hot Spring [JCHS]; 80 °C; pH 6.1), and relate this organism to geochemical processes occurring in situ. Strain WP30 is a chemoheterotroph that utilizes organic carbon as a source of carbon and electrons and requires elemental sulfur and/or arsenic as electron acceptors. Growth in the presence of elemental sulfur and arsenate resulted in the production of thioarsenates and polysulfides relative to sterile controls. The complete genome of this organism was sequenced (1.99 Mb, 58 % G+C) and revealed numerous metabolic pathways for the degradation of carbohydrates, amino acids and lipids, multiple dimethylsulfoxide molybdopterin (DMSO-MPT) oxidoreductase genes, which are implicated in the reduction of sulfur and arsenic, and pathways for the de novo synthesis of nearly all required cofactors and metabolites. Comparative genomics of P. yellowstonensis versus assembled metagenome sequence from JCHS showed that this organisms is highly-related (~95% average nucleotide identity) to in situ populations. The physiological attributes and metabolic capabilities of P. yellowstonensis provide importanat information towards understanding the distribution and function of these populations in YNP.

  17. Sulphate and arsenate minerals as environmental indicators in the weathering zones of selected ore deposits, Western Sudetes, Poland

    Science.gov (United States)

    Parafiniuk, Jan; Siuda, Rafał; Borkowski, Andrzej

    2016-09-01

    The results of a complex investigation of the sulphate and arsenate assemblages forming in the weathering zone of selected ore deposits in the Sudetes are presented. The development of the weathering zone has been characterised in the polymetallic ore deposits at Miedzianka-Ciechanowice and Radzimowice, and the pyrite deposit at Wieściszowice, which differ in the chemical compositions of the ore and barren minerals and the hydrological conditions. Secondary sulphate and arsenate mineral assemblages vary significantly among the ore deposits under study. Their crystallization is discussed, taking into consideration the stability of particular minerals and the paths of their transformation. It is shown that these minerals have great potential as indicators of weathering processes. A significant role for microorganisms in the formation of the weathering zone of the ore deposits under study is also proven.

  18. Genetic identification of arsenate reductase and arsenite oxidase in redox transformations carried out by arsenic metabolising prokaryotes - A comprehensive review.

    Science.gov (United States)

    Kumari, Nisha; Jagadevan, Sheeja

    2016-11-01

    Arsenic (As) contamination in water is a cause of major concern to human population worldwide, especially in Bangladesh and West Bengal, India. Arsenite (As(III)) and arsenate (As(V)) are the two common forms in which arsenic exists in soil and groundwater, the former being more mobile and toxic. A large number of arsenic metabolising microorganisms play a crucial role in microbial transformation of arsenic between its different states, thus playing a key role in remediation of arsenic contaminated water. This review focuses on advances in biochemical, molecular and genomic developments in the field of arsenic metabolising bacteria - covering recent developments in the understanding of structure of arsenate reductase and arsenite oxidase enzymes, their gene and operon structures and their mechanism of action. The genetic and molecular studies of these microbes and their proteins may lead to evolution of successful strategies for effective implementation of bioremediation programs. Copyright © 2016 Elsevier Ltd. All rights reserved.

  19. Understanding the role of multiheme cytochromes in iron(III) reduction and arsenic mobilization by Shewanella sp. ANA-3

    Science.gov (United States)

    Reyes, C.; Duenas, R.; Saltikov, C.

    2006-12-01

    The reduction of Fe (III) to Fe (II) and of arsenate (As (V)) to arsenite (As (III)) by Fe (III) reducing and As (V) respiring prokaryotes such as the bacterium Shewanella sp. ANA-3 may contribute to arsenic mobilization in aquifers contaminated with arsenic, specifically in places such as Bangladesh. Under oxic conditions As (V) predominates and is often adsorbed onto mineral surfaces such as amorphous ferrihydrite. However, under anoxic conditions As (III) predominates, sorbs to fewer minerals, and has a greater hydrologic mobility compared to As (V). The genetic mechanism underlying arsenic release from subsurface material most likely involves a combination of respiratory gene clusters (e.g. mtr/omc and arr). In this study, we are investigating the genetic pathways underlying arsenic mobilization. We have generated various mutations in the mtr/omc gene cluster, which encodes several outermembrane decaheme c-type cytochromes. Deletions in one mtr/omc gene did not eliminate iron reduction. However, strains carrying multiple gene deletions were greatly impaired in iron reduction abilities. Work is currently underway to generate combinations of iron reduction and arsenate reduction single and double mutants that will be used to investigate microbial mobilization of arsenic in flow-through columns containing As (V)-HFO coated sand. This work will address the importance of arsenate reduction and iron reduction in the mobilization of arsenic.

  20. Different arsenate and phosphate incorporation effects on the nucleation and growth of iron(III) (Hydr)oxides on quartz.

    Science.gov (United States)

    Neil, Chelsea W; Lee, Byeongdu; Jun, Young-Shin

    2014-10-21

    Iron(III) (hydr)oxides play an important role in the geochemical cycling of contaminants in natural and engineered aquatic systems. The ability of iron(III) (hydr)oxides to immobilize contaminants can be related to whether the precipitates form heterogeneously (e.g., at mineral surfaces) or homogeneously in solution. Utilizing grazing incidence small-angle X-ray scattering (GISAXS), we studied heterogeneous iron(III) (hydr)oxide nucleation and growth on quartz substrates for systems containing arsenate and phosphate anions. For the iron(III) only system, the radius of gyration (Rg) of heterogeneously formed precipitates grew from 1.5 to 2.5 (± 1.0) nm within 1 h. For the system containing 10(-5) M arsenate, Rg grew from 3.6 to 6.1 (± 0.5) nm, and for the system containing 10(-5) M phosphate, Rg grew from 2.0 to 4.0 (± 0.2) nm. While the systems containing these oxyanions had more growth, the system containing only iron(III) had the most nucleation events on substrates. Ex situ analyses of homogeneously and heterogeneously formed precipitates indicated that precipitates in the arsenate system had the highest water content and that oxyanions may bridge iron(III) hydroxide polymeric embryos to form a structure similar to ferric arsenate or ferric phosphate. These new findings are important because differences in nucleation and growth rates and particle sizes will impact the number of available reactive sites and the reactivity of newly formed particles toward aqueous contaminants.

  1. Rapid microwave-assisted acid extraction of southern pine waste wood to remove metals from chromated copper arsenate (CCA) treatment

    Science.gov (United States)

    Chung-Yun Hse; Todd F. Shupe; Bin Yu

    2013-01-01

    Recovery of metals from chromated copper arsenate (CCA)-treated southern pine wood particles was investigated by extraction in a microwave reactor with binary combinations of acetic acid (AA), oxalic acid (OxA), and phosphoric acid (PhA). Use of OxA was not successful, as insoluble copper oxalate complexes impeded copper removal. The combination of OxA and AA also had...

  2. Embryotoxicity of arsenite and arsenate. Distribution in pregnant mice and monkeys and effects on embryonic cells in vitro

    Energy Technology Data Exchange (ETDEWEB)

    Lindgren, A.; Danielsson, R.G.; Dencker, L. (Department of Toxicology, Biomedical Center, Uppsala University, Sweden); Vahter, M. (National Institute of Environmental Medicine, Stockholm, Sweden)

    1984-01-01

    The distribution of /sup 74/As-labelled and arsenite in pregnant mice and a monkey has been studied by autoradiography and gamma counting of isolated tissues, and their in vitro toxicity to a chondrogenic system has been investigated. With both arsenic forms, given as single intravenous injections to the mother, the /sup 74/As-arsenic appeared to pass the mouse placenta relatively freely and approximately to the same extent. The retention time in material tissues including the placenta was, however, around three times longer with arsenite than with arsenate. In early gestation, high activity was registered in the embryonic neuroepithelium, which correlates well with reported CNS malformations in rodents. In late gestation, the distribution pattern was more like that in the adults. Accumulation in skin and squamous epithelia of the upper gastrointestinal tract (oral cavity, oesophagus and oesophageal region of stomach) dominated the distribution picture, especially at a long survival interval. Arsenate, but not arsenite, showed affinity for the calcified areas of the skeleton. A marmoset monkey in late gestation receiving arsenite showed a somewhat lower rate of placental transfer than the mice. Skin and liver had the highest concentrations (at 8 hrs), both in mother and foetuses. This species is known not to methylate arsenic, resulting in stronger binding and longer retention times of arsenic as compared with other species. The stronger binding in maternal tissues may possibly explain the lower rate of placental transfer. Arsenite was shown to inhibit cartilage formation in a chick limb bud mesenchymal spot culture system (ED50 approximately 5-10..mu..M) while arsenate seemed to be without effect at concentrations up to 200 ..mu..M (highest tested). Arsenate, however, showed a potential of the arsenite toxicity.

  3. The removal of arsenate from water using iron-modified diatomite (D-Fe): isotherm and column experiments.

    Science.gov (United States)

    Pantoja, M L; Jones, H; Garelick, H; Mohamedbakr, H G; Burkitbayev, M

    2014-01-01

    Iron hydroxide supported onto porous diatomite (D-Fe) is a low-cost material with potential to remove arsenic from contaminated water due to its affinity for the arsenate ion. This affinity was tested under varying conditions of pH, contact time, iron content in D-Fe and the presence of competitive ions, silicate and phosphate. Batch and column experiments were conducted to derive adsorption isotherms and breakthrough behaviours (50 μg L(-1)) for an initial concentration of 1,000 μg L(-1). Maximum capacity at pH 4 and 17% iron was 18.12-40.82 mg of arsenic/g of D-Fe and at pH 4 and 10% iron was 18.48-29.07 mg of arsenic/g of D-Fe. Adsorption decreased in the presence of phosphate and silicate ions. The difference in column adsorption behaviour between 10% and 17% iron was very pronounced, outweighing the impact of all other measured parameters. There was insufficient evidence of a correlation between iron content and arsenic content in isotherm experiments, suggesting that ion exchange is a negligible process occurring in arsenate adsorption using D-Fe nor is there co-precipitation of arsenate by rising iron content of the solute above saturation.

  4. Arsenic mobility controlled by solid calcium arsenates: a case study in Mexico showcasing a potentially widespread environmental problem.

    Science.gov (United States)

    Martínez-Villegas, Nadia; Briones-Gallardo, Roberto; Ramos-Leal, José A; Avalos-Borja, Miguel; Castañón-Sandoval, Alan D; Razo-Flores, Elías; Villalobos, Mario

    2013-05-01

    An As-contaminated perched aquifer under an urban area affected by mining was studied over a year to determine the contamination source species and the mechanism of As mobilization. Results show that the dissolution of calcium arsenates in residues disposed on an inactive smelter has caused high levels of As pollution in the adjoining downgradient 6-km perched aquifer, reaching up to 158 mg/L of dissolved As, and releasing a total of ca. 7.5 tons of As in a year. Furthermore, free calcium ion availability was found to control As mobility in the aquifer through the diagenetic precipitation of calcium arsenates (Ca5H2(AsO4)4·cH2O) preventing further mobilization of As. Results shown here represent a model for understanding a highly underreported mechanism of retention of arsenate species likely to dominate in calcium-rich environments, such as those in calcareous sediments and soils, where the commonly reported mechanism of adsorption to iron(III) oxyhydroxides is not the dominant process. Copyright © 2013 Elsevier Ltd. All rights reserved.

  5. Arsenate tolerance mechanism of Oenothera odorata from a mine population involves the induction of phytochelatins in roots.

    Science.gov (United States)

    Kim, Dae-Yeon; Park, Hyun; Lee, Sang-Hwan; Koo, Namin; Kim, Jeong-Gyu

    2009-04-01

    We investigated the arsenate tolerance mechanisms of Oenothera odorata by comparing two populations [i.e., one population from the mine site (MP) and the other population from an uncontaminated site (UP)] via the exposure of hydroponic solution containing arsenate (i.e., 0-50 microM). The MP plants were significantly more tolerant to arsenate than UP plants. The UP plants accumulated more As in their shoots and roots than did the MP plants. The UP plants translocated up to 21 microg g(-1) of As into shoots, whereas MP plants translocated less As (up to 4.5 microg g(-1)) to shoots over all treatments. The results of lipid peroxidation indicated that MP plants were less damaged by oxidative stress than were UP plants. Phytochelatin (PC) content correlated linearly with root As concentration in the MP (i.e., [PCs](root)=1.69x[As](root), r(2)=0.945) and UP (i.e., [PCs](root)=0.89x[As](root), r(2)=0.979) plants. This relationship means that increased PC to As ratio may be associated with increased tolerance. Our results suggest that PC induction in roots plays a critical role in As tolerance of O. odorata.

  6. Removal of toxic ions (chromate, arsenate, and perchlorate) using reverse osmosis, nanofiltration, and ultrafiltration membranes

    KAUST Repository

    Yoon, Jaekyung

    2009-09-01

    Rejection characteristics of chromate, arsenate, and perchlorate were examined for one reverse osmosis (RO, LFC-1), two nanofiltration (NF, ESNA, and MX07), and one ultrafiltration (UF and GM) membranes that are commercially available. A bench-scale cross-flow flat-sheet filtration system was employed to determine the toxic ion rejection and the membrane flux. Both model and natural waters were used to prepare chromate, arsenate, and perchlorate solutions (approximately 100 μg L-1 for each anion) in mixtures in the presence of other salts (KCl, K2SO4, and CaCl2); and at varying pH conditions (4, 6, 8, and 10) and solution conductivities (30, 60, and 115 mS m-1). The rejection of target ions by the membranes increases with increasing solution pH due to the increasingly negative membrane charge with synthetic model waters. Cr(VI), As(V), and ClO4 - rejection follows the order LFC-1 (>90%) > MX07 (25-95%) ≅ ESNA (30-90%) > GM (3-47%) at all pH conditions. In contrast, the rejection of target ions by the membranes decreases with increasing solution conductivity due to the decreasingly negative membrane charge. Cr(VI), As(V), and ClO4 - rejection follows the order CaCl2 < KCl ≅ K2SO4 at constant pH and conductivity conditions for the NF and UF membranes tested. For natural waters the LFC-1 RO membrane with a small pore size (0.34 nm) had a significantly greater rejection for those target anions (>90%) excluding NO3 - (71-74%) than the ESNA NF membrane (11-56%) with a relatively large pore size (0.44 nm), indicating that size exclusion is at least partially responsible for the rejection. The ratio of solute radius (ri,s) to effective membrane pore radius (rp) was employed to compare ion rejection. For all of the ions, the rejection is higher than 70% when the ri,s/rp ratio is greater than 0.4 for the LFC-1 membrane, while for di-valent ions (CrO4 2 -, SO4 2 -, and HAsSO4 2 -) the rejection (38-56%) is fairly proportional to the ri,s/rp ratio (0.32-0.62) for the ESNA

  7. Expression profiling of Crambe abyssinica under arsenate stress identifies genes and gene networks involved in arsenic metabolism and detoxification

    Directory of Open Access Journals (Sweden)

    Kandasamy Suganthi

    2010-06-01

    Full Text Available Abstract Background Arsenic contamination is widespread throughout the world and this toxic metalloid is known to cause cancers of organs such as liver, kidney, skin, and lung in human. In spite of a recent surge in arsenic related studies, we are still far from a comprehensive understanding of arsenic uptake, detoxification, and sequestration in plants. Crambe abyssinica, commonly known as 'abyssinian mustard', is a non-food, high biomass oil seed crop that is naturally tolerant to heavy metals. Moreover, it accumulates significantly higher levels of arsenic as compared to other species of the Brassicaceae family. Thus, C. abyssinica has great potential to be utilized as an ideal inedible crop for phytoremediation of heavy metals and metalloids. However, the mechanism of arsenic metabolism in higher plants, including C. abyssinica, remains elusive. Results To identify the differentially expressed transcripts and the pathways involved in arsenic metabolism and detoxification, C. abyssinica plants were subjected to arsenate stress and a PCR-Select Suppression Subtraction Hybridization (SSH approach was employed. A total of 105 differentially expressed subtracted cDNAs were sequenced which were found to represent 38 genes. Those genes encode proteins functioning as antioxidants, metal transporters, reductases, enzymes involved in the protein degradation pathway, and several novel uncharacterized proteins. The transcripts corresponding to the subtracted cDNAs showed strong upregulation by arsenate stress as confirmed by the semi-quantitative RT-PCR. Conclusions Our study revealed novel insights into the plant defense mechanisms and the regulation of genes and gene networks in response to arsenate toxicity. The differential expression of transcripts encoding glutathione-S-transferases, antioxidants, sulfur metabolism, heat-shock proteins, metal transporters, and enzymes in the ubiquitination pathway of protein degradation as well as several unknown

  8. Evolution of arsenate toxicity in nodulated white lupine in a long-term culture.

    Science.gov (United States)

    Vázquez, Saúl; Esteban, Elvira; Carpena, Ramón O

    2008-09-24

    White lupine is an As-resistant legume that is of interest for phytoremediation of As-contaminated soils. To achieve successful phytoremediation, monitoring of the nutritional status of the selected plant species during the entire culture cycle is required to maintain a plant cover with high biomass production. A long-term pot experiment was carried out with nodulated lupine grown on perlite with 10 and 100 microM As concentrations. The reproductive period (from 10 weeks) was the most sensitive phenologic stage of white lupine to long-term As exposure. The 10 microM As treatment increased the uptake and translocation of micronutrients, except for Cu, mainly at flowering with As levels in pods below the statutory limit (1 mg kg (-1) fresh weight). However, the 100 microM As treatment induced significant differences compared to the control. These findings confirm the relatively high resistance of white lupine to arsenate and support the use of this species in phytoremediation and/or revegetation of As-contaminated sites, with special attention on P and Cu nutrition at flowering.

  9. Kinetics and mechanism of arsenate removal by nanosized iron oxide-coated perlite.

    Science.gov (United States)

    Mostafa, M G; Chen, Yen-Hua; Jean, Jiin-Shuh; Liu, Chia-Chuan; Lee, Yao-Chang

    2011-03-15

    This study discussed the adsorption kinetics of As(V) onto nanosized iron oxide-coated perlite. The effects of pH, initial concentration of As(V) and common anions on the adsorption efficiency were also investigated. It was observed that a 100% As(V) adsorption was achieved at pH value of 4-8 from the initial concentration containing 1.0 mg-As(V)L(-1) and the adsorption percentage depended on the initial concentration; the phosphate and silicate ions would not interfere with the adsorption efficiency. Furthermore, nanosized iron oxide-coated perlite (IOCP) has been shown to be an effective adsorbent for the removal of arsenate from water. The adsorption kinetics were studied using pseudo-first- and pseudo-second-order models, and the experimental data fitted well with the pseudo-second-order model. Moreover, it suggests that the Langmuir isotherm is more adequate than the Freundlich isotherm in simulating the adsorption isotherm of As(V). The adsorption rate constant is 44.84 L mg(-1) and the maximum adsorption capacity is 0.39 mg g(-1). These findings indicate that the adsorption property of IOCP gives the compound a great potential for applications in environmental remediation.

  10. Arsenic and chromium partitioning in a podzolic soil contaminated by chromated copper arsenate

    Energy Technology Data Exchange (ETDEWEB)

    Nico, Peter; Hopp, Luisa; Nico, Peter S.; Marcus, Matthew A.; Peiffer, Stefan

    2008-06-01

    This research combined the use of selective extractions and x-ray spectroscopy to examine the fate of As and Cr in a podzolic soil contaminated by chromated copper arsenate (CCA). Iron was enriched in the upper 30 cm due to a previous one-time treatment of the soil with Fe(II). High oxalate-soluble Al concentrations in the Bs horizon of the soil and micro-XRD data indicated the presence of short-range ordered aluminosilicates (i.e. proto-imogolite allophane, PIA). In the surface layers, Cr, as Cr(III), was partitioned between a mixed Fe(III)/Cr(III) solid phase that formed upon the Fe(II) application (25-50%) and a recalcitrant phase (50-75%) likely consisting of organic material such as residual CCA-treated wood. Deeper in the profile Cr appeared to be largely in the form of extractable (hydr)oxides. Throughout the soil, As was present as As(V). In the surface layers a considerable fraction of As was also associated with a recalcitrant phase, probably CCA-treated woody debris, and the remainder was associated with (hydr)oxide-like solid phases. In the Bs horizon, however, XAS and XRF findings strongly pointed to the presence of PIA acting as an effective adsorbent for As. This research shows for the first time the relevance of PIA for the adsorption of As in natural soils.

  11. Influence of the interaction between phosphate and arsenate on periphyton's growth and its nutrient uptake capacity.

    Science.gov (United States)

    Rodriguez Castro, Ma Carolina; Urrea, Gemma; Guasch, Helena

    2015-01-15

    Periphyton communities grown in microcosms were studied under the exposure to different arsenate (As) and phosphate (P) regimes with the aim of revealing the effect of chronic exposure to As on periphyton physiological and structural characteristics. Also, we aimed to study periphyton changes on sensitivity to As, exposed to different P and As regimes. As affected structural and functional parameters of periphyton communities starved of P, inhibiting algal growth, photosynthetic capacity, changing community composition and reducing the ability of the community to retain P. The effects of As on these parameters were only detected in P starved communities, showing that chronic exposure to As led to changes in the photosynthetic apparatus under the conditions of P-limitation, but not when P-availability was higher. This fact reveals a lower toxicity and/or a higher adaptation of the P-amended community. Intracellular As contents were higher in communities starved of P. However, As tolerance was only induced by the combination of As and P but not by As or P alone indicating that tolerance induction may be an ATP-dependent mechanism. This study reveals that chronic exposure of natural communities to environmentally realistic As concentrations will damage periphyton communities affecting key ecosystem processes, as P uptake, leading to changes in stream ecosystems, as these organisms play a key role in nutrient cycling through nutrient uptake and transfer to higher trophic levels.

  12. Modeling oxyanion adsorption on ferralic soil, part 2: chromate, selenate, molybdate, and arsenate adsorption.

    Science.gov (United States)

    Pérez, Claudio; Antelo, Juan; Fiol, Sarah; Arce, Florencio

    2014-10-01

    High levels of oxyanions are found in the soil environment, often as a result of human activity. At high concentrations, oxyanions can be harmful to both humans and wildlife. Information about the interactions between oxyanions and natural samples is essential for understanding the bioavailability, toxicity, and transport of these compounds in the environment. In the present study, the authors investigated the reactivity of different oxyanions (AsO4 , MoO4 , SeO4 , and CrO4 ) at different pH values in 2 horizons of a ferralic soil. By combining available microscopic data on iron oxides with the macroscopic data obtained, the authors were able to use the charge distribution model to accurately describe the adsorption of these 4 oxyanions and thus to determine the surface speciation. The charge distribution model was previously calibrated and evaluated using phosphate adsorption/desorption data. The adsorption behavior on ferralic soil is controlled mainly by the natural iron oxides present, and it is qualitatively analogous to that exhibited by synthetic iron oxides. The highest adsorption was found for arsenate ions, whereas the lowest was found for selenate, with chromate and molybdate ions showing an intermediate behavior.

  13. Preparation and certification of arsenate [As(V)] reference material, NMIJ CRM 7912-a.

    Science.gov (United States)

    Narukawa, Tomohiro; Kuroiwa, Takayoshi; Narushima, Izumi; Jimbo, Yasujiro; Suzuki, Toshihiro; Chiba, Koichi

    2010-05-01

    Arsenate [As(V)] solution reference material, National Metrology Institute of Japan (NMIJ) certified reference material (CRM) 7912-a, for speciation of arsenic species was developed and certified by NMIJ, the National Institute of Advanced Industrial Science and Technology. High-purity As(2)O(3) reagent powder was dissolved in 0.8 M HNO(3) solution and As(III) was oxidized to As(V) with HNO(3) to prepare 100 mg kg(-1) of As(V) candidate CRM solution. The solution was bottled in 400 bottles (50 mL each). The concentration of As(V) was determined by four independent analytical techniques-inductively coupled plasma mass spectrometry, inductively coupled plasma optical emission spectrometry, graphite furnace atomic absorption spectrometry, and liquid chromatography inductively coupled plasma mass spectrometry-according to As(V) calibration solutions, which were prepared from the arsenic standard of the Japan Calibration Service system and whose species was guaranteed to be As(V) by NMIJ. The uncertainties of all the measurements and preparation procedures were evaluated. The certified value of As(V) in the CRM is (99.53 +/- 1.67) mg kg(-1) (k = 2).

  14. Effect of arsenate As (V) on the biomarkers of Myriophyllum alterniflorum in oligotrophic and eutrophic conditions.

    Science.gov (United States)

    Krayem, M; Deluchat, V; Rabiet, M; Cleries, K; Lenain, J F; Saad, Z; Kazpard, V; Labrousse, P

    2016-03-01

    Alternate watermilfoil, Myriophyllum alterniflorum is an aquatic macrophyte found in the Limousin rivers (France) whose potential for biomonitoring of metal pollution has been demonstrated. The objective of the present study carried out in vitro was to identify biomarkers for an early detection of the pollution by a metalloid As (V) in eutrophic and oligotrophic conditions. A synthetic medium of similar composition to the waters of the River Vienne was prepared. The morphological development of watermilfoil was monitored for 30 days, with or without contamination by 100 μg L(-1) As (V). In addition, the mineralization of plants and the analysis of biomarkers (chlorophylls, photosynthetic and respiratory intensities …) were investigated after 21 days. Our results indicated that eutrophic medium, induced a decrease in chlorophyll pigments, in growth and an increase in H2O2 compared to the oligotrophic medium. While, the presence of As (V), led to a decrease in the osmotic potential, pigment content, photosynthesis and respiration rates and an inhibition of shoot branching of plants in both conditions. However, a significant increase in H2O2 content was noted in the eutrophic medium. Finally, As (V) was found to be more accumulated in roots than shoots in both conditions but was more accumulated in oligotrophic one. Therefore, we can conclude that the water trophic level modifies the response of M. alterniflorum in presence of arsenate. Thus, M. alterniflorum shows a great promise in water-quality biomonitoring.

  15. Co-adsorption of Trichloroethylene and Arsenate by Iron-Impregnated Granular Activated Carbon.

    Science.gov (United States)

    Deng, Baolin; Kim, Eun-Sik

    2016-05-01

    Co-adsorption of trichloroethylene (TCE) and arsenate [As(V)] was investigated using modified granular activated carbons (GAC): untreated, sodium hypochlorite-treated (NaClO-GAC), and NaClO with iron-treated GAC (NaClO/Fe-GAC). Batch experiments of single- [TCE or As(V)] and binary- [TCE and As(V)] components solutions are evaluated through Langmuir and Freundlich isotherm models and adsorption kinetic tests. In the single-component system, the adsorption capacity of As(V) was increased by the NaClO-GAC and the NaClO/Fe-GAC. The untreated GAC showed a low adsorption capacity for As(V). Adsorption of TCE by the NaClO/Fe-GAC was maximized, with an increased Freundlich constant. Removal of TCE in the binary-component system was decreased 15% by the untreated GAC, and NaClO- and NaClO/Fe-GAC showed similar efficiency to the single-component system because of the different chemical status of the GAC surfaces. Results of the adsorption isotherms of As(V) in the binary-component system were similar to adsorption isotherms of the single-component system. The adsorption affinities of single- and binary-component systems corresponded with electron transfer, competitive adsorption, and physicochemical properties.

  16. Enrichment of dissimilatory Fe(III)-reducing bacteria from groundwater of the Siklós BTEX-contaminated site (Hungary).

    Science.gov (United States)

    Farkas, Milán; Szoboszlay, Sándor; Benedek, Tibor; Révész, Fruzsina; Veres, Péter Gábor; Kriszt, Balázs; Táncsics, András

    2017-01-01

    Dissimilatory iron-reducing bacteria are commonly found in microbial communities of aromatic hydrocarbon-contaminated subsurface environments where they often play key role in the degradation of the contaminants. The Siklós benzene, toluene, ethylbenzene, and xylene (BTEX)-contaminated area is one of the best characterized petroleum hydrocarbon-contaminated sites of Hungary. Continuous monitoring of the microbial community in the center of the contaminant plume indicated the presence of an emerging Geobacter population and a Rhodoferax phylotype highly associated with aromatic hydrocarbon-contaminated subsurface environments. The aim of the present study was to make an initial effort to enrich Rhodoferax-related and other dissimilatory iron-reducing bacteria from this environment. Accordingly, four slightly different freshwater media were used to enrich Fe(III) reducers, differing only in the form of nitrogen source (organic, inorganic nitrogen or gaseous headspace nitrogen). Although enrichment of the desired Rhodoferax phylotype was not succeeded, Geobacter-related bacteria were readily enriched. Moreover, the different nitrogen sources caused the enrichment of different Geobacter species. Investigation of the diversity of benzylsuccinate synthase gene both in the enrichments and in the initial groundwater sample indicated that the Geobacter population in the center of the contaminant plume may not play a significant role in the anaerobic degradation of toluene.

  17. A method to study the effects of chemical and biological reduction of molybdate to molybdenum blue in bacteria.

    Science.gov (United States)

    Shukor, Yunus; Shamsuddin, Burhanuddin; Mohamad, Othman; Ithnin, Khalid

    2008-02-15

    In this research, we modify a previously developed assay for the quantification molybdenum blue to determine whether inhibitors to molybdate reduction in bacteria inhibits cellular reduction or inhibit the chemical formation of one of the intermediate of molybdenum blue; phosphomolybdate. We manage to prove that inhibition of molybdate reduction by phosphate and arsenate is at the level of phosphomolybdate and not cellular. We also prove that mercury is a physiological inhibitor to molybdate reduction. We suggest the use of this method to assess the effect of inhibitors and activators to molybdate reduction in bacteria.

  18. A SAM-dependent methyltransferase cotranscribed with arsenate reductase alters resistance to peptidyl transferase center-binding antibiotics in Azospirillum brasilense Sp7.

    Science.gov (United States)

    Singh, Sudhir; Singh, Chhaya; Tripathi, Anil Kumar

    2014-05-01

    The genome of Azospirillum brasilense harbors a gene encoding S-adenosylmethionine-dependent methyltransferase, which is located downstream of an arsenate reductase gene. Both genes are cotranscribed and translationally coupled. When they were cloned and expressed individually in an arsenate-sensitive strain of Escherichia coli, arsenate reductase conferred tolerance to arsenate; however, methyltransferase failed to do so. Sequence analysis revealed that methyltransferase was more closely related to a PrmB-type N5-glutamine methyltransferase than to the arsenate detoxifying methyltransferase ArsM. Insertional inactivation of prmB gene in A. brasilense resulted in an increased sensitivity to chloramphenicol and resistance to tiamulin and clindamycin, which are known to bind at the peptidyl transferase center (PTC) in the ribosome. These observations suggested that the inability of prmB:km mutant to methylate L3 protein might alter hydrophobicity in the antibiotic-binding pocket of the PTC, which might affect the binding of chloramphenicol, clindamycin, and tiamulin differentially. This is the first report showing the role of PrmB-type N5-glutamine methyltransferases in conferring resistance to tiamulin and clindamycin in any bacterium.

  19. Functionalized chitosan electrospun nanofiber for effective removal of trace arsenate from water

    Science.gov (United States)

    Min, Ling-Li; Zhong, Lu-Bin; Zheng, Yu-Ming; Liu, Qing; Yuan, Zhi-Huan; Yang, Li-Ming

    2016-08-01

    An environment-friendly iron functionalized chitosan elctrospun nanofiber (ICS-ENF) was synthesized for trace arsenate removal from water. The ICS-ENF was fabricated by electrospinning a mixture of chitosan, PEO and Fe3+ followed by crosslinking with ammonia vapor. The physicochemical properties of ICS-ENF were characterized by FESEM, TEM-EDX and XRD. The ICS-ENF was found to be highly effective for As(V) adsorption at neutral pH. The As(V) adsorption occurred rapidly and achieved equilibrium within 100 min, which was well fitted by pseudo-second-order kinetics model. The As(V) adsorption decreased with increased ionic strength, suggesting an outer-sphere complexation of As(V) on ICS-ENF. Freundlich model well described the adsorption isotherm, and the maximum adsorption capacity was up to 11.2 mg/g at pH 7.2. Coexisting anions of chloride and sulfate showed negligible influence on As(V) removal, but phosphate and silicate significantly reduced As(V) adsorption by competing for adsorption sites. FTIR and XPS analysis demonstrated -NH, -OH and C-O were responsible for As(V) uptake. ICS-ENF was easily regenerated using 0.003 M NaOH, and the removal rate remained above 98% after ten successively adsorption-desorption recycles. This study extends the potential applicability of electrospun nanofibers for water purification and provides a promising approach for As(V) removal from water.

  20. Determination of chromated copper arsenate (CCA) in treated wood of Eucalyptus

    Energy Technology Data Exchange (ETDEWEB)

    Parreira, Paulo S., E-mail: parreira@uel.b [Universidade Estadual de Londrina (UEL), PR (Brazil). Dept. de Fisica. Lab.de Fisica Nuclear Aplicada; Vendrametto, Guilherme R.; Cunha, Magda E.T., E-mail: grvendrametto@gmail.co [Universidade Norte do Parana, Arapongas, PR (Brazil). Centro de Ciencias Humanas, da Saude, Exatas e Tecnologicas-A

    2009-07-01

    This work deals with the possible application of a portable energy dispersive handmade system (PXRF-LFNA-02) for the determination of Chromium, Copper and Arsenic in the preservative solution used to protect commercial wood of Eucalyptus, which are employed as wood fence, posts, contention fences, railroad sleepers, etc. It was prepared five body-of-proof made of eucalyptus alburnum with different concentrations for each element varying from 0.0061 to 0.0180 (g/g) for CrO{sub 3}, 0.0024 to 0.0070 (g/g) for CuO and 0.0044 to 0.0129 (g/g) for As{sub 2}O{sub 5}. Four of them were used for calibration curves and one used as reference sample. It was used a commercial CCA (Chromated Copper Arsenate ) solution to prepare the samples. The results show a good linear regression between concentrations and X-rays intensities, after applied the multiple linear regression methodology for interelemental corrections. The values obtained with this methodology were 3.01(kg/m{sup 3}), 1.18 (kg/m{sup 3}) e 2.21 (kg/m{sup 3}) for CrO{sub 3}, CuO and As{sub 2}O{sub 5}, respectively, while the nominal values are 2.90 (kg/m{sup 3}) for CrO{sub 3}, 1.13 (kg/m{sup 3}) for CuO and 2.07 (kg/m{sup 3}) for As{sub 2}O{sub 5}. The ED-XRF (Energy Dispersive X-Rays Fluorescence) is a well established technique with high-speed of analytical procedure and its portable configuration allowing a multielemental, simultaneous and non destructive analyses besides in situ application. (author)

  1. The effect of co-existing solutes on arsenate removal with hydrotalcite compound.

    Science.gov (United States)

    Kiso, Y; Jung, Y J; Yamamoto, H; Oguchi, T; Kuzawa, K; Yamada, T; Kim, S S; Ahn, K H

    2010-01-01

    Hydrotalcite (HTAL-Cl), an inorganic anion exchanger, is of use as an adsorbent for the removal of arsenate (As(V)) in water systems. The adsorption properties of HTAL-Cl for As(V) and the effects of co-existing anions on the As(V) removal performance were investigated in this work. Under the conditions of pH>or=4, the adsorption capacity for As(V) gradually decreased with an increase of pH, but As(V) was removed effectively within the range of pH = 5-8. Co-existing anions interfered As(V) removal, and the effect decreased in the order of HPO(4)(2-) > HCO(3)(-) > SO(4)(2-) > Cl(-). In binary solute systems containing phosphate and As(V), the maximum adsorption capacity of HTAL-Cl was 0.95 mmol g(-1) for phosphate and 0.65 mmol g(-1) for As(V): the total of these values corresponded to the maximum adsorption capacity for As(V) in single solute systems. The adsorption isotherms in these binary solute systems were approximated by the following modified Langmuir equations:As(V): q(As) = 18.7 radicalC(As)/(1 + 21.5 radicalC(P) + 12.8 radicalC(As)), phosphate : q(P) = 33.1 radicalC(P)/(1 + 21.5 radicalC(P) + 12.8 radicalC(As)). The column adsorption experiments showed that the adsorbed As(V) was released by the phosphate adsorption, because phosphate was adsorbed more strongly on HTAL-CL than As(V).

  2. Arsenate and cadmium co-adsorption and co-precipitation on goethite

    Energy Technology Data Exchange (ETDEWEB)

    Jiang, Wei [Environment Research Institute, Shandong University, Jinan 250100 (China); Lv, Jitao; Luo, Lei [State Key Laboratory of Environmental Chemistry and Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085 (China); Yang, Kun [Department of Environmental Science, Zhejiang University, Hangzhou 310058 (China); Lin, Yongfeng; Hu, Fanbao [Environment Research Institute, Shandong University, Jinan 250100 (China); Zhang, Jing [State Key Laboratory of Synchrotron Radiation, Institute of High Energy Physics, Chinese Academy of Sciences, Beijing 100039 (China); Zhang, Shuzhen, E-mail: szzhang@rcees.ac.cn [State Key Laboratory of Environmental Chemistry and Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085 (China)

    2013-11-15

    Highlights: • As enhances Cd adsorption amount on goethite. • Cd fixed through precipitation is more difficult to get released. • As in co-precipitates is easier to release than in its adsorption complexes. -- Abstract: Arsenate (As(V), AsO{sub 4}{sup 3−}) and cadmium (Cd) are among the toxic elements of most concern. Their sorption behaviors on goethite were studied by batch experiments (pH edges, isotherms and kinetics) and X-ray diffraction (XRD). Arsenic coordination environment was explored by X-ray absorbance fine structure (EXAFS) analysis. Sorption isotherms of both As(V) and Cd on goethite could be divided into the adsorption-dominated and precipitation-dominated parts, while their sorption showed different pH-dependency and sorption reversibility. Cadmium adsorption was enhanced in the presence of AsO{sub 4}{sup 3−}, which could be explained by the decrease in the electrostatic potential due to the sorption of AsO{sub 4}{sup 3−} and the formation of a ternary Cd–As(V)–goethite complex. Based on the EXAFS study, AsO{sub 4}{sup 3−} adsorbed on goethite mainly formed bidentate–binuclear complex. The high loadings of Cd changed the As(V)–Fe distance and its coordination number. However, Cd did not affect the As(V) adsorption amount in the adsorption-dominated region. When As(V) and Cd formed co-precipitates, their sorption amounts were both increased. The formation of co-precipitates decreased the mobility of Cd but increased the mobility of As(V) because less As(V) was sorbed on goethite through surface complexation. This study will provide better understandings on As(V) and Cd transport and useful information on their remediation strategies.

  3. Soil pollution assessment and identification of hyperaccumulating plants in chromated copper arsenate (CCA) contaminated sites, Korea.

    Science.gov (United States)

    Usman, Adel R A; Lee, Sang Soo; Awad, Yasser M; Lim, Kyoung Jae; Yang, Jae E; Ok, Yong Sik

    2012-05-01

    In recent decades, heavy metal contamination in soil adjacent to chromated copper arsenate (CCA) treated wood has received increasing attention. This study was conducted to determine the pollution level (PL) based on the concentrations of Cr, Cu and As in soils and to evaluate the remediative capacity of native plant species grown in the CCA contaminated site, Gangwon Province, Korea. The pollution index (PI), integrated pollution index (IPI), bioaccumulation factors (BAF(shoots) and BAF(roots)) and translocation factor (TF) were determined to ensure soil contamination and phytoremediation availability. The 19 soil samples from 10 locations possibly contaminated with Cr, Cu and As were collected. The concentrations of Cr, Cu and As in the soil samples ranged from 50.56-94.13 mg kg(-1), 27.78-120.83 mg kg(-1), and 0.13-9.43 mg kg(-1), respectively. Generally, the metal concentrations decreased as the distance between the CCA-treated wood structure and sampling point increased. For investigating phytoremediative capacity, the 19 native plant species were also collected in the same area with soil samples. Our results showed that only one plant species of Iris ensata, which presented the highest accumulations of Cr (1120 mg kg(-1)) in its shoot, was identified as a hyperaccumulator. Moreover, the relatively higher values of BAF(shoot) (3.23-22.10) were observed for Typha orientalis, Iris ensata and Scirpus radicans Schk, suggesting that these plant species might be applicable for selective metal extraction from the soils. For phytostabilization, the 15 plant species with BAF(root) values>1 and TF values<1 were suitable; however, Typha orientalis was the best for Cr. Copyright © 2012 Elsevier Ltd. All rights reserved.

  4. Adsorption kinetics and isotherms of arsenite and arsenate on hematite nanoparticles and aggregates.

    Science.gov (United States)

    Dickson, Dionne; Liu, Guangliang; Cai, Yong

    2017-01-15

    Iron (Fe) nanoparticles, e.g., zerovalent iron (ZVI) and iron oxide nanoparticles (IONP), have been used for remediation and environmental management of arsenic (As) contamination. These Fe nanoparticles, although originally nanosized, tend to form aggregates, in particular in the environment. The interactions of As with both nanoparticles and micron-sized aggregates should be considered when these Fe nanomaterials are used for mitigation of As issue. The objective of this study was to compare the adsorption kinetics and isotherm of arsenite (As(III)) and arsenate (As(V)) on bare hematite nanoparticles and aggregates and how this affects the fate of arsenic in the environment. The adsorption kinetic process was investigated with regards to the aggregation of the nanoparticles and the type of sorbed species. Kinetic data were best described by a pseudo second-order model. Both As species had similar rate constants, ranging from 3.82 to 6.45 × 10(-4) g/(μg·h), as rapid adsorption occurred within the first 8 h regardless of particle size. However, hematite nanoparticles and aggregates showed a higher affinity to adsorb larger amounts of As(V) (4122 ± 62.79 μg/g) than As(III) (2899 ± 71.09 μg/g) at equilibrium. We were able to show that aggregation and sedimentation of hematite nanoparticles occurs during the adsorption process and this might cause the immobilization and reduced bioavailability of arsenic. Isotherm studies were described by the Freundlich model and it confirmed that hematite nanoparticles have a significantly higher adsorption capacity for both As(V) and As(III) than hematite aggregates. This information is useful and can assist in predicting arsenic adsorption behavior and assessing the role of iron oxide nanoparticles in the biogeochemical cycling of arsenic.

  5. Selective adsorption of arsenate and the reversible structure transformation of the mesoporous metal-organic framework MIL-100(Fe).

    Science.gov (United States)

    Cai, Jianhua; Wang, Xueyun; Zhou, Yue; Jiang, Li; Wang, Chunru

    2016-04-28

    Here we describe a highly porous metal-organic framework MIL-100(Fe), which is initially used as an arsenate adsorbent in water. An appropriate mesoporous size allows AsO4(3-) to enter unrestrained and then be captured successfully, furthermore resulting in the damage of long-range order of uniform mesopores. Moreover, the porous framework could also make AsO4(3-) be reversibly desorbed without structural changes and the long-range order of mesopores be recovered again.

  6. Mechanism and Application of Microbial Dissimilatory Reduction Metal Oxide%微生物异化还原金属氧化物的机理及应用

    Institute of Scientific and Technical Information of China (English)

    李浩然; 冯雅丽; 周良; 祝学远; 杜竹玮

    2007-01-01

    为考查异化还原微生物在浸出金属氧化物中的行为,提高微生物浸出深海多金属结核的效率.从深海沉积物中分离能异化还原金属氧化矿的金属还原菌,应用于还原浸出深海多金属结核中锰、镍、钴等金属,锰的浸出率可达97%,其它金属达80%以上.蒽醌类的电子传递中间体复合物加速了异化还原浸出的速率,5 d可以提高2.0 mmol/L.利用Geobacter metallireducens构建了微生物燃料电池,研究了微生物异化还原金属氧化物的机理,结果表明,微生物以直接吸附接触方式还原金属氧化物,在氧化物颗粒表面形成的生物膜在异化还原过程中起关键作用.

  7. Treatment of synthetic arsenate wastewater with iron-air fuel cell electrocoagulation to supply drinking water and electricity in remote areas.

    Science.gov (United States)

    Kim, Jung Hwan; Maitlo, Hubdar Ali; Park, Joo Yang

    2017-05-15

    Electrocoagulation with an iron-air fuel cell is an innovative arsenate removal system that can operate without an external electricity supply. Thus, this technology is advantageous for treating wastewater in remote regions where it is difficult to supply electricity. In this study, the possibility of real applications of this system for arsenate treatment with electricity production was verified through electrolyte effect investigations using a small-scale fuel cell and performance testing of a liter-scale fuel cell stack. The electrolyte species studied were NaCl, Na2SO4, and NaHCO3. NaCl was overall the most effective electrolyte for arsenate treatment, although Na2SO4 produced the greatest electrical current and power density. In addition, although the current density and power density were proportional to the concentrations of NaCl and Na2SO4, the use of concentrations above 20 mM of NaCl and Na2SO4 inhibited arsenate treatment due to competition effects between anions and arsenate in adsorption onto the iron hydroxide. The dominant iron hydroxide produced at the iron anode was found to be lepidocrocite by means of Raman spectroscopy. A liter-scale four-stack iron-air fuel cell with 10 mM NaCl electrolyte was found to be able to treat about 300 L of 1 ppm arsenate solution to below 10 ppb during 1 day, based on its 60-min treatment capacity, as well as produce the maximum power density of 250 mW/m(2).

  8. Influences of size-fractionated humic acids on arsenite and arsenate complexation and toxicity to Daphnia magna.

    Science.gov (United States)

    Ren, Jinqian; Fan, Wenhong; Wang, Xiangrui; Ma, Qingquan; Li, Xiaomin; Xu, Zhizhen; Wei, Chaoyang

    2017-01-01

    The intrinsic physicochemical properties of dissolved organic matter (DOM) may affect the mobility and toxicity of arsenic in aquatic environments. In the present study, the humic acid (HA) was ultra-filtered into five fractions according to molecular weight, and their physicochemical properties were characterized. Complexation of HA fractions with arsenite and arsenate was first determined by differential pulse polarography (DPP). The influences of HA fractions on arsenic toxicity were then examined using Daphnia magna as a model organism. As(V) had a higher affinity with HA than As(III), and their complexation was dependent on the total acidity and fluorescence characteristics of DOM. We demonstrated that the acidity and fluorescence also better explained the As toxicity to daphnids than UV absorbance and hydraulic diameter. Arsenic speciation determined by DPP significantly affected the toxicity of arsenite and arsenate. The results extended the free-ion activity model application to the case of arsenic. The present study clearly indicated that DOM with different molecular weights has distinct physicochemical properties, and could influence the speciation and toxicity of As to different extent. Copyright © 2016 Elsevier Ltd. All rights reserved.

  9. Time course of arsenic species in the brain and liver of mice after oral administration of arsenate

    Energy Technology Data Exchange (ETDEWEB)

    Juarez-Reyes, Amida; Jimenez-Capdeville, Maria E.; Delgado, Juan M.; Ortiz-Perez, Deogracias [Universidad Autonoma de San Luis Potosi, Departamento de Bioquimica, Facultad de Medicina, San Luis Potosi (Mexico)

    2009-06-15

    The understanding of the biomethylation process of arsenic is essential to uncover the mechanisms of arsenic toxicity. This work analyzes the time course of arsenic species in the brain and liver of adult mice, after a single oral administration of three arsenate doses [2.5, 5.0 and 10 mg As(V)/kg]. Quantification of arsenic species was performed by means of liquid chromatography coupled to atomic fluorescence 2, 5, 8, 12 and 24 h after administration. The results show that 2 h after arsenate administration inorganic arsenic arrives to the liver and its concentration diminishes gradually until becoming non-detectable at 12 h. Arsenic takes longer to appear in the brain and it is present only as dimethyl arsinic acid. Since arsenic concentration decreases in liver while it increases in the brain, this suggests that the arsenic metabolite reaches the brain after formation in the liver. Importantly, the fact that dimethyl arsinic acid is no longer present after 24 h suggests the existence of a mechanism to clear this metabolite from brain tissue. (orig.)

  10. Rhizosphere colonization and arsenic translocation in sunflower (Helianthus annuus L.) by arsenate reducing Alcaligenes sp. strain Dhal-L.

    Science.gov (United States)

    Cavalca, Lucia; Corsini, Anna; Bachate, Sachin Prabhakar; Andreoni, Vincenza

    2013-10-01

    In the present study, six arsenic-resistant strains previously isolated were tested for their plant growth promoting characteristics and heavy metal resistance, in order to choose one model strain as an inoculum for sunflower plants in pot experiments. The aim was to investigate the effect of arsenic-resistant strain on sunflower growth and on arsenic uptake from arsenic contaminated soil. Based on plant growth promoting characteristics and heavy metal resistance, Alcaligenes sp. strain Dhal-L was chosen as an inoculum. Beside the ability to reduce arsenate to arsenite via an Ars operon, the strain exhibited 1-amino-cyclopropane-1-carboxylic acid deaminase activity and it was also able to produce siderophore and indole acetic acid. Pot experiments were conducted with an agricultural soil contaminated with arsenic (214 mg kg⁻¹). A real time PCR method was set up based on the quantification of ACR3(2) type of arsenite efflux pump carried by Alcaligenes sp. strain Dhal-L, in order to monitor presence and colonisation of the strain in the bulk and rhizospheric soil. As a result of strain inoculation, arsenic uptake by plants was increased by 53 %, whereas ACR3(2) gene copy number in rhizospheric soil was 100 times higher in inoculated than in control pots, indicating the colonisation of strain. The results indicated that the presence of arsenate reducing strains in the rhizosphere of sunflower influences arsenic mobilization and promotes arsenic uptake by plant.

  11. Selenite supplementation reduces arsenate uptake greater than phosphate but compromises the phosphate level and physiological performance in hydroponically grown Oryza sativa L.

    Science.gov (United States)

    Kumar, Navin; Dubey, Arvind Kumar; Jaiswal, Praveen Kumar; Sahu, Nayan; Behera, Soumit Kumar; Tripathi, Rudra Deo; Mallick, Shekhar

    2016-01-01

    The present study evaluates the reduction of arsenate (As[V]) uptake in rice seedlings through individual and combined supplementation of phosphate (PO4(3-)) and selenite (Se[IV]) in a hydroponic condition. The toxic response in seedlings receiving As(V) manifested as inhibition in physiological parameters such as water use efficiency, stomatal conductance, photosynthetic assimilation rate, transpiration rate, photochemical quenching, and electron transport rate, along with growth. Arsenic accumulation significantly decreased with Se(IV) treatment (0.5 μg mL(-1), 1 μg mL(-1), and 2 μg mL(-1)) in a dose-dependent manner (20%, 35%, and 53%, respectively); however, it compromised the PO4(3-) level and physiological performance. The lower level of Se(IV), (0.5 μg mL(-1)), was relatively beneficial in terms of reduction in As accumulation than the higher level of Se(IV), (2 μg mL(-1)), which was rather toxic. Further, decrease in As uptake, replenished the level of PO4(3-) and physiological performance in seedlings treated with As+Se+P compared with those treated with As+Se. However, supplementation with only PO4(3-) (10 μg mL(-1) and 20 μg mL(-1)) along with As(V) was less effective in reducing As accumulation compared with As+Se. Seedlings receiving As+Se+P also exhibited lower thiobarbituric acid-reactive substances (TBARS) and electrical conductivity levels compared with both As+Se and As+P. Among all the treatments, the activity of antioxidant enzymes was highest in plants treated with As+Se+P. Hence, the higher antioxidant enzyme activity in As+Se+P along with lower levels of TBARS, H2 O2 , and As accumulation are attributed to the competitive reduction in As uptake in the presence of Se(IV) and PO4(3-).

  12. Arsenate and fluoride enhanced each other's uptake in As-sensitive plant Pteris ensiformis.

    Science.gov (United States)

    Das, Suchismita; de Oliveira, Letuzia M; da Silva, Evandro; Ma, Lena Q

    2017-08-01

    We investigated the effects of arsenate (AsV) and fluoride (F) on each other's uptake in an As-sensitive plant Pteris ensiformis. Plants were exposed to 1) 0.1 × Hoagland solution control, 2) 3.75 mg L(-1) As and 1.9, 3.8, or 7.6 mg L(-1) F, or 3) 1 mg L(-1) F and 3.75 mg L(-1) or 7.5 mg L(-1) As for 7 d in hydroponics. P. ensiformis accumulated 14.7-32.6 mg kg(-1) As at 3.75 mg L(-1) AsV, and 99-145 mg kg(-1) F at 1 mg L(-1) F. Our study revealed that AsV and F increased each other's uptake when co-present. At 1.9 mg L(-1), F increased frond As uptake from 14.7 to 40.3 mg kg(-1), while 7.5 mg L(-1) As increased frond F uptake from 99 to 371 mg kg(-1). Although, AsV was the predominant As species in all tissues, F enhanced AsIII levels in the rhizomes and fronds, while the reverse was observed in the roots. Increasing As concentrations also enhanced TBARS and H2O2 in tissues, indicating oxidative stress. However, F alleviated As stress by lowering their levels in the fronds. Frond and root membrane leakage were also evident due to As or F exposure. The results may facilitate better understanding of the mechanisms underlying the co-uptake of As and F in plants. However, the mechanisms of how they enhance each other's uptake in P. ensiformis need further investigation. Published by Elsevier Ltd.

  13. An intertwined evolutionary history of methanogenic archaea and sulfate reduction.

    Directory of Open Access Journals (Sweden)

    Dwi Susanti

    Full Text Available Hydrogenotrophic methanogenesis and dissimilatory sulfate reduction, two of the oldest energy conserving respiratory systems on Earth, apparently could not have evolved in the same host, as sulfite, an intermediate of sulfate reduction, inhibits methanogenesis. However, certain methanogenic archaea metabolize sulfite employing a deazaflavin cofactor (F(420-dependent sulfite reductase (Fsr where N- and C-terminal halves (Fsr-N and Fsr-C are homologs of F(420H(2 dehydrogenase and dissimilatory sulfite reductase (Dsr, respectively. From genome analysis we found that Fsr was likely assembled from freestanding Fsr-N homologs and Dsr-like proteins (Dsr-LP, both being abundant in methanogens. Dsr-LPs fell into two groups defined by following sequence features: Group I (simplest, carrying a coupled siroheme-[Fe(4-S(4] cluster and sulfite-binding Arg/Lys residues; Group III (most complex, with group I features, a Dsr-type peripheral [Fe(4-S(4] cluster and an additional [Fe(4-S(4] cluster. Group II Dsr-LPs with group I features and a Dsr-type peripheral [Fe(4-S(4] cluster were proposed as evolutionary intermediates. Group III is the precursor of Fsr-C. The freestanding Fsr-N homologs serve as F(420H(2 dehydrogenase unit of a putative novel glutamate synthase, previously described membrane-bound electron transport system in methanogens and of assimilatory type sulfite reductases in certain haloarchaea. Among archaea, only methanogens carried Dsr-LPs. They also possessed homologs of sulfate activation and reduction enzymes. This suggested a shared evolutionary history for methanogenesis and sulfate reduction, and Dsr-LPs could have been the source of the oldest (3.47-Gyr ago biologically produced sulfide deposit.

  14. ARSENATE AND ARSENITE REMOVAL BY ZERO-VALENT IRON: EFFECTS OF PHOSPHATE, SILICATE, CARBONATE, BORATE, SULFATE, CHROMATE, MOLYBDATE, AND NITRATE, RELATIVE TO CHLORIDE

    Science.gov (United States)

    Batch tests were performed to evaluate the effects of inorganic anion competition on the kinetics of arsenate (As(V)) and arsenite (As(III)) removal by zerovalent iron (Peerless Fe0) in aqueous solution. The oxyanions underwent either sorption-dominated reactions (phosphate, sil...

  15. Molecular characterization of two glutathione peroxidase genes in Mytilus galloprovincialis and their transcriptional responses to sub-chronic arsenate and cadmium exposure

    Directory of Open Access Journals (Sweden)

    Q Wang

    2014-05-01

    Full Text Available Glutathione peroxidases (GPxs are key enzymes in the antioxidant defense system of living organisms, and protect organisms against oxidative stresses. In this study, the full-length cDNA sequences encoding cytosolic GPx (MgcGPx and phospholipid-hydroperoxide GPx (MgGPx4 were identified from Mytilus galloprovincialis. The mussels were exposed to 0, 1, 10, and 100 μg/L cadmium and arsenate for 30 days. The mRNA transcripts of these two genes and total GPx activity were examined in the gills and digestive gland after contaminants exposure. The mussels exposed to cadmium and arsenate responded mainly by down-regulating MgcGPx and MgGPx4 mRNA transcription in gills and up-regulating transcription in digestive gland. However, total GPx activities increased following cadmium exposure but decreased after arsenate stress in both tissues. These results suggest that MgcGPx and MgGPx4 perhaps play an important role in maintaining cellular redox homeostasis and protecting M. galloprovincialis against cadmium and arsenate toxicity. It can also be inferred that these genes have the potential to be used as molecular biomarkers for assessing cellular stress and toxicity of contaminants in this mussel.

  16. INDUCTION OF CELL PROLIFERATION AND APOPTOSIS IN HL60 AND HACAT CELLS BY ARSENIC, ARSENATE, AND ARSENIC-CONTAMINATED DRINKING WATER

    Science.gov (United States)

    Induction of cell proliferation and apoptosis in HL-60 and HaCaT cells by arsenite, arsenate and arsenic-contaminated drinking water. T-C. Zhang, M. Schmitt, J. L. Mumford National Research Council, Washington DC and U.S. Environmental Protection Agency, NHEERL, Research Triangle...

  17. Arsenic(V) Incorporation in Vivianite during Microbial Reduction of Arsenic(V)-Bearing Biogenic Fe(III) (Oxyhydr)oxides.

    Science.gov (United States)

    Muehe, E Marie; Morin, Guillaume; Scheer, Lukas; Pape, Pierre Le; Esteve, Imène; Daus, Birgit; Kappler, Andreas

    2016-03-01

    The dissolution of arsenic-bearing iron(III) (oxyhydr)oxides during combined microbial iron(III) and arsenate(V) reduction is thought to be the main mechanism responsible for arsenic mobilization in reducing environments. Besides its mobilization during bioreduction, arsenic is often resequestered by newly forming secondary iron(II)-bearing mineral phases. In phosphate-bearing environments, iron(II) inputs generally lead to vivianite precipitation. In fact, in a previous study we observed that during bioreduction of arsenate(V)-bearing biogenic iron(III) (oxyhydr)oxides in phosphate-containing growth media, arsenate(V) was immobilized by the newly forming secondary iron(II) and iron(II)/iron(III)mineral phases, including vivianite. In the present study, changes in arsenic redox state and binding environment in these experiments were analyzed. We found that arsenate(V) partly replaced phosphate in vivianite, thus forming a vivianite-symplesite solid solution identified as Fe3(PO4)1.7(AsO4)0.3·8H2O. Our data suggests that in order to predict the fate of arsenic during the bioreduction of abiogenic and biogenic iron(III) (oxyhydr)oxides in arsenic-contaminated environments, the formation of symplesite-vivianite minerals needs to be considered. Indeed, such mineral phases could contribute to a delayed and slow release of arsenic in phosphate-bearing surface and groundwater environments.

  18. Annual progress Report on research related to our research project “Stabilization of Plutonium in Subsurface Environments via Microbial Reduction and Biofilm Formation” funded by the Environmental Remediation Sciences Division (ERSD)

    Energy Technology Data Exchange (ETDEWEB)

    New, Mary

    2006-06-01

    The overarching goal of this research project is to investigate and optimize the mechanisms for in situ immobilization of Pu species by naturally-occurring bacteria. Specific research objectives are: (a) investigate the mechanism of bacterial accumulation and immobilization of plutonium species by biofilm formation under aerobic conditions and (b) to demonstrate the direct and indirect stabilization of Pu via dissimilatory reduction by Geobacter metallireducens.

  19. Mechanistic investigation of Fe(III) oxide reduction by low molecular weight organic sulfur species

    Science.gov (United States)

    Eitel, Eryn M.; Taillefert, Martial

    2017-10-01

    Low molecular weight organic sulfur species, often referred to as thiols, are known to be ubiquitous in aquatic environments and represent important chemical reductants of Fe(III) oxides. Thiols are excellent electron shuttles used during dissimilatory iron reduction, and in this capacity could indirectly affect the redox state of sediments, release adsorbed contaminants via reductive dissolution, and influence the carbon cycle through alteration of bacterial respiration processes. Interestingly, the reduction of Fe(III) oxides by thiols has not been previously investigated in environmentally relevant conditions, likely due to analytical limitations associated with the detection of thiols and their oxidized products. In this study, a novel electrochemical method was developed to simultaneously determine thiol/disulfide pair concentrations in situ during the reduction of ferrihydrite in batch reactors. First order rate laws with respect to initial thiol concentration were confirmed for Fe(III) oxyhydroxide reduction by four common thiols: cysteine, homocysteine, cysteamine, and glutathione. Zero order was determined for both Fe(III) oxyhydroxide and proton concentration at circumneutral pH. A kinetic model detailing the molecular mechanism of the reaction was optimized with proposed intermediate surface structures. Although metal oxide overall reduction rate constants were inversely proportional to the complexity of the thiol structure, the extent of metal reduction increased with structure complexity, indicating that surface complexes play a significant role in the ability of these thiols to reduce iron. Taken together, these results demonstrate the importance of considering the molecular reaction mechanism at the iron oxide surface when investigating the potential for thiols to act as electron shuttles during dissimilatory iron reduction in natural environments.

  20. Effects of Dissolved Carbonate on Arsenate Adsorption and Surface Speciation at the Hematite-Water Interface

    Science.gov (United States)

    Arai, Y.; Sparks, D.L.; Davis, J.A.

    2004-01-01

    Effects of dissolved carbonate on arsenate [As(V)] reactivity and surface speciation at the hematite-water interface were studied as a function of pH and two different partial pressures of carbon dioxide gas [PCO2 = 10 -3.5 atm and ???0; CO2-free argon (Ar)] using adsorption kinetics, pseudo-equilibrium adsorption/titration experiments, extended X-ray absorption fine structure spectroscopic (EXAFS) analyses, and surface complexation modeling. Different adsorbed carbonate concentrations, due to the two different atmospheric systems, resulted in an enhanced and/or suppressed extent of As(V) adsorption. As(V) adsorption kinetics [4 g L -1, [As(V)]0 = 1.5 mM and / = 0.01 M NaCl] showed carbonate-enhanced As(V) uptake in the air-equilibrated systems at pH 4 and 6 and at pH 8 after 3 h of reaction. Suppressed As(V) adsorption was observed in the air-equilibrated system in the early stages of the reaction at pH 8. In the pseudo-equilibrium adsorption experiments [1 g L-1, [As(V)] 0 = 0.5 mM and / = 0.01 M NaCl], in which each pH value was held constant by a pH-stat apparatus, effects of dissolved carbonate on As(V) uptake were almost negligible at equilibrium, but titrant (0.1 M HCl) consumption was greater in the air-equilibrated systems (PCO2 = 10-3.5 atm)than in the CO2-free argon system at pH 4-7.75. The EXAFS analyses indicated that As(V) tetrahedral molecules were coordinated on iron octahedral via bidentate mononuclear (???2.8 A??) and bidentate binuclear (???3.3 A??) bonding at pH 4.5-8 and loading levels of 0.46-3.10 ??M m-2. Using the results of the pseudoequilibrium adsorption data and the XAS analyses, the pH-dependent As(V) adsorption under the PCO2 = 10-3.5 atm and the CO2-free argon system was modeled using surface complexation modeling, and the results are consistent with the formation of nonprotonated bidentate surface species at the hematite surfaces. The results also suggest that the acid titrant consumption was strongly affected by changes to

  1. Sulfur isotope fractionation during bacterial sulfate reduction in organic-rich sediments

    DEFF Research Database (Denmark)

    Habicht, K S; Canfield, D E

    1997-01-01

    by the natural populations of sulfate reducers and previous measurements from pure cultures. This was somewhat surprising given the extremely high rates of sulfate reduction in the experiments. Our results are explained if we conclude that the fractionation was mainly controlled by the specific rate of sulfate......Isotope fractionation during sulfate reduction by natural populations of sulfate-reducing bacteria was investigated in the cyanobacterial microbial mats of Solar Lake, Sinai and the sediments of Logten Lagoon sulfuretum, Denmark. Fractionation was measured at different sediment depths, sulfate...... concentrations, and incubation temperatures. Rates of sulfate reduction varied between 0.1 and 37 micromoles cm-3 d-1, with the highest rates among the highest ever reported from natural sediments. The depletion of 34S during dissimilatory sulfate reduction ranged from 16% to 42%, with the largest 34S...

  2. Sulfur isotope fractionation during bacterial sulfate reduction in organic-rich sediments

    DEFF Research Database (Denmark)

    Habicht, K S; Canfield, D E

    1997-01-01

    Isotope fractionation during sulfate reduction by natural populations of sulfate-reducing bacteria was investigated in the cyanobacterial microbial mats of Solar Lake, Sinai and the sediments of Logten Lagoon sulfuretum, Denmark. Fractionation was measured at different sediment depths, sulfate...... concentrations, and incubation temperatures. Rates of sulfate reduction varied between 0.1 and 37 micromoles cm-3 d-1, with the highest rates among the highest ever reported from natural sediments. The depletion of 34S during dissimilatory sulfate reduction ranged from 16% to 42%, with the largest 34S...... sulfate reduction. Therefore, additional processes contributing to the fractionation of sulfur isotopes in the sediments are indicated. From both Solar Lake and Logten Lagoon we were able to enrich cultures of elemental sulfur-disproportionating bacteria. We suggest that isotope fractionation accompanying...

  3. Effect of post-treatment processing on copper migration from Douglas-fir lumber treated with ammoniacal copper zinc arsenate.

    Science.gov (United States)

    Ye, Min; Morrell, Jeffrey J

    2015-04-01

    Migration of heavy metals into aquatic environments has become a concern in some regions of the world. Many wood preservatives are copper based systems that have the potential to migrate from the wood and into the surrounding environment. Some wood treaters have developed "best management practices" (BMPs) that are designed to reduce the risk of migration, but there are few comparative studies assessing the efficacy of these processes. The potential for using various heating combinations to limit copper migration was assessed using ammoniacal coper zinc arsenate treated Douglas-fir lumber. Kiln drying and air drying both proved to be the most effective methods for limiting copper migration, while post-treatment steaming or hot water immersion produced more variable results. The results should provide guidance for improving the BMP processes.

  4. Possible Roles of Plant Sulfurtransferases in Detoxification of Cyanide, Reactive Oxygen Species, Selected Heavy Metals and Arsenate

    Directory of Open Access Journals (Sweden)

    Parvin Most

    2015-01-01

    Full Text Available Plants and animals have evolved various potential mechanisms to surmount the adverse effects of heavy metal toxicity. Plants possess low molecular weight compounds containing sulfhydryl groups (-SH that actively react with toxic metals. For instance, glutathione (γ-Glu-Cys-Gly is a sulfur-containing tripeptide thiol and a substrate of cysteine-rich phytochelatins (γ-Glu-Cys2–11-Gly (PCs. Phytochelatins react with heavy metal ions by glutathione S-transferase in the cytosol and afterwards they are sequestered into the vacuole for degradation. Furthermore, heavy metals induce reactive oxygen species (ROS, which directly or indirectly influence metabolic processes. Reduced glutathione (GSH attributes as an antioxidant and participates to control ROS during stress. Maintenance of the GSH/GSSG ratio is important for cellular redox balance, which is crucial for the survival of the plants. In this context, sulfurtransferases (Str, also called rhodaneses, comprise a group of enzymes widely distributed in all phyla, paving the way for the transfer of a sulfur atom from suitable sulfur donors to nucleophilic sulfur acceptors, at least in vitro. The best characterized in vitro reaction is the transfer of a sulfane sulfur atom from thiosulfate to cyanide, leading to the formation of sulfite and thiocyanate. Plants as well as other organisms have multi-protein families (MPF of Str. Despite the presence of Str activities in many living organisms, their physiological role has not been clarified unambiguously. In mammals, these proteins are involved in the elimination of cyanide released from cyanogenic compounds. However, their ubiquity suggests additional physiological functions. Furthermore, it is speculated that a member of the Str family acts as arsenate reductase (AR and is involved in arsenate detoxification. In summary, the role of Str in detoxification processes is still not well understood but seems to be a major function in the organism.

  5. Synthesis of calix[4]arene-grafted magnetite nanoparticles and Evaluation of their arsenate as well as dichromate removal efficiency

    Energy Technology Data Exchange (ETDEWEB)

    Sayin, Serkan; Ozcan, Fatih; Yilmaz, Mustafa; Cengeloglu, Yunus [Department of Chemistry, Selcuk University, Konya (Turkey); Tor, Ali [Department of Environmental Engineering, Selcuk University, Konya (Turkey); Memon, Shahabuddin [National Center of Excellence in Analytical Chemistry, University of Sindh, Jamshoro (Pakistan)

    2010-07-15

    In this study, 5,17-bis-[(4-benzylpiperidine)methyl]-25,26,27,28-tetrahydroxy-calix[4]arene (3) has been prepared by the treatment of calix[4]arene with a secondary amine (4-benzylpiperidine) and formaldehyde by means of Mannich reaction. The prepared Mannich base (3) has been grafted onto [3-(2,3-epoxypropoxy)-propyl]-trimethoxysilane-modified Fe{sub 3}O{sub 4} magnetite nanoparticles (EPPTMS-MN) in order to obtain 5,17-bis-[(4-benzylpiperidine)methyl]-25,26,27,28-tetrahydroxy calix[4]arene-grafted EPPTMS-MN (BP-calix[4]arene-grafted Fe{sub 3}O{sub 4}). All new compounds were characterized by a combination of FTIR and {sup 1}H-NMR analyses. The morphology of the magnetic nanoparticles was examined by transmission electron microscopy. Moreover, the studies regarding the removal of arsenate and dichromate ions from the aqueous solutions were also carried out by using 5,17-bis-[(4-benzylpiperidine)methyl]-25,26,27,28-tetrahydroxy-calix[4]arene in liquid-liquid extraction and BP-calix[4]arene-grafted Fe{sub 3}O{sub 4} (4) in solid-liquid extraction experiments. The extraction results indicated that 3 is protonated at proton-switchable binding sites in acidic conditions. Hence, facilitating binding of arsenate and dichromate is resulted from both electrostatic interactions and hydrogen bonding. To understand the selectivity of 3, the retention of dichromate anions in the presence of Cl{sup -}, NO{sub 3}{sup -}, and SO{sub 4}{sup 2-} anions at pH 1.5 was also examined. (Abstract Copyright [2010], Wiley Periodicals, Inc.)

  6. Removal of arsenate and 17alpha-ethinyl estradiol (EE2) by iron (hydr)oxide modified activated carbon fibers.

    Science.gov (United States)

    Hristovski, Kiril D; Nguyen, Hanhphuc; Westerhoff, Paul K

    2009-03-01

    Activated carbon fibers (ACF) were modified with iron (hydr)oxide and studied to determine their suitability to remove arsenate and 17alpha -ethinyl estradiol (EE2) from water. Two synthesis methods, one involving aqueous KMnO(4) pretreatment followed by Fe(II) treatment, and the other involving reaction with Fe(III) in an organic solvent followed by NaOH treatment, were used to produce modified ACF media containing 5.9% and 8.4% iron by dry weight, respectively. Scanning electron microscopy (SEM) and Electron dispersion X-ray (EDX) techniques indicated slightly higher iron content near the outer edges of the fibers. Pseudo-equilibrium batch test experimental data at pH = 7.0 +/- 0.1 in 5 mM NaHCO(3) buffered ultrapure water containing approximately 100 micro g(As)/L and approximately 500 micro gEE2/L were fitted with the Freundlich isotherm model (q = K x C(E)(1/n)). The adsorption capacity parameters (K) were approximately 2586 (micro gAs/gFe)(L/micro gAs)(1/n) and approximately 425 (micro gAs/gFe)(L/micro gAs)(1/n)), respectively, for the KMnO(4)/Fe(II) and Fe(III)/NaOH treated media. The KMnO(4)/Fe(II) media exhibited a lower adsorption capacity at 99% EE2 removal than did the Fe(III)/NaOH treated media (1.3 mgEE2/g -dry -media vs. 1.8 mgEE2/g -dry -media). The arsenate adsorption intensity parameters (1/n) for both modified ACF media were < 0.29, implying very favorable adsorption, which suggests that this type of media may be suitable for single point -of -use applications in which arsenic and organic co-contaminants require simultaneous removal and the depth of the packed bed is the key factor.

  7. Decolorization of textile azo dye and Congo red by an isolated strain of the dissimilatory manganese-reducing bacterium Shewanella xiamenensis BC01.

    Science.gov (United States)

    Ng, I-Son; Chen, Tingting; Lin, Rong; Zhang, Xia; Ni, Chao; Sun, Dongzhe

    2014-03-01

    Shewanella xiamenensis BC01 (SXM) was isolated from sediment collected off Xiamen, China and was identified based on the phylogenetic tree of 16S rRNA sequences and the gyrB gene. This strain showed high activity in the decolorization of textile azo dyes, especially methyl orange, reactive red 198, and recalcitrant dye Congo red, decolorizing at rates of 96.2, 93.0, and 87.5%, respectively. SXM had the best performance for the specific decolorization rate (SDR) of azo dyes compared to Proteus hauseri ZMd44 and Aeromonas hydrophila NIU01 strains and had an SDR similar to Shewanella oneidensis MR-1 in Congo red decolorization. Luria-Bertani medium was the optimal culture medium for SXM, as it reached a density of 4.69 g-DCW L(-1) at 16 h. A mediator (manganese) significantly enhanced the biodegradation and flocculation of Congo red. Further analysis with UV-VIS, Fourier Transform Infrared spectroscopy, and Gas chromatography-mass spectrometry demonstrated that Congo red was cleaved at the azo bond, producing 4,4'-diamino-1,1'-biphenyl and 1,2'-diamino naphthalene 4-sulfonic acid. Finally, SEM results revealed that nanowires exist between the bacteria, indicating that SXM degradation of the azo dyes was coupled with electron transfer through the nanowires. The purpose of this work is to explore the utilization of a novel, dissimilatory manganese-reducing bacterium in the treatment of wastewater containing azo dyes.

  8. K[AsW2O9], the first member of the arsenate-tungsten bronze family: Synthesis, structure, spectroscopic and non-linear optical properties

    Science.gov (United States)

    Alekseev, Evgeny V.; Felbinger, Olivier; Wu, Shijun; Malcherek, Thomas; Depmeier, Wulf; Modolo, Giuseppe; Gesing, Thorsten M.; Krivovichev, Sergey V.; Suleimanov, Evgeny V.; Gavrilova, Tatiana A.; Pokrovsky, Lev D.; Pugachev, Alexey M.; Surovtsev, Nikolay V.; Atuchin, Victor V.

    2013-08-01

    K[AsW2O9], prepared by high-temperature solid-state reaction, is the first member of the arsenate-tungsten bronze family. The structure of K[AsW2O9] is based on a 3-dimensional (3D) oxotungstate-arsenate framework with the non-centrosymmetric P212121 space group, a=4.9747(3) Å, b=9.1780(8) Å, c=16.681(2) Å. The material was characterized using X-ray diffraction, scanning electron microscopy (SEM), differential scanning calorimetry (DSC), Raman and infrared (IR) spectroscopic techniques. The results of DSC demonstrate that this phase is stable up to 1076 K. Second harmonic generation (SHG) measurements performed on a powder sample demonstrate noticeable (0.1 of LiIO3) non-linear optical (NLO) activity.

  9. Not Just a Poison: Microbes That Derive Energy From Arsenic and Their Linkages to the C, N, and S Cycles.

    Science.gov (United States)

    Falkowski, P. G.; Follows, M.; Fennel, K.; Oremland, R. S.

    2003-12-01

    Elements that are abundant in the Earth's crust and the microbes that derive energy from them have been the focus of much research in geomicrobiology. However, some trace elements also have significant biogeochemical cycles that are mediated by microorganisms, but the wider implications of these phenomena have generally been overlooked. This has been the case for arsenic. Arsenic is a toxicant owing to its action as an analog of its Group VB neighbor phosphorous. However, a surprising finding was that a wide diversity of anaerobic prokaryotes gain energy for growth by using arsenate as their electron acceptor, and that they are broadly distributed in nature. They carry out the dissimilatory reduction of arsenate to arsenite while oxidizing organic matter (or hydrogen). Since the electrochemical potential of the arsenate/arsenite couple is 60 mV, it acts as an oxidant of more reduced species like sulfide (- 220 mV). Some arsenate respirers oxidize sulfide, and in doing so fix CO2 into cellular material. Arsenite can be oxidized back to arsenate by aerobic chemoautotrophic microorganisms, or by anaerobes that use nitrate (440 mv). In addition, heterotrophic arsenate-respirers can carry out the reverse reaction, especially in arsenic rich environments like Mono Lake. The possible evolutionary significance of these phenomena and speculation about their occurrence elsewhere in the Solar System will be discussed.

  10. Draft Genome Sequence of Ochrobactrum pseudogrignonense Strain CDB2, a Highly Efficient Arsenate-Resistant Soil Bacterium from Arsenic-Contaminated Cattle Dip Sites.

    Science.gov (United States)

    Yang, Yiren; Yu, Xuefei; Zhang, Ren

    2013-04-18

    We report the 4.97-Mb draft genome sequence of a highly efficient arsenate-resistant bacterium, Ochrobactrum sp. strain CDB2. It contains a novel arsenic resistance (ars) operon (arsR-arsC1-ACR3-arsC2-arsH-mfs) and two non-operon-associated ars genes, arsC3 and arsB. The genome information will aid in the understanding of the arsenic resistance mechanism of this and other bacterial species.

  11. Draft Genome Sequence of Ochrobactrum pseudogrignonense Strain CDB2, a Highly Efficient Arsenate-Resistant Soil Bacterium from Arsenic-Contaminated Cattle Dip Sites

    OpenAIRE

    Yang, Yiren; Yu, Xuefei; Zhang, Ren

    2013-01-01

    We report the 4.97-Mb draft genome sequence of a highly efficient arsenate-resistant bacterium, Ochrobactrum sp. strain CDB2. It contains a novel arsenic resistance (ars) operon (arsR-arsC1-ACR3-arsC2-arsH-mfs) and two non-operon-associated ars genes, arsC3 and arsB. The genome information will aid in the understanding of the arsenic resistance mechanism of this and other bacterial species.

  12. Towards a selective adsorbent for arsenate and selenite in the presence of phosphate: Assessment of adsorption efficiency, mechanism, and binary separation factors of the chitosan-copper complex.

    Science.gov (United States)

    Yamani, Jamila S; Lounsbury, Amanda W; Zimmerman, Julie B

    2016-01-01

    The potential for a chitosan-copper polymer complex to select for the target contaminants in the presence of their respective competitive ions was evaluated by synthesizing chitosan-copper beads (CCB) for the treatment of (arsenate:phosphate), (selenite:phosphate), and (selenate:sulfate). Based on work by Rhazi et al., copper (II) binds to the amine moiety on the chitosan backbone as a monodentate complex (Type I) and as a bidentate complex crosslinking two polymer chains (Type II), depending on pH and copper loading. In general, the Type I complex exists alone; however, beyond threshold conditions of pH 5.5 during synthesis and a copper loading of 0.25 mol Cu(II)/mol chitosan monomer, the Type I and Type II complexes coexist. Subsequent chelation of this chitosan-copper ligand to oxyanions results in enhanced and selective adsorption of the target contaminants in complex matrices with high background ion concentrations. With differing affinities for arsenate, selenite, and phosphate, the Type I complex favors phosphate chelation while the Type II complex favors arsenate chelation due to electrostatic considerations and selenite chelation due to steric effects. No trend was exhibited for the selenate:sulfate system possibly due to the high Ksp of the corresponding copper salts. Binary separation factors, α12, were calculated for the arsenate-phosphate and selenite-phosphate systems, supporting the mechanistic hypothesis. While, further research is needed to develop a synthesis method for the independent formation of the Type II complexes to select for target contaminants in complex matrices, this work can provide initial steps in the development of a selective adsorbent.

  13. Separation/Preconcentration and Speciation Analysis of Trace Amounts of Arsenate and Arsenite in Water Samples Using Modified Magnetite Nanoparticles and Molybdenum Blue Method

    Directory of Open Access Journals (Sweden)

    Mohammad Ali Karimi

    2014-01-01

    Full Text Available A new, simple, and fast method for the separation/preconcentration and speciation analysis of arsenate and arsenite ions using cetyltrimethyl ammonium bromide immobilized on alumina-coated magnetite nanoparticles (CTAB@ACMNPs followed by molybdenum blue method is proposed. The method is based on the adsorption of arsenate on CTAB@ACMNPs. Total arsenic in different samples was determined as As(V after oxidation of As(III to As(V using potassium permanganate. The arsenic concentration has been determined by UV-Visible spectrometric technique based on molybdenum blue method and amount of As(III was calculated by subtracting the concentration of As(V from total arsenic concentration. MNPs and ACMNPs were characterized by VSM, XRD, SEM, and FT-IR spectroscopy. Under the optimal experimental conditions, the preconcentration factor, detection limit, linear range, and relative standard deviation (RSD of arsenate were 175 (for 350 mL of sample solution, 0.028 μg mL−1, 0.090–4.0 μg mL−1, and 2.8% (for 2.0 μg mL−1, n=7, respectively. This method avoided the time-consuming column-passing process of loading large volume samples in traditional SPE through the rapid isolation of CTAB@ACMNPs with an adscititious magnet. The proposed method was successfully applied to the determination and speciation of arsenic in different water samples and suitable recoveries were obtained.

  14. Ultrasonic assisted arsenate adsorption on solvothermally synthesized calcite modified by goethite, α-MnO2 and goethite/α-MnO2.

    Science.gov (United States)

    Markovski, Jasmina S; Đokić, Veljko; Milosavljević, Milutin; Mitrić, Miodrag; Perić-Grujić, Aleksandra A; Onjia, Antonije E; Marinković, Aleksandar D

    2014-03-01

    A highly porous calcium carbonate (calcite; sorbent 1) was used as a support for modification with α-FeOOH (calcite/goethite; sorbent 2), α-MnO2 (calcite/α-MnO2; sorbent 3) and α-FeOOH/α-MnO2 (calcite/goethite/α-MnO2; sorbent 4) in order to obtain a cheap hybrid materials for simple and effective arsenate removal from aqueous solutions. The adsorption ability of synthesized adsorbents was studied as a function of functionalization methods, pH, contact time, temperature and ultrasonic treatment. Comparison of the adsorptive effectiveness of synthesized adsorbents for arsenate removal, under ultrasound treatment and classical stirring method, has shown better performance of the former one reaching maximum adsorption capacities of 1.73, 21.00, 10.36 and 41.94 mg g(-1), for sorbents 1-4, respectively. Visual MINTEQ equilibrium speciation modeling was used for prediction of pH and interfering ion influences on arsenate adsorption.

  15. Confounding Impacts of Iron Reduction on Arsenic Retention

    Energy Technology Data Exchange (ETDEWEB)

    Tufano, K.J.; Fendorf, S.

    2009-05-26

    A transition from oxidizing to reducing conditions has long been implicated to increase aqueous As concentrations, for which reductive dissolution of iron (hydr)oxides is commonly implicated as the primary culprit. Confounding our understanding of processes controlling As retention, however, is that reductive transformation of ferrihydrite has recently been shown to promote As retention rather than release. To resolve the role iron phases have in regulating arsenic concentrations, here we examine As desorption from ferrihydrite-coated sands presorbed with As(lll); experiments were performed at circumneutral pH under Fe-reducing conditions with the dissimilatory iron reducing bacterium Shewanella putrefaciens strain CN-32 over extended time periods. We reveal that with the initial phase of iron reduction, ferrihydrite undergoes transformation to secondary phases and increases As(lll) retention (relative to abiotic controls). However, with increased reaction time, cessation of the phase transitions and ensuing reductive dissolution result in prolonged release of As(III) to the aqueous phase. Our results suggest that As(lll) retention during iron reduction is temporally dependent on secondary precipitation of iron phases; during transformation to secondary phases, particularly magnetite, As(lll) retention is enhanced even relative to oxidized systems. However, conditions that retard secondary transformation (more stable iron oxides or limited iron reducing bacterial activity), or prolonged anaerobiosis, will lead to both the dissolution of ferric (hydr)oxides and release of As(lll) to the aqueous phase.

  16. Thermodynamic constraints on microbial iron oxide reduction

    Science.gov (United States)

    Bonneville, S.; Behrends, T.; Haese, R.; van Cappellen, P.

    2003-04-01

    Iron oxides are ubiquitous reactive constituents of soils, sediments and aquifers. They exhibit large surface areas which bind trace metals, nutrients and organic molecules. Under suboxic conditions, iron oxides can reductively dissolve via several abiotic and microbial pathways. In particular, they serve as terminal electron acceptors for the oxidation of organic matter by iron reducing bacteria. The aim of our study was to determine the thermodynamic energy yields of dissimilatory iron reduction for different Fe(III) substrates. We used the facultative anaerobic gram-positive bacterium Shewanella putrefaciens as model iron reducing bacterium, with ferrihydrite, hematite, goethite or Fe(III)-salicylate as electron acceptor, and lactate as electron donor. Experiments were conducted in an anaerobic pH-stat batch reactor, equipped with a polarographic electrode to monitor in situ the dissolved ferrous iron activity. The stoichiometry of total Fe(II) production and acid consumption during the experiments indicated that lactate was oxidized to acetate. From the Fe(II) activity and redox potential measurements, free energy yields were calculated for Fe(III) reduction coupled to lactate oxidation. The results showed that the redox potential of the overall reaction was poised by equilibrium between the Fe(III)-substrate and aqueous Fe(II). Hence, the energy yields decreased in the order ferrihydrite > Fe(III)-salicylate > hematite > goethite. Accumulation of Fe(II) in solution only caused small decreases in the energy yields over the course of the experiments. Cessation of iron reduction, which was observed in all experiments, was therefore not due to thermodynamic limitation, but more likely reflected the decline in cell level of activity.

  17. Poverty Reduction

    OpenAIRE

    Ortiz, Isabel

    2007-01-01

    The paper reviews poverty trends and measurements, poverty reduction in historical perspective, the poverty-inequality-growth debate, national poverty reduction strategies, criticisms of the agenda and the need for redistribution, international policies for poverty reduction, and ultimately understanding poverty at a global scale. It belongs to a series of backgrounders developed at Joseph Stiglitz's Initiative for Policy Dialogue.

  18. Total X-ray scattering, EXAFS, and Mössbauer spectroscopy analyses of amorphous ferric arsenate and amorphous ferric phosphate

    Science.gov (United States)

    Mikutta, Christian; Schröder, Christian; Marc Michel, F.

    2014-09-01

    Amorphous ferric arsenate (AFA, FeAsO4·xH2O) is an important As precipitate in a range of oxic As-rich environments, especially acidic sulfide-bearing mine wastes. Its structure has been proposed to consist of small polymers of single corner-sharing FeO6 octahedra (rFe-Fe ∼3.6 Å) to which arsenate is attached as a monodentate binuclear 2C complex ('chain model'). Here, we analyzed the structure of AFA and analogously prepared amorphous ferric phosphates (AFP, FePO4·xH2O) by a combination of high-energy total X-ray scattering, Fe K-edge X-ray absorption spectroscopy, and 57Fe Mössbauer spectroscopy. Pair distribution function (PDF) analysis of total X-ray scattering data revealed that the coherently scattering domain size of AFA and AFP is about 8 Å. The PDFs of AFA lacked Fe-Fe pair correlations at r ∼3.6 Å indicative of single corner-sharing FeO6 octahedra, which strongly supports a local scorodite (FeAsO4·2H2O) structure. Likewise, the PDFs and Fe K-edge extended X-ray absorption fine structure data of AFP were consistent with a local strengite (FePO4·2H2O) structure of isolated FeO6 octahedra being corner-linked to PO4 tetrahedra (rFe-P = 3.25(1) Å). Mössbauer spectroscopy analyses of AFA and AFP indicated a strong superparamagnetism. While AFA only showed a weak onset of magnetic hyperfine splitting at 5 K, magnetic ordering of AFP was completely absent at this temperature. Mössbauer spectroscopy may thus offer a convenient way to identify and quantify AFA and AFP in mineral mixtures containing poorly crystalline Fe(III)-oxyhydroxides. In summary, our results imply a close structural relationship between AFA and AFP and suggest that these amorphous materials serve as templates for the formation of scorodite and strengite (phosphosiderite) in strongly acidic low-temperature environments.

  19. Denitrification and Nitrate Reduction to Ammonium in Taihu Lake and Yellow sea Inter—Tidal Marine Sediments

    Institute of Scientific and Technical Information of China (English)

    YINSHIXUE; SHENQIRONG; 等

    1999-01-01

    Denitrification and nitrate reduction to ammonium in Taihu Lake and Yellow Sea inter-tidal marine sediments were studied.The sediment samples were made slurry containing 150g dry matter per liter.Various of glucose-C to nitrate-N.Acetylene inhibition technique was applied to measure denitrification in the slurres,All samples were incubated anaerobically under argon atmosphere,Data showed that Taihu Lake sediment produced more N2O than marine sediment,Denitrification potential was higher in Taihu Lake sediment than in marine one,Glucose added increase denitrification activity but not the denitrification potential of the sediments.Dissimilatory nitrate reduction to ammonium seemed to occur in marine sediment,but not in freshwater one.When the marine sediment was treated with 25mmol L-1 glucose,its denitrification potentail,as indicated by maximum N2O production by acetylene blockage,was lower than that treated with no or 2.5mmol L-1 glucose.Acetylene was suspected to have inhibitory effect on dissimilatory nitrate reduction to ammonium.

  20. Molecular characterization of Alr1105 a novel arsenate reductase of the diazotrophic cyanobacterium Anabaena sp. PCC7120 and decoding its role in abiotic stress management in Escherichia coli.

    Science.gov (United States)

    Pandey, Sarita; Shrivastava, Alok K; Rai, Rashmi; Rai, Lal Chand

    2013-11-01

    This paper constitutes the first report on the Alr1105 of Anabaena sp. PCC7120 which functions as arsenate reductase and phosphatase and offers tolerance against oxidative and other abiotic stresses in the alr1105 transformed Escherichia coli. The bonafide of 40.8 kDa recombinant GST+Alr1105 fusion protein was confirmed by immunoblotting. The purified Alr1105 protein (mw 14.8 kDa) possessed strong arsenate reductase (Km 16.0 ± 1.2 mM and Vmax 5.6 ± 0.31 μmol min⁻¹ mg protein⁻¹) and phosphatase activity (Km 27.38 ± 3.1 mM and Vmax 0.077 ± 0.005 μmol min⁻¹ mg protein⁻¹) at an optimum temperature 37 °C and 6.5 pH. Native Alr1105 was found as a monomeric protein in contrast to its homologous Synechocystis ArsC protein. Expression of Alr1105 enhanced the arsenic tolerance in the arsenate reductase mutant E. coli WC3110 (∆arsC) and rendered better growth than the wild type W3110 up to 40 mM As (V). Notwithstanding above, the recombinant E. coli strain when exposed to CdCl₂, ZnSO₄, NiCl₂, CoCl₂, CuCl₂, heat, UV-B and carbofuron showed increase in growth over the wild type and mutant E. coli transformed with the empty vector. Furthermore, an enhanced growth of the recombinant E. coli in the presence of oxidative stress producing chemicals (MV, PMS and H₂O₂), suggested its protective role against these stresses. Appreciable expression of alr1105 gene as measured by qRT-PCR at different time points under selected stresses reconfirmed its role in stress tolerance. Thus the Alr1105 of Anabaena sp. PCC7120 functions as an arsenate reductase and possess novel properties different from the arsenate reductases known so far.

  1. Removal of arsenate from aqueous solution by nanocrystalline Mg/Al layered double hydroxide: sorption characteristics, prospects, and challenges.

    Science.gov (United States)

    Goh, K H; Lim, T T; Dong, Z L

    2010-01-01

    Removal of arsenate (As(V)) from aqueous solution using both nanocrystalline and coprecipitated Mg/Al layered double hydroxides (LDHs) was examined under different sorption/desorption conditions. The surface area, pore volume, and pore size of the nanocrystalline LDH were significantly higher than those of the coprecipitated LDH, thus resulting in a higher As(V) sorption maximum than the coprecipitated LDH. The calculated activation energy (E(a)) value was 24.7 kJ/mol, suggesting the occurrence of anion exchange process for As(V) removal by the nanocrystalline LDH. The predominance of anion exchange process was further supported by the investigation of ionic strength effect, and XRD and FTIR analyses. The effect of aqueous matrix on As(V) sorption by the nanocrystalline LDH was found to increase in the order of nitrate nanocrystalline LDH besides the predominant anion exchange process. Prospects and challenges for practical application of the nanocrystalline LDH were also discussed in the latter part of this study.

  2. Transcriptomics profiling of Indian mustard (Brassica juncea) under arsenate stress identifies key candidate genes and regulatory pathways.

    Science.gov (United States)

    Srivastava, Sudhakar; Srivastava, Ashish K; Sablok, Gaurav; Deshpande, Tejaswini U; Suprasanna, Penna

    2015-01-01

    Arsenic (As) is a non-essential element, a groundwater pollutant, whose uptake by plants produces toxic effects. The use of As-contaminated groundwater for irrigation can affect the crop productivity. Realizing the importance of the Brassica juncea as a crop plant in terms of oil-yield, there is a need to unravel mechanistic details of response to As stress and identify key functional genes and pathways. In this research, we studied time-dependent (4-96 h) transcriptome changes in roots and shoots of B. juncea under arsenate [As(V)] stress using Agilent platform. Among the whole transcriptome profiled genes, a total of 1,285 genes showed significant change in expression pattern upon As(V) exposure. The differentially expressed genes were categorized to various signaling pathways including hormones (jasmonate, abscisic acid, auxin, and ethylene) and kinases. Significant effects were also noticed on genes related to sulfur, nitrogen, CHO, and lipid metabolisms along with photosynthesis. Biochemical assays were conducted using specific inhibitors of glutathione and jasmonate biosynthesis, and kinases. The inhibitor studies revealed interconnection among sulfur metabolism, jasmonate, and kinase signaling pathways. In addition, various transposons also constituted a part of the altered transcriptome. Lastly, we profiled a set of key functional up- and down-regulated genes using real-time RT-PCR, which could act as an early indicators of the As stress.

  3. Exergy analysis of the Chartherm process for energy valorization and material recuperation of chromated copper arsenate (CCA) treated wood waste.

    Science.gov (United States)

    Bosmans, A; Auweele, M Vanden; Govaerts, J; Helsen, L

    2011-04-01

    The Chartherm process (Thermya, Bordeaux, France) is a thermochemical conversion process to treat chromated copper arsenate (CCA) impregnated wood waste. The process aims at maximum energy valorization and material recuperation by combining the principles of low-temperature slow pyrolysis and distillation in a smart way. The main objective of the exergy analysis presented in this paper is to find the critical points in the Chartherm process where it is necessary to apply some measures in order to reduce exergy consumption and to make energy use more economic and efficient. It is found that the process efficiency can be increased with 2.3-4.2% by using the heat lost by the reactor, implementing a combined heat and power (CHP) system, or recuperating the waste heat from the exhaust gases to preheat the product gas. Furthermore, a comparison between the exergetic performances of a 'chartherisation' reactor and an idealized gasification reactor shows that both reactors destroy about the same amount of exergy (i.e. 3500kWkg(wood)(-1)) during thermochemical conversion of CCA-treated wood. However, the Chartherm process possesses additional capabilities with respect to arsenic and tar treatment, as well as the extra benefit of recuperating materials.

  4. Photosynthesis is induced in rice plants that associate with arbuscular mycorrhizal fungi and are grown under arsenate and arsenite stress.

    Science.gov (United States)

    de Andrade, Sara Adrian Lopez; Domingues, Adilson Pereira; Mazzafera, Paulo

    2015-09-01

    The metalloid arsenic (As) increases in agricultural soils because of anthropogenic activities and may have phytotoxic effects depending on the available concentrations. Plant performance can be improved by arbuscular mycorrhiza (AM) association under challenging conditions, such as those caused by excessive soil As levels. In this study, the influence of AM on CO2 assimilation, chlorophyll a fluorescence, SPAD-chlorophyll contents and plant growth was investigated in rice plants exposed to arsenate (AsV) or arsenite (AsIII) and inoculated or not with Rhizophagus irregularis. Under AsV and AsIII exposure, AM rice plants had greater biomass accumulation and relative chlorophyll content, increased water-use efficiency, higher carbon assimilation rate and higher stomatal conductance and transpiration rates than non-AM rice plants did. Chlorophyll a fluorescence analysis revealed significant differences in the response of AM-associated and -non-associated plants to As. Mycorrhization increased the maximum and actual quantum yields of photosystem II and the electron transport rate, maintaining higher values even under As exposure. Apart from the negative effects of AsV and AsIII on the photosynthetic rates and PSII efficiency in rice leaves, taken together, these results indicate that AM is able to sustain higher rice photosynthesis efficiency even under elevated As concentrations, especially when As is present as AsV.

  5. Determination of arsenate in water by anion selective membrane electrode using polyurethane–silica gel fibrous anion exchanger composite

    Energy Technology Data Exchange (ETDEWEB)

    Khan, Asif Ali, E-mail: asifkhan42003@yahoo.com; Shaheen, Shakeeba, E-mail: shakeebashaheen@ymail.com

    2014-01-15

    Highlights: • PU–Si gel is new anion exchanger material synthesized and characterized. • This material used as anion exchange membrane is applied for electroanalytical studies. • The method for detection and determination of AsO{sub 4}{sup 3−} in traces amounts discussed. • The results are also verified from arsenic analyzer. -- Abstract: Polyurethane (PU)–silica (Si gel) based fibrous anion exchanger composites were prepared by solid–gel polymerization of polyurethane in the presence of different amounts of silica gel. The formation of PU–Si gel fibrous anion exchanger composite was characterized by Fourier transform infra-red spectroscopy (FTIR), X-ray diffraction (XRD), thermogravimetric analysis (TGA-DTA), scanning electron microscopy (SEM) and elemental analysis. The membrane having a composition of 5:3 (PU:Si gel) shows best results for water content, porosity, thickness and swelling. Our studies show that the present ion selective membrane electrode is selective for arsenic, having detection limit (1 × 10{sup −8} M to 1 × 10{sup −1} M), response time (45 s) and working pH range (5–8). The selectivity coefficient values for interfering ions indicate good selectivity for arsenate (AsO{sub 4}{sup 3−}) over interfering anions. The accuracy of the detection limit results was compared by PCA-Arsenomat.

  6. Determination of arsenate in water by anion selective membrane electrode using polyurethane-silica gel fibrous anion exchanger composite.

    Science.gov (United States)

    Khan, Asif Ali; Shaheen, Shakeeba

    2014-01-15

    Polyurethane (PU)-silica (Si gel) based fibrous anion exchanger composites were prepared by solid-gel polymerization of polyurethane in the presence of different amounts of silica gel. The formation of PU-Si gel fibrous anion exchanger composite was characterized by Fourier transform infra-red spectroscopy (FTIR), X-ray diffraction (XRD), thermogravimetric analysis (TGA-DTA), scanning electron microscopy (SEM) and elemental analysis. The membrane having a composition of 5:3 (PU:Si gel) shows best results for water content, porosity, thickness and swelling. Our studies show that the present ion selective membrane electrode is selective for arsenic, having detection limit (1×10(-8)M to 1×10(-1)M), response time (45s) and working pH range (5-8). The selectivity coefficient values for interfering ions indicate good selectivity for arsenate (AsO4(3-)) over interfering anions. The accuracy of the detection limit results was compared by PCA-Arsenomat.

  7. Arsenate and arsenite exposure modulate antioxidants and amino acids in contrasting arsenic accumulating rice (Oryza sativa L.) genotypes.

    Science.gov (United States)

    Dave, Richa; Tripathi, Rudra Deo; Dwivedi, Sanjay; Tripathi, Preeti; Dixit, Garima; Sharma, Yogesh Kumar; Trivedi, Prabodh Kumar; Corpas, Francisco J; Barroso, Juan B; Chakrabarty, Debasis

    2013-11-15

    Carcinogenic arsenic (As) concentrations are found in rice due to irrigation with contaminated groundwater in South-East Asia. The present study evaluates comparative antioxidant property and specific amino acid accumulation in contrasting rice genotypes corresponding to differential As accumulation during arsenate (As(V)) and arsenite (As(III)) exposures. The study was conducted on two contrasting As accumulating rice genotypes selected from 303 genotype accessions, in hydroponic conditions. Maximum As accumulation was up to 1181 μg g(-1) dw in the roots of high As accumulating genotype (HARG), and 89 μg g(-1) dw in low As accumulating genotype (LARG) under As(III) exposures. The inorganic As was correlated more significantly upon exposures to As(III) than As(V). In the presence of As(V) various antioxidant enzymes guiacol peroxidase (GPX), ascorbate peroxidase (APX) and superoxide dismutase (SOD) were highly stimulated in HARG. The stress responsive amino acids proline, cysteine, glycine, glutamic acid and methionine showed higher accumulation in HARG than LARG. A clear correlation was found between stress responsive amino acids, As accumulation and antioxidative response. The comparisons between the contrasting genotypes helped to determine the significance of antioxidants and specific amino acid response to As stress.

  8. Effects of arsenate (AS5+) on growth and production of glutathione (GSH) and phytochelatins (PCS) in Chlorella vulgaris.

    Science.gov (United States)

    Jiang, Ying; Purchase, Diane; Jones, Huw; Garelick, Hemda

    2011-09-01

    The effect of arsenate (As5+) on growth and chlorophyll a production in Chlorella vulgaris, its removal by C. vulgaris and the role of glutathione (GSH) and phytochelatins (PCs) were investigated. C. vulgaris was tolerant to As5+ at up to 200 mg/L and was capable of consistently removing around 70% of the As5+ present in growth media over a wide range of exposure concentrations. Spectral analysis revealed that PCs and their arsenic-combined complexes were absent, indicating that the high bioaccumulation and tolerance to arsenic observed was not due to intracellular chelation. In contrast, GSH was found in all samples ranging from 0.8 mg/L in the control to 6.5 mg/L in media containing 200 mg/L As5+ suggesting that GSH plays a more prominent role in the detoxification of As5+ in C. vulgaris than PC. At concentrations below 100 mg/L cell surface binding and other mechanisms may play the primary role in As5+ detoxification, whereas above this concentration As5+ begins to accumulate inside the algal cells and activates a number of intracellular cell defense mechanisms, such as increased production of GSH. The overall findings complement field studies which suggest C. vulgaris as an increasingly promising low cost As phytoremediation method for developing countries.

  9. Effects of arsenate, chromate, and sulfate on arsenic and chromium uptake and translocation by arsenic hyperaccumulator Pteris vittata L.

    Science.gov (United States)

    de Oliveira, Letúzia Maria; Ma, Lena Q; Santos, Jorge A G; Guilherme, Luiz R G; Lessl, Jason T

    2014-01-01

    We investigated effects of arsenate (AsV), chromate (CrVI) and sulfate on As and Cr uptake and translocation by arsenic hyperaccumulator Pteris vittata (PV), which was exposed to AsV, CrVI and sulfate at 0, 0.05, 0.25 or 1.25 mM for 2-wk in hydroponic system. PV was effective in accumulating large amounts of As (4598 and 1160 mg/kg in the fronds and roots at 0.05 mM AsV) and Cr (234 and 12,630 mg/kg in the fronds and roots at 0.05 mM CrVI). However, when co-present, AsV and CrVI acted as inhibitors, negatively impacting their accumulation in PV. Arsenic accumulation in the fronds was reduced by 92% and Cr by 26%, indicating reduced As and Cr translocation. However, addition of sulfate increased uptake and translocation of As by 26-28% and Cr by 1.63 fold. This experiment demonstrated that As and Cr inhibited each other in uptake and translocation by PV but sulfate enhanced As and Cr uptake and translocation by PV.

  10. Natural variations in expression of regulatory and detoxification related genes under limiting phosphate and arsenate stress in Arabidopsis thaliana

    Directory of Open Access Journals (Sweden)

    Tapsi eShukla

    2015-10-01

    Full Text Available Abiotic stress including nutrient deficiency and heavy metal toxicity severely affects plant growth, development, and productivity. Genetic variations within and in between species are one of the important factors in establishing interactions and responses of plants with the environment. In the recent past, natural variations in Arabidopsis thaliana have been used to understand plant development and response towards different stresses at genetic level. Phosphorus (Pi deficiency negatively affects plant growth and metabolism and modulates expression of the genes involved in Pi homeostasis. Arsenate, As(V, a chemical analogue of Pi, is taken up by the plants via phosphate transport system. Studies suggest that during Pi deficiency, enhanced As(V uptake leads to increased toxicity in plants. Here, the natural variations in Arabidopsis have been utilized to study the As(V stress response under limiting Pi condition. The primary root length was compared to identify differential response of three Arabidopsis accessions (Col-0, Sij-1 and Slavi-1 under limiting Pi and As(V stress. To study the molecular mechanisms responsible for the differential response, comprehensive expression profiling of the genes involved in uptake, detoxification and regulatory mechanisms was carried out. Analysis suggests genetic variation-dependent regulatory mechanisms may affect differential response of Arabidopsis natural variants towards As(V stress under limiting Pi condition. Therefore, it is hypothesized that detailed analysis of the natural variations under multiple stress conditions might help in the better understanding of the biological processes involved in stress tolerance and adaptation.

  11. Alternative nitrate reduction pathways in experimentally fertilized New England salt marshes

    DEFF Research Database (Denmark)

    Uldahl, Anne; Banta, Gary Thomas; Boegh, Eva;

    Nitrate present or generated in any benthic ecosystem can be reduced by a number of microbial pathways, most notably denitrification, anaerobic ammonium oxidation (anammox) and dissimilatory nitrate reduction to ammonium (DNRA). The first two processes remove of biologically available N from...... the ecosystem in the form of gaseous N2, while the last process transforms of NO3- to another biologically available form, NH4+, and thus merely recycles N. Salt marshes are important ecosystems for the cycling, retention and removal of biologically available N transported from land to the oceans. We used...... ongoing ecosystem level nutrient additions experiments in two New England salt marshes, Plum Island Sound (NO3- additions since 2003) and Great Sippewissett Marsh (fertilizer additions since the 1970's) to examine the relative importance of these NO3- reduction pathways in salt marshes. Sediments from...

  12. Subsurface nitrate reduction under wetlands takes place in narrow superficial zones

    DEFF Research Database (Denmark)

    dos Santos Ribas, Osmar; Calderer, M.; Marti, Vicens

    2017-01-01

    This study aims to investigate the depth distribution of the Nitrate Reduction Potential (NRP) on a natural and a re-established wetland. The obtained NRP provides a valuable data of the driving factors affecting denitrification, the Dissimilatory Nitrate Reduction to Ammonium (DNRA) process......-first order rate constant (k) from where NRPs were obtained. NR took place in a narrow superficial zone showing a dropping natural logarithmic trend along depth. The main driving factor of denitrification, besides depth, was OM. Although, DOC and LOI could not express by themselves and absolute correlation...... with NRP, high amounts of DOC ensured enough quantity and quality of labile OM for NR. Besides, high concentration of LOI but a scarce abundance of DOC failed to drive NR. DNRA was only important in superficial samples with high contents of OM. Lastly, the high NRP of the re-established wetland confirms...

  13. INVESTIGATION OF THE TRANSFORMATION OF URANIUM UNDER IRON-REDUCING CONDITIONS: REDUCTION OF UVI BY BIOGENIC FEII/FEIII HYDROXIDE (GREEN RUST)

    Energy Technology Data Exchange (ETDEWEB)

    O' Loughlin, Edward J.; Scherer, Michelle M.; Kemner, Kenneth M.

    2006-12-31

    The recent identification of green rusts (GRs) as products of the reduction of FeIII oxyhydroxides by dissimilatory iron-reducing bacteria, coupled with the ability of synthetic (GR) to reduce UVI species to insoluble UO2, suggests that biogenic green rusts (BioGRs) may play an important role in the speciation (and thus mobility) of U in FeIII-reducing environments. The objective of our research was to examine the potential for BioGR to affect the speciation of U under FeIII-reducing conditions. To meet this objective, we designed and executed a hypothesis-driven experimental program to identify key factors leading to the formation of BioGRs as products of dissimilatory FeIII reduction, to determine the key factors controlling the reduction of UVI to UIV by GRs, and to identify the resulting U-bearing mineral phases. The results of this research significantly increase our understanding of the coupling of biotic and abiotic processes with respect to the speciation of U in iron-reducing environments. In particular, the reduction of UVI to UIV by BioGR with the subsequent formation of U-bearing mineral phases may be effective for immobilizing U in suboxic subsurface environments. This information has direct applications to contaminant transport modeling and bioremediation engineering for natural or enhanced in situ remediation of subsurface contamination.

  14. Metal Reduction and Iron Biomineralization by a Psychrotolerant Fe(III)-Reducing Bacterium, Shewanella sp. Strain PV-4

    Energy Technology Data Exchange (ETDEWEB)

    Roh, Yul; Gao, Haichun; Vali, Hojatollah; Kennedy, David W.; Yang, Zamin; Gao, Weimin; Dohnalkova, Alice; Stapleton, Raymond D.; Moon, Ji-Won; Phelps, T. J.; Fredrickson, Jim K.; Zhou, Jizhong

    2006-05-01

    A marine psychrotolerant, dissimilatory Fe(III)-reducing bacterium, Shewanella sp. strain PV-4, from the microbial mat at a hydrothermal vent of Loihi Seamount in the Pacific Ocean has been further characterized, with emphases on metal reduction and iron biomineralization. The strain is able to reduce metals such as Fe(III), Co(III), Cr(VI), Mn(IV), and U(VI) as electron acceptors while using lactate, formate, pyruvate, or hydrogen as an electron donor. Growth during iron reduction occurred over the pH range of 7.0 to 8.9, a sodium chloride range of 0.05 to 5%, and a temperature range of 0 to 37°C, with an optimum growth temperature of 18°C. Unlike mesophilic dissimilatory Fe(III)-reducing bacteria, which produce mostly superparamagnetic magnetite (<35 nm), this psychrotolerant bacterium produces well-formed single-domain magnetite (>35 nm) at temperatures from 18 to 37°C. The genome size of this strain is about 4.5 Mb. Strain PV-4 is sensitive to a variety of commonly used antibiotics except ampicillin and can acquire exogenous DNA (plasmid pCM157) through conjugation.

  15. Metal Reduction and Iron Biomineralization by a Psychrotolerant Fe(III)-Reducing Bacterium, Shewanella sp. Strain PV-4

    Energy Technology Data Exchange (ETDEWEB)

    Roh, Yul; Gao, Haichun; Vali, Hojatollah; Kennedy, David W.; Yang, Zamin; Gao, Weimin; Dohnalkova, Alice; Stapleton, Raymond D.; Moon, Ji-Won; Phelps, Tommy J.; Fredrickson, Jim K.; Zhou, Jizhong

    2006-09-01

    A marine psychrotolerant, dissimilatory Fe(III)-reducing bacterium, Shewanella sp. strain PV-4, from the microbial mat at a hydrothermal vent of Loihi Seamount in the Pacific Ocean has been further characterized, with emphases on metal reduction and iron biomineralization. The strain is able to reduce metals such as Fe(III), Co(III), Cr(VI), Mn(IV), and U(VI) as electron acceptors while using lactate, formate, pyruvate, or hydrogen as an electron donor. Growth during iron reduction occurred over the pH range of 7.0 to 8.9, a sodium chloride range of 0.05 to 5%, and a temperature range of 0 to 37 C, with an optimum growth temperature of 18 C. Unlike mesophilic dissimilatory Fe(III)-reducing bacteria, which produce mostly superparamagnetic magnetite (<35 nm), this psychrotolerant bacterium produces well-formed single-domain magnetite (>35 nm) at temperatures from 18 to 37 C. The genome size of this strain is about 4.5 Mb. Strain PV-4 is sensitive to a variety of commonly used antibiotics except ampicillin and can acquire exogenous DNA (plasmid pCM157) through conjugation.

  16. Behavioural and physiological responses of Gammarus pulex exposed to cadmium and arsenate at three temperatures: individual and combined effects.

    Directory of Open Access Journals (Sweden)

    Céline Vellinger

    Full Text Available This study aimed at investigating both the individual and combined effects of cadmium (Cd and arsenate (AsV on the physiology and behaviour of the Crustacean Gammarus pulex at three temperatures (5, 10 and 15 °C. G. pulex was exposed during 96 h to (i two [Cd] alone, (ii two [AsV] alone, and (iii four combinations of [Cd] and [AsV] to obtain a complete factorial plane. After exposure, survival, [AsV] or [Cd] in body tissues, behavioural (ventilatory and locomotor activities and physiological responses (iono-regulation of [Na(+] and [Cl(-] in haemolymph were examined. The interactive effects (antagonistic, additive or synergistic of binary mixtures were evaluated for each tested temperature using a predictive model for the theoretically expected interactive effect of chemicals. In single metal exposure, both the internal metal concentration in body tissues and the mortality rate increased along metallic gradient concentration. Cd alone significantly impaired both [Na(+] and [Cl(-] while AsV alone had a weak impact only on [Cl(-]. The behavioural responses of G. pulex declined with increasing metal concentration suggesting a reallocation of energy from behavioural responses to maintenance functions. The interaction between AsV and Cd was considered as 'additive' for all the tested binary mixtures and temperatures (except for the lowest combination at 10 °C considered as "antagonistic". In binary mixtures, the decrease in both ventilatory and locomotor activities and the decline in haemolymphatic [Cl(-] were amplified when respectively compared to those observed with the same concentrations of AsV or Cd alone. However, the presence of AsV decreased the haemolymphatic [Na(+] loss when G. pulex was exposed to the lowest Cd concentration. Finally, the observed physiological and behavioural effects (except ventilation in G. pulex exposed to AsV and/or Cd were exacerbated under the highest temperature. The discussion encompasses both the toxicity

  17. In silico analysis of bacterial arsenic islands reveals remarkable synteny and functional relatedness between arsenate and phosphate

    Directory of Open Access Journals (Sweden)

    Christopher eRensing

    2013-11-01

    Full Text Available In order to construct a more universal model for understanding the genetic requirements for bacterial AsIII oxidation, an in silico examination of the available sequences in the GenBank was assessed and revealed 21 conserved 5-71 kb arsenic islands within phylogenetically diverse bacterial genomes. The arsenic islands included the AsIII oxidase structural genes aioBA, ars operons (e.g. arsRCB which code for arsenic resistance, and pho, pst, and phn genes known to be part of the classical phosphate stress response and that encode functions associated with regulating and acquiring organic and inorganic phosphorus. The regulatory genes aioXSR were also an island component, but only in Proteobacteria and orientated differently depending on whether they were in α-Proteobacteria or β-/γ-Proteobacteria. Curiously though, while these regulatory genes have been shown to be essential to AsIII oxidation in the Proteobacteria, they are absent in most other organisms examined, inferring different regulatory mechanism(s yet to be discovered. Phylogenetic analysis of the aio, ars, pst and phn genes revealed evidence of both vertical inheritance and horizontal gene transfer. It is therefore likely the arsenic islands did not evolve as a whole unit but formed independently by acquisition of functionally related genes and operons in respective strains. Considering gene synteny and structural analogies between arsenate and phosphate, we presumed that these genes function together in helping these microbes to be able to use even low concentrations of phosphorus needed for vital functions under high concentrations of arsenic, and defined these sequences as the arsenic islands.

  18. Redox state and energetic equilibrium determine the magnitude of stress in Hydrilla verticillata upon exposure to arsenate.

    Science.gov (United States)

    Srivastava, Sudhakar; Suprasanna, Penna; D'Souza, Stanislaus Francis

    2011-10-01

    Arsenic (As) is a potential hazard to plants' health, however the mechanisms of its toxicity are yet to be properly understood. To determine the impact of redox state and energetic in stress imposition, plants of Hydrilla verticillata (L.f.) Royle, which are known to be potential accumulator of As, were exposed to 100 and 500 μM arsenate (AsV) for 4 to 96 h. Plants demonstrated significant As accumulation with the maximum being at 500 μM after 96 h (568 μg g(-1) dry weight, dw). The accumulation of As led to a significant increase in the level of reactive oxygen species, nitric oxide, carbonyl, malondialdehyde, and percentage of DNA degradation. In addition, the activity of pro-oxidant enzymes like NADPH oxidase and ascorbate oxidase also showed significant increases. These parameters collectively indicated oxidative stress, which in turn caused an increase in percentage of cell death. These negative effects were seemingly linked to an altered energetic and redox equilibrium [analyzed in terms of ATP/ADP, NADH/NAD, NADPH/NADP, reduced glutathione/oxidized glutathione, and ascorbate/dehydroascobate ratios]. Although there was significant increase in the levels of phytochelatins, the As chelating ligands, a large amount of As was presumably present as free ion particularly at 500 μM AsV, which supposedly produced toxic responses. In conclusion, the study demonstrated that the magnitude of disturbance to redox and energetic equilibrium of plants upon AsV exposure determines the extent of toxicity to plants.

  19. Adsorption and desorption of arsenate on sandy sediments from contaminated and uncontaminated saturated zones: Kinetic and equilibrium modeling.

    Science.gov (United States)

    Hafeznezami, Saeedreza; Zimmer-Faust, Amity G; Dunne, Aislinn; Tran, Tiffany; Yang, Chao; Lam, Jacquelyn R; Reynolds, Matthew D; Davis, James A; Jay, Jennifer A

    2016-08-01

    Application of empirical models to adsorption of contaminants on natural heterogeneous sorbents is often challenging due to the uncertainty associated with fitting experimental data and determining adjustable parameters. Sediment samples from contaminated and uncontaminated portions of a study site in Maine, USA were collected and investigated for adsorption of arsenate [As(V)]. Two kinetic models were used to describe the results of single solute batch adsorption experiments. Piecewise linear regression of data linearized to fit pseudo-first order kinetic model resulted in two distinct rates and a cutoff time point of 14-19 h delineating the biphasic behavior of solute adsorption. During the initial rapid adsorption stage, an average of 60-80% of the total adsorption took place. Pseudo-second order kinetic models provided the best fit to the experimental data (R(2) > 0.99) and were capable of describing the adsorption over the entire range of experiments. Both Langmuir and Freundlich isotherms provided reasonable fits to the adsorption data at equilibrium. Langmuir-derived maximum adsorption capacity (St) of the studied sediments ranged between 29 and 97 mg/kg increasing from contaminated to uncontaminated sites. Solid phase As content of the sediments ranged from 3.8 to 10 mg/kg and the As/Fe ratios were highest in the amorphous phase. High-pH desorption experiments resulted in a greater percentage of solid phase As released into solution from experimentally-loaded sediments than from the unaltered samples suggesting that As(V) adsorption takes place on different reversible and irreversible surface sites.

  20. Phytochelatins and antioxidant systems respond differentially during arsenite and arsenate stress in Hydrilla verticillata (L.f.) Royle.

    Science.gov (United States)

    Srivastava, S; Mishra, S; Tripathi, R D; Dwivedi, S; Trivedi, P K; Tandon, P K

    2007-04-15

    Serious contamination of aquatic systems by arsenic (As) in different parts of the world calls for the development of an in situ cost-effective phytoremediation technology. In the present investigation, plants of Hydrilla verticillata (L.f.) Royle were exposed to various concentrations of arsenate (As(V)) (0-250 microM) and arsenite (AsIII) (0-25 microM) and analyzed for accumulation responses vis-à-vis biochemical changes. Total As accumulation was found to be higher in plants exposed to AsIII (315 microg g(-1) dw at 25 microM) compared to As(V) (205 microg g(-1) dw at 250 microM) after 7 d of treatment. Plants tolerated low concentrations of As(III) and As(V) by detoxifying the metalloid through augmented synthesis of thiols such as phytochelatins and through increased activity of antioxidant enzymes. While As(V) predominantly stimulated antioxidant enzyme activity, As(III) primarily caused enhanced levels of thiols. The maximum amount of As chelated by PCs was found to be about 39% in plants exposed to As(III) (at 10 microM) and 35% in As(V) exposed plants (at 50 microM) after 4 d. Only the respective highest concentrations of As(III) (25 microM) and As(V) (250 microM) proved toxic for normal plant growth after prolonged treatment. Thus, H. verticillata forms a promising candidate for the phytoremediation of As contaminated water.

  1. Selective Reduction of Cr(VI in Chromium, Copper and Arsenic (CCA Mixed Waste Streams Using UV/TiO2 Photocatalysis

    Directory of Open Access Journals (Sweden)

    Shan Zheng

    2015-02-01

    Full Text Available The highly toxic Cr(VI is a critical component in the Chromated Copper Arsenate (CCA formulations extensively employed as wood preservatives. Remediation of CCA mixed waste and discarded treated wood products is a significant challenge. We demonstrate that UV/TiO2 photocatalysis effectively reduces Cr(VI to less toxic Cr(III in the presence of arsenate, As(V, and copper, Cu(II. The rapid conversion of Cr(VI to Cr(III during UV/TiO2 photocatalysis occurs over a range of concentrations, solution pH and at different Cr:As:Cu ratios. The reduction follows pseudo-first order kinetics and increases with decreasing solution pH. Saturation of the reaction solution with argon during UV/TiO2 photocatalysis had no significant effect on the Cr(VI reduction demonstrating the reduction of Cr(VI is independent of dissolved oxygen. Reduction of Cu(II and As(V does not occur under the photocatalytic conditions employed herein and the presence of these two in the tertiary mixtures had a minimal effect on Cr(VI reduction. The Cr(VI reduction was however, significantly enhanced by the addition of formic acid, which can act as a hole scavenger and enhance the reduction processes initiated by the conduction band electron. Our results demonstrate UV/TiO2 photocatalysis effectively reduces Cr(VI in mixed waste streams under a variety of conditions.

  2. Selective reduction of Cr(VI) in chromium, copper and arsenic (CCA) mixed waste streams using UV/TiO2 photocatalysis.

    Science.gov (United States)

    Zheng, Shan; Jiang, Wenjun; Rashid, Mamun; Cai, Yong; Dionysiou, Dionysios D; O'Shea, Kevin E

    2015-02-03

    The highly toxic Cr(VI) is a critical component in the Chromated Copper Arsenate (CCA) formulations extensively employed as wood preservatives. Remediation of CCA mixed waste and discarded treated wood products is a significant challenge. We demonstrate that UV/TiO2 photocatalysis effectively reduces Cr(VI) to less toxic Cr(III) in the presence of arsenate, As(V), and copper, Cu(II). The rapid conversion of Cr(VI) to Cr(III) during UV/TiO2 photocatalysis occurs over a range of concentrations, solution pH and at different Cr:As:Cu ratios. The reduction follows pseudo-first order kinetics and increases with decreasing solution pH. Saturation of the reaction solution with argon during UV/TiO2 photocatalysis had no significant effect on the Cr(VI) reduction demonstrating the reduction of Cr(VI) is independent of dissolved oxygen. Reduction of Cu(II) and As(V) does not occur under the photocatalytic conditions employed herein and the presence of these two in the tertiary mixtures had a minimal effect on Cr(VI) reduction. The Cr(VI) reduction was however, significantly enhanced by the addition of formic acid, which can act as a hole scavenger and enhance the reduction processes initiated by the conduction band electron. Our results demonstrate UV/TiO2 photocatalysis effectively reduces Cr(VI) in mixed waste streams under a variety of conditions.

  3. Sequential extraction method for speciation of arsenate and arsenite in mineral soils.

    Science.gov (United States)

    Huang, Jen-How; Kretzschmar, Ruben

    2010-07-01

    A novel sequential extraction method for the speciation of As(III) and As(V) in oxic and anoxic mineral soils was developed and tested. The procedure consists of seven extraction steps targeting various As pools ranging from weakly adsorbed to well-crystalline species. Each step was specifically designed to preserve the As(III) and As(V) redox states, e.g., by complexation of As(III) with diethyldithiocarbamate or pyrrolidinedithiocarbamate, using mild reductive (NH(2)OH.HCl) or oxidative (hot HNO(3)) extractions, and complexing (Fe(3+) with Cl(-), acetate, and oxalate) or precipitating (S(2-) with Hg(2+)) matrix elements, which may cause As redox transformations. Using high-performance liquid chromatography-inductively coupled plasma-mass spectrometry (HPLC-ICP-MS) for the quantification of dissolved As(III) and As(V) in the extracts, the detection limit for each step was in the range of 1.0-75 ng As/g, depending on the extraction matrix. Thus, the procedure is also well-suited for As speciation in soils or sediments with low As concentrations, where analyses by X-ray absorption spectroscopy (XAS) may be difficult. The entire extraction sequence can be performed under normal atmosphere, which greatly simplifies sample handling. The proposed method was tested using model minerals spiked with As(III) or As(V), two strongly As-polluted soil previously characterized for As speciation by XAS, and three less-polluted soils.

  4. Enhanced uranium immobilization and reduction by Geobacter sulfurreducens biofilms.

    Science.gov (United States)

    Cologgi, Dena L; Speers, Allison M; Bullard, Blair A; Kelly, Shelly D; Reguera, Gemma

    2014-11-01

    Biofilms formed by dissimilatory metal reducers are of interest to develop permeable biobarriers for the immobilization of soluble contaminants such as uranium. Here we show that biofilms of the model uranium-reducing bacterium Geobacter sulfurreducens immobilized substantially more U(VI) than planktonic cells and did so for longer periods of time, reductively precipitating it to a mononuclear U(IV) phase involving carbon ligands. The biofilms also tolerated high and otherwise toxic concentrations (up to 5 mM) of uranium, consistent with a respiratory strategy that also protected the cells from uranium toxicity. The enhanced ability of the biofilms to immobilize uranium correlated only partially with the biofilm biomass and thickness and depended greatly on the area of the biofilm exposed to the soluble contaminant. In contrast, uranium reduction depended on the expression of Geobacter conductive pili and, to a lesser extent, on the presence of the c cytochrome OmcZ in the biofilm matrix. The results support a model in which the electroactive biofilm matrix immobilizes and reduces the uranium in the top stratum. This mechanism prevents the permeation and mineralization of uranium in the cell envelope, thereby preserving essential cellular functions and enhancing the catalytic capacity of Geobacter cells to reduce uranium. Hence, the biofilms provide cells with a physically and chemically protected environment for the sustained immobilization and reduction of uranium that is of interest for the development of improved strategies for the in situ bioremediation of environments impacted by uranium contamination.

  5. Spherical polystyrene-supported nano-Fe{sub 3}O{sub 4} of high capacity and low-field separation for arsenate removal from water

    Energy Technology Data Exchange (ETDEWEB)

    Jiang, Wei; Chen, Xubin; Niu, Yingjie [State Key Laboratory of Pollution Control and Resource Reuse, School of the Environment, Xianlin Campus, Nanjing University, Nanjing 210023 (China); Pan, Bingcai, E-mail: bcpan@nju.edu.cn [State Key Laboratory of Pollution Control and Resource Reuse, School of the Environment, Xianlin Campus, Nanjing University, Nanjing 210023 (China); National Engineering Center for Organic Pollution Control and Resource Reuse (Suzhou Division), Suzhou High-Tech Institute of Nanjing University, Suzhou 215123 (China)

    2012-12-15

    Highlights: Black-Right-Pointing-Pointer Nano-Fe{sub 3}O{sub 4} was coated onto polystyrene (PS) beads to obtain PS-Fe{sub 3}O{sub 4} for arsenate removal from water. Black-Right-Pointing-Pointer PS-Fe{sub 3}O{sub 4} exhibited higher capacity and faster kinetics for arsenate adsorption than Fe{sub 3}O{sub 4}. Black-Right-Pointing-Pointer PS-Fe{sub 3}O{sub 4} can be effectively separated from water under a low magnetic field (<0.035 T). Black-Right-Pointing-Pointer PS-Fe{sub 3}O{sub 4} can be employed for multiple uses after regeneration with alkaline solution. - Abstract: Fe{sub 3}O{sub 4} is a promising material for arsenic sequestration due to its specific affinity toward arsenic and feasible magnetic separation. How to further increase its adsorption capacity while maintain its low-field separation is an interesting but challenging task. In this study nano-Fe{sub 3}O{sub 4} was successfully coated onto the outer surface of polystyrene (PS) beads of 350-400 nm in diameter by the hetero-coacervation method, and the resulting composite PS-Fe{sub 3}O{sub 4} was characterized using transmission electron microscope (TEM), X-ray powder diffraction (XRD), and electrophoresis measurement (EM). Its adsorption toward arsenate was investigated as a function of solution pH, arsenic concentration, contact time, and coexisting anions. The maximum adsorption capacity of PS-Fe{sub 3}O{sub 4} was 139.3 mg/g Fe{sub 3}O{sub 4}, 77.7% greater than that of bulky Fe{sub 3}O{sub 4}. More attractively, it can be readily separated from water under a low magnetic field (<0.035 T). Continuous adsorption-desorption cyclic results demonstrated that arsenate-loaded PS-Fe{sub 3}O{sub 4} can be effectively regenerated by NaOH solution, and the regenerated composite beads could be employed for repeated use without significant capacity loss, indicating that nano-Fe{sub 3}O{sub 4} was steadily coated onto the surface of PS beads. Generally, PS beads could be employed as a promising host to

  6. Nitrate reduction functional genes and nitrate reduction potentials persist in deeper estuarine sediments. Why?

    Directory of Open Access Journals (Sweden)

    Sokratis Papaspyrou

    Full Text Available Denitrification and dissimilatory nitrate reduction to ammonium (DNRA are processes occurring simultaneously under oxygen-limited or anaerobic conditions, where both compete for nitrate and organic carbon. Despite their ecological importance, there has been little investigation of how denitrification and DNRA potentials and related functional genes vary vertically with sediment depth. Nitrate reduction potentials measured in sediment depth profiles along the Colne estuary were in the upper range of nitrate reduction rates reported from other sediments and showed the existence of strong decreasing trends both with increasing depth and along the estuary. Denitrification potential decreased along the estuary, decreasing more rapidly with depth towards the estuary mouth. In contrast, DNRA potential increased along the estuary. Significant decreases in copy numbers of 16S rRNA and nitrate reducing genes were observed along the estuary and from surface to deeper sediments. Both metabolic potentials and functional genes persisted at sediment depths where porewater nitrate was absent. Transport of nitrate by bioturbation, based on macrofauna distributions, could only account for the upper 10 cm depth of sediment. A several fold higher combined freeze-lysable KCl-extractable nitrate pool compared to porewater nitrate was detected. We hypothesised that his could be attributed to intracellular nitrate pools from nitrate accumulating microorganisms like Thioploca or Beggiatoa. However, pyrosequencing analysis did not detect any such organisms, leaving other bacteria, microbenthic algae, or foraminiferans which have also been shown to accumulate nitrate, as possible candidates. The importance and bioavailability of a KCl-extractable nitrate sediment pool remains to be tested. The significant variation in the vertical pattern and abundance of the various nitrate reducing genes phylotypes reasonably suggests differences in their activity throughout the

  7. Nitrate Reduction Functional Genes and Nitrate Reduction Potentials Persist in Deeper Estuarine Sediments. Why?

    Science.gov (United States)

    Papaspyrou, Sokratis; Smith, Cindy J.; Dong, Liang F.; Whitby, Corinne; Dumbrell, Alex J.; Nedwell, David B.

    2014-01-01

    Denitrification and dissimilatory nitrate reduction to ammonium (DNRA) are processes occurring simultaneously under oxygen-limited or anaerobic conditions, where both compete for nitrate and organic carbon. Despite their ecological importance, there has been little investigation of how denitrification and DNRA potentials and related functional genes vary vertically with sediment depth. Nitrate reduction potentials measured in sediment depth profiles along the Colne estuary were in the upper range of nitrate reduction rates reported from other sediments and showed the existence of strong decreasing trends both with increasing depth and along the estuary. Denitrification potential decreased along the estuary, decreasing more rapidly with depth towards the estuary mouth. In contrast, DNRA potential increased along the estuary. Significant decreases in copy numbers of 16S rRNA and nitrate reducing genes were observed along the estuary and from surface to deeper sediments. Both metabolic potentials and functional genes persisted at sediment depths where porewater nitrate was absent. Transport of nitrate by bioturbation, based on macrofauna distributions, could only account for the upper 10 cm depth of sediment. A several fold higher combined freeze-lysable KCl-extractable nitrate pool compared to porewater nitrate was detected. We hypothesised that his could be attributed to intracellular nitrate pools from nitrate accumulating microorganisms like Thioploca or Beggiatoa. However, pyrosequencing analysis did not detect any such organisms, leaving other bacteria, microbenthic algae, or foraminiferans which have also been shown to accumulate nitrate, as possible candidates. The importance and bioavailability of a KCl-extractable nitrate sediment pool remains to be tested. The significant variation in the vertical pattern and abundance of the various nitrate reducing genes phylotypes reasonably suggests differences in their activity throughout the sediment column. This

  8. Characteristics and Kinetic Analysis of AQS Transformation and Microbial Goethite Reduction:Insight into "Redox mediator-Microbe-Iron oxide" Interaction Process.

    Science.gov (United States)

    Zhu, Weihuang; Shi, Mengran; Yu, Dan; Liu, Chongxuan; Huang, Tinglin; Wu, Fengchang

    2016-01-01

    The characteristics and kinetics of redox transformation of a redox mediator, anthraquinone-2-sulfonate (AQS), during microbial goethite reduction by Shewanella decolorationis S12, a dissimilatory iron reduction bacterium (DIRB), were investigated to provide insights into "redox mediator-iron oxide" interaction in the presence of DIRB. Two pre-incubation reaction systems of the "strain S12- goethite" and the "strain S12-AQS" were used to investigate the dynamics of goethite reduction and AQS redox transformation. Results show that the concentrations of goethite and redox mediator, and the inoculation cell density all affect the characteristics of microbial goethite reduction, kinetic transformation between oxidized and reduced species of the redox mediator. Both abiotic and biotic reactions and their coupling regulate the kinetic process for "Quinone-Iron" interaction in the presence of DIRB. Our results provide some new insights into the characteristics and mechanisms of interaction among "quinone-DIRB- goethite" under biotic/abiotic driven.

  9. New inorganic (an)ion exchangers with a higher affinity for arsenate and a competitive removal capacity towards fluoride, bromate, bromide, selenate, selenite, arsenite and borate

    KAUST Repository

    Chubar, Natalia

    2011-12-01

    Highly selective materials and effective technologies are needed to meet the increasingly stronger drinking water standards for targeted ionic species. Inorganic ion exchangers based on individual and mixed-metal hydrous oxides (or mixed adsorbents that contain inorganic ion exchangers in their composition) are adsorptive materials that are capable of lowering the concentrations of anionic contaminants, such as H 2AsO 4 -, H 3AsO 3, F -, Br -, BrO 3 -, HSeO 4 -, HSeO 3 - and H 3BO 3, to 10 μg/L or less. To achieve a higher selectivity towards arsenate, a new ion exchanger based on Mg-Al hydrous oxides was developed by a novel, cost-effective and environmentally friendly synthesis method via a non-traditional (alkoxide-free) sol-gel approach. The exceptional adsorptive capacity of the Mg-Al hydrous oxides towards H 2AsO 4 - (up to 200 mg[As]/gdw) is due to the high affinity of this sorbent towards arsenate (steep equilibrium isotherms) and its fast adsorption kinetics. Because of the mesoporous (as determined by N 2 adsorption and SEM) and layered (as determined by XRD and FTIR) structure of the ion-exchange material as well as the abundance of anion exchange sites (as determined by XPS and potentiometric titration) on its surface the material demonstrated very competitive (or very high) removal capacity towards other targeted anions, including fluoride, bromide, bromate, selenate, selenite, and borate. © 2011 IWA Publishing.

  10. A Raman spectroscopic study of the arsenate mineral chenevixite Cu2Fe23+(AsO4)2(OH)4ṡH2O

    Science.gov (United States)

    Frost, Ray L.; López, Andrés; Scholz, Ricardo; Lana, Cristiano; Xi, Yunfei

    2015-01-01

    We have studied the mineral chenevixite from Manto Cuba Mine, San Pedro de Cachiyuyo District, Inca de Oro, Chañaral Province, Atacama Region, Chile, using a combination of scanning electron microscopy (SEM) with energy dispersive spectroscopy (EDX) and vibrational spectroscopy. Qualitative chemical analysis shows a homogeneous composition, with predominance of As, Fe, Al, Cu, Fe and Cu. Minor amounts of Si were also observed. Raman spectroscopy complimented with infrared spectroscopy has been used to assess the molecular structure of the arsenate minerals chenevixite. Characteristic Raman and infrared bands of the (AsO4)3- stretching and bending vibrations are identified and described. The observation of multiple bands in the (AsO4)3- bending region offers support for the loss of symmetry of the arsenate anion in the structure of chenevixite. Raman bands attributable to the OH stretching vibrations of water and hydroxyl units were analysed. Estimates of the hydrogen bond distances were made based upon the OH stretching wavenumbers.

  11. Biogenic FeS accelerates reductive dechlorination of carbon tetrachloride by Shewanella putrefaciens CN32.

    Science.gov (United States)

    Huo, Ying-Chao; Li, Wen-Wei; Chen, Chang-Bin; Li, Chen-Xuan; Zeng, Raymond; Lau, Tai-Chu; Huang, Tian-Yin

    2016-12-01

    Dissimilatory metal reducing bacteria (DMRB) widely exist in the subsurface environment and are involved in various contaminant degradation and element geochemical cycling processes. Recent studies suggest that DMRB can biosynthesize metal nanoparticles during metal reduction, but it is unclear yet how such biogenic nanomaterials would affect their decontamination behaviors. In this study, we found that the dechlorination rates of carbon tetrachloride (CT) by Shewanella putrefaciens CN32 was significantly increased by 8 times with the formation of biogenic ferrous sulfide (FeS) nanoparticles. The pasteurized biogenic FeS enabled 5 times faster dechlorination than abiotic FeS that had larger sizes and irregular structure, confirming a significant contribution of the biogenic FeS to CT bioreduction resulting from its good dispersion and relatively high dechlorination activity. This study highlights a potentially important role of biosynthesized nanoparticles in environmental bioremediation. Copyright © 2016 Elsevier Inc. All rights reserved.

  12. Interactions Between Fe(III)-oxides and Fe(III)-phyllosilicates During Microbial Reduction 2: Natural Subsurface Sediments

    Energy Technology Data Exchange (ETDEWEB)

    Wu, T.; Griffin, A. M.; Gorski, C. A.; Shelobolina, E. S.; Xu, H.; Kukkadapu, R. K.; Roden, E. E.

    2016-04-19

    Dissimilatory microbial reduction of solid-phase Fe(III)-oxides and Fe(III)-bearing phyllosilicates (Fe(III)-phyllosilicates) is an important process in anoxic soils, sediments, and subsurface materials. Although various studies have documented the relative extent of microbial reduction of single-phase Fe(III)-oxides and Fe(III)-phyllosilicates, detailed information is not available on interaction between these two processes in situations where both phases are available for microbial reduction. The goal of this research was to use the model dissimilatory iron-reducing bacterium (DIRB) Geobacter sulfurreducens to study Fe(III)-oxide vs. Fe(III)-phyllosilicate reduction in a range of subsurface materials and Fe(III)-oxide stripped versions of the materials. Low temperature (12K) Mossbauer spectroscopy was used to infer changes in the relative abundances of Fe(III)-oxide, Fe(III)-phyllosilicate, and phyllosilicate-associated Fe(II) (Fe(II)-phyllosilicate). A Fe partitioning model was employed to analyze the fate of Fe(II) and assess the potential for abiotic Fe(II)-catalyzed reduction of Fe(III)-phyllosilicates. The results showed that in most cases Fe(III)- oxide utilization dominated (70-100 %) bulk Fe(III) reduction activity, and that electron transfer from oxide-derived Fe(II) played only a minor role (ca. 10-20 %) in Fe partitioning. In addition, the extent of Fe(III)-oxide reduction was positively correlated to surface area-normalized cation exchange capacity and the phyllosilicate-Fe(III)/total Fe(III) ratio, which suggests that the phyllosilicates in the natural sediments promoted Fe(III)-oxide reduction by binding of oxide-derived Fe(II), thereby enhancing Fe(III)-oxide reduction by reducing or delaying the inhibitory effect that Fe(II) accumulation on oxide and DIRB cell surfaces has on Fe(III)-oxide reduction. In general our results suggest that although Fe(III)-oxide reduction is likely to dominate bulk Fe(III) reduction in most subsurface sediments, Fe

  13. Kinetics of Microbial Fe(III) Reduction: From the Laboratory to the Field

    Science.gov (United States)

    Bonneville, S.; van Cappellen, P.; Behrends, T.; Hyacinthe, C.

    2005-12-01

    A kinetic model for the direct microbial reduction of Fe(III)solids in the presence of excess electron donor is presented. The model assumes a two-step mechanism: (i) mutual attachment of Fe(III) solids and cells, and (ii) reduction of Fe(III) centers at the surface of attached mineral particles. The validity of the model is tested using Shewanella putrefaciens and nanohematite as model dissimilatory iron reducing bacteria and Fe(III) solid, respectively. The results demonstrate that the iron reduction rates correlate linearly with the relative coverage of the cell surface by nanohematite, hence supporting a direct electron transfer from membrane-bound reductases to the mineral surface. The model is extended to the reduction by S. putrefaciens of other Fe(III) oxyhydroxides, as well as Fe(III)-rich natural sediments. The maximum reduction rates per cell of Fe(III)oxyhydroxides are shown to correlate with the solubility of the solid phases, while the half-saturation constants depend on the solid to cell ratio. The implications of the laboratory-based kinetics for including microbial iron reduction in reactive transport models of natural porous media are discussed.

  14. Reduction of Fe(III) colloids by Shewanella putrefaciens: A kinetic model

    Science.gov (United States)

    Bonneville, Steeve; Behrends, Thilo; van Cappellen, Philippe; Hyacinthe, Christelle; Röling, Wilfred F. M.

    2006-12-01

    A kinetic model for the microbial reduction of Fe(III) oxyhydroxide colloids in the presence of excess electron donor is presented. The model assumes a two-step mechanism: (1) attachment of Fe(III) colloids to the cell surface and (2) reduction of Fe(III) centers at the surface of attached colloids. The validity of the model is tested using Shewanella putrefaciens and nanohematite as model dissimilatory iron reducing bacteria and Fe(III) colloidal particles, respectively. Attachment of nanohematite to the bacteria is formally described by a Langmuir isotherm. Initial iron reduction rates are shown to correlate linearly with the relative coverage of the cell surface by nanohematite particles, hence supporting a direct electron transfer from membrane-bound reductases to mineral particles attached to the cells. Using internally consistent parameter values for the maximum attachment capacity of Fe(III) colloids to the cells, Mmax, the attachment constant, KP, and the first-order Fe(III) reduction rate constant, k, the model reproduces the initial reduction rates of a variety of fine-grained Fe(III) oxyhydroxides by S. putrefaciens. The model explains the observed dependency of the apparent Fe(III) half-saturation constant, Km∗, on the solid to cell ratio, and it predicts that initial iron reduction rates exhibit saturation with respect to both the cell density and the abundance of the Fe(III) oxyhydroxide substrate.

  15. ARSENIC ADSORPTION AND REDUCTION IN IRON-RICH SOILS NEARBY LANDFILLS IN NORTHWEST FLORIDA

    Directory of Open Access Journals (Sweden)

    Hongqin Xue

    2016-01-01

    Full Text Available In Florida, soils are mainly composed of Myakka, an acid soil characterized by a subsurface accumulation of humus and Al(III and Fe(III oxides. Downgradient of the landfills in Northwest Florida, elevated levels of iron and arsenic observations had been made in the groundwater from monitoring wells, which was attributed to the geomicrobial iron and arsenic reduction. There is thus an immediate research need for a better understanding of the reduction reactions that are responsible for the mobilization of iron and arsenic in the subsurface soil nearby landfills. Owing to the high Fe(III oxide content, As(V adsorption reactions with Fe(III oxide surfaces are particularly important, which may control As(V reduction. This research focused on the investigation of the biogeochemical processes of the subsurface soil nearby landfills of Northwest Florida. Arsenic and iron reduction was studied in batch reactors and quantified based on Monod-type microbial kinetic growth simulations. As(V adsorption in iron-rich Northwest Floridian soils was further investigated to explain the reduction observations. It was demonstrated in this research that solubilization of arsenic in the subsurface soil nearby landfills in Northwest Florida would likely occur under conditions favoring Fe(III dissimilatory reduction.

  16. Properties and reactivity of Fe-organic matter associations formed by coprecipitation versus adsorption: Clues from arsenate batch adsorption

    Science.gov (United States)

    Mikutta, Robert; Lorenz, Dennis; Guggenberger, Georg; Haumaier, Ludwig; Freund, Anja

    2014-11-01

    Ferric oxyhydroxides play an important role in controlling the bioavailability of oxyanions such as arsenate and phosphate in soil. Despite this, little is known about the properties and reactivity of Fe(III)-organic matter phases derived from adsorption (reaction of organic matter (OM) to post-synthesis Fe oxide) versus coprecipitation (formation of Fe oxides in presence of OM). Coprecipitates and adsorption complexes were synthesized at pH 4 using two natural organic matter (NOM) types extracted from forest floor layers (Oi and Oa horizon) of a Haplic Podzol. Iron(III) coprecipitates were formed at initial molar metal-to-carbon (M/C) ratios of 1.0 and 0.1 and an aluminum (Al)-to-Fe(III) ratio of 0.2. Sample properties were studied by X-ray diffraction, X-ray photoelectron spectroscopy (XPS), N2 gas adsorption, dynamic light scattering, and electrophoretic mobility measurements. Arsenic [As(V)] adsorption to Fe-OM phases was studied in batch experiments (168 h, pH 4, 100 μM As). The organic carbon (OC) contents of the coprecipitates (82-339 mg g-1) were higher than those of adsorption complexes (31 and 36 mg g-1), leading to pronounced variations in specific surface area (9-300 m2 g-1), average pore radii (1-9 nm), and total pore volumes (11-374 mm3 g-1) but being independent of the NOM type or the presence of Al. The occlusion of Fe solids by OM (XPS surface concentrations: 60-82 atom% C) caused comparable pHPZC (1.5-2) of adsorption complexes and coprecipitates. The synthesis conditions resulted in different Fe-OM association modes: Fe oxide particles in 'M/C 0.1' coprecipitates covered to a larger extent the outermost aggregate surfaces, for some 'M/C 1.0' coprecipitates OM effectively enveloped the Fe oxides, while OM in the adsorption complexes primarily covered the outer aggregate surfaces. Despite of their larger OC contents, adsorption of As(V) was fastest to coprecipitates formed at low Fe availability (M/C 0.1) and facilitated by desorption of weakly

  17. An approach for evaluating nanomaterials for use as packed bed adsorber media: a case study of arsenate removal by titanate nanofibers.

    Science.gov (United States)

    Hristovski, Kiril; Westerhoff, Paul; Crittenden, John

    2008-08-15

    The primary goal of this paper is to propose a series of logical testing steps to determine whether a new adsorbent media is suitable for application in packed bed configurations for treating drinking water pollutants. Although the focus of the study is placed on titanate nanofibers, as a never before tested media for arsenate removal, the set of testing processes that encompasses nanomaterial characterization, equilibrium and kinetics tests, and modeling, can be used on any material to quickly determine whether these materials are suitable for water treatment applications in a packed bed configurations. Bundle-like titanate nanofibers were produced by an alkaline synthesis method with Degussa P25 TiO(2). The synthesized nanofibers have a rectangular ribbon-like shape and exhibited large surface area (126 m(2) g(-1)) and high adsorbent porosity (epsilon(P) approximately 0.51). Equilibrium batch experiments conducted in 10 mM NaHCO(3) buffered ultrapure water at three pH values (6.6, 7.6 and 8.3) with 125 microg L(-1) As(V) were fit with the Freundlich isotherm equation (q=KxC(E)(1/n)). The Freundlich adsorption intensity parameter (1/n) ranged from 0.51 to 0.66, while the capacity parameters (K) ranged from 5 to 26 microg g(-1). The pore diffusion coefficient and tortuosity were estimated to be D(P) approximately 1.04 x 10(-6) cm(2) s(-1), and tau approximately 4.4. For a packed bed adsorbent operated at a realistic loading rate of 11.6 m(3) m(-2) h(-1) with particles obtained by sieving the media through US mesh 80 x 120, the external mass transport coefficient was estimated to be k(f) approximately 8.84 x 10(-3) cm s(-1). In this study, surface diffusion was ignored because the adsorbent has high porosity. Pore surface diffusion model (PSDM) was used to predict the arsenate breakthrough curve, and a short bed adsorbent (SBA) test was conducted under the same conditions to verify validity of the estimated values. There was no titanium release in the treated

  18. Iron Isotope Fractionation Reveals Structural Change upon Microbial and Chemical Reduction of Nontronite NAu-1

    Science.gov (United States)

    Liu, K.; Wu, L.; Shi, B.; Smeaton, C. M.; Li, W.; Beard, B. L.; Johnson, C.; Roden, E. E.; Van Cappellen, P.

    2015-12-01

    Iron (Fe) isotope fractionations were determined during reduction of structural Fe(III) in nontronite NAu-1 biologically by Shewanella oneidensis MR-1 and Geobacter sulfurreducens PCA and chemically by dithionite. ~10% reduction was achieved in biological reactors, with similar reduction extents obtained by dithionite. We hypothesize that two stages occurred in our reactors. Firstly, reduction started from edge sites of clays and the produced Fe(II) partially remained in situ and partially was released into solution. Next aqueous Fe(II) adsorbed onto basal planes. The basal sorbed Fe(II) then undergoes electron transfer and atom exchange (ETAE) with octahedral Fe(III) in clays, with the most negative fractionation factor Δ56Febasal Fe(II)-structural Fe(III)of -1.7‰ when basal sorption reached a threshold value. Secondly, when the most reactive Fe(III) was exhausted, bioreduction significantly slowed down and chemical reduction was able to achieve 24% due to diffusion of small size dithionite. Importantly, no ETAE occurred between basal Fe(II) and structural Fe(III) due to blockage of pathways by collapsed clay layers. This two-stage process in our reduction experiments is distinctive from abiotic exchange experiments by mixing aqueous Fe(II) and NAu-1, where no structural change of clay would block ETAE between basal Fe(II) and structural Fe(III). The separation of reduction sites (clay edges) and sorption sites (basal planes) is unique to clay minerals with layered structure. In contrast, reduction and sorption occur on the same sites on the surfaces of Fe oxyhydroxides, where reduction does not induce structure change. Thus, the Fe isotope fractionations are the same for reduction and abiotic exchange experiments for Fe oxides. Our study reveals important changes in electron transfer and atom exchange pathways upon reduction of clay minerals by dissimilatory Fe reducing bacteria, which is prevalent in anoxic soils and sediments.

  19. Immunological detection of enzymes for sulfate reduction in anaerobic methane-oxidizing consortia.

    Science.gov (United States)

    Milucka, Jana; Widdel, Friedrich; Shima, Seigo

    2013-05-01

    Anaerobic oxidation of methane (AOM) coupled to sulfate reduction (SR) at marine gas seeps is performed by archaeal-bacterial consortia that have so far not been cultivated in axenic binary or pure cultures. Knowledge about possible biochemical reactions in AOM consortia is based on metagenomic retrieval of genes related to those in archaeal methanogenesis and bacterial sulfate reduction, and identification of a few catabolic enzymes in protein extracts. Whereas the possible enzyme for methane activation (a variant of methyl-coenzyme M reductase, Mcr) was shown to be harboured by the archaea, enzymes for sulfate activation and reduction have not been localized so far. We adopted a novel approach of fluorescent immunolabelling on semi-thin (0.3-0.5 μm) cryosections to localize two enzymes of the SR pathway, adenylyl : sulfate transferase (Sat; ATP sulfurylase) and dissimilatory sulfite reductase (Dsr) in microbial consortia from Black Sea methane seeps. Both Sat and Dsr were exclusively found in an abundant microbial morphotype (c. 50% of all cells), which was tentatively identified as Desulfosarcina/Desulfococcus-related bacteria. These results show that ANME-2 archaea in the Black Sea AOM consortia did not express bacterial enzymes of the canonical sulfate reduction pathway and thus, in contrast to previous suggestions, most likely cannot perform canonical sulfate reduction. Moreover, our results show that fluorescent immunolabelling on semi-thin cryosections which to our knowledge has been so far only applied on cell tissues, is a powerful tool for intracellular protein detection in natural microbial associations.

  20. Physiology and interaction of nitrate and nitrite reduction in Staphylococcus carnosus.

    Science.gov (United States)

    Neubauer, H; Götz, F

    1996-04-01

    Staphylococcus carnosus reduces nitrate to ammonia in two steps. (i) Nitrate was taken up and reduced to nitrite, and nitrite was subsequently excreted. (ii) After depletion of nitrate, the accumulated nitrite was imported and reduced to ammonia, which again accumulated in the medium. The localization, energy gain, and induction of the nitrate and nitrite reductases in S. carnosus were characterized. Nitrate reductase seems to be a membrane-bound enzyme involved in respiratory energy conservation, whereas nitrite reductase seems to be a cytosolic enzyme involved in NADH reoxidation. Syntheses of both enzymes are inhibited by oxygen and induced to greater or lesser degrees by nitrate or nitrite, respectively. In whole cells, nitrite reduction is inhibited by nitrate and also by high concentrations of nitrite (> or = 10 mM). Nitrite did not influence nitrate reduction. Two possible mechanisms for the inhibition of nitrite reduction by nitrate that are not mutually exclusive are discussed. (i) Competition for NADH nitrate reductase is expected to oxidize the bulk of the NADH because of its higher specific activity. (ii) The high rate of nitrate reduction could lead to an internal accumulation of nitrite, possibly the result of a less efficient nitrite reduction or export. So far, we have no evidence for the presence of other dissimilatory or assimilatory nitrate or nitrite reductases in S. carnosus.

  1. Surface multiheme c-type cytochromes from Thermincola potens and implications for respiratory metal reduction by Gram-positive bacteria.

    Science.gov (United States)

    Carlson, Hans K; Iavarone, Anthony T; Gorur, Amita; Yeo, Boon Siang; Tran, Rosalie; Melnyk, Ryan A; Mathies, Richard A; Auer, Manfred; Coates, John D

    2012-01-31

    Almost nothing is known about the mechanisms of dissimilatory metal reduction by Gram-positive bacteria, although they may be the dominant species in some environments. Thermincola potens strain JR was isolated from the anode of a microbial fuel cell inoculated with anaerobic digester sludge and operated at 55 °C. Preliminary characterization revealed that T. potens coupled acetate oxidation to the reduction of hydrous ferric oxides (HFO) or anthraquinone-2,6-disulfonate (AQDS), an analog of the redox active components of humic substances. The genome of T. potens was recently sequenced, and the abundance of multiheme c-type cytochromes (MHCs) is unusual for a Gram-positive bacterium. We present evidence from trypsin-shaving LC-MS/MS experiments and surface-enhanced Raman spectroscopy (SERS) that indicates the expression of a number of MHCs during T. potens growth on either HFO or AQDS, and that several MHCs are localized to the cell wall or cell surface. Furthermore, one of the MHCs can be extracted from cells with low pH or denaturants, suggesting a loose association with the cell wall or cell surface. Electron microscopy does not reveal an S-layer, and the precipitation of silver metal on the cell surface is inhibited by cyanide, supporting the involvement of surface-localized redox-active heme proteins in dissimilatory metal reduction. These results provide unique direct evidence for cell wall-associated cytochromes and support MHC involvement in conducting electrons across the cell envelope of a Gram-positive bacterium.

  2. Exceptional Reductions

    CERN Document Server

    Marrani, Alessio; Riccioni, Fabio

    2011-01-01

    Starting from basic identities of the group E8, we perform progressive reductions, namely decompositions with respect to the maximal and symmetric embeddings of E7xSU(2) and then of E6xU(1). This procedure provides a systematic approach to the basic identities involving invariant primitive tensor structures of various irreprs. of finite-dimensional exceptional Lie groups. We derive novel identities for E7 and E6, highlighting the E8 origin of some well known ones. In order to elucidate the connections of this formalism to four-dimensional Maxwell-Einstein supergravity theories based on symmetric scalar manifolds (and related to irreducible Euclidean Jordan algebras, the unique exception being the triality-symmetric N = 2 stu model), we then derive a fundamental identity involving the unique rank-4 symmetric invariant tensor of the 0-brane charge symplectic irrepr. of U-duality groups, with potential applications in the quantization of the charge orbits of supergravity theories, as well as in the study of mult...

  3. Effect of Flooding Time on Dissimilatory Iron(Ⅲ)Reduction in Paddy Soil%淹水培养时间对水稻土中Fe(Ⅲ)异化还原能力的影响

    Institute of Scientific and Technical Information of China (English)

    易维洁; 曲东; 黄婉玉; 王庆

    2010-01-01

    为了模拟水稻土淹水过程,探讨不同淹水培养时间水稻土中铁还原微生物群落利用不同碳源的活性变化特征,以接种不同淹水时期的浙江水稻土浸提液作为微生物群落来源,以人工合成的Fe(OH)3为惟一的电子受体,不同碳源作为惟一电子供体,在30℃恒温条件下厌氧培养,定期测定Fe(Ⅱ)含量和pH值变化,采用Logistic 模型进行动力学分析.研究结果表明,葡萄糖作为电子供体时,不同淹水时期的微生物群落总体上对Fe(OH)3还原反应有较快的响应;丙酮酸盐作为碳源时,铁还原反应启动的时间整体迟于葡萄糖,Fe(Ⅱ)累积量在反应30d才表现出显著累积并逐渐趋于稳定;淹水20d的微生物群落能最先利用乳酸盐还原Fe(Ⅲ),反应15 d的Fe(Ⅱ)累积量达到601.60 mg·L-1;淹水30 d的铁还原微生物群落对乙酸盐的利用能力增强,最大Fe(Ⅱ)累计量升高到538.47 mg·L-1,Fe(Ⅲ)还原率达到75.8l%.不同淹水时期利用各种碳源的体系pH表现为葡萄糖从中性下降至酸性,丙酮酸盐和乳酸盐中性偏酸,乙酸盐的pH略微偏碱,不同淹水时期出现的水稻土微生物群落结构不同是导致Fe(OH)3还原能力不同的主要原因.不同的碳源利用可以指示不同的铁还原微生物群落变化:淹水培养早期的铁还原微生物群落对葡萄糖和丙酮酸盐的利用较为迅速和显著,同一时期出现的微生物群落不能以乙酸盐作为电子供体;淹水培养后期的铁还原微生物群落以乳酸盐和乙酸盐为优势碳源来还原Fe(OH)3.

  4. Microbial fuel cell used in study on dissimilatory ferric oxides reduction by Geobacter metallireducens%利用微生物燃料电池研究Geobacter metallireducens异化还原铁氧化物

    Institute of Scientific and Technical Information of China (English)

    周良; 刘志丹; 连静; 李福生; 杜竹玮; 李浩然

    2005-01-01

    微生物异化还原金属氧化物的过程中,关键问题是微生物如何把电子传递给最终的固态电子受体.利用新颖的微生物燃料电池体系,可以更细致、准确地研究这一胞外电子传递过程.实验结果表明在Geobacter metallireducens还原铁氧化物过程中, 直接接触是一种重要的电子传递方式; 而电子传递中间体,在金属氧化物表面完全被微生物细胞覆盖后, 也即在金属氧化物表面形成成熟的生物膜后, 其加速电子传递速率的作用减弱.

  5. Promotion of iron oxide reduction and extracellular electron transfer in Shewanella oneidensis by DMSO.

    Directory of Open Access Journals (Sweden)

    Yuan-Yuan Cheng

    Full Text Available The dissimilatory metal reducing bacterium Shewanella oneidensis MR-1, known for its capacity of reducing iron and manganese oxides, has great environmental impacts. The iron oxides reducing process is affected by the coexistence of alternative electron acceptors in the environment, while investigation into it is limited so far. In this work, the impact of dimethyl sulphoxide (DMSO, a ubiquitous chemical in marine environment, on the reduction of hydrous ferric oxide (HFO by S. oneidensis MR-1 was investigated. Results show that DMSO promoted HFO reduction by both wild type and ΔdmsE, but had no effect on the HFO reduction by ΔdmsB, indicating that such a promotion was dependent on the DMSO respiration. With the DMSO dosing, the levels of extracellular flavins and omcA expression were significantly increased in WT and further increased in ΔdmsE. Bioelectrochemical analysis show that DMSO also promoted the extracellular electron transfer of WT and ΔdmsE. These results demonstrate that DMSO could stimulate the HFO reduction through metabolic and genetic regulation in S. oneidensis MR-1, rather than compete for electrons with HFO. This may provide a potential respiratory pathway to enhance the microbial electron flows for environmental and engineering applications.

  6. Dynamics of ferrihydrite-bound organic carbon during microbial Fe reduction

    Science.gov (United States)

    Adhikari, Dinesh; Zhao, Qian; Das, Kamol; Mejia, Jacqueline; Huang, Rixiang; Wang, Xilong; Poulson, Simon R.; Tang, Yuanzhi; Roden, Eric E.; Yang, Yu

    2017-09-01

    The dynamics of iron (Fe)-bound organic carbon (OC) during dissimilatory microbial Fe(III) reduction has the potential to play an important role in regulating the biogeochemical cycling of carbon (C) in permanently or transiently anoxic soils and sediments. In this study, we investigated the release and transformation of ferrihydrite (Fh)-bound OC during microbial reduction of Fe by Shewanella putrefaciens strain CN32 under a fixed Fe concentration of 13 mM and varying C/Fe molar ratios. We found that reduction of Fe and reductive release of OC was dependent on the C/Fe molar ratio, with high C/Fe ratio enhancing both reduction of Fe and release of OC. For Fh-OC co-precipitates with C/Fe ratio of 3.7, 54.7% of Fh-bound OC was released to solution phase when 25.1% of Fe was reduced. The presence of OC inhibited the transformation of Fh to more crystalline Fe phases both in the bulk and on the surface. Upon reduction, Fh-bound OC became more concentrated on the surface of Fh-OC co-precipitates, and surface components were enriched with carboxylic functional groups. Reduction increased the lability of Fh-bound OC for Fh-OC co-precipitate with C/Fe ratio of 3.7, and aromatic OC was preferentially retained within the co-precipitates. Our results indicate that microbial reduction altered the quantity and composition of OC released from Fh-OC co-precipitates, depending on the C/Fe ratio and associations between Fe and OC. Assuming higher availability of released OC compared to original Fh-bound OC, reduction of Fh can likely lead to enhanced degradation of OC and result in a shorter residence time for OC in soils and sediments.

  7. Contrasting effects of Al substitution on microbial reduction of Fe(III) (hydr)oxides

    Science.gov (United States)

    Ekstrom, Eileen B.; Learman, Deric R.; Madden, Andrew S.; Hansel, Colleen M.

    2010-12-01

    Aluminum, one of the most abundant elements in soils and sediments, is commonly found co-precipitated with Fe in natural Fe(III) (hydr)oxides; yet, little is known about how Al substitution impacts bacterial Fe(III) reduction. Accordingly, we investigated the reduction of Al substituted (0-13 mol% Al) goethite, lepidocrocite, and ferrihydrite by the model dissimilatory Fe(III)-reducing bacterium (DIRB), Shewanella putrefaciens CN32. Here we reveal that the impact of Al on microbial reduction varies with Fe(III) (hydr)oxide type. No significant difference in Fe(III) reduction was observed for either goethite or lepidocrocite as a function of Al substitution. In contrast, Fe(III) reduction rates significantly decreased with increasing Al substitution of ferrihydrite, with reduction rates of 13% Al-ferrihydrite more than 50% lower than pure ferrihydrite. Although Al substitution changed the minerals' surface area, particle size, structural disorder, and abiotic dissolution rates, we did not observe a direct correlation between any of these physiochemical properties and the trends in bacterial Fe(III) reduction. Based on projected Al-dependent Fe(III) reduction rates, reduction rates of ferrihydrite fall below those of lepidocrocite and goethite at substitution levels equal to or greater than 18 mol% Al. Given the prevalence of Al substitution in natural Fe(III) (hydr)oxides, our results bring into question the conventional assumptions about Fe (hydr)oxide bioavailability and suggest a more prominent role of natural lepidocrocite and goethite phases in impacting DIRB activity in soils and sediments.

  8. Toxicology evaluation of realgar-containing Huang-Dai-Pian(HDP)as compared with arsenate in mice%复方黄黛片、雄黄与砷酸钠的毒性比较

    Institute of Scientific and Technical Information of China (English)

    徐懿乔; 梁世霞; 谢笑龙; 吴芹; 刘杰

    2012-01-01

    目的 比较含砷的复方黄黛片、雄黄与砷酸钠的毒性.方法 小鼠一次性灌胃给药,8h后检测血生化及肝肾病理变化;测定肝肾组织中的砷蓄积量及砷毒性敏感基因的表达.结果 砷酸钠组肝肾砷蓄积量显著增加,并伴肝肾功能和病理损伤,MT-1、MT-2、HO-1和IL-1β基因表达明显上调.复方黄黛片组和雄黄组的肝肾功能及病理检查与正常对照组相似,未见异常.二者砷蓄积量仅为砷酸钠组的1/25;上述基因表达仅轻微升高.结论 复方黄黛片与雄黄的急性毒性远小于砷酸钠,不宜单用总砷含量评价含砷中成药的毒性.%Objective Huang-Dai Pian (HDP) is a realgar ( As4S4 )-containing Chinese medicine for hematological malignancies.Realgar is the main component but is often taken as arsenate for risk assessment.To evaluate true risk of realgar and HDP,acute toxicity was compared with arsenate in mice.Methods Mice were orally given HDP and equivalent dose of realgar(20 mg As/kg),sodium arsenate( 10 mg As/kg),and acute toxicity and tissue arsenic content were determined.Results Arsenate increased serum ALT,AST and BUN levels,which is indicative of liver and kidney injury.Histopathology showed severe damage in arsenate-treated murine liver and kidney,while in HDP and realgar-treated animals,these lesions were mild or absent.And there was no elevation in serum biomarkers.Hepatic and renal arsenic contents were dramatically increased to 3 560 and 4 570 ng/g,respectively following arsenate administration,but only increased to 125 and 175 ng/g after HDP or realgar intake.Expressions of arsenic toxicity sensitive genes,namely metallothionein( MT- 1 and MT- 2 ),heme oxygenase- 1 ( HO- 1 )and interleukin-1β( IL-1β)were significantly increased by arsenate,but only slightly increased by HDP and realgar.Conclusion HDP and realgar are much less acutely toxic than sodium arsenate.It may be inappropriate to use total arsenic content for evaluating the safety

  9. Teor de arsênio e adsorção competitiva arsênio/fosfato e arsênio/sulfato em solos de Minas Gerais, Brasil Arsenate content, and arsenate/phosphate and arsenate/sulphate competitive adsorption in soils from Minas Gerais, Brazil

    Directory of Open Access Journals (Sweden)

    Mari Lucia Campos

    2013-06-01

    Full Text Available A alta toxicidade de As para homens e animais gera a necessidade de estudos do comportamento químico do arsenato nos solos que possam auxiliar na mitigação de áreas contaminadas com arsênio. Este trabalho teve por objetivo avaliar o teor total e a adsorção de As na ausência e presença dos ânions fosfato e sulfato em seis diferentes classes de solos do estado de Minas Gerais, Brasil. Os solos alvo deste estudo são: o Neossolo Flúvico (RU, Gleissolo Háplico (GX, Gleissolo Melânico (GM, Latossolo Vermelho Distrófico (LVd, coletados em Lavras; Neossolo Quartzarênico (RQ, coletado em Itutinga e o Latossolo Amarelo Distrófico (LAd, coletado em Rosário, no estado de Minas Gerais. As amostras de solo foram secas, moídas e peneiradas em peneira de 2,0mm para execução do teste de adsorção e peneiradas em peneira plástica com malha de 1,5mm para determinação do teor de As, o qual foi determinado pelo método 3051A. A adsorção de As foi avaliada na dose de1500µmol L-1 de As, 1500µmol L-1 de As + 1500µmol L-1 de P e 1500µmol L-1 de As + 750µmolL-1 de S, em relação solo:solução final de 1:100, a pH 5,5 e força iônica de 15mmol L-1. Os seis solos apresentaram teor médio de As entre 0,14 e 9,3mgkg-1. A porcentagem adsorvida de arsênio na ausência dos outros ânions seguiu a sequência GM>LVd=RU=LAd=GX=RQ. A adição de fosfato e sulfato reduziu a porcentagem de arsênio adsorvido e, por consequência, houve um aumentou na concentração de arsênio disponível na solução do solo.The high toxicity of arsenic to humans and animals creates the need to study the chemical behavior of arsenate in soils that can help in the mitigation of areas contaminated with arsenic. This work aimed to evaluate the total content and adsorption in the absence and presence of phosphate and sulfate anions in six different soil classes in the state of Minas Gerais, Brazil. Soils aim of this study are: Fluvic Neosol (RU, Haplic Gleysol (GX

  10. The Effects of Arbuscular-Mycorrhizal Fungi and Phosphorous on Arsenic Uptake by Sunflower Plant in Soils Spiked with Arsenite and Arsenate

    Directory of Open Access Journals (Sweden)

    Saeed Bagherifam

    2017-01-01

    Full Text Available Introduction: Arsenic is a highly toxic metalloid in group 15 of periodic table. The information on environmental behaviour of arsenic, however, is still scarce. Contamination of soils and water with arsenic and antimony due to their widespread industrial application and mining activities has raised serious environmental concerns. Nearly all Arsenic-contaminated soils results from human activities and it has different environmental and sociological impacts. Various strategies and methods have been proposed for environmental management and remediation of contaminated soils. Among all methods, the phytoremediation is receiving more attention due to its cost effective and environmental friendly characteristics. In the case of arsenic contaminated soils, there are effective factors such as soil fertility, nutrients content and microorganisms function, which can improve the uptake of As by plants. Up to now, several studies have been evaluated the effects of symbiotic fungal association in plants on increasing nutrients and toxic elements uptake. Many of authors reported that the mycorrhizal symbiosis increases the uptake of toxic elements in root and shoot of plants and consequently improve the efficacy of phytostabilization and phytoextraction processes. There are conflicting results about the effect of arbuscular- mycorrhizal fungi (AMF on As uptake by various plants. Chen et al. (4 found that Glomus mosseae symbiosis with plant reduces As concentration and enhance phosphorus content in shoot and root of plant. Whilst Cozzolino et al. (7 reported that the AMF increases as concentration in shoot and root of cabbage. Phosphorus has important role on mycorrhizal symbiosis and also As uptake by plants. Therefore, current study was conducted to evaluated effect of Glomus intraradices and Glomus mosseae symbiosis with sunflower and also soil phosphorus concentration on uptake of arsenic from arsenite and arsenate contaminated soils. Materials and

  11. Silver and gold nanocluster catalyzed reduction of methylene blue by arsine in micellar medium

    Indian Academy of Sciences (India)

    Subrata Kundu; Sujit Kumar Ghosh; Madhuri Mandal; Tarasankar Pal

    2002-11-01

    Arsenic can be determined in parts-per-million (ppm) level by absorbance measurement. This method is based on the quantitative colour bleaching of the dye, methylene blue by arsine catalyzed by nanoparticles in micellar medium. The arsine has been generated in situ from sodium arsenate by NaBH4 reduction. The absorbance measurement was carried out at the max of the dye at 660 nm. The calibration graph set-up for three linear dynamic ranges (LDR) are 0–8.63 ppm, 0–1.11 ppm and 0–0.11 ppm and limit of detections (LODs) are 1.3, 0.53 and 0.03 ppm, respectively. This method is simple, sensitive and easy to carry out. It is free from phosphate and silicate interference and applicable to real sample analysis.

  12. Linking methane oxidation with perchlorate reduction: a microbial base for possible Martian life

    Science.gov (United States)

    Miller, L. G.; Carlstrom, C.; Baesman, S. M.; Coates, J. D.; Oremland, R. S.

    2011-12-01

    Recent observations of methane (CH4) and perchlorate (ClO4-) within the atmosphere and surface of Mars, respectively, provide impetus for establishing a metabolic linkage between these compounds whereby CH4 acts as an electron donor and perchlorate acts as an electron acceptor. Direct linkage through anaerobic oxidation of methane (AOM) has not been observed. However, indirect syntrophic oxygenase-dependent oxidation of CH4 with an aerobic methane oxidizer is feasible. The pathway for anaerobic dissimilatory perchlorate reduction includes 3 steps. The first 2 are sequential reductions of (1) perchlorate to chlorate and (2) chlorate to chlorite, mediated by perchlorate reductase. The third step is disproportionation of chlorite to chloride and molecular oxygen, mediated by chlorite dismutase. Utilization of thusly derived oxygen by hydrocarbon-degrading organisms in anoxic environments was first demonstrated by Coates et. al. (1998)1, however the link to aerobic methane oxidation was not examined at that time. Here, we systematically explore the potential for several species of aerobic methanotrophs to couple with chlorite during dissimilatory perchlorate reduction. In one experiment, 0.5 kPa CH4 was completely removed in one day from the headspace of combined cell suspensions of Dechloromonas agitata strain CKB and Methylococcus capsulatus in the presence of 5 mM chlorite. Oxidation of labeled 14CH4 to 14CO2 under similar conditions was later confirmed. Another experiment demonstrated complete removal of 0.2 kPa CH4 over several days by Methylobacter albus strain BG8 with strain CKB in the presence of 5 mM chlorite. Finally, we observed complete removal of 0.2 kPa CH4 in bottles containing natural soil (enriched in methanotrophs by CH4 additions over several weeks) and strain CKB and in the presence of 10 mM chlorite. This soil, collected from a pristine lake shoreline, demonstrated endogenous methane, perchlorate, chlorate and chlorite uptake. Other soil and

  13. Nitrogen reduction pathways in estuarine sediments: Influences of organic carbon and sulfide

    Science.gov (United States)

    Plummer, Patrick; Tobias, Craig; Cady, David

    2015-10-01

    Potential rates of sediment denitrification, anaerobic ammonium oxidation (anammox), and dissimilatory nitrate reduction to ammonium (DNRA) were mapped across the entire Niantic River Estuary, CT, USA, at 100-200 m scale resolution consisting of 60 stations. On the estuary scale, denitrification accounted for ~ 90% of the nitrogen reduction, followed by DNRA and anammox. However, the relative importance of these reactions to each other was not evenly distributed through the estuary. A Nitrogen Retention Index (NIRI) was calculated from the rate data (DNRA/(denitrification + anammox)) as a metric to assess the relative amounts of reactive nitrogen being recycled versus retained in the sediments following reduction. The distribution of rates and accompanying sediment geochemical analytes suggested variable controls on specific reactions, and on the NIRI, depending on position in the estuary and that these controls were linked to organic carbon abundance, organic carbon source, and pore water sulfide concentration. The relationship between NIRI and organic carbon abundance was dependent on organic carbon source. Sulfide proved the single best predictor of NIRI, accounting for 44% of its observed variance throughout the whole estuary. We suggest that as a single metric, sulfide may have utility as a proxy for gauging the distribution of denitrification, anammox, and DNRA.

  14. Sequential Enrichment with Titania-coated Magnetic Mesoporous Hollow Silica Microspheres and Zirconium Arsenate-modified Magnetic Nanoparticles for the Study of Phosphoproteome of HL60 Cells

    Science.gov (United States)

    Yu, Qiong-Wei; Li, Xiao-Shui; Xiao, Yongsheng; Guo, Lei; Zhang, Fan; Cai, Qian; Feng, Yu-Qi; Yuan, Bi-Feng; Wang, Yinsheng

    2014-01-01

    As one of the most important types of post-translational modifications, reversible phosphorylation of proteins plays crucial roles in a large number of biological processes. However, owing to the relatively low abundance and dynamic nature of phosphorylation and the presence of the unphosphorylated peptides in large excess, phosphopeptide enrichment is indispensable in large-scale phosphoproteomic analysis. Metal oxides including titanium dioxide have become prominent affinity materials to enrich phosphopeptides prior to their analysis using liquid chromatography-mass spectrometry (LC-MS). In the current study, we established a novel strategy, which encompassed strong cation exchange chromatography, sequential enrichment of phosphopeptides using titania-coated magnetic mesoporous hollow silica microspheres (TiO2/MHMSS) and zirconium arsenate-modified magnetic nanoparticles (ZrAs-Fe3O4@SiO2), and LC-MS/MS analysis, for the proteome-wide identification of phosphosites of proteins in HL60 cells. In total, we were able to identify 11579 unique phosphorylation sites in 3432 unique proteins. Additionally, our results suggested that TiO2/MHMSS and ZrAs-Fe3O4@SiO2 are complementary in phosphopeptide enrichment, where the two types of materials displayed preferential binding of peptides carrying multiple and single phosphorylation sites, respectively. PMID:25262027

  15. Synthesis, crystal structure, electrical properties, and sodium transport pathways of the new arsenate Na4Co7(AsO4)6

    Science.gov (United States)

    Ben Smida, Youssef; Marzouki, Riadh; Georges, Samuel; Kutteh, Ramzi; Avdeev, Maxim; Guesmi, Abderrahmen; Zid, Mohamed Faouzi

    2016-07-01

    A new sodium cobalt (II) arsenate Na4Co7(AsO4)6 has been synthesized by a solid-state reaction and its crystal structure determined from single crystal X-ray diffraction data. It crystallizes in the monoclinic system, space group C2/m, with a=10.7098(9) Å, b=14.7837(9) Å, c=6.6845(7) Å, and β=105.545(9)°. The structure is described as a three-dimensional framework built up of corner-edge sharing CoO6, CoO4 and AsO4 polyhedra, with interconnecting channels along [100] in which the Na+ cations are located. The densest ceramics with relative density of 94% was obtained by ball milling and optimization of sintering temperature, and its microstructure characterized by scanning electron microscopy. The electrical properties of the ceramics were studied over a temperature interval from 280 °C to 560 °C using the complex impedance spectroscopy over the range of 13 MHz-5 Hz. The ionic bulk conductivity value of the sample at 360 °C is 2.51 10-5 S cm-1 and the measured activation energy is Ea=1 eV. The sodium migration pathways in the crystal structure were investigated computationally using the bond valence site energy (BVSE) model and classical molecular dynamics (MD) simulations.

  16. Intraspecific differences in effects of co-contamination of cadmium and arsenate on early seedling growth and metal uptake by wheat

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    A hydroponic experiment was carried out to study intraspecific differences in the effects of different concentrations of cadmium (Cd)(0-10 mg/L) and arsenate (As(V)) (0-8 mg/L) on the growth parameters and accumulation of Cd and As in six wheat varieties Jing-9428, Duokang-1, Jingdong-11, Jing-411, Jingdong-8 and Zhongmai-8. The endpoints of wheat seedlings, including seed germination,biomass, root length and shoot height, decreased with increasing the Cd and As concentrations. Significant differences in seed germination, biomass, root length, shoot height and the accumulation of Cd and As were observed between the treatments and among the varieties (p < 0.05). The lethal dosage 50% were about 20, 80, 60, 60, 80 and 20 mg As/L for Jing-9428, Duokang-1, Jingdong-11,Jing-411, Jingdong-8 and Zhongmai-8, respectively, and the corresponding values for Cd were about 30, 80, 20, 40, 60 and 10 mg Cd/L, respectively. Among the six varieties, Duokang-1 was found to be the most resistant to Cd and As toxicity, and Zhongmai-8 was the most sensitive to Cd and As co-contamination. The resistance of the six varieties was found dependant on the seedling uptake of Cd and As. Duokang-1 was the most suitable for cultivation in Cd and As co-contaminated soils.

  17. Fractionation of heavy metals in liquefied chromated copper arsenate 9-treated wood sludge using a modified BCR-sequential extraction procedure.

    Science.gov (United States)

    Pan, Hui; Hse, Chung-Yun; Gambrell, Robert; Shupe, Todd F

    2009-09-01

    Chromated copper arsenate (CCA)-treated wood was liquefied with polyethylene glycol/glycerin and sulfuric acid. After liquefaction, most CCA metals (98% As, 92% Cr, and 83% Cu) were removed from liquefied CCA-treated wood by precipitation with calcium hydroxide. The original CCA-treated wood and liquefied CCA-treated wood sludge were fractionated by a modified Community Bureau of Reference (BCR) sequential extraction procedure. The purpose of the BCR-sequential extraction used in this study was to examine the availability of CCA metals in treated wood for reuse. Both As and Cr had a slightly higher concentration in the sludge sample than in original CCA-treated wood. The sequential extraction showed that As and Cr were principally existed in an oxidizable fraction (As, 67%; Cr, 88%) in original CCA-treated wood. Only 1% of both As and Cr were extracted by hot nitric acid with the last extraction step. The distribution of As and Cr changed markedly in liquefied CCA-treated wood sludge. The amount of As in the exchangeable/acid extractable fraction increased from 16% to 85% while the amount of Cr increased from 3% to 54%. Only about 3% of As was present in the oxidizable fraction. However, there was still about 34% of Cr in the same fraction. Based on these results from sequential extraction procedures, it can be concluded that the accessibilities of CCA metals increase markedly by the liquefaction-precipitation process.

  18. Understanding the adsorptive interactions of arsenate-iron nanoparticles with curved fullerene-like sheets in activated carbon using a quantum mechanics/molecular mechanics computational approach.

    Science.gov (United States)

    Ha, Nguyen Ngoc; Cam, Le Minh; Ha, Nguyen Thi Thu; Goh, Bee-Min; Saunders, Martin; Jiang, Zhong-Tao; Altarawneh, Mohammednoor; Dlugogorski, Bogdan Z; El-Harbawi, Mohanad; Yin, Chun-Yang

    2017-06-07

    The prevalence of global arsenic groundwater contamination has driven widespread research on developing effective treatment systems including adsorption using various sorbents. The uptake of arsenic-based contaminants onto established sorbents such as activated carbon (AC) can be effectively enhanced via immobilization/impregnation of iron-based elements on the porous AC surface. Recent suggestions that AC pores structurally consist of an eclectic mix of curved fullerene-like sheets may affect the arsenic adsorption dynamics within the AC pores and is further complicated by the presence of nano-sized iron-based elements. We have therefore, attempted to shed light on the adsorptive interactions of arsenate-iron nanoparticles with curved fullerene-like sheets by using hybridized quantum mechanics/molecular mechanics (QMMM) calculations and microscopy characterization. It is found that, subsequent to optimization, chemisorption between HAsO4(2-) and the AC carbon sheet (endothermic process) is virtually non-existent - this observation is supported by experimental results. Conversely, the incorporation of iron nanoparticles (FeNPs) into the AC carbon sheet greatly facilitates chemisorption of HAsO4(2-). Our calculation implies that iron carbide is formed at the junction between the iron and the AC interface and this tightly chemosorbed layer prevents detachment of the FeNPs on the AC surface. Other aspects including electronic structure/properties, carbon arrangement defects and rate of adsorptive interaction, which are determined using the Climbing-Image NEB method, are also discussed.

  19. Sequential enrichment with titania-coated magnetic mesoporous hollow silica microspheres and zirconium arsenate-modified magnetic nanoparticles for the study of phosphoproteome of HL60 cells.

    Science.gov (United States)

    Yu, Qiong-Wei; Li, Xiao-Shui; Xiao, Yongsheng; Guo, Lei; Zhang, Fan; Cai, Qian; Feng, Yu-Qi; Yuan, Bi-Feng; Wang, Yinsheng

    2014-10-24

    As one of the most important types of post-translational modifications, reversible phosphorylation of proteins plays crucial roles in a large number of biological processes. However, owing to the relatively low abundance and dynamic nature of phosphorylation and the presence of the unphosphorylated peptides in large excess, phosphopeptide enrichment is indispensable in large-scale phosphoproteomic analysis. Metal oxides including titanium dioxide have become prominent affinity materials to enrich phosphopeptides prior to their analysis using liquid chromatography-mass spectrometry (LC-MS). In the current study, we established a novel strategy, which encompassed strong cation exchange chromatography, sequential enrichment of phosphopeptides using titania-coated magnetic mesoporous hollow silica microspheres (TiO2/MHMSS) and zirconium arsenate-modified magnetic nanoparticles (ZrAs-Fe3O4@SiO2), and LC-MS/MS analysis, for the proteome-wide identification of phosphosites of proteins in HL60 cells. In total, we were able to identify 11,579 unique phosphorylation sites in 3432 unique proteins. Additionally, our results suggested that TiO2/MHMSS and ZrAs-Fe3O4@SiO2 are complementary in phosphopeptide enrichment, where the two types of materials displayed preferential binding of peptides carrying multiple and single phosphorylation sites, respectively.

  20. Single-Cell Imaging and Spectroscopic Analyses of Cr(VI) Reduction on the Surface of Bacterial Cells

    Energy Technology Data Exchange (ETDEWEB)

    Wang, Yuanmin; Sevinc, Papatya C.; Belchik, Sara M.; Fredrickson, Jim K.; Shi, Liang; Lu, H. Peter

    2013-01-22

    We investigate single-cell reduction of toxic Cr(VI) by the dissimilatory metal-reducing bacterium Shewanella oneidensis MR-1 (MR-1), an important bioremediation process, using Raman spectroscopy and scanning electron microscopy (SEM) combined with energy-dispersive X-ray spectroscopy (EDX). Our experiments indicate that the toxic and highly soluble Cr(VI) can be efficiently reduced to the less toxic and non-soluble Cr2O3 nanoparticles by MR-1. Cr2O3 is observed to emerge as nanoparticles adsorbed on the cell surface and its chemical nature is identified by EDX imaging and Raman spectroscopy. Co-localization of Cr2O3 and cytochromes by EDX imaging and Raman spectroscopy suggests a terminal reductase role for MR-1 surface-exposed cytochromes MtrC and OmcA. Our experiments revealed that the cooperation of surface proteins OmcA and MtrC makes the reduction reaction most efficient, and the sequence of the reducing reactivity of the MR-1 is: wild type > single mutant @mtrC or mutant @omcA > double mutant (@omcA-@mtrC). Moreover, our results also suggest that the direct microbial Cr(VI) reduction and Fe(II) (hematite)-mediated Cr(VI) reduction mechanisms may co-exist in the reduction processes.

  1. Simultaneous reduction of nitrate and selenate by cell suspensions of selenium-respiring bacteria

    Science.gov (United States)

    Oremland, R.S.; Blum, J.S.; Bindi, A.B.; Dowdle, P.R.; Herbel, M.; Stolz, J.F.

    1999-01-01

    Washed-cell suspensions of Sulfurospirillum barnesii reduced selenate [Se(VI)] when cells were cultured with nitrate, thiosulfate, arsenate, or fumarate as the electron acceptor. When the concentration of the electron donor was limiting, Se(VI) reduction in whole cells was approximately fourfold greater in Se(VI)-grown cells than was observed in nitrate-grown cells; correspondingly, nitrate reduction was ~11-fold higher in nitrate-grown cells than in Se(VI)-grown cells. However, a simultaneous reduction of nitrate and Se(VI) was observed in both cases. At nonlimiting electron donor concentrations, nitrate- grown cells suspended with equimolar nitrate and selenate achieved a complete reductive removal of nitrogen and selenium oxyanions, with the bulk of nitrate reduction preceding that of selenate reduction. Chloramphenicol did not inhibit these reductions. The Se(VI)-respiring haloalkaliphile Bacillus arsenicoselenatis gave similar results, but its Se(VI) reductase was not constitutive in nitrate-grown cells. No reduction of Se(VI) was noted for Bacillus selenitireducens, which respires selenite. The results of kinetic experiments with cell membrane preparations of S. barnesii suggest the presence of constitutive selenate and nitrate reduction, as well as an inducible, high- affinity nitrate reductase in nitrate-grown cells which also has a low affinity for selenate. The simultaneous reduction of micromolar Se(VI) in the presence of millimolar nitrate indicates that these organisms may have a functional use in bioremediating nitrate-rich, seleniferous agricultural wastewaters. Results with 75Se-selenate tracer show that these organisms can lower ambient Se(VI) concentrations to levels in compliance with new regulations proposed for release of selenium oxyanions into the environment.

  2. Lymphedema Risk Reduction Practices

    Science.gov (United States)

    ... now! Position Paper: Lymphedema Risk Reduction Practices Category: Position Papers Tags: Risks Archives Treatment risk reduction garments surgery obesity infection blood pressure trauma morbid obesity body weight ...

  3. Characterization of Predominant Reductants in an Anaerobic Leachate-Contaminated Aquifer by Nitroaromatic Probe Compounds

    DEFF Research Database (Denmark)

    Rügge, Kirsten; Hofstetter, Thomas B.; Haderlein, Stefan B.;

    1998-01-01

    The biogeochemical processes controlling the reductive transformation of contaminants in an anaerobic aquifer were inferred from the relative reactivity patterns of redox-sensitive probe compounds. The fate of five nitroaromatic compounds (NACs) was monitored under different redox conditions in a...... results suggest that Fe(ll) associated with ferric iron minerals is a highly reactive reductant in anaerobic aquifers, which may also determine the fate of other classes of reducible contaminants such as halogenated solvents, azo compounds, sulfoxides, chromate, or arsenate....... in a landfill leachate plume of a sandy aquifer. Results of field experiments (continuous injection and in situ microcosms) were compared to the findings of laboratory batch and column experiments (using aquifer matrix and model systems for sulfate-and iron-reducing conditions). NACs were transformed within 2...... potential reductants (e.g., H(2)S/HS(-), Fe(II)(aq), reduced organic matter, microorganisms), the patterns of relative reactivity of the probe compounds indicated that ferrous iron associated with iron(lll) (hydr)oxide surfaces was the dominant reductant throughout the anaerobic region of the plume. Our...

  4. Exploring the Genome and Proteome of Desulfitobacterium hafniense DCB2 for its Protein Complexes Involved in Metal Reduction and Dechlorination

    Energy Technology Data Exchange (ETDEWEB)

    Sang-Hoon, Kim; Hardzman, Christina; Davis, John k.; Hutcheson, Rachel; Broderick, Joan B.; Marsh, Terence L.; Tiedje, James M.

    2012-09-27

    Desulfitobacteria are of interest to DOE mission because of their ability to reduce many electron acceptors including Fe(III), U(VI), Cr(VI), As(V), Mn(IV), Se(VI), NO3- and well as CO2, sulfite, fumarate and humates, their ability to colonize more stressful environments because they form spores, fix nitrogen and they have the more protective Gram positive cell walls. Furthermore at least some of them reductively dechlorinate aromatic and aliphatic pollutants. Importantly, most of the metals and the organochlorine reductions are coupled to ATP production and support growth providing for the organism's natural selection at DOE's contaminant sites. This work was undertaken to gain insight into the genetic and metabolic pathways involved in dissimilatory metal reduction and reductive dechlorination, (ii) to discern the commonalities among these electron-accepting processes, (iii) to identify multi-protein complexes catalyzing these functions and (iv) to elucidate the coordination in expression of these pathways and processes.

  5. Long-term fertilization alters the relative importance of nitrate reduction pathways in salt marsh sediments

    Science.gov (United States)

    Peng, Xuefeng; Ji, Qixing; Angell, John H.; Kearns, Patrick J.; Yang, Hannah J.; Bowen, Jennifer L.; Ward, Bess B.

    2016-08-01

    Salt marshes provide numerous valuable ecological services. In particular, nitrogen (N) removal in salt marsh sediments alleviates N loading to the coastal ocean. N removal reduces the threat of eutrophication caused by increased N inputs from anthropogenic sources. It is unclear, however, whether chronic nutrient overenrichment alters the capacity of salt marshes to remove anthropogenic N. To assess the effect of nutrient enrichment on N cycling in salt marsh sediments, we examined important N cycle pathways in experimental fertilization plots in a New England salt marsh. We determined rates of nitrification, denitrification, and dissimilatory nitrate reduction to ammonium (DNRA) using sediment slurry incubations with 15N labeled ammonium or nitrate tracers under oxic headspace (20% oxygen/80% helium). Nitrification and denitrification rates were more than tenfold higher in fertilized plots compared to control plots. By contrast, DNRA, which retains N in the system, was high in control plots but not detected in fertilized plots. The relative contribution of DNRA to total nitrate reduction largely depends on the carbon/nitrate ratio in the sediment. These results suggest that long-term fertilization shifts N cycling in salt marsh sediments from predominantly retention to removal.

  6. Control of Sulfidogenesis Through Bio-oxidation of H2S Coupled to (per)chlorate Reduction

    Energy Technology Data Exchange (ETDEWEB)

    Gregoire, Patrick [Univ. of California, Berkeley, CA (United States); Engelbrektson, Anna [Univ. of California, Berkeley, CA (United States); Hubbard, Christopher G. [Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States); Metlagel, Zoltan [Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States); Csencsits, Roseann [Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States); Auer, Manfred [Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States); Conrad, Mark E. [Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States); Thieme, Jurgen [Brookhaven National Lab. (BNL), Upton, NY (United States); Northrup, Paul [Brookhaven National Lab. (BNL), Upton, NY (United States); Coates, John D. [Univ. of California, Berkeley, CA (United States)

    2014-04-04

    Here, we investigate H2S attenuation by dissimilatory perchlorate-reducing bacteria (DPRB). All DPRB tested oxidized H2S coupled to (per)chlorate reduction without sustaining growth. H2S was preferentially utilized over organic electron donors resulting in an enriched (34S)-elemental sulfur product. Electron microscopy revealed elemental sulfur production in the cytoplasm and on the cell surface of the DPRB Azospira suillum. We also propose a novel hybrid enzymatic-abiotic mechanism for H2S oxidation similar to that recently proposed for nitrate-dependent Fe(II) oxidation. The results of this study have implications for the control of biosouring and biocorrosion in a range of industrial environments.

  7. Mg/Al双金属氧化物对As(V)吸附性能的研究%Adsorption of arsenate from aqueous solution by Mg/Al layered double oxide

    Institute of Scientific and Technical Information of China (English)

    孙媛媛; 曾希柏; 白玲玉

    2011-01-01

    研究了以镁铝水滑石为原料制备的Mg/Al双金属氧化物对溶液中As(V)的吸附作用及其影响因素.结果表明:Mg/Al双金属氧化物对As(V)具有较强的吸附能力,吸附规律符合Langmuir等温吸附方程,根据计算所得的理论最大吸附量为51.02 mg·g-1,与实验得出的最大吸附量50.53 mg·g-1基本一致;运用3种动力学方程对实验数据进行拟合,发现其吸附过程用准二级动力学方程表示时相关性最好;溶液的pH值显著影响吸附剂对As(V)的吸附,在pH=2时As(V)去除率最大;X射线衍射与扫描电镜结果显示,水滑石经过焙烧后丧失了原有的结构形成Mg/Al双金属氧化物,并在吸附砷酸根离子后重新恢复水滑石的部分层状结构,吸附机制主要为从溶液中获取阴离子以重建水滑石的晶体结构以及镁铝氧化物的共沉淀作用.%The adsorption characteristics of arsenate from aqueous solution by the Mg/Al layered double oxide ( Mg/Al-LDO) and its influencing factors, such as the pH of aqueous solution, dosage of Mg/Al-LDO, equilibrium isotherm and adsorption kinetic, were studied. The results showed that the adsorption of arsenate by Mg/Al-LDO was consistent with the Langmuir isotherm. The maximum adsorption capacity of Mg/Al-LDO for arsenate was 50. 53 mg ? G -1 , close to the stoichiometric adsorption ( 51.02 mg ? G -1 ) . Three kinetic models were used to fit the experimental data, indicating that the pseudo second-order kinetics model could better describe the adsorption process. The pH of arsenate solutions has an significant effect on the adsorption if As( V) with the maximum removal rate found at pH =2.0, The results by X-ray diffraction (XRD) and scanning electronic microscopy (SEM) showed that the Mg/Al-LDO lost a typical structure of layered double hydroxides after calcining, and then the partial layered structure of layered double hydroxides was recovered after adsorbing arsenate. The removal

  8. Single and combined effects of cadmium and arsenate in Gammarus pulex (Crustacea, Amphipoda): Understanding the links between physiological and behavioural responses

    Energy Technology Data Exchange (ETDEWEB)

    Vellinger, Céline, E-mail: celine.vellinger@gmail.com [Laboratoire Interdisciplinaire des Environnements Continentaux (LIEC), CNRS UMR 7360, Université de Lorraine – Metz (France); Gismondi, Eric, E-mail: gismondi.eric@gmail.com [Laboratoire d’Ecologie animale et d’Ecotoxicologie, Institut de Chimie, Université de Liège, Allée du 6 Août 15, B-4000 Sart-Tilman, Liège (Belgium); Felten, Vincent, E-mail: vincent.felten@univ-lorraine.fr [Laboratoire Interdisciplinaire des Environnements Continentaux (LIEC), CNRS UMR 7360, Université de Lorraine – Metz (France); Rousselle, Philippe, E-mail: rousselle@univ-lorraine.fr [Laboratoire Interdisciplinaire des Environnements Continentaux (LIEC), CNRS UMR 7360, Université de Lorraine – Metz (France); Mehennaoui, Kahina, E-mail: meh_kahina@yahoo.fr [Laboratoire Interdisciplinaire des Environnements Continentaux (LIEC), CNRS UMR 7360, Université de Lorraine – Metz (France); Parant, Marc, E-mail: parant@univ-lorraine.fr [Laboratoire Interdisciplinaire des Environnements Continentaux (LIEC), CNRS UMR 7360, Université de Lorraine – Metz (France); Usseglio-Polatera, Philippe, E-mail: usseglio-polatera@univ-lorraine.fr [Laboratoire Interdisciplinaire des Environnements Continentaux (LIEC), CNRS UMR 7360, Université de Lorraine – Metz (France)

    2013-09-15

    Highlights: •Linking physiological to behavioural responses of G. pulex exposed to AsV and/or Cd. •AsV and/or Cd exposure exhibited similar biomarkers responses. •Contamination increases the mobilization of detoxification systems in gammarids. •Both changes in energy reserve use and allocation are involved in gammarid response. •Increased lipid peroxidation could be the cause of increasing gammarid mortality. -- Abstract: This study aimed at investigating the individual and interactive effects of cadmium (Cd) and arsenate (AsV) in Gammarus pulex (Crustacea, Amphipoda) through the use of several biomarkers. Individuals were exposed for 240 h to two concentrations of AsV or Cd alone, and all the possible binary mixtures of these concentrations of AsV and Cd in a complete factorial design. The pattern of the biomarkers’ responses to Cd and AsV alone or in mixture was similar in Gammarus pulex, even if the response intensity varied depending on the tested conditions. G. pulex responded to contamination with increased mobilization of the detoxification systems [i.e. γ-glutamyl-cystein ligase activity (GCL), reduced glutathione content (GSH) and metallothionein concentrations (MT)]. This response seems to imply changes in energy reserve utilization (total lipids and proteins are used prior to glycogen reserves), but also a possible energy reallocation from locomotion to detoxification processes. The observed increase in lipid peroxidation could be relied to the increasing gammarid mortality, despite the higher mobilization of detoxification systems. Even if the outcome of the complex interactions between AsV and Cd remains difficult to unravel, such studies are critically important for better assessing the effects of stressors on organisms, populations and communities in a multi-contamination context of ecosystems.

  9. Fate of Arsenate adsorbed on Nano-TiO2 in the presence of sulfate reducing bacteria.

    Science.gov (United States)

    Luo, Ting; Tian, Haixia; Guo, Zhi; Zhuang, Guoqiang; Jing, Chuanyong

    2013-10-01

    Arsenic removal using nanomaterials has attracted increasing attention worldwide, whereas the potential release of As from spent nanomaterials to groundwater in reducing environments is presently underappreciated. This research investigated the fate of As(V) adsorbed on nano-TiO2 in the presence of sulfate reducing bacteria (SRB) Desulfovibrio vulgaris strains DP4 and ATCC 7757. The incubation results demonstrated that As(V) was desorbed from nano TiO2, and subsequently reduced to As(III) in aqueous solution. The release of adsorbed As(V) was two to three times higher in biotic samples than that in abiotic controls. Reduction of As(V) to As(III) in biotic samples was coupled with the conversion of sulfate to sulfide, while no As(III) was observed in abiotic controls. STXM results provided the direct evidence of appreciable As(III) and As(V) on TiO2. XANES analysis indicated that As(V) was the predominant species for three As loads of 150, 300, and 5700 mg/g, whereas 15-28% As precipitated as orpiment for a high As load of 5700 mg/g. In spite of orpiment formation, As mobilized in higher amounts in the SRB presence than in abiotic controls, highlighting the key role of SRB in the fate of As in the presence of nanomaterials.

  10. Reduction of Nitrate to Ammonium in Selected Paddy Soil of China

    Institute of Scientific and Technical Information of China (English)

    YINSHIXUE; SHENQIRONG; 等

    1998-01-01

    Three paddy soils soils were examined for their capacities of dissimilatory reduction of nitrate to ammonium (DRNA). 15N-labelled KNO3 was added at the rate of 100mg N kg-1 ,Either glucose or rice straw powder was incorporated at the rate of 1.0 or 2.0 mg C kg-1 respectively,Three treatments were designed to keep the soil saturated with water: A) a 2-cm water layer on soil surface (with beaker mouth open);B) a 2-cm water layer and a 1-cm liquild paraffin layer(with beaker mouth open);and C)water saturated under O2-free Ar atmosphere.The soils were inculated at 28 ℃ for 5 days,There eas alomst no 15N-labelled NH4+-N detected in Treatment A.However,there was 1.4 to 3.4mg N kg-1 15N-labelled NH4+-n in Treatment B and 2.1 to 13.8 mg N kg-1 in reatment C.Glucose was more effective than straw powder in ammonium production.Because there was sufficient amount of non-labelled NH4+-N in the original soils. 15N-labelled NH4+-N produced as such should be the result of dissimilatory reduction.Studies on microbial population showed that there were plenty of bacteria responisble for DRNA process(DRNA bacteria) in the soils examined,indicating that number of DNRA bacteia was not a limiting factor ammonium prodction.However,DRNA bacteria were inferior in number to denitrifiers.DRNA process in soil suspension seemed to start after 5 days of incubation.Glycerol and sodium succinate,thought both are readily available carbon sources to organisms,did not facilitate DNRA process.DRNA occurred only when glucose was available and at the C/NO3--N ratio of over 12 .It seemed that both availability and quality of the carbon sources affected DRNA.

  11. Vowel Reduction in Japanese

    Institute of Scientific and Technical Information of China (English)

    Shirai; Setsuko

    2009-01-01

    This paper reports the result that vowel reduction occurs in Japanese and vowel reduction is the part of the language universality.Compared with English,the effect of the vowel reduction in Japanese is relatively weak might because of the absence of stress in Japanese.Since spectral vowel reduction occurs in Japanese,various types of researches would be possible.

  12. Classification of waste wood treated with chromated copper arsenate and boron/fluorine preservatives; Classificacao de residuos de madeira tratada com preservativos a base de arseniato de cobre cromatado e de boro/fluor

    Energy Technology Data Exchange (ETDEWEB)

    Ferrarini, Suzana Frighetto; Santos, Heldiane Souza dos; Miranda, Luciana Gampert; Azevedo, Carla M.N.; Pires, Marcal J.R., E-mail: suzana.ferrarini@gmail.com [Faculdade de Quimica, Pontificia Universidade Catolica do Rio Grande do Sul, Porto Alegre, RS (Brazil); Maia, Sandra Maria [Instituto de Quimica, Universidade Federal do Rio Grande do Sul, Porto Alegre, RS (Brazil)

    2012-07-01

    Classification of waste wood treated with chromated copper arsenate (CCA) and boron/fluorine preservatives, according to NBR 10004, was investigated. The leaching test (ABNT NBR 10005) for As and Cr, and solubilization test (ABNT NBR 10006) for F, were applied to out-of-service wooden poles. Concentrations of As and Cr in leachates were determined by ICP-MS and of F by ESI. Values for As were higher than 1 mg L{sup -1} classifying the waste as hazardous material (Class I) whereas values for F (> 1.5 mg L{sup -1}) were non-hazardous but indicated non-inert material (Class IIA). (author)

  13. Infinitary Combinatory Reduction Systems: Normalising Reduction Strategies

    NARCIS (Netherlands)

    Ketema, Jeroen; Simonsen, Jakob Grue

    2010-01-01

    We study normalising reduction strategies for infinitary Combinatory Reduction Systems (iCRSs). We prove that all fair, outermost-fair, and needed-fair strategies are normalising for orthogonal, fully-extended iCRSs. These facts properly generalise a number of results on normalising strategies in fi

  14. Effects of aqueous complexation on reductive precipitation of uranium by Shewanella putrefaciens

    Directory of Open Access Journals (Sweden)

    Northup Abraham

    2004-10-01

    Full Text Available We have examined the effects of aqueous complexation on rates of dissimilatory reductive precipitation of uranium by Shewanella putrefaciens. Uranium(VI was supplied as sole terminal electron acceptor to Shewanella putrefaciens (strain 200R in defined laboratory media under strictly anaerobic conditions. Media were amended with different multidentate organic acids, and experiments were performed at different U(VI and ligand concentrations. Organic acids used as complexing agents were oxalic, malonic, succinic, glutaric, adipic, pimelic, maleic, citric, and nitrilotriacetic acids, tiron, EDTA, and Aldrich humic acid. Reductive precipitation of U(VI, resulting in removal of insoluble amorphous UO2 from solution, was measured as a function of time by determination of total dissolved U. Reductive precipitation was measured, rather than net U(VI reduction to U(IV, to assess overall U removal rates from solution, which may be used to gauge the influence of chelation on microbial U mineralization. Initial linear rates of U reductive precipitation were found to correlate with stability constants of 1:1 aqueous U(VI:ligand and U(IV:ligand complexes. In the presence of strongly complexing ligands (e.g., NTA, Tiron, EDTA, UO2 precipitation did not occur. Our results are consistent with ligand-retarded precipitation of UO2, which is analogous to ligand-assisted solid phase dissolution but in reverse: ligand exchange with the U4+ aquo cation acts as a rate-limiting reaction moderating coordination of water molecules with U4+, which is a necessary step in UO2 precipitation. Ligand exchange kinetics governing dissociation rates of ligands from U(VI-organic complexes may also influence overall UO2 production rates, although the magnitude of this effect is unclear relative to the effects of U(IV-organic complexation. Our results indicate that natural microbial-aqueous systems containing abundant organic matter can inhibit the formation of biogenic amorphous UO2.

  15. Controls on Arsenic Retention in Surface and Subsurface Environments: Resolving the Impact of Iron Reduction

    Science.gov (United States)

    Tufano, K.; Fendorf, S.

    2007-12-01

    A transition from oxidizing to reducing conditions has long been implicated in increasing aqueous As concentrations. Confounding processes controlling the release of As, reductive transformation of ferrihydrite, a common Fe(III) (hydr)oxide, has recently been shown to promote As retention rather than release. Elucidating the processes controlling As desorption and subsequent migration in surface and subsurface environments and how environmental factors (for example, availability of labile carbon and duration/extent of flooding) affect these processes will allow predictions to be made regarding long-term stability of As in soil and sediment. In turn, this can aid in evaluating the likelihood of having measurable As in groundwater. To better resolve these processes, here we examine As desorption from ferrihydrite-coated sands pre-sorbed with As(III) at circumneutral pH under Fe-reducing conditions with the dissimilatory iron reducing bacterium (DIRB) Shewanella putrefaciens strain CN- 32. We reveal that upon iron reduction, transformation of As-bearing ferrihydrite results in As(III) retention. However, over time there is a shift from reductive transformation to reductive dissolution of the As-bearing Fe phase(s) coupled with prolonged release of As to the aqueous phase. Our results suggest that arsenic retention may increase or decrease depending on the type of iron oxide, secondary iron transformations, and duration of reducing conditions. Immediately following a transition to anaerobic conditions there is potential for As retention on newly formed ferric/ferrous (hydr)oxide phases; however prolonged reduction will result in both the dissolution of ferric/ferrous (hydr)oxides and release of aqueous arsenic.

  16. Nitrate reduction to nitrite, nitric oxide and ammonia by gut bacteria under physiological conditions.

    Science.gov (United States)

    Tiso, Mauro; Schechter, Alan N

    2015-01-01

    The biological nitrogen cycle involves step-wise reduction of nitrogen oxides to ammonium salts and oxidation of ammonia back to nitrites and nitrates by plants and bacteria. Neither process has been thought to have relevance to mammalian physiology; however in recent years the salivary bacterial reduction of nitrate to nitrite has been recognized as an important metabolic conversion in humans. Several enteric bacteria have also shown the ability of catalytic reduction of nitrate to ammonia via nitrite during dissimilatory respiration; however, the importance of this pathway in bacterial species colonizing the human intestine has been little studied. We measured nitrite, nitric oxide (NO) and ammonia formation in cultures of Escherichia coli, Lactobacillus and Bifidobacterium species grown at different sodium nitrate concentrations and oxygen levels. We found that the presence of 5 mM nitrate provided a growth benefit and induced both nitrite and ammonia generation in E.coli and L.plantarum bacteria grown at oxygen concentrations compatible with the content in the gastrointestinal tract. Nitrite and ammonia accumulated in the growth medium when at least 2.5 mM nitrate was present. Time-course curves suggest that nitrate is first converted to nitrite and subsequently to ammonia. Strains of L.rhamnosus, L.acidophilus and B.longum infantis grown with nitrate produced minor changes in nitrite or ammonia levels in the cultures. However, when supplied with exogenous nitrite, NO gas was readily produced independently of added nitrate. Bacterial production of lactic acid causes medium acidification that in turn generates NO by non-enzymatic nitrite reduction. In contrast, nitrite was converted to NO by E.coli cultures even at neutral pH. We suggest that the bacterial nitrate reduction to ammonia, as well as the related NO formation in the gut, could be an important aspect of the overall mammalian nitrate/nitrite/NO metabolism and is yet another way in which the microbiome

  17. Local reduction in physics

    Science.gov (United States)

    Rosaler, Joshua

    2015-05-01

    A conventional wisdom about the progress of physics holds that successive theories wholly encompass the domains of their predecessors through a process that is often called "reduction." While certain influential accounts of inter-theory reduction in physics take reduction to require a single "global" derivation of one theory's laws from those of another, I show that global reductions are not available in all cases where the conventional wisdom requires reduction to hold. However, I argue that a weaker "local" form of reduction, which defines reduction between theories in terms of a more fundamental notion of reduction between models of a single fixed system, is available in such cases and moreover suffices to uphold the conventional wisdom. To illustrate the sort of fixed-system, inter-model reduction that grounds inter-theoretic reduction on this picture, I specialize to a particular class of cases in which both models are dynamical systems. I show that reduction in these cases is underwritten by a mathematical relationship that follows a certain liberalized construal of Nagel/Schaffner reduction, and support this claim with several examples. Moreover, I show that this broadly Nagelian analysis of inter-model reduction encompasses several cases that are sometimes cited as instances of the "physicist's" limit-based notion of reduction.

  18. Reduction in language testing

    DEFF Research Database (Denmark)

    Dimova, Slobodanka; Jensen, Christian

    2013-01-01

    /video recorded speech samples and written reports produced by two experienced raters after testing. Our findings suggest that reduction or reduction-like pronunciation features are found in tested L2 speech, but whenever raters identify and comment on such reductions, they tend to assess reductions negatively......This study represents an initial exploration of raters' comments and actual realisations of form reductions in L2 test speech performances. Performances of three L2 speakers were selected as case studies and illustrations of how reductions are evaluated by the raters. The analysis is based on audio...

  19. Intracellular precipitation of Pb by Shewanella putrefaciens CN32 during the reductive dissolution of Pb-jarosite.

    Science.gov (United States)

    Smeaton, Christina M; Fryer, Brian J; Weisener, Christopher G

    2009-11-01

    Jarosites (MFe(3)(SO(4))(2)(OH)(6)) are precipitated in the Zn industry to remove impurities during the extraction process and contain metals such as Pb and Ag. Jarosite wastes are often confined to capped tailings ponds, thereby creating potential for anaerobic reductive dissolution by microbial populations. This study demonstrates the reductive dissolution of synthetic Pb-jarosite (PbFe(6)(SO(4))(4)(OH)(12)) by a subsurface dissimilatory Fe reducing bacterium (Shewanella putrefaciens CN32) using batch experiments under anaerobic circumneutral conditions. Solution chemistry, pH, Eh, and cell viability were monitored over time and illustrated the reduction of released structural Fe(III) from the Pb-jarosite to Fe(II). Inoculated samples containing Pb-jarosite also demonstrated decreased cellular viability coinciding with increased Pb concentrations. SEM images showed progressive nucleation of electron dense nanoparticles on the surface of bacteria, identified by TEM/EDS as intracellular crystalline precipitates enriched in Pb and P. The intracellular precipitation of Pb by S. putrefaciens CN32 observed in this study provides potential new insight into the biogeochemical cycling of Pb in reducing environments.

  20. Isolation and characterization of Desulfitobacterium dehalogenans gen. nov., sp. nov., an anaerobic bacterium which reductively dechlorinates chlorophenolic compounds.

    Science.gov (United States)

    Utkin, I; Woese, C; Wiegel, J

    1994-10-01

    An organism that is able to reductively ortho-dechlorinate 2,4-dichlorophenol and 3-chloro-4-hydroxyphenylacetate (3-Cl-4-OHPA) was isolated from a methanogenic lake sediment. This organism, an anaerobic, motile, Gram-type-positive, rod-shaped bacterium, grew in the presence of 0.1% yeast extract when pyruvate, lactate, formate, or hydrogen was used as the electron donor for reductive dehalogenation of 3-Cl-4-OHPA. Sulfite, thiosulfate, and sulfur were reduced to sulfide, nitrate was reduced to nitrite, and fumarate was reduced to succinate. Dissimilatory reduction of sulfate could not be demonstrated, and no adenylylsulfate reductase was detected with an immunoassay. The organism fermented two pyruvate molecules to one lactate molecule, one acetate molecule, and one carbon dioxide molecule. The pH and temperature optima for both growth and dechlorination of 3-Cl-4-OHPA were 7.5 and 38 degrees C, respectively. The doubling time under these conditions was approximately 3.5 h. On the basis of the results of a 16S rRNA analysis and the inability of the organism to use sulfate as an electron acceptor, strain JW/IU-DC1 is described as the type strain of the new taxon Desulfitobacterium dehalogenans gen. nov., sp. nov.

  1. Modeling packed bed sorbent systems with the Pore Surface Diffusion Model: Evidence of facilitated surface diffusion of arsenate in nano-metal (hydr)oxide hybrid ion exchange media.

    Science.gov (United States)

    Dale, Sachie; Markovski, Jasmina; Hristovski, Kiril D

    2016-09-01

    This study explores the possibility of employing the Pore Surface Diffusion Model (PSDM) to predict the arsenic breakthrough curve of a packed bed system operated under continuous flow conditions with realistic groundwater, and consequently minimize the need to conduct pilot scale tests. To provide the nano-metal (hydr)oxide hybrid ion exchange media's performance in realistic water matrices without engaging in taxing pilot scale testing, the multi-point equilibrium batch sorption tests under pseudo-equilibrium conditions were performed; arsenate breakthrough curve of short bed column (SBC) was predicted by the PSDM in the continuous flow experiments; SBC tests were conducted under the same conditions to validate the model. The overlapping Freundlich isotherms suggested that the water matrix and competing ions did not have any denoting effect on sorption capacity of the media when the matrix was changed from arsenic-only model water to real groundwater. As expected, the PSDM provided a relatively good prediction of the breakthrough profile for arsenic-only model water limited by intraparticle mass transports. In contrast, the groundwater breakthrough curve demonstrated significantly faster intraparticle mass transport suggesting to a surface diffusion process, which occurs in parallel to the pore diffusion. A simple selection of DS=1/2 DP appears to be sufficient when describing the facilitated surface diffusion of arsenate inside metal (hydr)oxide nano-enabled hybrid ion-exchange media in presence of sulfate, however, quantification of the factors determining the surface diffusion coefficient's magnitude under different treatment scenarios remained unexplored.

  2. Equilibrium and kinetics study on removal of arsenate ions from aqueous solution by CTAB/TiO2 and starch/CTAB/TiO2 nanoparticles: a comparative study.

    Science.gov (United States)

    Gogoi, Pankaj; Dutta, Debasish; Maji, Tarun Kr

    2017-02-01

    We present a comparative study on the efficacy of TiO2 nanoparticles for arsenate ion removal after modification with CTAB (N-cetyl-N,N,N-trimethyl ammonium bromide) followed by coating with starch biopolymer. The prepared nanoparticles were characterized by Fourier transform infrared spectroscopy (FT-IR), X-ray diffractometry (XRD), thermogravimetry, scanning electron microscopy (SEM) and electron dispersive X-ray analysis (EDX). The removal efficiency was studied as a function of contact time, material dose and initial As(V) concentration. CTAB-modified TiO2 showed the highest arsenate ion removal rate (∼99% from 400 μg/L). Starch-coated CTAB-modified TiO2 was found to be best for regeneration. For a targeted solution of 400 μg/L, a material dose of 2 g/L was found to be sufficient to reduce the As(V) concentration below 10 μg/L. Equilibrium was established within 90 minutes of treatment. The sorption pattern followed a Langmuir monolayer pattern, and the maximum sorption capacity was found to be 1.024 mg/g and 1.423 mg/g after starch coating and after CTAB modification, respectively. The sorption mechanisms were governed by pseudo second order kinetics.

  3. Arsenate uptake and arsenite simultaneous sorption and oxidation by Fe-Mn binary oxides: influence of Mn/Fe ratio, pH, Ca2+, and humic acid.

    Science.gov (United States)

    Zhang, Gaosheng; Liu, Huijuan; Qu, Jiuhui; Jefferson, William

    2012-01-15

    Arsenate retention, arsenite sorption and oxidation on the surfaces of Fe-Mn binary oxides may play an important role in the mobilization and transformation of arsenic, due to the common occurrence of these oxides in the environment. However, no sufficient information on the sorption behaviors of arsenic on Fe-Mn binary oxides is available. This study investigated the influences of Mn/Fe molar ratio, solution pH, coexisting calcium ions, and humic acids have on arsenic sorption by Fe-Mn binary oxides. To create Fe-Mn binary oxides, simultaneous oxidation and co-precipitation methods were employed. The Fe-Mn binary oxides exhibited a porous crystalline structure similar to 2-line ferrihydrite at Mn/Fe ratios 1:3 and below, whereas exhibited similar structures to δ-MnO(2) at higher ratios. The As(V) sorption maximum was observed at a Mn/Fe ratio of 1:6, but As(III) uptake maximum was at Mn/Fe ratio 1:3. However, As(III) adsorption capacity was much higher than that of As(V) at each Mn/Fe ratio. As(V) sorption was found to decrease with increasing pH, while As(III) sorption edge was different, depending on the content of MnO(2) in the binary oxides. The presence of Ca(2+) enhanced the As(V) uptake under alkaline pH, but did not significantly influence the As(III) sorption by 1:9 Fe-Mn binary oxide; whereas the presence of humic acid slightly reduced both As(V) and As(III) uptake. These results indicate that As(III) is more easily immobilized than As(V) in the environment, where Fe-Mn binary oxides are available as sorbents and they represent attractive adsorbents for both As(V) and As(III) removal from water and groundwater. Copyright © 2011 Elsevier Inc. All rights reserved.

  4. Hydrogen sulfide alleviates toxic effects of arsenate in pea seedlings through up-regulation of the ascorbate-glutathione cycle: Possible involvement of nitric oxide.

    Science.gov (United States)

    Singh, Vijay Pratap; Singh, Samiksha; Kumar, Jitendra; Prasad, Sheo Mohan

    2015-06-01

    In plants, hydrogen sulfide (H2S) is an emerging novel signaling molecule that is involved in growth regulation and abiotic stress responses. However, little is known about its role in the regulation of arsenate (As(V)) toxicity. Therefore, hydroponic experiments were conducted to investigate whether sodium hydrosulfide (NaHS; a source of H2S) is involved in the regulation of As(V) toxicity in pea seedlings. Results showed that As(V) caused decreases in growth, photosynthesis (measured as chlorophyll fluorescence) and nitrogen content, which was accompanied by the accumulation of As. As(V) treatment also reduced the activities of cysteine desulfhydrase and nitrate reductase, and contents of H2S and nitric oxide (NO). However, addition of NaHS ameliorated As(V) toxicity in pea seedlings, which coincided with the increased contents of H2S and NO. The cysteine level was higher under As(V) treatment in comparison to all other treatments (As-free; NaHS; As(V)+NaHS). The content of reactive oxygen species (ROS) and damage to lipids, proteins and membranes increased by As(V) while NaHS alleviated these effects. Enzymes of the ascorbate-glutathione cycle (AsA-GSH cycle) showed inhibition of their activities following As(V) treatment while their activities were increased by application of NaHS. The redox status of ascorbate and glutathione was disturbed by As(V) as indicated by a steep decline in their reduced/oxidized ratios. However, simultaneous NaHS application restored the redox status of the ascorbate and glutathione pools. The results of this study demonstrated that H2S and NO might both be involved in reducing the accumulation of As and triggering up-regulation of the AsA-GSH cycle to counterbalance ROS-mediated damage to macromolecules. Furthermore, the results suggest a crucial role of H2S in plant priming, and in particular for pea seedlings in mitigating As(V) stress.

  5. In Situ Spectral Kinetics of Cr(VI) Reduction by c-Type Cytochromes in A Suspension of Living Shewanella putrefaciens 200

    Science.gov (United States)

    Liu, Tongxu; Li, Xiaomin; Li, Fangbai; Han, Rui; Wu, Yundang; Yuan, Xiu; Wang, Ying

    2016-07-01

    Although c-type cytochromes (c-Cyts) mediating metal reduction have been mainly investigated with in vitro purified proteins of dissimilatory metal reducing bacteria, the in vivo behavior of c-Cyts is still unclear given the difficulty in measuring the proteins of intact cells. Here, c-Cyts in living Shewanella putrefaciens 200 (SP200) was successfully quantified using diffuse-transmission UV/Vis spectroscopy due to the strong absorbance of hemes, and the in situ spectral kinetics of Cr(VI) reduction by c-Cyts were examined over time. The reduced product Cr(III) observed on the cell surface may play a role in inhibiting the Cr(VI) reduction and reducing the cell numbers with high concentrations (>200 μM) of Cr(VI) evidenced by the 16S rRNA analysis. A brief kinetic model was established with two predominant reactions, redox transformation of c-Cyts and Cr(VI) reduction by reduced c-Cyts, but the fitting curves were not well-matched with c-Cyts data. The Cr(III)-induced inhibitory effect to the cellular function of redox transformation of c-Cyts was then added to the model, resulting in substantially improved the model fitting. This study provides a case of directly examining the reaction properties of outer-membrane enzyme during microbial metal reduction processes under physiological conditions.

  6. Selenate reduction to elemental selenium by anaerobic bacteria in sediments and culture: biogeochemical significance of a novel, sulfate-independent respiration

    Science.gov (United States)

    Oremland, Ronald S.; Hollibaugh, James T.; Maest, Ann S.; Presser, Theresa S.; Miller, Laurence G.; Culbertson, Charles W.

    1989-01-01

    Interstitial water profiles of SeO42−, SeO32−, SO42−, and Cl− in anoxic sediments indicated removal of the seleno-oxyanions by a near-surface process unrelated to sulfate reduction. In sediment slurry experiments, a complete reductive removal of SeO42− occurred under anaerobic conditions, was more rapid with H2 or acetate, and was inhibited by O2, NO3−, MnO2, or autoclaving but not by SO42− or FeOOH. Oxidation of acetate in sediments could be coupled to selenate but not to molybdate. Reduction of selenate to elemental selenium was determined to be the mechanism for loss from solution. Selenate reduction was inhibited by tungstate and chromate but not by molybdate. A small quantity of the elemental selenium precipitated into sediments from solution could be resolublized by oxidation with either nitrate or FeOOH, but not with MnO2. A bacterium isolated from estuarine sediments demonstrated selenate-dependent growth on acetate, forming elemental selenium and carbon dioxide as respiratory end products. These results indicate that dissimilatory selenate reduction to elemental selenium is the major sink for selenium oxyanions in anoxic sediments. In addition, they suggest application as a treatment process for removing selenium oxyanions from wastewaters and also offer an explanation for the presence of selenite in oxic waters.

  7. Products of abiotic U(VI) reduction by biogenic magnetite and vivianite

    Science.gov (United States)

    Veeramani, Harish; Alessi, Daniel S.; Suvorova, Elena I.; Lezama-Pacheco, Juan S.; Stubbs, Joanne E.; Sharp, Jonathan O.; Dippon, Urs; Kappler, Andreas; Bargar, John R.; Bernier-Latmani, Rizlan

    2011-05-01

    Reductive immobilization of uranium by the stimulation of dissimilatory metal-reducing bacteria (DMRB) has been investigated as a remediation strategy for subsurface U(VI) contamination. In those environments, DMRB may utilize a variety of electron acceptors, such as ferric iron which can lead to the formation of reactive biogenic Fe(II) phases. These biogenic phases could potentially mediate abiotic U(VI) reduction. In this work, the DMRB Shewanella putrefaciens strain CN32 was used to synthesize two biogenic Fe(II)-bearing minerals: magnetite (a mixed Fe(II)-Fe(III) oxide) and vivianite (an Fe(II)-phosphate). Analysis of abiotic redox interactions between these biogenic minerals and U(VI) showed that both biogenic minerals reduced U(VI) completely. XAS analysis indicates significant differences in speciation of the reduced uranium after reaction with the two biogenic Fe(II)-bearing minerals. While biogenic magnetite favored the formation of structurally ordered, crystalline UO 2, biogenic vivianite led to the formation of a monomeric U(IV) species lacking U-U associations in the corresponding EXAFS spectrum. To investigate the role of phosphate in the formation of monomeric U(IV) such as sorbed U(IV) species complexed by mineral surfaces, versus a U(IV) mineral, uranium was reduced by biogenic magnetite that was pre-sorbed with phosphate. XAS analysis of this sample also revealed the formation of monomeric U(IV) species suggesting that the presence of phosphate hinders formation of UO 2. This work shows that U(VI) reduction products formed during in situ biostimulation can be influenced by the mineralogical and geochemical composition of the surrounding environment, as well as by the interfacial solute-solid chemistry of the solid-phase reductant.

  8. Microbial Reduction of Chromate in the presence of Nitrate by Three Nitrate Respiring Organisms.

    Directory of Open Access Journals (Sweden)

    Peter eChovanec

    2012-12-01

    Full Text Available A major challenge for the bioremediation of toxic metals is the co-occurrence of nitrate, as it can inhibit metal transformation. Geobacter metallireducens, Desulfovibrio desulfuricans, and Sulfurospirillum barnesii are three soil bacteria that can reduce chromate (Cr(VI and nitrate, and may be beneficial for developing bioremediation strategies. All three organisms respire through dissimilatory nitrate reduction to ammonia (DNRA, employing different nitrate reductases but similar nitrite reductase (Nrf. G. metallireducens reduces nitrate to nitrite via the membrane bound nitrate reductase (Nar, while S. barnesii and D. desulfuricans strain 27774 have slightly different forms of periplasmic nitrate reductase (Nap. We investigated the effect of DNRA growth in the presence of Cr(VI in these three organisms and the ability of each to reduce Cr(VI to Cr(III, and each organisms responded differently. Growth of G. metallireducens on nitrate was completely inhibited by Cr(VI. Cultures of D. desulfuricans on nitrate media was initially delayed (48 h in the presence of Cr(VI, but ultimately reached comparable cell yields to the non-treated control. This prolonged lag phase accompanied the transformation of Cr(VI to Cr(III. Viable G. metallireducens cells could reduce Cr(VI, whereas Cr(VI reduction by D. desulfuricans during growth, was mediated by a filterable and heat stable extracellular metabolite. S. barnesii growth on nitrate was not affected by Cr(VI, and Cr(VI was reduced to Cr(III. However, Cr(VI reduction activity in S. barnesii, was detected in both the cell free spent medium and cells, indicating both extracellular and cell associated mechanisms. Taken together, these results have demonstrated that Cr(VI affects DNRA in the three organisms differently, and that each have a unique mechanism for Cr(VI reduction.

  9. Modern Reduction Methods

    CERN Document Server

    Andersson, Pher G

    2008-01-01

    With its comprehensive overview of modern reduction methods, this book features high quality contributions allowing readers to find reliable solutions quickly and easily. The monograph treats the reduction of carbonyles, alkenes, imines and alkynes, as well as reductive aminations and cross and heck couplings, before finishing off with sections on kinetic resolutions and hydrogenolysis. An indispensable lab companion for every chemist.

  10. Aggregate-scale spatial heterogeneity in reductive transformation of ferrihydrite resulting from coupled biogeochemical and physical processes

    Science.gov (United States)

    Pallud, C.; Masue-Slowey, Y.; Fendorf, S.

    2010-05-01

    Iron (hydr)oxides are ubiquitous in soils and sediments and play a dominant role in the geochemistry of surface and subsurface environments. Their fate depends on local environmental conditions, which in structured soils may vary significantly over short distances due to mass-transfer limitations on solute delivery and metabolite removal. In the present study, artificial soil aggregates were used to investigate the coupling of physical and biogeochemical processes affecting the spatial distribution of iron (Fe) phases resulting from reductive transformation of ferrihydrite. Spherical aggregates made of ferrihydrite-coated sand were inoculated with the dissimilatory Fe-reducing bacterium Shewanella putrefaciens strain CN-32, and placed into a flow reactor, the reaction cell simulates a diffusion-dominated soil aggregate surrounded by an advective flow domain. The spatial and temporal evolution of secondary mineralization products resulting from dissimilatory Fe reduction of ferrihydrite were followed within the aggregates in response to a range of flow rates and lactate concentrations. Strong radial variations in the distribution of secondary phases were observed owing to diffusively controlled delivery of lactate and efflux of Fe(II) and bicarbonate. In the aggregate cortex, only limited formation of secondary Fe phases were observed over 30 d of reaction, despite high rates of ferrihydrite reduction. Under all flow conditions tested, ferrihydrite transformation was limited in the cortex (70-85 mol.% Fe remained as ferrihydrite) because metabolites such as Fe(II) and bicarbonate were efficiently removed in outflow solutes. In contrast, within the inner fractions of the aggregate, limited mass-transfer results in metabolite (Fe(II) and bicarbonate) build-up and the consummate transformation of ferrihydrite - only 15-40 mol.% Fe remained as ferrihydrite after 30 d of reaction. Goethite/lepidocrocite, and minor amounts of magnetite, formed in the aggregate mid

  11. Speciation-Dependent Microbial Reduction of Uranium Within Iron-Coated Sands

    Energy Technology Data Exchange (ETDEWEB)

    Neiss, J.; Stewart, B.D.; Nico, P.S.; Fendorf, S.

    2009-06-03

    Transport of uranium within surface and subsurface environments is predicated largely on its redox state. Uranyl reduction may transpire through either biotic (enzymatic) or abiotic pathways; in either case, reduction of U(VI) to U(IV) results in the formation of sparingly soluble UO{sub 2} precipitates. Biological reduction of U(VI), while demonstrated as prolific under both laboratory and field conditions, is influenced by competing electron acceptors (such as nitrate, manganese oxides, or iron oxides) and uranyl speciation. Formation of Ca-UO{sub 2}-CO{sub 3} ternary complexes, often the predominate uranyl species in carbonate-bearing soils and sediments, decreases the rate of dissimilatory U(VI) reduction. The combined influence of uranyl speciation within a mineralogical matrix comparable to natural environments and under hydrodynamic conditions, however, remains unresolved. We therefore examined uranyl reduction by Shewanella putrefaciens within packed mineral columns of ferrihydrite-coated quartz sand under conditions conducive or nonconducive to Ca-UO{sub 2}-CO{sub 3} species formation. The results are dramatic. In the absence of Ca, where uranyl carbonato complexes dominate, U(VI) reduction transpires and consumes all of the U(VI) within the influent solution (0.166 mM) over the first 2.5 cm of the flow field for the entirety of the 54 d experiment. Over 2 g of U is deposited during this reaction period, and despite ferrihydrite being a competitive electron acceptor, uranium reduction appears unabated for the duration of our experiments. By contrast, in columns with 4 mM Ca in the influent solution (0.166 mM uranyl), reduction (enzymatic or surface-bound Fe(ll) mediated) appears absent and breakthrough occurs within 18 d (at a flow rate of 3 pore volumes per day). Uranyl speciation, and in particular the formation of ternary Ca-UO2-CO3 complexes, has a profound impact on U(VI) reduction and thus transport within anaerobic systems.

  12. Fe(III) oxides accelerate microbial nitrate reduction and electricity generation by Klebsiella pneumoniae L17.

    Science.gov (United States)

    Liu, Tongxu; Li, Xiaomin; Zhang, Wei; Hu, Min; Li, Fangbai

    2014-06-01

    Klebsiella pneumoniae L17 is a fermentative bacterium that can reduce iron oxide and generate electricity under anoxic conditions, as previously reported. This study reveals that K. pneumoniae L17 is also capable of dissimilatory nitrate reduction, producing NO2(-), NH4(+), NO and N2O under anoxic conditions. The presence of Fe(III) oxides (i.e., α-FeOOH, γ-FeOOH, α-Fe2O3 and γ-Fe2O3) significantly accelerates the reduction of nitrate and generation of electricity by K. pneumoniae L17, which is similar to a previous report regarding another fermentative bacterium, Bacillus. No significant nitrate reduction was observed upon treatment with Fe(2+) or α-FeOOH+Fe(2+), but a slight facilitation of nitrate reduction and electricity generation was observed upon treatment with L17+Fe(2+). This result suggests that aqueous Fe(II) or mineral-adsorbed Fe(II) cannot reduce nitrate abiotically but that L17 can catalyze the reduction of nitrate and generation of electricity in the presence of Fe(II) (which might exist as cell surface-bound Fe(II)). To rule out the potential effect of Fe(II) produced by L17 during microbial iron reduction, treatments with the addition of TiO2 or Al2O3 instead of Fe(III) oxides also exhibited accelerated microbial nitrate reduction and electricity generation, indicating that cell-mineral sorption did account for the acceleration effect. However, the acceleration caused by Fe(III) oxides is only partially attributed to the cell surface-bound Fe(II) and cell-mineral sorption but may be driven by the iron oxide conduction band-mediated electron transfer from L17 to nitrate or an electrode, as proposed previously. The current study extends the diversity of bacteria of which nitrate reduction and electricity generation can be facilitated by the presence of iron oxides and confirms the positive role of Fe(III) oxides on microbial nitrate reduction and electricity generation by particular fermentative bacteria in anoxic environments. Copyright

  13. Bacterial respiration of arsenic and selenium

    Science.gov (United States)

    Stolz, J.F.; Oremland, R.S.

    1999-01-01

    Oxyanions of arsenic and selenium can be used in microbial anaerobic respiration as terminal electron acceptors. The detection of arsenate and selenate respiring bacteria in numerous pristine and contaminated environments and their rapid appearance in enrichment culture suggest that they are widespread and metabolically active in nature. Although the bacterial species that have been isolated and characterized are still few in number, they are scattered throughout the bacterial domain and include Gram- positive bacteria, beta, gamma and epsilon Proteobacteria and the sole member of a deeply branching lineage of the bacteria, Chrysiogenes arsenatus. The oxidation of a number of organic substrates (i.e. acetate, lactate, pyruvate, glycerol, ethanol) or hydrogen can be coupled to the reduction of arsenate and selenate, but the actual donor used varies from species to species. Both periplasmic and membrane-associated arsenate and selenate reductases have been characterized. Although the number of subunits and molecular masses differs, they all contain molybdenum. The extent of the environmental impact on the transformation and mobilization of arsenic and selenium by microbial dissimilatory processes is only now being fully appreciated.

  14. ON THE SYMPLECTIC REDUCTIONS

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    A symplectic reduction method for symplectic G-spaces is given in this paper without using the existence of momentum mappings.By a method similar to the above one,the arthors give a symplectic reduction method for the Poisson action of Poisson Lie groups on symplectic manifolds,also without using the existence of momentum mappings.The symplectic reduction method for momentum mappings is thus a special case of the above results.

  15. Fe(II)EDTA-NO reduction coupled with Fe(II)EDTA oxidation by a nitrate- and Fe(III)-reducing bacterium.

    Science.gov (United States)

    Dong, Xiyang; Zhang, Yu; Zhou, Jiti; Chen, Mingxiang; Wang, Xiaojun; Shi, Zhuang

    2013-06-01

    The nitrate- and Fe(III)-reducing bacterium Paracoccus versutus LYM was characterized in terms of its ability to perform Fe(II)EDTA-NO reduction coupled with Fe(II)EDTA oxidation (NO-dependent Fe(II)EDTA oxidation, NDFO). It experienced a single anaerobic FeEDTA redox cycling through NDFO and dissimilatory Fe(III)EDTA reduction in FeEDTA culture. The increase in the Fe(II)EDTA concentration contributed to the ascending Fe(II)EDTA-NO reduction rate. The amount of glucose controlled the rate and extent of Fe(II) oxidation during NDFO. Without glucose addition, Fe(II)EDTA-NO reduction rate was at a rather slow rate even in presence of relatively sufficient Fe(II)EDTA. Unlike aqueous Fe(2+) and solid-phase Fe(II), Fe(II)EDTA could prevent cells from encrustations. These findings suggested the occurrence of NDFO preferred being beneficial via a mixotrophic physiology in the presence of an organic cosubstrate to being out of consideration for metabolic strategy.

  16. Growth of the facultative anaerobe Shewanella putrefaciens by elemental sulfur reduction

    Science.gov (United States)

    Moser, D. P.; Nealson, K. H.

    1996-01-01

    The growth of bacteria by dissimilatory elemental sulfur reduction is generally associated with obligate anaerobes and thermophiles in particular. Here we describe the sulfur-dependent growth of the facultatively anaerobic mesophile Shewanella putrefaciens. Six of nine representative S. putrefaciens isolates from a variety of environments proved able to grow by sulfur reduction, and strain MR-1 was chosen for further study. Growth was monitored in a minimal medium (usually with 0.05% Casamino Acids added as a growth stimulant) containing 30 mM lactate and limiting concentrations of elemental sulfur. When mechanisms were provided for the removal of the metabolic end product, H2S, measurable growth was obtained at sulfur concentrations of from 2 to 30 mM. Initial doubling times were ca. 1.5 h and substrate independent over the range of sulfur concentrations tested. In the cultures with the highest sulfur concentrations, cell numbers increased by greater than 400-fold after 48 h, reaching a maximum density of 6.8 x 10(8) cells ml-1. Yields were determined as total cell carbon and ranged from 1.7 to 5.9 g of C mol of S(0) consumed-1 in the presence of the amino acid supplement and from 0.9 to 3.4 g of C mol of S(0-1) in its absence. Several lines of evidence indicate that cell-to-sulfur contact is not required for growth. Approaches for the culture of sulfur-metabolizing bacteria and potential ecological implications of sulfur reduction in Shewanella-like heterotrophs are discussed.

  17. Microbial Fe(III) oxide reduction potential in Chocolate Pots hot spring, Yellowstone National Park.

    Science.gov (United States)

    Fortney, N W; He, S; Converse, B J; Beard, B L; Johnson, C M; Boyd, E S; Roden, E E

    2016-05-01

    Chocolate Pots hot springs (CP) is a unique, circumneutral pH, iron-rich, geothermal feature in Yellowstone National Park. Prior research at CP has focused on photosynthetically driven Fe(II) oxidation as a model for mineralization of microbial mats and deposition of Archean banded iron formations. However, geochemical and stable Fe isotopic data have suggested that dissimilatory microbial iron reduction (DIR) may be active within CP deposits. In this study, the potential for microbial reduction of native CP Fe(III) oxides was investigated, using a combination of cultivation dependent and independent approaches, to assess the potential involvement of DIR in Fe redox cycling and associated stable Fe isotope fractionation in the CP hot springs. Endogenous microbial communities were able to reduce native CP Fe(III) oxides, as documented by most probable number enumerations and enrichment culture studies. Enrichment cultures demonstrated sustained DIR driven by oxidation of acetate, lactate, and H2 . Inhibitor studies and molecular analyses indicate that sulfate reduction did not contribute to observed rates of DIR in the enrichment cultures through abiotic reaction pathways. Enrichment cultures produced isotopically light Fe(II) during DIR relative to the bulk solid-phase Fe(III) oxides. Pyrosequencing of 16S rRNA genes from enrichment cultures showed dominant sequences closely affiliated with Geobacter metallireducens, a mesophilic Fe(III) oxide reducer. Shotgun metagenomic analysis of enrichment cultures confirmed the presence of a dominant G. metallireducens-like population and other less dominant populations from the phylum Ignavibacteriae, which appear to be capable of DIR. Gene (protein) searches revealed the presence of heat-shock proteins that may be involved in increased thermotolerance in the organisms present in the enrichments as well as porin-cytochrome complexes previously shown to be involved in extracellular electron transport. This analysis offers

  18. Significant role of organic sulfur in supporting sedimentary sulfate reduction in low-sulfate environments

    Science.gov (United States)

    Fakhraee, Mojtaba; Li, Jiying; Katsev, Sergei

    2017-09-01

    Dissimilatory sulfate reduction (DSR) is a major carbon mineralization pathway in aquatic sediments, soils, and groundwater, which regulates the production of hydrogen sulfide and the mobilization rates of biologically important elements such as phosphorus and mercury. It has been widely assumed that water-column sulfate is the main sulfur source to fuel this reaction in sediments. While this assumption may be justified in high-sulfate environments such as modern seawater, we argue that in low-sulfate environments mineralization of organic sulfur compounds can be an important source of sulfate. Using a reaction-transport model, we investigate the production of sulfate from sulfur-containing organic matter for a range of environments. The results show that in low sulfate environments (50%) of sulfate reduction. In well-oxygenated systems, porewater sulfate profiles often exhibit sub-interface peaks so that sulfate fluxes are directed out of the sediment. Our measurements in Lake Superior, the world's largest lake, corroborate this conclusion: offshore sediments act as sources rather than sinks of sulfate for the water column, and sediment DSR is supported entirely by the in-sediment production of sulfate. Sulfate reduction rates are correlated to the depth of oxygen penetration and strongly regulated by the supply of reactive organic matter; rate co-regulation by sulfate availability becomes appreciable below 500 μM level. The results indicate the need to consider the mineralization of organic sulfur in the biogeochemical cycling in low-sulfate environments, including several of the world's largest freshwater bodies, deep subsurface, and possibly the sulfate-poor oceans of the Early Earth.

  19. Finding optimal exact reducts

    KAUST Repository

    AbouEisha, Hassan M.

    2014-01-01

    The problem of attribute reduction is an important problem related to feature selection and knowledge discovery. The problem of finding reducts with minimum cardinality is NP-hard. This paper suggests a new algorithm for finding exact reducts with minimum cardinality. This algorithm transforms the initial table to a decision table of a special kind, apply a set of simplification steps to this table, and use a dynamic programming algorithm to finish the construction of an optimal reduct. I present results of computer experiments for a collection of decision tables from UCIML Repository. For many of the experimented tables, the simplification steps solved the problem.

  20. CARBON DIOXIDE REDUCTION SYSTEM.

    Science.gov (United States)

    CARBON DIOXIDE , *SPACE FLIGHT, RESPIRATION, REDUCTION(CHEMISTRY), RESPIRATION, AEROSPACE MEDICINE, ELECTROLYSIS, INSTRUMENTATION, ELECTROLYTES, VOLTAGE, MANNED, YTTRIUM COMPOUNDS, ZIRCONIUM COMPOUNDS, NICKEL.

  1. Fate of Fe and Cd upon microbial reduction of Cd-loaded polyferric flocs by Shewanella oneidensis MR-1.

    Science.gov (United States)

    Li, Chenchen; Yi, Xiaoyun; Dang, Zhi; Yu, Hui; Zeng, Tao; Wei, Chaohai; Feng, Chunhua

    2016-02-01

    Polyferric sulphate has been widely used for emergent control on incidental release of heavy metals such as Cd to surface water, causing precipitation of Cd-loaded polyferric flocs to the sediment. To date, little is known about whether the dissolution of the flocs in the presence of dissimilatory iron reducing bacteria (DIRB) can occur and how the dissolution influences the fate of Fe and Cd in the sediment. Here, we demonstrated that Shewanella oneidensis MR-1, as representative DIRB, has the ability to reduce the flocs, resulting in the release of Fe(2+) and Cd(2+) to the solution. Batch experiment results showed that the concentrations of Fe(2+) and Cd(2+)reached the maximum values at 48 h and then decreased over the remaining incubation time. The characterizations on the solid phase by the scanning electron microscopy coupled with energy dispersive spectrometer, X-ray diffraction, and X-ray photoelectron spectroscopy technologies revealed the formation of iron minerals such as goethite and magnetite as a consequence of microbial Fe(III) reduction. The newly formed iron minerals played a significant role in re-immobilizing Cd by sorption. These results imply that microbial reduction of polyferric flocs is an important contributor to the transport and transformation of metals in the sediment-water interface.

  2. Strategies for poverty reduction

    OpenAIRE

    Øyen, Else

    2003-01-01

    SIU konferanse Solstrand 6.-7. October 2003 Higher education has a value of its own. When linked to the issue of poverty reduction it is necessary to ask another set of questions, including the crutial one whether higher education in general is the best tool for poverty reduction.

  3. Strategies for poverty reduction

    OpenAIRE

    Øyen, Else

    2003-01-01

    SIU konferanse Solstrand 6.-7. October 2003 Higher education has a value of its own. When linked to the issue of poverty reduction it is necessary to ask another set of questions, including the crutial one whether higher education in general is the best tool for poverty reduction.

  4. Reduct and Attribute Order

    Institute of Scientific and Technical Information of China (English)

    Su-Qing Han; Jue Wang

    2004-01-01

    Based on the principle of discernibility matrix,a kind of reduction algorithm with attribute order has been developed and its solution has been proved to be complete for reduct and unique for a given attribute order.Being called the reduct problem,this algorithm can be regarded as a mapping R = Reduct(S)from the attribute order space θ to the reduct space R for an information system ,where U is the universe and C and D are two sets of condition and decision attributes respectively.This paper focuses on the reverse problem of reduct problem S = Order(R),i.e.,for a given reduct R of an information system,we determine the solution of S = Order(R)in the space θ.First,we need to prove that there is at least one attribute order S such that S = Order(R).Then,some decision rules are proposed,which can be used directly to decide whether the pair of attribute orders has the same reduct.The main method is based on the fact that an attribute order can be transformed into another one by moving the attribute for limited times.Thus,the decision of the pair of attribute orders can be altered to the decision of the sequence of neighboring pairs of attribute orders.Therefore,the basic theorem of neighboring pair of attribute orders is first proved,then,the decision theorem of attribute order is proved accordingly by the second attribute.

  5. Synthesis and Characterization of 8-Yttrium(III-Containing 81-Tungsto-8-Arsenate(III, [Y8(CH3COO(H2O18(As2W19O684(W2O62(WO4]43−

    Directory of Open Access Journals (Sweden)

    Masooma Ibrahim

    2015-06-01

    Full Text Available The 8-yttrium(III-containing 81-tungsto-8-arsenate(III [Y8(CH3COO(H2O18(As2W19O684(W2O62(WO4]43− (1 has been synthesized in a one-pot reaction of yttrium(III ions with [B-α-AsW9O33]9− in 1 M NaOAc/HOAc buffer at pH 4.8. Polyanion 1 is composed of four {As2W19O68} units, two {W2O10} fragments, one {WO6} group, and eight YIII ions. The hydrated cesium-sodium salt of 1 (CsNa-1 was characterized in the solid-state by single-crystal XRD, FT-IR spectroscopy, thermogravimetric and elemental analyses.

  6. New M+, M3+-arsenates – the framework structures of AgM3+(HAsO42 (M3+ = Al, Ga and M+GaAs2O7 (M+ = Na, Ag

    Directory of Open Access Journals (Sweden)

    Karolina Schwendtner

    2017-05-01

    Full Text Available The crystal structures of hydrothermally synthesized silver(I aluminium bis[hydrogen arsenate(V], AgAl(HAsO42, silver(I gallium bis[hydrogen arsenate(V], AgGa(HAsO42, silver gallium diarsenate(V, AgGaAs2O7, and sodium gallium diarsenate(V, NaGaAs2O7, were determined from single-crystal X-ray diffraction data collected at room temperature. The first two compounds are representatives of the MCV-3 structure type known for KSc(HAsO42, which is characterized by a three-dimensional anionic framework of corner-sharing alternating M3+O6 octahedra (M = Al, Ga and singly protonated AsO4 tetrahedra. Intersecting channels parallel to [101] and [110] host the Ag+ cations, which are positionally disordered in the Ga compound, but not in the Al compound. The hydrogen bonds are relatively strong, with O...O donor–acceptor distances of 2.6262 (17 and 2.6240 (19 Å for the Al and Ga compounds, respectively. The two diarsenate compounds are representatives of the NaAlAs2O7 structure type, characterized by an anionic framework topology built of M3+O6 octahedra (M = Al, Ga sharing corners with diarsenate groups, and M+ cations (M = Ag hosted in the voids of the framework. Both structures are characterized by a staggered conformation of the As2O7 groups.

  7. 不同价态无机砷染毒大鼠肝脏砷形态分析%Distribution of arsenic metabloite in liver of rats treated with arsenite and arsenate

    Institute of Scientific and Technical Information of China (English)

    吴军; 杨晓燕; 姜平; 张杰; 郑玉建

    2011-01-01

    Objective To analyze the difference in distribution of arsenic metabolite in liver of the rats treated with arsenite and arsenate, and to explore metabolism and toxicity of arsenic. Methods Seventy-two Wistar rats were devided into 7 groups. After three months' treatment, the liver samples of the rats were collected and kept in deep freeze refrigerator. With high efficiency liquid chromatography and hydride genesis atomic fluorescence spectroscopy( HPLC-HGAFS ), the speciation and concentrations of arsenate and arsenite and their metabolic products in the liver were determined. Meanwhile, the recovery rate of monomethylarsonic acid(MMA) was determined to estimate the accuracy of the results. The arsenic accumulation was evaluated based on the content of total arsenic in liver and the differences in pathway and capability of methylation were estimated according to levels of primary methylated index(PMI) and secondary methylated index(SMI) of arsenic in the liver. Results There were significant differences in the levels of total arsenic between high,moderate,and low arsenite groups( 1 142. 9 ±50. 4,484. 6 ± 37.4,323. 3 ±20. 2 ng/g wet weight) and between high,moderate,and low arsenate groups (3 695. 2 ± 345.9,1 833.8 ± 229. 6,1 170. 5 ± 77.4 ng/g wet weight) ( P < 0. 05 for all). Except high dose group,the level of iAs3 + ( 118.4 ± 23.9,252. 3 ± 14. 3 ng/g wet weight) and dimethylarsinic acid(DMA) ( 353.2 ± 45.6,55. 2 ±10. 6 ng/g wet weight) in the liver of moderate and low arsenite group were lower than the level of iAs3+ (558.7 ±39. 0,759. 5 ± 67.6 ng/g wet weight)and DMA ( 1269. 7 ± 219. 9,402. 1 ± 60. 5 ng/g wet weight)in moderate and low arsenate groups(P <0. 05). The level of MMA( 13.0 ±2. 88,15.8 ±3. 14 ng/g wet weight)in the liver of moderate and low arsenite group were higher than the level of MMA(5. 35 ± 1.18,8. 87 ± 1.66 ng/g wet weight) of the moderate and low arsenate groups( P <0. 05 ). The level of PMI and SMI of different

  8. Microbial Reduction of Al-Substituted Fe(III) (Hydr)oxides: Redefining the Reducing Capacity of Fe Phases in Natural Soils

    Science.gov (United States)

    Ekstrom, E. B.; Hansel, C. M.

    2008-12-01

    Aluminum, one of the most abundant elements in soils and sediments, is also commonly found co- precipitated with Fe in natural Fe (III) (hydr)oxides. Although significant progress has been made elucidating the rates and solid-phase products of Fe(III) reduction by dissimilatory iron-reducing bacteria (DIRB) grown on pure, synthetic iron (hydr)oxides, relatively little is known about the impact of Al co-precipitation within Fe(III) (hydr)oxides on growth and bacterial Fe reduction by DIRB. Two previous studies investigating bacterial Fe reduction of Al-containing goethite minerals found contrasting results. To better understand the role of Al-substitution in controlling the rate, extent, and products of bacterial Fe(III) reduction, we have performed Fe(III) reduction experiments with the model DIRB, Shewanella putrefaciens CN32 grown on synthetic ferrihydrite, lepidocrocite, and goethite containing between 0 and 13 mole % Al. These experiments reveal that the impact of Al varies among Fe(III) (hydr)oxide minerals. Increasing Al-substitution in ferrihydrite results in a decrease of bacterial growth and Fe(III) reduction, while increasing Al content within lepidocrocite causes increased bacterial growth and Fe(III) reduction. For goethite, no change in Fe(III) reduction or growth is observed when growth on goethite containing increasing Al-substitution. Given the prevalence of Al-substitution in natural Fe(III) (hydr)oxides, our results bring into question the conventional assumptions about Fe(III) oxide bioavailability and suggest a more prominent role of natural lepidocrocite phases in impacting DIRB activity in soils and sediments.

  9. The fate of N-15-nitrate in healthy and declining Phragmites australis stands

    NARCIS (Netherlands)

    Nijburg, J.W.; Laanbroek, H.J.

    1997-01-01

    The dissimilatory nitrate-reducing processes, denitrification, and dissimilatory nitrate-reduction to ammonium were studied in freshwater lake sediments within healthy and degrading Phragmites australis (reed) stands. The samples from the healthy vegetation site contained roots and rhizomes. Cores

  10. The fate of 15N-nitrate in healthy and declining Phragmites australis stands

    NARCIS (Netherlands)

    Nijburg, J.W.; Laanbroek, H.J.

    1997-01-01

    The dissimilatory nitrate-reducing processes, denitrification, and dissimilatory nitrate-reduction to ammonium were studied in freshwater lake sediments within healthy and degrading Phragmites australis (reed) stands. The samples from the healthy vegetation site contained roots and rhizomes. Cores

  11. Lymphedema Risk Reduction Practices

    Science.gov (United States)

    ... LSAP Perspective (9) 2017 NLN International Conference Position Paper: Lymphedema Risk Reduction Practices Category: Position Papers Tags: ... and water, pat dry, then apply a topical antibacterial. d. Wear non-constricting protective gear over the ...

  12. Reduction Redux of Adinkras

    CERN Document Server

    Gates,, S James; Stiffler, Kory

    2013-01-01

    We show performing general ``0-brane reduction'' along an arbitrary fixed direction in spacetime and applied to the starting point of minimal, off-shell 4D, $\\cal N$ $=$ 1 irreducible supermultiplets, yields adinkras whose adjacency matrices are among some of the special cases proposed by Kuznetsova, Rojas, and Toppan. However, these more general reductions also can lead to `Garden Algebra' structures beyond those described in their work. It is also shown that for light-like directions, reduction to the 0-brane breaks the equality in the number of fermions and bosons for dynamical theories. This implies that light-like reductions should be done instead to the space of 1-branes or equivalently to the worldsheet.

  13. Breast Reduction Surgery

    Science.gov (United States)

    ... breastfeeding: A systematic review. Journal of Plastic, Reconstructive & Aesthetic Surgery. 2010;63:1688. Kerrigan CL, et al. Evidence-based medicine: Reduction mammoplasty. Plastic and Reconstructive Surgery. 2013;132: ...

  14. Work Truck Idling Reduction

    Energy Technology Data Exchange (ETDEWEB)

    None

    2017-03-01

    Hybrid utility trucks, with auxiliary power sources for on-board equipment, significantly reduce unnecessary idling resulting in fuel costs savings, less engine wear, and reduction in noise and emissions.

  15. New Reductive Desulfurization Technology

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    @@ The project for the research of the pulse plasma reductive desulfurization technology undertaken by Huazhong University of Science and Technology recently passed the research achievement appraisal in Wuhan, Hubei province.

  16. Sedimentary nitrate reduction and its effect on the N-isotopic composition of oceanic nitrate

    Science.gov (United States)

    Lehmann, M. F.; Sigman, D. M.; McCorkle, D. C.

    2005-12-01

    A prerequisite for assessing denitrification fluxes in a specific environment using water column nitrate N isotope ratios is the knowledge of the expressed N isotope effects of water column and/or benthic denitrification in this environment. Here, we aim at assessing the effects of benthic nitrogen cycling on the N isotopic composition of the oceanic nitrate pool in deep-sea sediments, which are believed to harbour a large portion of the global benthic denitrification. We report 15N/14N ratios of pore water nitrate in pelagic sediments from the deep Bering Sea, where benthic nitrate reduction has previously been identified as a significant sink of fixed nitrogen. Porewater profiles from multicores indicate strong 15N enrichment in porewater nitrate at all stations, as one goes deeper in the sediments and nitrate concentrations decrease (δ15N generally reached 25-35‰). Our data are consistent with variable biological isotope effect (ɛ) for dissimilatory nitrate reduction ranging between 13 to 30 ‰. A one-dimensional diffusion-reaction model including organic matter degradation, nitrification, and denitrification indicates that, although denitrification leads to a pore water nitrate pool that is enriched in 15N, N isotope fractionation is poorly expressed at the scale of sediment-water nitrate exchange, independent of whether sediments are a net sink or a net source of nitrate. The apparent nitrate isotope effect of sedimentary denitrification on nitrate in overlying waters is generally below 2‰, as a result of diffusive transport limitation into, and within, the sediments and/or the production of light nitrate during nitrification. Thus, our data suggest that the low expressed isotope effect of benthic denitrification observed previously in reactive shelf sediments also applies to deep-sea sediments. However, where ammonium fluxes out of the sediments, it is enriched in 15-N, and may ultimately lead to an N-isotopic enrichment of the water-column nitrate

  17. High frequency of phylogenetically diverse reductive dehalogenase-homologous genes in deep subseafloor sedimentary metagenomes

    Science.gov (United States)

    Kawai, Mikihiko; Futagami, Taiki; Toyoda, Atsushi; Takaki, Yoshihiro; Nishi, Shinro; Hori, Sayaka; Arai, Wataru; Tsubouchi, Taishi; Morono, Yuki; Uchiyama, Ikuo; Ito, Takehiko; Fujiyama, Asao; Inagaki, Fumio; Takami, Hideto

    2014-01-01

    Marine subsurface sediments on the Pacific margin harbor diverse microbial communities even at depths of several hundreds meters below the seafloor (mbsf) or more. Previous PCR-based molecular analysis showed the presence of diverse reductive dehalogenase gene (rdhA) homologs in marine subsurface sediment, suggesting that anaerobic respiration of organohalides is one of the possible energy-yielding pathways in the organic-rich sedimentary habitat. However, primer-independent molecular characterization of rdhA has remained to be demonstrated. Here, we studied the diversity and frequency of rdhA homologs by metagenomic analysis of five different depth horizons (0.8, 5.1, 18.6, 48.5, and 107.0 mbsf) at Site C9001 off the Shimokita Peninsula of Japan. From all metagenomic pools, remarkably diverse rdhA-homologous sequences, some of which are affiliated with novel clusters, were observed with high frequency. As a comparison, we also examined frequency of dissimilatory sulfite reductase genes (dsrAB), key functional genes for microbial sulfate reduction. The dsrAB were also widely observed in the metagenomic pools whereas the frequency of dsrAB genes was generally smaller than that of rdhA-homologous genes. The phylogenetic composition of rdhA-homologous genes was similar among the five depth horizons. Our metagenomic data revealed that subseafloor rdhA homologs are more diverse than previously identified from PCR-based molecular studies. Spatial distribution of similar rdhA homologs across wide depositional ages indicates that the heterotrophic metabolic processes mediated by the genes can be ecologically important, functioning in the organic-rich subseafloor sedimentary biosphere. PMID:24624126

  18. Antiquity and evolutionary status of bacterial sulfate reduction: sulfur isotope evidence.

    Science.gov (United States)

    Schidlowski, M

    1979-09-01

    The presently available sedimentary sulfur isotope record for the Precambrian seems to allow the following conclusions: (1) In the Early Archaean, sedimentary delta 34S patterns attributable to bacteriogenic sulfate reduction are generally absent. In particular, the delta 34S spread observed in the Isua banded iron formation (3.7 x 10(9) yr) is extremely narrow and coincides completely with the respective spreads yielded by contemporaneous rocks of assumed mantle derivation. Incipient minor differentiation of the isotope pattersn notably of Archaean sulfates may be accounted for by photosynthetic sulfur bacteria rather than by sulfate reducers. (2) Isotopic evidence of dissimilatory sulfate reduction is first observed in the upper Archaean of the Aldan Shield, Siberia (approximately 3.0 x 10(9) yr) and in the Michipicoten and Woman River banded iron formations of Canada (2.75 x 10(9) yr). This narrows down the possible time of appearance of sulfate respirers to the interval 2.8--3.1 x 10(9) yr. (3) Various lines of evidence indicate that photosynthesis is older than sulfate respiration, the SO4(2-) Utilized by the first sulfate reducers deriving most probably from oxidation of reduced sulfur compounds by photosynthetic sulfur bacteria. Sulfate respiration must, in turn, have antedated oxygen respiration as O2-respiring multicellular eucaryotes appear late in the Precambrian. (4) With the bulk of sulfate in the Archaean oceans probably produced by photosynthetic sulfur bacteria, the accumulation of SO4(2-) in the ancient seas must have preceded the buildup of appreciable steady state levels of free oxygen. Hence, the occurrence of sulfate evaporites in Archaean sediments does not necessarily provide testimony of oxidation weathering on the ancient continents and, consequently, of the existence of an atmospheric oxygen reservoir.

  19. Nitrate reduction mechanisms and rates in an unconfined eogenetic karst aquifer in two sites with different redox potential

    Science.gov (United States)

    Henson, Wesley; Huang, Laibin; Graham, Wendy D.; Ogram, Andrew

    2017-01-01

    This study integrates push-pull tracer tests (PPTT) with microbial characterization of extracted water via quantitative polymerase chain reaction (qPCR) and reverse transcriptase qPCR (RT-qPCR) of selected functional N transformation genes to quantify nitrate reduction mechanisms and rates in sites with different redox potential in a karst aquifer. PPTT treatments with nitrate (AN) and nitrate-fumarate (ANC) were executed in two wells representing anoxic and oxic geochemical end-members. Oxic aquifer zero-order nitrate loss rates (mmol L−1 h−1) were similar for AN and ANC treatment, ranging from 0.03 ± 0.01 to 0.05 ± 0.01. Anoxic aquifer zero-order nitrate loss rates ranged from 0.03 ± 0.02 (AN) to 0.13 ± 0.02 (ANC). Microbial characterization indicates mechanisms influencing these rates were dissimilatory nitrate reduction to ammonium (DNRA) at the anoxic site with AN treatment, assimilatory reduction of nitrate to ammonium (ANRA) with ANC treatment in the water column at both sites, and additional documented nitrate reduction that occurred in unsampled biofilms. With carbon treatment, total numbers of microbes (16S rRNA genes) significantly increased (fourteenfold to thirtyfold), supporting stimulated growth with resulting ANRA. Decreased DNRA gene concentrations (nrfA DNA) and increased DNRA activity ratio (nrfA-cDNA/DNA) supported the assertion that DNRA occurred in the anoxic zone with AN and ANC treatment. Furthermore, decreased DNRA gene copy numbers at the anoxic site with ANC treatment suggests that DNRA microbes in the anoxic site are chemolithoautotrophic. Increased RT-qPCR denitrification gene expression (nirK and nirS) was not observed in water samples, supporting that any observed NO3-N loss due to denitrification may be occurring in unsampled microbial biofilms.

  20. Nitrate reduction mechanisms and rates in an unconfined eogenetic karst aquifer in two sites with different redox potential

    Science.gov (United States)

    Henson, W. R.; Huang, L.; Graham, W. D.; Ogram, A.

    2017-05-01

    This study integrates push-pull tracer tests (PPTT) with microbial characterization of extracted water via quantitative polymerase chain reaction (qPCR) and reverse transcriptase qPCR (RT-qPCR) of selected functional N transformation genes to quantify nitrate reduction mechanisms and rates in sites with different redox potential in a karst aquifer. PPTT treatments with nitrate (AN) and nitrate-fumarate (ANC) were executed in two wells representing anoxic and oxic geochemical end-members. Oxic aquifer zero-order nitrate loss rates (mmol L-1 h-1) were similar for AN and ANC treatment, ranging from 0.03 ± 0.01 to 0.05 ± 0.01. Anoxic aquifer zero-order nitrate loss rates ranged from 0.03 ± 0.02 (AN) to 0.13 ± 0.02 (ANC). Microbial characterization indicates mechanisms influencing these rates were dissimilatory nitrate reduction to ammonium (DNRA) at the anoxic site with AN treatment, assimilatory reduction of nitrate to ammonium (ANRA) with ANC treatment in the water column at both sites, and additional documented nitrate reduction that occurred in unsampled biofilms. With carbon treatment, total numbers of microbes (16S rRNA genes) significantly increased (fourteenfold to thirtyfold), supporting stimulated growth with resulting ANRA. Decreased DNRA gene concentrations (nrfA DNA) and increased DNRA activity ratio (nrfA-cDNA/DNA) supported the assertion that DNRA occurred in the anoxic zone with AN and ANC treatment. Furthermore, decreased DNRA gene copy numbers at the anoxic site with ANC treatment suggests that DNRA microbes in the anoxic site are chemolithoautotrophic. Increased RT-qPCR denitrification gene expression (nirK and nirS) was not observed in water samples, supporting that any observed NO3-N loss due to denitrification may be occurring in unsampled microbial biofilms.

  1. 人工合成铁、铝矿对As(V)吸附的研究%Study on arsenate adsorption by synthetic iron and aluminum oxides/hydroxides

    Institute of Scientific and Technical Information of China (English)

    吴萍萍; 曾希柏

    2011-01-01

    Batch experiments were used to investigate arsenate adsorption by synthetic iron and aluminum oxides/hydroxides.The effects of adsorption time and pH on the adsorption behavior were also studied.The results showed that, As(V)adsorption by four iron and aluminum oxides/hydroxides increased with initial As(V) concentrations (0.1~100 mg/L), in which ferrihydrite showed a rising adsorption trend in the whole concentration range, with the adsorption amount of 22.56 mg/g at the initial As(V) of 100 mg/L.While the rapid increase in lower initial concentration and slow change in higher initial concentrations for the adsorption capacities of goethite, gibbsite, and hematite were obtained.When the initial As(V)reached 100mg/L, the least adsorption capacity of 4.75mg/g was received for hematite.Furthermore, the Freundlich equation fitted the data better than the Langmuir equation.The adsorption capacity of ferrihydrite is the highest, followed by goethite and gibbsite, and hematite shows lower adsorption capacity.With the increase of adsorption time, As(V) adsorption amount of four synthetic iron and aluminum oxides/hydroxides increased gradually, especially for ferrihydrite, reaching 96.3% of adsorption equilibrium in 10 minutes.The adsorption amount of goethite and gibbsite reached 97.4% and 97.2% of the equilibrium at 48h, respectively, while hematite required 96 hours to reach the equilibrium.Except ferrihydrite, four equations fitted the kinetic data better, especially the two-constant equation.The effect of pH on As(V) adsorption was associated to As(V) initial concentrations.In lower initial concentrations, adsorption of four synthetic iron and aluminum oxides/hydroxides decreased only under extremely alkaline conditions (pH>10), and when the initial concentrations were higher, adsorption amount dropped sharply with pH increasing.%采用批实验方法研究了人工合成铁、铝矿物对As(V)的吸附,考察吸附时间及溶液pH值对As(V)吸附的影

  2. Reduction of adsorbed As(V) on nano-TiO2 by sulfate-reducing bacteria.

    Science.gov (United States)

    Luo, Ting; Ye, Li; Ding, Cheng; Yan, Jinlong; Jing, Chuanyong

    2017-11-15

    Reduction of surface-bound arsenate [As(V)] and subsequent release into the aqueous phase contribute to elevated As in groundwater. However, this natural process is not fully understood, especially in the presence of sulfate-reducing bacteria (SRB). Gaining mechanistic insights into solid-As(V)-SRB interactions motivated our molecular level study on the fate of nano-TiO2 bound As(V) in the presence of Desulfovibrio vulgaris DP4, a strain of SRB, using incubation and in situ ATR-FTIR experiments. The incubation results clearly revealed the reduction of As(V), either adsorbed on nano-TiO2 or dissolved, in the presence of SRB. In contrast, this As(V) reduction was not observed in abiotic control experiments where sulfide was used as the reductant. Moreover, the reduction was faster for surface-bound As(V) than for dissolved As(V), as evidenced by the appearance of As(III) at 45h and 75h, respectively. ATR-FTIR results provided direct evidence that the surface-bound As(V) was reduced to As(III) on TiO2 surfaces in the presence of SRB. In addition, the As(V) desorption from nano-TiO2 was promoted by SRB relative to abiotic sulfide, due to the competition between As(V) and bacterial phosphate groups for TiO2 surface sites. This competition was corroborated by the ATR-FTIR analysis, which showed inner-sphere surface complex formation by bacterial phosphate groups on TiO2 surfaces. The results from this study highlight the importance of indirect bacteria-mediated As(V) reduction and release in geochemical systems. Copyright © 2017 Elsevier B.V. All rights reserved.

  3. Reduction zero-knowledge

    Institute of Scientific and Technical Information of China (English)

    ZHAO Yunlei; DENG Xiaotie; LEE C. H.; ZHU Hong

    2004-01-01

    The nature of zero-knowledge is re-examined and the evidence for the following belief is shown:the classic simulation based definitions of zero-knowledge(simulation zero-knowledge)may be somewhat too strong to include some "nice" protocols in which the malicious verifier seems to learn nothing but we do not know how to construct a zero-knowledge simulator for it.To overcome this problem a new relaxation of zero-knowledge,reduction zero-knowledge,is introduced.It is shown that reduction zero-knowledge just lies between simulation zero-knowledge and witness indistinguishability.Under the assumption of existence of one-way permutations a 4-round public-coin reduction zero-knowledge proof system for NP is presented and in practice this protocol works in 3 rounds since the first verifier's message can be fixed once and for all.

  4. The cyclic reduction algorithm

    Science.gov (United States)

    Bini, Dario; Meini, Beatrice

    2009-05-01

    Cyclic reduction is an algorithm invented by G.H. Golub and R. W. Hockney in the mid 1960s for solving linear systems related to the finite differences discretization of the Poisson equation over a rectangle. Among the algorithms of Gene Golub, it is one of the most versatile and powerful ever created. Recently, it has been applied to solve different problems from different applicative areas. In this paper we survey the main features of cyclic reduction, relate it to properties of analytic functions, recall its extension to solving more general finite and infinite linear systems, and different kinds of nonlinear matrix equations, including algebraic Riccati equations, with applications to Markov chains, queueing models and transport theory. Some new results concerning the convergence properties of cyclic reduction and its applicability are proved under very weak assumptions. New formulae for overcoming breakdown are provided.

  5. REDUCTIONS WITHOUT REGRET: SUMMARY

    Energy Technology Data Exchange (ETDEWEB)

    Swegle, J.; Tincher, D.

    2013-09-16

    This paper briefly summarizes the series in which we consider the possibilities for losing, or compromising, key capabilities of the U.S. nuclear force in the face of modernization and reductions. The first of the three papers takes an historical perspective, considering capabilities that were eliminated in past force reductions. The second paper is our attempt to define the needed capabilities looking forward in the context of the current framework for force modernization and the current picture of the evolving challenges of deterrence and assurance. The third paper then provides an example for each of our undesirable outcomes: the creation of roach motels, box canyons, and wrong turns.

  6. Time, Chance, and Reduction

    Science.gov (United States)

    Ernst, Gerhard; Hüttemann, Andreas

    2010-01-01

    List of contributors; 1. Introduction Gerhard Ernst and Andreas Hütteman; Part I. The Arrows of Time: 2. Does a low-entropy constraint prevent us from influencing the past? Mathias Frisch; 3. The part hypothesis meets gravity Craig Callender; 4. Quantum gravity and the arrow of time Claus Kiefer; Part II. Probability and Chance: 5. The natural-range conception of probability Jacob Rosenthal; 6. Probability in Boltzmannian statistical mechanics Roman Frigg; 7. Humean mechanics versus a metaphysics of powers Michael Esfeld; Part III. Reduction: 8. The crystallisation of Clausius's phenomenological thermodynamics C. Ulises Moulines; 9. Reduction and renormalization Robert W. Batterman; 10. Irreversibility in stochastic dynamics Jos Uffink; Index.

  7. Bronchoscopic lung volume reduction

    Directory of Open Access Journals (Sweden)

    M. I. Polkey

    2006-12-01

    Full Text Available Surgical lung volume reduction can improve exercise performance and forced expiratory volume in one second in patients with emphysema. However, the procedure is associated with a 5% mortality rate and a nonresponse rate of 25%. Accordingly, interest has focused on alternative ways of reducing lung volume. Two principle approaches are used: collapse of the diseased area using blockers placed endobronchially and the creation of extrapulmonary pathways. Preliminary data from the former approach suggest that it can be successful and that the magnitude of success is related to reduction in dynamic hyperinflation.

  8. Metaproteomics Identifies the Protein Machinery Involved in Metal and Radionuclide Reduction in Subsurface Microbiomes and Elucidates Mechanisms and U(VI) Reduction Immobilization

    Energy Technology Data Exchange (ETDEWEB)

    Pfiffner, Susan M. [Univ. of Tennessee, Knoxville, TN (United States); Löffler, Frank [Univ. of Tennessee, Knoxville, TN (United States); Ritalahti, Kirsti [Univ. of Tennessee, Knoxville, TN (United States); Sayler, Gary [Univ. of Tennessee, Knoxville, TN (United States); Layton, Alice [Univ. of Tennessee, Knoxville, TN (United States); Hettich, Robert [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)

    2015-08-31

    analyses, and gene expression studies to support the metaproteomics characterizations. Growth experiments of target microorganisms (Anaeromyxobacter, Shewanella, Geobacter) revealed tremendous respiratory versatility, as evidenced by the ability to utilize a range of electron donors (e.g. acetate, hydrogen, pyruvate, lactate, succinate, formate) and electron acceptors (e.g. nitrate, fumarate, halogenated phenols, ferric iron, nitrous oxide, etc.). In particular, the dissimilatory metabolic reduction of metals, including radionuclides, by target microorganisms spurred interest for in situ bioremediation of contaminated soils and sediments. Distinct c-type cytochrome expression patterns were observed in target microorganisms grown with the different electron acceptors. For each target microorganism, the core proteome covered almost all metabolic pathways represented by their corresponding pan-proteomes. Unique proteins were detected for each target microorganism, and their expression and possible functionalities were linked to specific growth conditions through proteomics measurements. Optimization of the proteomic tools included in-depth comprehensive metagenomic and metaproteomic analyses on a limited number of samples. The optimized metaproteomic analyses were then applied to Oak Ridge IFRC field samples from the slow-release substrate biostimulation. Metaproteomic analysis and pathway mapping results demonstrated the distinct effects of metal and non-metal growth conditions on the proteome expression. With these metaproteomic tools, we identified which previously hypothetical metabolic pathways were active during the analyzed time points of the slow release substrate biostimulation. Thus, we demonstrated the utility of these tools for site assessment, efficient implementation of bioremediation and long-term monitoring. This research of detailed protein analysis linked with metal reduction activity did (1) show that c-type cytochrome isoforms, previously associated with

  9. Zinc and Arsenic Immobilization and Magnetite Formation Upon Maghemite Reduction by Shewanella putrefaciens ATCC 8071

    Science.gov (United States)

    Cismasu, C.; Ona-Nguema, G.; Bonnin, D.; Menguy, N.; Brown, G. E.

    2007-12-01

    Dissimilatory reduction of ferric iron oxides is recognized as an important component of the iron biogeochemical cycle, causing the dissolution of iron oxide minerals and the possible formation of Fe(II)-bearing minerals such as magnetite, green rusts, siderite, etc. These mineralogical transformations affect the mobility of surface- associated toxic metal(loid)s, which may be released into solution, adsorbed, or incorporated into newly formed minerals. Maghemite (γ-Fe2O3) is an iron oxide mineral that is found in certain tropical soils and as isolated deposits in more temperate regions. In these settings, maghemite may play an important role in the biogeochemical cycling of iron and of surface-associated trace metal(loids). However, the reduction of maghemite by iron-respiring bacteria, the impact of reductive dissolution on the release of associated contaminants, and the nature of biogenic Fe(II)-containing reaction products are not well documented. In the present study, we incubated samples of pure maghemite and As(V)- and Zn-adsorbed maghemite with an iron reducing bacterium, Shewanella putrefaciens strain ATCC 8071, in a batch system under anoxic conditions. As a result of Fe(III) bioreduction, all mineral suspensions turned from brown to black during the first hour of incubation, indicating the onset of magnetite formation. The presence of this mineral was confirmed by transmission Mössbauer spectroscopy at room temperature, which showed the formation of an almost stoichiometric magnetite. High-resolution transmission electron microscopy images indicate that the parent maghemite and the biogenic magnetite particles are octahedral in shape and of similar size (5 to 20 nm). The presence of 50 mg/L adsorbed Zn(II) did not affect the initial rate of iron reduction with respect to the Zn-free maghemite sample (0.62 mM Fe(II)/h and 0.66 mM Fe(II)/h, respectively). However, adsorption of 50 and 100 mg/L As(V) on maghemite decreased the initial iron reduction rate

  10. Dimensionality Reduction Mappings

    NARCIS (Netherlands)

    Bunte, Kerstin; Biehl, Michael; Hammer, Barbara

    2011-01-01

    A wealth of powerful dimensionality reduction methods has been established which can be used for data visualization and preprocessing. These are accompanied by formal evaluation schemes, which allow a quantitative evaluation along general principles and which even lead to further visualization schem

  11. Structure and reactivity of As(III)- and As(V)-rich schwertmannites and amorphous ferric arsenate sulfate from the Carnoulès acid mine drainage, France: Comparison with biotic and abiotic model compounds and implications for As remediation

    Science.gov (United States)

    Maillot, Fabien; Morin, Guillaume; Juillot, Farid; Bruneel, Odile; Casiot, Corinne; Ona-Nguema, Georges; Wang, Yuheng; Lebrun, Sophie; Aubry, Emmanuel; Vlaic, Gilberto; Brown, Gordon E.

    2013-03-01

    Poorly ordered nanocrystalline hydroxysulfate minerals of microbial origin, such as schwertmannite, Fe8O8(OH)6SO4, are important arsenic scavengers in sulfate-rich acid mine drainage (AMD) environments. However, despite the fact that As(III) and As(V) have been shown to sorb on schwertmannite, little is known about the actual mechanism of arsenic scavenging processes after microbial Fe(II) oxidation in AMD environments. The major focus of the present study is to determine the molecular-level structure of poorly ordered As(III) and As(V) bearing Fe oxyhydroxysulfate minerals from the Carnoulès AMD, France, which exhibits exceptional As(III) concentrations. Powder X-ray diffraction (XRD) and extended X-ray absorption fine structure (EXAFS) spectroscopy were used to compare field samples with a large set of synthetic analogs prepared via biotic or abiotic pathways, with As/Fe ratios typical of minerals and mineraloids ranging from nanocrystalline schwertmannite to amorphous hydroxysulfate compounds. Our results yield further evidence for the poisoning effect of As(V) in limiting the nucleation of schwertmannite. For initial dissolved As(V)/Fe(III) molar ratios ⩾0.2, amorphous Fe(III)-As(V) hydroxysulfate forms, with a local structure consistent with that of amorphous ferric arsenate. EXAFS data for this amorphous material are consistent with corner-sharing FeO6 octahedra to which AsO4 tetrahedra attach via double-corner 2C linkages. For As(V)/Fe(III) molar ratios lower than 0.2, As(V) binds to schwertmannite via 2C surface complexes. In contrast with the As(V)-containing samples, As(III) has a lower affinity for schwertmannite following its nucleation, as this mineral phase persists up to an initial As(III)/Fe(III) molar ratio of 0.6. EXAFS data indicate that during the precipitation process, As(III) forms dominantly 2C surface complexes on schwertmannite surfaces, likely on the sides of double-chains of Fe(III)(O,OH)6 octahedra, with a smaller proportion of edge

  12. Metaproteomics Identifies the Protein Machinery Involved in Metal and Radionuclide Reduction in Subsurface Microbiomes and Elucidates Mechanisms and U(VI) Reduction Immobilization

    Energy Technology Data Exchange (ETDEWEB)

    Pfiffner, Susan M. [Univ. of Tennessee, Knoxville, TN (United States); Löffler, Frank [Univ. of Tennessee, Knoxville, TN (United States); Ritalahti, Kirsti [Univ. of Tennessee, Knoxville, TN (United States); Sayler, Gary [Univ. of Tennessee, Knoxville, TN (United States); Layton, Alice [Univ. of Tennessee, Knoxville, TN (United States); Hettich, Robert [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)

    2015-08-31

    analyses, and gene expression studies to support the metaproteomics characterizations. Growth experiments of target microorganisms (Anaeromyxobacter, Shewanella, Geobacter) revealed tremendous respiratory versatility, as evidenced by the ability to utilize a range of electron donors (e.g. acetate, hydrogen, pyruvate, lactate, succinate, formate) and electron acceptors (e.g. nitrate, fumarate, halogenated phenols, ferric iron, nitrous oxide, etc.). In particular, the dissimilatory metabolic reduction of metals, including radionuclides, by target microorganisms spurred interest for in situ bioremediation of contaminated soils and sediments. Distinct c-type cytochrome expression patterns were observed in target microorganisms grown with the different electron acceptors. For each target microorganism, the core proteome covered almost all metabolic pathways represented by their corresponding pan-proteomes. Unique proteins were detected for each target microorganism, and their expression and possible functionalities were linked to specific growth conditions through proteomics measurements. Optimization of the proteomic tools included in-depth comprehensive metagenomic and metaproteomic analyses on a limited number of samples. The optimized metaproteomic analyses were then applied to Oak Ridge IFRC field samples from the slow-release substrate biostimulation. Metaproteomic analysis and pathway mapping results demonstrated the distinct effects of metal and non-metal growth conditions on the proteome expression. With these metaproteomic tools, we identified which previously hypothetical metabolic pathways were active during the analyzed time points of the slow release substrate biostimulation. Thus, we demonstrated the utility of these tools for site assessment, efficient implementation of bioremediation and long-term monitoring. This research of detailed protein analysis linked with metal reduction activity did (1) show that c-type cytochrome isoforms, previously associated with

  13. Reduction Kinetics of Manganese Dioxide by Geobacter Sulfurreducens and Associated Biofilm Morphology in a Flow-Through Reactor

    Science.gov (United States)

    Berns, E.; Werth, C. J.; Valocchi, A. J.; Sanford, R. A.

    2015-12-01

    Biogeochemical interactions have been investigated extensively to characterize natural nutrient cycling and predict contaminant transport in surface and groundwater. Dissimilatory metal reducing bacteria, many of which form biofilms, play an important role in reducing a variety of metals in these systems. It has been shown that biofilm morphology is impacted by flow conditions, but there has been little work that explores how reduction kinetics change as a result of these different morphologies. Different flow rates may affect physical properties of the biofilm that influence the rate of substrate reduction. We introduce an approach to calculate changes in Monod kinetic parameters while simultaneously evaluating biofilm morphologies under different flow rates. A vertical, cylindrical flow cell with removable glass slide sections coated in manganese dioxide (electron acceptor) was used to grow a biofilm of Geobacter sulfurreducens with acetate as the electron donor under both high (50 mL/hr) and low (5 mL/h) flow rates. The removable sections allowed for visualization of the biofilm at different time points with a confocal microscope, and quantification of the biomass on the surface using a combination of a protein assay and image analysis. Data collected from the experiments was used to determine yield and specific growth rate at the different flow rates, and a simple numerical model was used to estimate the half saturation constant of manganese dioxide at both flow rates. A smaller half saturation constant was estimated at the higher flow rate, indicating that the biofilm was more efficient in the high flow system, but a strong correlation between morphology and the faster reduction rate was not observed. Monod kinetic parameters are important for the development of accurate nutrient cycling and contaminant transport models in natural environments, and understanding how they are impacted by flow will be important for the development of new, improved models.

  14. Involvement and specificity of Shewanella oneidensis outer membrane cytochromes in the reduction of soluble and solid-phase terminal electron acceptors.

    Science.gov (United States)

    Bücking, Clemens; Popp, Felix; Kerzenmacher, Sven; Gescher, Johannes

    2010-05-01

    The formation of outer membrane (OM) cytochromes seems to be a key step in the evolution of dissimilatory iron-reducing bacteria. They are believed to be the endpoints of an extended respiratory chain to the surface of the cell that establishes the connection to insoluble electron acceptors such as iron or manganese oxides. The gammaproteobacterium Shewanella oneidensis MR-1 contains the genetic information for five putative OM cytochromes. In this study, the role and specificity of these proteins were investigated. All experiments were conducted using a markerless deletion mutant in all five OM cytochromes that was complemented via the expression of single, plasmid-encoded genes. MtrC and MtrF were shown to be potent reductases of chelated ferric iron, birnessite, and a carbon anode in a microbial fuel cell. OmcA-producing cells were unable to catalyze iron and electrode reduction, although the protein was correctly produced and oriented. However, OmcA production resulted in a higher birnessite reduction rate compared with the mutant. The presence of the decaheme cytochrome SO_2931 as well as the diheme cytochrome SO_1659 did not rescue the phenotype of the deletion mutant.

  15. Elucidating the Molecular Basis and Regulation of Chromium(VI) Reduction by Shewanella oneidensis MR-1 and Resistance to Metal Toxicity Using Integrated Biochemical, Genomic and Proteomic Approaches

    Energy Technology Data Exchange (ETDEWEB)

    Dorothea K. Thompson; Robert Hettich

    2007-02-06

    Shewanella oneidensis MR-1 is a model environmental organism that possesses diverse respiratory capacities, including the ability to reduce soluble Cr(VI) to sparingly soluble, less toxic Cr(III). Chromate is a serious anthropogenic pollutant found in subsurface sediment and groundwater environments due to its widespread use in defense and industrial applications. Effective bioremediation of chromate-contaminated sites requires knowledge of the molecular mechanisms and regulation of heavy metal resistance and biotransformation by dissimilatory metal-reducing bacteria. Towards this goal, our ERSP-funded work was focused on the identification and functional analysis of genes/proteins comprising the response pathways for chromate detoxification and/or reduction. Our work utilized temporal transcriptomic profiling and whole-cell proteomic analyses to characterize the dynamic molecular response of MR-1 to an acute chromate shock (up to 90 min) as well as to a 24-h, low-dose exposure. In addition, we have examined the transcriptome of MR-1 cells actively engaged in chromate reduction. These studies implicated the involvement of a functionally undefined DNA-binding response regulator (SO2426) and a putative azoreductase (SO3585) in the chromate stress response of MR-1.

  16. Fully Awake Breast Reduction.

    Science.gov (United States)

    Filson, Simon A; Yarhi, Danielle; Ramon, Yitzhak

    2016-11-01

    The authors present 25 cases and an in-depth 4-minute video of fully awake aesthetic breast reduction, which was made possible by thoracic epidural anesthesia. There are obvious and important advantages to this technique. Not only does this allow for intraoperative patient cooperation (i.e., patient self-positioning and opinion for comparison of breasts), meaning a shorter and more efficient intraoperative time, there also is a reduction in postoperative pain, complications, recovery, and discharge times. The authors have also enjoyed great success and no complications with this technique in over 150 awake abdominoplasty/total body lift patients. The authors feel that the elimination of the need for general anesthesia by thoracic epidural sensorial-only anesthesia is a highly effective and efficient technique, with very few disadvantages/complications, providing advantages to both patients and surgeons. Therapeutic, IV.

  17. Injury reduction at Fermilab

    Energy Technology Data Exchange (ETDEWEB)

    Griffing, Bill; /Fermilab

    2005-06-01

    In a recent DOE Program Review, Fermilab's director presented results of the laboratory's effort to reduce the injury rate over the last decade. The results, shown in the figure below, reveal a consistent and dramatic downward trend in OSHA recordable injuries at Fermilab. The High Energy Physics Program Office has asked Fermilab to report in detail on how the laboratory has achieved the reduction. In fact, the reduction in the injury rate reflects a change in safety culture at Fermilab, which has evolved slowly over this period, due to a series of events, both planned and unplanned. This paper attempts to describe those significant events and analyze how each of them has shaped the safety culture that, in turn, has reduced the rate of injury at Fermilab to its current value.

  18. Jet Engine Noise Reduction

    Science.gov (United States)

    2009-04-01

    Technology Solutions, Lockheed Martin Robert S. Carnes , M.D. NRAC Member, Battelle Memorial Institute MajGen Paul A. Fratarangelo, USMC (Ret) NRAC...Development, Acquisition) (VADM Architzel). The Naval Research Advisory Committee members (Bowes, Bowler, Carnes and Fratarangelo) have broad...Lockheed Martin ADP Boeing: Jet Engine Noise Reduction for Tactical Fighter Aircraft Mr. Tom Kaemming, K. Viswanathan, Ph . D. Tactical Jet Noise

  19. Post-Translational Modifications of Desulfovibrio vulgaris Hildenborough Sulfate Reduction Pathway Proteins

    Energy Technology Data Exchange (ETDEWEB)

    Gaucher, S.P.; Redding, A.M.; Mukhopadhyay, A.; Keasling, J.D.; Singh, A.K.

    2008-03-01

    Recent developments in shotgun proteomics have enabled high-throughput studies of a variety of microorganisms at a proteome level and provide experimental validation for predicted open reading frames in the corresponding genome. More importantly, advances in mass spectrometric data analysis now allow mining of large proteomics data sets for the presence of post-translational modifications(PTMs). Although PTMs are a critical aspectof cellular activity, such information eludes cell-wide studies conducted at the transcript level. Here, we analyze several mass spectrometric data sets acquired using two-dimensional liquid chromatography tandem mass spectrometry, 2D-LC/MS/MS, for the sulfate reducing bacterium, Desulfovibrio vulgaris Hildenborough. Our searches of the raw spectra led us to discover several post-translationally modified peptides in D. vulgaris. Of these, several peptides containing a lysine with a +42 Da modification were found reproducibly across all data sets. Both acetylation and trimethylation have the same nominal +42 Da mass, and are therefore candidates for this modification. Several spectra were identified having markers for trimethylation, while one is consistent with an acetylation. Surprisingly, these modified peptides predominantly mapped to proteins involved in sulfate respiration. Other highly expressed proteins in D. vulgaris, such as enzymes involved in electron transport and other central metabolic processes, did not contain this modification. Decoy database searches were used to control for random spectrum/sequence matches. Additional validation for these modifications was provided by alternate workflows, for example, two-dimensional gel electrophoresis followed by mass spectrometry analysis of the dissimilatory sulfite reductase gamma-subunit(DsrC) protein. MS data for DsrC in this alternate workflow also contained the +42 Da modification at the same loci. Furthermore, the DsrC homologue in another sulfate reducing bacterium

  20. Infrared and Raman spectroscopic characterization of the arsenate mineral ceruleite Cu2Al7(AsO4)4(OH)13· 11.5(H2O).

    Science.gov (United States)

    Frost, Ray L; Lópes, Andrés; Scholz, Ricardo; Xi, Yunfei

    2013-12-01

    The molecular structure of the arsenate mineral ceruleite has been assessed using a combination of Raman and infrared spectroscopy. The most intense band observed at 903 cm(-1) is assigned to the (AsO4)(3-) symmetric stretching vibrational mode. The infrared spectrum shows intense bands at 787, 827 and 886 cm(-1), ascribed to the triply degenerate ν3 antisymmetric stretching vibration. Raman bands observed at 373, 400, 417 and 430 cm(-1) are attributed to the ν2 vibrational mode. Three broad bands for ceruleite found at 3056, 3198 and 3384 cm(-1) are assigned to water OH stretching bands. By using a Libowitzky empirical equation, hydrogen bond distances of 2.65 and 2.75Å are calculated. Vibrational spectra enable the molecular structure of the ceruleite mineral to be determined and whilst similarities exist in the spectral patterns with the roselite mineral group, sufficient differences exist to be able to determine the identification of the minerals. Copyright © 2013 Elsevier B.V. All rights reserved.

  1. Nitrate Enhanced Microbial Cr(VI) Reduction-Final Report

    Energy Technology Data Exchange (ETDEWEB)

    John F. Stolz

    2011-06-15

    donors are possible. Although the version of the Phylochip used for monitoring the microbial community at the Hanford site did not include S. barnesii it did have probes for detecting other Sulfurospirillum species (e.g., S. multivorans, S. halorespirans). For D. desulfuricans, again, redox active proteins such as dissimilatory nitrite reductase and dissimilary sulfite reductase are effectively oxidized by Cr(VI) thus inhibiting their reductive potential. More physiological and biochemical data are needed before a possible strategy can be designed and assessed.

  2. An interesting biochar effect that suppressed dechlorination of pentachlorophenol while promoted iron/sulfate reduction and methanogenesis in flooded soil

    Science.gov (United States)

    He, Yan; Zhu, Min

    2017-04-01

    Biochar has received increasing attention for its many environmental impacts in recent years, but there is still a lack of comprehensive understanding of its effects on the fate of reducible organic pollutants and soil biogeochemical processes under anaerobic environments. In this study, anaerobic batch experiments were conducted to explore the effect of biochar on reductive transformation of PCP and other soil redox processes in anaerobic incubation environment. Results showed that biochar had little impact on the system Eh and pH, both of which decreased gradually to a stable value during the incubation. Dissimilatory iron reduction and sulfate reduction were significantly enhanced following biochar addition, with the promoting effect more prominent in the treatment with 1% (w/w) than that with 5% biochar added. In addition, biochar accelerated the formation of carbon dioxide and methane, but there was no difference in the final content of these two greenhouse gases at the end of incubation between biochar amended and control treatments. Unexpectedly, compared to biochar-free controls, the reductively dechlorinated degradation of PCP was inhibited following biochar addition, with the inhibition extent increased with the increase of biochar amount. These revealed an interesting biochar effect that suppressed the dechlorination of PCP, but promoted the iron/sulfate reduction and accelerated the methanogenesis. It might be simultaneously mediated by the functional microbial groups that responded sensitively to the addition of biochar and/or PCP, including the potential dechlorinators, the potential iron/sulfate reducers, and the typical methanogenic archaea. Specific function of biochar as electron shuttle was also likely involved in underpinning this interesting effect, since biochar would be capable of splitting the limited electrons from the inferior electron acceptors (in our case, the PCP) to the dominant more competitive ones (in our case, Fe(III) and SO42

  3. Reduction of turbomachinery noise

    Science.gov (United States)

    Waitz, Ian A. (Inventor); Brookfield, John M. (Inventor); Sell, Julian (Inventor); Hayden, Belva J. (Inventor); Ingard, K. Uno (Inventor)

    1999-01-01

    In the invention, propagating broad band and tonal acoustic components of noise characteristic of interaction of a turbomachine blade wake, produced by a turbomachine blade as the blade rotates, with a turbomachine component downstream of the rotating blade, are reduced. This is accomplished by injection of fluid into the blade wake through a port in the rotor blade. The mass flow rate of the fluid injected into the blade wake is selected to reduce the momentum deficit of the wake to correspondingly increase the time-mean velocity of the wake and decrease the turbulent velocity fluctuations of the wake. With this fluid injection, reduction of both propagating broad band and tonal acoustic components of noise produced by interaction of the blade wake with a turbomachine component downstream of the rotating blade is achieved. In a further noise reduction technique, boundary layer fluid is suctioned into the turbomachine blade through a suction port on the side of the blade that is characterized as the relatively low-pressure blade side. As with the fluid injection technique, the mass flow rate of the fluid suctioned into the blade is here selected to reduce the momentum deficit of the wake to correspondingly increase the time-mean velocity of the wake and decrease the turbulent velocity fluctuations of the wake; reduction of both propagating broad band and tonal acoustic components of noise produced by interaction of the blade wake with a turbomachine component downstream of the rotating blade is achieved with this suction technique. Blowing and suction techniques are also provided in the invention for reducing noise associated with the wake produced by fluid flow around a stationary blade upstream of a rotating turbomachine.

  4. Infinitary Combinatory Reduction Systems

    DEFF Research Database (Denmark)

    Ketema, Jeroen; Simonsen, Jakob Grue

    2011-01-01

    We define infinitary Combinatory Reduction Systems (iCRSs), thus providing the first notion of infinitary higher-order rewriting. The systems defined are sufficiently general that ordinary infinitary term rewriting and infinitary ¿-calculus are special cases. Furthermore,we generalise a number...... of knownresults fromfirst-order infinitary rewriting and infinitary ¿-calculus to iCRSs. In particular, for fully-extended, left-linear iCRSs we prove the well-known compression property, and for orthogonal iCRSs we prove that (1) if a set of redexes U has a complete development, then all complete developments...

  5. Oxygen Reduction on Platinum

    DEFF Research Database (Denmark)

    Nesselberger, Markus

    This thesis investigates the electro reduction of oxygen on platinum nanoparticles, which serve as catalyst in low temperature fuel cells. Kinetic studies on model catalysts as well as commercially used systems are presented in order to investigate the particle size effect, the particle proximity...... carbon (HSAC) supported Pt nanoparticle (Pt/C) catalysts (of various size between 1 and 5 nm). The difference in SA between the individual Pt/C catalysts (1 to 5 nm) is very small and within the error of the measurements. The factor four of loss in SA when comparing platinum bulk and Pt/C can largely...

  6. Reduction operators of Burgers equation.

    Science.gov (United States)

    Pocheketa, Oleksandr A; Popovych, Roman O

    2013-02-01

    The solution of the problem on reduction operators and nonclassical reductions of the Burgers equation is systematically treated and completed. A new proof of the theorem on the special "no-go" case of regular reduction operators is presented, and the representation of the coefficients of operators in terms of solutions of the initial equation is constructed for this case. All possible nonclassical reductions of the Burgers equation to single ordinary differential equations are exhaustively described. Any Lie reduction of the Burgers equation proves to be equivalent via the Hopf-Cole transformation to a parameterized family of Lie reductions of the linear heat equation.

  7. Islam and harm reduction.

    Science.gov (United States)

    Kamarulzaman, A; Saifuddeen, S M

    2010-03-01

    Although drugs are haram and therefore prohibited in Islam, illicit drug use is widespread in many Islamic countries throughout the world. In the last several years increased prevalence of this problem has been observed in many of these countries which has in turn led to increasing injecting drug use driven HIV/AIDS epidemic across the Islamic world. Whilst some countries have recently responded to the threat through the implementation of harm reduction programmes, many others have been slow to respond. In Islam, The Quran and the Prophetic traditions or the Sunnah are the central sources of references for the laws and principles that guide the Muslims' way of life and by which policies and guidelines for responses including that of contemporary social and health problems can be derived. The preservation and protection of the dignity of man, and steering mankind away from harm and destruction are central to the teachings of Islam. When viewed through the Islamic principles of the preservation and protection of the faith, life, intellect, progeny and wealth, harm reduction programmes are permissible and in fact provide a practical solution to a problem that could result in far greater damage to the society at large if left unaddressed.

  8. Microbial Fe(III) Oxide Reduction in Chocolate Pots Hot Springs, Yellowstone National Park

    Science.gov (United States)

    Fortney, N. W.; Roden, E. E.; Boyd, E. S.; Converse, B. J.

    2014-12-01

    Previous work on dissimilatory iron reduction (DIR) in Yellowstone National Park (YNP) has focused on high temperature, low pH environments where soluble Fe(III) is utilized as an electron acceptor for respiration. Much less attention has been paid to DIR in lower temperature, circumneutral pH environments, where solid phase Fe(III) oxides are the dominant forms of Fe(III). This study explored the potential for DIR in the warm (ca. 40-50°C), circumneutral pH Chocolate Pots hot springs (CP) in YNP. Most probable number (MPN) enumerations and enrichment culture studies confirmed the presence of endogenous microbial communities that reduced native CP Fe(III) oxides. Enrichment cultures demonstrated sustained DIR coupled to acetate and lactate oxidation through repeated transfers over ca. 450 days. Pyrosequencing of 16S rRNA genes indicated that the dominant organisms in the enrichments were closely affiliated with the well known Fe(III) reducer Geobacter metallireducens. Additional taxa included relatives of sulfate reducing bacterial genera Desulfohalobium and Thermodesulfovibrio; however, amendment of enrichments with molybdate, an inhibitor of sulfate reduction, suggested that sulfate reduction was not a primary metabolic pathway involved in DIR in the cultures. A metagenomic analysis of enrichment cultures is underway in anticipation of identifying genes involved in DIR in the less well-characterized dominant organisms. Current studies are aimed at interrogating the in situ microbial community at CP. Core samples were collected along the flow path (Fig. 1) and subdivided into 1 cm depth intervals for geochemical and microbiological analysis. The presence of significant quantities of Fe(II) in the solids indicated that DIR is active in situ. A parallel study investigated in vitro microbial DIR in sediments collected from three of the coring sites. DNA was extracted from samples from both studies for 16S rRNA gene and metagenomic sequencing in order to obtain a

  9. Sonoassisted microbial reduction of chromium.

    Science.gov (United States)

    Kathiravan, Mathur Nadarajan; Karthick, Ramalingam; Muthu, Naggapan; Muthukumar, Karuppan; Velan, Manickam

    2010-04-01

    This study presents sonoassisted microbial reduction of hexavalent chromium (Cr(VI)) using Bacillus sp. isolated from tannery effluent contaminated site. The experiments were carried out with free cells in the presence and absence of ultrasound. The optimum pH and temperature for the reduction of Cr(VI) by Bacillus sp. were found to be 7.0 and 37 degrees C, respectively. The Cr(VI) reduction was significantly influenced by the electron donors and among the various electron donors studied, glucose offered maximum reduction. The ultrasound-irradiated reduction of Cr(VI) with Bacillus sp. showed efficient Cr(VI) reduction. The percent reduction was found to increase with an increase in biomass concentration and decrease with an increase in initial concentration. The changes in the functional groups of Bacillus sp., before and after chromium reduction were observed with FTIR spectra. Microbial growth was described with Monod and Andrews model and best fit was observed with Andrews model.

  10. Consumer's Guide to Radon Reduction

    Science.gov (United States)

    ... Radon Share Facebook Twitter Google+ Pinterest Contact Us Consumer's Guide to Radon Reduction: How to Fix Your ... See EPA’s About PDF page to learn more. Consumer's Guide to Radon Reduction: How to Fix Your ...

  11. Multiple gas reduction strategy

    Energy Technology Data Exchange (ETDEWEB)

    A. Kurosawa [Institute of Applied Energy, Tokyo (Japan)

    2003-07-01

    Future global warming has a close relationship with the abatement potential of six greenhouse gases (GHGs), including carbon dioxide (CO{sub 2}), methane (CH{sub 4}), nitrous oxide (N{sub 2}O), hydrofluorocarbons (HFCs), perfluorocarbons (PFCs), and sulfur hexafluoride (SF6). Therefore, multiple gas reduction flexibility should be assessed. The emission of each non-CO{sub 2} GHG is calculated endogenously by the sum of the product of the emission factor and the endogenous activity index using an integrated assessment model, GRAPE (Global Relationship Assessment to Protect the Environment). The model consists of five modules dealing with issues on energy, climate, land use, macroeconomics and environmental impacts. The uncertainty in the non-CO{sub 2} GHG emission inventory and emission factors is discussed. 5 refs., 3 figs., 1 tab.

  12. Testing the reduction rule

    CERN Document Server

    Hegerfeldt, G C

    2011-01-01

    The reduction rule, also known as the projection postulate, specifies the state after an ideal measurement. There are two forms, the original rule of von Neumann and a nowadays mostly used modification thereof due to L\\"uders, but sometimes also attributed to von Neumann. However, which form applies depends on the details of the measuring apparatus. Here we therefore consider the following problem: Given an ensemble of systems in an unknown pure or mixed state, an observable $\\hat A$ and an apparatus which performs a measurement of $\\hat A$ on the ensemble, but whose detailed working is unknown ('black box'), how can one test whether the apparatus performs a L\\"uders or von Neumann measurement?

  13. Reducts of Ramsey structures

    CERN Document Server

    Bodirsky, Manuel

    2011-01-01

    One way of studying a relational structure is to investigate functions which are related to that structure and which leave certain aspects of the structure invariant. Examples are the automorphism group, the self-embedding monoid, the endomorphism monoid, or the polymorphism clone of a structure. Such functions can be particularly well understood when the relational structure is countably infinite and has a first-order definition in another relational structure which has a finite language, is totally ordered and homogeneous, and has the Ramsey property. This is because in this situation, Ramsey theory provides the combinatorial tool for analyzing these functions -- in a certain sense, it allows to represent such functions by functions on finite sets. This is a survey of results in model theory and theoretical computer science obtained recently by the authors in this context. In model theory, we approach the problem of classifying the reducts of countably infinite ordered homogeneous Ramsey structures in a fin...

  14. Particle size effect and the mechanism of hematite reduction by the outer membrane cytochrome OmcA of Shewanella oneidensis MR-1

    Energy Technology Data Exchange (ETDEWEB)

    Liu, Juan; Pearce, Carolyn I.; Shi, Liang; Wang, Zheming; Shi, Zhi; Arenholz, Elke; Rosso, Kevin M.

    2016-11-01

    The cycling of iron at the Earth’s near surface is profoundly influenced by dissimilatory metal reducing microorganisms, and many studies have focused on unraveling electron transfer mechanisms between these bacteria and Fe(III)-(oxyhydr)oxides. However, these efforts have been complicated by the fact that these minerals often occur in the micro- to nanosize regime, and in relevant natural environments as well as in the laboratory are subject to aggregation. The nature of the physical interface between the cellular envelope, the outer-membrane cytochromes responsible for facilitating the interfacial electron transfer step, and these complex mineral particulates is thus difficult to probe. Previous studies using whole cells have reported reduction rates that do not correlate with particle size. In the present study we isolate the interaction between the decaheme outer-membrane cytochrome OmcA of Shewanella oneidensis and nanoparticulate hematite, examining the reduction rate as a function of particle size and reaction products through detailed characterization of the electron balance and the structure and valence of iron at particle surfaces. By comparison with abiotic reduction via the smaller molecule ascorbic acid, we show that the reduction rate is systematically controlled by the sterically accessible interfacial contact area between OmcA and hematite in particle aggregates; rates increase once pore throat sizes in aggregates become as large as OmcA. Simultaneous measure of OmcA oxidation against Fe(II) release shows a ratio of 1:10, consistent with a cascade OmcA oxidation mechanism heme by heme. X-ray absorption spectroscopies reveal incipient magnetite on the reacted surfaces of the hematite nanoparticles after reaction. The collective findings establish the importance of accessibility of physical contact between the terminal reductases and iron oxide surfaces, and through apparent consistency of observations help reconcile behavior reported at the larger

  15. Particle size effect and the mechanism of hematite reduction by the outer membrane cytochrome OmcA of Shewanella oneidensis MR-1

    Science.gov (United States)

    Liu, Juan; Pearce, Carolyn I.; Shi, Liang; Wang, Zheming; Shi, Zhi; Arenholz, Elke; Rosso, Kevin M.

    2016-11-01

    The cycling of iron at the Earth's near surface is profoundly influenced by dissimilatory metal reducing microorganisms, and many studies have focused on unraveling electron transfer mechanisms between these bacteria and Fe(III)-(oxyhydr)oxides. However, these efforts have been complicated by the fact that these minerals often occur in the micro- to nanosize regime, and in relevant natural environments as well as in the laboratory are subject to aggregation. The nature of the physical interface between the cellular envelope, the outer-membrane cytochromes responsible for facilitating the interfacial electron transfer step, and these complex mineral particulates is thus difficult to probe. Previous studies using whole cells have reported reduction rates that do not correlate with particle size. In the present study we isolate the interaction between the decaheme outer-membrane cytochrome OmcA of Shewanella oneidensis and nanoparticulate hematite, examining the reduction rate as a function of particle size and reaction products through detailed characterization of the electron balance and the structure and valence of iron at particle surfaces. By comparison with abiotic reduction via the smaller molecule ascorbic acid, we show that the reduction rate is systematically controlled by the sterically accessible interfacial contact area between OmcA and hematite in particle aggregates; rates increase once pore throat sizes in aggregates become as large as OmcA. Simultaneous measure of OmcA oxidation against Fe(II) release shows a ratio of 1:10, consistent with a cascade OmcA oxidation mechanism heme by heme. X-ray absorption spectroscopies reveal incipient magnetite on the reacted surfaces of the hematite nanoparticles after reaction. The collective findings establish the importance of accessibility of physical contact between the terminal reductases and iron oxide surfaces, and through apparent consistency of observations help reconcile behavior reported at the larger

  16. Humic substance-mediated Fe(III) reduction by a fermenting Bacillus strain from the alkaline gut of a humus-feeding scarab beetle larva.

    Science.gov (United States)

    Hobbie, Sven N; Li, Xiangzhen; Basen, Mirko; Stingl, Ulrich; Brune, Andreas

    2012-06-01

    Humus-feeding macroinvertebrates play an important role in the transformation of soil organic matter. Their diet contains significant amounts of redox-active components such as iron minerals and humic substances. In soil-feeding termites, acid-soluble Fe(III) and humic acids are almost completely reduced during gut passage. Here, we show that the reduction of Fe(III) and humic acids takes place also in the alkaline guts of scarab beetle larvae. Sterilized gut homogenates of Pachnoda ephippiata no longer converted Fe(III) to Fe(II), indicating an essential role of the gut microbiota in the process. From Fe(III)-reducing enrichment cultures inoculated with highly diluted gut homogenates, we isolated several facultatively anaerobic, alkali-tolerant bacteria that were closely related to metal-reducing isolates in the Bacillus thioparans group. Strain PeC11 showed a remarkable capacity for dissimilatory Fe(III) reduction, both at pH 7 and 10. Rates were strongly stimulated by the addition of the redox mediator 2,6-antraquinone disulfonate and by redox-active components in the fulvic-acid fraction of humus. Although the contribution of strain PeC11 to intestinal Fe(III) reduction in P. ephippiata remains to be further elucidated, our results corroborate the hypothesis that the lack of oxygen and the solubilization of humic substances in the extremely alkaline guts of humivorous soil fauna provide favorable conditions for the efficient reduction of Fe(III) and humic substances by a primarily fermentative microbiota.

  17. Dose Reduction Techniques

    Energy Technology Data Exchange (ETDEWEB)

    WAGGONER, L.O.

    2000-05-16

    As radiation safety specialists, one of the things we are required to do is evaluate tools, equipment, materials and work practices and decide whether the use of these products or work practices will reduce radiation dose or risk to the environment. There is a tendency for many workers that work with radioactive material to accomplish radiological work the same way they have always done it rather than look for new technology or change their work practices. New technology is being developed all the time that can make radiological work easier and result in less radiation dose to the worker or reduce the possibility that contamination will be spread to the environment. As we discuss the various tools and techniques that reduce radiation dose, keep in mind that the radiological controls should be reasonable. We can not always get the dose to zero, so we must try to accomplish the work efficiently and cost-effectively. There are times we may have to accept there is only so much you can do. The goal is to do the smart things that protect the worker but do not hinder him while the task is being accomplished. In addition, we should not demand that large amounts of money be spent for equipment that has marginal value in order to save a few millirem. We have broken the handout into sections that should simplify the presentation. Time, distance, shielding, and source reduction are methods used to reduce dose and are covered in Part I on work execution. We then look at operational considerations, radiological design parameters, and discuss the characteristics of personnel who deal with ALARA. This handout should give you an overview of what it takes to have an effective dose reduction program.

  18. Alcohol harm reduction in Europe

    DEFF Research Database (Denmark)

    Herring, Rachel; Betsy, Thom; Beccaria, Franca

    2010-01-01

    The EMCDDA’s 10th scientific monograph, entitled Harm reduction: evidence, impacts and challenges provides a comprehensive overview of the harm reduction field. Part I of the monograph looks back at the emergence of harm reduction approaches and their diffusion, and explores the concept from diff...

  19. Abstract models of transfinite reductions

    DEFF Research Database (Denmark)

    Bahr, Patrick

    2010-01-01

    We investigate transfinite reductions in abstract reduction systems. To this end, we study two abstract models for transfinite reductions: a metric model generalising the usual metric approach to infinitary term rewriting and a novel partial order model. For both models we distinguish between...

  20. Phase formation and chemical phase equilibria in aqueous-based systems pertinent to waste-management: calcium oxide-alluminum oxide-borate-water, calcium oxide-lead oxide-phosphate-water and calcium oxide-arsenate-water

    Science.gov (United States)

    Bothe, James Vincent, Jr.

    -ettringite and 28.51 for 4CaO{*}Alsb2Osb3{*}1/2Bsb2Osb3{*}12Hsb2O. The formation of a solid-solution series between the two apatites, Casb{10}(POsb4)sb6(OH)sb2 and Pbsb{10}(POsb4)sb6(OH)sb2, under ambient conditions and using only oxide starting materials was studied. It was observed that under those conditions, a very limited range of miscibility occurred resulting in the formation of the quaternary apatite, Pbsb{x}Casb{10-x}(POsb4)sb6(OH)sb2 where 5≤ xmagnesium impurity, whereas the arsenate-apatite formed phase-pure only in the absence of magnesium impurity. This can be advantageous in the sense that the arsenate ion is assured to be stabilized via the precipitation of either one or the other, making the presence of magnesium impurity inconsequential under those conditions which precipitate these two stable hydrates.

  1. Reduction, methylation, and translocation of arsenic in Panax notoginseng grown under field conditions in arsenic-contaminated soils.

    Science.gov (United States)

    Ma, Jie; Mi, Yanhua; Li, Qiwan; Chen, Lu; Du, Lijuan; He, Lizhong; Lei, Mei

    2016-04-15

    Variations in arsenic (As) species in Panax notoginseng grown under field conditions remain understudied compared with those under greenhouse conditions. In the present study, soil and plant samples were collected from Wenshan Zhuang and Miao Autonomous Prefecture, Yunnan Province, which is the main production area of P. notoginseng in China, to identify As species in the soil and plant tissues and further assess effect of As toxic stress on As transformation and translocation in P. notoginseng. The results showed that arsenate (As(V)) was almost exclusively identified in the soil, while arsenite (As(III)) and monomethylarsonic acid (MMA) were detected in high proportions in plant tissues, suggesting that As(V) could be reduced and subsequently methylated in the plant body, mainly in the root. The reduction and methylation of As in the root of P. notoginseng were promoted by low As toxic stress, but were impeded by high As toxic stress. Arsenic(III) and MMA could rapidly translocate upwards in P. notoginseng. In addition, the translocation of total As, As(III), and MMA from the root to the rhizome was a response to As toxic stress, and the translocation rate increased with the increasing As concentration in the taproot. This study provides new insights into the detoxification mechanism of P. notoginseng grown in As-contaminated soils and the control of As during cultivation.

  2. Impact of wastewater derived dissolved organic carbon on reduction, mobility, and bioavailability of As(V) and Cr(VI) in contaminated soils.

    Science.gov (United States)

    Kunhikrishnan, Anitha; Choppala, Girish; Seshadri, Balaji; Wijesekara, Hasintha; Bolan, Nanthi S; Mbene, Kenneth; Kim, Won-Il

    2017-01-15

    In this work, the effects of various wastewater sources (storm water, sewage effluent, piggery effluent, and dairy effluent) on the reduction, and subsequent mobility and bioavailability of arsenate [As(V)] and chromate [Cr(VI)] were compared using both spiked and field contaminated soils. Wastewater addition to soil can increase the supply of carbon, nutrients, and stimulation of microorganisms which are considered to be important factors enhancing the reduction of metal(loid)s including As and Cr. The wastewater-induced mobility and bioavailability of As(V) and Cr(VI) were examined using leaching, earthworm, and soil microbial activity tests. The rate of reduction of As(V) was much less than that of Cr(VI) both in the presence and absence of wastewater addition. Wastewater addition increased the reduction of both As(V) and Cr(VI) compared to the control (Milli-Q water) and the effect was more pronounced in the case of Cr(VI). The leaching experiment indicated that Cr(VI) was more mobile than As(V). Wastewater addition increased the mobility and bioavailability of As(V), but had an opposite effect on Cr(VI). The difference in the mobility and bioavailability of Cr(VI) and As(V) between wastewater sources can be attributed to the difference in their dissolved organic carbon (DOC) content. The DOC provides carbon as an electron donor for the reduction of As(V) and Cr(VI) and also serves as a complexing agent thereby impacting their mobility and bioavailability. The DOC-induced reduction increased both the mobility and bioavailability of As, but it caused an opposite effect in the case of Cr.

  3. 一个编码含VQ模序蛋白的基因AtARVQ1参与拟南芥对砷酸盐的响应调控%AtARVQ1 encodes a novel VQ motif-containing protein involved in arsenate stress response regulation in Arabidopsis

    Institute of Scientific and Technical Information of China (English)

    刘安娜; 腾瑶; 徐文忠; 麻密

    2011-01-01

    Arsenate is a highly toxic heavy metal containing compound poisonous to most living organisms, including human and plants. We report that the AtARVQl gene encodes a plant-specific VQ motif-containing protein involved in the response and resistance of Arabidopsis to arsenate stress. The expression of AtARVQl was strongly downregulated by arsenate stress. To determine the function of AtARVQl in planta, transgenic Arabidopsis plants expressing AtARVQl driven by a CaMV-35S promoter were generated. Overexpressing transgenic lines with high levels of AtARVQl expression were observed to be more resistant to arsenate stress. Moreover, phylogenetic analysis showed that all homologs of AtARVQl were plant-specific and evolved from two primitive branches, which were classified into four clusters. The AtARVQl-like proteins in dicots and bryophyta were segregated into the two branches, whereas those in monocot plants all fall into one sub-branch. These results suggest that AtARVQl and its homologs may have important roles in the plant response to arsenate stress.%砷酸盐(Asv)是一种对包括人类和植物在内大部分生物具有剧毒的重金属.结果显示,编码含植物特有VQ模序蛋白基因AtARVQl (arsenate-_repressed V__Q motif-containing protein 1)参与拟南芥对Asv应答和抗性调控.结果表明,砷酸盐胁迫强烈抑制AtARVQ1基因在拟南芥中的转录表达.进一步利用组成型启动子CaMV 35S驱动AtARVQ1基因在拟南芥中的表达,获得在砷酸盐处理条件下增强AtARVQ1基因转录的超表达植株,发现超表达AtARVQ1可以明显提高拟南芥对砷酸盐的抗性水平.系统进化分析发现,含VQ模序结构的AtARVQ1同源基因为植物特有,并进化出两大分支4个子分支,这类同源基因在双子叶植物和苔藓中分布于两大分支上,而在单子叶植物中仅分布在同一子分支上.这些结果表明,AtAR VQ1基因在拟南芥对砷酸盐的抗性应答上有着重要作用,而其同源基因

  4. Comparative study of Nd:YAG laser-induced breakdown spectroscopy and transversely excited atmospheric CO2 laser-induced gas plasma spectroscopy on chromated copper arsenate preservative-treated wood.

    Science.gov (United States)

    Khumaeni, Ali; Lie, Zener Sukra; Niki, Hideaki; Lee, Yong Inn; Kurihara, Kazuyoshi; Wakasugi, Motoomi; Takahashi, Touru; Kagawa, Kiichiro

    2012-03-01

    Taking advantage of the specific characteristics of a transversely excited atmospheric (TEA) CO(2) laser, a sophisticated technique for the analysis of chromated copper arsenate (CCA) in wood samples has been developed. In this study, a CCA-treated wood sample with a dimension of 20 mm × 20 mm and a thickness of 2 mm was attached in contact to a nickel plate (20 mm × 20 mm × 0.15 mm), which functions as a subtarget. When the TEA CO(2) laser was successively irradiated onto the wood surface, a hole with a diameter of approximately 2.5 mm was produced inside the sample and the laser beam was directly impinged onto the metal subtarget. Strong and stable gas plasma with a very large diameter of approximately 10 mm was induced once the laser beam had directly struck the metal subtarget. This gas plasma then interacted with the fine particles of the sample inside the hole and finally the particles were effectively dissociated and excited in the gas plasma region. By using this technique, high precision and sensitive analysis of CCA-treated wood sample was realized. A linear calibration curve of Cr was successfully made using the CCA-treated wood sample. The detection limits of Cr, Cu, and As were estimated to be approximately 1, 2, and 15 mg/kg, respectively. In the case of standard LIBS using the Nd:YAG laser, the analytical intensities fluctuate and the detection limit was much lower at approximately one-tenth that of TEA CO(2) laser. © 2012 Optical Society of America

  5. Effects of Sodium Arsenite and Sodium Arsenate on Expression of DNA and Arsenic Methyltransferases in Rats%不同价态砷对DNA和砷甲基转移酶的影响

    Institute of Scientific and Technical Information of China (English)

    吴军; 师喆; 郑玉建; 刘冬梅; 姜平

    2012-01-01

    Objective To investigate the influence on arsenic methyltransferase (As3MT) and DNA methyltransferase (DNMT1, DNMT3A, DNMT3B) mRNA expression in rats liver treated with sodium arsenite and sodium arsenate and seek for the difference of DNA and arsenic methylation and both' s correlation between sodium arsenite and sodium arsenate (iAs3+ and iAs5+). Methods Different valence state and doses of arsenic were administrated through drinking water to Wistar rats,male rats were divided into seven group randomly,five in each group,control group (deionized water),sodium arsenite low dose group (1/45 LD50,2.33 mg/kg),moderate dose group (1/15 LD50,6.67 mg/kg),high dose group (1/5 LD50,20.00 mg/kg) administrated with different concentrations of sodium arsenite; sodium arsenate low dose group (1/45 LD50,2.33 mg/kg), moderate dose group (1/15 LD50,6.67 mg/kg),high dose group (1/5 LD50,20.00 mg/kg) administrated with different concentrations of sodium arsenate. The reagents were given through drinking water, for 90 consecutive days. At the end of the third month, the rats were sacrificed to collect the liver,and the expression of DNA and arsenic methyltransferase were detected by real-time PCR in liver genome mRNA. Results The difference of As3MT and DNA methyltransferase mRNA expression in every group was significant (P<0.05) compared with the control group; the expression of As3MT mRNA increased and the expression of DNMT3A and DNMT3B mRNA were decreased in arsenic the exposed group; the expression of DNMT1 mRNA increased in high and low iAs3+ exposed group and in high iAs5+ exposed group,the expression of DNMT1 mRNA decreased in moderate iAs3+ exposed group and in low iAs5+ exposed group. With the increasing dose of iAs3+,As3MT mRNA expression showed an increasing trend and DNMT3A and DNMT3B mRNA expression showed a decresing trend in iAs3+ group; with the increase of iAs5+ dose,As3MT mRNA expression showed a decreasing trend and DNMT3A,DNMT3B and DNMT1 mRNA expression

  6. Heart Failure Readmission Reduction.

    Science.gov (United States)

    Drozda, Joseph P; Smith, Donna A; Freiman, Paul C; Pursley, Janet; VanSlette, Jeffrey A; Smith, Timothy R

    Little is known regarding effectiveness of readmission reduction programs over time. The Heart Failure Management Program (HFMP) of St. John's Physician Group Practice (PGP) Demonstration provided an opportunity to assess outcomes over an extended period. Data from an electronic health record, an inpatient database, a disease registry, and the Social Security Death Master File were analyzed for patients admitted with heart failure (HF) for 5 years before (Period 1) and 5 years after (Period 2) inception of PGP. HF admissions decreased (Period 1, 58.3/month; Period 2, 52.4/month, P = .007). Thirty-day all-cause readmission rate dropped from Period 1 (annual average 18.8% [668/3545]) to year 1 of Period 2 (16.9% [136/804], P = .04) and remained stable thereafter (annual average 16.8% [589/3503]). Thirty-day mortality rate was flat throughout. HFMP was associated with decreased readmissions, primarily related to outpatient case management, while mortality remained stable.

  7. Electrochemical reduction of NOx

    DEFF Research Database (Denmark)

    Traulsen, Marie Lund

    NO and NO2 (collect