WorldWideScience

Sample records for discontinuous density gradient

  1. Integer Discontinuity of Density Functional Theory

    CERN Document Server

    Mosquera, Martin A

    2014-01-01

    Density functional approximations to the exchange-correlation energy of Kohn-Sham theory, such as the local density approximation and generalized gradient approximations, lack the well-known integer discontinuity, a feature that is critical to describe molecular dissociation correctly. Moreover, standard approximations to the exchange-correlation energy also fail to yield the correct linear dependence of the ground-state energy on the number of electrons when this is a non-integer number obtained from the grand canonical ensemble statistics. We present a formal framework to restore the integer discontinuity of any density functional approximation. Our formalism derives from a formula for the exact energy functional and a new constrained search functional that recovers the linear dependence of the energy on the number of electrons.

  2. Energy in density gradient

    CERN Document Server

    Vranjes, J

    2015-01-01

    Inhomogeneous plasmas and fluids contain energy stored in inhomogeneity and they naturally tend to relax into lower energy states by developing instabilities or by diffusion. But the actual amount of energy in such inhomogeneities has remained unknown. In the present work the amount of energy stored in a density gradient is calculated for several specific density profiles in a cylindric configuration. This is of practical importance for drift wave instability in various plasmas, and in particular in its application in models dealing with the heating of solar corona because the instability is accompanied with stochastic heating, so the energy contained in inhomogeneity is effectively transformed into heat. It is shown that even for a rather moderate increase of the density at the axis in magnetic structures in the corona by a factor 1.5 or 3, the amount of excess energy per unit volume stored in such a density gradient becomes several orders of magnitude greater than the amount of total energy losses per unit ...

  3. Energy in density gradient

    Energy Technology Data Exchange (ETDEWEB)

    Vranjes, J., E-mail: jvranjes@yahoo.com [Instituto de Astrofísica de Canarias, 38205 La Laguna, Tenerife (Spain); Departamento de Astrofísica, Universidad de La Laguna, 38205 La Laguna, Tenerife (Spain); Kono, M., E-mail: kono@fps.chuo-u.ac.jp [Faculty of Policy Studies, Chuo University, Tokyo (Japan)

    2015-01-15

    Inhomogeneous plasmas and fluids contain energy stored in inhomogeneity and they naturally tend to relax into lower energy states by developing instabilities or by diffusion. But the actual amount of energy in such inhomogeneities has remained unknown. In the present work, the amount of energy stored in a density gradient is calculated for several specific density profiles in a cylindrical configuration. This is of practical importance for drift wave instability in various plasmas, and, in particular, in its application in models dealing with the heating of solar corona because the instability is accompanied with stochastic heating, so the energy contained in inhomogeneity is effectively transformed into heat. It is shown that even for a rather moderate increase of the density at the axis in magnetic structures in the corona by a factor 1.5 or 3, the amount of excess energy per unit volume stored in such a density gradient becomes several orders of magnitude greater than the amount of total energy losses per unit volume (per second) in quiet regions in the corona. Consequently, within the life-time of a magnetic structure such energy losses can easily be compensated by the stochastic drift wave heating.

  4. Discontinuous gradient constraints and the infinity Laplacian

    CERN Document Server

    Juutinen, Petri; Rossi, Julio D

    2012-01-01

    Motivated by tug-of-war games and asymptotic analysis of certain variational problems, we consider a gradient constraint problem involving the infinity Laplace operator. We prove that this problem always has a solution that is unique if a certain regularity condition on the constraint is satisfied. If this regularity condition fails, then solutions obtained from game theory and $L^p$-approximation need not coincide.

  5. Discontinuous Galerkin finite element methods for gradient plasticity.

    Energy Technology Data Exchange (ETDEWEB)

    Garikipati, Krishna. (University of Michigan, Ann Arbor, MI); Ostien, Jakob T.

    2010-10-01

    In this report we apply discontinuous Galerkin finite element methods to the equations of an incompatibility based formulation of gradient plasticity. The presentation is motivated with a brief overview of the description of dislocations within a crystal lattice. A tensor representing a measure of the incompatibility with the lattice is used in the formulation of a gradient plasticity model. This model is cast in a variational formulation, and discontinuous Galerkin machinery is employed to implement the formulation into a finite element code. Finally numerical examples of the model are shown.

  6. Accurate and robust methods for variable density incompressible flows with discontinuities

    Energy Technology Data Exchange (ETDEWEB)

    Rider, W.J.; Kothe, D.B.; Puckett, E.G.

    1996-09-01

    We are interested in the solution of incompressible flows which are characterized by large density variations, interfacial physics, arbitrary material topologies and strong vortical content. The issues present in constant density incompressible flow are exacerbated by the presence of density discontinuities. A much greater premium requirement is placed the positivity of computed quantities The mechanism of baroclinc vorticity generation exists ({gradient}p x {gradient}p) to further complicate the physics.

  7. A gradient estimate for solutions to parabolic equations with discontinuous coefficients

    Directory of Open Access Journals (Sweden)

    Jishan Fan

    2013-04-01

    Full Text Available Li-Vogelius and Li-Nirenberg gave a gradient estimate for solutions of strongly elliptic equations and systems of divergence forms with piecewise smooth coefficients, respectively. The discontinuities of the coefficients are assumed to be given by manifolds of codimension 1, which we called them emph{manifolds of discontinuities}. Their gradient estimate is independent of the distances between manifolds of discontinuities. In this paper, we gave a parabolic version of their results. That is, we gave a gradient estimate for parabolic equations of divergence forms with piecewise smooth coefficients. The coefficients are assumed to be independent of time and their discontinuities are likewise the previous elliptic equations. As an application of this estimate, we also gave a pointwise gradient estimate for the fundamental solution of a parabolic operator with piecewise smooth coefficients. Both gradient estimates are independent of the distances between manifolds of discontinuities.

  8. Faranoff-Riley type I jet deceleration at density discontinuities

    NARCIS (Netherlands)

    Meliani, Z.; Keppens, R.; Giacomazzo, B.

    2008-01-01

    Aims. We propose a model that could explain the sudden jet deceleration in active galactic nuclei, thereby invoking density discontinuities. Motivated particularly by recent indications from HYbrid MOrphology Radio Sources (HYMORS) that Fanaroff-Riley classification is induced in some cases by varia

  9. Faranoff-Riley type I jet deceleration at density discontinuities

    NARCIS (Netherlands)

    Meliani, Z.; Keppens, R.; Giacomazzo, B.

    2008-01-01

    Aims. We propose a model that could explain the sudden jet deceleration in active galactic nuclei, thereby invoking density discontinuities. Motivated particularly by recent indications from HYbrid MOrphology Radio Sources (HYMORS) that Fanaroff-Riley classification is induced in some cases by

  10. Faranoff-Riley type I jet deceleration at density discontinuities

    OpenAIRE

    Meliani, Z.; Keppens, R.; Giacomazzo, B.

    2008-01-01

    Aims. We propose a model that could explain the sudden jet deceleration in active galactic nuclei, thereby invoking density discontinuities. Motivated particularly by recent indications from HYbrid MOrphology Radio Sources (HYMORS) that Fanaroff-Riley classification is induced in some cases by variations in the density of the external medium. We explore how one-sided jet deceleration and a transition to FR I type can occur in HYMORS, which start as FR II (and remain so on the other side). Met...

  11. Radio Scintillation due to Discontinuities in the Interstellar Plasma Density

    CERN Document Server

    Lambert, H; Lambert, Hendrik; Rickett, Barney

    1999-01-01

    We develop the theory of interstellar scintillation as caused by an irregular plasma having a power-law spatial density spectrum with a spectral exponent of 4 corresponding to a medium with abrupt changes in its density. An ``outer scale'' is included in the model representing the typical scale over which the density of the medium remains uniform. Such a spectrum could be used to model plasma shock fronts in supernova remnants or other plasma discontinuities. We investigate and develop equations for the decorrelation bandwidth of diffractive scintillations and the refractive scintillation index and compare our results with pulsar measurements. We consider both a medium concentrated in a thin layer and an extended irregular medium. We conclude that the discontinuity model gives satisfactory agreement for many diffractive measurements, in particular the VLBI meaurements of the structure function exponent between 5/3 and 2. However, it gives less satisfactory agreement for the refractive scintillation index than...

  12. Fabrication and evaluation of uniform and gradient density epoxies

    Energy Technology Data Exchange (ETDEWEB)

    Domeier, L.A.; Skala, D.M.; Goods, S.H. [and others

    1997-11-01

    Filled epoxy materials which vary in density in a designed manner have been fabricated and their mechanical properties evaluated. Density variations were produced by incorporating different volume fractions of either glass microballoons (GMB) or alumina. Several different sample types were evaluated including uniform density (0.8 g/cm{sup 3} < {rho} < 2.0 g/cm{sup 3}) samples and gradient density samples (GMB only, 0.8 g/cm{sup 3} < {rho} < 1.2 g/cm{sup 3}). The uniform density specimens were evaluated for the effects of filler type and concentration on modulus and toughness. Results indicated that addition of alumina filler significantly increased the resulting modulus while addition of GMB had little measurable effect. These differences could be understood in terms of the differing moduli of the additives relative to that of the epoxy matrix. In the former case the alumina particulates had a modulus much greater than that of the epoxy while in the latter case, the modulus of the GMB additive was only slightly greater than that of the matrix. Addition of either filler significantly degraded the toughness of the composite specimens and precluded the use of gradients to enhance toughness performance. Discontinuous {open_quotes}block{close_quotes} gradients used for testing were fabricated by simple sequential pours of formulations with different GMB loadings and were evaluated for modulus, strength and ductility. Continuous gradients were fabricated in process studies by programmed shifts in the peristaltic pumping/mixing ratio of epoxies filled with either alumina or GMB. None of the continuous gradient materials were mechanically tested. These results suggest that applications utilizing gradient materials containing alumina and similar high modulus fillers to provide designed stiffness rather than improved toughness are the most appropriate targets for future investigation.

  13. Effects of Density Gradients on Braneworld Stars

    Science.gov (United States)

    Ovalle, Jorge

    During the last few years the braneworld consequences on general relativity have been studied with great interest. The implications in both, cosmological and astrophysics scenarios, have been considered for many authors. However there are some aspects of braneworld consequences which have not been clearly elucidated yet. For instance, the role played for density gradients in the astrophysics scenario is not clear so far, leaving thus the study of braneworld stars as one of the most difficult scenarios. Here it is shown an approach which allows the study of density gradients and their consequences through the Weyl fluid produced inside a stellar distributions. Some general aspects are discussed in detail.

  14. Interplay between transport barriers and density gradient

    Science.gov (United States)

    Sarazin, Y.; Grandgirard, V.; Dif-Pradalier, G.; Garbet, X.; Ghendrih, Ph.

    2006-09-01

    The present paper addresses two critical issues of zonal flows: the evidence of control parameters of their driving term, namely the Reynolds stress, and how they back-react on turbulence and transport. Kinetic nonlinear simulations are performed with the GYSELA code [V. Grandgirard et al., J. Comput. Phys. (to be published)], which models the slab branch of the ion temperature gradient driven instability in the four-dimensional drift-kinetic regime. First, the numerical results show that the gradient of the guiding center density, related to the general potential vorticity, is stabilizing both linearly, by increasing the instability threshold, and nonlinearly, by activating zonal flows. Accordingly, the Reynolds stress is found to scale like LΩ-2 in the quasilinear regime, LΩ being the gradient length of the guiding center density. Second, the local temperature gradient appears to increase linearly with the curvature of the zonal flows, regardless of its sign. Such behavior agrees qualitatively with a perturbative theory. Indeed, while linear eigenmodes are localized at the maximum of the temperature gradient in the absence of zonal flows, they tend to be expelled if both exhibit a maximum at the same location. In this case, the reduction mechanism of the turbulent transport results from the ability of large zonal flow curvatures to render strong temperature gradients stable with respect to perturbations.

  15. GPS, GNSS, and Ionospheric Density Gradients

    Science.gov (United States)

    Kintner, P. M.; O'Hanlon, B.; Humphreys, T. E.

    2009-12-01

    Ionospheric density and density gradients affect GNSS signals in two ways. They can introduce ranging errors or irregularities that form on the density gradients producing scintillation. Here we focus on the issue of ranging errors. There are two approaches to mitigating ranging errors produced by ionospheric density gradients which can be 20-30 m during major magnetic storms. The first approach is to use a reference receiver(s) to determine the ionospheric contribution to ranging errors. The ranging error is then transmitted to the user for correction within the mobile receiver. This approach is frequently referred to as differential GPS and, when multiple reference receivers are used, the system is referred to as an augmentation system. This approach is vulnerable to ionospheric gradients depending on the reference receiver spacing(s) and latency in applying the correction within the mobile receiver. The second approach is to transmit navigation signals at two frequencies and then use the relative delay between the two signals to both estimate the ranging error and calculate the correct range. Currently the dual frequency technique is used by US military receivers with an encryption key and some civilian receivers which must be stationary and average over times long compared to those required for navigation. However, the technology of space based radio navigation is changing. GPS will soon be a system with three frequencies and multiple codes. Furthermore Europe, Russia, and China are developing independent systems to complement and compete with GPS while India and Japan are developing local systems to enhance GPS performance in their regions. In this talk we address two questions. How do density gradients affect augmentation systems including the social consequences and will the new GPS/GNSS systems with multiple civilian frequencies be able to remove ionospheric errors. The answers are not at all clear.

  16. Bow-shock Pulsar Wind Nebulae Passing Through Density Discontinuities

    CERN Document Server

    Yoon, Doosoo

    2016-01-01

    Bow-shock pulsar wind nebulae are a subset of pulsar wind nebulae that form when the pulsar has high velocity due to the natal kick during the supernova explosion. The interaction between the relativistic wind from the fast-moving pulsar and the interstellar medium produces a bow-shock and a trail, which are detectable in H$_{\\alpha}$ emission. Among such bow-shock pulsar wind nebulae, the Guitar Nebula stands out for its peculiar morphology, which consists of a prominent bow-shock head and a series of bubbles further behind. We present a scenario in which multiple bubbles can be produced when the pulsar encounters a series of density discontinuities in the ISM. We tested the scenario using 2-D and 3-D hydrodynamic simulations. The shape of the guitar nebula can be reproduced if the pulsar traversed a region of declining low density. We also show that if a pulsar encounters an inclined density discontinuity, it produces an asymmetric bow-shock head, consistent with observations of the bow-shock of the millise...

  17. Effects of centrifugation through three different discontinuous Percoll gradients on boar sperm function.

    Science.gov (United States)

    Matás, C; Vieira, L; García-Vázquez, F A; Avilés-López, K; López-Úbeda, R; Carvajal, J A; Gadea, J

    2011-08-01

    In this study, different combinations of 2-step, discontinuous gradient centrifugation were used, consisting of three different combinations of isotonic Percoll (45/60, 60/75 and 45/90%) that allowed us to select different sperm subpopulations from fertile and normozoospermic boars. Our objective in this study is to evaluate the effects of centrifugation through three different discontinuous Percoll gradients on sperm function parameters (motility, viability, morphology, acrosome status, chromatin condensation, DNA fragmentation, ROS generation, tyrosine phosphorylation and intracellular calcium concentration) and the sperm penetrating capacity in an IVF system. All the Percoll treatments evaluated increased the percentage of spermatozoa with normal morphology, the proportion of un-damaged DNA, normal chromatin condensation, motion parameters measured by CASA and the percentage of capacitated spermatozoa with tyrosine phosphorylated proteins compared to control group. Finally, the in vitro oocyte penetrating capacity of boar spermatozoa was significantly affected by Percoll centrifugation. All the Percoll treatments increased the penetration rates and mean number of sperm per penetrated oocyte. Despite the efficiency of all three of the sperm treatments tested in selecting spermatozoa with improved sperm parameters and capacity to penetrate oocytes in vitro, the optimum performance of this system was demonstrated after preselecting spermatozoa by centrifugation on a discontinuous 45/90 Percoll gradient. The P45/90 treatment leads to obtain a higher percentage of spermatozoa which develop properly the capacitation process as it was shown measuring tyrosine phosphorylation and intracellular calcium concentration.

  18. Regularized Multitask Learning for Multidimensional Log-Density Gradient Estimation.

    Science.gov (United States)

    Yamane, Ikko; Sasaki, Hiroaki; Sugiyama, Masashi

    2016-07-01

    Log-density gradient estimation is a fundamental statistical problem and possesses various practical applications such as clustering and measuring nongaussianity. A naive two-step approach of first estimating the density and then taking its log gradient is unreliable because an accurate density estimate does not necessarily lead to an accurate log-density gradient estimate. To cope with this problem, a method to directly estimate the log-density gradient without density estimation has been explored and demonstrated to work much better than the two-step method. The objective of this letter is to improve the performance of this direct method in multidimensional cases. Our idea is to regard the problem of log-density gradient estimation in each dimension as a task and apply regularized multitask learning to the direct log-density gradient estimator. We experimentally demonstrate the usefulness of the proposed multitask method in log-density gradient estimation and mode-seeking clustering.

  19. Pancreatic islet isolation by mechanical-enzymatic separation, stationary collagenase digestion and dextran discontinuous density gradient purification: experimental study in dogs Isolamento das ilhotas pancreáticas pela separação mecânica-enzimática digestão estacionária com colagenase e purificação com gradiente de densidade descontínua de dextran: estudo experimental em cães

    Directory of Open Access Journals (Sweden)

    Jaques Waisberg

    2002-04-01

    Full Text Available The prospects for allotransplantation of pancreatic islets in man depend on the development of methods that provide sufficient quantities of pancreatic islets from a single donor, which are capable, when transplanted, of achieve the normalization of carbohydrate metabolism. Objective: Evaluate the efficacy of the isolation of Langerhans islets from dogs, by means of mechanical-enzymatic separation technique with stationary digestion using collagenase, and purification with a discontinuous dextran density gradient. Methods: The counting of islet numbers and evaluation of their sizes was accomplished by staining with diphenylthiocarbazone and using stereoscopic microscopes equipped with eyepiece reticule for the measurement of average diameters of stained islets. Results: The results disclosed that the average number of islets isolated was 81032.20 ± 24736.79 and the average number of islets isolated per kg of body weight was 6938.70 ± 1392.43. The average number of islets isolated per kg of body weight showed significant correlation with body weight and weight of the pancreas resected. Conclusion: The number of islets isolated, of a single donor, by mechanical-enzymatic separation, stationary collagenase digestion and discontinuous dextran density gradient purification can be sufficient to success of pancreatic islets transplant in dogs.A perspectiva do alotransplante de ilhotas pancreáticas no homem está na dependência do desenvolvimento de métodos que propiciem quantidades suficientes de ilhotas pancreáticas, originadas de doador único, capazes de, quando transplantadas, levarem à normalização do metabolismo dos hidratos de carbono. Objetivo: Avaliar, em cães, a eficácia do isolamento das ilhotas de Langerhans por meio da técnica de separação mecânica-enzimática, digestão estacionária com colagenase e purificação pelo gradiente de densidade descontínua de dextran. Métodos: A contagem do número e avaliação do tamanho

  20. Density Gradient Stabilization of Electron Temperature Gradient Driven Turbulence in a Spherical Tokamak

    Energy Technology Data Exchange (ETDEWEB)

    Ren, Y; Mazzucato, E; Guttenfelder, W; Bell, R E; Domier, C W; LeBlanc, B P; Lee, K C; Luhmann Jr, N C; Smith, D R

    2011-03-21

    In this letter we report the first clear experimental observation of density gradient stabilization of electron temperature gradient driven turbulence in a fusion plasma. It is observed that longer wavelength modes, k⊥ρs ≤10, are most stabilized by density gradient, and the stabilization is accompanied by about a factor of two decrease in the plasma effective thermal diffusivity.

  1. Particle transport in density gradient driven TE mode turbulence

    CERN Document Server

    Skyman, Andreas; Strand, P I

    2011-01-01

    The turbulent transport of main ion and trace impurities in a tokamak device in the presence of steep electron density gradients has been studied. The parameters are chosen for trapped electron (TE) mode turbulence, driven primarily by steep electron density gradients relevant to H-mode physics, but with a transition to temperature gradient driven turbulence as the density gradient flattens. Results obtained through non-linear (NL) and quasilinear (QL) gyrokinetic simulations using the GENE code are compared with results obtained from a fluid model. Main ion and impurity transport is studied by examining the balance of convective and diffusive transport, as quantified by the density gradient corresponding to zero particle flux (peaking factor). Scalings are obtained for the impurity peaking with the background electron density gradient and the impurity charge number. It is shown that the impurity peaking factor is weakly dependent on impurity charge and significantly smaller than the driving electron density ...

  2. A density gradient theory based method for surface tension calculations

    DEFF Research Database (Denmark)

    Liang, Xiaodong; Michelsen, Michael Locht; Kontogeorgis, Georgios

    2016-01-01

    The density gradient theory has been becoming a widely used framework for calculating surface tension, within which the same equation of state is used for the interface and bulk phases, because it is a theoretically sound, consistent and computationally affordable approach. Based on the observation...... that the optimal density path from the geometric mean density gradient theory passes the saddle point of the tangent plane distance to the bulk phases, we propose to estimate surface tension with an approximate density path profile that goes through this saddle point. The linear density gradient theory, which...... assumes linearly distributed densities between the two bulk phases, has also been investigated. Numerical problems do not occur with these density path profiles. These two approximation methods together with the full density gradient theory have been used to calculate the surface tension of various...

  3. A New Discontinuous Galerkin Method for Convection-Diffusion Problems: The Gradient-Recovery DG Method

    Science.gov (United States)

    Johnson, Philip; Johnsen, Eric

    2016-11-01

    The Discontinuous Galerkin (DG) numerical method, while well-suited for hyperbolic PDE systems such as the Euler equations, is not naturally competitive for convection-diffusion systems, such as the Navier-Stokes equations. Where the DG weak form of the Euler equations depends only on the field variables for calculation of numerical fluxes, the traditional form of the Navier-Stokes equations requires calculation of the gradients of field variables for flux calculations. It is this latter task for which the standard DG discretization is ill-suited, and several approaches have been proposed to treat the issue. The most popular strategy for handling diffusion is the "mixed" approach, where the solution gradient is constructed from the primal as an auxiliary. We designed a new mixed approach, called Gradient-Recovery DG; it uses the Recovery concept of Van Leer & Nomura with the mixed approach to produce a scheme with excellent stability, high accuracy, and unambiguous implementation when compared to typical mixed approach concepts. In addition to describing the scheme, we will perform analysis with comparison to other DG approaches for diffusion. Gas dynamics examples will be presented to demonstrate the scheme's capabilities.

  4. Fire Regime along Latitudinal Gradients of Continuous to Discontinuous Coniferous Boreal Forests in Eastern Canada

    Directory of Open Access Journals (Sweden)

    Jeanne Portier

    2016-09-01

    Full Text Available Fire is the main disturbance in North American coniferous boreal forests. In Northern Quebec, Canada, where forest management is not allowed, the landscape is gradually constituted of more opened lichen woodlands. Those forests are discontinuous and show a low regeneration potential resulting from the cumulative effects of harsh climatic conditions and very short fire intervals. In a climate change context, and because the forest industry is interested in opening new territories to forest management in the north, it is crucial to better understand how and why fire risk varies from the north to the south at the transition between the discontinuous and continuous boreal forest. We used time-since-fire (TSF data from fire archives as well as a broad field campaign in Quebec’s coniferous boreal forests along four north-south transects in order to reconstruct the fire history of the past 150 to 300 years. We performed survival analyses in each transect in order to (1 determine if climate influences the fire risk along the latitudinal gradient; (2 fractionate the transects into different fire risk zones; and (3 quantify the fire cycle—defined as the time required to burn an area equivalent to the size of the study area—of each zone and compare its estimated value with current fire activity. Results suggest that drought conditions are moderately to highly responsible for the increasing fire risk from south to north in the three westernmost transects. No climate influence was observed in the last one, possibly because of its complex physical environment. Fire cycles are shortening from south to north, and from east to west. Limits between high and low fire risk zones are consistent with the limit between discontinuous and continuous forests, established based on recent fire activity. Compared to the last 40 years, fire cycles of the last 150–300 years are shorter. Our results suggest that as drought episodes are expected to become more frequent

  5. Response of a thin airfoil encountering strong density discontinuity

    Energy Technology Data Exchange (ETDEWEB)

    Marble, F.E. [California Inst. of Tech., Pasadena, CA (United States). Karman Lab. of Fluid Mechanics

    1993-12-01

    Airfoil theory for unsteady motion has been developed extensively assuming the undisturbed medium to be of uniform density, a restriction accurate for motion in the atmosphere. In some instances, notably for airfoil comprising fan, compressor and turbine blade rows, the undisturbed medium may carry density variations or ``spots``, resulting from non-uniformities in temperature or composition, of a size comparable to the blade chord. This condition exists for turbine blades, immediately downstream of the main burner of a gas turbine engine where the density fluctuations of the order of 50 percent may occur. Disturbances of a somewhat smaller magnitude arise from the ingestion of hot boundary layers into fans, and exhaust into hovercraft. Because these regions of non-uniform density convect with the moving medium, the airfoil experiences a time varying load and moment which the authors calculate.

  6. DISCONTINUOUS FLOW OF TURBID DENSITY CURRENTS Ⅱ. INTERNAL HYDRAULIC JUMP

    Institute of Scientific and Technical Information of China (English)

    Jiahua FAN

    2005-01-01

    Traveling and stationary internal hydraulic jumps in density currents with positive or negative entrainment coefficients were analyzed based on simple assumptions. An expression of internal hydraulic jumps with entrainment coefficients was derived. Experimental data, published in literature, of stationary internal hydraulic jumps in turbid, thermal and saline density currents including measured values of water entrainment were used to compare with theory. Comparison was also made of traveling internal hydraulic jumps between measured data and theory.

  7. Implications of discontinuous elevation gradients on fragmentation and restoration in patterned wetlands

    Science.gov (United States)

    Zweig, Christa L.; Reichert, Brian E.; Kitchens, Wiley M.

    2011-01-01

    Large wetlands around the world face the possibility of degradation, not only from complete conversion, but also from subtle changes in their structure and function. While fragmentation and isolation of wetlands within heterogeneous landscapes has received much attention, the disruption of spatial patterns/processes within large wetland systems and the resulting fragmentation of community components are less well documented. A greater understanding of pattern/process relationships and landscape gradients, and what occurs when they are altered, could help avoid undesirable consequences of restoration actions. The objective of this study is to determine the amount of fragmentation of sawgrass ridges due to artificial impoundment of water and how that may be differentially affected by spatial position relative to north and south levees. We also introduce groundbreaking evidence of landscape-level discontinuous elevation gradients within WCA3AS by comparing generalized linear and generalized additive models. These relatively abrupt breaks in elevation may have non-linear effects on hydrology and vegetation communities and would be crucial in restoration considerations. Modeling suggests there are abrupt breaks in elevation as a function of northing (Y-coordinate). Fragmentation indices indicate that fragmentation is a function of elevation and easting (X-coordinate), and that fragmentation has increased from 1988-2002. When landscapes change and the changes are compounded by non-linear landscape variables that are described herein, the maintenance processes change with them, creating a degraded feedback loop that alters the system's response to structuring variables and diminishes our ability to predict the effects of restoration projects or climate change. Only when these landscape variables and linkages are clearly defined can we predict the response to potential perturbations and apply the knowledge to other landscape-level wetland systems in need of future

  8. Fundamental gaps with approximate density functionals: The derivative discontinuity revealed from ensemble considerations

    Energy Technology Data Exchange (ETDEWEB)

    Kraisler, Eli; Kronik, Leeor [Department of Materials and Interfaces, Weizmann Institute of Science, Rehovoth 76100 (Israel)

    2014-05-14

    The fundamental gap is a central quantity in the electronic structure of matter. Unfortunately, the fundamental gap is not generally equal to the Kohn-Sham gap of density functional theory (DFT), even in principle. The two gaps differ precisely by the derivative discontinuity, namely, an abrupt change in slope of the exchange-correlation energy as a function of electron number, expected across an integer-electron point. Popular approximate functionals are thought to be devoid of a derivative discontinuity, strongly compromising their performance for prediction of spectroscopic properties. Here we show that, in fact, all exchange-correlation functionals possess a derivative discontinuity, which arises naturally from the application of ensemble considerations within DFT, without any empiricism. This derivative discontinuity can be expressed in closed form using only quantities obtained in the course of a standard DFT calculation of the neutral system. For small, finite systems, addition of this derivative discontinuity indeed results in a greatly improved prediction for the fundamental gap, even when based on the most simple approximate exchange-correlation density functional – the local density approximation (LDA). For solids, the same scheme is exact in principle, but when applied to LDA it results in a vanishing derivative discontinuity correction. This failure is shown to be directly related to the failure of LDA in predicting fundamental gaps from total energy differences in extended systems.

  9. Combination of direct swim-up technique and discontinuous Percoll gradient centrifugation for sperm preparation of oligoasthenozoospermic samples.

    Science.gov (United States)

    Chen, S U; Ho, H N; Chen, H F; Chao, K H; Wu, M Y; Chen, C D; Huang, S C; Lee, T Y; Yang, Y S

    1996-01-01

    Sperm recovery for assisted reproduction in oligoasthenozoospermic patients is not satisfying either by the swim-up technique or by Percoll gradient centrifugation, and no single technique is constantly preferred. The design of this study was to evaluate the effects of combining the two methods on improving the efficacy of sperm preparation in these poor samples. For each semen sample, 1 mL was treated with a combination method, which used direct swim-up technique to recover motile sperm swimming to the supernatant, and then the residual semen was subjected to two-layer discontinuous Percoll gradient procedure for further recovery of motile sperm. Another 1 mL was prepared with two-layer discontinuous Percoll gradient centrifugation alone for comparison. Parameters measured included sperm concentration, number of progressively motile sperm, percentage of progressive motility, percentage of motile sperm recovery, amount of debris, percentage of normal forms according to Kruger's strict criteria, and motion characteristics of sperm using computer-aided motility analysis. The results of 30 oligoasthenozoospermic samples demonstrated that the combination method achieved a significantly greater recovery of motile sperm than the two-layer discontinuous Percoll gradient centrifugation did (43.2 +/- 19.7% vs. 32.2 +/- 14.3%, p method than in those of Percoll gradient centrifugation alone, but the difference was not significant (63.7 +/- 21.8% vs. 58.7 +/- 20.1%). The debris of semen was removed equally well by both methods. The percentage of normal forms as well as motion characteristics, including curvilinear velocity, straight-line velocity, mean amplitude of lateral head displacement, and linearity, were similar in the samples treated by these two procedures. The combination of the direct swim-up technique and discontinuous Percoll gradient centrifugation combines the advantages of each procedure and results in greater recovery of motile sperm in oligoasthenozoospermic

  10. Purification of white spot syndrome virus by iodixanol density gradient centrifugation.

    Science.gov (United States)

    Dantas-Lima, J J; Corteel, M; Cornelissen, M; Bossier, P; Sorgeloos, P; Nauwynck, H J

    2013-10-01

    Up to now, only a few brief procedures for purifying white spot syndrome virus (WSSV) have been described. They were mainly based on sucrose, NaBr and CsCl density gradient centrifugation. This work describes for the first time the purification of WSSV through iodixanol density gradients, using virus isolated from infected tissues and haemolymph of Penaeus vannamei (Boone). The purification from tissues included a concentration step by centrifugation (2.5 h at 60,000 g) onto a 50% iodixanol cushion and a purification step by centrifugation (3 h at 80,000 g) through a discontinuous iodixanol gradient (phosphate-buffered saline, 5%, 10%, 15% and 20%). The purification from infected haemolymph enclosed a dialysis step with a membrane of 1,000 kDa (18 h) and a purification step through the earlier iodixanol gradient. The gradients were collected in fractions and analysed. The number of particles, infectivity titre (in vivo), total protein and viral protein content were evaluated. The purification from infected tissues gave WSSV suspensions with a very high infectivity and an acceptable purity, while virus purified from haemolymph had a high infectivity and a very high purity. Additionally, it was observed that WSSV has an unusually low buoyant density and that it is very sensitive to high external pressures.

  11. Effect of Crustal Density Structures on GOCE Gravity Gradient Observables

    Directory of Open Access Journals (Sweden)

    Robert Tenzer and Pavel Novák

    2013-01-01

    Full Text Available We investigate the gravity gradient components corrected for major known anomalous density structures within the _ crust. Heterogeneous mantle density structures are disregarded. The gravimetric forward modeling technique is utilized to compute the gravity gradients based on methods for a spherical harmonic analysis and synthesis of a gravity field. The _ gravity gradient components are generated using the global geopotential model GOCO-03s. The topographic and stripping gravity corrections due to the density contrasts of the ocean and ice are computed from the global topographic/bathymetric model DTM2006.0 (which also includes the ice-thickness dataset. The discrete data of sediments and crust layers taken from the CRUST2.0 global crustal model are then used to apply the additional stripping corrections for sediments and remaining anomalous crustal density structures. All computations are realized globally on a one arc-deg geographical grid at a mean satellite elevation of 255 km. The global map of the consolidated crust-stripped gravity gradients reveals distinctive features which are attributed to global tectonics, lithospheric plate configuration, lithosphere structure and mantle dynamics (e.g., glacial isostatic adjustment, mantle convection. The Moho signature, which is the most pronounced signal in these refined gravity gradients, is superimposed over a weaker gravity signal of the lithospheric mantle. An interpretational quality of the computed (refined gravity gradient components is mainly limited by a low accuracy and resolution of the CRUST2.0 sediment and crustal layer data and unmodeled mantle structures.

  12. Remark on compressible Navier-Stokes equations with density-dependent viscosity and discontinuous initial data

    Science.gov (United States)

    Zhang, Ting; Fang, Daoyuan

    2008-03-01

    In this paper, we study the free boundary problem for 1D compressible Navier-Stokes equations with density-dependent viscosity. We focus on the case where the viscosity coefficient vanishes on vacuum. We prove the global existence and uniqueness for discontinuous solutions to the Navier-Stokes equations when the initial density is a bounded variation function, and give a decay result for the density as t-->+[infinity].

  13. Separation of colloidal two dimensional materials by density gradient ultracentrifugation

    Energy Technology Data Exchange (ETDEWEB)

    Kuang, Yun; Song, Sha [State Key Laboratory of Chemical Resource Engineering, Beijing University of Chemical Technology, Beijing 100029 (China); Huang, Jinyang, E-mail: huangjy@mail.buct.edu.cn [Department of Mathematics, College of Science, Beijing University of Chemical Technology, Beijing 100029 (China); Sun, Xiaoming, E-mail: sunxm@mail.buct.edu.cn [State Key Laboratory of Chemical Resource Engineering, Beijing University of Chemical Technology, Beijing 100029 (China)

    2015-04-15

    Two-dimensional (2D) materials have been made through various approaches but obtaining monodispersed simply by synthesis optimization gained little success, which highlighted the need for introducing nanoseparation methods. Density gradient ultracentrifugation method has emerged as a versatile and scalable method for sorting colloidal 2D nanomaterials. Isopycnic separation was applied on thickness-dependent separation of graphene nanosheets. And rate-zonal separation, as a more versatile separation method, demonstrated its capability in sorting nanosheets of chemically modified single layered graphene, layered double hydroxide, and even metallic Ag. Establishing such density gradient ultracentrifugation method not only achieves monodispersed nanosheets and provides new opportunities for investigation on size dependent properties of 2D materials, but also makes the surface modification possible by introducing “reaction zones” during sedimentation of the colloids. - Graphical abstract: Two-dimensional (2D) materials have been made through various approaches but obtaining monodispersed simply by synthesis optimization gained little success, which highlighted the need for introducing nanoseparation methods. Density gradient ultracentrifugation method has emerged as a versatile and scalable method for sorting colloidal 2D nanomaterials according to their size of thickness difference. Establishing such density gradient ultracentrifugation method not only achieves monodispersed nanosheets and provides new opportunities for investigation on size dependent properties of 2D materials, but also makes the surface modification possible by introducing “reaction zones” during sedimentation of the colloids. - Highlights: • Density gradient ultracentrifugation was applied on size separation of 2D material. • Isopycnic separation was applied on separation of low density materials. • Rate-zonal separation was applied on separation of large density materials. • Size

  14. Analytical gradients for excitation energies from frozen-density embedding.

    Science.gov (United States)

    Kovyrshin, Arseny; Neugebauer, Johannes

    2016-08-21

    The formulation of analytical excitation-energy gradients from time-dependent density functional theory within the frozen-density embedding framework is presented. In addition to a comprehensive mathematical derivation, we discuss details of the numerical implementation in the Slater-function based Amsterdam Density Functional (ADF) program. Particular emphasis is put on the consistency in the use of approximations for the evaluation of second- and third-order non-additive kinetic-energy and exchange-correlation functional derivatives appearing in the final expression for the excitation-energy gradient. We test the implementation for different chemical systems in which molecular excited-state potential-energy curves are affected by another subsystem. It is demonstrated that the analytical implementation for the evaluation of excitation-energy gradients yields results in close agreement with data from numerical differentiation. In addition, we show that our analytical results are numerically more stable and thus preferable over the numerical ones.

  15. Enhancement of electric and magnetic wave fields at density gradients

    Directory of Open Access Journals (Sweden)

    A. Reiniusson

    2006-03-01

    Full Text Available We use Freja satellite data to investigate irregular small-scale density variations. The observations are made in the auroral region at about 1000-1700 km. The density variations are a few percent, and the structures are found to be spatial down to a scale length of a few ion gyroradii. Irregular density variations are often found in an environment of whistler mode/lower hybrid waves and we show that at the density gradients both the electric and magnetic wave fields are enhanced.

  16. Effect of Crustal Density Structures on GOCE Gravity Gradient Observables

    Directory of Open Access Journals (Sweden)

    Robert Tenzer Pavel Novák

    2013-01-01

    Full Text Available We investigate the gravity gradient components corrected for major known anomalous density structures within the Earth¡¦s crust. Heterogeneous mantle density structures are disregarded. The gravimetric forward modeling technique is utilized to compute the gravity gradients based on methods for a spherical harmonic analysis and synthesis of a gravity field. The Earth¡¦s gravity gradient components are generated using the global geopotential model GOCO-03s. The topographic and stripping gravity corrections due to the density contrasts of the ocean and ice are computed from the global topographic/bathymetric model DTM2006.0 (which also includes the ice-thickness dataset. The discrete data of sediments and crust layers taken from the CRUST2.0 global crustal model are then used to apply the additional stripping corrections for sediments and remaining anomalous crustal density structures. All computations are realized globally on a one arc-deg geographical grid at a mean satellite elevation of 255 km. The global map of the consolidated crust-stripped gravity gradients reveals distinctive features which are attributed to global tectonics, lithospheric plate configuration, lithosphere structure and mantle dynamics (e.g., glacial isostatic adjustment, mantle convection. The Moho signature, which is the most pronounced signal in these refined gravity gradients, is superimposed over a weaker gravity signal of the lithospheric mantle. An interpretational quality of the computed (refined gravity gradient components is mainly limited by a low accuracy and resolution of the CRUST2.0 sediment and crustal layer data and unmodeled mantle structures.

  17. Interacting Eigenmodes of a plasma diode with a density gradient

    Energy Technology Data Exchange (ETDEWEB)

    Loefgren, T.; Gunell, H.

    1997-08-01

    The formation of narrow high frequency electric field spikes in plasma density gradients is investigated using one-dimensional particle in cell simulations. It is found that the shape of the plasma density gradient is very important for the spike formation. The spike appears also in simulations with immobile ions showing that a coupling to the ion motion, as for example in wave interactions, is not necessary for the formation of HF spikes. However, the HF spike influences the ion motion, and ion waves are seen in the simulations. It has been found, in experiments and simulations, that the electron velocity distribution function deviates from the Maxwellian distribution. Dispersion relations are calculated using realistic distribution functions. The spike can be seen as a coupled system of two Eigenmodes of a plasma diode fed by the beam-plasma interaction. Based on a simplified fluid description of such Eigenmodes, explanations for the localization of the spike, spatially and in frequency, are given. The density amplitude is comparable with the DC density level close to the cathode. Space charge limits of waves in this region seem to determine the amplitude of the spike through the Poisson`s equation. 12 refs, 19 figs.

  18. The density gradient effect on quantum Weibel instability

    Energy Technology Data Exchange (ETDEWEB)

    Mahdavi, M., E-mail: m.mahdavi@umz.ac.ir; Khodadadi Azadboni, F., E-mail: f.khodadadi@stu.umz.ac.ir [Physics Department, University of Mazandaran, P. O. Box 47415-416, Babolsar (Iran, Islamic Republic of)

    2015-03-15

    The Weibel instability plays an important role in stopping the hot electrons and energy deposition mechanism in the fast ignition of inertial fusion process. In this paper, the effects of the density gradient and degeneracy on Weibel instability growth rate are investigated. Calculations show that decreasing the density degenerate in the plasma corona, near the relativistic electron beam emitting region by 8.5% leads to a 92% reduction in the degeneracy parameter and about 90% reduction in Weibel instability growth rate. Also, decreasing the degenerate density near the fuel core by 8.5% leads to 1% reduction in the degeneracy parameter and about 8.5% reduction in Weibel instability growth rate. The Weibel instability growth rate shrinks to zero and the deposition condition of relativistic electron beam energy can be shifted to the fuel core for a suitable ignition by increasing the degeneracy parameter in the first layer of plasma corona.

  19. Bow-shock pulsar-wind nebulae passing through density discontinuities

    Science.gov (United States)

    Yoon, Doosoo; Heinz, Sebastian

    2017-01-01

    Bow-shock pulsar-wind nebulae are a subset of pulsar-wind nebulae that form when the pulsar has high velocity due to the natal kick during the supernova explosion. The interaction between the relativistic wind from the fast-moving pulsar and the interstellar medium produces a bow-shock and a trail, which are detectable in Hα emission. Among such bow-shock pulsar-wind nebulae, the Guitar Nebula stands out for its peculiar morphology, which consists of a prominent bow-shock head and a series of bubbles further behind. We present a scenario in which multiple bubbles can be produced when the pulsar encounters a series of density discontinuities in the ISM. We tested the scenario using 2D and 3D hydrodynamic simulations. The shape of the Guitar Nebula can be reproduced if the pulsar traversed a region of declining low density. We also show that if a pulsar encounters an inclined density discontinuity, it produces an asymmetric bow-shock head, consistent with observations of the bow-shock of the millisecond pulsar J2124-3358.

  20. Mineral density volume gradients in normal and diseased human tissues.

    Directory of Open Access Journals (Sweden)

    Sabra I Djomehri

    Full Text Available Clinical computed tomography provides a single mineral density (MD value for heterogeneous calcified tissues containing early and late stage pathologic formations. The novel aspect of this study is that, it extends current quantitative methods of mapping mineral density gradients to three dimensions, discretizes early and late mineralized stages, identifies elemental distribution in discretized volumes, and correlates measured MD with respective calcium (Ca to phosphorus (P and Ca to zinc (Zn elemental ratios. To accomplish this, MD variations identified using polychromatic radiation from a high resolution micro-computed tomography (micro-CT benchtop unit were correlated with elemental mapping obtained from a microprobe X-ray fluorescence (XRF using synchrotron monochromatic radiation. Digital segmentation of tomograms from normal and diseased tissues (N=5 per group; 40-60 year old males contained significant mineral density variations (enamel: 2820-3095 mg/cc, bone: 570-1415 mg/cc, cementum: 1240-1340 mg/cc, dentin: 1480-1590 mg/cc, cementum affected by periodontitis: 1100-1220 mg/cc, hypomineralized carious dentin: 345-1450 mg/cc, hypermineralized carious dentin: 1815-2740 mg/cc, and dental calculus: 1290-1770 mg/cc. A plausible linear correlation between segmented MD volumes and elemental ratios within these volumes was established, and Ca/P ratios for dentin (1.49, hypomineralized dentin (0.32-0.46, cementum (1.51, and bone (1.68 were observed. Furthermore, varying Ca/Zn ratios were distinguished in adapted compared to normal tissues, such as in bone (855-2765 and in cementum (595-990, highlighting Zn as an influential element in prompting observed adaptive properties. Hence, results provide insights on mineral density gradients with elemental concentrations and elemental footprints that in turn could aid in elucidating mechanistic processes for pathologic formations.

  1. Moho Density Contrast in Central Eurasia from GOCE Gravity Gradients

    Directory of Open Access Journals (Sweden)

    Mehdi Eshagh

    2016-05-01

    Full Text Available Seismic data are primarily used in studies of the Earth’s inner structure. Since large parts of the world are not yet sufficiently covered by seismic surveys, products from the Earth’s satellite observation systems have more often been used for this purpose in recent years. In this study we use the gravity-gradient data derived from the Gravity field and steady-state Ocean Circulation Explorer (GOCE, the elevation data from the Shuttle Radar Topography Mission (SRTM and other global datasets to determine the Moho density contrast at the study area which comprises most of the Eurasian plate (including parts of surrounding continental and oceanic tectonic plates. A regional Moho recovery is realized by solving the Vening Meinesz-Moritz’s (VMM inverse problem of isostasy and a seismic crustal model is applied to constrain the gravimetric solution. Our results reveal that the Moho density contrast reaches minima along the mid-oceanic rift zones and maxima under the continental crust. This spatial pattern closely agrees with that seen in the CRUST1.0 seismic crustal model as well as in the KTH1.0 gravimetric-seismic Moho model. However, these results differ considerably from some previously published gravimetric studies. In particular, we demonstrate that there is no significant spatial correlation between the Moho density contrast and Moho deepening under major orogens of Himalaya and Tibet. In fact, the Moho density contrast under most of the continental crustal structure is typically much more uniform.

  2. Permafrost and organic layer interactions over a climate gradient in a discontinuous permafrost zone

    Science.gov (United States)

    Johnson, Kristofer D.; Harden, Jennifer W.; McGuire, A. David; Clark, Mark; Yuan, Fengming; Finley, Andrew O.

    2013-01-01

    Permafrost is tightly coupled to the organic soil layer, an interaction that mediates permafrost degradation in response to regional warming. We analyzed changes in permafrost occurrence and organic layer thickness (OLT) using more than 3000 soil pedons across a mean annual temperature (MAT) gradient. Cause and effect relationships between permafrost probability (PF), OLT, and other topographic factors were investigated using structural equation modeling in a multi-group analysis. Groups were defined by slope, soil texture type, and shallow (<28 cm) versus deep organic (≥28 cm) layers. The probability of observing permafrost sharply increased by 0.32 for every 10-cm OLT increase in shallow OLT soils (OLTs) due to an insulation effect, but PF decreased in deep OLT soils (OLTd) by 0.06 for every 10-cm increase. Across the MAT gradient, PF in sandy soils varied little, but PF in loamy and silty soils decreased substantially from cooler to warmer temperatures. The change in OLT was more heterogeneous across soil texture types—in some there was no change while in others OLTs soils thinned and/or OLTd soils thickened at warmer locations. Furthermore, when soil organic carbon was estimated using a relationship with thickness, the average increase in carbon in OLTd soils was almost four times greater compared to the average decrease in carbon in OLTs soils across all soil types. If soils follow a trajectory of warming that mimics the spatial gradients found today, then heterogeneities of permafrost degradation and organic layer thinning and thickening should be considered in the regional carbon balance.

  3. Permafrost and organic layer interactions over a climate gradient in a discontinuous permafrost zone

    Energy Technology Data Exchange (ETDEWEB)

    Johnson, Kristopher D [University of Alaska, Fairbanks; Harden, Jennifer [United States Geological Service (USGS), Menlo Park; McGuire, A. David [University of Alaska; Clark, Mark [United Stated Department of Agriculture (USDA), Natural Resources Conservation Service; Yuan, Fengming [ORNL; Finley, Andrew [Michigan State University, East Lansing

    2013-01-01

    Permafrost is tightly coupled to the organic layer, an interaction that mediates permafrost degradation in response to regional warming. We analyzed changes in permafrost occurrence (PF) and organic layer thickness (OLT) in more than 3000 soil pedons across a mean annual temperature (MAT) gradient. Cause and effect relationships between PF, OLT, and other topographic factors were investigated using structural equation modeling in a multi-group analysis. Groups were defined by slope, soil texture type, and shallow v. deep organic layers. Permafrost probability sharply increased by 0.32 for every 10-cm OLT increase in shallow OLT soils (OLTs) due to an insulation effect, but PF decreased in deep OLT soils (OLTd) by 0.06 for every 10-cm increase. As temperature warmed, sandy soils varied little in PF or OLT, but PF in loamy and sandy soils decreased substantially. The change in OLT was more heterogeneous across soil types in some there was no change while in others OLTs soils thinned and/or OLTd soils thickened as temperature warmed. Furthermore, the rate of thickening with warming for OLTd soils was on average almost 4 times greater than the rate of thinning for OLTs soils across all soil types. If soils follow a trajectory of warming that mimics the spatial gradients found today, then heterogeneities of permafrost degradation and organic layer thinning and thickening should be considered in the regional carbon balance.

  4. Stable smoothed particle magnetohydrodynamics in very steep density gradients

    CERN Document Server

    Lewis, Benjamin T; Monaghan, Joseph J; Price, Daniel J

    2015-01-01

    The equations of smoothed particle magnetohydrodynamics (SPMHD), even with the various corrections to instabilities so far proposed, have been observed to be unstable when a very steep density gradient is necessarily combined with a variable smoothing length formalism. Here we consider in more detail the modifications made to the SPMHD equations in LBP2015 that resolve this instability by replacing the smoothing length in the induction and anisotropic force equations with an average smoothing length term. We then explore the choice of average used and compare the effects on a test `cylinder-in-a-box' problem and the collapse of a magnetised molecular cloud core. We find that, aside from some benign numerical effects at low resolutions for the quadratic mean, the formalism is robust as to the choice of average but that in complicated models it is essential to apply the average to both equations; in particular, all four averages considered exhibit similar conservation properties. This improved formalism allows ...

  5. Bull Fertility and Its Relation with Density Gradient Selected Sperm

    Directory of Open Access Journals (Sweden)

    Allouche Lynda ,

    2017-01-01

    Full Text Available Background Sperm selection method is usually used to collect these cells for in vitro-assisted reproduction. Few studies reported the relationship of in vivo fertility and semen parameters after sperm selection; hence, the present study attempted to assess different semen parameters after post-thaw or sperm selection, using density gradient separation BoviPure®, to predict in vivo fertility. Materials and Methods In this experimental study, frozen semen quality of four Montbeliarde bulls were assessed after post-thaw (PT or after sperm selection (SSp, using density gradient separation BoviPure®, to predict the fertility rate in vivo. In addition to PT or SSp, semen was examined for concentration, motility, morphology abnormalities, viability, acrosome and plasma membrane integrities. Fertility was measured as non-return rates within 56 days after the first insemination (NRR or as corrected NRR, expressed as CNRR, to the factors influencing fertility using linear mixed model. Non-parametric Kruskal-Wallis test was performed to compare semen parameter variables. Fertility rates were compared using Chi-square test. Pearson correlation analysis was used to test the relationship between CNRR and semen parameters. Data was analysed using SPSS package program, version 21.0. Results Most of the examined bulls exhibited a high fertility rate (3/4 bulls, 62.1- 81.8% for NRR or 67.2-98.5% for CNRR. Fertility rate, expressed as CNRR, was significantly related to semen parameters after SSp, but not after PT. Thus, CNRR was increased with decrease of total motility, progressive spermatozoa and abaxial implantation frequencies after SSp (r=-0.999, P=0.001; r=-0.990, P=0.010; r=-0.988, P= 0.012, respectively; while, CNRR was decreased with decrease of SSp immotile spermatozoa (r=+0.995, P=0.005, underlying that maximal limit of determined immotile spermatozoa is 47%. Conclusion High frequencies of total and progressive motility spermatozoa, and abaxial

  6. First Birth after Sperm Selection through Discontinuous Gradient Centrifugation and Artificial Insemination from a Chromosomal Translocation Carrier

    Directory of Open Access Journals (Sweden)

    Alexandre Rouen

    2014-01-01

    Full Text Available Introduction. Balanced chromosomal carriers, though usually healthy, are confronted with recurrent spontaneous abortions and malformations in the offspring. Those are related to the transmission of an abnormal, chromosomally unbalanced genotype. We evidenced that the proportion of unbalanced spermatozoa can be significantly decreased through a sperm preparation process called discontinuous gradient centrifugation (DGC. We therefore started offering intrauterine inseminations with this procedure to couples with a male translocation carriers. Case Presentation. We report the case of a 37-year-old man carrying a t(3;10(q25;p13 reciprocal translocation. He and his partner had had trouble conceiving for ten years and had four spontaneous abortions. DGC in this patient decreased the proportion of unbalanced spermatozoa from 63.6% to 52.3%. They were therefore offered intrauterine insemination with DGC, which eventually led to the birth of a healthy female child carrying the paternal translocation. Conclusion. We showed that translocation carriers could be offered intrauterine inseminations with DGC. Before this, the only two options were natural conception with prenatal diagnosis and termination of chromosomally unbalanced fetuses or preimplantation genetic diagnosis, which is a much heavier and costly procedure. We are currently offering this option through a multicentric program in France, and this is the first birth originating from it.

  7. Gram-scale fractionation of nanodiamonds by density gradient ultracentrifugation

    Science.gov (United States)

    Peng, Wei; Mahfouz, Remi; Pan, Jun; Hou, Yuanfang; Beaujuge, Pierre M.; Bakr, Osman M.

    2013-05-01

    Size is a defining characteristic of nanoparticles; it influences their optical and electronic properties as well as their interactions with molecules and macromolecules. Producing nanoparticles with narrow size distributions remains one of the main challenges to their utilization. At this time, the number of practical approaches to optimize the size distribution of nanoparticles in many interesting materials systems, including diamond nanocrystals, remains limited. Diamond nanocrystals synthesized by detonation protocols - so-called detonation nanodiamonds (DNDs) - are promising systems for drug delivery, photonics, and composites. DNDs are composed of primary particles with diameters mainly Applications requiring DNDs with specific particle or aggregate sizes are now within reach.Size is a defining characteristic of nanoparticles; it influences their optical and electronic properties as well as their interactions with molecules and macromolecules. Producing nanoparticles with narrow size distributions remains one of the main challenges to their utilization. At this time, the number of practical approaches to optimize the size distribution of nanoparticles in many interesting materials systems, including diamond nanocrystals, remains limited. Diamond nanocrystals synthesized by detonation protocols - so-called detonation nanodiamonds (DNDs) - are promising systems for drug delivery, photonics, and composites. DNDs are composed of primary particles with diameters mainly Applications requiring DNDs with specific particle or aggregate sizes are now within reach. Electronic supplementary information (ESI) available: Discussion of the influence of sample solution concentrations on DLS measurements, comparisons of the size distributions of our raw milled particles and NanoAmando particles, a detailed description of the RZDGU procedure, discussion of the influences of the gradients and centrifugation times on fractionation, TEM images, zeta potentials, AUC analysis and

  8. Gram-scale fractionation of nanodiamonds by density gradient ultracentrifugation

    KAUST Repository

    Peng, Wei

    2013-01-01

    Size is a defining characteristic of nanoparticles; it influences their optical and electronic properties as well as their interactions with molecules and macromolecules. Producing nanoparticles with narrow size distributions remains one of the main challenges to their utilization. At this time, the number of practical approaches to optimize the size distribution of nanoparticles in many interesting materials systems, including diamond nanocrystals, remains limited. Diamond nanocrystals synthesized by detonation protocols-so-called detonation nanodiamonds (DNDs)-are promising systems for drug delivery, photonics, and composites. DNDs are composed of primary particles with diameters mainly <10 nm and their aggregates (ca. 10-500 nm). Here, we introduce a large-scale approach to rate-zonal density gradient ultracentrifugation to obtain monodispersed fractions of nanoparticles in high yields. We use this method to fractionate a highly concentrated and stable aqueous solution of DNDs and to investigate the size distribution of various fractions by dynamic light scattering, analytical ultracentrifugation, transmission electron microscopy and powder X-ray diffraction. This fractionation method enabled us to separate gram-scale amounts of DNDs into several size ranges within a relatively short period of time. In addition, the high product yields obtained for each fraction allowed us to apply the fractionation method iteratively to a particular size range of particles and to collect various fractions of highly monodispersed primary particles. Our method paves the way for in-depth studies of the physical and optical properties, growth, and aggregation mechanism of DNDs. Applications requiring DNDs with specific particle or aggregate sizes are now within reach. © 2013 The Royal Society of Chemistry.

  9. Faranoff-Riley type I jet deceleration at density discontinuities Relativistic hydrodynamics with a realistic equation of state

    NARCIS (Netherlands)

    Meliani, Z.; Keppens, R.; Giacomazzo, B.

    2008-01-01

    Aims. We propose a model that could explain the sudden jet deceleration in active galactic nuclei, thereby invoking density discontinuities. Motivated particularly by recent indications from HYbrid MOrphology Radio Sources (HYMORS) that Fanaroff-Riley classification is induced in some cases by varia

  10. Faranoff-Riley type I jet deceleration at density discontinuities Relativistic hydrodynamics with a realistic equation of state

    NARCIS (Netherlands)

    Meliani, Z.; Keppens, R.; Giacomazzo, B.

    2008-01-01

    Aims. We propose a model that could explain the sudden jet deceleration in active galactic nuclei, thereby invoking density discontinuities. Motivated particularly by recent indications from HYbrid MOrphology Radio Sources (HYMORS) that Fanaroff-Riley classification is induced in some cases by

  11. Calculate Electric Field Gradient of TiO2 Within Density Functional Theory

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    <正>TiO2 electric field gradient has been calculated utilizing WIEN2K program, which is ab initio based on density function theory (DFT). DFT uses the charge density as a variable instead of electronic wave

  12. Modeling the convective stability of CO2 sequestration by a discontinuous and unstably stratified density profile

    Science.gov (United States)

    Wanstall, Taber; Hadji, Layachi

    2016-11-01

    The convective stability associated with carbon sequestration is modeled by adopting an unstably stratified basic profile having a step function density with top heavy carbon saturated layer overlying a lighter carbon free layer. The model takes into account the anisotropy in both permeability and carbon dioxide diffusion, and chemical reactions between the CO2 rich brine and host mineralogy. We carry out a linear stability analysis to derive the instability threshold parameters for a variety of CO2 boundary conditions. We solve for the minimum thickness of the carbon-rich layer at which convection sets in and quantify how its value is influenced by diffusion, anisotropy, permeability, reaction and type of boundary conditions. The discontinuity leads to convective concentration contours that have the shape of an asymmetric lens which we quantify by deriving and making use of the CO2 flux expressions at the interface. The linear problem is extended to the nonlinear regime, the analysis of which leads to the determination of a uniformly valid super critical steady solution.

  13. Faranoff-Riley type I jet deceleration at density discontinuities "Relativistic hydrodynamics with realistic equation of state"

    OpenAIRE

    Meliani, Z.; Keppens, R.; Giacomazzo, B.

    2008-01-01

    We propose a model that could explain the sudden jet deceleration in active galactic nuclei, thereby invoking density discontinuities. Motivated particularly by recent indications from HYbrid MOrphology Radio Sources (HYMORS) that Fanaroff-Riley classification is induced in some cases by variations in the density of the external medium. We explore how one-sided jet deceleration and a transition to FR I type can occur in HYMORS, which start as FR II (and remain so on the other side). Methods. ...

  14. Planar gradient coil design by scaling the spatial frequencies of minimum-inductance current density.

    Science.gov (United States)

    Lee, S Y; Park, B S; Yi, J H; Yi, W

    1997-11-01

    Gradient coil inductance has been remarkably reduced by the minimum-inductance design technique, which minimizes the magnetic energy stored by the gradient coil. The planar gradient coil designed by this technique, however, often has poor magnetic field linearity. Scaling the spatial frequencies of the current density function derived by this method, the magnetic field linearity of the planar gradient coil can be greatly improved with a small sacrifice of gradient coil inductance. A figure of merit of the planar gradient coil has been found to be improved by scaling the spatial frequencies.

  15. A rapid and scalable density gradient purification method for Plasmodium sporozoites

    Directory of Open Access Journals (Sweden)

    Kennedy Mark

    2012-12-01

    Full Text Available Abstract Background Malaria remains a major human health problem, with no licensed vaccine currently available. Malaria infections initiate when infectious Plasmodium sporozoites are transmitted by Anopheline mosquitoes during their blood meal. Investigations of the malaria sporozoite are, therefore, of clear medical importance. However, sporozoites can only be produced in and isolated from mosquitoes, and their isolation results in large amounts of accompanying mosquito debris and contaminating microbes. Methods Here is described a discontinuous density gradient purification method for Plasmodium sporozoites that maintains parasite infectivity in vitro and in vivo and greatly reduces mosquito and microbial contaminants. Results This method provides clear advantages over previous approaches: it is rapid, requires no serum components, and can be scaled to purify >107 sporozoites with minimal operator involvement. Moreover, it can be effectively applied to both human (Plasmodium falciparum, Plasmodium vivax and rodent (Plasmodium yoelii infective species with excellent recovery rates. Conclusions This novel method effectively purifies viable malaria sporozoites by greatly reducing contaminating mosquito debris and microbial burdens associated with parasite isolation. Large-scale preparations of purified sporozoites will allow for enhanced in vitro infections, proteomics, and biochemical characterizations. In conjunction with aseptic mosquito rearing techniques, this purification technique will also support production of live attenuated sporozoites for vaccination.

  16. Discontinuous Galerkin finite element method for solving population density functions of cortical pyramidal and thalamic neuronal populations.

    Science.gov (United States)

    Huang, Chih-Hsu; Lin, Chou-Ching K; Ju, Ming-Shaung

    2015-02-01

    Compared with the Monte Carlo method, the population density method is efficient for modeling collective dynamics of neuronal populations in human brain. In this method, a population density function describes the probabilistic distribution of states of all neurons in the population and it is governed by a hyperbolic partial differential equation. In the past, the problem was mainly solved by using the finite difference method. In a previous study, a continuous Galerkin finite element method was found better than the finite difference method for solving the hyperbolic partial differential equation; however, the population density function often has discontinuity and both methods suffer from a numerical stability problem. The goal of this study is to improve the numerical stability of the solution using discontinuous Galerkin finite element method. To test the performance of the new approach, interaction of a population of cortical pyramidal neurons and a population of thalamic neurons was simulated. The numerical results showed good agreement between results of discontinuous Galerkin finite element and Monte Carlo methods. The convergence and accuracy of the solutions are excellent. The numerical stability problem could be resolved using the discontinuous Galerkin finite element method which has total-variation-diminishing property. The efficient approach will be employed to simulate the electroencephalogram or dynamics of thalamocortical network which involves three populations, namely, thalamic reticular neurons, thalamocortical neurons and cortical pyramidal neurons.

  17. A numerical study on charged-particle scattering and radiography of a steep density gradient

    Science.gov (United States)

    Shao, Guangchao; Wang, Xiaofang

    2016-09-01

    Electron and proton radiography of polystyrene planar targets with different density gradients is studied by Monte Carlo simulations in a regime that the incident charged-particle's kinetic energy is much higher than its energy loss in the targets. It is shown that by scattering of the electrons or protons, the density gradient causes modulations of the charged-particle beam transmitted from the target and the modulation contrast is sensitive only to a steep gradient, which suggests a novel diagnostic method wherein a steep density gradient could be distinguished from the scattering of a charged-particle beam in radiography. By using a 100-MeV charged-particle beam, it is found that the modulation is evident for a steep density gradient of width smaller than 1 μm for electron radiography and 0.6 μm for proton radiography, respectively, but almost negligible when the density gradient width is greater than 1 μm. The feasibility of diagnosing the steep density gradients in compressed matter is confirmed by the simulations of radiographing a laser-ablated planar foil. Simulations also show that it is possible to diagnose the density gradients inside a multilayered spherical capsule.

  18. Stabilization of electron-scale turbulence by electron density gradient in national spherical torus experiment

    Energy Technology Data Exchange (ETDEWEB)

    Ruiz Ruiz, J.; White, A. E. [MIT-Plasma Science and Fusion Center, Cambridge, Massachusetts 02139 (United States); Ren, Y.; Guttenfelder, W.; Kaye, S. M.; Leblanc, B. P.; Mazzucato, E. [Princeton Plasma Physics Laboratory, Princeton, New Jersey 08543 (United States); Lee, K. C. [National Fusion Research Institute, Daejeon (Korea, Republic of); Domier, C. W. [University of California at Davis, Davis, California 95616 (United States); Smith, D. R. [University of Wisconsin-Madison, Madison, Wisconsin 53706 (United States); Yuh, H. [Nova Photonics, Inc., Princeton, New Jersey 08540 (United States)

    2015-12-15

    Theory and experiments have shown that electron temperature gradient (ETG) turbulence on the electron gyro-scale, k{sub ⊥}ρ{sub e} ≲ 1, can be responsible for anomalous electron thermal transport in NSTX. Electron scale (high-k) turbulence is diagnosed in NSTX with a high-k microwave scattering system [D. R. Smith et al., Rev. Sci. Instrum. 79, 123501 (2008)]. Here we report on stabilization effects of the electron density gradient on electron-scale density fluctuations in a set of neutral beam injection heated H-mode plasmas. We found that the absence of high-k density fluctuations from measurements is correlated with large equilibrium density gradient, which is shown to be consistent with linear stabilization of ETG modes due to the density gradient using the analytical ETG linear threshold in F. Jenko et al. [Phys. Plasmas 8, 4096 (2001)] and linear gyrokinetic simulations with GS2 [M. Kotschenreuther et al., Comput. Phys. Commun. 88, 128 (1995)]. We also found that the observed power of electron-scale turbulence (when it exists) is anti-correlated with the equilibrium density gradient, suggesting density gradient as a nonlinear stabilizing mechanism. Higher density gradients give rise to lower values of the plasma frame frequency, calculated based on the Doppler shift of the measured density fluctuations. Linear gyrokinetic simulations show that higher values of the electron density gradient reduce the value of the real frequency, in agreement with experimental observation. Nonlinear electron-scale gyrokinetic simulations show that high electron density gradient reduces electron heat flux and stiffness, and increases the ETG nonlinear threshold, consistent with experimental observations.

  19. The causal relation between turbulent particle flux and density gradient

    Energy Technology Data Exchange (ETDEWEB)

    Milligen, B. Ph. van; Martín de Aguilera, A.; Hidalgo, C. [CIEMAT - Laboratorio Nacional de Fusión, Avda. Complutense 40, 28040 Madrid (Spain); Carreras, B. A. [BACV Solutions, 110 Mohawk Road, Oak Ridge, Tennessee 37830 (United States); García, L.; Nicolau, J. H. [Universidad Carlos III, 28911 Leganés, Madrid (Spain)

    2016-07-15

    A technique for detecting the causal relationship between fluctuating signals is used to investigate the relation between flux and gradient in fusion plasmas. Both a resistive pressure gradient driven turbulence model and experimental Langmuir probe data from the TJ-II stellarator are studied. It is found that the maximum influence occurs at a finite time lag (non-instantaneous response) and that quasi-periodicities exist. Furthermore, the model results show very long range radial influences, extending over most of the investigated regions, possibly related to coupling effects associated with plasma self-organization. These results clearly show that transport in fusion plasmas is not local and instantaneous, as is sometimes assumed.

  20. Direct numerical simulations of particle-laden density currents with adaptive, discontinuous finite elements

    Directory of Open Access Journals (Sweden)

    S. D. Parkinson

    2014-05-01

    Full Text Available High resolution direct numerical simulations (DNS are an important tool for the detailed analysis of turbidity current dynamics. Models that resolve the vertical structure and turbulence of the flow are typically based upon the Navier–Stokes equations. Two-dimensional simulations are known to produce unrealistic cohesive vortices that are not representative of the real three-dimensional physics. The effect of this phenomena is particularly apparent in the later stages of flow propagation. The ideal solution to this problem is to run the simulation in three dimensions but this is computationally expensive. This paper presents a novel finite-element (FE DNS turbidity current model that has been built within Fluidity, an open source, general purpose, computational fluid dynamics code. The model is validated through re-creation of a lock release density current at a Grashof number of 5 × 106 in two, and three-dimensions. Validation of the model considers the flow energy budget, sedimentation rate, head speed, wall normal velocity profiles and the final deposit. Conservation of energy in particular is found to be a good metric for measuring mesh performance in capturing the range of dynamics. FE models scale well over many thousands of processors and do not impose restrictions on domain shape, but they are computationally expensive. Use of discontinuous discretisations and adaptive unstructured meshing technologies, which reduce the required element count by approximately two orders of magnitude, results in high resolution DNS models of turbidity currents at a fraction of the cost of traditional FE models. The benefits of this technique will enable simulation of turbidity currents in complex and large domains where DNS modelling was previously unachievable.

  1. Prediction of the derivative discontinuity in density functional theory from an electrostatic description of the exchange and correlation potential

    CERN Document Server

    Andrade, Xavier

    2011-01-01

    We propose a new approach to approximate the exchange and correlation (XC) functional in density functional theory. The XC potential is considered as an electrostatic potential, generated by a fictitious XC density, which is in turn a functional of the electronic density. We apply the approach to develop a correction scheme that fixes the asymptotic behavior of any approximated XC potential for finite systems. Additionally, the correction procedure gives the value of the derivative discontinuity; therefore it can directly predict the fundamental gap as a ground-state property.

  2. Density gradient centrifugation in urografin of Moraxella and Kingella cells and appendages.

    Science.gov (United States)

    Frøholm, L O; Bøvre, K

    1978-04-01

    Purification of fimbriae (pili) by density gradient banding in Urografin medium was attempted. Moraxella nonliquefaciens and Kingella kingae fimbriae were of higher density than their cells of origin, but fimbrial fractions obtained by homogenization and differential centrifugation still banded together with presumed outer membrane fragments and some whole cells in Urografin gradients. The cellular density of genetic variants with different fimbriation/competence levels was also studied. For one strain of M. nonliquefaciens and two strains of K. kingae, cells harvested from agar plates tended to show several bands on isopycnic density gradient centrifugation, with slightly higher general density of fimbriated variants than non-fimbriated. A single density band could be observed with cells from log phase broth cultures of selected strains which showed no distinct difference between fimbriation or competence variants of each strain. Cells of M. nonliquefaciens and M. bovis showed comparable buoyant densities, whereas those of K. kingae had a higher density.

  3. Cell Growth on ("Janus") Density Gradients of Bifunctional Zeolite L Crystals.

    Science.gov (United States)

    Kehr, Nermin Seda; Motealleh, Andisheh; Schäfer, Andreas H

    2016-12-28

    Nanoparticle density gradients on surfaces have attracted interest as two-dimensional material surfaces that can mimic the complex nano-/microstructure of the native extracellular matrix, including its chemical and physical gradients, and can therefore be used to systematically study cell-material interactions. In this respect, we report the preparation of density gradients made of bifunctional zeolite L crystals on glass surfaces and the effects of the density gradient and biopolymer functionalization of zeolite L crystals on cell adhesion. We also describe how we created "Janus" density gradient surfaces by gradually depositing two different types of zeolite L crystals that were functionalized and loaded with different chemical groups and guest molecules onto the two distinct sides of the same glass substrate. Our results show that more cells adhered on the density gradient of biopolymer-coated zeolites than on uncoated ones. The number of adhered cells increased up to a certain surface coverage of the glass by the zeolite L crystals, but then it decreased beyond the zeolite density at which a higher surface coverage decreased fibroblast cell adhesion and spreading. Additionally, cell experiments showed that cells gradually internalized the guest-molecule-loaded zeolite L crystals from the underlying density gradient containing bifunctional zeolite L crystals.

  4. BMP4 density gradient in disk-shaped confinement

    Science.gov (United States)

    Bozorgui, Behnaz; Teimouri, Hamid; Kolomeisky, Anatoly B.

    We present a quantitative model that explains the scaling of BMP4 gradients during gastrulation and the recent experimental observation that geometric confinement of human embryonic stem cells is sufficient to recapitulate much of germ layer patterning. Based on a assumption that BMP4 diffusion rate is much smaller than the diffusion rate of it's inhibitor molecules, our results confirm that the length-scale which defines germ layer territories does not depend on system size.

  5. Density-gradient-assisted centrifugal microfluidics: an approach to continuous-mode particle separation.

    Science.gov (United States)

    Ukita, Yoshiaki; Oguro, Takayuki; Takamura, Yuzuru

    2017-06-01

    Centrifugal microfluidics has been recognized as a promising pumping method in microfluidics because of its simplicity, easiness of automation, and parallel processing. However, the patterning of stripe flow in centrifugal microfluidics is challenging because a fluid is significantly affected by the Coriolis force, which produces an intrinsic secondary flow. This paper reports a technical and design strategy for centrifugal microfluidics called "density-gradient-assisted centrifugal microfluidics." The flow behavior is observed with the presence of a density gradient and without a density gradient in two concentrically traveling phase flows. As a result, clear stripe flow pattern is observed with a density difference of 0.05 g/cm(3) between water and a percoll solution at a flow rate of 11.8 μl/s (7 ml/10 min) and spinning speed of 3000 rpm. In contrast, without a density gradient, it is necessary to reduce the flow rate and spinning speed to 0.1 μl/s and 1000 rpm, respectively. This paper also presents the use of a density gradient to assist in focusing resin (polystyrene) particles on the boundary of a stripe flow pattern that consists of water and percoll with different densities. Moreover, the density-based separation and sorting of particles in a mixed particle suspension is demonstrated. Polystyrene is selectively focused on the boundary, but silica particles are separated from the focused trajectory due to a difference in density. The separated particles are continuously sorted into different reservoirs with polystyrene and silica separation efficiencies of 96.5% and 98.5%, respectively. The pumping, stripe flow pattern formation, particle concentration, and sorting are simultaneously realized by applying a density gradient and centrifugal force. Therefore, this principle can realize a very simple technique for label-free particle separation by just spinning a disk device and can be applied in other applications by the use of the density-gradient

  6. Integration of the Density Gradient Model into a General Purpose Device Simulator

    Directory of Open Access Journals (Sweden)

    Andreas Wettstein

    2002-01-01

    Full Text Available A generalized Density Gradient model has been implemented into the device simulator Dessis [DESSIS 7.0 reference manual (2001. ISE Integrated Systems Engineering AG, Balgriststrasse 102, CH-8008 Zürich].We describe the multidimensional discretization scheme used and discuss our modifications to the standard Density Gradient model. The evaluation of the model shows good agreement to results obtained by the Schro¨dinger equation.

  7. Density functional theory for molecular and periodic systems using density fitting and continuous fast multipole method: Analytical gradients.

    Science.gov (United States)

    Łazarski, Roman; Burow, Asbjörn Manfred; Grajciar, Lukáš; Sierka, Marek

    2016-10-30

    A full implementation of analytical energy gradients for molecular and periodic systems is reported in the TURBOMOLE program package within the framework of Kohn-Sham density functional theory using Gaussian-type orbitals as basis functions. Its key component is a combination of density fitting (DF) approximation and continuous fast multipole method (CFMM) that allows for an efficient calculation of the Coulomb energy gradient. For exchange-correlation part the hierarchical numerical integration scheme (Burow and Sierka, Journal of Chemical Theory and Computation 2011, 7, 3097) is extended to energy gradients. Computational efficiency and asymptotic O(N) scaling behavior of the implementation is demonstrated for various molecular and periodic model systems, with the largest unit cell of hematite containing 640 atoms and 19,072 basis functions. The overall computational effort of energy gradient is comparable to that of the Kohn-Sham matrix formation. © 2016 Wiley Periodicals, Inc.

  8. Density gradients and internal dust in the Orion nebula

    Directory of Open Access Journals (Sweden)

    Luc Binette

    2002-01-01

    Full Text Available La estructura de ionización de la nebulosa de Orión puede ser descrita como una piel delgada sobre la superficie de una nube densa. Proponemos que una estratificación en la densidad, descrita por una ley de potencias (n / x_2, donde x es la distancia al frente de ionización, presenta propiedades que concuerdan con nuestros espectros de rendija larga de la nebulosa de Orión. Por ejemplo, existe una relación de unicidad entre el brillo superficial en HB, o la densidad del frente de ionización en [S II], y la escala L de la ley de potencias, donde L es la distancia entre el frente de ionización y el lugar donde comienza a crecer la densidad, cerca de la estrella excitadora. Es necesario incluir polvo interno a fin de obtener un ajuste aceptable a las observaciones tanto de la densidad del [S II], como del brillo superficial en HB. Los modelos que incluyen granos de polvo pequeños proporcionan un mejor ajuste que aquellos con granos grandes. Los gradientes de los cocientes de líneas observados a lo largo de la rendija se reproducen cualitativamente por nuestros modelos de densidad estratificada, suponiendo una temperatura estelar de 38,000 K. La desexcitación colisional parece ser la responsable de la mitad del gradiente observado en el cociente [N II] 5755/[N II] 6583, el cual es sensible a la temperatura. Proponemos que la relación empírica encontrada por Wen & O`Dell (1995 entre la densidad y la distancia a la estrella puede deberse a una estratificación de la densidad en forma de ley de potencias.

  9. Interrelationships between seminal parameters and sperm nuclear DNA damage before and after density gradient centrifugation: implications for assisted conception.

    Science.gov (United States)

    Tomlinson, M J; Moffatt, O; Manicardi, G C; Bizzaro, D; Afnan, M; Sakkas, D

    2001-10-01

    With an increase in the use of assisted reproduction technologies the requirements of the diagnostic semen analysis are constantly changing. Spermatozoa from patients undergoing IVF were analysed by examining the conventional semen parameters and DNA/chromatin integrity, using in-situ nick translation (NT) and the Chromomycin A(3) fluorochrome, which indirectly demonstrates a decreased presence of protamine. Samples were examined before and after preparation using discontinuous density gradient centrifugation. Density gradient centrifugation enriched samples by improving the percentage of morphologically normal forms by 138% and sperm nuclear integrity by 450%. Sperm nuclear integrity as assessed by in-situ nick translation (NT) demonstrated a very clear relationship with sperm concentration, motility and morphology. Morphology correlated with fertilization rates of patients undergoing IVF, while NT values of the spermatozoa post-preparation were significantly lower in pregnant patients. We have demonstrated that along with the classical semen parameters, the assessment of nuclear integrity improves the characterization of the semen sample and may be used as a tool for allocating patients to specific assisted reproduction treatments.

  10. Predicting Chemical Reactivity from the Charge Density through Gradient Bundle Analysis: Moving beyond Fukui Functions.

    Science.gov (United States)

    Morgenstern, Amanda; Wilson, Timothy R; Eberhart, M E

    2017-06-08

    Predicting chemical reactivity is a major goal of chemistry. Toward this end, atom condensed Fukui functions of conceptual density functional theory have been used to predict which atom is most likely to undergo electrophilic or nucleophilic attack, providing regioselectivity information. We show that the most probable regions for electrophilic attack within each atom can be predicted through analysis of gradient bundle volumes, a property that depends only on the charge density of the neutral molecules. We also introduce gradient bundle condensed Fukui functions to compare the stereoselectivity information obtained from gradient bundle volume analysis. We demonstrate this method using the test set of molecular fluorine, oxygen, nitrogen, carbon monoxide, and hydrogen cyanide.

  11. Horizontal density-gradient effects on simulation of flow and transport in the Potomac Estuary

    Science.gov (United States)

    Schaffranek, Raymond W.; Baltzer, Robert A.; ,

    1990-01-01

    A two-dimensional, depth-integrated, hydrodynamic/transport model of the Potomac Estuary between Indian Head and Morgantown, Md., has been extended to include treatment of baroclinic forcing due to horizontal density gradients. The finite-difference model numerically integrates equations of mass and momentum conservation in conjunction with a transport equation for heat, salt, and constituent fluxes. Lateral and longitudinal density gradients are determined from salinity distributions computed from the convection-diffusion equation and an equation of state that expresses density as a function of temperature and salinity; thus, the hydrodynamic and transport computations are directly coupled. Horizontal density variations are shown to contribute significantly to momentum fluxes determined in the hydrodynamic computation. These fluxes lead to enchanced tidal pumping, and consequently greater dispersion, as is evidenced by numerical simulations. Density gradient effects on tidal propagation and transport behavior are discussed and demonstrated.

  12. Effect of density gradient centrifugation on reactive oxygen species in human semen.

    Science.gov (United States)

    Takeshima, Teppei; Yumura, Yasushi; Kuroda, Shinnosuke; Kawahara, Takashi; Uemura, Hiroji; Iwasaki, Akira

    2017-06-01

    Density gradient centrifugation can separate motile sperm from immotile sperm and other cells for assisted reproduction, but may also remove antioxidants from seminal plasma, resulting in oxidative stress. Therefore, we investigated reactive oxygen species (ROS) concentrations and distribution in semen before and after density gradient centrifugation. We assessed semen volume, sperm concentration, sperm motility, and ROS levels before and after density gradient centrifugation (300 x g for 20 minutes) in 143 semen samples from 118 patients. The ROS removal rate was evaluated in ROS-positive samples and ROS formation rate in ROS-negative samples. Thirty-eight of 143 untreated samples (26.6%) were ROS-positive; sperm motility was significantly lower in these samples than in ROS-negative samples (p density gradient centrifugation, only seven of the 38 ROS-positive samples (18.42%) exhibited a ROS-positive lower layer (containing motile sperm) with a ROS removal rate of 81.58%, whereas the upper layer was ROS-positive in 24 samples (63.16%). In the ROS-negative group (n = 105), ROS was detected in 19 samples after centrifugation (18.10%, ROS generation rate), of which 18 were ROS-positive only in the upper layer or interface and the other was ROS-positive in both layers. Density gradient centrifugation can separate motile sperm from immotile sperm as well as remove ROS (including newly generated ROS). This data supports the view that density gradient centrifugation can select motile spermatozoa without enhancing oxidative stress. ROS: reactive oxygen species; SOD: superoxide dismutase; GPx: glutathione peroxidase; DNA: deoxyribonucleic acid; DGC: density gradient centrifugation; IUI: intrauterine insemination; IVF: in vitro fertilization; HEPES: 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid; EDTA: ethylenediaminetetraacetic acid; HTF: HEPES-buffered human tubal fluid; IMSI: intracytoplasmic morphologically selected sperm injection; SMAS: sperm motility analyzing

  13. The influence of mineral matter on the separation of amorphous marine kerogens using density gradient centrifugation

    NARCIS (Netherlands)

    Sinninghe Damsté, J.S.; Hartgers, W.A.; Leeuw, J.W. de; Ling, Y.; Crelling, J.C.

    1995-01-01

    Three relatively immature amorphous marine kerogens were subjected to density gradient centrifugation (DGC). The density fractions obtained were analyzed by Curie-point pyrolysis in combination with gas chromatography (Py-GC) and with gas chromatography-mass spectrometry (Py-GC-MS). Despite the

  14. Space charge profiles in low density polyethylene samples containing a permittivity/conductivity gradient

    DEFF Research Database (Denmark)

    Bambery, K.R.; Fleming, R.J.; Holbøll, Joachim

    2001-01-01

    .5×107 V m-1. Current density was also measured as a function of temperature and field. Space charge due exclusively to the temperature gradient was detected, with density of order 0.01 C m-3. The activation energy associated with the transport of electrons through the bulk was calculated as 0.09 e...

  15. Restoration of the Derivative Discontinuity in Kohn-Sham Density Functional Theory: An Efficient Scheme for Energy Gap Correction

    CERN Document Server

    Chai, Jeng-Da

    2012-01-01

    Based on a simple and physically motivated approximation to an expression for the derivative discontinuity (DD) of the exchange-correlation (XC) energy functional in Kohn-Sham density functional theory (KS-DFT), we show that the DD can be approximately expressed as an explicit universal functional of the ground-state density and the KS lowest unoccupied molecular orbital density, allowing the direct evaluation of the DD in the standard KS method without extra computational cost. The fundamental gap can be predicted by adding the estimated DD to the KS gap. This scheme is shown to be accurate in the prediction of the fundamental gaps for a wide variety of atoms and molecules. In addition, possible extensions of this scheme for improved accuracy are also discussed.

  16. Evaluation of centrifugation parameters for density gradient experiments by means of a programmable pocket calculator.

    Science.gov (United States)

    Kreutzfeldt, C

    1980-10-01

    A calculation program is proposed suitable for programmable pocket calculators (e.g. HP series) to estimate s20,w f omega2 dt values from density gradient centrifugation data. The program can be applied to linear or exponential density gradients prepared from sucrose or glycerol solutions spun in zonal rotors or swinging bucket rotors. A wide solute concentration range and temperature range is accounted for. Constants for empirical density calculation of glycerol and sucrose solutions concentrated in % (w/v) are estimated. Experimental verification of the program was carried out.

  17. Density-Gradient-Driven trapped-electron-modes in improved-confinement RFP plasmas

    Science.gov (United States)

    Duff, James

    2016-10-01

    Short wavelength density fluctuations in improved-confinement MST plasmas exhibit multiple features characteristic of the trapped-electron-mode (TEM), strong evidence that drift wave turbulence emerges in RFP plasmas when transport associated with MHD tearing is reduced. Core transport in the RFP is normally governed by magnetic stochasticity stemming from long wavelength tearing modes that arise from current profile peaking. Using inductive control, the tearing modes are reduced and global confinement is increased to values expected for a comparable tokamak plasma. The improved confinement is associated with a large increase in the pressure gradient that can destabilize drift waves. The measured density fluctuations have frequencies >50 kHz, wavenumbers k_phi*rho_sglobal tearing modes. Their amplitude increases with the local density gradient, and they exhibit a density-gradient threshold at R/L_n 15, higher than in tokamak plasmas by R/a. the GENE code, modified for RFP equilibria, predicts the onset of microinstability for these strong-gradient plasma conditions. The density-gradient-driven TEM is the dominant instability in the region where the measured density fluctuations are largest, and the experimental threshold-gradient is close to the predicted critical gradient for linear stability. While nonlinear analysis shows a large Dimits shift associated with predicted strong zonal flows, the inclusion of residual magnetic fluctuations causes a collapse of the zonal flows and an increase in the predicted transport to a level close to the experimentally measured heat flux. Similar circumstances could occur in the edge region of tokamak plasmas when resonant magnetic perturbations are applied for the control of ELMs. Work supported by US DOE.

  18. Multispecies Density and Temperature Gradient Dependence of Quasilinear Particle and Energy Fluxes

    Energy Technology Data Exchange (ETDEWEB)

    G. Rewoldt; R.V. Budny; W.M. Tang

    2004-08-09

    The variations of the normalized quasilinear particle and energy fluxes with artificial changes in the density and temperature gradients, as well as the variations of the linear growth rates and real frequencies, for ion temperature gradient and trapped-electron modes, are calculated. The quasilinear fluxes are normalized to the total energy flux, summed over all species. Here, realistic cases for tokamaks and spherical torii are considered which have two impurity species. For situations where there are substantial changes in the normalized fluxes, the ''diffusive approximation,'' in which the normalized fluxes are taken to be linear in the gradients, is seen to be inaccurate. Even in the case of small artificial changes in density or temperature gradients, changes in the fluxes of different species (''off-diagonal'') generally are significant, or even dominant, compared to those for the same species (''diagonal'').

  19. Cosmological constraints from the redshift dependence of the Alcock-Paczynski test: galaxy density gradient field

    CERN Document Server

    Li, Xiao-Dong; Forero-Romero, Jaime E; Kim, Juhan

    2014-01-01

    We propose a method based on the redshift dependence of the Alcock-Paczynski (AP) test to measure the expansion history of the Universe. It uses the isotropy of the galaxy density gradient field to constrain cosmological parameters. If the density parameter $\\Omega_m$ or the dark energy equation of state $w$ are incorrectly chosen, the gradient field appears to be anisotropic with the degree of anisotropy varying with redshift. We use this effect to constrain the cosmological parameters governing the expansion history of the Universe. Although redshift-space distortions (RSD) induced by galaxy peculiar velocities also produce anisotropies in the gradient field, these effects are close to uniform in magnitude over a large range of redshift. This makes the redshift variation of the gradient field anisotropy relatively insensitive to the RSD. By testing the method on mock surveys drawn from the Horizon Run 3 cosmological N-body simulations, we demonstrate that the cosmological parameters can be estimated without...

  20. DISCONTINUOUS FLOW OF TURBID DENSITY CURRENTS I. CHANNEL EXPANSION AND CONTRACTION

    Institute of Scientific and Technical Information of China (English)

    Jiahua FAN

    2005-01-01

    Laboratory experiments on turbid density currents were conducted to observe the flow features of these currents with abrupt contracted and expanded reaches. Experimental data were used to determine water entrainment coefficients for both channel expansion and contraction. Expressions for turbid density currents with water entrainment coefficients in abrupt contracted and expanded reaches were derived,and compared with experimental data.

  1. Projected gradient algorithms for Hartree-Fock and density matrix functional theory calculations

    Science.gov (United States)

    Cancès, Eric; Pernal, Katarzyna

    2008-04-01

    We present projected gradient algorithms designed for optimizing various functionals defined on the set of N-representable one-electron reduced density matrices. We show that projected gradient algorithms are efficient in minimizing the Hartree-Fock or the Müller-Buijse-Baerends functional. On the other hand, they converge very slowly when applied to the recently proposed BBk (k =1,2,3) functionals [O. Gritsenko et al., J. Chem. Phys. 122, 204102 (2005)]. This is due to the fact that the BBk functionals are not proper functionals of the density matrix.

  2. An Independent Component Analysis Algorithm through Solving Gradient Equation Combined with Kernel Density Estimation

    Institute of Scientific and Technical Information of China (English)

    XUE Yun-feng; WANG Yu-jia; YANG Jie

    2009-01-01

    A new algorithm for linear instantaneous independent component analysis is proposed based on max-imizing the log-likelihood contrast function which can be changed into a gradient equation. An iterative method is introduced to solve this equation efficiently. The unknown probability density functions as well as their first and second derivatives in the gradient equation are estimated by kernel density method. Computer simulations on artificially generated signals and gray scale natural scene images confirm the efficiency and accuracy of the proposed algorithm.

  3. Localization of the Proton Pump of Corn Coleoptile Microsomal Membranes by Density Gradient Centrifugation 1

    Science.gov (United States)

    Mandala, Suzanne; Mettler, Irvin J.; Taiz, Lincoln

    1982-01-01

    Previous studies characterizing an ATP-dependent proton pump in microsomal membrane vesicles of corn coleoptiles led to the conclusion that the proton pump was neither mitochondrial nor plasma membrane in origin (Mettler, Mandala, Taiz 1982 Plant Physiol 70: 1738-1742). To facilitate positive identification of the vesicles, corn coleoptile microsomal membranes were fractionated on linear sucrose and dextran gradients, with ATP-dependent [14C]methylamine uptake as a probe for proton pumping. On sucrose gradients, proton pumping activity exhibited a density of 1.11 grams/cubic centimeter and was coincident with the endoplasmic reticulum (ER). In the presence of high magnesium, the ER shifted to a heavier density, while proton pumping activity showed no density shift. On linear dextran gradients, proton pumping activity peaked at a lighter density than the ER. The proton pump appears to be electrogenic since both [14C]SCN− uptake and 36Cl− uptake activities coincided with [14C] methylamine uptake on dextran gradients. On the basis of density and transport properties, we conclude that the proton pumping vesicles are probably derived from the tonoplast. Nigericin-stimulated ATPase activity showed a broad distribution which did not coincide with any one membrane marker. PMID:16662755

  4. Preparation of Avocado Mitochondria Using Self-Generated Percoll Density Gradients and Changes in Buoyant Density during Ripening.

    Science.gov (United States)

    Moreau, F; Romani, R

    1982-11-01

    Mitochondria from avocado (Persea americana Mill, var. Fuerte and Hass) can be rapidly prepared at every stage of ripening using differential centrifugation and self-generated Percoll gradients. The procedure results in improved oxidative and phosphorylative properties, especially for mitochondria isolated from preclimacteric fruits.A gradual change in the buoyant density of avocado mitochondria takes place during ripening. Climacteric and postclimacteric avocado mitochondria have the same buoyant density as other plant mitochondria (potato, cauliflower), whereas mitochondria from preclimacteric fruit have a lower density. The transition in buoyant density occurs during the climacteric rise, and two populations of intact mitochondria (p = 1.060 and p = 1.075) can be separated at this stage. Evidence indicates that the difference in mitochondrial buoyant density between preclimacteric and postclimacteric mitochondria is likely due to interactions with soluble cytosolic components.

  5. Investigation of Vapor-Liquid Nucleation for Associating Fluids by Density Gradient Theory

    Institute of Scientific and Technical Information of China (English)

    FU Dong; LIU Jianmin

    2009-01-01

    An equation of state (EOS) applicable to both the uniform and non-uniform associating fluids was established by using the density-gradient expansion, in which the influence parameter κis formulated as a function of tempera-ture. The molecular parameters were regressed by fitting to the experimental data of vapor pressures and liquid den-sities. Within the framework of density gradient theory (DGT), the nucleation rates for water, heavy water, metha-nol, ethanol, 1-propanoi, 1-butanol, 1-pentanol and 1-hexanol were calculated. The results were satisfactory com-pared with the experimental data. Our study shows that DGT preserves all the advantages of density functional the-ory (DFT) in capturing the structure and properties of nucleus but gives much more accurate nucleation rates by adjusting the influence parameter.

  6. Stabilized density gradient theory algorithm for modeling interfacial properties of pure and mixed systems

    CERN Document Server

    Mu, Xiaoqun; Alpak, Faruk O; Chapman, Walter G

    2016-01-01

    Density gradient theory (DGT) allows fast and accurate determination of surface tension and density profile through a phase interface. Several algorithms have been developed to apply this theory in practical calculations. While the conventional algorithm requires a reference substance of the system, a modified "stabilized density gradient theory" (SDGT) algorithm is introduced in our work to solve DGT equations for multiphase pure and mixed systems. This algorithm makes it possible to calculate interfacial properties accurately at any domain size larger than the interface thickness without choosing a reference substance or assuming the functional form of the density profile. As part of DGT inputs, the perturbed chain statistical associating fluid theory (PC-SAFT) equation of state (EoS) was employed for the first time with the SDGT algorithm. PC-SAFT has excellent performance in predicting liquid phase properties as well as phase behaviors. The SDGT algorithm with the PC-SAFT EoS was tested and compared with ...

  7. Density Gradient Ultracentrifugation to Isolate Endogenous Protein Complexes after Affinity Capture.

    Science.gov (United States)

    Fernandez-Martinez, Javier; LaCava, John; Rout, Michael P

    2016-07-01

    This protocol describes the isolation of native protein complexes by density gradient ultracentrifugation. The outcome of an affinity capture and native elution experiment is generally a mixture of (1) the complex(es) associated with the protein of interest under the specific conditions of capture, (2) fragments of the complex generated by degradation or disassembly during the purification procedure, and (3) the protease or reagent used to natively elute the sample. To separate these components and isolate a homogeneous complex, an additional step of purification is required. Rate-zonal density gradient ultracentrifugation is a reliable and powerful technique for separating particles based on their hydrodynamic volume. The density gradient is generated by mixing low- and high-density solutions of a suitable low-molecular-weight inert solute (e.g., sucrose or glycerol). The gradient is formed in a solvent that could be any of the solvents used for the affinity capture and native elution and should help to preserve the structure and activity of the assembly.

  8. Vertical density gradient in the eastern North Atlantic during the last 30,000 years

    Energy Technology Data Exchange (ETDEWEB)

    Rogerson, M.; Ramirez, J. [University of Hull, Geography Department, Hull (United Kingdom); Bigg, G.R. [University of Sheffield, Department of Geography, Sheffield (United Kingdom); Rohling, E.J. [University of Southampton, National Oceanography Centre, School of Ocean and Earth Science, Southampton (United Kingdom)

    2012-08-15

    Past changes in the density and momentum structure of oceanic circulation are an important aspect of changes in the Atlantic Meridional Overturning Circulation and consequently climate. However, very little is known about past changes in the vertical density structure of the ocean, even very extensively studied systems such as the North Atlantic. Here we exploit the physical controls on the settling depth of the dense Mediterranean water plume derived from the Strait of Gibraltar to obtain the first robust, observations-based, probabilistic reconstruction of the vertical density gradient in the eastern North Atlantic during the last 30,000 years. We find that this gradient was weakened by more than 50%, relative to the present, during the last Glacial Maximum, and that changes in general are associated with reductions in AMOC intensity. However, we find only a small change during Heinrich Event 1 relative to the Last Glacial Maximum, despite strong evidence that overturning was substantially altered. This implies that millennial-scale changes may not be reflected in vertical density structure of the ocean, which may be limited to responses on an ocean-overturning timescale or longer. Regardless, our novel reconstruction of Atlantic density structure can be used as the basis for a dynamical measure for validation of model-based AMOC reconstructions. In addition, our general approach is transferrable to other marginal sea outflow plumes, to provide estimates of oceanic vertical density gradients in other locations. (orig.)

  9. Comparative study on density gradients and swim-up preparation techniques utilizing neat and cryopreserved spermatozoa

    Institute of Scientific and Technical Information of China (English)

    Shyam S.R. Allamaneni; Ashok Agarwal; Sreedhar Rama; Pavithra Ranganathan; Rakesh K. Sharma

    2005-01-01

    Aim: To 1) compare post-wash and post-thaw parameters of sperm processed with PureSperm density gradient technique and swim-up method; and 2) test the efficacy of two commonly available density gradient media PureSperm and Isolate. Methods: This prospective study used semen specimens from 22 patients. Specimens from nine patients were processed by both PureSperm density gradient and swim-up method. These specimens were then cryopreserved.Thirteen specimens were processed by both PureSperm (40 % and 80 %) and Isolate (50 % and 90 %) double density gradient techniques. The two fractions processed by both PureSperm and swim-up were analyzed for post-wash sperm characteristics. Post-thaw analysis was done after 24 hours. Sperm fractions obtained after processing with PureSperm and Isolate were compared for post-wash sperm characteristics and ROS levels. Results: Specimens prepared with PureSperm had significantly higher median total motile sperm counts (TMSC) (32.2 × 106 vs.17.6 × 106), recovery rates (69.2 % vs. 50.0 %), and longevity at 4 hours (83.0 % vs. 55.0 %) compared to specimen prepared by swim-up. Post-thaw specimens also had a higher recovery and longevity at 4 hours with PureSperm as compared to the swim-up. Semen specimens processed by PureSperm had significantly higher total sperm count,TMSC, and percentage recovery rates (30.0 % vs. 19.7 %) than Isolate. Conclusion: Semen quality is better preserved in fresh and cryopreserved semen prepared with PureSperm density gradient compared to swim-up. A significant enrichment of sperm is observed with PureSperm compared to Isolate. Higher recovery rates of mature motile sperm obtained after PureSperm sperm preparation may be beneficial for successful ART.

  10. Microfluidic Adaptation of Density-Gradient Centrifugation for Isolation of Particles and Cells

    Directory of Open Access Journals (Sweden)

    Yuxi Sun

    2017-08-01

    Full Text Available Density-gradient centrifugation is a label-free approach that has been extensively used for cell separations. Though elegant, this process is time-consuming (>30 min, subjects cells to high levels of stress (>350 g and relies on user skill to enable fractionation of cells that layer as a narrow band between the density-gradient medium and platelet-rich plasma. We hypothesized that microfluidic adaptation of this technique could transform this process into a rapid fractionation approach where samples are separated in a continuous fashion while being exposed to lower levels of stress (<100 g for shorter durations of time (<3 min. To demonstrate proof-of-concept, we designed a microfluidic density-gradient centrifugation device and constructed a setup to introduce samples and medium like Ficoll in a continuous, pump-less fashion where cells and particles can be exposed to centrifugal force and separated via different outlets. Proof-of-concept studies using binary mixtures of low-density polystyrene beads (1.02 g/cm3 and high-density silicon dioxide beads (2.2 g/cm3 with Ficoll–Paque (1.06 g/cm3 show that separation is indeed feasible with >99% separation efficiency suggesting that this approach can be further adapted for separation of cells.

  11. The effect of density gradient on the growth rate of relativistic Weibel instability

    Energy Technology Data Exchange (ETDEWEB)

    Mahdavi, M., E-mail: m.mahdavi@umz.ac.ir [Physics Department, University of Mazandaran, P.O. Box 47415-416, Babolsar (Iran, Islamic Republic of); Khodadadi Azadboni, F., E-mail: f.khodadadi@stu.umz.ac.ir [Physics Department, University of Mazandaran, P.O. Box 47415-416, Babolsar (Iran, Islamic Republic of); Young Researchers Club, Sari Branch, Islamic Azad University, P.O. Box 48161-194, Sari (Iran, Islamic Republic of)

    2014-02-15

    In this paper, the effect of density gradient on the Weibel instability growth rate is investigated. The density perturbations in the near corona fuel, where temperature anisotropy, η, is larger than the critical temperature anisotropy, η{sub c}, (η > η{sub c}), enhances the growth rate of Weibel instability due to the sidebands coupled with the electron oscillatory velocity. But for η < η{sub c}, the thermal spread of the energetic electrons reduces the growth rate. Also, the growth rate can be reduced if the relativistic parameter (Lorentz factor) is sufficiently large, γ > 2. The analysis shows that relativistic effects and density gradient tend to stabilize the Weibel instability. The growth rate can be reduced by 88% by reducing η by a factor of 100 and increasing relativistic parameter by a factor of 3.

  12. Space charge profiles in low density polyethylene samples containing a permittivity/conductivity gradient

    DEFF Research Database (Denmark)

    Bambery, K.R.; Fleming, R.J.; Holbøll, Joachim

    2001-01-01

    Laser induced pressure pulse space charge measurements were made on 1.5 mm thick plaques of high purity low density polyethylene equipped with vacuum-evaporated aluminium electrodes. Temperature differences up to 20 °C were maintained across the samples, which were subjected to dc fields up to 1.......5×107 V m-1. Current density was also measured as a function of temperature and field. Space charge due exclusively to the temperature gradient was detected, with density of order 0.01 C m-3. The activation energy associated with the transport of electrons through the bulk was calculated as 0.09 e...

  13. Relative contributions of temperature and salinity to seasonal mixed layer density changes and horizontal density gradients

    OpenAIRE

    Johnson, Gregory C.; Schmidtko, Sunke; Lyman, John M.

    2012-01-01

    Temperature and salinity both contribute to ocean density, including its seasonal cycle and spatial patterns in the mixed layer. Temperature and salinity profiles from the Argo Program allow construction and analysis of a global, monthly, mixed layer climatology. Temperature changes dominate the seasonal cycle of mixed layer density in most regions, but salinity changes are dominant in the tropical warm pools, Arctic, and Antarctic. Under the Intertropical Convergence Zone, temperature and sa...

  14. A collocation method for surface tension calculations with the density gradient theory

    DEFF Research Database (Denmark)

    Larsen, Peter Mahler; Maribo-Mogensen, Bjørn; Kontogeorgis, Georgios M.

    2016-01-01

    Surface tension calculations are important in many industrial applications and over a wide range of temperatures, pressures and compositions. Empirical parachor methods are not suitable over a wide condition range and the combined use of density gradient theory with equations of state has been...... proposed in literature. Often, many millions of calculations are required in the gradient theory methods, which is computationally very intensive. In this work, we have developed an algorithm to calculate surface tensions an order of magnitude faster than the existing methods, with no loss of accuracy...

  15. Effects of density, velocity gradient, and compressibility on side-jet formation in round jets with variable density

    Science.gov (United States)

    Muramatsu, Akinori

    2013-11-01

    When a low density gas compared with the ambient gas is discharged from a round nozzle, side jets that are radial ejections of jet fluid are generated at the initial region of the jet. The density ratio between the jet fluid and the ambient fluid is a main parameter for the side-jet formation. Since the side-jet formation is also related to the instability of shear layer, it depends on the velocity gradient of the shear layer in the jet. The velocity gradient is evaluated by a ratio of the momentum thickness and the nozzle diameter at the nozzle exit. Compressibility suppresses the instability and the generation of the side jets. The compressibility is evaluated by a Mach number, which is a ratio defined by an issuing velocity of the jet and a sound velocity in the ambient fluid. Influence of these three parameters on the side-jet formation was examined experimentally. The density ratio and momentum thickness ratio were varied from 0.14 to 1.53, and from 14 to 155, respectively. The Mach number was varied to 0.7. Existence of side jets was confirmed by flow visualization using a laser sheet. Domains for the side-jet formation by the density ratio, the momentum thickness ratio, and the Mach number were determined.

  16. Pitfalls of using the geometric-mean combining rule in the density gradient theory

    DEFF Research Database (Denmark)

    Liang, Xiaodong; Michelsen, Michael Locht; Kontogeorgis, Georgios

    2016-01-01

    It is popular and attractive to model the interfacial tension using the density gradient theory with the geometric-mean combining rule, in which the same equation of state is used for the interface and bulk phases. The computational efficiency is the most important advantage of this theory. In th...... the interface could be considered as a warning for the unsuccessful applications of the geometric-mean density gradient theory combined with the chosen thermodynamic model, even if numerical pitfalls do not occur. (C) 2016 Elsevier B.V. All rights reserved.......It is popular and attractive to model the interfacial tension using the density gradient theory with the geometric-mean combining rule, in which the same equation of state is used for the interface and bulk phases. The computational efficiency is the most important advantage of this theory....... In this work, it has been mathematically shown that the theory fails if the solution profile is not monotonic in the path function, which is defined as the summation of the density multiplied by the square root of the influence parameter over all components. A computational solution procedure is then presented...

  17. Baroclinic pressure gradient difference schemes of subtracting the local averaged density stratification in sigma coordinates models

    Institute of Scientific and Technical Information of China (English)

    ZHU Shouxian; ZHANG Wenjing

    2008-01-01

    Much has been written of the error in computing the baroclinic pressure gradient (BPG) with sigma coordinates in ocean or atmos- pheric numerical models. The usual way to reduce the error is to subtract area-averaged density stratification of the whole computa- tion region. But if there is great difference between the area-averaged and the local averaged density stratification, the error will be obvious. An example is given to show that the error from this method may be larger than that from no correction sometimes. The definition of local area is put forward. Then, four improved BPG difference schemes of subtracting the local averaged density strat- ification are designed to reduce the error. Two of them are for diagnostic calculation (density field is fixed), and the others are for prognostic calculation (density field is not fixed). The results show that the errors from these schemes all significantly decrease.

  18. Faranoff-Riley type I jet deceleration at density discontinuities "Relativistic hydrodynamics with realistic equation of state"

    CERN Document Server

    Meliani, Z; Giacomazzo, B

    2008-01-01

    The deceleration mechanisms for relativistic jets in active galactic nuclei remain an open question, and in this paper we propose a model which could explain sudden jet deceleration, invoking density discontinuities. This is particularly motivated by recent indications from HYMORS. Exploiting high resolution, numerical simulations, we demonstrate that for both high and low energy jets, always at high Lorentz factor, a transition to a higher density environment can cause a significant fraction of the directed jet energy to be lost on reflection. This can explain how one-sided jet deceleration and a transition to FR I type can occur in HYMORS, which start as FR II (and remain so on the other side). For that purpose, we implemented in the relativistic hydrodynamic grid-adaptive AMRVAC code, the Synge-type equation of state introduced in the general polytropic case by Meliani et al. (2004). We present results for 10 model computations, varying the inlet Lorentz factor from 10 to 20, including uniform or decreasin...

  19. Effect of semen extender and density gradient centrifugation on the motility and fertility of turkey spermatozoa.

    Science.gov (United States)

    Morrell, J M; Persson, B; Tjellström, H; Laessker, A; Nilsson, H; Danilova, M; Holmes, P V

    2005-12-01

    In the absence of commercially viable methods for cryopreserving turkey spermatozoa, new processing methods are required to extend the functional life of stored turkey spermatozoa for artificial insemination. The present study evaluates the efficacy of a new extender (Turkey Semen Extend) and investigates the use of density gradient centrifugation in processing turkey spermatozoa for artificial insemination. The new extender is compared with two commercially available turkey semen extenders, Beltsville Poultry Semen Extender and Ovodyl. Turkey spermatozoa in Turkey Semen Extend were still motile 20 h after collection, representing a considerable improvement over the other semen extenders (40%, 0% and 8% for Turkey Semen Extend, Beltsville Poultry Semen Extender and Ovodyl, respectively). A field trial on a commercial turkey farm showed improved fertilization rates following insemination of turkey hens with semen extended in Turkey Semen Extend (89.7%) compared with Beltsville Poultry Semen Extender (86.9%). This difference is statistically significant (p < 0.05). Processing on a density gradient, optimized for turkey spermatozoa, also increased sperm survival (50% gradient-prepared spermatozoa still motile after 18 h compared with <10% non-processed spermatozoa). Preliminary studies indicate that gradient preparation of spermatozoa may aid survival during cryopreservation.

  20. Variable density sampling based on physically plausible gradient waveform. Application to 3D MRI angiography

    CERN Document Server

    Chauffert, Nicolas; Boucher, Marianne; Mériaux, Sébastien; CIUCIU, Philippe

    2015-01-01

    Performing k-space variable density sampling is a popular way of reducing scanning time in Magnetic Resonance Imaging (MRI). Unfortunately, given a sampling trajectory, it is not clear how to traverse it using gradient waveforms. In this paper, we actually show that existing methods [1, 2] can yield large traversal time if the trajectory contains high curvature areas. Therefore, we consider here a new method for gradient waveform design which is based on the projection of unrealistic initial trajectory onto the set of hardware constraints. Next, we show on realistic simulations that this algorithm allows implementing variable density trajectories resulting from the piecewise linear solution of the Travelling Salesman Problem in a reasonable time. Finally, we demonstrate the application of this approach to 2D MRI reconstruction and 3D angiography in the mouse brain.

  1. Analytic calculations of hyper-Raman spectra from density functional theory hyperpolarizability gradients

    Energy Technology Data Exchange (ETDEWEB)

    Ringholm, Magnus; Ruud, Kenneth [Centre for Theoretical and Computational Chemistry, Department of Chemistry, University of Tromsø – The Arctic University of Norway, 9037 Tromsø (Norway); Bast, Radovan [Theoretical Chemistry and Biology, School of Biotechnology, Royal Institute of Technology, AlbaNova University Center, S-10691 Stockholm (Sweden); PDC Center for High Performance Computing, Royal Institute of Technology, S-10044 Stockholm (Sweden); Oggioni, Luca [Centre for Theoretical and Computational Chemistry, Department of Chemistry, University of Tromsø – The Arctic University of Norway, 9037 Tromsø (Norway); Department of Physics G. Occhialini, University of Milano Bicocca, Piazza della scienza 3, 20126 Milan (Italy); Ekström, Ulf [Centre for Theoretical and Computational Chemistry, Department of Chemistry, University of Oslo, P.O. Box 1033 Blindern, 0315 Oslo (Norway)

    2014-10-07

    We present the first analytic calculations of the geometrical gradients of the first hyperpolarizability tensors at the density-functional theory (DFT) level. We use the analytically calculated hyperpolarizability gradients to explore the importance of electron correlation effects, as described by DFT, on hyper-Raman spectra. In particular, we calculate the hyper-Raman spectra of the all-trans and 11-cis isomers of retinal at the Hartree-Fock (HF) and density-functional levels of theory, also allowing us to explore the sensitivity of the hyper-Raman spectra on the geometrical characteristics of these structurally related molecules. We show that the HF results, using B3LYP-calculated vibrational frequencies and force fields, reproduce the experimental data for all-trans-retinal well, and that electron correlation effects are of minor importance for the hyper-Raman intensities.

  2. Analytic calculations of hyper-Raman spectra from density functional theory hyperpolarizability gradients

    Science.gov (United States)

    Ringholm, Magnus; Bast, Radovan; Oggioni, Luca; Ekström, Ulf; Ruud, Kenneth

    2014-10-01

    We present the first analytic calculations of the geometrical gradients of the first hyperpolarizability tensors at the density-functional theory (DFT) level. We use the analytically calculated hyperpolarizability gradients to explore the importance of electron correlation effects, as described by DFT, on hyper-Raman spectra. In particular, we calculate the hyper-Raman spectra of the all-trans and 11-cis isomers of retinal at the Hartree-Fock (HF) and density-functional levels of theory, also allowing us to explore the sensitivity of the hyper-Raman spectra on the geometrical characteristics of these structurally related molecules. We show that the HF results, using B3LYP-calculated vibrational frequencies and force fields, reproduce the experimental data for all-trans-retinal well, and that electron correlation effects are of minor importance for the hyper-Raman intensities.

  3. [gamma]-ray CT examination of density gradients in slip ceramics: correlation with stress distribution

    Energy Technology Data Exchange (ETDEWEB)

    Sawicka, B.D. (AECL Research, Chalk River Labs., Ontario (Canada)); Murphy, J.G.; Taheri, F.; Kanary, L.E. (Advanced Materials Engineering Centre, Halifax, Nova Scotia (Canada))

    1992-06-01

    Residual stresses caused by processing techniques reduce the safe allowable design life of components. This is especially critical for brittle materials, like ceramics, which do not exhibit plastic deformation. During development of the manufacturing process for an experimental high-precision ceramic component, a characteristic cracking pattern occurred in a series of prototypes, which suggested development of stresses during densification, either during drying or sintering. To examine parameters which may influence the development of these residual stresses, a series of simple geometry specimens were prepared and characterized for density gradients using computed tomography (CT). Using the measured values of density gradients, a model of the sintering process was made and the resultant stress distribution in the parts calculated. Results indicate that the use of nonlinear finite element analysis in conjunction with hypoelastic materials modeling qualitatively represents the sintering stresses.

  4. γ-ray CT examination of density gradients in slip cast ceramics: correlation with stress distribution

    Science.gov (United States)

    Sawicka, B. D.; Murphy, J. G.; Taheri, F.; Kanary, L. E.

    1992-06-01

    Residual stresses caused by processing techniques reduce the safe allowable design life of components. This is especially critical for brittle materials, like ceramics, which do not exhibit plastic deformation. During development of the manufacturing process for an experimental high-precision ceramic component, a characteristic cracking pattern occurred in a series of prototypes, which suggested development of stresses during densification, either during drying or sintering. To examine parameters which may influence the development of these residual stresses, a series of simple geometry specimens were prepared and characterized for density gradients using computed tomography (CT). Using the measured values of density gradients, a model of the sintering process was made and the resultant stress distribution in the parts calculated. Results indicate that the use of nonlinear finite element analysis in conjunction with hypoelastic materials modelling qualitatively represents the sintering stresses.

  5. Direct numerical simulations of particle-laden density currents with adaptive, discontinuous finite elements

    Directory of Open Access Journals (Sweden)

    S. D. Parkinson

    2014-09-01

    Full Text Available High-resolution direct numerical simulations (DNSs are an important tool for the detailed analysis of turbidity current dynamics. Models that resolve the vertical structure and turbulence of the flow are typically based upon the Navier–Stokes equations. Two-dimensional simulations are known to produce unrealistic cohesive vortices that are not representative of the real three-dimensional physics. The effect of this phenomena is particularly apparent in the later stages of flow propagation. The ideal solution to this problem is to run the simulation in three dimensions but this is computationally expensive. This paper presents a novel finite-element (FE DNS turbidity current model that has been built within Fluidity, an open source, general purpose, computational fluid dynamics code. The model is validated through re-creation of a lock release density current at a Grashof number of 5 × 106 in two and three dimensions. Validation of the model considers the flow energy budget, sedimentation rate, head speed, wall normal velocity profiles and the final deposit. Conservation of energy in particular is found to be a good metric for measuring model performance in capturing the range of dynamics on a range of meshes. FE models scale well over many thousands of processors and do not impose restrictions on domain shape, but they are computationally expensive. The use of adaptive mesh optimisation is shown to reduce the required element count by approximately two orders of magnitude in comparison with fixed, uniform mesh simulations. This leads to a substantial reduction in computational cost. The computational savings and flexibility afforded by adaptivity along with the flexibility of FE methods make this model well suited to simulating turbidity currents in complex domains.

  6. Direct numerical simulations of particle-laden density currents with adaptive, discontinuous finite elements

    Science.gov (United States)

    Parkinson, S. D.; Hill, J.; Piggott, M. D.; Allison, P. A.

    2014-09-01

    High-resolution direct numerical simulations (DNSs) are an important tool for the detailed analysis of turbidity current dynamics. Models that resolve the vertical structure and turbulence of the flow are typically based upon the Navier-Stokes equations. Two-dimensional simulations are known to produce unrealistic cohesive vortices that are not representative of the real three-dimensional physics. The effect of this phenomena is particularly apparent in the later stages of flow propagation. The ideal solution to this problem is to run the simulation in three dimensions but this is computationally expensive. This paper presents a novel finite-element (FE) DNS turbidity current model that has been built within Fluidity, an open source, general purpose, computational fluid dynamics code. The model is validated through re-creation of a lock release density current at a Grashof number of 5 × 106 in two and three dimensions. Validation of the model considers the flow energy budget, sedimentation rate, head speed, wall normal velocity profiles and the final deposit. Conservation of energy in particular is found to be a good metric for measuring model performance in capturing the range of dynamics on a range of meshes. FE models scale well over many thousands of processors and do not impose restrictions on domain shape, but they are computationally expensive. The use of adaptive mesh optimisation is shown to reduce the required element count by approximately two orders of magnitude in comparison with fixed, uniform mesh simulations. This leads to a substantial reduction in computational cost. The computational savings and flexibility afforded by adaptivity along with the flexibility of FE methods make this model well suited to simulating turbidity currents in complex domains.

  7. Separation of Bacteria, Protozoa and Carbon Nanotubes by Density Gradient Centrifugation

    Directory of Open Access Journals (Sweden)

    Monika Mortimer

    2016-10-01

    Full Text Available Sustainable production and use of carbon nanotube (CNT-enabled materials require efficient assessment of CNT environmental hazards, including the potential for CNT bioaccumulation and biomagnification in environmental receptors. Microbes, as abundant organisms responsible for nutrient cycling in soil and water, are important ecological receptors for studying the effects of CNTs. Quantification of CNT association with microbial cells requires efficient separation of CNT-associated cells from individually dispersed CNTs and CNT agglomerates. Here, we designed, optimized, and demonstrated procedures for separating bacteria (Pseudomonas aeruginosa from unbound multiwall carbon nanotubes (MWCNTs and MWCNT agglomerates using sucrose density gradient centrifugation. We demonstrate separation of protozoa (Tetrahymena thermophila from MWCNTs, bacterial agglomerates, and protozoan fecal pellets by centrifugation in an iodixanol solution. The presence of MWCNTs in the density gradients after centrifugation was determined by quantification of 14C-labeled MWCNTs; the recovery of microbes from the density gradient media was confirmed by optical microscopy. Protozoan intracellular contents of MWCNTs and of bacteria were also unaffected by the designed separation process. The optimized methods contribute to improved efficiency and accuracy in quantifying MWCNT association with bacteria and MWCNT accumulation in protozoan cells, thus supporting improved assessment of CNT bioaccumulation.

  8. Separation of Bacteria, Protozoa and Carbon Nanotubes by Density Gradient Centrifugation

    Science.gov (United States)

    Mortimer, Monika; Petersen, Elijah J.; Buchholz, Bruce A.; Holden, Patricia A.

    2016-01-01

    Sustainable production and use of carbon nanotube (CNT)-enabled materials require efficient assessment of CNT environmental hazards, including the potential for CNT bioaccumulation and biomagnification in environmental receptors. Microbes, as abundant organisms responsible for nutrient cycling in soil and water, are important ecological receptors for studying the effects of CNTs. Quantification of CNT association with microbial cells requires efficient separation of CNT-associated cells from individually dispersed CNTs and CNT agglomerates. Here, we designed, optimized, and demonstrated procedures for separating bacteria (Pseudomonas aeruginosa) from unbound multiwall carbon nanotubes (MWCNTs) and MWCNT agglomerates using sucrose density gradient centrifugation. We demonstrate separation of protozoa (Tetrahymena thermophila) from MWCNTs, bacterial agglomerates, and protozoan fecal pellets by centrifugation in an iodixanol solution. The presence of MWCNTs in the density gradients after centrifugation was determined by quantification of 14C-labeled MWCNTs; the recovery of microbes from the density gradient media was confirmed by optical microscopy. Protozoan intracellular contents of MWCNTs and of bacteria were also unaffected by the designed separation process. The optimized methods contribute to improved efficiency and accuracy in quantifying MWCNT association with bacteria and MWCNT accumulation in protozoan cells, thus supporting improved assessment of CNT bioaccumulation. PMID:27917301

  9. Phase-mixing self-injection into wakefield acceleration structure driven in a rising density gradient

    Science.gov (United States)

    Sahai, Aakash

    2015-11-01

    We model the phase-mixing self-injection of electrons into the plasma-wakefield acceleration structures driven in a longitudinally rising density gradient. In several laser-plasma acceleration experiments a long tail of accelerated electrons of different energies is experimentally observed. Self-injection is the process where some of the plasma electrons lose coherence with the wave due to non-linearities. The non-linearity is inherently and intentionally induced in the plasma oscillations due to the variation of the restoring force along the rising density gradient. These electrons then get trapped in and propagate with the accelerating phase of the plasma-wave. The onset of trapping is shown to scale with the gradient of the rising density and the amplitude of oscillations using the phase-mixing model. We computationally verify the phase-mixing model in planar geometry using PIC codes. The trapping of electrons in cylindrical electron plasma oscillations in the non-linear regime is verified with scaling similar to the planar geometry phase-mixing model. A full theory of longitudinal phase-mixing of radial oscillations is currently underway. The importance of this work for laser-plasma acceleration lies in consistently accelerating just the desired mono-energetic bunch. Work supported by the US Department of Energy under DE-SC0010012 and the National Science Foundation under NSF-PHY-0936278. Done...processed 1928 records...14:16:38

  10. A spatially resolved nucleic acid biochip based on a gradient of density of immobilized probe oligonucleotide

    Energy Technology Data Exchange (ETDEWEB)

    Park, Sung Han [Chemical Sensors Group, Department of Chemical and Physical Sciences, University of Toronto at Mississauga, 3359 Mississauga Road North, Mississauga, Ontario, L5L 1C6 (Canada); Krull, Ulrich [Chemical Sensors Group, Department of Chemical and Physical Sciences, University of Toronto at Mississauga, 3359 Mississauga Road North, Mississauga, Ontario, L5L 1C6 (Canada)]. E-mail: ukrull@utm.utoronto.ca

    2006-04-06

    The potential for a new biochip design based on a continuous gradient of density of immobilized single-stranded DNA oligonucleotide probes (ssDNA) is explored. This gradient resolved information platform (GRIP) can provide sequence identification based on the spatial location and extent of hybridization by a target sequence. Surfaces based on indium-tin oxide (ITO) on glass were first functionalized by 3-aminopropyltriethoxysilane (APTES) followed by attachment of glutaraldehyde, prior to immobilization of oligonucleotide probe that was terminated with amine. The use of Cy{sub 3} and Cy{sub 5} dye-labelled ssDNA probes and targets allowed estimation of density and correlation of the location of binding of labelled targets. Probe molecules of 20 mer lengths were loaded to produce density gradients in the range of 1.0-200 ng/mm{sup 2}. The biochips could resolve a mixture of fully complementary five base-pair mismatched targets by the location of binding on the surface. Thermal control provided additional selectivity. Thermal cycling and washing provided for regeneration of the surface, and the fluorescence intensities showed no deterioration in at least five cycles of hybridization reactions.

  11. The influence of near-wall density and viscosity gradients on turbulence in channel flows

    CERN Document Server

    Patel, Ashish; Pecnik, Rene

    2016-01-01

    The influence of near-wall density and viscosity gradients on near-wall turbulence in a channel are studied by means of Direct Numerical Simulation (DNS) of the low-Mach number approximation of the Navier--Stokes equations. Different constitutive relations for density and viscosity as a function of temperature are used in order to mimic a wide range of fluid behaviours and to develop a generalised framework for studying turbulence modulations in variable property flows. Instead of scaling the velocity solely based on local density, as done for the van Driest transformation, we derive an extension of the scaling that is based on gradients of the semi-local Reynolds number $Re_\\tau^*$. This extension of the van Driest transformation is able to collapse velocity profiles for flows with near-wall property gradients as a function of the semi-local wall coordinate. However, flow quantities like mixing length, turbulence anisotropy and turbulent vorticity fluctuations do not show a universal scaling very close to th...

  12. Isolation of human salivary extracellular vesicles by iodixanol density gradient ultracentrifugation and their characterizations

    Directory of Open Access Journals (Sweden)

    Kazuya Iwai

    2016-05-01

    Full Text Available Diagnostic methods that focus on the extracellular vesicles (EVs present in saliva have been attracting great attention because of their non-invasiveness. EVs contain biomolecules such as proteins, messenger RNA (mRNA and microRNA (miRNA, which originate from cells that release EVs, making them an ideal source for liquid biopsy. Although there have been many reports on density-based fractionation of EVs from blood and urine, the number of reports on EVs from saliva has been limited, most probably because of the difficulties in separating EVs from viscous saliva using density gradient centrifugation. This article establishes a protocol for the isolation of EVs from human saliva using density gradient centrifugation. The fractionated salivary EVs were characterized by atomic force microscopy, western blot and reverse transcription polymerase chain reaction. The results indicate that salivary EVs have a smaller diameter (47.8±12.3 nm and higher density (1.11 g/ml than EVs isolated from conditioned cell media (74.0±23.5 nm and 1.06 g/ml, respectively. Additionally, to improve the throughput of density-based fractionation of EVs, the original protocol was further modified by using a fixed angle rotor instead of a swinging rotor. It was also confirmed that several miRNAs were expressed strongly in the EV-marker-expressing fractions.

  13. Isolation of human salivary extracellular vesicles by iodixanol density gradient ultracentrifugation and their characterizations

    Science.gov (United States)

    Iwai, Kazuya; Minamisawa, Tamiko; Suga, Kanako; Yajima, Yasutomo; Shiba, Kiyotaka

    2016-01-01

    Diagnostic methods that focus on the extracellular vesicles (EVs) present in saliva have been attracting great attention because of their non-invasiveness. EVs contain biomolecules such as proteins, messenger RNA (mRNA) and microRNA (miRNA), which originate from cells that release EVs, making them an ideal source for liquid biopsy. Although there have been many reports on density-based fractionation of EVs from blood and urine, the number of reports on EVs from saliva has been limited, most probably because of the difficulties in separating EVs from viscous saliva using density gradient centrifugation. This article establishes a protocol for the isolation of EVs from human saliva using density gradient centrifugation. The fractionated salivary EVs were characterized by atomic force microscopy, western blot and reverse transcription polymerase chain reaction. The results indicate that salivary EVs have a smaller diameter (47.8±12.3 nm) and higher density (1.11 g/ml) than EVs isolated from conditioned cell media (74.0±23.5 nm and 1.06 g/ml, respectively). Additionally, to improve the throughput of density-based fractionation of EVs, the original protocol was further modified by using a fixed angle rotor instead of a swinging rotor. It was also confirmed that several miRNAs were expressed strongly in the EV-marker-expressing fractions. PMID:27193612

  14. The effect of longitudinal density gradient on electron plasma wake field acceleration

    CERN Document Server

    Tsiklauri, David

    2016-01-01

    3-, 2- and 1-dimensional, particle-in-cell, fully electromagnetic simulations of electron plasma wake field acceleration in the blow out regime are presented. Earlier results are extended by (i) studying the effect of longitudinal density gradient; (ii) avoiding use of co-moving simulation box; (iii) inclusion of ion motion; and (iv) studying fully electromagnetic plasma wake fields. It is established that injecting driving and trailing electron bunches into a positive density gradient of ten-fold increasing density over 10 cm long Lithium vapor plasma, results in spatially more compact and three times larger, compared to the uniform density case, electric fields (-6.4 x 10^{10} V/m), leading to acceleration of the trailing bunch up to 24.4 GeV (starting from initial 20.4 GeV), with an energy transfer efficiencies from leading to trailing bunch of 75 percent. In the uniform density case -2.5 x 10^{10} V/m wake is created leading to acceleration of the trailing bunch up to 22.4 GeV, with an energy transfer eff...

  15. Thermodynamic, energy efficiency, and power density analysis of reverse electrodialysis power generation with natural salinity gradients.

    Science.gov (United States)

    Yip, Ngai Yin; Vermaas, David A; Nijmeijer, Kitty; Elimelech, Menachem

    2014-05-06

    Reverse electrodialysis (RED) can harness the Gibbs free energy of mixing when fresh river water flows into the sea for sustainable power generation. In this study, we carry out a thermodynamic and energy efficiency analysis of RED power generation, and assess the membrane power density. First, we present a reversible thermodynamic model for RED and verify that the theoretical maximum extractable work in a reversible RED process is identical to the Gibbs free energy of mixing. Work extraction in an irreversible process with maximized power density using a constant-resistance load is then examined to assess the energy conversion efficiency and power density. With equal volumes of seawater and river water, energy conversion efficiency of ∼ 33-44% can be obtained in RED, while the rest is lost through dissipation in the internal resistance of the ion-exchange membrane stack. We show that imperfections in the selectivity of typical ion exchange membranes (namely, co-ion transport, osmosis, and electro-osmosis) can detrimentally lower efficiency by up to 26%, with co-ion leakage being the dominant effect. Further inspection of the power density profile during RED revealed inherent ineffectiveness toward the end of the process. By judicious early discontinuation of the controlled mixing process, the overall power density performance can be considerably enhanced by up to 7-fold, without significant compromise to the energy efficiency. Additionally, membrane resistance was found to be an important factor in determining the power densities attainable. Lastly, the performance of an RED stack was examined for different membrane conductivities and intermembrane distances simulating high performance membranes and stack design. By thoughtful selection of the operating parameters, an efficiency of ∼ 37% and an overall gross power density of 3.5 W/m(2) represent the maximum performance that can potentially be achieved in a seawater-river water RED system with low

  16. Inhomogeneous radiation degradation in polymers studied with a density gradient column

    Science.gov (United States)

    Gillen, K. T.; Clough, R. L.

    Radiation dose-rate effects are known to exist in many polymers and are typically caused by oxidation reactions. Since the buildup of oxidation products often leads to an increase in polymer density, a density gradient column was used in a novel way to study the mechanisms responsible for dose-rate effects in a commercial ethylene propylene rubber (EPR) electrical cable insulation material. After various aging conditions, density profiles of samples were obtained by measuring the density of small pieces cut successively from the outside to the inside of the approximately 1-mm thick insulation. By monitoring density profiles as a function of dose rate and total radiation dose, two inhomogeneous mechanisms were found to be responsible for the observed dose-rate effects in this EPR material. At high dose rates, oxygen-diffusion-limited degradation was identified, as evidenced by a density profile which showed increased density near the air-exposed surfaces of the insulation but little change in density in the interior of the sample. As the dose rate was lowered, the oxidation region spread inward until it encompassed the entire sample at dose rates below about 100 krad/hr. The second mechanism, responsible for continuing the dose-rate effects at lower dose rates, appears to involve copper-catalyzed oxidation. This mechanism is often found to be significant in thermal aging studies; evidence that it may also be significant under room-temperature, radiation-aging conditions came from the density profile results, which revealed large increases in density as the inside of the insulation (near the tinned-copper conductor) was approached. For the same total radiation dose, this increase became larger as the dose rate was lowered. Preliminary chemical analysis profiling techniques indicate significantly enhanced copper and tin concentrations as the inside of the insulation is approached, even for insulation stripped from the metallic conductor before aging. This implies that

  17. Current Density Functional Theory Using Meta-Generalized Gradient Exchange-Correlation Functionals.

    Science.gov (United States)

    Furness, James W; Verbeke, Joachim; Tellgren, Erik I; Stopkowicz, Stella; Ekström, Ulf; Helgaker, Trygve; Teale, Andrew M

    2015-09-08

    We present the self-consistent implementation of current-dependent (hybrid) meta-generalized gradient approximation (mGGA) density functionals using London atomic orbitals. A previously proposed generalized kinetic energy density is utilized to implement mGGAs in the framework of Kohn-Sham current density functional theory (KS-CDFT). A unique feature of the nonperturbative implementation of these functionals is the ability to seamlessly explore a wide range of magnetic fields up to 1 au (∼235 kT) in strength. CDFT functionals based on the TPSS and B98 forms are investigated, and their performance is assessed by comparison with accurate coupled-cluster singles, doubles, and perturbative triples (CCSD(T)) data. In the weak field regime, magnetic properties such as magnetizabilities and nuclear magnetic resonance shielding constants show modest but systematic improvements over generalized gradient approximations (GGA). However, in the strong field regime, the mGGA-based forms lead to a significantly improved description of the recently proposed perpendicular paramagnetic bonding mechanism, comparing well with CCSD(T) data. In contrast to functionals based on the vorticity, these forms are found to be numerically stable, and their accuracy at high field suggests that the extension of mGGAs to CDFT via the generalized kinetic energy density should provide a useful starting point for further development of CDFT approximations.

  18. Noninvasive prenatal diagnosis. Use of density gradient centrifugation, magnetically activated cell sorting and in situ hybridization

    DEFF Research Database (Denmark)

    Campagnoli, C; Multhaupt, H A; Ludomirski, A;

    1997-01-01

    cells recovered did not differ. Seven of seven male pregnancies were correctly identified. One case of trisomy 21 was detected. CONCLUSION: The in situ hybridization analysis of fetal nucleated erythrocytes isolated from maternal blood using single density gradient centrifugation, anti-CD71/anti...... of the isolated cells were subjected to in situ hybridization with specific DNA probes for the Y chromosome and chromosome 21 to confirm the fetal origin. RESULTS: After MiniMACS the enrichment factors for the CD71/GPA- and CD36/GPA-positive cells from maternal blood were similar, and the percentages of fetal...

  19. Density functional theory optimized basis sets for gradient corrected functionals: 3d transition metal systems.

    Science.gov (United States)

    Calaminici, Patrizia; Janetzko, Florian; Köster, Andreas M; Mejia-Olvera, Roberto; Zuniga-Gutierrez, Bernardo

    2007-01-28

    Density functional theory optimized basis sets for gradient corrected functionals for 3d transition metal atoms are presented. Double zeta valence polarization and triple zeta valence polarization basis sets are optimized with the PW86 functional. The performance of the newly optimized basis sets is tested in atomic and molecular calculations. Excitation energies of 3d transition metal atoms, as well as electronic configurations, structural parameters, dissociation energies, and harmonic vibrational frequencies of a large number of molecules containing 3d transition metal elements, are presented. The obtained results are compared with available experimental data as well as with other theoretical data from the literature.

  20. A novel technique for real-time estimation of edge pedestal density gradients via reflectometer time delay data

    Science.gov (United States)

    Zeng, L.; Doyle, E. J.; Rhodes, T. L.; Wang, G.; Sung, C.; Peebles, W. A.; Bobrek, M.

    2016-11-01

    A new model-based technique for fast estimation of the pedestal electron density gradient has been developed. The technique uses ordinary mode polarization profile reflectometer time delay data and does not require direct profile inversion. Because of its simple data processing, the technique can be readily implemented via a Field-Programmable Gate Array, so as to provide a real-time density gradient estimate, suitable for use in plasma control systems such as envisioned for ITER, and possibly for DIII-D and Experimental Advanced Superconducting Tokamak. The method is based on a simple edge plasma model with a linear pedestal density gradient and low scrape-off-layer density. By measuring reflectometer time delays for three adjacent frequencies, the pedestal density gradient can be estimated analytically via the new approach. Using existing DIII-D profile reflectometer data, the estimated density gradients obtained from the new technique are found to be in good agreement with the actual density gradients for a number of dynamic DIII-D plasma conditions.

  1. The formulation and implementation of analytic energy gradients for periodic density functional calculations with STO/NAO Bloch basis set

    NARCIS (Netherlands)

    Kadantsev, Eugene S.; Klooster, Rob; De Boeij, Paul L.; Ziegler, Tom

    2007-01-01

    Analytic energy gradients with respect to atomic coordinates for systems with translational invariance are formulated within the framework of Kohn-Sham Density Functional Theory. The energy gradients are implemented in the BAND program for periodic DFT calculations which directly employs a Bloch bas

  2. Effect of 1 year of discontinuation of raloxifene or estrogen therapy on bone mineral density after 5 years of treatment in healthy postmenopausal women.

    Science.gov (United States)

    Neele, S J M; Evertz, R; De Valk-De Roo, G; Roos, J C; Netelenbos, J C

    2002-04-01

    The beneficial effects of hormone replacement therapy (HRT), selective estrogen receptor modulators (SERMs), or bisphosphonates in the prevention and treatment of osteoporosis in postmenopausal women have been well established. However, little is known about the effects of discontinuation of treatment on bone mineral density. We investigated the effect of 1 year of discontinuation of the SERM raloxifene (Ral; 60 mg and 150 mg), conjugated equine estrogen (CEE; 0.625 mg), and placebo after 5 years of treatment in a double-blind, randomized study. Thirty-eight of 59 healthy and hysterectomized postmenopausal women (mean age 55 years) completed the treatment and 1 year follow-up period. Lumbar spine and femoral neck bone mineral density (BMD) were performed with dual-energy X-ray absorptiometry, before, during, and at the end of treatment, as well as after 1 year of discontinuation of therapy. One year of discontinuation significantly reduced the mean lumbar spine BMD in the raloxifene- and estrogen-treated women (p protect against bone loss after 1 year of withdrawal of therapy, and that the rate of bone loss was not significantly different from that of placebo-treated women.

  3. Minimax current density gradient coils: analysis of coil performance and heating.

    Science.gov (United States)

    Poole, Michael S; While, Peter T; Lopez, Hector Sanchez; Crozier, Stuart

    2012-08-01

    Standard gradient coils are designed by minimizing the inductance or resistance for an acceptable level of gradient field nonlinearity. Recently, a new method was proposed to minimize the maximum value of the current density in a coil additionally. The stated aim of that method was to increase the minimum wire spacing and to reduce the peak temperature in a coil for fixed efficiency. These claims are tested in this study with experimental measurements of magnetic field and temperature as well as simulations of the performance of many coils. Experimental results show a 90% increase in minimum wire spacing and 40% reduction in peak temperature for equal coil efficiency and field linearity. Simulations of many more coils indicate increase in minimum wire spacing of between 50 and 340% for the coils studied here. This method is shown to be able to increase coil efficiency when constrained by minimum wire spacing rather than switching times or total power dissipation. This increase in efficiency could be used to increase gradient strength, duty cycle, or buildability.

  4. A density-adaptive SPH method with kernel gradient correction for modeling explosive welding

    Science.gov (United States)

    Liu, M. B.; Zhang, Z. L.; Feng, D. L.

    2017-05-01

    Explosive welding involves processes like the detonation of explosive, impact of metal structures and strong fluid-structure interaction, while the whole process of explosive welding has not been well modeled before. In this paper, a novel smoothed particle hydrodynamics (SPH) model is developed to simulate explosive welding. In the SPH model, a kernel gradient correction algorithm is used to achieve better computational accuracy. A density adapting technique which can effectively treat large density ratio is also proposed. The developed SPH model is firstly validated by simulating a benchmark problem of one-dimensional TNT detonation and an impact welding problem. The SPH model is then successfully applied to simulate the whole process of explosive welding. It is demonstrated that the presented SPH method can capture typical physics in explosive welding including explosion wave, welding surface morphology, jet flow and acceleration of the flyer plate. The welding angle obtained from the SPH simulation agrees well with that from a kinematic analysis.

  5. Affinity-mediated sorting order reversal of single-walled carbon nanotubes in density gradient ultracentrifugation

    Science.gov (United States)

    Jang, Myungsu; Kim, Somin; Jeong, Haneul; Ju, Sang-Yong

    2016-10-01

    Sorted single-walled carbon nanotubes (SWNTs) are of paramount importance for their utilization in high-end optoelectronic applications. Sodium cholate (SC)-based density gradient ultracentrifugation (DGU) has been instrumental in isolating small diameter (d t) SWNTs. Here, we show that SWNTs wrapped by flavin mononucleotide (FMN) as a dispersing agent are sorted in DGU, and show sorting order reversal behavior, departing from prototypical SC-SWNT trends. Larger d t SWNTs are sorted in lower density (ρ), and buoyant ρ distribution of FMN-SWNT ranges from 1.15-1.25 g cm-3. Such a nanotube layering pattern originates from both the binding affinity between FMN and SWNT and the less-susceptible hydrated volume of remote phosphate sidechains of FMN according to nanotube d t change.

  6. Vole preference of bilberry along gradients of simulated moose density and site productivity.

    Science.gov (United States)

    Pedersen, Simen; Andreassen, Harry P; Persson, Inga-Lill; Julkunen-Tiitto, Riitta; Danell, Kjell; Skarpe, Christina

    2011-12-01

    Browsing by large herbivores might either increase or decrease preference for the plant by other herbivores, depending on the plant response. Using a cafeteria test, we studied the preference by root voles (Microtus oeconomus [Pallas, 1776]) for bilberry (Vaccinium myrtillus L.) previously subjected to 4 levels of simulated moose (Alces alces [Linnaeus, 1758]) density. The different levels of moose density were simulated at population densities relevant for Fennoscandian conditions, in exclosures situated along a site productivity gradient. We expected: (i) voles to prefer bilberry from high productivity sites over low productivity sites; (ii) voles to prefer browsed bilberry, if plants allocate resources to compensatory growth or to avoid browsed bilberry if plants allocate resources to defense; (iii) these effects to increase with increasing simulated moose density; and (iv) the concentration of plant chemicals and the plant morphology to explain vole preference. Specifically, we predicted that voles would prefer: (i) plants with high nitrogen content; (ii) plants with low content of defensive substances; and (iii) tall plants with long shoots. Voles preferred bilberry from the high productivity sites compared to the low productivity sites. We also found an interaction between site productivity and simulated moose density, where voles preferred unbrowsed plants at low productivity sites and intermediate levels of browsing at high productivity sites. There was no effect of plant chemistry or morphology on vole preference. We conclude that moose browsing impacts the food preference of voles. With the current high densities of moose in Fennoscandia, this could potentially influence vole food selection and population dynamics over large geographical areas.

  7. Reproducible isolation of type II pneumocytes from fetal and adult rat lung using nycodenz density gradients.

    Science.gov (United States)

    Viscardi, R M; Ullsperger, S; Resau, J H

    1992-01-01

    Isolating fresh, relatively pure type II pneumocytes from the lung, particularly of fetal origin, is a difficult process. Separation by buoyant density gradient centrifugation has been used successfully to isolate adult type II cells. There is concern, however, that Percoll, a gradient medium that is commonly used for type II cell isolation, may be toxic to cells. We evaluated a new gradient medium, Nycodenz, that is (1) a true solution, (2) transparent, (3) not metabolized by cells, and (4) nontoxic to cells. Type II pneumocytes were isolated from 19- and 21-day gestation fetal and adult rat lung by elastase digestion and separated on preformed isotonic Nycodenz gradients (2 mL each of 27.6, 20.7, 13.8, and 4.6 (w/v) solutions). Type II pneumocytes were recovered from the density range 1.057-1.061 and identified by binding of FITC-conjugated and gold-complexed Maclura pomifera lectin. Cells derived from 19-day fetal lung contained abundant glycogen and reacted with a monoclonal antibody to the cytokeratins 8 and 18, which are markers of the fetal type II cell. Adult type II cells reacted with antibodies to cytokeratins 8, 18, and 19. Type II cell purity was 79.7 +/- 2.4%, 83.8 +/- 2.8%, and 82.6 +/- 1.8% (means +/- SEM) for 19- and 21-day gestation fetal and adult lung preparations, respectively. Cell viability was greater than 95%. The final cell yield for adult preparations was 17.8 +/- 2.7 x 10(6)/rat (means +/- SEM). To determine if the freshly isolated type II pneumocytes were functionally active, the incorporation of [3H]choline into phosphatidylcholine was measured. The percent saturation of phosphatidylcholine was high for both populations of freshly isolated cells. However, adult type II pneumocytes incorporated [3H]choline into phosphatidylcholine more rapidly than 21-day gestation fetal cells (5.97 x 10(-3) dpm/10(6) cells/h vs. 0.32 x 10(-3) dpm/10(6) cells/h, P less than .005). We have demonstrated that, using the Nycodenz isolation method, it is

  8. Sea surface density gradients in the Nordic Seas during the Holocene as revealed by paired microfossil and isotope proxies

    DEFF Research Database (Denmark)

    Van Nieuwenhove, Nicolas; Hillaire-Marcel, Claude; Bauch, Henning A.

    2016-01-01

    We attempt to assess the Holocene surface-subsurface seawater density gradient on millennial time-scale based on the reconstruction of potential density (σθ) by combining data from dinoflagellate cyst assemblages and planktic foraminiferal (Neogloboquadrina pachyderma (s)) stable oxygen isotopes (δ...

  9. Controls on stand transpiration and soil water utilization along a tree density gradient in a Neotropical savanna

    Science.gov (United States)

    Sandra J. Bucci; Fabian G. Scholz; Guillermo Goldstein; William A. Hoffmann; Frederick C. Meinzer; Augusto C. Franco; Thomas Giambelluca; Fernando Miralles-Wilhelm

    2008-01-01

    Environmental controls of stand-level tree transpiration (E) and seasonal patterns of soil water utilization were studied in five central Brazilian savanna (Cerrado) sites differing in tree density. Tree density of Cerrado vegetation in the study area consistently changes along topographic gradients from ~1,000 trees ha-1 in open savannas (campo...

  10. Emergence flux declines disproportionately to larval density along a stream metals gradient.

    Science.gov (United States)

    Schmidt, Travis S; Kraus, Johanna M; Walters, David M; Wanty, Richard B

    2013-08-01

    Effects of contaminants on adult aquatic insect emergence are less well understood than effects on insect larvae. We compared responses of larval density and adult emergence along a metal contamination gradient. Nonlinear threshold responses were generally observed for larvae and emergers. Larval densities decreased significantly at low metal concentrations but precipitously at concentrations of metal mixtures above aquatic life criteria (cumulative criterion accumulation ratio (CCAR) ≥ 1). In contrast, adult emergence declined precipitously at low metal concentrations (CCAR ≤ 1), followed by a modest decline above this threshold. Adult emergence was a more sensitive indicator of the effect of low metals concentrations on aquatic insect communities compared to larvae, presumably because emergence is limited by a combination of larval survival and other factors limiting successful emergence. Thus effects of exposure to larvae are not manifest until later in life (during metamorphosis and emergence). This loss in emergence reduces prey subsidies to riparian communities at concentrations considered safe for aquatic life. Our results also challenge the widely held assumption that adult emergence is a constant proportion of larval densities in all streams.

  11. Current Density-Functional Theory using meta-Generalized Gradient Exchange--Correlation Functionals

    CERN Document Server

    Furness, James W; Tellgren, Erik I; Stopkowicz, Stella; Ekström, Ulf; Helgaker, Trygve; Teale, Andrew M

    2015-01-01

    We present the self-consistent implementation of current-dependent (hybrid) meta generalized gradient approximation (mGGA) density functionals using London atomic orbitals. A previously proposed generalized kinetic energy density is utilized to implement mGGAs in the framework of Kohn--Sham current density-functional theory (KS-CDFT). A unique feature of the non-perturbative implementation of these functionals is the ability to seamlessly explore a wide range of magnetic fields up to 1 a.u. ($\\sim 235000$T) in strength. CDFT functionals based on the TPSS and B98 forms are investigated and their performance is assessed by comparison with accurate CCSD(T) data. In the weak field regime magnetic properties such as magnetizabilities and NMR shielding constants show modest but systematic improvements over GGA functionals. However, in strong field regime the mGGA based forms lead to a significantly improved description of the recently proposed perpendicular paramagnetic bonding mechanism, comparing well with CCSD(T...

  12. Strain energy density gradients in bone marrow predict osteoblast and osteoclast activity: a finite element study.

    Science.gov (United States)

    Webster, Duncan; Schulte, Friederike A; Lambers, Floor M; Kuhn, Gisela; Müller, Ralph

    2015-03-18

    Huiskes et al. hypothesized that mechanical strains sensed by osteocytes residing in trabecular bone dictate the magnitude of load-induced bone formation. More recently, the mechanical environment in bone marrow has also been implicated in bone׳s response to mechanical stimulation. In this study, we hypothesize that trabecular load-induced bone formation can be predicted by mechanical signals derived from an integrative µFE model, incorporating a description of both the bone and marrow phase. Using the mouse tail loading model in combination with in vivo micro-computed tomography (µCT) we tracked load induced changes in the sixth caudal vertebrae of C57BL/6 mice to quantify the amount of newly mineralized and eroded bone volumes. To identify the mechanical signals responsible for adaptation, local morphometric changes were compared to micro-finite element (µFE) models of vertebrae prior to loading. The mechanical parameters calculated were strain energy density (SED) on trabeculae at bone forming and resorbing surfaces, SED in the marrow at the boundary between bone forming and resorbing surfaces, along with SED in the trabecular bone and marrow volumes. The gradients of each parameter were also calculated. Simple regression analysis showed mean SED gradients in the trabecular bone matrix to significantly correlate with newly mineralized and eroded bone volumes R(2)=0.57 and 0.41, respectively, pbone marrow plays a significant role in determining osteoblast and osteoclast activity.

  13. DIAGNOSTIC VALUE OF DENSITY GRADIENT CENTRIFUGATION FOR EXFOLIATIVE TUMOR CELLS IN MALIGNANT PLEURAL EFFUSIONS

    Institute of Scientific and Technical Information of China (English)

    郭胤仕; 朱任之

    2004-01-01

    Objective To find out a specific method for diagnosis of malignant pleural effusions( MPEs )with higher sensitivity and practicality. Methods The diagnosis of MPEs were made using density gradient centrifugation ( DGC ) , smear cytologic examination (SCE) and pleural needle biopsy (PNB). Comparisons between these results and those of benign pleural effusions were also made. Results The positive rates of DGC,SCE and PNB for diagnosing MPEs were 94. 3% ,62.9% and 44.6% , respectively, and the positive rate of SCE combined with PNB for diagnosing MPEs was 73.2 %. The positive rate of the exfoliative tumor cells ( ETCs ) by DGC was much higher than that of SCE or/and PNB with no false-positive. Conclusion The ETCs isolated by DGC from the MPEs is quite specific for the diagnosis of malignant tumors with higher sensitivity and practicality in clinico-pathological practice.

  14. Separation of arginase isoforms by capillary zone electrophoresis and isoelectric focusing in density gradient column.

    Science.gov (United States)

    Pedrosa, M M; Legaz, M E

    1995-04-01

    Four major arginase isoforms, I, II, III and IV, have been detected in Evernia prunastri thallus. They differ in terms of both physical and biochemical properties. The isoelectric point (pI) of these proteins has been determined by both isoelectric focusing in density gradient column and high-performance capillary electrophoresis (HPCE). Isoelectric focusing revealed charge microheterogeneity for isoforms II and IV whereas arginases I and II had the same pI value of 5.8. HPCE separation confirmed this charge microheterogeneity for isoform IV but not for isoform III, and provided evidence of microheterogeneity for isoforms I and II. The effect of various electrolyte buffers and running conditions on the HPCE separation of arginase isoform were investigated. Addition of 0.5 mM spermidine (SPD) to the running buffer reduced the electroosmotic flow (EOF) and permitted discriminating between the native proteins and protein fragments.

  15. Self-injection by trapping of plasma electrons oscillating in rising density gradient at the vacuum-plasma interface

    CERN Document Server

    Sahai, Aakash A; Muggli, Patric

    2014-01-01

    We model the trapping of plasma $e^-$ within the density structures excited by a propagating energy source ($\\beta_{S}\\simeq1$) in a rising plasma density gradient. Rising density gradient leads to spatially contiguous coupled up-chirped plasmons ($d{\\omega^2_{pe}(x)}/{dx}>0$). Therefore phase mixing between plasmons can lead to trapping until the plasmon field is high enough such that $e^-$ trajectories returning towards a longer wavelength see a trapping potential. Rising plasma density gradients are ubiquitous for confining the plasma within sources at the vacuum-plasma interfaces. Therefore trapping of plasma-$e^-$ in a rising ramp is important for acceleration diagnostics and to understand the energy dissipation from the excited plasmon train \\cite{LTE-2013}. Down-ramp in density \\cite{density-transition-2001} has been used for plasma-$e^-$ trapping within the first bucket behind the driver. Here, in rising density gradient the trapping does not occur in the first plasmon bucket but in subsequent plasmon...

  16. Phase-mixing self-injection into plasma-wakefield acceleration structures driven in a rising density gradient

    Science.gov (United States)

    Sahai, Aakash Ajit

    We model the phase-mixing self-injection of electrons into plasma-wakefield acceleration structures driven in a longitudinally rising density gradient. Self-injection is the process where some of the plasma electrons lose coherence with the wave due to non-linearities. The non-linearity is inherently and intentionally induced in the plasma oscillations due to the variation of the restoring force along the rising density gradient. These electrons then get trapped in and propagate with the accelerating phase of the plasma-wave. The electron oscillations driven by matched energy-sources are shown to get trapped in the wakefields similar in scaling to the phase-mixing of free oscillations. The onset of trapping is shown to scale with the gradient of rising density and the amplitude of oscillations. The planar longitudinal electron oscillations undergo trajectory crossing above a threshold amplitude or in a density inhomogeneity leading to phase-mixing and trapping of the oscillating electrons to a phase of the wave. In this thesis, we analyze the scaling of the phase-mixing based trapping of electron oscillations, independent of a threshold, in planar geometry driven by an electron beam in a rising density gradient. The cylindrical and spherical geometry electron oscillations undergo phase-mixing irrespective of the amplitude of oscillations. Here, driven radial electron oscillations in cylindrical geometry are shown to undergo phase-mixing leading to trapping of the plasma electrons in a longitudinally rising density gradient. We also present preliminary scaling results of phase-mixing based trapping of radially oscillating electrons in a rising density gradient.

  17. Role of Density Gradient Driven Trapped Electron Modes in the H-Mode Inner Core with Electron Heating

    Science.gov (United States)

    Ernst, D.

    2015-11-01

    We present new experiments and nonlinear gyrokinetic simulations showing that density gradient driven TEM (DGTEM) turbulence dominates the inner core of H-Mode plasmas during strong electron heating. Thus α-heating may degrade inner core confinement in H-Mode plasmas with moderate density peaking. These DIII-D low torque quiescent H-mode experiments were designed to study DGTEM turbulence. Gyrokinetic simulations using GYRO (and GENE) closely match not only particle, energy, and momentum fluxes, but also density fluctuation spectra, with and without ECH. Adding 3.4 MW ECH doubles Te /Ti from 0.5 to 1.0, which halves the linear TEM critical density gradient, locally flattening the density profile. Density fluctuations from Doppler backscattering (DBS) intensify near ρ = 0.3 during ECH, displaying a band of coherent fluctuations with adjacent toroidal mode numbers. GYRO closely reproduces the DBS spectrum and its change in shape and intensity with ECH, identifying these as coherent TEMs. Prior to ECH, parallel flow shear lowers the effective nonlinear DGTEM critical density gradient 50%, but is negligible during ECH, when transport displays extreme stiffness in the density gradient. GS2 predictions show the DGTEM can be suppressed, to avoid degradation with electron heating, by broadening the current density profile to attain q0 >qmin > 1 . A related experiment in the same regime varied the electron temperature gradient in the outer half-radius (ρ ~ 0 . 65) using ECH, revealing spatially coherent 2D mode structures in the Te fluctuations measured by ECE imaging. Fourier analysis with modulated ECH finds a threshold in Te profile stiffness. Supported by the US DOE under DE-FC02-08ER54966 and DE-FC02-04ER54698.

  18. Versatile van der Waals Density Functional Based on a Meta-Generalized Gradient Approximation

    Directory of Open Access Journals (Sweden)

    Haowei Peng

    2016-10-01

    Full Text Available A “best-of-both-worlds” van der Waals (vdW density functional is constructed, seamlessly supplementing the strongly constrained and appropriately normed (SCAN meta-generalized gradient approximation for short- and intermediate-range interactions with the long-range vdW interaction from rVV10, the revised Vydrov–van Voorhis nonlocal correlation functional. The resultant SCAN+rVV10 is the only vdW density functional to date that yields excellent interlayer binding energies and spacings, as well as intralayer lattice constants in 28 layered materials. Its versatility for various kinds of bonding is further demonstrated by its good performance for 22 interactions between molecules; the cohesive energies and lattice constants of 50 solids; the adsorption energy and distance of a benzene molecule on coinage-metal surfaces; the binding energy curves for graphene on Cu(111, Ni(111, and Co(0001 surfaces; and the rare-gas solids. We argue that a good semilocal approximation should (as SCAN does capture the intermediate-range vdW through its exchange term. We have found an effective range of the vdW interaction between 8 and 16 Å for systems considered here, suggesting that this interaction is negligibly small at the larger distances where it reaches its asymptotic power-law decay.

  19. Versatile van der Waals Density Functional Based on a Meta-Generalized Gradient Approximation

    Science.gov (United States)

    Peng, Haowei; Yang, Zeng-Hui; Perdew, John P.; Sun, Jianwei

    2016-10-01

    A "best-of-both-worlds" van der Waals (vdW) density functional is constructed, seamlessly supplementing the strongly constrained and appropriately normed (SCAN) meta-generalized gradient approximation for short- and intermediate-range interactions with the long-range vdW interaction from r VV 10 , the revised Vydrov-van Voorhis nonlocal correlation functional. The resultant SCAN +r VV 10 is the only vdW density functional to date that yields excellent interlayer binding energies and spacings, as well as intralayer lattice constants in 28 layered materials. Its versatility for various kinds of bonding is further demonstrated by its good performance for 22 interactions between molecules; the cohesive energies and lattice constants of 50 solids; the adsorption energy and distance of a benzene molecule on coinage-metal surfaces; the binding energy curves for graphene on Cu(111), Ni(111), and Co(0001) surfaces; and the rare-gas solids. We argue that a good semilocal approximation should (as SCAN does) capture the intermediate-range vdW through its exchange term. We have found an effective range of the vdW interaction between 8 and 16 Å for systems considered here, suggesting that this interaction is negligibly small at the larger distances where it reaches its asymptotic power-law decay.

  20. The effect of electron beam pitch angle and density gradient on solar type III radio bursts

    CERN Document Server

    Pechhacker, Roman

    2012-01-01

    1.5D Particle-In-Cell simulations of a hot, low density electron beam injected into magnetized, maxwellian plasma were used to further explore the alternative non-gyrotropic beam driven electromagnetic emission mechanism, first studied in Tsiklauri (2011). Variation of beam injection angle and background density gradient showed that the emission process is caused by the perpendicular component of the beam injection current, whereas the parallel component only produces Langmuir waves, which play no role in the generation of EM waves in our mechanism. Particular emphasis was put on the case, where the beam is injected perpendicularly to the background magnetic field, as this turned off any electrostatic wave generation along the field and left a purely electromagnetic signal in the perpendicular components. The simulations establish the following key findings: i) Initially waves at a few w_ce/gamma are excited, mode converted and emitted at w_pe ii) The emission intensity along the beam axis is proportional to ...

  1. Analytic energy gradients for the coupled-cluster singles and doubles method with the density-fitting approximation.

    Science.gov (United States)

    Bozkaya, Uğur; Sherrill, C David

    2016-05-07

    An efficient implementation is presented for analytic gradients of the coupled-cluster singles and doubles (CCSD) method with the density-fitting approximation, denoted DF-CCSD. Frozen core terms are also included. When applied to a set of alkanes, the DF-CCSD analytic gradients are significantly accelerated compared to conventional CCSD for larger molecules. The efficiency of our DF-CCSD algorithm arises from the acceleration of several different terms, which are designated as the "gradient terms": computation of particle density matrices (PDMs), generalized Fock-matrix (GFM), solution of the Z-vector equation, formation of the relaxed PDMs and GFM, back-transformation of PDMs and GFM to the atomic orbital (AO) basis, and evaluation of gradients in the AO basis. For the largest member of the alkane set (C10H22), the computational times for the gradient terms (with the cc-pVTZ basis set) are 2582.6 (CCSD) and 310.7 (DF-CCSD) min, respectively, a speed up of more than 8-folds. For gradient related terms, the DF approach avoids the usage of four-index electron repulsion integrals. Based on our previous study [U. Bozkaya, J. Chem. Phys. 141, 124108 (2014)], our formalism completely avoids construction or storage of the 4-index two-particle density matrix (TPDM), using instead 2- and 3-index TPDMs. The DF approach introduces negligible errors for equilibrium bond lengths and harmonic vibrational frequencies.

  2. Role of density gradient driven trapped electron mode turbulence in the H-mode inner core with electron heating

    Science.gov (United States)

    Ernst, D. R.; Burrell, K. H.; Guttenfelder, W.; Rhodes, T. L.; Dimits, A. M.; Bravenec, R.; Grierson, B. A.; Holland, C.; Lohr, J.; Marinoni, A.; McKee, G. R.; Petty, C. C.; Rost, J. C.; Schmitz, L.; Wang, G.; Zemedkun, S.; Zeng, L.

    2016-05-01

    A series of DIII-D [J. L. Luxon, Nucl. Fusion 42, 614 (2002)] low torque quiescent H-mode experiments show that density gradient driven trapped electron mode (DGTEM) turbulence dominates the inner core of H-mode plasmas during strong electron cyclotron heating (ECH). Adding 3.4 MW ECH doubles Te/Ti from 0.5 to 1.0, which halves the linear DGTEM critical density gradient, locally reducing density peaking, while transport in all channels displays extreme stiffness in the density gradient. This suggests that fusion α-heating may degrade inner core confinement in H-mode plasmas with moderate density peaking and low collisionality, with equal electron and ion temperatures, key conditions expected in burning plasmas. Gyrokinetic simulations using GYRO [J. Candy and R. E. Waltz, J. Comput. Phys. 186, 545 (2003)] (and GENE [Jenko et al., Phys. Plasmas 7, 1904 (2000)]) closely match not only particle, energy, and momentum fluxes but also density fluctuation spectra from Doppler backscattering (DBS), with and without ECH. Inner core DBS density fluctuations display discrete frequencies with adjacent toroidal mode numbers, which we identify as DGTEMs. GS2 [Dorland et al., Phys. Rev. Lett. 85, 5579 (2000)] predictions show the DGTEM can be suppressed, to avoid degradation with electron heating, by broadening the current density profile to attain q0>qmin>1 .

  3. Sperm fractions obtained following density gradient centrifugation in human ejaculates show differences in sperm DNA longevity

    Institute of Scientific and Technical Information of China (English)

    Jaime Goslvez; Stephen Johnston; Carmen Lpez-Fernndez; Altea Goslbez; Francisca Arroyo; Jose Lus Fernndez; Juan G lvarez

    2014-01-01

    Objective:To investigate the DNA longevity characteristics associated with each resultant fraction following density gradient centrifugation (DGC) in comparison to that of the original neat ejaculated sample. Methods:An aliquot of neat semen (NSS) collected from 7 patients was processed using DGC resulting in 3 fractions;Fraction 1:seminal plasma/40%gradient interface (GI);Fraction 2:40%GI/80%GI;Fraction 3:80%GI/pellet. An aliquot of each fraction and NSS was cryopreserved, thawed and incubated at 37 ℃for 24h;the increase of sperm DNA fragmentation was assessed using the Dyn-Halosperm assay following 0, 3, 6 and 24h of incubation. Results:While there was a significant reduction in the incidence of baseline sperm DNA fragmentation following DGC in Fraction 3, sperm DNA longevity was shown to be higher in the NSS than in any other sub-population following incubation. The highest levels of baseline DNA damage were found in Fractions 1 and 2;these fractions also showed the highest rate DNA fragmentation following incubation, subsequently exhibiting the lowest DNA longevity. Conclusion:1) Unnecessary incubation of spermatozoa prior to artificial insemination or in vitro fertilization, should be avoided, since sperm DNA longevity is significantly reduced after ex vivo sperm handling and 2) Although sperm selection by DCG significantly reduces the baseline levels of SDF of sperm in Fraction 3, sperm DNA longevity in this fraction was ultimately lower following 24 h incubation when compared to sperm recovered from non-centrifuged NSS.

  4. Radial gradients of phase space density in the inner electron radiation

    Science.gov (United States)

    Kim, Kyung-Chan; Shprits, Yuri

    2012-12-01

    While the outer radiation belt (3.5 inner radiation belt (1.2 inner electron belt in recent years. It has been generally accepted that the equilibrium structure of radiation belt electrons is explained by the slow inward radial diffusion from a source in the outer belt and losses by Coulomb collision and wave-particle interaction. In this study, we examine this well accepted theory using the radial profiles of the phase space density (PSD), inferred from in situ measurements made by three different satellites: S3-3, CRRES, and POLAR. Our results show that electron PSD in the inner electron belt has a clear prominent local peak and negative radial gradient in the outer portion of the inner zone, i.e., decreasing PSD with increasingL-value. A likely explanation for the peaks in PSD is acceleration due to energy diffusion produced by lightning-generated and anthropogenic whistlers. These results indicate that either additional local acceleration mechanism is responsible for the formation of the inner electron belt or inner electron belt is formed by sporadic injections of electrons into the inner zone. The currently well accepted model of slow diffusion and losses will be further examined by the upcoming Radiation Belt Storm Probes (RBSP) mission.

  5. Efficient enrichment of hepatic cancer stem-like cells from a primary rat HCC model via a density gradient centrifugation-centered method.

    Directory of Open Access Journals (Sweden)

    Wei-hui Liu

    Full Text Available BACKGROUND: Because few definitive markers are available for hepatic cancer stem cells (HCSCs, based on physical rather than immunochemical properties, we applied a novel method to enrich HCSCs. METHODOLOGY: After hepatic tumor cells (HTCs were first isolated from diethylinitrosamine-induced F344 rat HCC model using percoll discontinuous gradient centrifugation (PDGC and purified via differential trypsinization and differential attachment (DTDA, they were separated into four fractions using percoll continuous gradient centrifugation (PCGC and sequentially designated as fractions I-IV (FI-IV. Morphological characteristics, mRNA and protein levels of stem cell markers, proliferative abilities, induced differentiation, in vitro migratory capacities, in vitro chemo-resistant capacities, and in vivo malignant capacities were determined for the cells of each fraction. FINDINGS: As the density of cells increased, 22.18%, 11.62%, 4.73% and 61.47% of primary cultured HTCs were segregated in FI-FIV, respectively. The cells from FIII (density between 1.041 and 1.062 g/ml displayed a higher nuclear-cytoplasmic ratio and fewer organelles and expressed higher levels of stem cell markers (AFP, EpCAM and CD133 than cells from other fractions (P<0.01. Additionally, in vitro, the cells from FIII showed a greater capacity to self-renew, differentiate into mature HTCs, transit across membranes, close scratches, and carry resistance to chemotherapy than did cells from any other fraction; in vivo, injection of only 1×10(4 cells from FIII could generate tumors not only in subcutaneous tissue but also in the livers of nude mice. CONCLUSIONS: Through our novel method, HCSC-like cells were successfully enriched in FIII. This study will greatly contribute to two important areas of biological interest: CSC isolation and HCC therapy.

  6. A comparison of density functional theory and coupled cluster methods for the calculation of electric dipole polarizability gradients of methane

    DEFF Research Database (Denmark)

    Paidarová, Ivana; Sauer, Stephan P. A.

    2012-01-01

    We have compared the performance of density functional theory (DFT) using five different exchange-correlation functionals with four coupled cluster theory based wave function methods in the calculation of geometrical derivatives of the polarizability tensor of methane. The polarizability gradient...

  7. Arrays of quasi-hexagonally ordered silica nanopillars with independently controlled areal density, diameter and height gradients

    Science.gov (United States)

    Özdemir, Burcin; Huang, Wenting; Plettl, Alfred; Ziemann, Paul

    2015-03-01

    A consecutive fabrication approach of independently tailored gradients of the topographical parameters distance, diameter and height in arrays of well-ordered nanopillars on smooth SiO2-Si-wafers is presented. For this purpose, previously reported preparation techniques are further developed and combined. First, self-assembly of Au-salt loaded micelles by dip-coating with computer-controlled pulling-out velocities and subsequent hydrogen plasma treatment produce quasi-hexagonally ordered, 2-dimensional arrays of Au nanoparticles (NPs) with unidirectional variations of the interparticle distances along the pulling direction between 50-120 nm. Second, the distance (or areal density) gradient profile received in this way is superimposed with a diameter-controlled gradient profile of the NPs applying a selective photochemical growth technique. For demonstration, a 1D shutter is used for locally defined UV exposure times to prepare Au NP size gradients varying between 12 and 30 nm. Third, these double-gradient NP arrangements serve as etching masks in a following reactive ion etching step delivering arrays of nanopillars. For height gradient generation, the etching time is locally controlled by applying a shutter made from Si wafer piece. Due to the high flexibility of the etching process, the preparation route works on various materials such as cover slips, silicon, silicon oxide, silicon nitride and silicon carbide.

  8. A model for thin layer formation by delayed particle settling at sharp density gradients

    Science.gov (United States)

    Prairie, Jennifer C.; White, Brian L.

    2017-02-01

    Thin layers - regions where plankton or particles accumulate vertically on scales of a few meters or less - are common in coastal waters, and have important implications for both trophic dynamics and carbon cycling. These features can form by a variety of biological and physical mechanisms, including localized growth, shear-thinning, and directed swimming. An additional mechanism may result in the formation of thin layers of marine aggregates, which have been shown to decrease their settling velocity when passing through sharp density gradients, a behavior termed delayed settling. Here, we apply a simple vertical advection-diffusion model to predict the properties of aggregate thin layers formed by this process. We assume a constant vertical flux of particles from the surface, which is parameterized by observations from laboratory experiments with marine aggregates. The formation, maintenance, and shape of the layers are described in relation to non-dimensional numbers that depend on environmental conditions and particle settling properties. In particular, model results demonstrate layer intensity and sharpness both increase with higher Péclet number (Pe), that is, under conditions with weaker mixing relative to layer formation. Similarly, more intense and sharper layers are found when the delayed settling behavior of aggregates is characterized by a lower velocity minimum. The model also predicts layers that are vertically asymmetric and highly "peaky" when compared with a Gaussian distribution, features often seen in thin layers in natural environments. Lastly, by comparing model predictions with observations of thin layers in the field, we are able to gain some insight into the applicability of delayed settling as a thin layer formation mechanism in different environmental conditions.

  9. Analytical gradients of the state-average complete active space self-consistent field method with density fitting

    Energy Technology Data Exchange (ETDEWEB)

    Delcey, Mickaël G. [Department of Chemistry – Ångström, The Theoretical Chemistry Programme, Uppsala University, P.O. Box 518, 751 20 Uppsala (Sweden); Pedersen, Thomas Bondo [Centre for Theoretical and Computational Chemistry, Department of Chemistry, University of Oslo, P.O. Box 1033 Blindern, 0315 Oslo (Norway); Aquilante, Francesco [Department of Chemistry – Ångström, The Theoretical Chemistry Programme, Uppsala University, P.O. Box 518, 751 20 Uppsala (Sweden); Dipartimento di chimica “G. Ciamician,” Università di Bologna, V. F. Selmi 2, 40126 Bologna (Italy); Lindh, Roland, E-mail: roland.lindh@kemi.uu.se [Department of Chemistry – Ångström, The Theoretical Chemistry Programme, Uppsala University, P.O. Box 518, 751 20 Uppsala (Sweden); Uppsala Center for Computational Chemistry - UC_3, Uppsala University, P.O. Box 518, 751 20 Uppsala (Sweden)

    2015-07-28

    An efficient implementation of the state-averaged complete active space self-consistent field (SA-CASSCF) gradients employing density fitting (DF) is presented. The DF allows a reduction both in scaling and prefactors of the different steps involved. The performance of the algorithm is demonstrated on a set of molecules ranging up to an iron-Heme b complex which with its 79 atoms and 811 basis functions is to our knowledge the largest SA-CASSCF gradient computed. For smaller systems where the conventional code could still be used as a reference, both the linear response calculation and the gradient formation showed a clear timing reduction and the overall cost of a geometry optimization is typically reduced by more than one order of magnitude while the accuracy loss is negligible.

  10. Bone mineral density in a cohort of adolescents during use of norethisterone enanthate, depot-medroxyprogesterone acetate, or combined oral contraceptives and after discontinuation of norethisterone enanthate

    Science.gov (United States)

    Beksinska, Mags E; Kleinschmidt, Immo; Smit, Jenni A; Farley, Timothy M M

    2013-01-01

    Background Depot-medroxyprogesterone acetate (DMPA), norethisterone enanthate (NET-EN) and combined oral contraceptives (COCs) have been shown to have a negative effect on bone mineral density (BMD) in adolescents. The aim of this study was to investigate BMD in 15-to 19-year-old new users of DMPA, NET-EN and COCs. Study Design This 5-year longitudinal study followed-up new users of DMPA (n=115), NET-EN (n=115), and COCs (n=116), and 144 nonuser controls. BMD was measured at the distal radius using dual x-ray absorptiometry. Results BMD increased in all groups (annual percent increase: nonusers, 1.49%; DMPA, 1.39%; NET-EN, 1.03%; COCs, 0.84%) during follow-up (p<0.001). There was evidence for lower BMD increases per annum in NET-EN (p=.050) and COC (p=.010) users compared to nonusers but no difference between DMPA and nonusers (p=.76). In 14 NET-EN discontinuers, an overall reduction of 0.61% per year BMD was followed upon cessation by an increase of 0.69% per year (p=.066). Conclusion This study suggests that BMD increases in adolescents may be less in NET-EN and COC users; however, recovery of BMD in NET-EN users was found in the small sample of adolescents followed post-discontinuation. PMID:19341845

  11. Strain gradient crystal plasticity: A continuum mechanics approach to modeling micro-structural evolution

    DEFF Research Database (Denmark)

    El-Naaman, Salim Abdallah; Nielsen, Kim Lau; Niordson, Christian Frithiof

    2015-01-01

    In agreement with dislocation theory, recent experiments show, both quantitatively and qualitatively, how geometrically necessary dislocations (GNDs) distribute in dislocation wall and cell structures. Hence, GND density fields are highly localized with large gradients and discontinuities occurring...... between the cells. This behavior is not typical for strain gradient crystal plasticity models. The present study employs a higher order extension of conventional crystal plasticity theory in which the viscous slip rate is influenced by the gradients of GND densities through a back stress...

  12. Strain gradient crystal plasticity: A continuum mechanics approach to modeling micro-structural evolution

    DEFF Research Database (Denmark)

    El-Naaman, Salim Abdallah; Nielsen, Kim Lau; Niordson, Christian Frithiof

    2015-01-01

    In agreement with dislocation theory, recent experiments show, both quantitatively and qualitatively, how geometrically necessary dislocations (GNDs) distribute in dislocation wall and cell structures. Hence, GND density fields are highly localized with large gradients and discontinuities occurring...... between the cells. This behavior is not typical for strain gradient crystal plasticity models. The present study employs a higher order extension of conventional crystal plasticity theory in which the viscous slip rate is influenced by the gradients of GND densities through a back stress...

  13. Development of gradient-corrected exchange-correlation functionals in the density functional theory; Developpement de fonctionnelles corrigees du gradient en theorie de la fonctionnelle de la densite

    Energy Technology Data Exchange (ETDEWEB)

    Lembarki, A.

    1994-12-01

    In this work, we have developed some gradient-corrected exchange-correlation functionals. This study is in keeping with the density functional theory (DFT) formalism. In the first part of this memory, a description of Hartree-Fock (HF), post-HF and density functional theories is given. The second part is devoted the study the different approximations of DFT exchange-correlation functionals which have been proposed in the last years. In particular, we have underlined the approximations used for the construction of these functionals. The third part of this memory consists in the development of new gradient-corrected functionals. In this study, we have established a new relation between exchange energy, correlation energy and kinetic energy. We have deduced two new possible forms of exchange or correlation functionals, respectively. In the fourth part, we have studied the exchange potential, for which the actual formulation does not satisfy some theoretical conditions, such as the asymptotic behavior -1/r. Our contribution lies in the development of an exchange potential with a correct asymptotic -1/r behavior for large values of r. In this chapter, we have proposed a model which permits the obtention of the exchange energy from the exchange potential, using the virial theorem. The fifth part of this memory is devoted the application of these different functionals to simple systems (H{sub 2}O, CO, N{sub 2}O, H{sub 3}{sup +} and H{sub 5}{sup +}) in order to characterize the performance of DFT calculations in regards to those obtained with post-HF methods. (author). 215 refs., 8 figs., 28 tabs.

  14. An analytical model which determines the apparent T1 for Modified Look-Locker Inversion Recovery - Analysis of the longitudinal relaxation under the influence of discontinuous balanced (classical MOLLI) and spoiled gradient echo readouts.

    Science.gov (United States)

    Kampf, Thomas; Reiter, Theresa; Bauer, Wolfgang Rudolf

    2017-08-09

    Quantitative nuclear magnetic resonance imaging (MRI) shifts more and more into the focus of clinical research. Especially determination of relaxation times without/and with contrast agents becomes the foundation of tissue characterization, e.g. in cardiac MRI for myocardial fibrosis. Techniques which assess longitudinal relaxation times rely on repetitive application of readout modules, which are interrupted by free relaxation periods, e.g. the Modified Look-Locker Inversion Recovery = MOLLI sequence. These discontinuous sequences reveal an apparent relaxation time, and, by techniques extrapolated from continuous readout sequences, a putative real T1 is determined. What is missing is a rigorous analysis of the dependence of the apparent relaxation time on its real partner, readout sequence parameters and biological parameters as heart rate. This is provided in this paper for the discontinuous balanced steady state free precession (bSSFP) and spoiled gradient echo readouts. It turns out that the apparent longitudinal relaxation rate is the time average of the relaxation rates during the readout module, and free relaxation period. Knowing the heart rate our results vice versa allow to determine the real T1 from its measured apparent partner. Copyright © 2017. Published by Elsevier GmbH.

  15. Different elution modes and field programming in gravitational field-flow fractionation: field programming using density and viscosity gradients.

    Science.gov (United States)

    Plocková, Jana; Chmelík, Josef

    2006-06-23

    In previous papers, several approaches to programming of the resulting force field in GFFF were described and investigated. The experiments were dealing with flow-velocity and channel thickness, i.e. factors influencing hydrodynamic lift forces (HLF). The potential of density and viscosity of carrier liquid for field programming was predicted and demonstrated by preliminary experiments. This work is devoted to experimental verification of the influence of carrier liquid density and viscosity. Several carrier liquid density and simultaneously viscosity gradients using water-methanol mixtures are in this work implemented in the separation of a model silica mixture. Working with the water-methanol gradients, one is not able to separate the influence of density from the contribution of viscosity. However, we found experimental conditions to show the isolated effect of carrier liquid density (two water-methanol mixtures of equal viscosity differing in their densities). In order to demonstrate the isolated effect of viscosity, we implemented in this work a new system of (hydroxypropyl)methyl cellulose (HPMC) carrier liquids. Three different HPMC compositions enabled to vary the viscosity more than two times at almost constant density. With increasing carrier liquid viscosity, the focusing and elevating trend was clearly pronounced for 5 and 10 microm silica particles. By the isolated effect of increased viscosity, the centre of the 10 microm particle zone was elevated to the streamline at 16% of the channel height. These experiments have shown that the influence of carrier liquid viscosity on HLF should be taken into account even at higher levels above the channel bottom, i.e. beyond the near-wall region. Further, it is shown that higher value of carrier liquid viscosity improves the separation of the model mixture in terms of time and resolution.

  16. Analytical nuclear excited-state gradients for the Tamm-Dancoff approximation using uncoupled frozen-density embedding.

    Science.gov (United States)

    Heuser, Johannes; Höfener, Sebastian

    2017-10-15

    We report the derivation and implementation of analytical nuclear gradients for excited states using time-dependent density functional theory using the Tamm-Dancoff approximation combined with uncoupled frozen-density embedding using density fitting. Explicit equations are presented and discussed. The implementation is able to treat singlet as well as triplet states and functionals using the local density approximation, the generalized gradient approximation, combinations with Hartree-Fock exchange (hybrids), and range-separated functionals such as CAM-B3LYP. The new method is benchmarked against supermolecule calculations in two case studies: The solvatochromic shift of the (vertical) fluorescence energy of 4-aminophthalimide on solvation, and the first local excitation of the benzonitrile dimer. Whereas for the 4-aminophthalimide-water complex deviations of about 0.2 eV are obtained to supermolecular calculations, for the benzonitrile dimer the maximum error for adiabatic excitation energies is below 0.01 eV due to a weak coupling of the subsystems. © 2017 Wiley Periodicals, Inc. © 2017 Wiley Periodicals, Inc.

  17. Structured DC Electric Fields With and Without Associated Plasma Density Gradients Observed with the C/NOFS Satellite

    Science.gov (United States)

    Pfaff, R.; Rowland, D.; Klenzing, J.; Freudenreich, H.; Bromund, K.; Liebrecht, C.; Roddy, P.; Hunton, D.

    2009-01-01

    DC electric field observations and associated plasma drifts gathered with the Vector Electric Field Investigation on the Air Force Communication/Navigation Outage Forecasting System (C/NOFS) satellite typically reveal considerable variation at large scales (approximately 100's of km), in both daytime and nighttime cases, with enhanced structures usually confined to the nightside. Although such electric field structures are typically associated with plasma density depletions and structures, as observed by the Planar Langmuir Probe on C/NOFS, what is surprising is the number of cases in which large amplitude, structured DC electric fields are observed without a significant plasma density counterpart structure, including their appearance at times when the ambient plasma density appears relatively quiescent. We investigate the relationship of such structured DC electric fields and the ambient plasma density in the C/NOFS satellite measurements observed thus far, taking into account both plasma density depletions and enhancements. We investigate the mapping of the electric fields along magnetic field lines from distant altitudes and latitudes to locations where the density structures, which presumably formed the original seat of the electric fields, are no longer discernible in the observations. In some cases, the electric field structures and spectral characteristics appear to mimic those associated with equatorial spread-F processes, providing important clues to their origins. We examine altitude, seasonal, and longitudinal effects in an effort to establish the origin of such structured DC electric fields observed both with, and without, associated plasma density gradients

  18. Correlation between density fluctuations and plasma gradients at the edge of the TORE SUPRA tokamak

    Energy Technology Data Exchange (ETDEWEB)

    Devynck, P.; Garbet, X.; Laviron, C.; Payan, J.; Haas, J. de; Clairet, F.; Talvard, M. [Association Euratom-CEA, Centre d`Etudes de Cadarache, 13 - Saint-Paul-lez-Durance (France). Dept. de Recherches sur la Fusion Controlee; Gervais, F.; Gresillon, D.; Hennequin, P.; Quemeneur, A.; Truc, A. [Ecole Polytechnique, 91 - Palaiseau (France). Lab. de Physique des Milieux Ionises

    1993-12-31

    The ALTAIR diagnostic uses scattering on the plasma electrons with the help of an IR laser beam to obtain information on the density fluctuations. This diagnostic can simultaneously record fluctuations from two independent wave numbers. Two experiments are carried out: study of the density fluctuations during strong plasma heating that combined both low hybrid waves and ion cyclotron heating; density fluctuations associated to the tokamak gas-feed modulation. 6 figs., 5 refs.

  19. [The study of the growth of tylosin producer using differential centrifugation of mycelium in a sucrose density gradient].

    Science.gov (United States)

    Salamakha, O V; Rogatykh, N P; Savochkina, I V; Tikhomirova, L A; Bazarenko, I L

    1989-01-01

    The mycelium of Streptomyces fradiae was fractionated by differential centrifugation in a sucrose density gradient (SDG) using various samples of the inoculation material and aliquots of the cultural broth taken in the course of tylosin production. The mode of mycelium distribution in SDG made it possible to select the most active inoculation material. The mycelium was redistributed from sucrose layers with a high density to those with a lower density in the course of fermentation. The fractions differed in the antibiotic activity but none of them had an activity higher than in the control centrifuged in 30% sucrose and washed off just like the fractions. Therefore, mycelium fractionation in SDG would not elevate its antibiotic activity. The paper presents the cytological characteristics of different fractions changing in the course of fermentation.

  20. Laplacian-dependent models of the kinetic energy density: Applications in subsystem density functional theory with meta-generalized gradient approximation functionals.

    Science.gov (United States)

    Śmiga, Szymon; Fabiano, Eduardo; Constantin, Lucian A; Della Sala, Fabio

    2017-02-14

    The development of semilocal models for the kinetic energy density (KED) is an important topic in density functional theory (DFT). This is especially true for subsystem DFT, where these models are necessary to construct the required non-additive embedding contributions. In particular, these models can also be efficiently employed to replace the exact KED in meta-Generalized Gradient Approximation (meta-GGA) exchange-correlation functionals allowing to extend the subsystem DFT applicability to the meta-GGA level of theory. Here, we present a two-dimensional scan of semilocal KED models as linear functionals of the reduced gradient and of the reduced Laplacian, for atoms and weakly bound molecular systems. We find that several models can perform well but in any case the Laplacian contribution is extremely important to model the local features of the KED. Indeed a simple model constructed as the sum of Thomas-Fermi KED and 1/6 of the Laplacian of the density yields the best accuracy for atoms and weakly bound molecular systems. These KED models are tested within subsystem DFT with various meta-GGA exchange-correlation functionals for non-bonded systems, showing a good accuracy of the method.

  1. Fractionation of Saprolegnia diclina (Oomycetes) satelite DNAs by AgNO3/Cs2SO4 density gradient centrifugation.

    Science.gov (United States)

    Neish, G A; Green, B R

    1977-12-14

    Saprolegnia diclina DNA has been fractionated using preparative AgNO3/Cs2SO4 and CsCl density gradients. In addition to the previously identified major satellite DNA, there are two minor DNA components banding at 1.682 and 1.701 g - cm(-3) in CsCl. Purified major satellite DNA bands at 1.707 g - cm(-3) giving a base composition of 48% G + C in good agreement with 47% G + C calculated from its Tm value. The nuclear DNA base composition is 58% G + C by both methods. The base composition of the major satellite DNA suggests that it may represent ribosomal DNA cistrons.

  2. Mapping axonal density and average diameter using non-monotonic time-dependent gradient-echo MRI

    DEFF Research Database (Denmark)

    Nunes, Daniel; Cruz, Tomás L; Jespersen, Sune N

    2017-01-01

    Abstract White Matter (WM) microstructures, such as axonal density and average diameter, are crucial to the normal function of the Central Nervous System (CNS) as they are closely related with axonal conduction velocities. Conversely, disruptions of these microstructural features may result....... While clearly further modelling and theoretical developments are necessary, we conclude that salient WM microstructural features can be extracted from these simple, SNR-efficient multi-gradient echo MRI, and that this paves the way towards easier estimation of WM microstructure in vivo....

  3. Current-source density estimation based on inversion of electrostatic forward solution: effects of finite extent of neuronal activity and conductivity discontinuities.

    Science.gov (United States)

    Pettersen, Klas H; Devor, Anna; Ulbert, Istvan; Dale, Anders M; Einevoll, Gaute T

    2006-06-30

    A new method for estimation of current-source density (CSD) from local field potentials is presented. This inverse CSD (iCSD) method is based on explicit inversion of the electrostatic forward solution and can be applied to data from multielectrode arrays with various geometries. Here, the method is applied to linear-array (laminar) electrode data. Three iCSD methods are considered: the CSD is assumed to have cylindrical symmetry and be (i) localized in infinitely thin discs, (ii) step-wise constant or (iii) continuous and smoothly varying (using cubic splines) in the vertical direction. For spatially confined CSD distributions the standard CSD method, involving a discrete double derivative, is seen in model calculations to give significant estimation errors when the lateral source dimension is comparable to the size of a cortical column (less than approximately 1 mm). Further, discontinuities in the extracellular conductivity are seen to potentially give sizable errors for even wider source distributions. The iCSD methods are seen to give excellent estimates when the correct lateral source dimension and spatial distribution of conductivity are incorporated. To illustrate the application to real data, iCSD estimates of stimulus-evoked responses measured with laminar electrodes in the rat somatosensory (barrel) cortex are compared to estimates from the standard CSD method.

  4. Up-Hill Diffusion Creating Density Gradient - What is the Proper Entropy?

    CERN Document Server

    Sato, Naoki

    2016-01-01

    It is always some constraint that yields any nontrivial structure from statistical averages. As epitomized by the Boltzmann distribution, the energy conservation is often the principal constraint acting on mechanical systems. Here, we investigate a different type: the topological constraint imposed on `space'. Such constraint emerges from the null space of the Poisson operator linking energy gradient to phase space velocity, and appears as an adiabatic invariant altering the preserved phase space volume at the core of statistical mechanics. The correct measure of entropy, built on the distorted invariant measure, behaves consistently with the second law of thermodynamics. The opposite behavior (decreasing entropy and negative entropy production) arises in arbitrary coordinates. An ensamble of rotating rigid bodies is worked out. The theory is then applied to up-hill diffusion in a magnetosphere.

  5. A process study of the interaction of tidal currents, tidal mixing and density gradients in a region of freshwater influence

    Science.gov (United States)

    Xing, Jiuxing; Chen, Shengli

    2017-08-01

    A three dimensional unstructured grid model of the west coast of Britain is used to study the process of the interaction of tidal currents, tidal mixing and density gradient in the Liverpool Bay region. Calculations with M2 tidal forcing and omitting freshwater discharge show that tidal currents in the region are strong (of order 1 ms- 1), with tidal current ellipses essentially rectilinear in the surface and bottom. In the absence of tidal forcing, the freshwater is confined to a thin surface layer. With the inclusion of tidal mixing the surface layer thickens, and in the shallow water area mixed layer occupies the whole water depth. This has a significant effect of reducing its lateral spread. A detailed study of time series of velocity, salinity and turbulence reveals that at flood tide, more saline water is advected into the coastal region and rapid vertical mixing occurs, whereas at ebb tide, fresher water is advected over more saline water. The induced strong pycnocline uncouples surface and bottom layers leading to more circular tidal ellipses which rotate in opposite directions in the vertical, as found in observations. The three dimensional nature of the model reveals that this process involves both horizontal and vertical density gradients, and shows significant horizontal variability in the Liverpool Bay region.

  6. Damping-Growth Transition for Ion-Acoustic Waves in a Density Gradient

    DEFF Research Database (Denmark)

    D'Angelo, N.; Michelsen, Poul; Pécseli, Hans

    1975-01-01

    A damping-growth transition for ion-acoustic waves propagating in a nonuniform plasma (e-folding length for the density ln) is observed at a wavelength λ∼2πln. This result supports calculations performed in connection with the problem of heating of the solar corona by ion-acoustic waves generated...

  7. Numerical Studies of Electron Acceleration Behind Self-Modulating Proton Beam in Plasma with a Density Gradient

    CERN Document Server

    Petrenko, Alexey; Sosedkin, Alexander

    2016-01-01

    Presently available high-energy proton beams in circular accelerators carry enough momentum to accelerate high-intensity electron and positron beams to the TeV energy scale over several hundred meters of the plasma with a density of about 1e15 1/cm^3. However, the plasma wavelength at this density is 100-1000 times shorter than the typical longitudinal size of the high-energy proton beam. Therefore the self-modulation instability (SMI) of a long (~10 cm) proton beam in the plasma should be used to create the train of micro-bunches which would then drive the plasma wake resonantly. Changing the plasma density profile offers a simple way to control the development of the SMI and the acceleration of particles during this process. We present simulations of the possible use of a plasma density gradient as a way to control the acceleration of the electron beam during the development of the SMI of a 400 GeV proton beam in a 10 m long plasma. This work is done in the context of the AWAKE project --- the proof-of-prin...

  8. A Study on Effects on Current Density Distribution, Inductance Gradient, and Contact Force by Variation of Armature and Rail Structure

    Energy Technology Data Exchange (ETDEWEB)

    Kim, Bok Ki [Kwangwoon University, Seoul (Korea)

    2001-02-01

    The distribution of current in the conductors influenced by armature geometry and velocity is an important parameter for determining performance of an electromagnetic launcher(EML). The electric current in the early launching stage tends to flow on the outer surface of the conductors, resulting in very high local electric current density. However, the tendency for current to concentrate on the surface is driven by the velocity skin effect later in launching stage. The high current density produces high local heating and, consequently, increases armature wear which causes several defects on EML system. This paper investigates the effect of rail/armature geometry on current density distribution, launcher inductance gradient (L'), and contact force. Three geometrical parameters are used to characterize the railgun system. These are the ratio of contact length, relative position of contact leading edge to root trailing edge, and the ratio of rail overhang to the rail height. The distribution of current density, L',contact force between various configurations of the armature and the rail are analyzed and compared by using the EMAP3D program. (author). 6 refs., 9 figs., 3 tabs.

  9. Mapping the genome of meta-generalized gradient approximation density functionals: The search for B97M-V

    Energy Technology Data Exchange (ETDEWEB)

    Mardirossian, Narbe [Kenneth S. Pitzer Center for Theoretical Chemistry, Department of Chemistry, University of California, Berkeley, California 94720 (United States); Head-Gordon, Martin, E-mail: mhg@cchem.berkeley.edu [Kenneth S. Pitzer Center for Theoretical Chemistry, Department of Chemistry, University of California, Berkeley, California 94720 (United States); Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720 (United States)

    2015-02-21

    A meta-generalized gradient approximation density functional paired with the VV10 nonlocal correlation functional is presented. The functional form is selected from more than 10{sup 10} choices carved out of a functional space of almost 10{sup 40} possibilities. Raw data come from training a vast number of candidate functional forms on a comprehensive training set of 1095 data points and testing the resulting fits on a comprehensive primary test set of 1153 data points. Functional forms are ranked based on their ability to reproduce the data in both the training and primary test sets with minimum empiricism, and filtered based on a set of physical constraints and an often-overlooked condition of satisfactory numerical precision with medium-sized integration grids. The resulting optimal functional form has 4 linear exchange parameters, 4 linear same-spin correlation parameters, and 4 linear opposite-spin correlation parameters, for a total of 12 fitted parameters. The final density functional, B97M-V, is further assessed on a secondary test set of 212 data points, applied to several large systems including the coronene dimer and water clusters, tested for the accurate prediction of intramolecular and intermolecular geometries, verified to have a readily attainable basis set limit, and checked for grid sensitivity. Compared to existing density functionals, B97M-V is remarkably accurate for non-bonded interactions and very satisfactory for thermochemical quantities such as atomization energies, but inherits the demonstrable limitations of existing local density functionals for barrier heights.

  10. Numerical studies of electron acceleration behind self-modulating proton beam in plasma with a density gradient

    Science.gov (United States)

    Petrenko, A.; Lotov, K.; Sosedkin, A.

    2016-09-01

    Presently available high-energy proton beams in circular accelerators carry enough momentum to accelerate high-intensity electron and positron beams to the TeV energy scale over several hundred meters of the plasma with a density of about 1015cm-3. However, the plasma wavelength at this density is 100-1000 times shorter than the typical longitudinal size of the high-energy proton beam. Therefore the self-modulation instability (SMI) of a long (~10 cm) proton beam in the plasma should be used to create the train of micro-bunches which would then drive the plasma wake resonantly. Changing the plasma density profile offers a simple way to control the development of the SMI and the acceleration of particles during this process. We present simulations of the possible use of a plasma density gradient as a way to control the acceleration of the electron beam during the development of the SMI of a 400 GeV proton beam in a 10 m long plasma. This work is done in the context of the AWAKE project-the proof-of-principle experiment on proton driven plasma wakefield acceleration at CERN.

  11. Horizontal Ionospheric Electron Density Gradients Observed by FORMOSAT-3/COSMIC TIP: Spatial Distributions and Effects on VLF Wave Propagation at Mid-Latitudes

    Directory of Open Access Journals (Sweden)

    Damien H. Chua

    2009-01-01

    Full Text Available We investigate the spatial variability of electron densities in the nightside ionosphere and its effects on very-low frequency (VLF wave propagation using a suite of instruments from the FORMOSAT-3/Constellation Observing System for Meteorology Ionosphere and Climate (COSMIC spacecraft.We use observations from the Tiny Ionospheric Photometer (TIP instruments to infer the horizontal electron density gradients along each satellite track. We demonstrate that the OI 1356 _ radiance measured by the TIP instruments tracks the horizontal electron density structure well with high spatial resolution and unprecedented sensitivity. Accurate measurements of the horizontal electron density gradients are important for improving retrieved electron density profiles from GPS occultation and other tomographic remote sensing techniques. The processes underlying the variability in the large-scale, nightside electron density gradients are the main drivers of ionospheric weather. TIP observations reveal significant variability in both the small and large scale structure of the nightside ionosphere. The relative intensities, relative widths, and latitudinal separation of the northern and southern ionization crests of the Appleton anomalies show a high degree of longitudinal variation.We demonstrate how the TIP observations can be used to measure the horizontal gradient of the refractive index of whistler-mode VLF waves propagating in a cold, collisionless plasma. These measurements are critical for understanding how gradients in electron density associated with ionospheric structure such as depletions and the Appleton anomalies affect VLF wave propagation through the equatorial and mid-latitude ionosphere.

  12. Highly durable superhydrophobic coatings with gradient density by movable spray method

    Science.gov (United States)

    Tenjimbayashi, Mizuki; Shiratori, Seimei

    2014-09-01

    Superhydrophobic surface is expected to be applied in anti-fouling, anti-icing, and anti-bacterial. However, practical use is interrupted by low mechanical strength, time-consuming process, and limited coating substrate. Here highly durable superhydrophobic coatings were prepared by simple and novel spraying method, which sprays with changing the "spray distance between substrate and spray" (SD), named "movable spray method." We prepared the solution that changes wettability and durability with spraying distance by mixing SiO2 nanoparticles and ethyl alpha cyanoacrylate polymer (EAC). Then, we evaluated the chemical components and surface morphologies of each spraying distance coatings (0 ˜ 50 cm) by XPS, SEM, and laser scanning microscope. It revealed that surface roughness and SiO2/EAC ratio increased as the SD increases. Thus, durable superhydrophobic coatings were designed by spraying with increasing SD gradually. Glow discharge-optical emission spectrometry analysis revealed that designed coatings showed the gradual increase of SiO2/EAC ratio. As a result, coatings prepared on glass, wood, or aluminum substrates maintained their superhydrophobicity up to the abrasion at 40 kPa. This movable spray method is simple coating by the wet process and prepares robust hydrophobic coating on complex shape and large area substrates. The gradient functional surface was found to have mechanical durability and superhydrophobicity, and wide area applications will be expected.

  13. Mapping axonal density and average diameter using non-monotonic time-dependent gradient-echo MRI

    Science.gov (United States)

    Nunes, Daniel; Cruz, Tomás L.; Jespersen, Sune N.; Shemesh, Noam

    2017-04-01

    White Matter (WM) microstructures, such as axonal density and average diameter, are crucial to the normal function of the Central Nervous System (CNS) as they are closely related with axonal conduction velocities. Conversely, disruptions of these microstructural features may result in severe neurological deficits, suggesting that their noninvasive mapping could be an important step towards diagnosing and following pathophysiology. Whereas diffusion based MRI methods have been proposed to map these features, they typically entail the application of powerful gradients, which are rarely available in the clinic, or extremely long acquisition schemes to extract information from parameter-intensive models. In this study, we suggest that simple and time-efficient multi-gradient-echo (MGE) MRI can be used to extract the axon density from susceptibility-driven non-monotonic decay in the time-dependent signal. We show, both theoretically and with simulations, that a non-monotonic signal decay will occur for multi-compartmental microstructures - such as axons and extra-axonal spaces, which were here used as a simple model for the microstructure - and that, for axons parallel to the main magnetic field, the axonal density can be extracted. We then experimentally demonstrate in ex-vivo rat spinal cords that its different tracts - characterized by different microstructures - can be clearly contrasted using the MGE-derived maps. When the quantitative results are compared against ground-truth histology, they reflect the axonal fraction (though with a bias, as evident from Bland-Altman analysis). As well, the extra-axonal fraction can be estimated. The results suggest that our model is oversimplified, yet at the same time evidencing a potential and usefulness of the approach to map underlying microstructures using a simple and time-efficient MRI sequence. We further show that a simple general-linear-model can predict the average axonal diameters from the four model parameters, and

  14. Proton acceleration using doped Argon plasma density gradient interacting with relativistic CO2 -laser pulse

    Science.gov (United States)

    Sahai, Aakash; Ettlinger, Oliver; Hicks, George; Ditter, Emma-Jane; Najmudin, Zulfikar

    2016-10-01

    We investigate proton and light-ion acceleration driven by the interaction of relativistic CO2 laser pulses with overdense Argon or other heavy-ion gas targets doped with lighter-ion species. Optically shaping the gas targets allows tuning of the pre-plasma scale-length from a few to several laser wavelengths, allowing the laser to efficiently drive a propagating snowplow through the bunching in the electron density. Preliminary PIC-based modeling shows that the lighter-ion species is accelerated even without any significant motion of the heavier ions which is a signature of the Relativistically Induced Transparency Acceleration mechanism. Some outlines of possible experiments at the TW CO2 laser at the Accelerator Test Facility at Brookhaven National Laboratory are presented.

  15. Isolation of bacterial plasmids by density gradient centrifugation in cesium trifluoroacetate (CsTFA) without the use of ethidium bromide.

    Science.gov (United States)

    Andersson, K; Hjorth, R

    1985-01-01

    Plasmids extracted from bacterial cells by alkaline extraction can easily be isolated from linear DNA by isopycnic centrifugation in CsTFA. This is a fast and simple method which circumvents the use of the intercalating dye, ethidium bromide, and consequently the problems associated with its removal. The buoyant densities for covalently closed circular DNA and linear DNA in CsTFA are 1.60 g/ml and 1.65 g/ml, respectively. The isolation is achieved regardless of plasmid size and can be accomplished at temperatures of between 4 and 30 degrees C. Plasmid DNA isolated in gradients of CsTFA are of a high purity and have been found to be intact when cleaved with restriction enzymes and ligated with T4 DNA ligase.

  16. Isolation of Plasmodium berghei ookinetes in culture using Nycodenz density gradient columns and magnetic isolation

    Directory of Open Access Journals (Sweden)

    Williams Jackie

    2003-11-01

    Full Text Available Abstract Background Large scale in vitro production of the mosquito stages of malaria parasites remains elusive, with only limited success for complete sporogonic development and only one report of development through to infective sporozoites. The initial step in this process is the production, in vitro, of ookinetes from gametocytaemic blood. Methods for isolation of these ookinetes from blood cells have been described; however, in addition to yield often being low, processing time and potential for contamination by erythrocytes remain high. Methods This study compares two procedures for retaining mature ookinetes from blood stage cultures, whilst removing red blood cells and other contaminants prior to further culture of the parasite. The well established method of isolation on Nycodenz cushions is compared with a novel method utilizing the innate magnetic properties of the haem pigment crystals found in the cytoplasm of ookinetes. Results Yield and viability of ookinetes were similar with both isolation methods. However, in our hands magnetic isolation produced a cleaner ookinete preparation much more quickly. Moreover, decreasing the flow rate through the magnetic column could further enhance the yield. Conclusion We recommend the enrichment of an ookinete preparation prior to further culture being performed using the magnetic properties of Plasmodium berghei ookinetes as an alternative to their density. The former technique is faster, removes more erythrocytes, but day-to-day costs are greater.

  17. The effects of lateral density gradients, slopes and buoyancy on channel flow: 1D analytical solutions and applications to the SE Canadian Cordillera

    Science.gov (United States)

    Gervais, Félix; Ranalli, Giorgio

    2017-08-01

    We present 1D analytical solutions for channel flow in orogens driven by various types of pressure gradients. Our calculations demonstrate that lateral density gradients in the upper crust, such as would occur across a suture zone separating arc rocks from pericratonic sediments provide a driving force for Poiseuille flow as large as topographic gradients observed in modern mountain belts. For cases for which the gradients are external (topographic and lateral density gradients) and internal (e.g. partial melting of channel material) to the channel, inclination decreases and increases the Poiseuille component of the average flow-velocity within the channel by the cosine and sine of the slope, respectively. The magnitude of the pressure gradient consequent upon the buoyancy generated by partial melting of metapelites in a channel with a 30° slope, such as would occur above an underthrusting basement ramp, is similar to that of topographic or lateral density gradients. Channel flow up a ramp could thus constitute an important exhumation mechanism in large hot orogens. Our calculations indicate that mid-crustal channel flow was a highly likely process in the Late Cretaceous-Paleocene setting of the southeastern Canadian Cordillera. The flow was first driven by the lateral density contrast between pericratonic sediments and the arc-related Intermontane terrane, then by combined effect of topographic gradient and melt-induced buoyancy of the Lower Selkirk Allochthon (part of the Shuswap Complex). Flow up the underthrusting basement ramp resulted in exhumation from mid- to upper-crustal levels. Channel flow then migrated downward to involve basement and overlying cover sequence rocks. Our results indicate that syn-convergent channel flow was a viable and very likely process in the southeastern Canadian Cordillera.

  18. Forest biomass density across large climate gradients in northern South America is related to water availability but not with temperature

    Science.gov (United States)

    Cayuela, Luis; González-Caro, Sebastián; Aldana, Ana M.; Stevenson, Pablo R.; Phillips, Oliver; Cogollo, Álvaro; Peñuela, Maria C.; von Hildebrand, Patricio; Jiménez, Eliana; Melo, Omar; Londoño-Vega, Ana Catalina; Mendoza, Irina; Velásquez, Oswaldo; Fernández, Fernando; Serna, Marcela; Velázquez-Rua, Cesar; Benítez, Doris; Rey-Benayas, José M.

    2017-01-01

    Understanding and predicting the likely response of ecosystems to climate change are crucial challenges for ecology and for conservation biology. Nowhere is this challenge greater than in the tropics as these forests store more than half the total atmospheric carbon stock in their biomass. Biomass is determined by the balance between biomass inputs (i.e., growth) and outputs (mortality). We can expect therefore that conditions that favor high growth rates, such as abundant water supply, warmth, and nutrient-rich soils will tend to correlate with high biomass stocks. Our main objective is to describe the patterns of above ground biomass (AGB) stocks across major tropical forests across climatic gradients in Northwestern South America. We gathered data from 200 plots across the region, at elevations ranging between 0 to 3400 m. We estimated AGB based on allometric equations and values for stem density, basal area, and wood density weighted by basal area at the plot-level. We used two groups of climatic variables, namely mean annual temperature and actual evapotranspiration as surrogates of environmental energy, and annual precipitation, precipitation seasonality, and water availability as surrogates of water availability. We found that AGB is more closely related to water availability variables than to energy variables. In northwest South America, water availability influences carbon stocks principally by determining stand structure, i.e. basal area. When water deficits increase in tropical forests we can expect negative impact on biomass and hence carbon storage. PMID:28301482

  19. Modelling The Effects of Density Gradients and Fluctuations on the Apparent Sizes and Positions of Low Frequency Solar Radio Sources

    Science.gov (United States)

    Alcock, Benjamin Thomas; Kontar, Eduard; Jeffrey, Natasha

    2017-08-01

    Recent high spatial and temporal resolution imaging of fast growth of the Type-III source and movement of the source centroid. In this work, we use a Monte-Carlo ray tracing simulation to model the passage of low frequency (5-240 MHz) radio waves through the solar corona from a point source, considering both isotropic and dipole emission. We model the effects of random density fluctuations and an isotropic density gradient on the transport of the rays, varying the strength of the scattering to observe the effects on images of the source from an observer at 1 AU. Absorption of photons is included, and the effects on the reproduced images and flux curves are observed. The apparent source size and centroid position are tracked through the simulation, and we find a general increase in source size with time, and a variation of centroid position in both directions throughout the simulation. We find that the size of the variation is strongly dependant upon frequency, with lower frequency sources appearing to move further on the disk than higher frequency sources. We also observe the strength of the effects at different viewing angles, finding that the greatest variation occurs closer to the solar limb. Further observational work is required to limit the scattering parameters, in order to allow for comparison with current radio images.

  20. Forest biomass density across large climate gradients in northern South America is related to water availability but not with temperature.

    Science.gov (United States)

    Álvarez-Dávila, Esteban; Cayuela, Luis; González-Caro, Sebastián; Aldana, Ana M; Stevenson, Pablo R; Phillips, Oliver; Cogollo, Álvaro; Peñuela, Maria C; von Hildebrand, Patricio; Jiménez, Eliana; Melo, Omar; Londoño-Vega, Ana Catalina; Mendoza, Irina; Velásquez, Oswaldo; Fernández, Fernando; Serna, Marcela; Velázquez-Rua, Cesar; Benítez, Doris; Rey-Benayas, José M

    2017-01-01

    Understanding and predicting the likely response of ecosystems to climate change are crucial challenges for ecology and for conservation biology. Nowhere is this challenge greater than in the tropics as these forests store more than half the total atmospheric carbon stock in their biomass. Biomass is determined by the balance between biomass inputs (i.e., growth) and outputs (mortality). We can expect therefore that conditions that favor high growth rates, such as abundant water supply, warmth, and nutrient-rich soils will tend to correlate with high biomass stocks. Our main objective is to describe the patterns of above ground biomass (AGB) stocks across major tropical forests across climatic gradients in Northwestern South America. We gathered data from 200 plots across the region, at elevations ranging between 0 to 3400 m. We estimated AGB based on allometric equations and values for stem density, basal area, and wood density weighted by basal area at the plot-level. We used two groups of climatic variables, namely mean annual temperature and actual evapotranspiration as surrogates of environmental energy, and annual precipitation, precipitation seasonality, and water availability as surrogates of water availability. We found that AGB is more closely related to water availability variables than to energy variables. In northwest South America, water availability influences carbon stocks principally by determining stand structure, i.e. basal area. When water deficits increase in tropical forests we can expect negative impact on biomass and hence carbon storage.

  1. Multiconfiguration Pair-Density Functional Theory: A Fully Translated Gradient Approximation and Its Performance for Transition Metal Dimers and the Spectroscopy of Re2Cl8(2-).

    Science.gov (United States)

    Carlson, Rebecca K; Truhlar, Donald G; Gagliardi, Laura

    2015-09-08

    We extend the on-top density functional of multiconfiguration pair-density functional theory (MC-PDFT) to include the gradient of the on-top density as well as the gradient of the density. We find that the theory is reasonably stable to this extension; furthermore, it provides improved accuracy for molecules containing transition metals. We illustrate the extended on-top density functionals by applying them to Cr2, Cu2, Ag2, Os2, and Re2Cl8(2-) as well as to our previous database of 56 data for bond dissociation energies, barrier heights, reaction energies, proton affinities, and the water dimer. The performance of MC-PDFT is comparable to or better than that of CASPT2.

  2. Energy gradients with respect to atomic positions and cell parameters for the Kohn-Sham density-functional theory at the Gamma point.

    Science.gov (United States)

    Weber, Valéry; Tymczak, Christopher J; Challacombe, Matt

    2006-06-14

    The application of theoretical methods based on density-functional theory is known to provide atomic and cell parameters in very good agreement with experimental values. Recently, construction of the exact Hartree-Fock exchange gradients with respect to atomic positions and cell parameters within the Gamma-point approximation has been introduced. In this article, the formalism is extended to the evaluation of analytical Gamma-point density-functional atomic and cell gradients. The infinite Coulomb summation is solved with an effective periodic summation of multipole tensors. While the evaluation of Coulomb and exchange-correlation gradients with respect to atomic positions are similar to those in the gas phase limit, the gradients with respect to cell parameters needs to be treated with some care. The derivative of the periodic multipole interaction tensor needs to be carefully handled in both direct and reciprocal space and the exchange-correlation energy derivative leads to a surface term that has its origin in derivatives of the integration limits that depend on the cell. As an illustration, the analytical gradients have been used in conjunction with the QUICCA algorithm to optimize one-dimensional and three-dimensional periodic systems at the density-functional theory and hybrid Hartree-Fock/density-functional theory levels. We also report the full relaxation of forsterite supercells at the B3LYP level of theory.

  3. Sucrose density gradient centrifugation and cross-flow filtration methods for the production of arbovirus antigens inactivated by binary ethylenimine

    Directory of Open Access Journals (Sweden)

    Chuan Teck F

    2004-01-01

    Full Text Available Abstract Background Sucrose density gradient centrifugation and cross-flow filtration methods have been developed and standardised for the safe and reproducible production of inactivated arbovirus antigens which are appropriate for use in diagnostic serological applications. Methods To optimise the maximum titre of growth during the propagation of arboviruses, the multiplicity of infection and choice of cell line were investigated using stocks of Ross River virus and Barmah Forest virus grown in both mosquito and mammalian cell lines. To standardise and improve the efficacy of the inactivation of arboviral suspensions, stocks of Ross River virus, Barmah Forest virus, Japanese encephalitis virus, Murray Valley encephalitis virus and Alfuy virus were chemically inactivated using binary ethylenimine at a final concentration of 3 mM. Aliquots were then taken at hourly intervals and crude inactivation rates were determined for each virus using a plaque assay. To ensure complete inactivation, the same aliquots were each passaged 3 times in Aedes albopictus C6/36 cells and the presence of viral growth was detected using an immunofluorescent assay. For larger quantities of viral suspensions, centrifugation on an isopycnic sucrose density gradient or cross-flow filtration was used to produce concentrated, pure antigens or partially concentrated, semi-purified antigens respectively. Results The results of the propagation experiments suggested that the maximum viral titres obtained for both Ross River virus and Barmah Forest virus were affected by the incubation period and choice of cell line, rather than the use of different multiplicity of infection values. Results of the binary ethylenimine inactivation trial suggested that standardised periods of 5 or 8 hours would be suitable to ensure effective and complete inactivation for a number of different arboviral antigens. Conclusion Two methods used to prepare inactivated arbovirus antigens have been

  4. Anomalous diurnal variation of atmospheric potential gradient and air-Earth current density observed at Maitri, Antarctica

    Science.gov (United States)

    Jeeva, K.; Gurubaran, S.; Williams, E. R.; Kamra, A. K.; Sinha, A. K.; Guha, A.; Selvaraj, C.; Nair, K. U.; Dhar, Ajay

    2016-11-01

    The scope of this paper is to explore the mechanisms operating over Maitri (70.76°S, 11.74°E, 117 m above mean sea level), a coastal Antarctic station, that produce an anomalous fair-weather diurnal pattern of the atmospheric electric potential gradient (PG) and air-Earth current density (AEC). The anomaly in the diurnal variations of AEC and the PG is displaying an ostensible minimum at 10 UT and a diminished response to the thunderstorm over the African continent in the 14-16 UT time frame. The data sets (2005-2014, except 2012) of the PG, and to some extent, AEC, from Maitri, are used to explore this anomaly. It follows that the fair-weather electrical phenomena over Maitri can be ascribed to global electrified convection on the one hand and to regional phenomena like convection due to the replacement of warm air by katabatic winds on the other hand. The katabatic winds originate on the polar plateau and blow from 130° at Maitri which are likely to transport various elements from the mountain slopes, and space charge from the polar plateau is expected to produce various disturbances in the PG and AEC monitored over the coastal Antarctica. This mechanism may be responsible for peaks in the early UT hours and also for the anomalous behavior of atmospheric electrical parameters observed at Maitri. Maitri data are compared with that of Carnegie cruise and Vostok to explain the source of anomaly.

  5. Sedimentation properties in density gradients correspond with levels of sperm DNA fragmentation, chromatin compaction and binding affinity to hyaluronic acid.

    Science.gov (United States)

    Torabi, Forough; Binduraihem, Adel; Miller, David

    2017-03-01

    Mature spermatozoa bind hyaluronic acid in the extracellular matrix via hyaladherins. Immature spermatozoa may be unable to interact because they do not express the appropriate hyaladherins on their surface. Fresh human semen samples were fractionated using differential density gradient centrifugation (DDGC) and the ability of these fractions to bind hyaluronic acid was evaluated. The presence of sperm hyaladherins was also assessed. CD44 was located mainly on the acrosome and equatorial segment and became more restricted to the equatorial segment in capacitated spermatozoa. Hyaluronic acid-TRITC (hyaluronic acid conjugated with tetramethylrhodamine isothiocyanante), a generic hyaluronic-acid-binding reagent, labelled the membrane and the neck region, particularly after capacitation. Sperm populations obtained after DDGC or after interaction with hyaluronic acid were assessed for DNA fragmentation and chromatin maturity. Strong relationships between both measures and sperm sedimentation and hyaluronic-acid-binding profiles were revealed. Capacitation enhanced hyaluronic acid binding of both DDGC-pelleted sperm and sperm washed free of seminal fluid. In conclusion, hyaladherins were detected on human sperm and a higher capacity for sperm hyaluronic-acid-binding was shown to correspond with their DDGC sedimentation profiles and with lower levels of DNA fragmentation and better chromatin maturity. Capacitation induced changes in the distribution and presence of hyaladherins may enhance hyaluronic-acid-binding.

  6. PFISR GPS tracking mode for researching high-latitude ionospheric electron density gradients associated with GPS scintillation

    Science.gov (United States)

    Loucks, D. C.; Palo, S. E.; Pilinski, M.; Crowley, G.; Azeem, S. I.; Hampton, D. L.

    2016-12-01

    Ionospheric behavior in the high-latitudes can significantly impact Ultra High Frequency (UHF) signals in the 300 MHz to 3 GHz band, resulting in degradation of Global Positioning System (GPS) position solutions and satellite communications interruptions. To address these operational concerns, a need arises to identify and understand the ionospheric structure that leads to disturbed conditions in the Arctic. Structures in the high-latitude ionosphere are known to change on the order of seconds or less, can be decameters to kilometers in scale, and elongate across magnetic field lines at auroral latitudes. Nominal operations at Poker Flat Incoherent Scatter Radar (PFISR) give temporal resolution on the order of minutes, and range resolution on the order of tens of kilometers, while specialized GPS receivers available for ionospheric sensing have a 100Hz observation sampling rate. One of these, ASTRA's Connected Autonomous Space Environment Sensor (CASES) is used for this study. We have developed a new GPS scintillation tracking mode for PFISR to address open scientific questions regarding temporal and spatial electron density gradients. The mode will be described, a number of experimental campaigns will be analyzed, and results and lessons learned will be presented.

  7. Space Electron Density Gradient Studies using a 3D Embedded Reconfigurable Sounder and ESA/NASA CLUSTER Mission

    Science.gov (United States)

    Dekoulis, George

    2016-07-01

    This paper provides a direct comparison between data captured by a new embedded reconfigurable digital sounder, different ground-based ionospheric sounders spread around Europe and the ESA/NASA CLUSTER mission. The CLUSTER mission consists of four identical space probes flying in a formation that allows measurements of the electron density gradient in the local magnetic field. Both the ground-based and the spacecraft instrumentations assist in studying the motion, geometry and boundaries of the plasmasphere. The comparison results are in accordance to each other. Some slight deviations among the captured data were expected from the beginning of this investigation. These small discrepancies are reasonable and seriatim analyzed. The results of this research are significant, since the level of the plasma's ionization, which is related to the solar activity, dominates the propagation of electromagnetic waves through it. Similarly, unusually high solar activity presents serious hazards to orbiting satellites, spaceborne instrumentation, satellite communications and infrastructure located on the Earth's surface. Long-term collaborative study of the data is required to continue, in order to identify and determine the enhanced risk in advance. This would allow scientists to propose an immediate cure.

  8. First-principles local density approximation (LDA)+ U and generalized gradient approximation (GGA) + U studies of plutonium oxides

    Institute of Scientific and Technical Information of China (English)

    Sun Bo; Zhang Ping

    2008-01-01

    The electronic structures and properties of PuO2 and Pu2O3 have been studied according to the first principles by using the all-electron projector-augmented-wave (PAW) method. The local density approximation (LDA)+U and the generalized gradient approximation (GGA)+U formalisms have been used to account for the strong on-site Coulomb repulsion among the localized Pu 5f electrons. We discuss how the properties of PuO2 and Pu2O3 are affected by choosing the values of U and exchange-correlation potential. Also, the oxidation reaction of Pu2O3, leading to the formation of PuO2, and its dependence on U and exchange-correlation potential have been studied. Our results show that by choosing an appropriate U it is possible to consistently describe structural, electronic, and thermodynamic properties of PuO2 and Pu2O3, which enable the modelling of the redox process involving Pu-based materials.

  9. Application of density gradient for the isolation of the fecal microbial stool component and the potential use thereof.

    Science.gov (United States)

    Hevia, Arancha; Delgado, Susana; Margolles, Abelardo; Sánchez, Borja

    2015-11-19

    The idea of considering the gut microbiota as a virtual human organ has led to the concept of fecal microbiota transplantation (FMT), which has recently been extremely successful in the treatment of cases of recurrent Clostridium difficile infection. Administration of safe, viable, and representative fecal microbiota is crucial for FMT. To our knowledge, suitable techniques and systematic conditions for separating the fecal microbiota from stool samples have not been thoroughly investigated. In this work we show the potential to separate stool microorganisms from the rest of fecal material using a procedure with a Nycodenz® density gradient, yielding 10(10) viable bacteria per two grams of feces. This procedure did not affect the original microbiota composition in terms of viability, distribution and proportions, as assessed by a phylogenetic metagenomic approach. Obtaining the fecal microbiota by concentration and separation of the microorganisms from the rest of the stool components would allow the standardization of its recovery and its long-term preservation. FMT or similar microbiota restoration therapies could be used for the treatment of several disorders, or even for aesthetic purposes, so the method described in our work may contribute to the setting of the basis for the development of safe and standardized products.

  10. Sexagem de espermatozoides bovinos por centrifugação em gradiente descontínuo de densidade de Percoll Sex selection in bovine spermatozoa by using Percoll discontinuos density gradient centrifugation

    Directory of Open Access Journals (Sweden)

    Vera Fernanda Martins Hossepian de Lima

    2011-08-01

    Full Text Available O objetivo neste trabalho foi desenvolver um método de seleção do sexo de espermatozoides bovinos por centrifugação em gradiente de densidade de Percoll. Utilizou-se sêmen congelado de touros mantidos em regime de colheita de sêmen. A fração de espermatozoides X ou Y foi separada por centrifugação em treze diferentes gradientes de densidade de Percoll formados por 1 a 12 camadas com densidades que variaram de 1,004 g/mL a 1,123 g/mL. As soluções com diferentes densidades foram preparadas misturando-se, em proporções diferentes, meio de cultura Hank's e uma solução estoque composta de NaCl 1,5 M e Percoll (1:9, v/v. Sobre cada gradiente foi colocado um total de 50 × 10(6 espermatozoides descongelados em 0,7 mL de meio Hank's e centrifugados a 250 X g por 30 minutos, em rotor horizontal, a 25°C. Os espermatozoides das frações superior e inferior foram tratados com Quinacrina Mustarda e analisados (200 deles quanto à presença do corpúsculo-F. Dos espermatozoides encontrados no sedimento de dois gradientes, compostos de 8 e 12 frações com densidades variando entre 1,050 a 1,120 g/mL e 1,044 a 1,123 g/mL, respectivamente, visualizaram-se 25% com corpúsculo-F e os 75% restantes prováveis portadores do cromossomo X. O aumento na porcentagem de espermatozoides X após a centrifugação em gradiente de densidade permitirá que esse método de sexagem seja usado em larga escala na produção comercial de carne e leite bem como no teste de progênie.The objective of this work was to develop a bovine spermatozoid sex selection method by using Percoll density gradient centrifugation. It was used frozen semen of bulls kept in semen collection regime. Fraction X or Y was separated by centrifugation in three different Percoll density gradient formed by 1 to 12 layers with densities varying from 1.004 g/mL to 1.123 g/mL. Solutions with different densities were prepared by mixing, at different proportions, Hank's culture medium and a

  11. Relativistically Induced Transparency Acceleration (RITA) of Protons and Light-ions with Ultrashort Laser Interaction with Heavy-ion Plasma Density Gradient

    CERN Document Server

    Sahai, Aakash A; Tableman, A R; Mori, W B; Katsouleas, T C

    2014-01-01

    The relativistically induced transparency acceleration (RITA) scheme of proton and ion acceleration using laser-plasma interactions is introduced, modeled, and compared to the existing schemes. Protons are accelerated with femtosecond relativistic pulses to produce quasimonoenergetic bunches with controllable peak energy. The RITA scheme works by a relativistic laser inducing transparency to densities higher than the cold-electron critical density, while the background heavy ions are stationary. The rising laser pulse creates a traveling acceleration structure at the relativistic critical density by ponderomotively driving a local electron density inflation, creating an electron snowplow and a co-propagating electrostatic potential. The snowplow advances with a velocity determined by the rate of the rise of the laser's intensity envelope and the heavy-ion-plasma density gradient scale length. The rising laser is incrementally rendered transparent to higher densities such that the relativistic-electron plasma ...

  12. Advancing biodiversity-ecosystem functioning science using high-density tree-based experiments over functional diversity gradients.

    Science.gov (United States)

    Tobner, Cornelia M; Paquette, Alain; Reich, Peter B; Gravel, Dominique; Messier, Christian

    2014-03-01

    Increasing concern about loss of biodiversity and its effects on ecosystem functioning has triggered a series of manipulative experiments worldwide, which have demonstrated a general trend for ecosystem functioning to increase with diversity. General mechanisms proposed to explain diversity effects include complementary resource use and invoke a key role for species' functional traits. The actual mechanisms by which complementary resource use occurs remain, however, poorly understood, as well as whether they apply to tree-dominated ecosystems. Here we present an experimental approach offering multiple innovative aspects to the field of biodiversity-ecosystem functioning (BEF) research. The International Diversity Experiment Network with Trees (IDENT) allows research to be conducted at several hierarchical levels within individuals, neighborhoods, and communities. The network investigates questions related to intraspecific trait variation, complementarity, and environmental stress. The goal of IDENT is to identify some of the mechanisms through which individuals and species interact to promote coexistence and the complementary use of resources. IDENT includes several implemented and planned sites in North America and Europe, and uses a replicated design of high-density tree plots of fixed species-richness levels varying in functional diversity (FD). The design reduces the space and time needed for trees to interact allowing a thorough set of mixtures varying over different diversity gradients (specific, functional, phylogenetic) and environmental conditions (e.g., water stress) to be tested in the field. The intention of this paper is to share the experience in designing FD-focused BEF experiments with trees, to favor collaborations and expand the network to different conditions.

  13. Optical properties of bulk semiconductors and graphene/boron nitride: The Bethe-Salpeter equation with derivative discontinuity-corrected density functional energies

    Science.gov (United States)

    Yan, Jun; Jacobsen, Karsten W.; Thygesen, Kristian S.

    2012-07-01

    We present an efficient implementation of the Bethe-Salpeter equation (BSE) for optical properties of materials in the projector augmented wave method Grid-based projector-augmented wave method (GPAW). Single-particle energies and wave functions are obtained from the Gritsenko, Leeuwen, Lenthe, and Baerends potential [Phys. Rev. APLRAAN1050-294710.1103/PhysRevA.51.1944 51, 1944 (1995)] with the modifications from Kuisma [Phys. Rev. BPRBMDO1098-012110.1103/PhysRevB.82.115106 82, 115106 (2010)] GLLBSC functional which explicitly includes the derivative discontinuity, is computationally inexpensive, and yields excellent fundamental gaps. Electron-hole interactions are included through the BSE using the statically screened interaction evaluated in the random phase approximation. For a representative set of semiconductors and insulators we find excellent agreement with experiments for the dielectric functions, onset of absorption, and lowest excitonic features. For the two-dimensional systems of graphene and hexagonal boron-nitride (h-BN) we find good agreement with previous many-body calculations. For the graphene/h-BN interface we find that the fundamental and optical gaps of the h-BN layer are reduced by 2.0 and 0.7 eV, respectively, compared to freestanding h-BN. This reduction is due to image charge screening which shows up in the GLLBSC calculation as a reduction (vanishing) of the derivative discontinuity.

  14. Collagen density gradient on three-dimensional printed poly(ε-caprolactone) scaffolds for interface tissue engineering.

    Science.gov (United States)

    D'Amora, Ugo; D'Este, Matteo; Eglin, David; Safari, Fatemeh; Sprecher, Christoph M; Gloria, Antonio; De Santis, Roberto; Alini, Mauro; Ambrosio, Luigi

    2017-05-09

    The ability to engineer scaffolds that resemble the transition between tissues would be beneficial to improve repair of complex organs, but has yet to be achieved. In order to mimic tissue organization, such constructs should present continuous gradients of geometry, stiffness and biochemical composition. Although the introduction of rapid prototyping or additive manufacturing techniques allows deposition of heterogeneous layers and shape control, the creation of surface chemical gradients has not been explored on three-dimensional (3D) scaffolds obtained through fused deposition modelling technique. Thus, the goal of this study was to introduce a gradient functionalization method in which a poly(ε-caprolactone) surface was first aminolysed and subsequently covered with collagen via carbodiimide reaction. The 2D constructs were characterized for their amine and collagen contents, wettability, surface topography and biofunctionality. Finally, chemical gradients were created in 3D printed scaffolds with controlled geometry and porosity. The combination of additive manufacturing and surface modification is a viable tool for the fabrication of 3D constructs with controlled structural and chemical gradients. These constructs can be employed for mimicking continuous tissue gradients for interface tissue engineering. Copyright © 2017 John Wiley & Sons, Ltd.

  15. Discontinuous symplectic capacities

    NARCIS (Netherlands)

    Zehmisch, K.; Ziltener, F.J.

    2014-01-01

    We show that the spherical capacity is discontinuous on a smooth family of ellipsoidal shells. Moreover, we prove that the shell capacity is discontinuous on a family of open sets with smooth connected boundaries.

  16. Comparative assessment of density functional methods for evaluating essential parameters to simulate SERS spectra within the excited state energy gradient approximation

    Science.gov (United States)

    Mohammadpour, Mozhdeh; Jamshidi, Zahra

    2016-05-01

    The prospect of challenges in reproducing and interpretation of resonance Raman properties of molecules interacting with metal clusters has prompted the present research initiative. Resonance Raman spectra based on the time-dependent gradient approximation are examined in the framework of density functional theory using different methods for representing the exchange-correlation functional. In this work the performance of different XC functionals in the prediction of ground state properties, excitation state energies, and gradients are compared and discussed. Resonance Raman properties based on time-dependent gradient approximation for the strongly low-lying charge transfer states are calculated and compared for different methods. We draw the following conclusions: (1) for calculating the binding energy and ground state geometry, dispersion-corrected functionals give the best performance in comparison to ab initio calculations, (2) GGA and meta GGA functionals give good accuracy in calculating vibrational frequencies, (3) excited state energies determined by hybrid and range-separated hybrid functionals are in good agreement with EOM-CCSD calculations, and (4) in calculating resonance Raman properties GGA functionals give good and reasonable performance in comparison to the experiment; however, calculating the excited state gradient by using the hybrid functional on the hessian of GGA improves the results of the hybrid functional significantly. Finally, we conclude that the agreement of charge-transfer surface enhanced resonance Raman spectra with experiment is improved significantly by using the excited state gradient approximation.

  17. Development of a vector-tensor system to measure the absolute magnetic flux density and its gradient in magnetically shielded rooms.

    Science.gov (United States)

    Voigt, J; Knappe-Grüneberg, S; Gutkelch, D; Haueisen, J; Neuber, S; Schnabel, A; Burghoff, M

    2015-05-01

    Several experiments in fundamental physics demand an environment of very low, homogeneous, and stable magnetic fields. For the magnetic characterization of such environments, we present a portable SQUID system that measures the absolute magnetic flux density vector and the gradient tensor. This vector-tensor system contains 13 integrated low-critical temperature (LTc) superconducting quantum interference devices (SQUIDs) inside a small cylindrical liquid helium Dewar with a height of 31 cm and 37 cm in diameter. The achievable resolution depends on the flux density of the field under investigation and its temporal drift. Inside a seven-layer mu-metal shield, an accuracy better than ±23 pT for the components of the static magnetic field vector and ±2 pT/cm for each of the nine components of the gradient tensor is reached by using the shifting method.

  18. A Breast Cell Atlas: Organelle analysis of the MDA-MB-231 cell line by density-gradient fractionation using isotopic marking and label-free analysis

    Directory of Open Access Journals (Sweden)

    Marianne Sandin

    2015-09-01

    Full Text Available Protein translocation between organelles in the cell is an important process that regulates many cellular functions. However, organelles can rarely be isolated to purity so several methods have been developed to analyse the fractions obtained by density gradient centrifugation. We present an analysis of the distribution of proteins amongst organelles in the human breast cell line, MDA-MB-231 using two approaches: an isotopic labelling and a label-free approach.

  19. On the formation of sharp gradients in electron density resulting from an ice-plasma feedback instabilities in the polar summer mesosphere

    Science.gov (United States)

    Yee, J.; Bahcivan, H.

    2014-12-01

    Polar Mesospheric Summer Echoes (PMSEs) have commonly been attributed to scattering from (1) volume-filled electron density turbulence and (2) extremely sharp (meter-scale) gradients in electron density. In-situ sounding rockets have measured both extended regions of turbulence as well as electron density ledges. Unlike the turbulence theory, which has been extensively studied, a theory on the formation of sharp edges has yet to be explored. In this study, we reconsider the study of Gumbel et al. [2002] on the influences of ice particles on the ion chemistry and propose a theory of ice-plasma feedback instability in order to explain the origin of sharp electron density gradients. A one-dimensional particle-in-cell simulation of a multi-constituent weakly-ionized plasma has been developed to capture the physics of proton-hydrates (H+[H20]n), ice, and plasma interactions on a spatial grid of approximately 25 m. The simulation captures (1) the development of the proton-hydrate chain starting at n=4 via Thomson's model and Natanson's recombination scheme, (2) the formation of ice nucleation on large cluster proton-hydrates (n > 73), (3) the attachment of electrons (and ions) to ice particles, and resulting depletion of the plasma density, which significantly accelerates the proton-hydrate chain and ionic nucleation of new ice particles, (4) and the development of an ice-plasma feedback instability whereby the repeated process of developing new ice particles leads to capture of even more electrons and further depletion of existing regions of lower plasma density. Since this feedback instability process is faster than typical aerosol diffusion rates in this region, existing gradients steepen to produce electron density ledges. Although ionic nucleation is not feasible as the major mesospheric nucleation process, it can become efficient locally, near the coldest parts of the mesosphere because the proton-hydrate chain development is extremely sensitive to ambient

  20. On the errors of local density (LDA) and generalized gradient (GGA) approximations to the Kohn-Sham potential and orbital energies.

    Science.gov (United States)

    Gritsenko, O V; Mentel, Ł M; Baerends, E J

    2016-05-28

    In spite of the high quality of exchange-correlation energies Exc obtained with the generalized gradient approximations (GGAs) of density functional theory, their xc potentials vxc are strongly deficient, yielding upshifts of ca. 5 eV in the orbital energy spectrum (in the order of 50% of high-lying valence orbital energies). The GGAs share this deficiency with the local density approximation (LDA). We argue that this error is not caused by the incorrect long-range asymptotics of vxc or by self-interaction error. It arises from incorrect density dependencies of LDA and GGA exchange functionals leading to incorrect (too repulsive) functional derivatives (i.e., response parts of the potentials). The vxc potential is partitioned into the potential of the xc hole vxchole (twice the xc energy density ϵxc), which determines Exc, and the response potential vresp, which does not contribute to Exc explicitly. The substantial upshift of LDA/GGA orbital energies is due to a too repulsive LDA exchange response potential vxresp (LDA) in the bulk region. Retaining the LDA exchange hole potential plus the B88 gradient correction to it but replacing the response parts of these potentials by the model orbital-dependent response potential vxresp (GLLB) of Gritsenko et al. [Phys. Rev. A 51, 1944 (1995)], which has the proper step-wise form, improves the orbital energies by more than an order of magnitude. Examples are given for the prototype molecules: dihydrogen, dinitrogen, carbon monoxide, ethylene, formaldehyde, and formic acid.

  1. High density of tree-cavities and snags in tropical dry forest of western Mexico raises questions for a latitudinal gradient.

    Directory of Open Access Journals (Sweden)

    Leopoldo Vázquez

    Full Text Available It has been suggested that a latitudinal gradient exists of a low density of snags and high density of naturally-formed tree-cavities in tropical vs. temperate forests, though few cavities may have characteristics suitable for nesting by birds. We determined snag and cavity density, characteristics, and suitability for birds in a tropical dry forest biome of western Mexico, and evaluated whether our data fits the trend of snag and cavity density typically found in tropical moist and wet forests. We established five 0.25-ha transects to survey and measure tree-cavities and snags in each of three vegetation types of deciduous, semi-deciduous, and mono-dominant Piranhea mexicana forest, comprising a total of 3.75 ha. We found a high density of 77 cavities/ha, with 37 cavities suitable for birds/ha, where density, and characteristics of cavities varied significantly among vegetation types. Lowest abundance of cavities occurred in deciduous forest, and these were in smaller trees, at a lower height, and with a narrower entrance diameter. Only 8.6% of cavities were excavated by woodpeckers, and only 11% of cavities were occupied, mainly by arthropods, though 52% of all cavities were unsuitable for birds. We also found a high density of 56 snags/ha, with greatest density in deciduous forest (70 snags/ha, though these were of significantly smaller diameter, and snags of larger diameter were more likely to contain cavities. The Chamela-Cuixmala tropical dry forest had the highest density of snags recorded for any tropical or temperate forest, and while snag density was significantly correlated with mean snag dbh, neither latitude nor mean dbh predicted snag density in ten forest sites. The high spatial aggregation of snag and cavity resources in tropical dry forest may limit their availability, particularly for large-bodied cavity adopters, and highlights the importance of habitat heterogeneity in providing resources for primary and secondary cavity-nesters.

  2. High density of tree-cavities and snags in tropical dry forest of western Mexico raises questions for a latitudinal gradient.

    Science.gov (United States)

    Vázquez, Leopoldo; Renton, Katherine

    2015-01-01

    It has been suggested that a latitudinal gradient exists of a low density of snags and high density of naturally-formed tree-cavities in tropical vs. temperate forests, though few cavities may have characteristics suitable for nesting by birds. We determined snag and cavity density, characteristics, and suitability for birds in a tropical dry forest biome of western Mexico, and evaluated whether our data fits the trend of snag and cavity density typically found in tropical moist and wet forests. We established five 0.25-ha transects to survey and measure tree-cavities and snags in each of three vegetation types of deciduous, semi-deciduous, and mono-dominant Piranhea mexicana forest, comprising a total of 3.75 ha. We found a high density of 77 cavities/ha, with 37 cavities suitable for birds/ha, where density, and characteristics of cavities varied significantly among vegetation types. Lowest abundance of cavities occurred in deciduous forest, and these were in smaller trees, at a lower height, and with a narrower entrance diameter. Only 8.6% of cavities were excavated by woodpeckers, and only 11% of cavities were occupied, mainly by arthropods, though 52% of all cavities were unsuitable for birds. We also found a high density of 56 snags/ha, with greatest density in deciduous forest (70 snags/ha), though these were of significantly smaller diameter, and snags of larger diameter were more likely to contain cavities. The Chamela-Cuixmala tropical dry forest had the highest density of snags recorded for any tropical or temperate forest, and while snag density was significantly correlated with mean snag dbh, neither latitude nor mean dbh predicted snag density in ten forest sites. The high spatial aggregation of snag and cavity resources in tropical dry forest may limit their availability, particularly for large-bodied cavity adopters, and highlights the importance of habitat heterogeneity in providing resources for primary and secondary cavity-nesters.

  3. Early and long-term impacts of browsing by roe deer in oak coppiced woods along a gradient of population density

    Directory of Open Access Journals (Sweden)

    Francesco Chianucci

    2015-01-01

    Full Text Available Over the last few decades, wild ungulate populations have exhibited relevant geographic and demographic expansion in most European countries; roe deer is amongst the most widespread ungulate species. The increasing roe deer densities have led to strong impact on forest regeneration; the problem has been recently recognized in coppice woods, a silvicultural system which is widespread in Italy, where it amounts to about 56% of the total national forested area.In this study we investigated the effect of roe deer browsing on the vegetative regeneration of Turkey oak few years after coppicing, along a gradient of roe deer density. A browsing index revealed that browsing impact was high at any given roe deer density but increased at higher density, with the browsing rate ranging from 65% to 79%. We also analyzed the long-term impact of browsing six and eleven years after coppicing under a medium roe deer density. Results indicated the early impact are not ephemeral but produced prolonged impacts through time, with an average reduction in volume of -57% and -41% six and eleven years after coppicing, respectively. Based on these results we proposed integrating browsing monitoring with roe deer density estimation to allow identifying ungulate densities which are compatible with silvicultural and forest management objectives. The proposed browsing index can be regarded as an effective management tool, on account of its simplicity and cost-effectiveness, being therefore highly suitable for routine, large scale monitoring of browsing impact.

  4. Laplacian-Level Kinetic Energy Approximations Based on the Fourth-Order Gradient Expansion: Global Assessment and Application to the Subsystem Formulation of Density Functional Theory.

    Science.gov (United States)

    Laricchia, Savio; Constantin, Lucian A; Fabiano, Eduardo; Della Sala, Fabio

    2014-01-14

    We tested Laplacian-level meta-generalized gradient approximation (meta-GGA) noninteracting kinetic energy functionals based on the fourth-order gradient expansion (GE4). We considered several well-known Laplacian-level meta-GGAs from the literature (bare GE4, modified GE4, and the MGGA functional of Perdew and Constantin (Phys. Rev. B 2007,75, 155109)), as well as two newly designed Laplacian-level kinetic energy functionals (L0.4 and L0.6). First, a general assessment of the different functionals is performed to test them for model systems (one-electron densities, Hooke's atom, and different jellium systems) and atomic and molecular kinetic energies as well as for their behavior with respect to density-scaling transformations. Finally, we assessed, for the first time, the performance of the different functionals for subsystem density functional theory (DFT) calculations on noncovalently interacting systems. We found that the different Laplacian-level meta-GGA kinetic functionals may improve the description of different properties of electronic systems, but no clear overall advantage is found over the best GGA functionals. Concerning the subsystem DFT calculations, the here-proposed L0.4 and L0.6 kinetic energy functionals are competitive with state-of-the-art GGAs, whereas all other Laplacian-level functionals fail badly. The performance of the Laplacian-level functionals is rationalized thanks to a two-dimensional reduced-gradient and reduced-Laplacian decomposition of the nonadditive kinetic energy density.

  5. Density-dependent regulation of brook trout population dynamics along a core-periphery distribution gradient in a central Appalachian watershed.

    Directory of Open Access Journals (Sweden)

    Brock M Huntsman

    Full Text Available Spatial population models predict strong density-dependence and relatively stable population dynamics near the core of a species' distribution with increasing variance and importance of density-independent processes operating towards the population periphery. Using a 10-year data set and an information-theoretic approach, we tested a series of candidate models considering density-dependent and density-independent controls on brook trout population dynamics across a core-periphery distribution gradient within a central Appalachian watershed. We sampled seven sub-populations with study sites ranging in drainage area from 1.3-60 km(2 and long-term average densities ranging from 0.335-0.006 trout/m. Modeled response variables included per capita population growth rate of young-of-the-year, adult, and total brook trout. We also quantified a stock-recruitment relationship for the headwater population and coefficients of variability in mean trout density for all sub-populations over time. Density-dependent regulation was prevalent throughout the study area regardless of stream size. However, density-independent temperature models carried substantial weight and likely reflect the effect of year-to-year variability in water temperature on trout dispersal between cold tributaries and warm main stems. Estimated adult carrying capacities decreased exponentially with increasing stream size from 0.24 trout/m in headwaters to 0.005 trout/m in the main stem. Finally, temporal variance in brook trout population size was lowest in the high-density headwater population, tended to peak in mid-sized streams and declined slightly in the largest streams with the lowest densities. Our results provide support for the hypothesis that local density-dependent processes have a strong control on brook trout dynamics across the entire distribution gradient. However, the mechanisms of regulation likely shift from competition for limited food and space in headwater streams to

  6. Formulation of a Lagrangian stochastic model of dispersion in the convective boundary layer with skewed turbulence conditions and vertical density gradient

    Science.gov (United States)

    cassiani, massimo; stohl, andreas; brioude, jerome

    2014-05-01

    The vertical gradient of air density has been included in a skewed probability density function formulation for turbulence in the convective boundary layer and the related drift term for Lagrangian stochastic particle modelling has been obtained based on the well-mixed condition. The formulation has been extended to include unsteady turbulence statistics. Tests were carried out to validate the model including consistency between forward and backward simulations and preservation of well-mixed state with unsteady conditions. The stationary state CBL drift term with density correction was incorporated in the FLEXPART/FLEXPART-WRF Lagrangian models. Currently only the steady state horizontally homogeneous drift term were included. To avoid numerical instability, using the steady homogenous drift in the presence of non-stationary and horizontally non-homogeneous conditions, a re-initialization procedure for particle velocity was used. The criteria for re-initialization and resulting errors were assessed.

  7. Measurement of deuterium density profiles in the H-mode steep gradient region using charge exchange recombination spectroscopy on DIII-D

    Science.gov (United States)

    Haskey, S. R.; Grierson, B. A.; Burrell, K. H.; Chrystal, C.; Groebner, R. J.; Kaplan, D. H.; Pablant, N. A.; Stagner, L.

    2016-11-01

    Recent completion of a thirty two channel main-ion (deuterium) charge exchange recombination spectroscopy (CER) diagnostic on the DIII-D tokamak [J. L. Luxon, Nucl. Fusion 42, 614 (2002)] enables detailed comparisons between impurity and main-ion temperature, density, and toroidal rotation. In a H-mode DIII-D discharge, these new measurement capabilities are used to provide the deuterium density profile, demonstrate the importance of profile alignment between Thomson scattering and CER diagnostics, and aid in determining the electron temperature at the separatrix. Sixteen sightlines cover the core of the plasma and another sixteen are densely packed towards the plasma edge, providing high resolution measurements across the pedestal and steep gradient region in H-mode plasmas. Extracting useful physical quantities such as deuterium density is challenging due to multiple photoemission processes. These challenges are overcome using a detailed fitting model and by forward modeling the photoemission using the FIDASIM code, which implements a comprehensive collisional radiative model.

  8. Electric field gradients of transition metal complexes from density functional theory: assessment of functionals, geometries and basis sets.

    Science.gov (United States)

    Bjornsson, Ragnar; Bühl, Michael

    2010-06-14

    Electric field gradients (EFGs) were computed for the first-row transition metal nuclei in Cr(C(6)H(6))(CO)(3), MnO(3)F, Mn(CO)(5)H, MnCp(CO)(3), Co(CO)(4)H, Co(CO)(3)(NO) and VCp(CO)(4), for which experimental gas-phase data (in form of nuclear quadrupole coupling constants) are available from microwave spectroscopy. A variety of exchange-correlation functionals were assessed, among which range-separated hybrids (such as CAM-B3LYP or LC-omegaPBE) perform best, followed by global hybrids (such as B3LYP and PBE0) and gradient-corrected functionals (such as BP86). While large basis sets are required on the metal atom for converged EFGs, smaller basis sets can be employed on the ligands. In most cases, EFGs show little sensitivity toward the geometrical parameters.

  9. Organising medication discontinuation

    DEFF Research Database (Denmark)

    Nixon, Michael; Kousgaard, Marius Brostrøm

    2016-01-01

    Background: Discontinuing medications is a complex decision making process and an important medical practice. It is a tool in reducing polypharmacy, reducing health system expenditure and improving patient quality of life. Few studies have looked at how general practitioners (GPs) discontinue...... a medication, in agreement with the patients, from a professional perspective. Three research questions were examined in this study: when does medication discontinuation occur in general practice, how is discontinuing medication handled in the GP’s practice and how do GPs make decisions about discontinuing...... medication? Methods: Twenty four GPs were interviewed using a maximum variation sample strategy. Participant observations were done in three general practices, for one day each, totalling approximately 30 consultations. Results: The results show that different discontinuation cues (related to the type...

  10. Laplacian-level kinetic energy approximations based on the fourth-order gradient expansion: Global assessment and application to the subsystem formulation of density functional theory

    CERN Document Server

    Laricchia, S; Fabiano, E; Della Sala, F

    2014-01-01

    We test Laplacian-level meta-generalized gradient approximation (meta-GGA) non-interacting kinetic energy functionals based on the fourth-order gradient expansion (GE4). We consider several well known Laplacian-level meta-GGAs from literature (bare GE4, modified GE4, and the MGGA functional of Perdew and Constantin [Phys. Rev. B \\textbf{75},155109 (2007)]), as well as two newly designed Laplacian-level kinetic energy functionals (named L0.4 and L0.6). First, a general assessment of the different functionals is performed, testing them for model systems (one-electron densities, Hooke's atom and different jellium systems), atomic and molecular kinetic energies as well as for their behavior with respect to density-scaling transformations. Finally, we assess, for the first time, the performance of the different functionals for Subsystem Density Functional Theory (DFT) calculations on non-covalently interacting systems. We find that the different Laplacian-level meta-GGA kinetic functionals may improve the descript...

  11. Derivation of general analytic gradient expressions for density-fitted post-Hartree-Fock methods: an efficient implementation for the density-fitted second-order Møller-Plesset perturbation theory.

    Science.gov (United States)

    Bozkaya, Uğur

    2014-09-28

    General analytic gradient expressions (with the frozen-core approximation) are presented for density-fitted post-HF methods. An efficient implementation of frozen-core analytic gradients for the second-order Møller-Plesset perturbation theory (MP2) with the density-fitting (DF) approximation (applying to both reference and correlation energies), which is denoted as DF-MP2, is reported. The DF-MP2 method is applied to a set of alkanes, conjugated dienes, and noncovalent interaction complexes to compare the computational cost of single point analytic gradients with MP2 with the resolution of the identity approach (RI-MP2) [F. Weigend and M. Häser, Theor. Chem. Acc. 97, 331 (1997); R. A. Distasio, R. P. Steele, Y. M. Rhee, Y. Shao, and M. Head-Gordon, J. Comput. Chem. 28, 839 (2007)]. In the RI-MP2 method, the DF approach is used only for the correlation energy. Our results demonstrate that the DF-MP2 method substantially accelerate the RI-MP2 method for analytic gradient computations due to the reduced input/output (I/O) time. Because in the DF-MP2 method the DF approach is used for both reference and correlation energies, the storage of 4-index electron repulsion integrals (ERIs) are avoided, 3-index ERI tensors are employed instead. Further, as in case of integrals, our gradient equation is completely avoid construction or storage of the 4-index two-particle density matrix (TPDM), instead we use 2- and 3-index TPDMs. Hence, the I/O bottleneck of a gradient computation is significantly overcome. Therefore, the cost of the generalized-Fock matrix (GFM), TPDM, solution of Z-vector equations, the back transformation of TPDM, and integral derivatives are substantially reduced when the DF approach is used for the entire energy expression. Further application results show that the DF approach introduce negligible errors for closed-shell reaction energies and equilibrium bond lengths.

  12. Derivation of general analytic gradient expressions for density-fitted post-Hartree-Fock methods: An efficient implementation for the density-fitted second-order Møller–Plesset perturbation theory

    Energy Technology Data Exchange (ETDEWEB)

    Bozkaya, Uğur, E-mail: ugur.bozkaya@atauni.edu.tr [Department of Chemistry, Atatürk University, Erzurum 25240, Turkey and Department of Chemistry, Middle East Technical University, Ankara 06800 (Turkey)

    2014-09-28

    General analytic gradient expressions (with the frozen-core approximation) are presented for density-fitted post-HF methods. An efficient implementation of frozen-core analytic gradients for the second-order Møller–Plesset perturbation theory (MP2) with the density-fitting (DF) approximation (applying to both reference and correlation energies), which is denoted as DF-MP2, is reported. The DF-MP2 method is applied to a set of alkanes, conjugated dienes, and noncovalent interaction complexes to compare the computational cost of single point analytic gradients with MP2 with the resolution of the identity approach (RI-MP2) [F. Weigend and M. Häser, Theor. Chem. Acc. 97, 331 (1997); R. A. Distasio, R. P. Steele, Y. M. Rhee, Y. Shao, and M. Head-Gordon, J. Comput. Chem. 28, 839 (2007)]. In the RI-MP2 method, the DF approach is used only for the correlation energy. Our results demonstrate that the DF-MP2 method substantially accelerate the RI-MP2 method for analytic gradient computations due to the reduced input/output (I/O) time. Because in the DF-MP2 method the DF approach is used for both reference and correlation energies, the storage of 4-index electron repulsion integrals (ERIs) are avoided, 3-index ERI tensors are employed instead. Further, as in case of integrals, our gradient equation is completely avoid construction or storage of the 4-index two-particle density matrix (TPDM), instead we use 2- and 3-index TPDMs. Hence, the I/O bottleneck of a gradient computation is significantly overcome. Therefore, the cost of the generalized-Fock matrix (GFM), TPDM, solution of Z-vector equations, the back transformation of TPDM, and integral derivatives are substantially reduced when the DF approach is used for the entire energy expression. Further application results show that the DF approach introduce negligible errors for closed-shell reaction energies and equilibrium bond lengths.

  13. Comparison of Conjugate Gradient Density Matrix Search and Chebyshev Expansion Methods for Avoiding Diagonalization in Large-Scale Electronic Structure Calculations

    Science.gov (United States)

    Bates, Kevin R.; Daniels, Andrew D.; Scuseria, Gustavo E.

    1998-01-01

    We report a comparison of two linear-scaling methods which avoid the diagonalization bottleneck of traditional electronic structure algorithms. The Chebyshev expansion method (CEM) is implemented for carbon tight-binding calculations of large systems and its memory and timing requirements compared to those of our previously implemented conjugate gradient density matrix search (CG-DMS). Benchmark calculations are carried out on icosahedral fullerenes from C60 to C8640 and the linear scaling memory and CPU requirements of the CEM demonstrated. We show that the CPU requisites of the CEM and CG-DMS are similar for calculations with comparable accuracy.

  14. Controllability of Discontinuous Systems

    OpenAIRE

    Veliov, V. M.; Krastanov, M.

    1988-01-01

    This report presents an approach to the local controllability problem for a discontinuous system. The approach is based on a concept of tangent vector field to a generalized dynamic system, which makes possible the differential geometry tools to be applied in the discontinuous case. Sufficient controllability conditions are derived.

  15. Relativistically induced transparency acceleration of light ions by an ultrashort laser pulse interacting with a heavy-ion-plasma density gradient

    Science.gov (United States)

    Sahai, Aakash A.; Tsung, Frank S.; Tableman, Adam R.; Mori, Warren B.; Katsouleas, Thomas C.

    2013-10-01

    The relativistically induced transparency acceleration (RITA) scheme of proton and ion acceleration using laser-plasma interactions is introduced, modeled, and compared to the existing schemes. Protons are accelerated with femtosecond relativistic pulses to produce quasimonoenergetic bunches with controllable peak energy. The RITA scheme works by a relativistic laser inducing transparency [Akhiezer and Polovin, Zh. Eksp. Teor. Fiz 30, 915 (1956); Kaw and Dawson, Phys. FluidsPFLDAS0031-917110.1063/1.1692942 13, 472 (1970); Max and Perkins, Phys. Rev. Lett.PRLTAO0031-900710.1103/PhysRevLett.27.1342 27, 1342 (1971)] to densities higher than the cold-electron critical density, while the background heavy ions are stationary. The rising laser pulse creates a traveling acceleration structure at the relativistic critical density by ponderomotively [Lindl and Kaw, Phys. FluidsPFLDAS0031-917110.1063/1.1693437 14, 371 (1971); Silva , Phys. Rev. E1063-651X10.1103/PhysRevE.59.2273 59, 2273 (1999)] driving a local electron density inflation, creating an electron snowplow and a co-propagating electrostatic potential. The snowplow advances with a velocity determined by the rate of the rise of the laser's intensity envelope and the heavy-ion-plasma density gradient scale length. The rising laser is incrementally rendered transparent to higher densities such that the relativistic-electron plasma frequency is resonant with the laser frequency. In the snowplow frame, trace density protons reflect off the electrostatic potential and get snowplowed, while the heavier background ions are relatively unperturbed. Quasimonoenergetic bunches of velocity equal to twice the snowplow velocity can be obtained and tuned by controlling the snowplow velocity using laser-plasma parameters. An analytical model for the proton energy as a function of laser intensity, rise time, and plasma density gradient is developed and compared to 1D and 2D PIC OSIRIS [Fonseca , Lect. Note Comput. Sci.9783

  16. Kohn-Sham potential with discontinuity for band gap materials

    Science.gov (United States)

    Kuisma, M.; Ojanen, J.; Enkovaara, J.; Rantala, T. T.

    2010-09-01

    We model a Kohn-Sham potential with the discontinuity at integer particle numbers starting from the approximation by (GLLB) Gritsenko [Phys. Rev. A 51, 1944 (1995)10.1103/PhysRevA.51.1944]. We evaluate the Kohn-Sham gap and the discontinuity to obtain the quasiparticle gap. This allows us to compare the Kohn-Sham gaps to those obtained by accurate many-body perturbation-theory-based optimized potential methods. In addition, the resulting quasiparticle band gap is compared to experimental gaps. In the GLLB model potential, the exchange-correlation hole is modeled using a generalized gradient approximation (GGA) energy density and the response of the hole-to-density variations is evaluated by using the common-denominator approximation and homogeneous electron-gas-based assumptions. In our modification, we have chosen the PBEsol potential as the GGA to model the exchange hole and add a consistent correlation potential. The method is implemented in the GPAW code, which allows efficient parallelization to study large systems. A fair agreement for Kohn-Sham and the quasiparticle band gaps with semiconductors and other band gap materials is obtained with a potential which is as fast as GGA to calculate.

  17. Assessment of density functional theory optimized basis sets for gradient corrected functionals to transition metal systems: the case of small Nin (n

    Science.gov (United States)

    López Arvizu, Gregorio; Calaminici, Patrizia

    2007-05-21

    Density functional calculations have been performed for small nickel clusters, Ni(n), Ni(n) (+), and Ni(n)(-) (ntheory approach. Newly developed nickel all-electron basis sets optimized for generalized gradient approximation (GGA) as well as an all-electron basis set optimized for the local density approximation were employed. For both neutral and charged systems, several isomers and different multiplicities were studied in order to determine the lowest energy structures. A vibrational analysis was performed in order to characterize these isomers. Structural parameters, harmonic frequencies, binding energies, ionization potentials, and electron affinities are reported. This work shows that the employed GGA basis sets for the nickel atom are important for the correct prediction of the ground state structures of small nickel clusters and that the structural assignment of these systems can be performed, with a good resolution, over the ionization potential.

  18. 密度梯度碳/碳复合材料的制备及性能%Preparation and Properties of Density Gradient Carbon/Carbon Composites

    Institute of Scientific and Technical Information of China (English)

    陈强; 张守阳

    2011-01-01

    采用强制流动热梯度化学气相渗透法在1000~1250℃制备了密度梯度碳/碳复合材料;借助三点弯曲试验和激光闪烁法测定了复合材料的弯曲性能与导热系数,用偏光显微镜及扫描电子显微镜观察了基体热解碳的组织结构及断口形貌。结果表明:该复合材料上层的最大密度为1.65g·cm^-3,下层的最小密度为1.10g·cm^-3,具有明显的密度梯度;复合材料的密度越大,抗弯强度越高;其导热系数也随密度的增加而增大;沉积温度是影响基体热解碳组织的主要因素,高温有利于粗糙层热解碳的生成,而低温有利于光滑层热解碳的生成。%Density gradient carbon/carbon composites were infiltrated using forced flow thermal gradient chemical vapor infiltration in the range of 1 000- 1 250℃. Flexural strength and thermal conductivity were determined by 3 point bending test and laser flashing method. Mierostructure of deposited pyrolytic carbon and morphology of fracture surface were observed by polarized light microscopy and scanning electron microscopy. The results show that maximal density of upper part of the composites was 1.65 g · cm^-3 , while miniumum density of bottom part was 1. 10 g ·em^-3 , and obvions density gradient was found. Flexural strength and coefficient of thermal conductivity increased with the increase of density of the composites. The deposition temperature had a great impact on the mierostrueture of the pyolytic carbon. A higher temperature was favourable for the formation of rough layer hydrocarbon, while a lower temperature was favourable for the formation of smooth layer hydrocarbon.

  19. Adaptive local basis set for Kohn-Sham density functional theory in a discontinuous Galerkin framework II: Force, vibration, and molecular dynamics calculations

    CERN Document Server

    Zhang, Gaigong; Hu, Wei; Yang, Chao; Pask, John E

    2015-01-01

    Recently, we have proposed the adaptive local basis set for electronic structure calculations based on Kohn-Sham density functional theory in a pseudopotential framework. The adaptive local basis set is efficient and systematically improvable for total energy calculations. In this paper, we present the calculation of atomic forces, which can be used for a range of applications such as geometry optimization and molecular dynamics simulation. We demonstrate that, under mild assumptions, the computation of atomic forces can scale nearly linearly with the number of atoms in the system using the adaptive local basis set. We quantify the accuracy of the Hellmann-Feynman forces for a range of physical systems, benchmarked against converged planewave calculations, and find that the adaptive local basis set is efficient for both force and energy calculations, requiring at most a few tens of basis functions per atom to attain accuracy required in practice. Since the adaptive local basis set has implicit dependence on a...

  20. Lagrangian Stochastic Modelling of Dispersion in the Convective Boundary Layer with Skewed Turbulence Conditions and a Vertical Density Gradient: Formulation and Implementation in the FLEXPART Model

    Science.gov (United States)

    Cassiani, Massimo; Stohl, Andreas; Brioude, Jerome

    2015-03-01

    A correction for the vertical gradient of air density has been incorporated into a skewed probability density function formulation for turbulence in the convective boundary layer. The related drift term for Lagrangian stochastic dispersion modelling has been derived based on the well-mixed condition. Furthermore, the formulation has been extended to include unsteady turbulence statistics and the related additional component of the drift term obtained. These formulations are an extension of the drift formulation reported by Luhar et al. (Atmos Environ 30:1407-1418, 1996) following the well-mixed condition proposed by Thomson (J Fluid Mech 180:529-556, 1987). Comprehensive tests were carried out to validate the formulations including consistency between forward and backward simulations and preservation of a well-mixed state with unsteady conditions. The stationary state CBL drift term with density correction was incorporated into the FLEXPART and FLEXPART-WRF Lagrangian models, and included the use of an ad hoc transition function that modulates the third moment of the vertical velocity based on stability parameters. Due to the current implementation of the FLEXPART models, only a steady-state horizontally homogeneous drift term could be included. To avoid numerical instability, in the presence of non-stationary and horizontally inhomogeneous conditions, a re-initialization procedure for particle velocity was used. The criteria for re-initialization and resulting errors were assessed for the case of non-stationary conditions by comparing a reference numerical solution in simplified unsteady conditions, obtained using the non-stationary drift term, and a solution based on the steady drift with re-initialization. Two examples of "real-world" numerical simulations were performed under different convective conditions to demonstrate the effect of the vertical gradient in density on the particle dispersion in the CBL.

  1. On the errors of local density (LDA) and generalized gradient (GGA) approximations to the Kohn-Sham potential and orbital energies

    Science.gov (United States)

    Gritsenko, O. V.; Mentel, Ł. M.; Baerends, E. J.

    2016-05-01

    In spite of the high quality of exchange-correlation energies Exc obtained with the generalized gradient approximations (GGAs) of density functional theory, their xc potentials vxc are strongly deficient, yielding upshifts of ca. 5 eV in the orbital energy spectrum (in the order of 50% of high-lying valence orbital energies). The GGAs share this deficiency with the local density approximation (LDA). We argue that this error is not caused by the incorrect long-range asymptotics of vxc or by self-interaction error. It arises from incorrect density dependencies of LDA and GGA exchange functionals leading to incorrect (too repulsive) functional derivatives (i.e., response parts of the potentials). The vxc potential is partitioned into the potential of the xc hole vxchole (twice the xc energy density ɛxc), which determines Exc, and the response potential vresp, which does not contribute to Exc explicitly. The substantial upshift of LDA/GGA orbital energies is due to a too repulsive LDA exchange response potential vxresp L D A in the bulk region. Retaining the LDA exchange hole potential plus the B88 gradient correction to it but replacing the response parts of these potentials by the model orbital-dependent response potential vxresp G L L B of Gritsenko et al. [Phys. Rev. A 51, 1944 (1995)], which has the proper step-wise form, improves the orbital energies by more than an order of magnitude. Examples are given for the prototype molecules: dihydrogen, dinitrogen, carbon monoxide, ethylene, formaldehyde, and formic acid.

  2. Comparative validation using quantitative real-time PCR (qPCR and conventional PCR of bovine semen centrifuged in continuous density gradient

    Directory of Open Access Journals (Sweden)

    M.V. Resende

    2011-06-01

    Full Text Available The objective of the present study was to determine the sperm enrichment with X-bearing spermatozoa, after one centrifugation in a Percoll or OptiPrep continuous density gradient, using quantitative real-time polymerase chain reaction (qPCR of sperm DNA and resultant in vitro-produced bovine embryos by PCR. Frozen/thawed sperm was layered on density gradients and the tubes were centrifuged. Supernatants were gently aspirated and the sperm recovered from the bottom of the tubes. Cleavage and blastocyst rates were determined through in vitro production of embryos and PCR was performed to identify the embryos' genetic sex. A difference in blastocyst rate was found in the Percoll treatment compared to OptiPrep (P<0.05. The percentage of female embryos in the Percoll and OptiPrep groups was 62.0% and 47.1%, respectively. These results were confirmed by qPCR of spermatozoa DNA and underestimation was seen only in the Percoll group. It was possible to sexing sperm using simple approach.

  3. Electron cyclotron maser emission mode coupling to the z-mode on a longitudinal density gradient in the context of solar type III bursts

    CERN Document Server

    Pechhacker, Roman

    2012-01-01

    A beam of super-thermal, hot electrons was injected into maxwellian plasma with a density gradient along a magnetic field line. 1.5D particle-in-cell simulations were carried out which established that the EM emission is produced by the perpendicular component of the beam injection momentum. The beam has a positive slope in the distribution function in perpendicular momentum phase space, which is the characteristic feature of a cyclotron maser. The cyclotron maser in the overdense plasma generates emission at the electron cyclotron frequency. The frequencies of generated waves were too low to propagate away from the injection region, hence the wavelet transform shows a pulsating wave generation and decay process. The intensity pulsation frequency is twice the relativistic cyclotron frequency. Eventually, a stable wave packet formed and could mode couple on the density gradient to reach frequencies of the order of the plasma frequency, that allowed for propagation. The emitted wave is likely to be a z-mode wav...

  4. Density-Gradient Mediated Band Extraction of Leukocytes from Whole Blood Using Centrifugo-Pneumatic Siphon Valving on Centrifugal Microfluidic Discs.

    Directory of Open Access Journals (Sweden)

    David J Kinahan

    Full Text Available Here we present retrieval of Peripheral Blood Mononuclear Cells by density-gradient medium based centrifugation for subsequent analysis of the leukocytes on an integrated microfluidic "Lab-on-a-Disc" cartridge. Isolation of white blood cells constitutes a critical sample preparation step for many bioassays. Centrifugo-pneumatic siphon valves are particularly suited for blood processing as they function without need of surface treatment and are 'low-pass', i.e., holding at high centrifugation speeds and opening upon reduction of the spin rate. Both 'hydrostatically' and 'hydrodynamically' triggered centrifugo-pneumatic siphon valving schemes are presented. Firstly, the geometry of the pneumatic chamber of hydrostatically primed centrifugo-pneumatic siphon valves is optimised to enable smooth and uniform layering of blood on top of the density-gradient medium; this feature proves to be key for efficient Peripheral Blood Mononuclear Cell extraction. A theoretical analysis of hydrostatically primed valves is also presented which determines the optimum priming pressure for the individual valves. Next, 'dual siphon' configurations for both hydrostatically and hydrodynamically primed centrifugo-pneumatic siphon valves are introduced; here plasma and Peripheral Blood Mononuclear Cells are extracted through a distinct siphon valve. This work represents a first step towards enabling on disc multi-parameter analysis. Finally, the efficiency of Peripheral Blood Mononuclear Cells extraction in these structures is characterised using a simplified design. A microfluidic mechanism, which we termed phase switching, is identified which affects the efficiency of Peripheral Blood Mononuclear Cell extraction.

  5. Density gradient multilayered polymerization (DGMP): a novel technique for creating multi-compartment, customizable scaffolds for tissue engineering.

    Science.gov (United States)

    Joshi-Barr, Shivanjali; Karpiak, Jerome V; Ner, Yogesh; Wen, Jessica H; Engler, Adam J; Almutairi, Adah

    2013-02-12

    Complex tissue culture matrices, in which types and concentrations of biological stimuli (e.g. growth factors, inhibitors, or small molecules) or matrix structure (e.g. composition, concentration, or stiffness of the matrix) vary over space, would enable a wide range of investigations concerning how these variables affect cell differentiation, migration, and other phenomena. The major challenge in creating layered matrices is maintaining the structural integrity of layer interfaces without diffusion of individual components from each layer. Current methodologies to achieve this include photopatterning, lithography, sequential functionalization5, freeze drying, microfluidics, or centrifugation, many of which require sophisticated instrumentation and technical skills. Others rely on sequential attachment of individual layers, which may lead to delamination of layers. DGMP overcomes these issues by using an inert density modifier such as iodixanol to create layers of varying densities. Since the density modifier can be mixed with any prepolymer or bioactive molecule, DGMP allows each scaffold layer to be customized. Simply varying the concentration of the density modifier prevents mixing of adjacent layers while they remain aqueous. Subsequent single step polymerization gives rise to a structurally continuous multilayered scaffold, in which each layer has distinct chemical and mechanical properties. The density modifier can be easily removed with sufficient rinsing without perturbation of the individual layers or their components. This technique is therefore well suited for creating hydrogels of various sizes, shapes, and materials. A protocol for fabricating a 2D-polyethylene glycol (PEG) gel, in which alternating layers incorporate RGDS-350, is outlined below. We use PEG because it is biocompatible and inert. RGDS, a cell adhesion peptide, is used to demonstrate spatial restriction of a biological cue, and the conjugation of a fluorophore (Alexa Fluor 350) enables

  6. How Do Vegetation Density and Transportation Network Density Affect Crime across an Urban Central-Peripheral Gradient? A Case Study in Kitchener—Waterloo, Ontario

    Directory of Open Access Journals (Sweden)

    Yikang Du

    2016-07-01

    Full Text Available The relationship between vegetation, transportation networks, and crime has been under debate. Vegetation has been positively correlated with fear of crime; however, the actual correlation between vegetation and occurrences of crime is uncertain. Transportation networks have also been connected with crime occurrence but their impact on crime tends to vary over different circumstances. By conducting spatial analyses, this study explores the associations between crime and vegetation as well as transportation networks in Kitchener-Waterloo. Further, geographically weighted regression modeling and a dummy urban variable representing the urban center/other urban areas were employed to explore the associations across an urban central-peripheral gradient. Associations were analyzed for crimes against persons and crimes against property for four specific crime types (assaults, vehicle theft, sex offences, and drugs. Results suggest that vegetation has a reverse association with crimes against persons and crimes against property while transportation networks have a positive relationship with these two types of crime. Additionally, vegetation can be a deterrent to vehicle theft crime and drugs, while transportation networks can be a facilitator of drug-related crimes. Besides, these two associations appear stronger in the urban center compared to the urban periphery.

  7. Correlations Between the Gradient of Contrast Density, Evaluated by Cardio CT, and Functional Significance of Coronary Artery Stenosis

    Directory of Open Access Journals (Sweden)

    Orzan Marius

    2016-06-01

    Full Text Available Background: Assessment of the hemodynamic significance of a coronary artery stenosis is a challenging task, being extremely important for the establishment of indication for revascularization in atherosclerotic coronary artery stenosis. The aim of this study was to evaluate the role of a new marker reflecting the functional significance of a coronary artery stenosis, represented by the attenuation degree of contrast density along the stenosis by Coronary CT.

  8. Linking Soil Physical Parameters Along a Density Gradient in a Loess-Soil Long-Term Experiment

    DEFF Research Database (Denmark)

    Eden, Marie; Møldrup, Per; Schjønning, Per

    2012-01-01

    It is important to understand the impact of texture and organic carbon (OC) on soil structure development. Only few studies investigated this for silt-dominated soils. In this study, soil physical properties were determined on samples from a controlled experiment (Static Fertilization Experiment...... coefficient data; the model pore-connectivity factor was fairly constant, whereas the water blockage factor was markedly different. Water and air parameters both implied that change in bulk density was the major driver for diffusive and convective parameters in the experiment....

  9. The Effect of Pre-Impact Porosity and Vertical Density Gradients on the Gravity Signature of Lunar Craters

    Science.gov (United States)

    Milbury, Colleen; Johnson, Brandon C.; Melosh, H. Jay; Collins, Gareth S.; Blair, David M.; Soderblom, Jason M.; Nimmo, Francis; Phillips, Roger J.; Bierson, Carver J.; Zuber, Maria T.

    2015-11-01

    overall porosity, but higher vertical gradients, giving craters within SPA more-negative BAs than those within the highlands crust. These simulations demonstrate that the BA and porosities reported here are valid for determining general trends only.

  10. A protocol for exosome isolation and characterization: evaluation of ultracentrifugation, density-gradient separation, and immunoaffinity capture methods.

    Science.gov (United States)

    Greening, David W; Xu, Rong; Ji, Hong; Tauro, Bow J; Simpson, Richard J

    2015-01-01

    Exosomes are 40-150 nm extracellular vesicles that are released from a multitude of cell types, and perform diverse cellular functions including intercellular communication, antigen presentation, and transfer of tumorigenic proteins, mRNA and miRNA. Exosomes are important regulators of the cellular niche, and their altered characteristics in many diseases, such as cancer, suggest their importance for diagnostic and therapeutic applications, and as drug delivery vehicles. Exosomes have been purified from biological fluids and in vitro cell cultures using a variety of strategies and techniques. In this chapter, we reveal the protocol and key insights into the isolation, purification and characterization of exosomes, distinct from shed microvesicles and apoptotic blebs. Using the colorectal cancer cell line LIM1863 as a cell model, a comprehensive evaluation of exosome isolation methods including ultracentrifugation (UC-Exos), OptiPrep™ density-based separation (DG-Exos), and immunoaffinity capture using anti-EpCAM-coated magnetic beads (IAC-Exos) were examined. All exosome isolation methodologies contained 40-150 nm vesicles based on electron microscopy, and positive for exosome markers (Alix, TSG101, HSP70) based on immunoblotting. This protocol employed a proteomic profiling approach to characterize the protein composition of exosomes, and label-free spectral counting to evaluate the effectiveness of each method in exosome isolation. Based on the number of MS/MS spectra identified for exosome markers and proteins associated with their biogenesis, trafficking, and release, IAC-Exos was shown to be the most effective method to isolate exosomes. However, the use of density-based separation (DG-Exos) provides significant advantages for exosome isolation when the use of immunoaffinity capture is limited (due to antibody availability and suitability of exosome markers).

  11. A density functional study of (17)O, (14)N and (2)H electric field gradient tensors in the real crystalline structure of alpha-glycine.

    Science.gov (United States)

    Behzadi, Hadi; Hadipour, Nasser L; Mirzaei, Mahmoud

    2007-01-01

    A density functional theory (DFT) study was carried out to calculate (17)O, (14)N and (2)H electric field gradient (EFG) tensors in accurate neutron diffraction structures of alpha-glycine at 288 and 427 K. B3LYP is the used method and 6-311+G(*) and 6-311++G(**) are the basis sets in the calculations of EFG tensors at the sites of (17)O, (14)N and (2)H nuclei in the monomer and the octameric cluster of alpha-glycine at two temperatures. Quadrupole coupling constants and asymmetry parameters are the converted parameters of calculated EFG tensors to experimentally measurable ones. The calculated results of monomer and the target molecule in octameric cluster reveal that hydrogen-bonding interactions play an important role in the crystalline structure of alpha-glycine where the results of the target molecule in octameric cluster are in good agreement with the experiments.

  12. 3D imaging of flow patterns in an internally-pumped microfluidic device: redox magnetohydrodynamics and electrochemically-generated density gradients.

    Science.gov (United States)

    Gao, Feng; Kreidermacher, Adam; Fritsch, Ingrid; Heyes, Colin D

    2013-05-07

    Redox magnetohydrodynamics (MHD) is a promising technique for developing new electrochemical-based microfluidic flow devices with unique capabilities, such as easily switching flow direction and adjusting flow speeds and flow patterns as well as avoiding bubble formation. However, a detailed description of all the forces involved and predicting flow patterns in confined geometries is lacking. In addition to redox-MHD, density gradients caused by the redox reactions also play important roles. Flow in these devices with small fluid volumes has mainly been characterized by following microbead motion by optical microscopy either by particle tracking velocimetry (PTV) or by processing the microbead images by particle image velocimetry (PIV) software. This approach has limitations in spatial resolution and dimensionality. Here we use fluorescence correlation spectroscopy (FCS) to quantitatively and accurately measure flow speeds and patterns in the ~5-50 μm/s range in redox-MHD-based microfluidic devices, from which 3D flow maps are obtained with a spatial resolution down to 2 μm. The 2 μm spatial resolution flow speeds map revealed detailed flow profiles during redox-MHD in which the velocity increases linearly from above the electrode and reaches a plateau across the center of the cell. By combining FCS and video-microscopy (with PTV and PIV processing approaches), we are able to quantify a vertical flow of ~10 μm/s above the electrodes as a result of density gradients caused by the redox reactions and follow convection flow patterns. Overall, combining FCS, PIV, and PTV analysis of redox-MHD is a powerful combination to more thoroughly characterize the underlying forces in these promising microfluidic devices.

  13. Ecohydrologic controls on vegetation density and evapotranspiration partitioning across the climatic gradients of the central United States

    Directory of Open Access Journals (Sweden)

    J. P. Kochendorfer

    2008-03-01

    Full Text Available The soil-water balance and plant water use are investigated over a domain encompassing the central United States using the Statistical-Dynamical Ecohydrology Model (SDEM. The seasonality in the model and its use of the two-component Shuttleworth-Wallace canopy model allow for application of an ecological optimality hypothesis in which vegetation density, in the form of peak green leaf area index (LAI, is maximized, within upper and lower bounds, such that, in a typical season, soil moisture in the latter half of the growing season just reaches the point at which water stress is experienced. Another key feature of the SDEM is that it partitions evapotranspiration into transpiration, evaporation from canopy interception, and evaporation from the soil surface. That partitioning is significant for the soil-water balance because the dynamics of the three processes are very different. The partitioning and the model-determined peak in green LAI are validated based on observations in the literature, as well as through the calculation of water-use efficiencies with modeled transpiration and large-scale estimates of grassland productivity. Modeled-determined LAI are seen to be at least as accurate as the unaltered satellite-based observations on which they are based. Surprising little dependence on climate and vegetation type is found for the percentage of total evapotranspiration that is soil evaporation, with most of the variation across the study region attributable to soil texture and the resultant differences in vegetation density. While empirical evidence suggests that soil evaporation in the forested regions of the most humid part of the study region is somewhat overestimated, model results are in excellent agreement with observations from croplands and grasslands. The implication of model results for water-limited vegetation is that the higher (lower soil moisture content in wetter (drier climates is more-or-less completely offset by the greater

  14. Simulating One-Photon Absorption and Resonance Raman Scattering Spectra Using Analytical Excited State Energy Gradients within Time-Dependent Density Functional Theory

    Energy Technology Data Exchange (ETDEWEB)

    Silverstein, Daniel W.; Govind, Niranjan; van Dam, Hubertus J. J.; Jensen, Lasse

    2013-12-10

    A parallel implementation of analytical time-dependent density functional theory gradients is presented for the quantum chemistry program NWChem. The implementation is based on the Lagrangian approach developed by Furche and Ahlrichs. To validate our implementation, we first calculate the Stokes shifts for a range of organic dye molecules using a diverse set of exchange-correlation functionals (traditional density functionals, global hybrids, and range-separated hybrids) followed by simulations of the one-photon absorption and resonance Raman scattering spectrum of the phenoxyl radical, the well-studied dye molecule rhodamine 6G, and a molecular host–guest complex (TTFcCBPQT4+). The study of organic dye molecules illustrates that B3LYP and CAM-B3LYP generally give the best agreement with experimentally determined Stokes shifts unless the excited state is a charge transfer state. Absorption, resonance Raman, and fluorescence simulations for the phenoxyl radical indicate that explicit solvation may be required for accurate characterization. For the host–guest complex and rhodamine 6G, it is demonstrated that absorption spectra can be simulated in good agreement with experimental data for most exchange-correlation functionals. Finally, however, because one-photon absorption spectra generally lack well-resolved vibrational features, resonance Raman simulations are necessary to evaluate the accuracy of the exchange-correlation functional for describing a potential energy surface.

  15. Nonlinear electronic excitations in crystalline solids using meta-generalized gradient approximation and hybrid functional in time-dependent density functional theory

    Science.gov (United States)

    Sato, Shunsuke A.; Taniguchi, Yasutaka; Shinohara, Yasushi; Yabana, Kazuhiro

    2015-12-01

    We develop methods to calculate electron dynamics in crystalline solids in real-time time-dependent density functional theory employing exchange-correlation potentials which reproduce band gap energies of dielectrics; a meta-generalized gradient approximation was proposed by Tran and Blaha [Phys. Rev. Lett. 102, 226401 (2009)] (TBm-BJ) and a hybrid functional was proposed by Heyd, Scuseria, and Ernzerhof [J. Chem. Phys. 118, 8207 (2003)] (HSE). In time evolution calculations employing the TB-mBJ potential, we have found it necessary to adopt the predictor-corrector step for a stable time evolution. We have developed a method to evaluate electronic excitation energy without referring to the energy functional which is unknown for the TB-mBJ potential. For the HSE functional, we have developed a method for the operation of the Fock-like term in Fourier space to facilitate efficient use of massive parallel computers equipped with graphic processing units. We compare electronic excitations in silicon and germanium induced by femtosecond laser pulses using the TB-mBJ, HSE, and a simple local density approximation (LDA). At low laser intensities, electronic excitations are found to be sensitive to the band gap energy: they are close to each other using TB-mBJ and HSE and are much smaller in LDA. At high laser intensities close to the damage threshold, electronic excitation energies do not differ much among the three cases.

  16. Nonlinear electronic excitations in crystalline solids using meta-generalized gradient approximation and hybrid functional in time-dependent density functional theory

    Energy Technology Data Exchange (ETDEWEB)

    Sato, Shunsuke A. [Graduate School of Pure and Applied Sciences, University of Tsukuba, Tsukuba 305-8571 (Japan); Taniguchi, Yasutaka [Center for Computational Science, University of Tsukuba, Tsukuba 305-8571 (Japan); Department of Medical and General Sciences, Nihon Institute of Medical Science, 1276 Shimogawara, Moroyama-Machi, Iruma-Gun, Saitama 350-0435 (Japan); Shinohara, Yasushi [Max Planck Institute of Microstructure Physics, 06120 Halle (Germany); Yabana, Kazuhiro [Graduate School of Pure and Applied Sciences, University of Tsukuba, Tsukuba 305-8571 (Japan); Center for Computational Science, University of Tsukuba, Tsukuba 305-8571 (Japan)

    2015-12-14

    We develop methods to calculate electron dynamics in crystalline solids in real-time time-dependent density functional theory employing exchange-correlation potentials which reproduce band gap energies of dielectrics; a meta-generalized gradient approximation was proposed by Tran and Blaha [Phys. Rev. Lett. 102, 226401 (2009)] (TBm-BJ) and a hybrid functional was proposed by Heyd, Scuseria, and Ernzerhof [J. Chem. Phys. 118, 8207 (2003)] (HSE). In time evolution calculations employing the TB-mBJ potential, we have found it necessary to adopt the predictor-corrector step for a stable time evolution. We have developed a method to evaluate electronic excitation energy without referring to the energy functional which is unknown for the TB-mBJ potential. For the HSE functional, we have developed a method for the operation of the Fock-like term in Fourier space to facilitate efficient use of massive parallel computers equipped with graphic processing units. We compare electronic excitations in silicon and germanium induced by femtosecond laser pulses using the TB-mBJ, HSE, and a simple local density approximation (LDA). At low laser intensities, electronic excitations are found to be sensitive to the band gap energy: they are close to each other using TB-mBJ and HSE and are much smaller in LDA. At high laser intensities close to the damage threshold, electronic excitation energies do not differ much among the three cases.

  17. Free discontinuity problems

    CERN Document Server

    Pratelli, Aldo

    2016-01-01

    This book presents a series of lectures on three of the best known examples of free discontinuity problems: the Mumford-Shah model for image segmentation, a variational model for the epitaxial growth of thin films, and the sharp interface limit of the Ohta-Kawasaki model for pattern formation in dyblock copolymers.

  18. Generalized shock conditions and the contact discontinuity in the Hall-magnetohydrodynamics model

    Energy Technology Data Exchange (ETDEWEB)

    Hameiri, Eliezer [Courant Institute of Mathematical Sciences, New York University, New York 10012 (United States)

    2013-02-15

    It is shown that shocks and contact discontinuities in the Hall-magnetohydrodynamics (HMHD) model must satisfy solvability conditions that replace some of the familiar Rankine-Hugoniot jump conditions when the latter do not apply due to singular behavior of fluxes of conserved quantities. Some of these conditions depend on the larger topology of the plasma and magnetic field and are not merely 'local.' The contact discontinuity which separates two adjoining plasma regions or plasma and vacuum regions is the simplest case where the new jump conditions are applicable and is discussed for a toroidal plasma with sheared magnetic field such as the tokamak, but with no initial mass flow. It is proven that a static discontinuous tokamak-like equilibrium is linearly stable in the HMHD model if it is linearly stable within the ideal magnetohydrodynamics model, provided that the electron pressure depends only on the density, and some other restrictions on the ratio of pressure to density gradients also apply. When the electron pressure does depend on two thermodynamic variables, a sufficient condition for Hall-MHD plasma stability is derived as well.

  19. The Effect of Pre-Impact Porosity and Vertical Density Gradients on the Gravity Signature of Lunar Craters as Seen by GRAIL

    Science.gov (United States)

    Milbury, C.; Johnson, B. C.; Melosh, H., IV; Collins, G. S.; Blair, D. M.; Soderblom, J. M.; Nimmo, F.; Bierson, C. J.; Phillips, R. J.; Zuber, M. T.

    2015-12-01

    As a result of NASA's dual spacecraft Gravity Recovery And Interior Laboratory (GRAIL) mission [Zuber et al., 2013; doi:10.1126/science.1231507], we now know that the lunar crust is highly porous and that the porosity varies laterally [Wieczorek et al., 2013; doi:10.1126/science.1231530] and vertically [Besserer et al., 2014; doi:10.1002/2014GL060240]. Analysis of complex craters located within the lunar highlands reveals that: 1) craters larger than diameter D~210 have positive Bouguer Anomalies (BAs), 2) craters with D ≲ 100 km have both positive and negative BAs that vary about the (near 0) mean by approximately ± 25 mGal, and, 3) D and BA are anticorrelated for craters with D ≲ 100 km [Soderblom et al., 2015; submitted]. Numerical modeling by Milbury et al. [2015, LPSC] shows that pre-impact porosity is the dominant influence on the gravity signature of complex craters with D ≲ 100 km, and mantle uplift dominates the gravity for those with D > 140 km. Phillips et al. [2015, LPSC] showed that complex craters located in the South Pole-Aitken (SPA) basin tend to have more-negative BAs than similar craters in the highlands. By including (pre-impact) vertical porosity/density gradients in our impact simulations, we reproduce the observed anticorrelation between BA and D for D ≲ 100 km, and the observed difference between the BAs of SPA and highland craters. We use the iSALE hydrocode including pore space compaction [Wünnemann et al., 2006; doi:10.1016/j.icarus.2005.10.013] and dilatant bulking [Collins, 2014; doi:10.1002/2014JE004708] to understand how the gravity signature of impact craters develop. In this study we vary density/porosity with depth. We find that simulations that have constant porosity with depth have a lower BA for a given crater diameter than those with varying porosity. We used two different mean porosities (7% and 14%) and found that the BA increases with increasing porosity, similar to simulations with constant porosity. Larger

  20. Calorific value of Prosopis africana and Balanites aegyptiaca wood: Relationships with tree growth, wood density and rainfall gradients in the West African Sahel

    Energy Technology Data Exchange (ETDEWEB)

    Montes, Carmen Sotelo; Weber, John C. [World Agroforestry Centre (ICRAF), Sahel Office, B.P. E 5118 Bamako (Mali); Silva, Dimas Agostinho da; Bolzon de Muniz, Graciela Ines [Universidade Federal do Parana (UFPR), Av. Lothario Meissner, 900, CEP.: 80270-170-Curitiba (Brazil); Garcia, Rosilei A. [Universidade Federal Rural do Rio de Janeiro (UFRRJ), Instituto de Florestas, Departamento de Produtos Florestais, BR 465, km 07, 23890-000, Seropedica, Rio de Janeiro (Brazil)

    2011-01-15

    Prosopis africana and Balanites aegyptiaca are native tree species in the West African Sahel and provide wood for fuel, construction and other essential products. A provenance/progeny test of each species was established at one relatively dry site in Niger, and evaluated at 13 years. Gross calorific value of the wood was determined for a random sample of trees in each test: gross CV and CVm{sup 3} = gross calorific value in MJ kg{sup -1} and MJ m{sup -3}, respectively. The major objectives were to determine if gross CV was positively correlated with wood density and tree growth, and if gross CV and/or CVm{sup 3} varied with rainfall gradients in the sample region. Provenances were grouped into a drier and more humid zone, and correlations were computed among all trees and separately in each zone. Results indicated that gross CV was not significantly correlated with density in either species. Gross CV was positively correlated with growth of P. africana (but not B. aegyptiaca) only in the drier zone. Gross CVm{sup 3} was positively correlated with growth of both species, and the correlations were stronger in the drier zone. Multiple regressions with provenance latitude, longitude and elevation indicated that provenance means for gross CV increased, in general, from the drier to the more humid zones. Regressions with gross CVm{sup 3} were not significant. Results are compared with earlier research reports from the provenance/progeny tests and with other tropical hardwood species; and practical implications are presented for tree improvement and conservation programs in the region. (author)

  1. Sperm selection by Capripure(®) density-gradient centrifugation versus the dextran swim-up procedure in wild mountain ruminants.

    Science.gov (United States)

    Santiago-Moreno, J; Esteso, M C; Castaño, C; Toledano-Díaz, A; Rodríguez, E; López-Sebastián, A

    2014-10-01

    This study compares the effectiveness of two methods of sperm selection - Capripure(®) density-gradient centrifugation (DGC) and dextran swim-up (DSU) - in semen samples from Iberian ibex (Capra pyrenaica) and European mouflon (Ovis musimon). During the increasing photoperiod, Capripure(®) DGC improved the percentage of sperm with progressive motility (Pmouflon, Capripure(®) DGC selection was unaffected by photoperiod, had no influence on any sperm variable, and selected 47.8% of the initial total number of mouflon spermatozoa in ejaculate samples. Photoperiod had no influence on the effectiveness of DSU in either ibexes or mouflons. In the ibexes, DSU reduced (Pmouflons, DSU had no significant influence on any sperm variable, and selected 27.8% of the initial total number. Capripure(®) DGC improved ibex and mouflon sperm motility (Pmouflon, sperm cells showing non-progressive motility were found after only 20 h of post-centrifugation incubation following Capripure(®) DGC selection. In conclusion, Capripure(®) DGC would seem a useful method for selecting the best spermatozoa from both ibex and mouflon ejaculates.

  2. [Development of a gentamicin producer under different culture conditions studied by a method of differential centrifugation of the mycelium in a saccharose density gradient].

    Science.gov (United States)

    Losev, V V; Laznikova, T N; Dmitrieva, S V

    1981-05-01

    The method of differential centrifugation in the sucrose density gradient (SDG) enabled one to trace the changes in the development of the seed and fermentation mycelium of the gentamicin-producing organism. Correlation between gentamicin distribution in the SDG and the culture productivity was found. It was shown that the culture grown under the optimal aeration and agitation conditions was characterized by formation of higher amounts of the mycelium in the 5th and 6th layers of the SDG. Such mycelium was more productive than that from the other SDG layers. The most productive 48-hour seed culture had the more significant part of the mycelium in the 3rd layer of the SDG. When such a culture had the more significant part of the mycelium in the 3rd layer of the SDG. When such a culture was used as the seed material, the activity of the fermentation broth was the highest. The method of differential centrifugation in the SDG provides determination of the culture productivity by the volumes of the fermentation mycelium in the 5th and 6th layers or the seed mycelium in the 3rd layer of the SDG.

  3. Instability of spiral and scroll waves in the presence of a gradient in the fibroblast density: the effects of fibroblast-myocyte coupling

    CERN Document Server

    Zimik, Soling

    2016-01-01

    Fibroblast-myocyte coupling can modulate electrical-wave dynamics in cardiac tissue. In diseased hearts, the distribution of fibroblasts is heterogeneous, so there can be gradients in the fibroblast density (henceforth we call this GFD) especially from highly injured regions, like infarcted or ischemic zones, to less-wounded regions of the tissue. Fibrotic hearts are known to be prone to arrhythmias, so it is important to understand the effects of GFD in the formation and sustenance of arrhythmic re- entrant waves, like spiral or scroll waves. Therefore, we investigate the effects of GFD on the stability of spiral and scroll waves of electrical activation in a state-of-the- art mathematical model for cardiac tissue in which we also include fibroblasts. By introducing GFD in controlled ways, we show that spiral and scroll waves can be unstable in the presence of GFDs because of regions with varying spiral or scroll-wave frequency {\\omega}, induced by the GFD. We examine the effects of the resting membrane pote...

  4. Clinical efficacy of a combination of Percoll continuous density gradient and swim-up techniques for semen processing in HIV-1 serodiscordant couples

    Directory of Open Access Journals (Sweden)

    Osamu Inoue

    2017-01-01

    Full Text Available To evaluate the clinical efficacy of a procedure comprising a combination of Percoll continuous density gradient and modified swim-up techniques for the removal of human immunodeficiency virus type 1 (HIV-1 from the semen of HIV-1 infected males, a total of 129 couples with an HIV-1 positive male partner and an HIV-1 negative female partner (serodiscordant couples who were treated at Keio University Hospital between January 2002 and April 2012 were examined. A total of 183 ejaculates from 129 HIV-1 infected males were processed. After swim-up, we successfully collected motile sperms at a recovery rate as high as 100.0% in cases of normozoospermia (126/126 ejaculates, oligozoospermia (6/6, and asthenozoospermia (36/36. The recovery rate of oligoasthenozoospermia was 86.7% (13/15. In processed semen only four ejaculates (4/181:2.2% showed viral nucleotide sequences consistent with those in the blood of the infected males. After using these sperms, no horizontal infections of the female patients and no vertical infections of the newborns were observed. Furthermore, no obvious adverse effects were observed in the offspring. This protocol allowed us to collect HIV-1 negative motile sperms at a high rate, even in male factor cases. We concluded that our protocol is clinically effective both for decreasing HIV-1 infections and for yielding a healthy child.

  5. Clinical efficacy of a combination of Percoll continuous density gradient and swim-up techniques for semen processing in HIV-1 serodiscordant couples

    Science.gov (United States)

    Inoue, Osamu; Kuji, Naoaki; Ito, Hiroe; Yamada, Mitsutoshi; Hamatani, Toshio; Oyadomari, Aimi; Kato, Shingo; Hanabusa, Hideji; Isaka, Keiichi; Tanaka, Mamoru

    2017-01-01

    To evaluate the clinical efficacy of a procedure comprising a combination of Percoll continuous density gradient and modified swim-up techniques for the removal of human immunodeficiency virus type 1 (HIV-1) from the semen of HIV-1 infected males, a total of 129 couples with an HIV-1 positive male partner and an HIV-1 negative female partner (serodiscordant couples) who were treated at Keio University Hospital between January 2002 and April 2012 were examined. A total of 183 ejaculates from 129 HIV-1 infected males were processed. After swim-up, we successfully collected motile sperms at a recovery rate as high as 100.0% in cases of normozoospermia (126/126 ejaculates), oligozoospermia (6/6), and asthenozoospermia (36/36). The recovery rate of oligoasthenozoospermia was 86.7% (13/15). In processed semen only four ejaculates (4/181:2.2%) showed viral nucleotide sequences consistent with those in the blood of the infected males. After using these sperms, no horizontal infections of the female patients and no vertical infections of the newborns were observed. Furthermore, no obvious adverse effects were observed in the offspring. This protocol allowed us to collect HIV-1 negative motile sperms at a high rate, even in male factor cases. We concluded that our protocol is clinically effective both for decreasing HIV-1 infections and for yielding a healthy child. PMID:26908065

  6. Density gradient theory combined with the PC-SAFT equation of state used for modeling the surface tension of associating systems

    Directory of Open Access Journals (Sweden)

    Vinš Václav

    2014-03-01

    Full Text Available The density gradient theory (GT combined with a SAFT-type (Statistical Associating Fluid Theory equation of state has been used for modeling the surface tension of associating fluids represented by a series of six alkanols ranging from methanol to 1-pentanol. The effect of nonzero dipole moment of the selected alkanols on the predicted surface tension was investigated in this study. Results of the GT + non-polar Perturbed Chain (PC SAFT equation of state were compared to predictions of GT combined with the PC-polar-SAFT, i.e. PCP-SAFT, equation. Both GT + PC-SAFT and GT + PCP-SAFT give reasonable prediction of the surface tension for pure alkanols. Results of both models are comparable as no significant difference in the modeled saturation properties and in the predicted surface tension using GT was found. Consideration of dipolar molecules of selected alkanols using PCP-SAFT had only minor effect on the predicted properties compared to the non-polar PC-SAFT model.

  7. IS DISCONTINUOUS BERGSONISM POSSIBLE?

    Directory of Open Access Journals (Sweden)

    TERESA CASTELÃO-LAWLESS

    2010-11-01

    Full Text Available Gaston Bachelard’s position toward the philosophy of Henri Bergson is most interesting. In La Dialectique de la durée (1936, Bachelard claims that “of Bergsonism we accept everything but continuity” and that the rest of his book will be an attempt to show the possibility of a “discontinuous Bergsonism”. In this paper, I focus on the reaction of Bachelard to works of Bergson such as the Essai sur les données immédiates de la conscience (1889, L’Evolution créatrice (1907, and Durée et simultanéité: à propos de la théorie d’Einstein (1922 and demonstrate that even though the conditions necessary for the possibility of a discontinuous Bergsonism are not the same ones which Bachelard had in mind when he accepted most of Bergsonism, their phenomenologies of the scientific spirit were analogous.

  8. System dynamics with interaction discontinuity

    CERN Document Server

    Luo, Albert C J

    2015-01-01

    This book describes system dynamics with discontinuity caused by system interactions and presents the theory of flow singularity and switchability at the boundary in discontinuous dynamical systems. Based on such a theory, the authors address dynamics and motion mechanism of engineering discontinuous systems due to interaction. Stability and bifurcations of fixed points in nonlinear discrete dynamical systems are presented, and mapping dynamics are developed for analytical predictions of periodic motions in engineering discontinuous dynamical systems. Ultimately, the book provides an alternative way to discuss the periodic and chaotic behaviors in discontinuous dynamical systems.

  9. Surface Tension of Binary Mixtures Including Polar Components Modeled by the Density Gradient Theory Combined with the PC-SAFT Equation of State

    Science.gov (United States)

    Vinš, Václav; Planková, Barbora; Hrubý, Jan

    2013-05-01

    In this study, the Cahn-Hilliard density gradient theory (GT) is used for predicting the surface tension of various binary mixtures at relatively wide temperature ranges and for testing the application of the GT for predictions of homogeneous nucleation. The GT was combined with two physically based equations of state (EoS), namely the perturbed-chain (PC) statistical associating fluid theory (SAFT) and its modification for polar substances the perturbed-chain polar (PCP) SAFT. The GT applied to the planar phase interface was employed to predict the interfacial tension for various quadrupolar (CO2 and benzene) and dipolar (difluoromethane, i.e., R32; pentafluoroethane, i.e., R125; and 1,1,1,2-tetrafluoroethane, i.e., R134a) substances and for five binary mixtures including polar components ( n-decane + CO2, benzene + CO2, R32 + R125, R32 + R134a, R134a + R125). The PCP-SAFT EoS combined with the GT provides more accurate results for both the quadrupolar and dipolar substances than the original PC-SAFT EoS. Besides the planar phase interface, the GT was also applied to the spherical phase interface simulating a critical cluster occurring in homogeneous nucleation of droplets. Carbon dioxide was considered, because it has a relatively high quadrupole moment and because of its relevance to natural gas processing. Application of the PCP-SAFT EoS provides a significant improvement compared to the PC-SAFT EoS, and it is clearly superior to the classical cubic Peng-Robinson EoS, which is still used for modeling droplet nucleation.

  10. Comparison of the effect of different media on the clinical outcomes of the density-gradient centrifugation/swim-up and swim-up methods.

    Science.gov (United States)

    Kim, Eun-Kyung; Kim, Eun-Ha; Kim, Eun-Ah; Lee, Kyung-Ah; Shin, Ji-Eun; Kwon, Hwang

    2015-03-01

    Sperm must be properly prepared in in vitro fertilization (IVF)-embryo transfer (ET) programs in order to control the fertilization rate and ensure that embryos are of high quality and have appropriate developmental abilities. The objective of this study was to determine the most optimal sperm preparation method for IVF. Patients less than 40 years of age who participated in a fresh IVF-ET cycle from November 2012 to March 2013 were included in this study. Poor responders with less than three mature oocytes were excluded. Ham's F-10 medium or sperm-washing medium (SWM) was used in combination with the density-gradient centrifugation/swim-up (DGC-SUP) or SUP methods for sperm preparation. A total of 429 fresh IVF-ET cycles were grouped according to the media and methods used for sperm preparation and retrospectively analyzed (DGC-SUP/Ham's F-10, n=82; DGC-SUP/SWM, n=43; SUP/Ham's F-10, n=181; SUP/SWM, n=123). There were no significant differences among these four groups with respect to the mean age of the female partners, duration of infertility, number of previous IVF cycles, and retrieved oocytes. We determined that both the DGC-SUP and SUP methods for sperm preparation from whole semen, using either Ham's F-10 or SWM media, result in comparable clinical outcomes, including fertilization and pregnancy rates. We suggest that both media and both methods for sperm preparation can be used for selecting high-quality sperm for assistive reproductive technology programs.

  11. Efficient isolation of sperm with high DNA integrity and stable chromatin packaging by a combination of density-gradient centrifugation and magnetic-activated cell sorting.

    Science.gov (United States)

    Chi, Hee-Jun; Kwak, Su-Jin; Kim, Seok-Gi; Kim, Youn-Young; Park, Ji-Young; Yoo, Chang-Seok; Park, Il-Hae; Sun, Hong-Gil; Kim, Jae-Won; Lee, Kyeong-Ho

    2016-12-01

    This study was carried out to investigate the correlations of the sperm DNA fragmentation index (DFI) with semen parameters and apoptosis, and to investigate the effects of density-gradient centrifugation (DGC) and magnetic-activated cell sorting (MACS) on reducing the proportion of sperm with DNA fragmentation and protamine deficiency. Semen analysis and a sperm DNA fragmentation assay were performed to assess the correlations between semen parameters and the DFI in 458 semen samples. Sperm with progressive motility or non-apoptosis were isolated by DGC or MACS, respectively, in 29 normozoospermic semen samples. The effects of DGC or MACS alone and of DGC and MACS combined on reducing the amount of sperm in the sample with DNA fragmentation and protamine deficiency were investigated. The sperm DFI showed a significant correlation (r=-0.347, p<0.001) with sperm motility and morphology (r=-0.114, p<0.05) but not with other semen parameters. The DFI (11.5%±2.0%) of semen samples was significantly reduced by DGC (8.1%±4.1%) or MACS alone (7.4%±3.9%) (p<0.05). The DFI was significantly further reduced by a combination of DGC and MACS (4.1%±1.3%, p<0.05). Moreover, the combination of DGC and MACS (1.6%±1.1%, p<0.05) significantly reduced the protamine deficiency rate of semen samples compared to DGC (4.4%±3.2%) or MACS alone (3.4%±2.2%). The combination of DGC and MACS may be an effective method to isolate high-quality sperm with progressive motility, non-apoptosis, high DNA integrity, and low protamine deficiency in clinical use.

  12. QUASILINEAR ELLIPTIC BOUNDARY VALUE PROBLEMS WITH DISCONTINUOUS NONLINEARITIES

    Institute of Scientific and Technical Information of China (English)

    2000-01-01

    In this paper we shall consider a discontinuous nonlinear nonmonotone elliptic boundary value problem, i.e. a quasilinear elliptic hemivariational inequality. This kind of problems is strongly motivated by various problems in mechanics. By use of the notion of the generalized gradient of Clarke and the theory of pseudomonotone operators, we will prove the existence of solutions.

  13. Excursions in fluvial (dis)continuity

    Science.gov (United States)

    Grant, Gordon E.; O'Connor, James E.; Safran, Elizabeth

    2017-01-01

    Lurking below the twin concepts of connectivity and disconnectivity are their first, and in some ways, richer cousins: continuity and discontinuity. In this paper we explore how continuity and discontinuity represent fundamental and complementary perspectives in fluvial geomorphology, and how these perspectives inform and underlie our conceptions of connectivity in landscapes and rivers. We examine the historical roots of continuum and discontinuum thinking, and how much of our understanding of geomorphology rests on contrasting views of continuity and discontinuity. By continuum thinking we refer to a conception of geomorphic processes as well as geomorphic features that are expressed along continuous gradients without abrupt changes, transitions, or thresholds. Balance of forces, graded streams, and hydraulic geometry are all examples of this perspective. The continuum view has played a prominent role in diverse disciplinary fields, including ecology, paleontology, and evolutionary biology, in large part because it allows us to treat complex phenomena as orderly progressions and invoke or assume equilibrium processes that introduce order and prediction into our sciences.In contrast the discontinuous view is a distinct though complementary conceptual framework that incorporates non-uniform, non-progressive, and non-equilibrium thinking into understanding geomorphic processes and landscapes. We distinguish and discuss examples of three different ways in which discontinuous thinking can be expressed: 1) discontinuous spatial arrangements or singular events; 2) specific process domains generally associated with thresholds, either intrinsic or extrinsic; and 3) physical dynamics or changes in state, again often threshold-linked. In moving beyond the continuous perspective, a fertile set of ideas comes into focus: thresholds, non-equilibrium states, heterogeneity, catastrophe. The range of phenomena that is thereby opened up to scientific exploration similarly expands

  14. MHD discontinuities in solar flares: continuous transitions and plasma heating

    CERN Document Server

    Ledentsov, L S

    2015-01-01

    The boundary conditions for the ideal MHD equations on a plane dis- continuity surface are investigated. It is shown that, for a given mass flux through a discontinuity, its type depends only on the relation between inclina- tion angles of a magnetic field. Moreover, the conservation laws on a surface of discontinuity allow changing a discontinuity type with gradual (continu- ous) changes in the conditions of plasma flow. Then there are the so-called transition solutions that satisfy simultaneously two types of discontinuities. We obtain all transition solutions on the basis of the complete system of boundary conditions for the MHD equations. We also found the expression describing a jump of internal energy of the plasma flowing through the dis- continuity. Firstly, this allows constructing a generalized scheme of possible continuous transitions between MHD discontinuities. Secondly, it enables the examination of the dependence of plasma heating by plasma density and configuration of the magnetic field near t...

  15. Cultivo de células mesenquimais do sangue de cordão umbilical com e sem uso do gradiente de densidade Ficoll-Paque Blood mesenchymal stem cell culture from the umbilical cord with and without Ficoll-Paque density gradient method

    Directory of Open Access Journals (Sweden)

    Rosa Sayoko Kawasaki-Oyama

    2008-03-01

    Ficoll-Paque gradient density method (d=1.077g/ml. METHODS: Ten samples of the umbilical cord blood obtained from full-term deliveries were submitted to two different procedures of mesenchymal stem cell culture: a Method without the Ficoll-Paque density gradient, which concentrates all nucleated cells; b Method with the Ficoll-Paque density gradient, which selects only low-density mononuclear cells. Cells were initially plated into 25 cm² cultures flasks at a density of 1x10(7 nucleated cells/cm² and 1x10(6 mononuclear cells/cm². RESULTS: It was obtained 2-13x10(7 (median = 2.35x10(7 nucleated cells/cm² by the method without the Ficoll-Paque gradient density, and 3.7-15.7x10(6 (median = 7.2x10(6 mononuclear cells/cm² by the method with the Ficoll-Paque gradient density. In all cultures adherent cells were observed 24 hours after being cultured. Cells presented fibroblastoid and epithelioid morphology. In most of the cultures, cell proliferation occurred in the first week, but after the second week only some cultures - derived from the method without the Ficoll-Paque gradient density - maintained the growth rate reaching confluence. Those cultures were submitted to trypsinization with 0.25% trypsin/EDTA solution and cultured for two to three months. CONCLUSION: In the samples analyzed, cell separation and mesenchymal stem cell culture techniques from human umbilical cord blood by the method without the Ficoll-Paque density gradient was more efficient than the method with the Ficoll-Paque density gradient.

  16. Variation of DNA Fragmentation Levels During Density Gradient Sperm Selection for Assisted Reproduction Techniques: A Possible New Male Predictive Parameter of Pregnancy?

    Science.gov (United States)

    Muratori, Monica; Tarozzi, Nicoletta; Cambi, Marta; Boni, Luca; Iorio, Anna Lisa; Passaro, Claudia; Luppino, Benedetta; Nadalini, Marco; Marchiani, Sara; Tamburrino, Lara; Forti, Gianni; Maggi, Mario; Baldi, Elisabetta; Borini, Andrea

    2016-05-01

    Predicting the outcome of in vitro fertilization (IVF)/intracytoplasmic sperm injection (ICSI) is one main goal of the present research on assisted reproduction. To understand whether density gradient centrifugation (DGC), used to select sperm, can affect sperm DNA integrity and impact pregnancy rate (PR), we prospectively evaluated sperm DNA fragmentation (sDF) by TUNEL/PI, before and after DGC. sDF was studied in a cohort of 90 infertile couples the same day of IVF/ICSI treatment. After DGC, sDF increased in 41 samples (Group A, median sDF value: 29.25% [interquartile range, IQR: 16.01-41.63] in pre- and 60.40% [IQR: 32.92-93.53] in post-DGC) and decreased in 49 (Group B, median sDF value: 18.84% [IQR: 13.70-35.47] in pre- and 8.98% [IQR: 6.24-15.58] in post-DGC). PR was 17.1% and 34.4% in Group A and B, respectively (odds ratio [OR]: 2.58, 95% confidence interval [CI]: 0.95-7.04, P = 0.056). After adjustment for female factor, female and male age and female BMI, the estimated OR increased to 3.12 (95% CI: 1.05-9.27, P = 0.041). According to the subgroup analysis for presence/absence of female factor, heterogeneity in the association between the Group A and B and PR emerged (OR: 4.22, 95% CI: 1.16-15.30 and OR: 1.53, 95% CI: 0.23-10.40, respectively, for couples without, n = 59, and with, n = 31, female factor).This study provides the first evidence that the DGC procedure produces an increase in sDF in about half of the subjects undergoing IVF/ICSI, who then show a much lower probability of pregnancy, raising concerns about the safety of this selection procedure. Evaluation of sDF before and after DGC configures as a possible new prognostic parameter of pregnancy outcome in IVF/ICSI. Alternative sperm selection strategies are recommended for those subjects who undergo the damage after DGC.

  17. Gradient-only approaches to avoid spurious local minima in unconstrained optimization

    CSIR Research Space (South Africa)

    Wilke, DN

    2013-06-01

    Full Text Available local minima, are artifacts of the numerical strategies used and should not influence the solution to the optimization problem. Although the discontinuities imply that the gradient field is not defined everywhere, the gradient field associated...

  18. Orbital localization, charge transfer, and band gaps in semilocal density-functional theory.

    Science.gov (United States)

    Armiento, R; Kümmel, S

    2013-07-19

    We derive an exchange energy functional of generalized gradient form with a corresponding potential that changes discontinuously at integer particle numbers. The functional is semilocal, yet incorporates key features that are connected to the derivative discontinuity of Kohn-Sham density-functional theory. We validate our construction for several paradigm systems and explain how it addresses central well-known deficiencies of antecedent semilocal methods, i.e., the description of charge transfer, properly localized orbitals, and band gaps. We find, e.g., an improved shell structure for atoms, eigenvalues that more closely correspond to ionization energies, and an improved description of band structure where localized states are lowered in energy.

  19. Testing discontinuities in nonparametric regression

    KAUST Repository

    Dai, Wenlin

    2017-01-19

    In nonparametric regression, it is often needed to detect whether there are jump discontinuities in the mean function. In this paper, we revisit the difference-based method in [13 H.-G. Müller and U. Stadtmüller, Discontinuous versus smooth regression, Ann. Stat. 27 (1999), pp. 299–337. doi: 10.1214/aos/1018031100

  20. A Simple Stochastic Differential Equation with Discontinuous Drift

    DEFF Research Database (Denmark)

    Simonsen, Maria; Leth, John-Josef; Schiøler, Henrik

    2013-01-01

    In this paper we study solutions to stochastic differential equations (SDEs) with discontinuous drift. We apply two approaches: The Euler-Maruyama method and the Fokker-Planck equation and show that a candidate density function based on the Euler-Maruyama method approximates a candidate density f...

  1. Extended displacement discontinuity method for analysis of cracks in 2D thermal piezoelectric semiconductors

    Science.gov (United States)

    Zhao, MingHao; Pan, YiBo; Fan, CuiYing; Xu, GuangTao

    2017-08-01

    The extended displacement discontinuities method has previously been used for crack analysis of elastic materials, piezoelectric media, magneto-electro-elastic media and piezoelectric semiconductors. Here, this method is extended to study cracks in two-dimensional n-type thermal piezoelectric semiconductors. The extended displacement discontinuities include the conventional displacement discontinuity, electric potential discontinuity, carrier density discontinuity, as well as temperature discontinuity across crack faces; correspondingly, the extended stresses represent conventional stress, electric displacement, electric current, and heat flux. Employing a Fourier transform, the fundamental solutions for a line crack under uniformly distributed extended displacement discontinuities on the crack faces are derived under mechanical, electrical, and heat loading. Based on the obtained fundamental solutions, an extended displacement discontinuity boundary element method is developed. The stress and heat flux intensity factors at the crack tip are calculated under different combined loadings.

  2. Rapid separation of Arabidopsis male gametophyte developmental stages using a Percoll gradient.

    Science.gov (United States)

    Dupl'áková, Nikoleta; Dobrev, Petre I; Reňák, David; Honys, David

    2016-10-01

    Research investigating the dynamics of male gametophyte (MG) development has proven to be challenging for the plant science community. Here we describe our protocol for separating Arabidopsis MG developmental stages, which is based on the centrifugation of pollen through a discontinuous Percoll concentration gradient. This Percoll gradient can be formed using a pipette, and it does not require a gradient maker. The purity of the isolated developing spores is as high as 70%, and in most separations it is well above 80%. Using this protocol, we can separate four different stages of pollen development-uninucleate microspore (UNM), bicellular pollen (BCP), tricellular immature pollen (TCP) and mature pollen grain (MPG). The duration of the separation procedure, excluding the cutting of flower inflorescences, is 6 h. This is reduced to 4 h when using a vacuum cleaning method to remove the MPGs before the Percoll density separation.

  3. Gradient networks

    Science.gov (United States)

    Toroczkai, Zoltán; Kozma, Balázs; Bassler, Kevin E.; Hengartner, N. W.; Korniss, G.

    2008-04-01

    Gradient networks are defined (Toroczkai and Bassler 2004 Nature 428 716) as directed graphs formed by local gradients of a scalar field distributed on the nodes of a substrate network G. We present the derivation for some of the general properties of gradient graphs and give an exact expression for the in-degree distribution R(l) of the gradient network when the substrate is a binomial (Erd{\\;\\kern -0.10em \\raise -0.35ex \\{{^{^{\\prime\\prime}}}}\\kern -0.57em \\o} s-Rényi) random graph, G_{N,p} , and the scalars are independent identically distributed (i.i.d.) random variables. We show that in the limit N \\to \\infty, p \\to 0, z = pN = \\mbox{const} \\gg 1, R(l)\\propto l^{-1} for l Bassler (2004 Nature 428 716).

  4. Magnetic discontinuities in magnetohydrodynamic turbulence and in the solar wind.

    Science.gov (United States)

    Zhdankin, Vladimir; Boldyrev, Stanislav; Mason, Joanne; Perez, Jean Carlos

    2012-04-27

    Recent measurements of solar wind turbulence report the presence of intermittent, exponentially distributed angular discontinuities in the magnetic field. In this Letter, we study whether such discontinuities can be produced by magnetohydrodynamic (MHD) turbulence. We detect the discontinuities by measuring the fluctuations of the magnetic field direction, Δθ, across fixed spatial increments Δx in direct numerical simulations of MHD turbulence with an imposed uniform guide field B(0). A large region of the probability density function (pdf) for Δθ is found to follow an exponential decay, proportional to exp(-Δθ/θ(*)), with characteristic angle θ(*)≈(14°)(b(rms)/B(0))(0.65) for a broad range of guide-field strengths. We find that discontinuities observed in the solar wind can be reproduced by MHD turbulence with reasonable ratios of b(rms)/B(0). We also observe an excess of small angular discontinuities when Δx becomes small, possibly indicating an increasing statistical significance of dissipation-scale structures. The structure of the pdf in this case closely resembles the two-population pdf seen in the solar wind. We thus propose that strong discontinuities are associated with inertial-range MHD turbulence, while weak discontinuities emerge from dissipation-range turbulence. In addition, we find that the structure functions of the magnetic field direction exhibit anomalous scaling exponents, which indicates the existence of intermittent structures.

  5. MHD discontinuities in solar flares: continuous transitions and plasma heating

    Science.gov (United States)

    Ledentsov, Leonid; Somov, Boris

    The conservation laws on a surface of discontinuity in the ideal magnetohydrodynamics (MHD) allow changing a discontinuity type with gradual (continuous) changes in conditions of plasma. Then there are the so-called transition solutions that satisfy simultaneously two types of discontinuities. We obtain all transition solutions on the basis of a complete system of boundary conditions for the MHD equations. We also found an expression describing a jump of internal energy of the plasma flowing through the discontinuity. It allows, firstly, to construct a generalized scheme of possible transitions between MHD discontinuities, and secondly, to examine the dependence of plasma heating by plasma density and configuration of the magnetic field near the surface of the discontinuity (i.e., by the type of the MHD discontinuity). The problem of the heating of "superhot" plasma (with the electron temperature is greater than 10 keV) in solar flares are discussed. It is shown that the best conditions for heating are carried out in the vicinity of the reconnecting current layer near the areas of reverse currents. Bibl.: B.V.Somov. Plasma Astrophysics, Part II: Reconnection and Flares, Second Edition. (New York: Springer SBM, 2013).

  6. Mixing of discontinuously deforming media

    CERN Document Server

    Smith, Lachlan D; Lester, Daniel R; Metcalfe, Guy

    2016-01-01

    Mixing of materials is fundamental to many natural phenomena and engineering applications. The presence of discontinuous deformations - such as shear banding or wall slip - creates new mechanisms for mixing and transport beyond those predicted by classical dynamical systems theory. Here we show how a novel mixing mechanism combining stretching with cutting and shuffling yields exponential mixing rates, quantified by a positive Lyapunov exponent, an impossibility for systems with cutting and shuffling alone or bounded systems with stretching alone, and demonstrate it in a fluid flow. While dynamical systems theory provides a framework for understanding mixing in smoothly deforming media, a theory of discontinuous mixing is yet to be fully developed. New methods are needed to systematize, explain and extrapolate measurements on systems with discontinuous deformations. Here we investigate 'webs' of Lagrangian discontinuities and show that they provide a template for the overall transport dynamics. Considering sl...

  7. An ensemble average method to estimate absolute TEC using radio beacon-based differential phase measurements: Applicability to regions of large latitudinal gradients in plasma density

    Science.gov (United States)

    Thampi, Smitha V.; Bagiya, Mala S.; Chakrabarty, D.; Acharya, Y. B.; Yamamoto, M.

    2014-12-01

    A GNU Radio Beacon Receiver (GRBR) system for total electron content (TEC) measurements using 150 and 400 MHz transmissions from Low-Earth Orbiting Satellites (LEOS) is fabricated in house and made operational at Ahmedabad (23.04°N, 72.54°E geographic, dip latitude 17°N) since May 2013. This system receives the 150 and 400 MHz transmissions from high-inclination LEOS. The first few days of observations are presented in this work to bring out the efficacy of an ensemble average method to convert the relative TECs to absolute TECs. This method is a modified version of the differential Doppler-based method proposed by de Mendonca (1962) and suitable even for ionospheric regions with large spatial gradients. Comparison of TECs derived from a collocated GPS receiver shows that the absolute TECs estimated by this method are reliable estimates over regions with large spatial gradient. This method is useful even when only one receiving station is available. The differences between these observations are discussed to bring out the importance of the spatial differences between the ionospheric pierce points of these satellites. A few examples of the latitudinal variation of TEC during different local times using GRBR measurements are also presented, which demonstrates the potential of radio beacon measurements in capturing the large-scale plasma transport processes in the low-latitude ionosphere.

  8. Discontinuous Mode Power Supply

    Science.gov (United States)

    Lagadinos, John; Poulos, Ethel

    2012-01-01

    A document discusses the changes made to a standard push-pull inverter circuit to avoid saturation effects in the main inverter power supply. Typically, in a standard push-pull arrangement, the unsymmetrical primary excitation causes variations in the volt second integral of each half of the excitation cycle that could lead to the establishment of DC flux density in the magnetic core, which could eventually cause saturation of the main inverter transformer. The relocation of the filter reactor normally placed across the output of the power supply solves this problem. The filter reactor was placed in series with the primary circuit of the main inverter transformer, and is presented as impedance against the sudden changes on the input current. The reactor averaged the input current in the primary circuit, avoiding saturation of the main inverter transformer. Since the implementation of the described change, the above problem has not reoccurred, and failures in the main power transistors have been avoided.

  9. Contribution of strong discontinuities to the power spectrum of the solar wind.

    Science.gov (United States)

    Borovsky, Joseph E

    2010-09-10

    Eight and a half years of magnetic field measurements (2(22) samples) from the ACE spacecraft in the solar wind at 1 A.U. are analyzed. Strong (large-rotation-angle) discontinuities in the solar wind are collected and measured. An artificial time series is created that preserves the timing and amplitudes of the discontinuities. The power spectral density of the discontinuity series is calculated and compared with the power spectral density of the solar-wind magnetic field. The strong discontinuities produce a power-law spectrum in the "inertial subrange" with a spectral index near the Kolmogorov -5/3 index. The discontinuity spectrum contains about half of the power of the full solar-wind magnetic field over this "inertial subrange." Warnings are issued about the significant contribution of discontinuities to the spectrum of the solar wind, complicating interpretation of spectral power and spectral indices.

  10. Delta-Measure Perturbations of a Contact Discontinuity

    Science.gov (United States)

    Baty, Roy

    2012-11-01

    In this presentation, nonstandard analysis is applied to study generalized function perturbations of contact discontinuities in compressible, inviscid fluids. Nonstandard analysis is an area of modern mathematics that studies extensions of the real number system to nonstandard number systems that contain infinitely large and infinitely small numbers. Perturbations of a contact discontinuity are considered that represent one-dimensional analogs of the two-dimensional perturbations observed in the initial evolution of a Richtmyer-Meshkov instability on a density interface. Nonstandard predistributions of the Dirac delta measure and its derivatives are applied as the perturbations of a contact discontinuity. The one-dimensional Euler equations are used to model the flow field of a fluid containing a perturbed density interface and generalized solutions are constructed for the perturbed flow field.

  11. Mixing of discontinuously deforming media

    Science.gov (United States)

    Smith, L. D.; Rudman, M.; Lester, D. R.; Metcalfe, G.

    2016-02-01

    Mixing of materials is fundamental to many natural phenomena and engineering applications. The presence of discontinuous deformations—such as shear banding or wall slip—creates new mechanisms for mixing and transport beyond those predicted by classical dynamical systems theory. Here, we show how a novel mixing mechanism combining stretching with cutting and shuffling yields exponential mixing rates, quantified by a positive Lyapunov exponent, an impossibility for systems with cutting and shuffling alone or bounded systems with stretching alone, and demonstrate it in a fluid flow. While dynamical systems theory provides a framework for understanding mixing in smoothly deforming media, a theory of discontinuous mixing is yet to be fully developed. New methods are needed to systematize, explain, and extrapolate measurements on systems with discontinuous deformations. Here, we investigate "webs" of Lagrangian discontinuities and show that they provide a template for the overall transport dynamics. Considering slip deformations as the asymptotic limit of increasingly localised smooth shear, we also demonstrate exactly how some of the new structures introduced by discontinuous deformations are analogous to structures in smoothly deforming systems.

  12. Analysing the effect of stand density and site conditions on structure and growth of oak species using Nelder trials along an environmental gradient: experimental design, evaluation methods, and results

    Institute of Scientific and Technical Information of China (English)

    Enno; Uhl; Peter; Biber; Matthias; Ulbricht; Michael; Heym; Tamás; Horváth; Ferenc; Lakatos; Janós; Gál; Leonhard; Steinacker; Giustino; Tonon; Maurizio; Ventura; Hans; Pretzsch

    2015-01-01

    Background: Most current approaches in forest science and practice require information about structure and growth of individual trees rather than- or in addition to- sum and mean values of growth and yield at forest stand level as provided by classic experimental designs. By inventing the wheel design, Nelder provided the possibility to turn to the individual tree as basic information unit. Such trials provide valuable insights into the dependency of growth on stand density at particular sites.Methods: Here, we present an extension of the original design and evaluation by Nelder.(i) We established Nelder wheels along an environmental gradient through Europe in atlantic climate in Belgium and Germany, Mediterranean climate in Italy, continental climate in Hungary as well as on high land climate in Mexico. Such disjunct Nelder wheels along an environmental gradient can be regarded and analysed as a two-factor design with the factors of site condition and stand density.(ii) We present an advanced statistical approach to evaluate density dependent growth dynamics of trees planted in form of the Nelder design, which considers spatio-temporal autocorrelation.(iii)We prove the usefulness of the methods in improving ecological theory concerning density related productivity,trade-offs between facilitation and competition, and allometric relations between size variables.Results: First evaluations based on remeasured Nelder wheels in oak(Quercus robur L.) show a size growth differentiation during the first observation period. In particular, height growth is accelerated under higher competition indicating facilitation effects. We detect furthermore a high variability in allometric relations.Conclusions: The proposed design, methods, and results are discussed regarding their impact on forest practice,model building, and ecological theory. We conclude that the extended Nelder approach is highly efficient in providing currently lacking individual tree level information.

  13. Analysing the effect of stand density and site conditions on structure and growth of oak species using Nelder trials along an environmental gradient: experimental design, evaluation methods, and results

    Directory of Open Access Journals (Sweden)

    Enno Uhl

    2015-05-01

    Full Text Available Background Most current approaches in forest science and practice require information about structure and growth of individual trees rather than - or in addition to - sum and mean values of growth and yield at forest stand level as provided by classic experimental designs. By inventing the wheel design, Nelder provided the possibility to turn to the individual tree as basic information unit. Such trials provide valuable insights into the dependency of growth on stand density at particular sites. Methods Here, we present an extension of the original design and evaluation by Nelder. (i We established Nelder wheels along an environmental gradient through Europe in atlantic climate in Belgium and Germany, Mediterranean climate in Italy, continental climate in Hungary as well as on high land climate in Mexico. Such disjunct Nelder wheels along an environmental gradient can be regarded and analysed as a two-factor design with the factors of site condition and stand density. (ii We present an advanced statistical approach to evaluate density dependent growth dynamics of trees planted in form of the Nelder design, which considers spatio-temporal autocorrelation. (iii We prove the usefulness of the methods in improving ecological theory concerning density related productivity, trade-offs between facilitation and competition, and allometric relations between size variables. Results First evaluations based on remeasured Nelder wheels in oak (Quercus roburL. show a size growth differentiation during the first observation period. In particular, height growth is accelerated under higher competition indicating facilitation effects. We detect furthermore a high variability in allometric relations. Conclusions The proposed design, methods, and results are discussed regarding their impact on forest practice, model building, and ecological theory. We conclude that the extended Nelder approach is highly efficient in providing currently lacking individual tree level

  14. Generating substrate bound functional chemokine gradients in vitro

    DEFF Research Database (Denmark)

    Hjortø, Gertrud Malene; Hansen, Morten; Larsen, Niels Bent;

    2009-01-01

    Microcontact printing (mCP) is employed to generate discontinuous microscale gradients of active fractalkine, a chemokine expressed by endothelial cells near sites of inflammation where it is believed to form concentration gradients descending away from the inflamed area. In vivo, fractalkine is ...

  15. The structure of rotational discontinuities

    Energy Technology Data Exchange (ETDEWEB)

    Neugebauer, M. (California Institute of Technology, Pasadena (USA))

    1989-11-01

    This study examines the structures of a set of rotational discontinuities detected in the solar wind by the ISEE-3 spacecraft. It is found that the complexity of the structure increases as the angle {theta} between the propagation vector k and the magnetic field decreases. For rotational discontinuities that propagate at a large angle to the field with an ion (left-hand) sense of rotation, the magnetic hodograms tend to be flattened, in agreement with prior numerical simulations. When {theta} is large, angular overshoots are often observed at one or both ends of the discontinuity. When the propagation is nearly parallel to the field (i.e., when {theta} is small), many different types of structure are seen, ranging from straight lines, the S-shaped curves, to complex, disorganized shapes.

  16. Desvio da proporção de sexo e da integridade do DNA dos espermatozóides bovinos centrifugados em gradientes de densidade contínuos Alteration of sex ratio and DNA integrity of bovine sperm centrifuged in continuous density gradients

    Directory of Open Access Journals (Sweden)

    Alberto Lopes Gusmão

    2010-03-01

    Full Text Available O objetivo, neste trabalho, foi verificar o desvio da proporção de sexo e a presença de fragmentação do DNA, pela técnica de TUNEL (“In situ terminal deoxinucleotidyl transferase mediated dUTP nick end labeling assay”, em espermatozoides bovinos centrifugados em gradientes de densidade de Percoll ou OptiPrep durante a separação espermática. Doses de sêmen de touros foram descongeladas, e cerca de 40 milhões de espermatozoides foram depositados sobre cada gradiente de densidade compostos por Percoll ou OptiPrep com três camadas entre 1.110g/mL e 1.123g/mL, em tubos de 15mL, em que permaneceram por 24h a 4°C antes da deposição dos espermatozoides. Os tubos foram centrifugados a 500xg por 15min a 22°C. Os sobrenadantes foram aspirados, e os sedimentos, recuperados para verificação da fragmentação do DNA pela técnica de TUNEL. Obteve-se um desvio dos embriões produzidos in vitro para fêmeas no gradiente de Percoll (62% de fêmeas, em relação aos grupos OptiPrep e Controle (47,1 e 48,7% de fêmeas, respectivamente. Não foi detectada fragmentação do DNA dos espermatozoides nas amostras centrifugadas, tanto no gradiente de Percoll quanto de OptiPrep. Dessa forma, foi possível realizar a sexagem espermática, com uma maior porcentagem de espermatozoides X do que o grupo controle, por meio de metodologia mais simples e sem provocar danos ao DNA dos espermatozoides.The objective of the present study was to verify the sex ratio and presence of DNA fragmentation by TUNEL technique (In situ terminal deoxinucleotidyl transferase mediated dUTP nick end labeling assay in bovine spermatozoa centrifuged in density gradients of Percoll or OptiPrep during the sperm separation. Approximately 40 million of frozen/thawed bovine spermatozoa were deposited on each density gradient composed of Percoll or OptiPrep with three layers ranging from 1.110g/mL to 1.123g/mL in polystyrene tubes of 15mL. The tubes were kept at 4°C for 24h before

  17. The urban land price and its regional differences in China based on density gradient%基于密度梯度曲线的中国城市地价特征及区域差异

    Institute of Scientific and Technical Information of China (English)

    杨奎奇; 汪应宏; 张绍良; 赵清

    2012-01-01

    选取超大型综合性城市以外的全国不同区域和职能类型的33个城市为样本,采用地价密度梯度曲线模型,对其进行曲线回归分析,得出各城市商业、住宅地价的中心值和曲率系数。分析发现现阶段我国城市地价密度梯度曲线总体上符合城市地价变动的一般规律:城市中心地价与城市规模呈正相关关系;曲率系数与城市规模呈负相关关系;商业地价曲线曲率系数比住宅地价曲线曲率系数高。再此基础上对地价梯度曲线曲率系数进行聚类分析,总结出中国城市地价的不同类型特征。另外通过对我国东中西部30个城市样本的地价梯度系数的统计分析,从空间差异角度发现三类地区的地价呈现不同特征规律。%Taking 33 cities from different regions and categories in China as research ob- jects, this essay carries out land price curve regression analysis to simulate their land price density gradient. Then some coefficients of density gradient curve of urban commercial and residential land price are obtained. According to these coefficients, the phenomenon of Chinese urban land price density curves adapting to the normal rules of market economic countries is observed through analysis, which indicates that the city land price can reflect the true value of land, the main method of allocation of land resource in China through 30 years of marketing reform. Moreover, the conclusion that land price density gradients have different categories in China has been drawn based on clustering analysis of commer- cial and residential curve curvature. According to the commercial land price curve curva- ture and residential land price curvature, the cities in China except multi-center cities such as Beijing and Shanghai, are identified into four types. Every type of city is corresponding separately to different levels of development, city capacity, economic scale and parameters of land price curvature

  18. Constrained Optimization of Discontinuous Systems

    OpenAIRE

    Y.M. Ermoliev; V.I. Norkin

    1996-01-01

    In this paper we extend the results of Ermoliev, Norkin and Wets [8] and Ermoliev and Norkin [7] to the case of constrained discontinuous optimization problems. In contrast to [7] the attention is concentrated on the proof of general optimality conditions for problems with nonconvex feasible sets. Easily implementable random search technique is proposed.

  19. NUMERICAL SIMULATION OF SHOCK WAVE REFRACTION ON INCLINED CONTACT DISCONTINUITY

    Directory of Open Access Journals (Sweden)

    P. V. Bulat

    2016-05-01

    Full Text Available We consider numerical simulation of shock wave refraction on plane contact discontinuity, separating two gases with different density. Discretization of Euler equations is based on finite volume method and WENO finite difference schemes, implemented on unstructured meshes. Integration over time is performed with the use of the third-order Runge–Kutta stepping procedure. The procedure of identification and classification of gas dynamic discontinuities based on conditions of dynamic consistency and image processing methods is applied to visualize and interpret the results of numerical calculations. The flow structure and its quantitative characteristics are defined. The results of numerical and experimental visualization (shadowgraphs, schlieren images, and interferograms are compared.

  20. Monotonicity Formula and Regularity for General Free Discontinuity Problems

    Science.gov (United States)

    Bucur, Dorin; Luckhaus, Stephan

    2014-02-01

    We give a general monotonicity formula for local minimizers of free discontinuity problems which have a critical deviation from minimality, of order d - 1. This result allows us to prove partial regularity results (that is closure and density estimates for the jump set) for a large class of free discontinuity problems involving general energies associated to the jump set, as for example free boundary problems with Robin conditions. In particular, we give a short proof to the De Giorgi-Carriero-Leaci result for the Mumford-Shah functional.

  1. Density functional theory investigation of hydrogen bonding effects on the oxygen, nitrogen and hydrogen electric field gradient and chemical shielding tensors of anhydrous chitosan crystalline structure.

    Science.gov (United States)

    Esrafili, Mehdi D; Elmi, Fatemeh; Hadipour, Nasser L

    2007-02-08

    A systematic computational investigation was carried out to characterize the 17O, 14N and 2H electric field gradient, EFG, as well as 17O, 15N, 13C and 1H chemical shielding tensors in the anhydrous chitosan crystalline structure. To include the hydrogen-bonding effects in the calculations, the most probable interacting molecules with the target molecule in the crystalline phase were considered through a hexameric cluster. The computations were performed with the B3LYP method and 6-311++G(d,p) and 6-31++G(d,p) standard basis sets using the Gaussian 98 suite of programs. Calculated EFG and chemical shielding tensors were used to evaluate the 17O, 14N and 2H nuclear quadrupole resonance, NQR, and 17O, 15N, 13C and 1H nuclear magnetic resonance, NMR, parameters in the hexameric cluster, which are in good agreement with the available experimental data. The difference between the calculated NQR and NMR parameters of the monomer and hexamer cluster shows how much hydrogen bonding interactions affect the EFG and chemical shielding tensors of each nucleus. These results indicate that both O(3)-H(33)...O(5-3) and N-H(22)...O(6-4) hydrogen bonding have a major influence on NQR and NMR parameters. Also, the quantum chemical calculations indicate that the intra- and intermolecular hydrogen bonding interactions play an essential role in determining the relative orientation of EFG and chemical shielding principal components in the molecular frame axes.

  2. Second order finite volume scheme for Maxwell's equations with discontinuous electromagnetic properties on unstructured meshes

    Energy Technology Data Exchange (ETDEWEB)

    Ismagilov, Timur Z., E-mail: ismagilov@academ.org

    2015-02-01

    This paper presents a second order finite volume scheme for numerical solution of Maxwell's equations with discontinuous dielectric permittivity and magnetic permeability on unstructured meshes. The scheme is based on Godunov scheme and employs approaches of Van Leer and Lax–Wendroff to increase the order of approximation. To keep the second order of approximation near dielectric permittivity and magnetic permeability discontinuities a novel technique for gradient calculation and limitation is applied near discontinuities. Results of test computations for problems with linear and curvilinear discontinuities confirm second order of approximation. The scheme was applied to modelling propagation of electromagnetic waves inside photonic crystal waveguides with a bend.

  3. A Least Squares Collocation Approach with GOCE gravity gradients for regional Moho-estimation

    Science.gov (United States)

    Rieser, Daniel; Mayer-Guerr, Torsten

    2014-05-01

    The depth of the Moho discontinuity is commonly derived by either seismic observations, gravity measurements or combinations of both. In this study, we aim to use the gravity gradient measurements of the GOCE satellite mission in a Least Squares Collocation (LSC) approach for the estimation of the Moho depth on regional scale. Due to its mission configuration and measurement setup, GOCE is able to contribute valuable information in particular in the medium wavelengths of the gravity field spectrum, which is also of special interest for the crust-mantle boundary. In contrast to other studies we use the full information of the gradient tensor in all three dimensions. The problem outline is formulated as isostatically compensated topography according to the Airy-Heiskanen model. By using a topography model in spherical harmonics representation the topographic influences can be reduced from the gradient observations. Under the assumption of constant mantle and crustal densities, surface densities are directly derived by LSC on regional scale, which in turn are converted in Moho depths. First investigations proofed the ability of this method to resolve the gravity inversion problem already with a small amount of GOCE data and comparisons with other seismic and gravitmetric Moho models for the European region show promising results. With the recently reprocessed GOCE gradients, an improved data set shall be used for the derivation of the Moho depth. In this contribution the processing strategy will be introduced and the most recent developments and results using the currently available GOCE data shall be presented.

  4. A Wavelet-Based Assessment of Topographic-Isostatic Reductions for GOCE Gravity Gradients

    Science.gov (United States)

    Grombein, Thomas; Luo, Xiaoguang; Seitz, Kurt; Heck, Bernhard

    2014-07-01

    Gravity gradient measurements from ESA's satellite mission Gravity field and steady-state Ocean Circulation Explorer (GOCE) contain significant high- and mid-frequency signal components, which are primarily caused by the attraction of the Earth's topographic and isostatic masses. In order to mitigate the resulting numerical instability of a harmonic downward continuation, the observed gradients can be smoothed with respect to topographic-isostatic effects using a remove-compute-restore technique. For this reason, topographic-isostatic reductions are calculated by forward modeling that employs the advanced Rock-Water-Ice methodology. The basis of this approach is a three-layer decomposition of the topography with variable density values and a modified Airy-Heiskanen isostatic concept incorporating a depth model of the Mohorovičić discontinuity. Moreover, tesseroid bodies are utilized for mass discretization and arranged on an ellipsoidal reference surface. To evaluate the degree of smoothing via topographic-isostatic reduction of GOCE gravity gradients, a wavelet-based assessment is presented in this paper and compared with statistical inferences in the space domain. Using the Morlet wavelet, continuous wavelet transforms are applied to measured GOCE gravity gradients before and after reducing topographic-isostatic signals. By analyzing a representative data set in the Himalayan region, an employment of the reductions leads to significantly smoothed gradients. In addition, smoothing effects that are invisible in the space domain can be detected in wavelet scalograms, making a wavelet-based spectral analysis a powerful tool.

  5. Keutuhan Membran Spermatozoa Disekuensing Sentrifugasi Gradien Densitas Percoll Berpengencer Andromed dan CEP-2 yang Ditambahkan Kuning Telur (MEMBRANE INTACT OF SPERMATOZOA FOLLOWING SEXING USING PERCOLL DENSITY GRADIENT CENTRIFUGATION IN ANDROMED AND C

    Directory of Open Access Journals (Sweden)

    Yudha Fika Diliyana

    2014-05-01

    Full Text Available The aim of this study was to observe the best extender in protecting the membrane of bovine spermatozoafollowing sexing by percoll density gradient centrifugation. Freshly collected semen were obtained fromBalai Besar Inseminasi Buatan Singosari-Malang. The semen were diluted in andromed and CaudalEpididymal Plasma-2 (CEP-2 added with 10% egg yolk extenders.The sperm membrane integrity wasobserved using Hypo-osmotic Swelling Test (HOST. Sperm capacitation and acrososome reaction wereassessed using Chlortetracycline Fluorescence Assay.The results showed that andromed and CEP-2 addedwith 10% egg yolk were able to retain the sperm membrane integrity, whereas sperm capacitation andacrosome reaction were kept low. Caudal Epididymal Plasma-2 (CEP-2 added with 10% egg yolk seemedto give better protection towards the sperm membrane intact in comparison to andromed extender.

  6. Discontinuation of denosumab and associated fracture incidence

    DEFF Research Database (Denmark)

    Brown, Jacques P; Roux, Christian; Törring, Ove;

    2012-01-01

    Osteoporosis is a chronic disease and requires long-term treatment with pharmacologic therapy to ensure sustained anti-fracture benefit. Denosumab reduced the risk for new vertebral, nonvertebral, and hip fractures over 36 months in the FREEDOM trial. While discontinuation of denosumab has been...... associated with transient increases in bone remodeling and declines in bone mineral density (BMD), the effect on fracture risk during treatment cessation is not as well characterized. To understand the fracture incidence between treatment groups after cessation of investigational product, we evaluated...... of 797 subjects (470 placebo, 327 denosumab), who were evaluable during the off-treatment period, showed similar baseline characteristics for age, prevalent fracture, and lumbar spine and total hip BMD T-scores. During treatment, more placebo-treated subjects as compared with denosumab-treated subjects...

  7. Strategies for discontinuation of proton pump inhibitors

    DEFF Research Database (Denmark)

    Haastrup, Peter; Paulsen, Maja S; Begtrup, Luise M

    2014-01-01

    PURPOSE: Proton pump inhibitors (PPIs) are considered to be overprescribed. Consensus on how to attempt discontinuation is, however, lacking. We therefore conducted a systematic review of clinical studies on discontinuation of PPIs. METHODS: Systematic review based on clinical studies investigating...

  8. Discontinuities in recurrent neural networks.

    Science.gov (United States)

    Gavaldá, R; Siegelmann, H T

    1999-04-01

    This article studies the computational power of various discontinuous real computational models that are based on the classical analog recurrent neural network (ARNN). This ARNN consists of finite number of neurons; each neuron computes a polynomial net function and a sigmoid-like continuous activation function. We introduce arithmetic networks as ARNN augmented with a few simple discontinuous (e.g., threshold or zero test) neurons. We argue that even with weights restricted to polynomial time computable reals, arithmetic networks are able to compute arbitrarily complex recursive functions. We identify many types of neural networks that are at least as powerful as arithmetic nets, some of which are not in fact discontinuous, but they boost other arithmetic operations in the net function (e.g., neurons that can use divisions and polynomial net functions inside sigmoid-like continuous activation functions). These arithmetic networks are equivalent to the Blum-Shub-Smale model, when the latter is restricted to a bounded number of registers. With respect to implementation on digital computers, we show that arithmetic networks with rational weights can be simulated with exponential precision, but even with polynomial-time computable real weights, arithmetic networks are not subject to any fixed precision bounds. This is in contrast with the ARNN that are known to demand precision that is linear in the computation time. When nontrivial periodic functions (e.g., fractional part, sine, tangent) are added to arithmetic networks, the resulting networks are computationally equivalent to a massively parallel machine. Thus, these highly discontinuous networks can solve the presumably intractable class of PSPACE-complete problems in polynomial time.

  9. Exact maps in density functional theory for lattice models

    Science.gov (United States)

    Dimitrov, Tanja; Appel, Heiko; Fuks, Johanna I.; Rubio, Angel

    2016-08-01

    In the present work, we employ exact diagonalization for model systems on a real-space lattice to explicitly construct the exact density-to-potential and graphically illustrate the complete exact density-to-wavefunction map that underly the Hohenberg-Kohn theorem in density functional theory. Having the explicit wavefunction-to-density map at hand, we are able to construct arbitrary observables as functionals of the ground-state density. We analyze the density-to-potential map as the distance between the fragments of a system increases and the correlation in the system grows. We observe a feature that gradually develops in the density-to-potential map as well as in the density-to-wavefunction map. This feature is inherited by arbitrary expectation values as functional of the ground-state density. We explicitly show the excited-state energies, the excited-state densities, and the correlation entropy as functionals of the ground-state density. All of them show this exact feature that sharpens as the coupling of the fragments decreases and the correlation grows. We denominate this feature as intra-system steepening and discuss how it relates to the well-known inter-system derivative discontinuity. The inter-system derivative discontinuity is an exact concept for coupled subsystems with degenerate ground state. However, the coupling between subsystems as in charge transfer processes can lift the degeneracy. An important conclusion is that for such systems with a near-degenerate ground state, the corresponding cut along the particle number N of the exact density functionals is differentiable with a well-defined gradient near integer particle number.

  10. Continuous and Discontinuous Modelling of Fracture in Concrete Using FEM

    CERN Document Server

    Tejchman, Jacek

    2013-01-01

    The book analyzes a quasi-static fracture process in concrete and reinforced concrete by means of constitutive models formulated within continuum mechanics. A continuous and discontinuous modelling approach was used. Using a continuous approach, numerical analyses were performed using a finite element method and three different enhanced continuum models: isotropic elasto-plastic, isotropic damage and anisotropic smeared crack one. The models were equipped with a characteristic length of micro-structure by means of a non-local and a second-gradient theory. So they could properly describe the formation of localized zones with a certain thickness and spacing and a related deterministic size effect. Using a discontinuous FE approach, numerical results of cracks using a cohesive crack model and XFEM were presented which were also properly regularized. Finite element analyses were performed with concrete elements under monotonic uniaxial compression, uniaxial tension, bending and shear-extension. Concrete beams un...

  11. Discontinuous mixed covolume methods for parabolic problems.

    Science.gov (United States)

    Zhu, Ailing; Jiang, Ziwen

    2014-01-01

    We present the semidiscrete and the backward Euler fully discrete discontinuous mixed covolume schemes for parabolic problems on triangular meshes. We give the error analysis of the discontinuous mixed covolume schemes and obtain optimal order error estimates in discontinuous H(div) and first-order error estimate in L(2).

  12. Movement of trichloroethene in a discontinuous permafrost zone.

    Science.gov (United States)

    Carlson, Andrea E; Barnes, David L

    2011-06-01

    At a site with discontinuous permafrost in Fairbanks, Alaska, releases of trichloroethene (TCE), an industrial solvent, have caused contamination of the groundwater. The objective of this study was to investigate the relationship between the migration pathway of the TCE groundwater plume and the distribution of the discontinuous permafrost at the site. The TCE plume configuration is substantially different than what regional hydrology trends would predict. Using GIS, we conducted a geostatistical analysis of field data collected during soil-boring installations and groundwater monitoring well sampling. With the analysis results, we constructed maps of the permafrost-table elevation (top of permafrost) and of the groundwater gradients and TCE concentrations from multiyear groundwater sampling events. The plume concentrations and groundwater gradients were overlain on the permafrost map to correlate permafrost locations with groundwater movement and the spatial distribution of TCE moving with groundwater. Correlation of the overlay maps revealed converging and diverging groundwater flow in response to the permafrost-table distribution, the absence of groundwater contamination in areas with a high permafrost-table elevation, and channeling of contaminants and water between areas of permafrost. In addition, we measured groundwater elevations in nested wells to quantify vertical gradients affecting TCE migration. At one set of nested wells down gradient from an area of permafrost we measured an upward vertical gradient indicating recharge of groundwater from the subpermafrost region of the aquifer causing dilution of the plume. The study indicates that the variable distribution of the permafrost is affecting the way groundwater and TCE move through the aquifer. Consequently, changes to the permafrost configuration due to thawing would likely affect both groundwater movement and TCE migration, and areas that were contaminant-free may become susceptible to contamination.

  13. Enrichment of Fetal Nucleated Red Blood Cell in Peripheral Blood of Pregnant Woman by Joint Use of Density Gradient Centrifugation and Keihuaer Acid-fast Staining%密度梯度离心结合Keihuaer抗酸染色法富集孕妇外周血中FNRBC的研究

    Institute of Scientific and Technical Information of China (English)

    何国平; 刘雨生; 童先宏; 郑圣霞; 张荣; 王念念; 吴丽敏; 周桂香

    2009-01-01

    Objective To investigate and establish a simple, rapid and lower-cost method to enrich fetal nucleated red blood cell(FNRBC) in peripheral blood of pregnant woman. Methods About 10 ml of peripheral blood sample from 18 pregnant women with gestational weeks arranged from 8 to 16 was collected, and then subjected to the discontinuous density gradient centrifugation. After the primary cell isolation, Keihuaer acid-fast staining method was used to mark the isolated cells previously spread on the slides. The special morphocytology and colour staining of FNRBC could be distinctly distinguished from the surrounding mother cells. Following that, the special antibody against fetal hemoglobin was further used to validate the fetus-originated characteristics for the positive FNRBC staining slides.Results After dealing with Keihuaer acid-fast staining, the cytoplasm of positive FNRBC was stained to be scarlet,nucleolus to be blue,while the cytoplasm of mother cells were colorless. The positive FNRBC were detected in 14 of 18 healthy pregnant women, average 1 to 6 cells per case,the positive rate was 77.8%. The same experimental results was further validated with the special antibody against fetal hemoglobin immunocytochemical staining,the diagnose accordance rate was 100.0%. Conclusions The density gradient centrifugation,together with Keihuaer acid-fast staining were highly special for the enrichment of FNRBC in peripheral blood of pregnant woman. The practical operation of this method was simple,fast and the future investigations would hopefully prove its worth in the clinical application of noninvasive prenatal diagnosis of gene disorders.%目的 探索建立一种简便、快速、较低成本的用于孕妇外周血胎儿有核红细胞(FNRBC)富集的实验方法.方法 采集18名孕周在8~16周的孕妇外周血10 ml,经Percoll不连续密度梯度离心初步分离后,运用Keihuaer抗酸染色法对玻片上的细胞进行染色标记,显微镜下观察、辨

  14. Hydro-mechanical modeling of impermeable discontinuity in rock by extended finite element method

    Institute of Scientific and Technical Information of China (English)

    郑安兴; 罗先启

    2015-01-01

    The extended finite element method(XFEM) is a numerical method for modeling discontinuities within the classical finite element framework. The computation mesh in XFEM is independent of the discontinuities, such that remeshing for moving discontinuities can be overcome. The extended finite element method is presented for hydro-mechanical modeling of impermeable discontinuities in rock. The governing equation of XFEM for hydraulic fracture modeling is derived by the virtual work principle of the fracture problem considering the water pressure on crack surface. The coupling relationship between water pressure gradient on crack surface and fracture opening width is obtained by semi-analytical and semi-numerical method. This method simplifies coupling analysis iteration and improves computational precision. Finally, the efficiency of the proposed method for modeling hydraulic fracture problems is verified by two examples and the advantages of the XFEM for hydraulic fracturing analysis are displayed.

  15. Observations of double discontinuities in the magnetotail

    Science.gov (United States)

    Whang, Y. C.; Fairfield, D.; Smith, E. J.; Lepping, R. P.; Kokubun, S.; Saito, Y.

    Observations of slow shocks in the Earth's magnetotail at the plasma sheet-lobe boundaries have been well documented. We restudy the magnetic field data of two slow shocks: one was observed from Geotail on January 17, 1994 at XGSE = -92 RE, and another was observed from ISEE-3 on February 2, 1983 at XGSE = -220 RE. In both cases, the slow shock layer was followed by an adjoining rotational discontinuity layer on the postshock side. Compound structures each composed of a slow shock layer and an adjoining rotational discontinuity layer have been recently observed in interplanetary space from Wind, Geotail and Imp-8. Because the two successive discontinuities are very close to each other, the compound structure looks like a new kind of MHD discontinuity. It may be called a double discontinuity. Since double discontinuities exist not only in interplanetary space but also in the magnetotail region, they could be a general MHD structure in space plasma.

  16. An investigation of hydrogen-bonding effects on the nitrogen and hydrogen electric field gradient and chemical shielding tensors in the 9-methyladenine real crystalline structure: a density functional theory study.

    Science.gov (United States)

    Mirzaei, Mahmoud; Hadipour, Nasser L

    2006-04-13

    Hydrogen-bonding effects in the real crystalline structure of 9-methyladenine, 9-MA, were studied using calculated electric field gradient, EFG, and chemical shielding, CS, tensors for nitrogen and hydrogen nuclei via density functional theory. The calculations were carried out at the B3LYP and B3PW91 levels with the 6-311++G basis set via the Gaussian 98 package. Nuclear quadrupole coupling constants, C(Q), and asymmetry parameters, eta(Q), are reported for (14)N and (2)H. The chemical shielding anisotropy, Deltasigma, and chemical shielding isotropy, sigma(iso), are also reported for (15)N and (1)H. The difference between the calculated parameters of the monomer and heptameric layer-like cluster 9-MA shows how much H-bonding interactions affect the EFG and CS tensors of each nucleus. This result indicates that N(10) (imino nitrogen) has a major role in H-bonding interactions, whereas that of N(9) is negligible. There is good agreement between the present calculated parameters and reported experimental data. Although some discrepancies were observed, this could be attributed to the different conditions which were applied for calculation and the experiments.

  17. Rev1, Rev3, or Rev7 siRNA Abolishes Ultraviolet Light-Induced Translesion Replication in HeLa Cells: A Comprehensive Study Using Alkaline Sucrose Density Gradient Sedimentation

    Directory of Open Access Journals (Sweden)

    Jun Takezawa

    2010-01-01

    Full Text Available When a replicative DNA polymerase stalls upon encountering a lesion on the template strand, it is relieved by other low-processivity polymerase(s, which insert nucleotide(s opposite the lesion, extend by a few nucleotides, and dissociate from the 3′-OH. The replicative polymerase then resumes DNA synthesis. This process, termed translesion replication (TLS or replicative bypass, may involve at least five different polymerases in mammals, although the participating polymerases and their roles have not been entirely characterized. Using siRNAs originally designed and an alkaline sucrose density gradient sedimentation technique, we verified the involvement of several polymerases in ultraviolet (UV light-induced TLS in HeLa cells. First, siRNAs to Rev3 or Rev7 largely abolished UV-TLS, suggesting that these 2 gene products, which comprise Polζ, play a main role in mutagenic TLS. Second, Rev1-targeted siRNA also abrogated UV-TLS, indicating that Rev1 is also indispensable to mutagenic TLS. Third, Polη-targeted siRNA also prevented TLS to a greater extent than our expectations. Forth, although siRNA to Polι had no detectable effect, that to Polκ delayed UV-TLS. To our knowledge, this is the first study reporting apparent evidence for the participation of Polκ in UV-TLS.

  18. Spatially discontinuous ionization phenomenon in inhomogeneous soil

    Institute of Scientific and Technical Information of China (English)

    2010-01-01

    By using X-ray film imaging technology,a phenomenon of discontinuous ionization was observed in the inhomogeneous soil around the grounding electrode on which a surge voltage was applied.A simplified two-phase solid-gas model was built to study the electric field distribution in the soil to explain the discontinuous ionization phenomenon.Analysis showed the differences of the dielectric properties,the shapes and sizes of soil particles can cause discontinuous ionization in the soil.

  19. Enriching the fetal nuclear red blood cells by intervening membrane ionic channels and density gradient centrifugation%干预离子通道联合密度梯度离心富集胎儿有核红细胞

    Institute of Scientific and Technical Information of China (English)

    刘芳; 白亚娜; 张丽娜; 徐向红; 程宁

    2011-01-01

    Objective To investigate the effectiveness of the Nucleated Red Blood Cells' enrichment by intervening membrance ionic channels-K + /Cl- cotransporter and density gradient centrifugation in umbilical cord blood. Methods Setting up optical Intervening condition of maximal change of cell volume from RBCs on umbilical cord blood, the harvest rate of cell enrichment by different density medium centrifugation were determined by flow cytometry. Results Compared to traditional enriching method, the average purity of NRBC enrichment in the umbilical cord blood could take from 8. 6% to 69. 9% by centrifugation of 1. 065 g/L medium and 55. 9% by 1. 099 g/L medium after intervening, which means to respectively increase enrichment of NRBC. Conclusion Both urea intervention and density centrifugation may effectively promote the harvest rate of the NRBC enrichment.%目的 探讨干预膜表面K-CI同向转运体(KCC)离子通道联合密度梯度离心对富集脐血中胎儿有核红细胞(NRBC)的效果.方法 用KCC特异激活剂尿素(Urea)干预细胞膜,建立最大限度缩小细胞体积的干预条件;用最佳干预条件干预脐血后进行不同密度介质下离心富集NRBC,用流式细胞仪计数NRBC的富集效果.结果 比较传统1.077淋巴细胞分离液离心后的单个核细胞层流式细胞仪计数NRBC为8.6%,干预脐血后用1.065密度介质离心后下层NRBC达69.9%,未干预组中用1.099密度介质离心的单个核细胞层NRBC达55.9%,提高了富集量.结论 尿素干预联合密度梯度离心能有效提高NRBC的富集率.

  20. Discontinuities during UV writing of waveguides

    DEFF Research Database (Denmark)

    Svalgaard, Mikael; Harpøth, Anders; Andersen, Marc

    2005-01-01

    UV writing of waveguides can be hampered by discontinuities where the index change process suddenly shuts down. We show that thermal effects may account for this behaviour.......UV writing of waveguides can be hampered by discontinuities where the index change process suddenly shuts down. We show that thermal effects may account for this behaviour....

  1. A generalized discrete strong discontinuity approach

    NARCIS (Netherlands)

    Dias-da-Costa, D.; Alfaiate, J.; Sluys, L.J.; Julio, E.

    2010-01-01

    Several local embedded discontinuity formulations have already been developed, in which constant strain triangles and constant jumps are adopted. However, these formulations lead to jump and traction discontinuity across element boundaries and stress locking effects. Herein, a new contribution to em

  2. An h-adaptive local discontinuous Galerkin method for the Navier-Stokes-Korteweg equations

    Science.gov (United States)

    Tian, Lulu; Xu, Yan; Kuerten, J. G. M.; van der Vegt, J. J. W.

    2016-08-01

    In this article, we develop a mesh adaptation algorithm for a local discontinuous Galerkin (LDG) discretization of the (non)-isothermal Navier-Stokes-Korteweg (NSK) equations modeling liquid-vapor flows with phase change. This work is a continuation of our previous research, where we proposed LDG discretizations for the (non)-isothermal NSK equations with a time-implicit Runge-Kutta method. To save computing time and to capture the thin interfaces more accurately, we extend the LDG discretization with a mesh adaptation method. Given the current adapted mesh, a criterion for selecting candidate elements for refinement and coarsening is adopted based on the locally largest value of the density gradient. A strategy to refine and coarsen the candidate elements is then provided. We emphasize that the adaptive LDG discretization is relatively simple and does not require additional stabilization. The use of a locally refined mesh in combination with an implicit Runge-Kutta time method is, however, non-trivial, but results in an efficient time integration method for the NSK equations. Computations, including cases with solid wall boundaries, are provided to demonstrate the accuracy, efficiency and capabilities of the adaptive LDG discretizations.

  3. DNA replication by a possible continuous--discontinuous mechanism in homogenates of Physarum polycephalum containing dextran

    Energy Technology Data Exchange (ETDEWEB)

    Brewer, E.N.

    1975-01-01

    Nuclear DNA synthesis in homogenates of Physarum is greatly stimulated by the presence of dextran in the homogenizing medium. In this cell-free system, the DNA precursor is incorporated approximately equally into two classes of DNA intermediates. One of these is similar in size to that observed previously in the intact organism, i.e., its sedimentation rate in alkaline sucrose density gradients increases, presumably by chain elongation, as the organism progresses through the S phase. The other class (approx. 10S) is similar to ''Okazaki'' fragments. Thus, nuclear DNA synthesis in homogenates of Physarum may occur by a continuous-discontinuous mechanism. Substantial DNA-synthetic activity is obtained by the addition of dextran to dextran-free homogenates. Maximal activity in this system requires the presence of both the nuclear and post-nuclear supernatant fractions. It is possible that a partial separation and recombination of a DNA polymerase and the endogenous template is effected by this procedure. (auth)

  4. INFLUENCES OF SLOPE GRADIENT ON SOIL EROSION

    Institute of Scientific and Technical Information of China (English)

    刘青泉; 陈力; 李家春

    2001-01-01

    The main factors influencing soil erosion include the net rain excess, the water depth, the velocity, the shear stress of overland flows , and the erosion-resisting capacity of soil. The laws of these factors varying with the slope gradient were investigated by using the kinematic wave theory. Furthermore, the critical slope gradient of erosion was driven. The analysis shows that the critical slope gradient of soil erosion is dependent on grain size , soil bulk density , surface roughness, runoff length, net rain excess, and the friction coefficient of soil, etc. The critical slope gradient has been estimated theoretically with its range between 41. 5 °~ 50°.

  5. Biomimetic Gradient Polymers with Enhanced Damping Capacities.

    Science.gov (United States)

    Wang, Dong; Zhang, Huan; Guo, Jing; Cheng, Beichen; Cao, Yuan; Lu, Shengjun; Zhao, Ning; Xu, Jian

    2016-04-01

    Designing gradient structures, mimicking biological materials, such as pummelo peels and tendon, is a promising strategy for developing advanced materials with superior energy damping capacities. Here a facile and effective approach for fabricating polymers with composition gradients at millimeter length scale is presented. The gradient thiol-ene polymers (TEPs) are created by the use of density difference of ternary thiol-ene-ene precursors and the subsequent photo-crosslinking via thiol-ene reaction. The compositional gradients are analyzed via differential scanning calorimeter (DSC), compressive modulus testing, atomic force microscopy (AFM) indentation, and swelling measurements. In contrast to homogeneous TEPs networks, the resultant gradient polymer shows a broader effective damping temperature range combining with good mechanical properties. The present result provides an effective route toward high damping materials by the fabrication of gradient structures.

  6. Forecasting Technological Discontinuities in the ICT Industry

    DEFF Research Database (Denmark)

    Hoisl, Karin; Stelzer, Tobias; Biala, Stefanie

    2015-01-01

    Building on the existing literature on evolutionary innovation and technological change, this paper aims to identify potential signals of technological discontinuities and to obtain assessments of experts to what extent these signals help them to predict discontinuities. Furthermore, we analyze...... in the ICT industry. The conjoint approach allows for a simulation of the forecasting process and considers utility trade-offs. The results show that for both types of experts the perceived benefit of users most highly contributes to predicting technological discontinuities. Internal experts assign more...... insights to the literature on R&D and innovation management....

  7. Multigrid technique and Optimized Schwarz method on block-structured grids with discontinuous interfaces

    DEFF Research Database (Denmark)

    Kolmogorov, Dmitry; Sørensen, Niels N.; Shen, Wen Zhong;

    2013-01-01

    An Optimized Schwarz method using Robin boundary conditions for relaxation scheme is presented in the frame of Multigrid method on discontinuous grids. At each iteration the relaxation scheme is performed in two steps: one step with Dirichlet and another step with Robin boundary conditions at inner...... block boundaries. A Robin parameter that depends on grid geometry and grid discontinuity at block interfaces is introduced. The general solution algorithm is based on SIMPLE method and a conservative _nite-volume scheme on block-structured grids with discontinuous interfaces. The multigrid method...... is used to obtain the solution of pressure-correction equation where an Incomplete Block LU factorization is used as the relaxation scheme. Solution on the coarsest grid is done with an Incomplete Block LU preconditioned Conjugate Gradient method. Results from computations of laminar ows around a circular...

  8. Discontinuation of Preventive Drugs in General Practice

    DEFF Research Database (Denmark)

    Andersen, John Sahl; Lindberg, Laura Maria Glahder; Nixon, Michael Simon

    the most preventive drugs are prescribed in general practice. Special considerations exist in relation to medication of elderly patients. The prevalence of polypharmacy and the subsequent increased risk of side effects and drug interactions is high. Drug-related problems represent the fifth leading cause...... of death in the United States. The public expenses to drug treatment are constantly increasing. The possibility to withdraw the medication must be taken into account but the decision to discontinue drugs is complex and poorly understood. Planned studies: 1. Patients’ views upon discontinuation...... of preventive drugs. Qualitative interviews with patients experiencing discontinuation of preventive drugs addressing: Which attitudes do the patients have towards preventive drugs? Which thoughts do the patients have in relation to discontinuation of the drugs? How do they understand their own and the GP...

  9. Beam Coupling Impedances of Small Discontinuities

    CERN Document Server

    Kurennoy, S S

    2000-01-01

    A general derivation of the beam coupling impedances produced by small discontinuities on the wall of the vacuum chamber of an accelerator is reviewed. A collection of analytical formulas for the impedances of small obstacles is presented.

  10. Discontinuous spirals of stable periodic oscillations.

    Science.gov (United States)

    Sack, Achim; Freire, Joana G; Lindberg, Erik; Pöschel, Thorsten; Gallas, Jason A C

    2013-11-27

    We report the experimental discovery of a remarkable organization of the set of self-generated periodic oscillations in the parameter space of a nonlinear electronic circuit. When control parameters are suitably tuned, the wave pattern complexity of the periodic oscillations is found to increase orderly without bound. Such complex patterns emerge forming self-similar discontinuous phases that combine in an artful way to produce large discontinuous spirals of stability. This unanticipated discrete accumulation of stability phases was detected experimentally and numerically in a Duffing-like proxy specially designed to bypass noisy spectra conspicuously present in driven oscillators. Discontinuous spirals organize the dynamics over extended parameter intervals around a focal point. They are useful to optimize locking into desired oscillatory modes and to control complex systems. The organization of oscillations into discontinuous spirals is expected to be generic for a class of nonlinear oscillators.

  11. Discontinuous Spirals of Stable Periodic Oscillations

    Science.gov (United States)

    Sack, Achim; Freire, Joana G.; Lindberg, Erik; Pöschel, Thorsten; Gallas, Jason A. C.

    2013-01-01

    We report the experimental discovery of a remarkable organization of the set of self-generated periodic oscillations in the parameter space of a nonlinear electronic circuit. When control parameters are suitably tuned, the wave pattern complexity of the periodic oscillations is found to increase orderly without bound. Such complex patterns emerge forming self-similar discontinuous phases that combine in an artful way to produce large discontinuous spirals of stability. This unanticipated discrete accumulation of stability phases was detected experimentally and numerically in a Duffing-like proxy specially designed to bypass noisy spectra conspicuously present in driven oscillators. Discontinuous spirals organize the dynamics over extended parameter intervals around a focal point. They are useful to optimize locking into desired oscillatory modes and to control complex systems. The organization of oscillations into discontinuous spirals is expected to be generic for a class of nonlinear oscillators. PMID:24284508

  12. Discontinuous Galerkin for the Radiative Transport Equation

    KAUST Repository

    Guermond, Jean-Luc

    2013-10-11

    This note presents some recent results regarding the approximation of the linear radiative transfer equation using discontinuous Galerkin methods. The locking effect occurring in the diffusion limit with the upwind numerical flux is investigated and a correction technique is proposed.

  13. Conforming finite elements with embedded strong discontinuities

    NARCIS (Netherlands)

    Dias-da-Costa, D.; Alfaiate, J.; Sluys, L.J.; Areias, P.; Fernandes, C.; Julio, E.

    2012-01-01

    The possibility of embedding strong discontinuities into finite elements allowed the simulation of different problems, namely, brickwork masonry fracture, dynamic fracture, failure in finite strain problems and simulation of reinforcement concrete members. However, despite the significant contributi

  14. Improved Edge Awareness in Discontinuity Preserving Smoothing

    CERN Document Server

    Heinrich, Stuart B

    2011-01-01

    Discontinuity preserving smoothing is a fundamentally important procedure that is useful in a wide variety of image processing contexts. It is directly useful for noise reduction, and frequently used as an intermediate step in higher level algorithms. For example, it can be particularly useful in edge detection and segmentation. Three well known algorithms for discontinuity preserving smoothing are nonlinear anisotropic diffusion, bilateral filtering, and mean shift filtering. Although slight differences make them each better suited to different tasks, all are designed to preserve discontinuities while smoothing. However, none of them satisfy this goal perfectly: they each have exception cases in which smoothing may occur across hard edges. The principal contribution of this paper is the identification of a property we call edge awareness that should be satisfied by any discontinuity preserving smoothing algorithm. This constraint can be incorporated into existing algorithms to improve quality, and usually ha...

  15. Neural networks with discontinuous/impact activations

    CERN Document Server

    Akhmet, Marat

    2014-01-01

    This book presents as its main subject new models in mathematical neuroscience. A wide range of neural networks models with discontinuities are discussed, including impulsive differential equations, differential equations with piecewise constant arguments, and models of mixed type. These models involve discontinuities, which are natural because huge velocities and short distances are usually observed in devices modeling the networks. A discussion of the models, appropriate for the proposed applications, is also provided. This book also: Explores questions related to the biological underpinning for models of neural networks\\ Considers neural networks modeling using differential equations with impulsive and piecewise constant argument discontinuities Provides all necessary mathematical basics for application to the theory of neural networks Neural Networks with Discontinuous/Impact Activations is an ideal book for researchers and professionals in the field of engineering mathematics that have an interest in app...

  16. Discontinuance of ADHD Treatment in Adolescents

    Directory of Open Access Journals (Sweden)

    J Gordon Millichap

    2009-04-01

    Full Text Available Prevalence of ADHD drug discontinuance in adolescents and young adults was studied in the UK by using the General Practice Database for patients aged 15-21 years from 1999 to 2006.

  17. Gradient Descent Bit Flipping Algorithms for Decoding LDPC Codes

    OpenAIRE

    Wadayama, Tadashi; Nakamura, Keisuke; Yagita, Masayuki; Funahashi, Yuuki; Usami, Shogo; Takumi, Ichi

    2007-01-01

    A novel class of bit-flipping (BF) algorithms for decoding low-density parity-check (LDPC) codes is presented. The proposed algorithms, which are called gradient descent bit flipping (GDBF) algorithms, can be regarded as simplified gradient descent algorithms. Based on gradient descent formulation, the proposed algorithms are naturally derived from a simple non-linear objective function.

  18. Reversal of Magnetisation in Ising Ferromagnet by the Field Having Gradient

    Science.gov (United States)

    Dhar, Abyaya; Acharyya, Muktish

    2016-11-01

    We have studied the reversal of magnetisation in Ising ferromagnet by the field having gradient along a particular direction. We employed the Monte Carlo simulation with Metropolis single spin flip algorithm. The average lifetime of the metastable state was observed to increase with the magnitude of the gradient of applied field. In the high gradient regime, the system was observed to show two distinct region of up and down spins. The interface or the domain wall was observed to move as one increases the gradient. The displacement of the mean position of the interface was observed to increase with the gradient as hyperbolic tangent function. The roughness of the interface was observed to decay exponentially as the gradient increases. The number of spin flip per site was observed to show a discontinuity in the vicinity of the domain wall. The amount of the discontinuity was found to diverge with the system size as a power law fashion with an exponent 5/3.

  19. On stochastic and discontinuous optimization methods

    Energy Technology Data Exchange (ETDEWEB)

    Ermoliev, Y.

    1994-12-31

    The talk is based on a joint article by Y. Ermoliev, V. Norkin and R. Wets. A new notion of subgradient is introduced which allows to develop easily implementable procedures of discontinuous optimization, in particular, finite-difference approximation schemes. The approach relies on the notion of differentiability in the sense of distributions converting a discontinuous optimization problem into a problem of the stochastic optimization. Applications involving risks and abrupt transitions are discussed.

  20. Variations of Hales Discontinuity beneath South India

    Science.gov (United States)

    Goyal, Ayush; Kosre, Goukaran Kumar; Borah, Kajaljyoti

    2016-04-01

    Thermodynamic studies show the spinel-garnet transition in fertile and hot mantle should be relatively narrow and should show up in the seismological studies as a discontinuity. The evidence for a shallow lithospheric mantle discontinuity was first proposed by Hales (1969) based on seismological travel time measurement from the Early Rise experiment in the Central United States, where a ~4% increase in the S-wave velocity at a depth of 75 km was observed. The recent studies show, in cratonic blocks with colder geotherms, that it appears at greater depths and over broader intervals, that is, from the Moho to 150 km depth. Different studies interpreted that Hales discontinuity may be due to seismic anisotropy or pervasive partial melts or cation ordering in mantle olivine. In the present study an attempt is made to model the Hales discontinuity in the South Indian shield, by jointly inverting group velocity dispersion and receiver functions, calculated from teleseismic earthquakes recorded at 20 broadband seismograph locations in the study region. South Indian shield is an amalgamation of several crustal blocks, namely, Eastern Dharwar Craton (EDC), Western Dharwar Craton (WDC), Southern Granulite Terrain (SGT) etc. Inversion modeling results show deeper Hales discontinuity (~104-110 km depth) in the south of WDC and SGT, while in the north of Western Dharwar Craton and Eastern Dharwar Craton it varies from ~70-80 km. It is also observed that the Hales Discontinuity is present at greater depth in the western part of Dharwar Craton, compared to the eastern part. Details of the depth, thickness, and the cause of the Hales discontinuity are also investigated. Keywords: Hales Discontinuity, South Indian Shield, Receiver Function, Craton, Inversion modeling.

  1. Discontinuities of multi-Regge amplitudes

    CERN Document Server

    Fadin, V S

    2014-01-01

    In the BFKL approach, discontinuities of multiple production amplitudes in invariant masses of produced particles are discussed. It turns out that they are in evident contradiction with the BDS ansatz for $n$-gluon amplitudes in the planar $N$=4 SYM at $n\\ge 6$. An explicit expression for the NLO discontinuity of the two-to-four amplitude in the invariant mass of two produced gluons is is presented.

  2. Effect of discontinuities in Kohn-Sham-based chemical reactivity theory

    CERN Document Server

    Hellgren, M

    2012-01-01

    We provide a new derivation of a formula for the Fukui function of density-functional chemical reactivity theory which incorporates the discontinuities in the Kohn-Sham reference system. Orbital relaxations are described in terms of the exchange-correlation (XC) kernel, i.e., the derivative of the XC potential with respect to the density and it is shown that in order to correctly measure the reactivity toward a nucleophilic reagent a discontinuity of the XC kernel has to be taken into account. The importance of this finding is illustrated in model molecular systems.

  3. SEPARATION OF X-BEARING BOVINE SPERM BY CENTRIFUGATION IN CONTINUOUS PERCOLL AND OPTIPREP DENSITY GRADIENT: EFFECT IN SPERM VIABILITY AND IN VITRO EMBRYO PRODUCTION SEPARAÇÃO DE ESPERMATOZOIDES PORTADORES DO CROMOSSOMO X BOVINO POR CENTRIFUGAÇÃO EM GRADIENTE DE DENSIDADE CONTÍNUO DE PERCOLL E OPTIPREP: EFEITO SOBRE A VIABILIDADE ESPERMÁTICA E NA PRODUÇÃO IN VITRO DE EMBRIÕES

    Directory of Open Access Journals (Sweden)

    Aline Costa Lucio

    2009-07-01

    Full Text Available

    The aim of this study was to separate X-bearing bovine sperm by continuous Percoll and OptiPrep density gradients and to validate the sexing of resultant in vitro produced embryos by Polimerase Chain Reaction (PCR. Frozen/thawed sperm was layered on density gradients which were previously prepared in polystyrene tubes, 24 h before procedures and maintained at 4 °C. The tubes were centrifuged at 500 x g for 15 min at 22 °C. Supernatants were gently aspirated and the sperm recovered from the bottom of the tubes. Viability and integrity of sperm were evaluated by Trypan Blue/Giemsa stain. Cleavage and blastocyst rates were determined by in vitro production of embryos and PCR was performed for identification of the embryos’ genetic sex. No damage in viability and acrossomal integrity and in cleavage and blastocyst rates was found in the Percoll and OptiPrep treatment compared to the non-centrifuged group (P>0.05. The percentage of female embryos in the Percoll and OptiPrep group was 63.0 and 47.6%, respectively. The female embryos in control group were 48.7%. A sexual deviation in the Percoll density gradient was achieved without reduction of sperm viability and in vitro production rates.

    KEY WORDS: Bovine, centrifugation, in vitro production of embryos, PCR, X-bearing sperm.

    O objetivo deste estudo foi separar espermatozoides bovinos portadores do cromossomo X pela centrifugação em gradiente de densidade contínuo de Percoll e OptiPrep, e validar a sexagem pela reação em cadeia da polimerase (PCR, dos embriões produzidos in vitro. Para a sexagem, espermatozoides descongelados foram depositados nos gradientes de densidade, previamente preparados, em tubos de poliestireno, 24 horas antes da sexagem e mantidos a 4°C. Centrifugou-se a 500 x g por quinze minutos a 22°C. Os sobrenadantes foram aspirados, e os espermatozoides recuperados do

  4. Discontinuous Galerkin Method for Hyperbolic Conservation Laws

    KAUST Repository

    Mousikou, Ioanna

    2016-11-11

    Hyperbolic conservation laws form a special class of partial differential equations. They describe phenomena that involve conserved quantities and their solutions show discontinuities which reflect the formation of shock waves. We consider one-dimensional systems of hyperbolic conservation laws and produce approximations using finite difference, finite volume and finite element methods. Due to stability issues of classical finite element methods for hyperbolic conservation laws, we study the discontinuous Galerkin method, which was recently introduced. The method involves completely discontinuous basis functions across each element and it can be considered as a combination of finite volume and finite element methods. We illustrate the implementation of discontinuous Galerkin method using Legendre polynomials, in case of scalar equations and in case of quasi-linear systems, and we review important theoretical results about stability and convergence of the method. The applications of finite volume and discontinuous Galerkin methods to linear and non-linear scalar equations, as well as to the system of elastodynamics, are exhibited.

  5. Discontinuation Decision in Assisted Reproductive Techniques

    Directory of Open Access Journals (Sweden)

    Ashraf Moini

    2009-01-01

    Full Text Available Background: In vitro fertilization (IVF and intra cytoplasmic sperm injection (ICSI are recognizedas established and increasingly successful forms of treatment for infertility, yet significant numbersof couples discontinue treatment without achieving a live birth. This study aims to identify majorfactors that influence the decision to discontinue IVF/ICSI treatments.Materials and Methods: We studied the data of 338 couples who discontinued their infertilitytreatments after three cycles; based on medical records and phone contact. The main measure wasthe reason for stopping their treatments.Results: Economical problems were cited by 212 couples (62.7%, as their mean income wassignificantly less than other couples (p<0.0001. Lack of success was reported as a reason by229 (67.8%, from whom 165 (72% also had economical problems. Achieving independent-ART pregnancy was the reason for discontinuation in 20 (5.9% couples. Psychological stress,depression and anxiety were reported as other cessation factors by 169 (50%, 148 (43.8% and 182(53.8% couples, respectively.Conclusion: This survey suggests that the most common reasons for assisted reproductivetechnique (ART discontinuation after three cycles are: prior unsuccessful cycles, economicaland psychological problems. Therefore, the substantial proportion of couples could benefit frompsychological intervention, increasing awareness of ART outcomes and health funding to copemore adequately with failed treatments.

  6. 27 CFR 555.128 - Discontinuance of business.

    Science.gov (United States)

    2010-04-01

    ... 27 Alcohol, Tobacco Products and Firearms 3 2010-04-01 2010-04-01 false Discontinuance of business... Discontinuance of business. Where an explosive materials business or operations is discontinued and succeeded by... such facts and shall be delivered to the successor. Where discontinuance of the business or operations...

  7. 27 CFR 478.127 - Discontinuance of business.

    Science.gov (United States)

    2010-04-01

    ... 27 Alcohol, Tobacco Products and Firearms 3 2010-04-01 2010-04-01 false Discontinuance of business... Records § 478.127 Discontinuance of business. Where a licensed business is discontinued and succeeded by a... be delivered to the successor. Where discontinuance of the business is absolute, the records shall be...

  8. 27 CFR 478.57 - Discontinuance of business.

    Science.gov (United States)

    2010-04-01

    ... 27 Alcohol, Tobacco Products and Firearms 3 2010-04-01 2010-04-01 false Discontinuance of business... Licenses § 478.57 Discontinuance of business. (a) Where a firearm or ammunition business is either discontinued or succeeded by a new owner, the owner of the business discontinued or succeeded shall within 30...

  9. PLASTIC LIMIT ANALYSIS OF DISCONTINUOUS LINING UNDERGROUND PRESSURE

    Institute of Scientific and Technical Information of China (English)

    龙春安

    1999-01-01

    Discontinuous lining is a special form of support in underground excavation. Based on the method of plastic limit analysis, it is found the upper and the lower bound solution of the pressure of circular discontinuous lining and discussed support parameter of discontinuous lining and its applicable conditions, which provides theoretical basis for the design and calculation of discontinuous lining.

  10. The gradient flow in a twisted box

    Energy Technology Data Exchange (ETDEWEB)

    Ramos, Alberto [Deutsches Elektronen-Synchrotron (DESY), Zeuthen (Germany). John von Neumann-Inst. fuer Computing NIC

    2013-08-15

    We study the perturbative behavior of the gradient flow in a twisted box. We apply this information to define a running coupling using the energy density of the flow field. We study the step-scaling function and the size of cutoff effects in SU(2) pure gauge theory. We conclude that the twisted gradient flow running coupling scheme is a valid strategy for step-scaling purposes due to the relatively mild cutoff effects and high precision.

  11. Method for simulating discontinuous physical systems

    Science.gov (United States)

    Baty, Roy S.; Vaughn, Mark R.

    2001-01-01

    The mathematical foundations of conventional numerical simulation of physical systems provide no consistent description of the behavior of such systems when subjected to discontinuous physical influences. As a result, the numerical simulation of such problems requires ad hoc encoding of specific experimental results in order to address the behavior of such discontinuous physical systems. In the present invention, these foundations are replaced by a new combination of generalized function theory and nonstandard analysis. The result is a class of new approaches to the numerical simulation of physical systems which allows the accurate and well-behaved simulation of discontinuous and other difficult physical systems, as well as simpler physical systems. Applications of this new class of numerical simulation techniques to process control, robotics, and apparatus design are outlined.

  12. Discontinuous Spirals of Stable Periodic Oscillations

    DEFF Research Database (Denmark)

    Sack, Achim; Freire, Joana G.; Lindberg, Erik

    2013-01-01

    We report the experimental discovery of a remarkable organization of the set of self-generated periodic oscillations in the parameter space of a nonlinear electronic circuit. When control parameters are suitably tuned, the wave pattern complexity of the periodic oscillations is found to increase...... orderly without bound. Such complex patterns emerge forming self-similar discontinuous phases that combine in an artful way to produce large discontinuous spirals of stability. This unanticipated discrete accumulation of stability phases was detected experimentally and numerically in a Duffing-like proxy...... specially designed to bypass noisy spectra conspicuously present in driven oscillators. Discontinuous spirals organize the dynamics over extended parameter intervals around a focal point. They are useful to optimize locking into desired oscillatory modes and to control complex systems. The organization...

  13. Identification of discontinuities in plasma plume evolution

    CERN Document Server

    Gojani, Ardian B; Obayashi, Shigeru

    2013-01-01

    The ejection of material during laser ablation gives rise to the development of discontinuities in the ambient gas. Several of these discontinuities are observed and characterized, including externally and internally propagating shock waves, contact surface, and the ionization front. Qualitative experimental observations and analysis of these discontinuities is presented. Results from shadowgraphy enabled determination of an irradiance threshold between two different ablation mechanisms, and determination of several stages of plasma plume evolution. Consideration of the refractive index as a dynamic sum of the contributions from gas and electrons led to separate identification of ionization front from the contact surface. Furthermore, ionization front was observed to lead the shock wave at the earlier stage of the ablation.

  14. Rockburst Generation in Discontinuous Rock Masses

    Science.gov (United States)

    He, Ben-Guo; Zelig, Ravit; Hatzor, Yossef H.; Feng, Xia-Ting

    2016-10-01

    We study rockburst generation in discontinuous rock masses using theoretical and numerical approaches. We begin by developing an analytical solution for the energy change due to tunneling in a continuous rock mass using linear elasticity. We show that the affected zone where most of the increase in elastic strain energy takes place is restricted to an annulus that extends to a distance of three diameters from the tunnel center, regardless of initial tunnel diameter, magnitude of in situ stress, and in situ stress ratio. By considering local elastic strain concentrations, we further delineate the Rockbursting Prone Zone found to be concentrated in an annulus that extends to one diameter from the tunnel center, regardless of original stress ratio, magnitude, and the stiffness of the rock mass. We proceed by arguing that in initially discontinuous rock masses shear stress amplification due to tunneling will inevitably trigger block displacements along preexisting discontinuities much before shear failure of intact rock elements will ensue, because of the lower shear strength of discontinuities with respect to intact rock elements, provided of course that the blocks are removable. We employ the numerical discrete element DDA method to obtain, quantitatively, the kinetic energy, the elastic strain energy, and the dissipated energy in the affected zone in a discontinuous rock due to tunneling. We show that the kinetic energy of ejected blocks due to strain relaxation increases with increasing initial stress and with decreasing frictional resistance of preexisting discontinuities. Finally, we demonstrate how controlled strain energy release by means of top heading and bench excavation methodology can assist in mitigating rockburst hazards due to stain relaxation.

  15. Current discontinuities on superconducting cosmic strings

    Energy Technology Data Exchange (ETDEWEB)

    Troyan, E., E-mail: et@iaaru.astronautiko.org; Vlasov, Yu. V. [Moscow Institute of Physics and Technology (Russian Federation)

    2011-07-15

    The propagation of current perturbations on superconducting cosmic strings is considered. The conditions for the existence of discontinuities similar to shock waves have been found. The formulas relating the string parameters and the discontinuity propagation speed are derived. The current growth law in a shock wave is deduced. The propagation speeds of shock waves with arbitrary amplitudes are calculated. The reason why there are no shock waves in the case of time-like currents (in the 'electric' regime) is explained; this is attributable to the shock wave instability with respect to perturbations of the string world sheet.

  16. Discontinuity-preserving optical flow algorithm

    Institute of Scientific and Technical Information of China (English)

    Yuan Lei; Li Jinzong; Li Dongdong

    2007-01-01

    A modification of Horn and Schunk's approach is investigated, which leads to a better preservation of flow discontinuities.It improves Horn-Schunk model in three aspects: (1) It replaces the smooth weight coefficient in the energy equation by the variable weight coefficient.(2) It adopts a novel method to compute the mean velocity.The novel method also reflects the effect of the intensity difference on the image velocity diffusion.(3) It introduces a more efficient iterative method than the Gauss-Seidel method to solve the associated Euler-Lagrange equation.The experiment results validate the better effect of the improved method on preserving discontinuities.

  17. Discontinuity effects on radial cavity transmission lines

    Energy Technology Data Exchange (ETDEWEB)

    Seidel, D.B.

    1979-04-01

    Pulse propagation in radial cavity transmission lines such as those found on a radial line accelerator is considered. Specifically, the effects of discontinuities along the line are examined in detail. It is found that previous analyses of such effects have been incorrect, and here two alternate solution techniques are presented. Depending upon the parameters of such a radial line, the discontinuity effects considered here may or may not be significant; however, if they are significant, it is recommended that the alternate solution techniques presented here be used.

  18. Electric field gradients in Hg compounds

    DEFF Research Database (Denmark)

    Arcisauskaité, Vaida; Knecht, Stefan; Sauer, Stephan P. A.

    2012-01-01

    We examine the performance of Density Functional Theory (DFT) approaches based on the Zeroth-Order Regular Approximation (ZORA) Hamiltonian (with and without inclusion of spinorbit coupling) for predictions of electric ¿eld gradients (EFGs) at the heavy atom Hg nucleus. This is achieved by compar......We examine the performance of Density Functional Theory (DFT) approaches based on the Zeroth-Order Regular Approximation (ZORA) Hamiltonian (with and without inclusion of spinorbit coupling) for predictions of electric ¿eld gradients (EFGs) at the heavy atom Hg nucleus. This is achieved...

  19. 77 FR 26185 - POSTNET Barcode Discontinuation

    Science.gov (United States)

    2012-05-03

    ... From the Federal Register Online via the Government Publishing Office ] POSTAL SERVICE 39 CFR Part 111 POSTNET Barcode Discontinuation AGENCY: Postal Service TM . ACTION: Final rule. SUMMARY: The... March 2, 2012, the Postal Service published a proposed rule in the Federal Register (77 FR 12764-12769...

  20. Problems with Discontinuous Diffusion/Dispersion Coefficients

    Directory of Open Access Journals (Sweden)

    Stefano Ferraris

    2012-01-01

    accurate on smooth solutions and based on a special numerical treatment of the diffusion/dispersion coefficients that makes its application possible also when such coefficients are discontinuous. Numerical experiments confirm the convergence of the numerical approximation and show a good behavior on a set of benchmark problems in two space dimensions.

  1. General practitioners’ decisions about discontinuation of medication

    DEFF Research Database (Denmark)

    Nixon, Michael Simon; Vendelø, Morten Thanning

    2016-01-01

    Purpose – The purpose of this paper is to investigate how general practitioners’ (GPs) decisions about discontinuation of medication are influenced by their institutional context. Design/methodology/approach – In total, 24 GPs were interviewed, three practices were observed and documents were col...

  2. Continuous-Discontinuous Modelling of Failure

    NARCIS (Netherlands)

    Simone, A.

    2003-01-01

    The foundations of a safe structural design lie on the understanding of failure processes of engineering materials and in their correct representation. In a numerical context, failure representation in engineering materials can be pursued either in a continuous or in a discontinuous setting. Both ap

  3. ELECTRIC FIELD MEASUREMENT IN ROD-DISCONTINUED ...

    African Journals Online (AJOL)

    2014-06-30

    Jun 30, 2014 ... The used arrangement with homogeneous system is made up of a square metallic sheet ... This distance is considered positive when the rod is located ... in the case of the discontinuous earth which were defined according to ...

  4. An equilibrium closure result for discontinuous games

    NARCIS (Netherlands)

    Balder, E.J.

    2011-01-01

    For games with discontinuous payoffs Simon and Zame (1990) introduced payoff indeterminacy, in the form of endogenous sharing rules, which are measurable selections of a certain payoff correspondence. Their main result concerns the existence of a mixed Nash equilibrium and an associated sharing

  5. Olanzapine discontinuation emergent recurrence in bipolar disorder

    Directory of Open Access Journals (Sweden)

    Manu Arora

    2014-01-01

    Full Text Available Objective: The efficacy of atypical antipsychotics including olanzapine in acute treatment of manic episode has been established, whereas its role in maintenance treatment is not clear. Materials and Methods: Thirteen patients of bipolar disorder who were on regular treatment with mood stabilizer and subsequently relapsed into mania or depressive episode after discontinuation of olanzapine were studied for various socio-demographic and clinical factors using retrospective chart review. Results: There was no correlation found between the period of tapering olanzapine, time to recurrence of episode after discontinuation, and the dosage of olanzapine at the time of discontinuation. The predominant early signs of relapse after discontinuation of olanzapine included sleep disturbance (72.7%, lack of insight for change in behavior (72.7%, irritability (54.5%, and elevated mood (45.5%. Conclusion: Mood stabilizer alone as a maintenance therapy of bipolar disorder may be inadequate for long-term management. A low dose of olanzapine along with mood stabilizers might be useful for prevention of recurrence in bipolar disorder.

  6. Discontinued drugs in 2008: endocrine and metabolic.

    Science.gov (United States)

    Colca, Jerry R

    2009-09-01

    This perspective summarizes key compounds from the endocrine and metabolic area that were discontinued during the calendar year 2008. This is a continuation in a series of perspectives of each of the editorial areas summarized by Expert Opinion on Investigational Drugs. The candidates covered in this summary were being developed for the treatment of diabetes, diabetic complications, anti-atherosclerosis and obesity.

  7. Unstructured discontinuous Galerkin for seismic inversion.

    Energy Technology Data Exchange (ETDEWEB)

    van Bloemen Waanders, Bart Gustaaf; Ober, Curtis Curry; Collis, Samuel Scott

    2010-04-01

    This abstract explores the potential advantages of discontinuous Galerkin (DG) methods for the time-domain inversion of media parameters within the earth's interior. In particular, DG methods enable local polynomial refinement to better capture localized geological features within an area of interest while also allowing the use of unstructured meshes that can accurately capture discontinuous material interfaces. This abstract describes our initial findings when using DG methods combined with Runge-Kutta time integration and adjoint-based optimization algorithms for full-waveform inversion. Our initial results suggest that DG methods allow great flexibility in matching the media characteristics (faults, ocean bottom and salt structures) while also providing higher fidelity representations in target regions. Time-domain inversion using discontinuous Galerkin on unstructured meshes and with local polynomial refinement is shown to better capture localized geological features and accurately capture discontinuous-material interfaces. These approaches provide the ability to surgically refine representations in order to improve predicted models for specific geological features. Our future work will entail automated extensions to directly incorporate local refinement and adaptive unstructured meshes within the inversion process.

  8. In-process discontinuity detection during friction stir welding

    Science.gov (United States)

    Shrivastava, Amber

    The objective of this work is to develop a method for detecting the creation of discontinuities (e.g., voids) during friction stir welding. Friction stir welding is inherently cost-effective, however, the need for significant weld inspection can make the process cost-prohibitive. A new approach to weld inspection is required -- where an in-situ characterization of weld quality can be obtained, reducing the need for post-process inspection. Friction stir welds with discontinuity and without discontinuity were created. In this work, discontinuities are generated by reducing the friction stir tool rotation frequency and increasing the tool traverse speed in order to create "colder" welds. During the welds, forces are measured. Discontinuity sizes for welds are measured by computerized tomography. The relationship between the force transients and the discontinuity sizes indicate that the force measurement during friction stir welding can be effectively used for detecting discontinuities in friction stir welds. The normalized force transient data and normalized discontinuity size are correlated to develop a criterion for discontinuity detection. Additional welds are performed to validate the discontinuity detection method. The discontinuity sizes estimated by the force measurement based method are in good agreement with the discontinuity sizes measured by computerized tomography. These results show that the force measurement based discontinuity detection model method can be effectively used to detect discontinuities during friction stir welding.

  9. Gradients are shaping up.

    Science.gov (United States)

    Bollenbach, Tobias; Heisenberg, Carl-Philipp

    2015-04-23

    In animal embryos, morphogen gradients determine tissue patterning and morphogenesis. Shyer et al. provide evidence that, during vertebrate gut formation, tissue folding generates graded activity of signals required for subsequent steps of gut growth and differentiation, thereby revealing an intriguing link between tissue morphogenesis and morphogen gradient formation.

  10. Fast Distributed Gradient Methods

    CERN Document Server

    Jakovetic, Dusan; Moura, Jose M F

    2011-01-01

    The paper proposes new fast distributed optimization gradient methods and proves convergence to the exact solution at rate O(\\log k/k), much faster than existing distributed optimization (sub)gradient methods with convergence O(1/\\sqrt{k}), while incurring practically no additional communication nor computation cost overhead per iteration. We achieve this for convex (with at least one strongly convex,) coercive, three times differentiable and with Lipschitz continuous first derivative (private) cost functions. Our work recovers for distributed optimization similar convergence rate gains obtained by centralized Nesterov gradient and fast iterative shrinkage-thresholding algorithm (FISTA) methods over ordinary centralized gradient methods. We also present a constant step size distributed fast gradient algorithm for composite non-differentiable costs. A simulation illustrates the effectiveness of our distributed methods.

  11. Shock front field structure in low-density systems

    Science.gov (United States)

    Hua, Rui; Mucguffey, Christopher; Beg, Farhat; Sio, Hong; Ping, Yuan; Wilks, Scott; Heeter, Bob; Collins, Rip

    2016-10-01

    It is known that a shock front is not a simple discontinuity in density and temperature as depicted in commonly used hydro codes but also consists of self-generated fields associated with gradients in the electron pressure. A quasi-planar platform using broadband proton radiography has been developed to study this field structure at a shock front. The broad bandwidth offers energy-dependent measurements which quantitatively constrain both the potential and field width at the shock front. Experiments were conducted on the OMEGA EP, where three long pulse beams delivered 6 kJ in 2 ns for shock initiation in a tube filled with either pure Helium or mixture of Helium and Neon, and a short pulse of 850 J, 10 ps generated broadband protons for point-projection radiography. Simultaneous spatially resolved soft-x-ray spectroscopy provided shock velocity, particle velocity and thermal emission measurements, constraining density and temperature for the field generation. The data and modeling indicate that a multi-KeV potential was present at the shock front where a strong electron pressure gradient existed. This work was performed under DOE contract DE-AC52-07NA27344 with support from OFES Early Career program and LLNL LDRD program.

  12. Spacetime Meshing for Discontinuous Galerkin Methods

    CERN Document Server

    Thite, Shripad Vidyadhar

    2008-01-01

    Spacetime discontinuous Galerkin (SDG) finite element methods are used to solve such PDEs involving space and time variables arising from wave propagation phenomena in important applications in science and engineering. To support an accurate and efficient solution procedure using SDG methods and to exploit the flexibility of these methods, we give a meshing algorithm to construct an unstructured simplicial spacetime mesh over an arbitrary simplicial space domain. Our algorithm is the first spacetime meshing algorithm suitable for efficient solution of nonlinear phenomena in anisotropic media using novel discontinuous Galerkin finite element methods for implicit solutions directly in spacetime. Given a triangulated d-dimensional Euclidean space domain M (a simplicial complex) and initial conditions of the underlying hyperbolic spacetime PDE, we construct an unstructured simplicial mesh of the (d+1)-dimensional spacetime domain M x [0,infinity). Our algorithm uses a near-optimal number of spacetime elements, ea...

  13. Archetypal oscillator for smooth and discontinuous dynamics.

    Science.gov (United States)

    Cao, Qingjie; Wiercigroch, Marian; Pavlovskaia, Ekaterina E; Grebogi, Celso; Thompson, J Michael T

    2006-10-01

    We propose an archetypal system to investigate transitions from smooth to discontinuous dynamics. In the smooth regime, the system bears significant similarities to the Duffing oscillator, exhibiting the standard dynamics governed by the hyperbolic structure associated with the stationary state of the double well. At the discontinuous limit, however, there is a substantial departure in the dynamics from the standard one. In particular, the velocity flow suffers a jump in crossing from one well to another, caused by the loss of local hyperbolicity due to the collapse of the stable and unstable manifolds of the stationary state. In the presence of damping and external excitation, the system has coexisting attractors and also a chaotic saddle which becomes a chaotic attractor when a smoothness parameter drops to zero. This attractor can bifurcate to a high-period periodic attractor or a chaotic sea with islands of quasiperiodic attractors depending on the strength of damping.

  14. High-temperature discontinuously reinforced aluminum

    Science.gov (United States)

    Zedalis, M. S.; Bryant, J. D.; Gilman, P. S.; Das, S. K.

    1991-08-01

    High-temperature discontinuously reinforced aluminum (HTDRA) composites have been developed for elevated-temperature applications by incorporating SiC particulate reinforcement into a rapidly solidified, high-temperature Al-Fe-V-Si (alloy 8009) matrix. HTDRA combines the superior elevated-temperature strength, stability and corrosion resistance of the 8009 matrix with the excellent specific stiffness and abrasion resistance of the discontinuous SiC particulate reinforcement. On a specific stiffness basis, HTDRA is competitive with Ti-6-Al-4V and 17-4 PH stainless steel to temperatures approaching 480°C. Potential aerospace applications being considered for HTDRA include aircraft wing skins, missile bodies, and miscellaneous engine, spacecraft and hypersonic vehicle components.

  15. Discontinued drugs 2011: endocrine and metabolic.

    Science.gov (United States)

    Colca, Jerry R

    2012-11-01

    This perspective summarizes key compounds from the endocrine and metabolic area that were discontinued during the calendar year 2011. Metabolic diseases continue to comprise some of the most important, but underserved areas of medical management. The candidates covered in this summary were primarily being developed for treatment of type 2 and type 1 diabetes, obesity and inflammatory gastrointestinal disease. Candidates were identified from a search by informahealthcare including data available on TreasureTrove. Discontinuation of programs during this period include older and newer projects but apparently all suffer from inability to provide timely evidence of clear benefit in clinical trials in the face of growing costs of development. There is a key need for targets that when modulated clearly affect the pathophysiology of the disease in way that is evident early in clinical trials.

  16. Discontinuous Operation of Geothermal Heat Exchangers

    Institute of Scientific and Technical Information of China (English)

    方肇洪; 刁乃仁; 崔萍

    2002-01-01

    Ground-source heat pump (GSHP) systems for HVAC have aroused more and more interest in China in recent years because of their higher energy efficiency compared with conventional systems. The design and performance simulation of the geothermal heat exchangers is vital to the success of this technology. In GSHP systems, the load of the geothermal heat exchanger varies greatly and is usually discontinuous even during a heating or cooling season. This paper outlines a heat transfer model for geothermal heat exchangers. The model was used to study the influence of the discontinuous operation of the heat pumps on the performance of the geothermal heat exchangers. A simple and practical approach is presented for sizing the geothermal heat exchangers.

  17. Mantle discontinuities beneath Izu-Bonin and the implications

    Institute of Scientific and Technical Information of China (English)

    臧绍先; 周元泽; 蒋志勇

    2003-01-01

    The SdP, pdP and sdP phases are picked up with the Nth root slant stack method from the digital waveform data recorded by the networks and arrays in USA, Germany and Switzerland for the earthquakes occurring beneath Izu-Bonin and Japan Sea. The mantle discontinuities and the effects of subducting slab on the 660 km and 410 km discontinuities are studied. It is found that there are mantle discontinuities existing at the depths of 170, 220, 300, 410, 660, 850 and 1150 km. Beneath Izu-Bonin, the 410 km discontinuity is elevated, while the 660 km discontinuity is depressed; for both discontinuities, there are regionalized differences. Beneath Japan Sea, however, there is no depth variation of the 410 km discontinuity, and the 660 km discontinuity is depressed without obvious effect of the subducting slab.

  18. 33 CFR 66.01-25 - Discontinuance and removal.

    Science.gov (United States)

    2010-07-01

    ... Discontinuance and removal. (a) No person, public body or instrumentality shall change, move or discontinue any... body or instrumentality establishing or maintaining such aids when so directed by the...

  19. Diffractional Imaging of Mantle Transition Zone Discontinuities Using SdS-SS Traveltimes

    Science.gov (United States)

    Guo, Z.; Zhou, Y.

    2015-12-01

    The mantle transition zone is characterized by two discontinuities at depths of about 410 and 660 km. Mineral physics studies suggest that wavespeed and density jumps across the discontinuities are associated with olivine phase transformations and the depths at which the phase transformations occur are strongly dependent on temperature. Imaging lateral variations of the discontinuity depths is important for constraining thermal structure in the mid mantle. SS precursors (SdS) are waves reflected at the underside of the discontinuities and arrive beforethe SS phase. Their traveltime measurements at teleseismic distances can be used to map the discontinuities at a global scale. In this study, we measure frequency-dependent SS precursors traveltimes using seismograms recorded at GSN stations for earthquakes occurred between 2000 and 2015. The measurements were made using cosine tapers and multitapers and the traveltimes show significant dispersion. We calculate finite-frequency sensitivity kernels for SdS-SS differential measurements based on traveling-wave mode summation, which account for complete wave interactions within the measurement window. We will discuss preliminary results from finite-frequency imaging using SdS-SS dispersion measurements and the effects of 3-D crustal structure and mantle wavespeed structure.

  20. Numerical sensitivity computation for discontinuous gradient-only optimization problems using the complex-step method

    CSIR Research Space (South Africa)

    Wilke, DN

    2012-07-01

    Full Text Available , and is based on a Taylor series expansion using a pure imaginary step. The complex-step method is not subject to subtraction errors as with finite difference approaches when computing first order sensitivities and therefore allows for much smaller step sizes...

  1. Fire Regime along Latitudinal Gradients of Continuous to Discontinuous Coniferous Boreal Forests in Eastern Canada

    National Research Council Canada - National Science Library

    Portier, Jeanne; Gauthier, Sylvie; Leduc, Alain; Arseneault, Dominique; Bergeron, Yves

    2016-01-01

      Fire is the main disturbance in North American coniferous boreal forests. In Northern Quebec, Canada, where forest management is not allowed, the landscape is gradually constituted of more opened lichen woodlands...

  2. SENSITIVITY OF DARCY'S LAW TO DISCONTINUITIES

    Institute of Scientific and Technical Information of China (English)

    2003-01-01

    The authors investigate the sensitivity of hydrostatic pressure of flows through porous mediawith respect to the position of the soil layers. Indeed, these induce discontinuities of the porositypressure u and it leads to the computation of the derivative of u with respect to changes inThe analysis relies on a mixed formulation of the problem. Preliminary numerical simu-lations are given to illustrate the theory. An application to a simple inverse problem is also given.

  3. Modeling Storm Surges Using Discontinuous Galerkin Methods

    Science.gov (United States)

    2016-06-01

    discontinuous Galerkin solutions of the compressible Euler equations with applications to atmospheric simulations,” Journal of Computational Physics, vol...order continuous Galerkin methods were used for the SWE on a sphere [9]. In 2002, Giraldo et al. [10] introduced an efficient DG method for the SWE... hard time transitioning from changing bathymetry slopes causing distortions in the model to include extra line segments. The discrepancies caused us to

  4. Metabolic effects of discontinuing growth hormone treatment

    OpenAIRE

    Cowan, F; Evans, W.; Gregory, J

    1999-01-01

    AIMS—To evaluate the effects of discontinuing growth hormone (GH) treatment on energy expenditure and body composition, which might help predict those most likely to benefit from early reintroduction of GH treatment in young adult life.
METHODS—Body composition was calculated from skinfold thicknesses and dual energy x ray absorptometry (DXA). Resting metabolic rate (RMR) and whole body bone mineral content (BMC) were also measured. Measurements were made before stoppi...

  5. Discontinuities, Feynman parameters and d-lines

    CERN Document Server

    Halliday, I G

    1977-01-01

    The calculation of asymptotic limits of Feynman diagrams using Feynman parameter techniques has developed a powerful and useful technology. A major gap in this armory has concerned the calculation of specific discontinuities of Feynman diagrams. The author remedies this gap and illustrates the new technique on a series of familiar situations. These include in the Regge limit, the ladder and the AFS diagrams, and the x approximately 1 deep inelastic electroproduction region. (4 refs).

  6. Discontinuous precipitation in copper base alloys

    Indian Academy of Sciences (India)

    K T Kashyap

    2009-08-01

    Discontinuous precipitation (DP) is associated with grain boundary migration in the wake of which alternate plates of the precipitate and the depleted matrix form. Some copper base alloys show DP while others do not. In this paper the misfit strain parameter, , has been calculated and predicted that if 100 > ± 0.1, DP is observed. This criterion points to diffusional coherency strain theory to be the operative mechanism for DP.

  7. Color-Stripe Structured Light Robust to Surface Color and Discontinuity

    CERN Document Server

    Lee, Kwang Hee; Lee, Sang Wook

    2015-01-01

    Multiple color stripes have been employed for structured light-based rapid range imaging to increase the number of uniquely identifiable stripes. The use of multiple color stripes poses two problems: (1) object surface color may disturb the stripe color and (2) the number of adjacent stripes required for identifying a stripe may not be maintained near surface discontinuities such as occluding boundaries. In this paper, we present methods to alleviate those problems. Log-gradient filters are employed to reduce the influence of object colors, and color stripes in two and three directions are used to increase the chance of identifying correct stripes near surface discontinuities. Experimental results demonstrate the effectiveness of our methods.

  8. Field Discontinuities and the Memory Effect

    Science.gov (United States)

    Tolish, Alexander; Wald, Robert

    2017-01-01

    The ``memory effect,'' a permanent change in the separation of test particles after the passage of a pulse of gravitational radiation, is a well-defined and fairly well-understood phenomenon in spacetimes with a notion of null infinity. However, many valid questions remain unanswered. For example, how do we define memory in the absence of null infinity? Or, does memory depend on the precise details of the radiation source or just on the source's asymptotic behavior? We believe that such questions are best answered using a simplified, distributional model of memory. If we consider linearized gravity on fixed background spacetimes, we can study the scattering of point particles, which radiate metric perturbations with sharp, step-function wave fronts. These steps correspond to derivative-of-delta-function discontinuities in the curvature, and according to the geodesic deviation equation, it is these discontinuities (and these alone) that contribute to permanent, finite changes in test particle separation-i.e., memory. Using this analysis of field discontinuities (as well as scalar and electromagnetic analogues of gravitational memory) we can isolate the physics of the memory effect from other, background phenomena.

  9. Vintage growth and population density: an empirical investigation.

    Science.gov (United States)

    Mcmillen, D P

    1994-11-01

    "This paper tests a central prediction of vintage growth models of urban structure: that there are discontinuities in the population density function. The data set covers quarter sections in Chicago in 1980. Using such highly disaggregated data is critical because discontinuities are less likely to be found the larger is the unit of observation. Both a switching regression model and a nonparametric estimator reveal discontinuities and upward-sloping segments in the function, which supports the vintage growth model."

  10. Laser textured surface gradients

    Science.gov (United States)

    Ta, Van Duong; Dunn, Andrew; Wasley, Thomas J.; Li, Ji; Kay, Robert W.; Stringer, Jonathan; Smith, Patrick J.; Esenturk, Emre; Connaughton, Colm; Shephard, Jonathan D.

    2016-05-01

    This work demonstrates a novel technique for fabricating surfaces with roughness and wettability gradients and their subsequent applications for chemical sensors. Surface roughness gradients on brass sheets are obtained directly by nanosecond laser texturing. When these structured surfaces are exposed to air, their wettability decreases with time (up to 20 days) achieving both spatial and temporal wettability gradients. The surfaces are responsive to organic solvents. Contact angles of a series of dilute isopropanol solutions decay exponentially with concentration. In particular, a fall of 132° in contact angle is observed on a surface gradient, one order of magnitude higher than the 14° observed for the unprocessed surface, when the isopropanol concentration increased from 0 to 15.6 wt%. As the wettability changes gradually over the surface, contact angle also changes correspondingly. This effect offers multi-sensitivity at different zones on the surface and is useful for accurate measurement of chemical concentration.

  11. Second gradient poromechanics

    CERN Document Server

    Sciarra, Giulio; Coussy, Olivier

    2010-01-01

    Second gradient theories have been developed in mechanics for treating different phenomena as capillarity in fluids, plasticity and friction in granular materials or shear band deformations. Here, there is an attempt of formulating a second gradient Biot like model for porous materials. In particular the interest is focused in describing the local dilatant behaviour of a porous material induced by pore opening elastic and capillary interaction phenomena among neighbouring pores and related micro-filtration phenomena by means of a continuum microstructured model. The main idea is to extend the classical macroscopic Biot model by including in the description second gradient effects. This is done by assuming that the surface contribution to the external work rate functional depends on the normal derivative of the velocity or equivalently assuming that the strain work rate functional depends on the porosity and strain gradients. According to classical thermodynamics suitable restrictions for stresses and second g...

  12. Chebyshev polynomial filtered subspace iteration in the Discontinuous Galerkin method for large-scale electronic structure calculations

    CERN Document Server

    Banerjee, Amartya S; Hu, Wei; Yang, Chao; Pask, John E

    2016-01-01

    The Discontinuous Galerkin (DG) electronic structure method employs an adaptive local basis set to solve the equations of density functional theory in a discontinuous Galerkin framework. The methodology is implemented in the Discontinuous Galerkin Density Functional Theory (DGDFT) code for large-scale parallel electronic structure calculations. In DGDFT, the basis is generated on-the-fly to capture the local material physics, and can systematically attain chemical accuracy with only a few tens of degrees of freedom per atom. Hence, DGDFT combines the key advantage of planewave basis sets in terms of systematic improvability with that of localized basis sets in reducing basis size. A central issue for large-scale calculations, however, is the computation of the electron density from the discretized Hamiltonian in an efficient and scalable manner. We show in this work how Chebyshev polynomial filtered subspace iteration (CheFSI) can be used to address this issue and push the envelope in large-scale materials si...

  13. Seismic wave propagation in fractured media: A discontinuous Galerkin approach

    KAUST Repository

    De Basabe, Jonás D.

    2011-01-01

    We formulate and implement a discontinuous Galekin method for elastic wave propagation that allows for discontinuities in the displacement field to simulate fractures or faults using the linear- slip model. We show numerical results using a 2D model with one linear- slip discontinuity and different frequencies. The results show a good agreement with analytic solutions. © 2011 Society of Exploration Geophysicists.

  14. 27 CFR 22.68 - Notice of permanent discontinuance.

    Science.gov (United States)

    2010-04-01

    ... 27 Alcohol, Tobacco Products and Firearms 1 2010-04-01 2010-04-01 false Notice of permanent discontinuance. 22.68 Section 22.68 Alcohol, Tobacco Products and Firearms ALCOHOL AND TOBACCO TAX AND TRADE... Permanent Discontinuance of Use of Tax-Free Alcohol § 22.68 Notice of permanent discontinuance. A...

  15. Discontinuity effects in dynamically loaded tilting pad journal bearings

    DEFF Research Database (Denmark)

    Thomsen, Kim; Klit, Peder; Vølund, Anders

    2011-01-01

    This paper describes two discontinuity effects that can occur when modelling radial tilting pad bearings subjected to high dynamic loads. The first effect to be treated is a pressure build-up discontinuity effect. The second effect is a contact-related discontinuity that disappears when a contact...

  16. Cell orientation gradients on an inverse opal substrate.

    Science.gov (United States)

    Lu, Jie; Zou, Xin; Zhao, Ze; Mu, Zhongde; Zhao, Yuanjin; Gu, Zhongze

    2015-05-20

    The generation of cell gradients is critical for understanding many biological systems and realizing the unique functionality of many implanted biomaterials. However, most previous work can only control the gradient of cell density and this has no effect on the gradient of cell orientation, which has an important role in regulating the functions of many connecting tissues. Here, we report on a simple stretched inverse opal substrate for establishing desired cell orientation gradients. It was demonstrated that tendon fibroblasts on the stretched inverse opal gradient showed a corresponding alignment along with the elongation gradient of the substrate. This "random-to-aligned" cell gradient reproduces the insertion part of many connecting tissues, and thus, will have important applications in tissue engineering.

  17. Multiscale architectured materials with composition and grain size gradients manufactured using high-pressure torsion.

    Science.gov (United States)

    Kang, Ji Yun; Kim, Jung Gi; Park, Hyo Wook; Kim, Hyoung Seop

    2016-05-27

    The concept of multiscale architectured materials is established using composition and grain size gradients. Composition-gradient nanostructured materials are produced from coarse grained interstitial free steels via carburization and high-pressure torsion. Quantitative analyses of the dislocation density using X-ray diffraction and microstructural studies clearly demonstrate the gradients of the dislocation density and grain size. The mechanical properties of the gradient materials are compared with homogeneous nanostructured carbon steel without a composition gradient in an effort to investigate the gradient effect. Based on the above observations, the potential of multiscale architecturing to open a new material property is discussed.

  18. Mass Function Gradients and the Need for Dark Matter

    CERN Document Server

    Taylor, J A

    1998-01-01

    There is substantial evidence that the initial mass function (IMF) may be a function of the local star formation conditions. In particular, the IMF is predicted to flatten with increasing local luminosity density, with the formation of massive stars being preferentially enhanced in brighter regions. If IMF gradients are general features of galaxies, several previous astrophysical measurements, such as the surface mass densities of spirals (obtained assuming constant mass to light ratios), were plagued by substantial systematic errors. In this Letter, calculations which account for possible IMF gradients are presented of surface densities of spiral galaxies. Compared to previous estimates, the mass densities corrected for IMF gradients are higher in the outer regions of the disks. For a model based on the Milky Way but with an IMF scaled according to R136, the rotation curve without the traditional dark halo component falls with galactrocentric radius, though slower than it would without IMF gradients. For a s...

  19. High Gradient Accelerator Research

    Energy Technology Data Exchange (ETDEWEB)

    Temkin, Richard [Massachusetts Inst. of Technology (MIT), Cambridge, MA (United States). Dept. of Physics. Plasma Science and Fusion Center

    2016-07-12

    The goal of the MIT program of research on high gradient acceleration is the development of advanced acceleration concepts that lead to a practical and affordable next generation linear collider at the TeV energy level. Other applications, which are more near-term, include accelerators for materials processing; medicine; defense; mining; security; and inspection. The specific goals of the MIT program are: • Pioneering theoretical research on advanced structures for high gradient acceleration, including photonic structures and metamaterial structures; evaluation of the wakefields in these advanced structures • Experimental research to demonstrate the properties of advanced structures both in low-power microwave cold test and high-power, high-gradient test at megawatt power levels • Experimental research on microwave breakdown at high gradient including studies of breakdown phenomena induced by RF electric fields and RF magnetic fields; development of new diagnostics of the breakdown process • Theoretical research on the physics and engineering features of RF vacuum breakdown • Maintaining and improving the Haimson / MIT 17 GHz accelerator, the highest frequency operational accelerator in the world, a unique facility for accelerator research • Providing the Haimson / MIT 17 GHz accelerator facility as a facility for outside users • Active participation in the US DOE program of High Gradient Collaboration, including joint work with SLAC and with Los Alamos National Laboratory; participation of MIT students in research at the national laboratories • Training the next generation of Ph. D. students in the field of accelerator physics.

  20. Simulation of a Microfluidic Gradient Generator using Lattice Boltzmann Methods

    CERN Document Server

    Simon, Tanaka

    2013-01-01

    Microfluidics provides a powerful and versatile technology to accurately control spatial and temporal conditions for cell culturing and can therefore be used to study cellular responses to gradients. Here we use Lattice Boltzmann methods (LBM) to solve both the Navier-Stokes equation (NSE) for the fluid and the coupled convection-diffusion equation (CDE) for the compounds that form the diffusion-based gradient. The design of a microfluidic chamber for diffusion-based gradients must avoid flow through the cell chamber. This can be achieved by alternately opening the source and the sink channels. The fast toggling of microfluidic valves requires switching between different boundary conditions. We demonstrate that the LBM is a powerful method for handling complex geometries, high Peclet number conditions, discontinuities in the boundary conditions, and multiphysics coupling.

  1. Discontinuous Deformation Analysis Coupling with Discontinuous Galerkin Finite Element Methods for Contact Simulations

    Directory of Open Access Journals (Sweden)

    Yue Sun

    2016-01-01

    Full Text Available A novel coupling scheme is presented to combine the discontinuous deformation analysis (DDA and the interior penalty Galerkin (IPG method for the modeling of contacts. The simultaneous equilibrium equations are assembled in a mixed strategy, where the entries are derived from both discontinuous Galerkin variational formulations and the strain energies of DDA contact springs. The contact algorithms of the DDA are generalized for element contacts, including contact detection criteria, open-close iteration, and contact submatrices. Three representative numerical examples on contact problems are conducted. Comparative investigations on the results obtained by our coupling scheme, ANSYS, and analytical theories demonstrate the accuracy and effectiveness of the proposed method.

  2. Discontinuous deformation analysis based on complementary theory

    Institute of Scientific and Technical Information of China (English)

    2009-01-01

    The contact between blocks is treated by the open-close iteration in the conventional discontinuous deformation analysis (DDA),which needs to introduce spurious springs between two blocks in contact and to assume the normal stiffness and the tangential stiffness (the penalty factors). Unreasonable values of stiffness would result in numerical problems. To avoid the penalty factors and the open-close iteration,we reformulate the DDA as a mixed complementary problem (MiCP) and then choose the path Newton method (PNM) to solve the problem. Some examples including those originally designed by Shi are reanalyzed,which proves feasibility of the proposed procedure.

  3. Singularity and dynamics on discontinuous vector fields

    CERN Document Server

    Luo, Albert CJ

    2006-01-01

    This book discussed fundamental problems in dynamics, which extensively exist in engineering, natural and social sciences. The book presented a basic theory for the interactions among many dynamical systems and for a system whose motions are constrained naturally or artificially. The methodology and techniques presented in this book are applicable to discontinuous dynamical systems in physics, engineering and control. In addition, they may provide useful tools to solve non-traditional dynamics in biology, stock market and internet network et al, which cannot be easily solved by the traditional

  4. Discontinuation of the Bulletin's menu page

    CERN Multimedia

    Publications Section

    2005-01-01

    The menus of the various CERN restaurants will no longer be published in the Bulletin as of Monday 4 April (issue No. 14/2005). The menu pages are being discontinued both as a savings measure and due to the low level of interest in this section of the Bulletin. The most recent survey of Bulletin readers showed that only 13% of the people questioned regularly read the menu section, compared to between 40% and 85% in the case of the other sections. Publications Section SG/CO Tel. 79971

  5. Discontinuation of the Bulletin's menu page

    CERN Multimedia

    Publications Section

    2005-01-01

    The menus of the various CERN restaurants will no longer be published in the Bulletin as of Monday 4 April (issue No. 14/2005). The menu pages are being discontinued both as a savings measure and due to the low level of interest in this section of the Bulletin. The most recent survey of Bulletin readers showed that only 13% of the people questioned regularly read the menu section, compared to between 40% and 85% in the case of the other sections. Publications Section DSU-CO Tel. 79971

  6. Uniform gradient expansions

    Directory of Open Access Journals (Sweden)

    Massimo Giovannini

    2015-06-01

    Full Text Available Cosmological singularities are often discussed by means of a gradient expansion that can also describe, during a quasi-de Sitter phase, the progressive suppression of curvature inhomogeneities. While the inflationary event horizon is being formed the two mentioned regimes coexist and a uniform expansion can be conceived and applied to the evolution of spatial gradients across the protoinflationary boundary. It is argued that conventional arguments addressing the preinflationary initial conditions are necessary but generally not sufficient to guarantee a homogeneous onset of the conventional inflationary stage.

  7. Uniform gradient expansions

    Energy Technology Data Exchange (ETDEWEB)

    Giovannini, Massimo, E-mail: massimo.giovannini@cern.ch [Department of Physics, Theory Division, CERN, 1211 Geneva 23 (Switzerland); INFN, Section of Milan-Bicocca, 20126 Milan (Italy)

    2015-06-30

    Cosmological singularities are often discussed by means of a gradient expansion that can also describe, during a quasi-de Sitter phase, the progressive suppression of curvature inhomogeneities. While the inflationary event horizon is being formed the two mentioned regimes coexist and a uniform expansion can be conceived and applied to the evolution of spatial gradients across the protoinflationary boundary. It is argued that conventional arguments addressing the preinflationary initial conditions are necessary but generally not sufficient to guarantee a homogeneous onset of the conventional inflationary stage.

  8. Gradient systems and mechanical systems

    Institute of Scientific and Technical Information of China (English)

    Fengxiang Mei; Huibin Wu

    2016-01-01

    All types of gradient systems and their properties are discussed. Two problems connected with gradient sys-tems and mechanical systems are studied. One is the direct problem of transforming a mechanical system into a gradi-ent system, and the other is the inverse problem, which is transforming a gradient system into a mechanical system.

  9. Mantle transition zone shear velocity gradients beneath USArray

    Science.gov (United States)

    Schmandt, Brandon

    2012-11-01

    Broadband P-to-s scattering isolated by teleseismic receiver function analysis is used to investigate shear velocity (VS) gradients in the mantle transition zone beneath USArray. Receiver functions from 2244 stations were filtered in multiple frequency bands and migrated to depth through P and S tomography models. The depth-migrated receiver functions were stacked along their local 410 and 660 km discontinuity depths to reduce stack incoherence and more accurately recover the frequency-dependent amplitudes of P410s and P660s. The stacked waveforms were inverted for one-dimensional VS between 320 and 840 km depth. First, a gradient-based inversion was used to find a least-squares solution and a subsequent Monte Carlo search about that solution constrained the range of VS profiles that provide an acceptable fit to the receiver function stacks. Relative to standard references models, all the acceptable models have diminished VS gradients surrounding the 410, a local VS gradient maximum at 490-500 km depth, and an enhanced VS gradient above the 660. The total 410 VS increase of 6.3% is greater than in reference models, and it occurs over a thickness of 20 km. However, 60% of this VS increase occurs over only 6 km. The 20 km total thickness of the 410 and diminished VS gradients surrounding the 410 are potential indications of high water content in the regional transition zone. An enhanced VS gradient overlying the 660 likely results from remnants of subduction lingering at the base of the transition zone. Cool temperatures from slabs subducted since the late Cretaceous and longer-term accumulation of former ocean crust both may contribute to the high gradient above the 660. The shallow depth of the 520 km discontinuity, 490-500 km, implies that the regional mean temperature in the transition zone is 110-160 K cooler than the global mean. A concentrated Vs gradient maximum centered near 660 km depth and a low VS gradient below 675 km confirms that the ringwoodite to

  10. Collisional transport in a plasma with steep gradients

    Energy Technology Data Exchange (ETDEWEB)

    Wang, W.; Okamoto, M.; Nakajima, N.; Murakami, S. [National Inst. for Fusion Science, Toki, Gifu (Japan)

    1999-06-01

    The validity is given to the newly proposed two {delta}f method for neoclassical transport calculation, which can be solve the drift kinetic equation considering effects of steep plasma gradients, large radial electric field, finite banana width, and an orbit topology near the axis. The new method is applied to the study of ion transport with steep plasma gradients. It is found that the ion thermal diffusivity decreases as the scale length of density gradient decreases, while the ion particle flux due to ion-ion self collisions increases with increasing gradient. (author)

  11. An hp-local Discontinuous Galerkin Method for Parabolic Integro-Differential Equations

    KAUST Repository

    Pani, Amiya K.

    2010-06-06

    In this article, a priori error bounds are derived for an hp-local discontinuous Galerkin (LDG) approximation to a parabolic integro-differential equation. It is shown that error estimates in L 2-norm of the gradient as well as of the potential are optimal in the discretizing parameter h and suboptimal in the degree of polynomial p. Due to the presence of the integral term, an introduction of an expanded mixed type Ritz-Volterra projection helps us to achieve optimal estimates. Further, it is observed that a negative norm estimate of the gradient plays a crucial role in our convergence analysis. As in the elliptic case, similar results on order of convergence are established for the semidiscrete method after suitably modifying the numerical fluxes. The optimality of these theoretical results is tested in a series of numerical experiments on two dimensional domains. © 2010 Springer Science+Business Media, LLC.

  12. Discontinued drugs in 2012: endocrine and metabolic.

    Science.gov (United States)

    Colca, Jerry R

    2013-10-01

    This perspective summarizes 42 drug projects in the general areas of endocrine and metabolic diseases that were reported discontinued during 2012. These programs include development projects against diabetes, metabolic complications (including kidney and liver disease), as well as projects that can be described as approaches to treatment of obesity/anorexia, lipids and various inflammatory diseases. Candidates were identified from a search by Informa Healthcare including data available on TreasureTrove as provided by EOID. Additional information was sought using Google, PubMed, HighWire and ClinicalTrials.gov. The summary of discontinued projects in this area for 2012 provides little in the way of specific guidance especially since details of the fate of most projects are often lacking. Nonetheless, it seems clear that none of these projects has hit upon the key aspects of the pathophysiology of the disorders that they were intended to treat, and the most likely cause of failure is the lack of the ability to produce compelling evidence to support the respective business case in the sense of efficacy/potential therapeutic profile.

  13. Separations by gradient elution: why are steep gradient profiles distorted and what is their impact on resolution in reversed-phase liquid chromatography.

    Science.gov (United States)

    Gritti, Fabrice; Guiochon, Georges

    2014-05-30

    The formation of a concentration shock layer of either methanol or acetonitrile used as the modifier in steep RPLC aqueous/organic gradients was predictable from their excess adsorption isotherm and was directly observed from their elution profiles recorded in UV absorption. A discontinuity of the concentration profile of the organic modifier arises and grows along the column. Its effects on the peak shapes and the resolution levels achieved in steep gradient chromatography were measured in the recorded chromatograms of a sample mixture containing 14 different analytes uniformly distributed across the gradient retention window. The results showed severe peak shape deformation for some compounds and a significant degradation of the baseline resolution of weakly (when using acetonitrile) and moderately (when using methanol) retained analytes. Solutions to limit this loss of resolution may lie in changing the initial gradient conditions or in adjusting the curvature of the gradient profile at the column inlet.

  14. Rock discontinuity surface roughness variation with scale

    Science.gov (United States)

    Bitenc, Maja; Kieffer, D. Scott; Khoshelham, Kourosh

    2017-04-01

    ABSTRACT: Rock discontinuity surface roughness refers to local departures of the discontinuity surface from planarity and is an important factor influencing the shear resistance. In practice, the Joint Roughness Coefficient (JRC) roughness parameter is commonly relied upon and input to a shear strength criterion such as developed by Barton and Choubey [1977]. The estimation of roughness by JRC is hindered firstly by the subjective nature of visually comparing the joint profile to the ten standard profiles. Secondly, when correlating the standard JRC values and other objective measures of roughness, the roughness idealization is limited to a 2D profile of 10 cm length. With the advance of measuring technologies that provide accurate and high resolution 3D data of surface topography on different scales, new 3D roughness parameters have been developed. A desirable parameter is one that describes rock surface geometry as well as the direction and scale dependency of roughness. In this research a 3D roughness parameter developed by Grasselli [2001] and adapted by Tatone and Grasselli [2009] is adopted. It characterizes surface topography as the cumulative distribution of local apparent inclination of asperities with respect to the shear strength (analysis) direction. Thus, the 3D roughness parameter describes the roughness amplitude and anisotropy (direction dependency), but does not capture the scale properties. In different studies the roughness scale-dependency has been attributed to data resolution or size of the surface joint (see a summary of researches in [Tatone and Grasselli, 2012]). Clearly, the lower resolution results in lower roughness. On the other hand, have the investigations of surface size effect produced conflicting results. While some studies have shown a decrease in roughness with increasing discontinuity size (negative scale effect), others have shown the existence of positive scale effects, or both positive and negative scale effects. We

  15. Time Rate Gradient Effects and Negative Mass

    Science.gov (United States)

    Miksch, Edmond

    2008-03-01

    The Harvard tower Experiment and tests with accurate atomic clocks show that a clock at a high elevation indicates more elapsed time than a clock at a low elevation, both clocks properly measuring time at their locations. This fact mandates that Newton's first law of motion be rewritten to cite impulse balance rather than force balance. Time rate gradient effects explain how the weight of a precisely vertical and precisely uniform electric field or a precisely vertical and precisely uniform magnetic field is supported in a precisely unidirectional gravitational field. Time rate gradient effects also explain how the weight of a unidirectional gravitational field is reacted. It is confirmed that the mass density of the gravitational field is negative. http://www.TimeRateGradient.com; http://www.Negative-Mass.com; http://www.EinsteinsElevator.com

  16. Serotonin reuptake inhibitor discontinuation syndrome: a hypothetical definition. Discontinuation Consensus panel.

    Science.gov (United States)

    Schatzberg, A F; Haddad, P; Kaplan, E M; Lejoyeux, M; Rosenbaum, J F; Young, A H; Zajecka, J

    1997-01-01

    Adverse events following discontinuation from serotonin reuptake inhibitors (SRIs) are being reported in the literature with increasing frequency; the frequency and severity of these symptoms appear to vary according to the half-life of the SRI, e.g., the incidence appears higher with the shorter half-life agents than with fluoxetine, which has an extended half-life. Yet, there have been no systematic studies of the phenomenon to date. Therefore, a group of experts convened in Phoenix, Arizona, to develop a clear description or definition of the phenomenon based on these reports. The SRI discontinuation syndrome, referred to as "withdrawal symptoms" in many anecdotal case reports, is distinctly different from the classic withdrawal syndrome associated with alcohol and barbiturates. Anti-depressants are not associated with dependence or drug-seeking behavior. SRI discontinuation symptoms tend to be short-lived and self-limiting, but can be troublesome. They may emerge when an SRI is abruptly discontinued, when doses are missed, and less frequently, during dosage reduction. In addition, the symptoms are not attributable to any other cause and can be reversed when the original agent is reinstituted, or one that is pharmacologically similar is substituted. SRI discontinuation symptoms, in most cases, may be minimized by slowly tapering antidepressant therapy, but there have been several case reports where symptoms occurred consistently even through repeated attempts to taper therapy. Physical symptoms include problems with balance, gastrointestinal and flu-like symptoms, and sensory and sleep disturbances. Psychological symptoms include anxiety and/or agitation, crying spells, and irritability. Further analyses of data bases and clinical studies are needed to define this proposed syndrome more clearly.

  17. Dropwise Condensation on a Radial Gradient Surface

    Science.gov (United States)

    Macner, Ashley; Daniel, Susan; Steen, Paul

    2013-11-01

    In transient dropwise condensation from steam onto a cool surface, distributions of drops evolve by nucleation, growth, and coalescence. This study examines how surface functionalization affects drop growth and coalescence. Surfaces are treated by silanization to deliver either a spatially uniform contact-angle (hydrophilic, neutral, and hydrophobic) or a radial gradient of contact-angles. The time evolution of number-density and associated drop-size distributions are reported. For a typical condensation experiment on a uniform angle surface, the number-density curves show two regimes: an initial increase in number-density as a result of nucleation and a subsequent decrease in number-density as a result of larger scale coalescence events. Without a removal mechanism, the fractional coverage, regardless of treatment, approaches unity. For the same angle-surface, the associated drop-size distributions progress through four different shapes along the growth curve. In contrast, for a radial gradient surface where removal by sweeping occurs, the number-density increases and then levels off to a value close to the maximum number-density that is well below unity coverage and only two shapes of distributions are observed. Implications for heat transfer will be discussed. This work was supported by a NASA Office of the Chief Technologist's Space Technology Research Fellowship.

  18. Automated extraction and analysis of rock discontinuity characteristics from 3D point clouds

    Science.gov (United States)

    Bianchetti, Matteo; Villa, Alberto; Agliardi, Federico; Crosta, Giovanni B.

    2016-04-01

    A reliable characterization of fractured rock masses requires an exhaustive geometrical description of discontinuities, including orientation, spacing, and size. These are required to describe discontinuum rock mass structure, perform Discrete Fracture Network and DEM modelling, or provide input for rock mass classification or equivalent continuum estimate of rock mass properties. Although several advanced methodologies have been developed in the last decades, a complete characterization of discontinuity geometry in practice is still challenging, due to scale-dependent variability of fracture patterns and difficult accessibility to large outcrops. Recent advances in remote survey techniques, such as terrestrial laser scanning and digital photogrammetry, allow a fast and accurate acquisition of dense 3D point clouds, which promoted the development of several semi-automatic approaches to extract discontinuity features. Nevertheless, these often need user supervision on algorithm parameters which can be difficult to assess. To overcome this problem, we developed an original Matlab tool, allowing fast, fully automatic extraction and analysis of discontinuity features with no requirements on point cloud accuracy, density and homogeneity. The tool consists of a set of algorithms which: (i) process raw 3D point clouds, (ii) automatically characterize discontinuity sets, (iii) identify individual discontinuity surfaces, and (iv) analyse their spacing and persistence. The tool operates in either a supervised or unsupervised mode, starting from an automatic preliminary exploration data analysis. The identification and geometrical characterization of discontinuity features is divided in steps. First, coplanar surfaces are identified in the whole point cloud using K-Nearest Neighbor and Principal Component Analysis algorithms optimized on point cloud accuracy and specified typical facet size. Then, discontinuity set orientation is calculated using Kernel Density Estimation and

  19. Monotone projected gradient methods for large-scale box-constrained quadratic programming

    Institute of Scientific and Technical Information of China (English)

    ZHOU Bin; GAO Li; DAI Yuhong

    2006-01-01

    Inspired by the success of the projected Barzilai-Borwein (PBB) method for largescale box-constrained quadratic programming, we propose and analyze the monotone projected gradient methods in this paper. We show by experiments and analyses that for the new methods,it is generally a bad option to compute steplengths based on the negative gradients. Thus in our algorithms, some continuous or discontinuous projected gradients are used instead to compute the steplengths. Numerical experiments on a wide variety of test problems are presented, indicating that the new methods usually outperform the PBB method.

  20. Role of the transition zone and 660 km discontinuity in mantle dynamics

    Science.gov (United States)

    Ringwood, A. E.

    1994-10-01

    Recent seismic evidence suggests that subducted slabs experience resistance to further descent when they encounter the 660 km seismic discontinuity. Several possible causes of this resistance are evaluated. It is concluded that the chemical composition of the lower mantle is similar to that of the upper mantle, and that compositional change is therefore unlikely to be the cause of resistance to slab penetration. The proposal that a large increase of viscosity at the 660 km discontinuity impedes descending slabs is also rejected. However, three other factors are identified, each of which is capable of causing substantial resistance to descending slabs: (1) the negative slope of the transformation of silicate spinel to Mg-perovskite+magnesiowuestite; (2) differentiation of oceanic lithosphere into basaltic and depleted peridotitic layers, causing the slab to be buoyant compared with surrounding mantle pyrolite between depths of 660-800 km; (3) the accumulation of former oceanic crust to produce a gravitationally stable layer of garnetite (about 50 km thick) on top of the 660 km discontinuity. The combined effects of these sources of resistance provide a filter for subducted slabs. Those slabs with seismic zones extending below 600 km may possess sufficient negative buoyancy and strength to overcome the barriers and penetrate into the lower mantle. However, the resistance causes strong buckling and plastic thickening of these slabs, which accumulate to form huge blobs or 'megaliths' underneath the 660 km discontinuity. In contrast, slabs with seismic zones extending no deeper than 300 km possess much smaller degrees of negative buoyancy and strength and hence are unable to penetrate the 660 km discontinuity. Slabs of this type are recycled within the transition zone and upper mantle. Mixing and petrological homogenization processes are less efficient in the transition zone than in the upper mantle (above 400 km). The transition zone is composed mainly of ancient slabs

  1. [Discontinuation of depression treatment from the perspective of suicide prevention].

    Science.gov (United States)

    Cho, Yoshinori

    2012-01-01

    It is assumed that discontinuation of treatment for depression may increase the risk of suicide. A population-based register study in Denmark did not find a lower risk among people over age 50 who followed treatment in comparison with those who discontinued treatment with antidepressants at an early stage. This result, however, does not allow us to think superficially that early discontinuation of treatment does not increase the risk of suicide. It is because the study has limitations without information of such as psychiatric diagnoses, severity of the depressed state, and reasons of discontinuation. It is safe for clinicians to aim at preventing discontinuation of treatment. Particularly, in Japan and South Korea where there is a sociocultural climate of tolerability for suicide, suicide can occur in milder depressed state and discontinuation of treatment should be taken more seriously than in Western countries.

  2. Quantitative identification of technological discontinuities using simulation modeling

    CERN Document Server

    Park, Hyunseok

    2016-01-01

    The aim of this paper is to develop and test metrics to quantitatively identify technological discontinuities in a knowledge network. We developed five metrics based on innovation theories and tested the metrics by a simulation model-based knowledge network and hypothetically designed discontinuity. The designed discontinuity is modeled as a node which combines two different knowledge streams and whose knowledge is dominantly persistent in the knowledge network. The performances of the proposed metrics were evaluated by how well the metrics can distinguish the designed discontinuity from other nodes on the knowledge network. The simulation results show that the persistence times # of converging main paths provides the best performance in identifying the designed discontinuity: the designed discontinuity was identified as one of the top 3 patents with 96~99% probability by Metric 5 and it is, according to the size of a domain, 12~34% better than the performance of the second best metric. Beyond the simulation ...

  3. Evaluating Discontinuities in Complex Systems: Toward Quantitative Measures of Resilience

    Directory of Open Access Journals (Sweden)

    Craig Stow

    2007-06-01

    Full Text Available The textural discontinuity hypothesis (TDH is based on the observation that animal body mass distributions exhibit discontinuities that may reflect the texture of the landscape available for exploitation. This idea has been extended to other complex systems, hinting that the identification and quantification of discontinuities in the distributions of appropriate variables may provide clues to emergent system properties such as resilience. We propose a discontinuity index, based on the vector norm of the full assemblage of observed discontinuities, as a means to quantify and compare this characteristic among systems. We also evaluate four methods to identify the number and location of the most prominent discontinuities. Although results of the four methods are similar, they are not identical, and we conclude that this problem is best addressed with a consistent operationally defined approach in an adaptive inference framework.

  4. The Implications of Discontinuities for Testing Theories of Turbulence in the Solar Wind

    CERN Document Server

    Turner, A J; Gogoberidze, G

    2012-01-01

    In-situ observations of magnetic field fluctuations in the solar wind show a broad continuum in the power spectral density (PSD) with a power-law range of scaling often identified as an inertial range of magnetohydrodynamic turbulence. However, both turbulence and discontinuities are present in the solar wind on these inertial range of scales. We identify and remove these discontinuities using a method which for the first time does not impose a characteristic scale on the resultant time-series. The PSD of vector field fluctuations obtained from at-a point observations is a tensor that can in principle be anisotropic with scaling exponents that depend on background field and flow direction. This provides a key test of theories of turbulence. We find that the removal of discontinuities from the observed time-series can significantly alter the PSD trace anisotropy. It becomes quasi-isotropic, in that the observed exponent does not vary with the background field angle once the discontinuities are removed. This is...

  5. Formation of Rotational Discontinuities in Compressive three-dimensional MHD Turbulence

    CERN Document Server

    Yang, Liping; He, Jiansen; Tu, Chuanyi; Wang, Linghua; Marsch, Eckart; Wang, Xin; Zhang, Shaohua; Feng, Xueshang

    2015-01-01

    Measurements of solar wind turbulence reveal the ubiquity of discontinuities. In this study, we investigate how the discontinuities, especially rotational discontinuities (RDs), are formed in magnetohydrodynamic (MHD) turbulence. In a simulation of the decaying compressive three-dimensional (3-D) MHD turbulence with an imposed uniform background magnetic field, we detect RDs with sharp field rotations and little variations of magnetic field intensity as well as mass density. At the same time, in the de Hoffman-Teller (HT) frame, the plasma velocity is nearly in agreement with the Alfv\\'{e}n speed, and is field-aligned on both sides of the discontinuity. We take one of the identified RDs to analyze in details its 3-D structure and temporal evolution. By checking the magnetic field and plasma parameters, we find that the identified RD evolves from the steepening of the Alfv\\'{e}n wave with moderate amplitude, and that steepening is caused by the nonuniformity of the Alfv\\'{e}n speed in the ambient turbulence.

  6. Gradient Bundle Analysis: A Full Topological Approach to Chemical Bonding

    CERN Document Server

    Morgenstern, Amanda

    2016-01-01

    The "chemical bond" is a central concept in molecular sciences, but there is no consensus as to what a bond actually is. Therefore, a variety of bonding models have been developed, each defining the structure of molecules in a different manner with the goal of explaining and predicting chemical properties. This thesis describes the initial development of gradient bundle analysis (GBA), a chemical bonding model that creates a high resolution picture of chemical interactions within the charge density framework. GBA is based on concepts from the quantum theory of atoms in molecules (QTAIM), but uses a more complete picture of the topology and geometry of the electron charge density to understand and predict bonding interactions. Gradient bundles are defined as volumes bounded by zero-flux surfaces (ZFSs) in the gradient of the charge density with well-defined energies. The structure of gradient bundles provides an avenue for detecting the locations of valence electrons, which correspond to reactive regions in a ...

  7. Subcellular fractionation on Percoll gradient of mossy fiber synaptosomes: evoked release of glutamate, GABA, aspartate and glutamate decarboxylase activity in control and degranulated rat hippocampus.

    Science.gov (United States)

    Taupin, P; Ben-Ari, Y; Roisin, M P

    1994-05-02

    Using discontinuous density gradient centrifugation in isotonic Percoll sucrose, we have characterized two subcellular fractions (PII and PIII) enriched in mossy fiber synaptosomes and two others (SII and SIII) enriched in small synaptosomes. These synaptosomal fractions were compared with those obtained from adult hippocampus irradiated at neonatal stage to destroy granule cells and their mossy fibers. Synaptosomes were viable as judged by their ability to release aspartate, glutamate and GABA upon K+ depolarization. After irradiation, compared to the control values, the release of glutamate and GABA was decreased by 57 and 74% in the PIII fraction, but not in the other fractions and the content of glutamate, aspartate and GABA was also decreased in PIII fraction by 62, 44 and 52% respectively. These results suggest that mossy fiber (MF) synaptosomes contain and release glutamate and GABA. Measurement of the GABA synthesizing enzyme, glutamate decarboxylase, exhibited no significant difference after irradiation, suggesting that GABA is not synthesized by this enzyme in mossy fibers.

  8. Constrained length minimum inductance gradient coil design.

    Science.gov (United States)

    Chronik, B A; Rutt, B K

    1998-02-01

    A gradient coil design algorithm capable of controlling the position of the homogeneous region of interest (ROI) with respect to the current-carrying wires is required for many advanced imaging and spectroscopy applications. A modified minimum inductance target field method that allows the placement of a set of constraints on the final current density is presented. This constrained current minimum inductance method is derived in the context of previous target field methods. Complete details are shown and all equations required for implementation of the algorithm are given. The method has been implemented on computer and applied to the design of both a 1:1 aspect ratio (length:diameter) central ROI and a 2:1 aspect ratio edge ROI gradient coil. The 1:1 design demonstrates that a general analytic method can be used to easily obtain very short gradient coil designs for use with specialized magnet systems. The edge gradient design demonstrates that designs that allow imaging of the neck region with a head sized gradient coil can be obtained, as well as other applications requiring edge-of-cylinder regions of uniformity.

  9. A general approach for calculating coupling impedances of small discontinuities

    CERN Document Server

    Kurennoy, S S; Stupakov, G V; Kurennoy, Sergey S; Gluckstern, Robert L; Stupakov, Gennady V

    1995-01-01

    A general theory of the beam interaction with small discontinuities of the vacuum chamber is developed taking into account the reaction of radiated waves back on the discontinuity. The reactive impedance calculated earlier is reproduced as the first order, and the resistive one as the second order of a perturbation theory based on this general approach. The theory also gives, in a very natural way, the results for the trapped modes due to small discontinuities obtained earlier by a different method.

  10. A General approach for calculating coupling impedances of small discontinuities

    Science.gov (United States)

    Kurennoy, Sergei S.; Gluckstern, Robert L.; Stupakov, Gennady V.

    A general theory of the beam interaction with small discontinuities of the vacuum chamber is developed taking into account the reaction of radiated waves back on the discontinuity. The reactive impedance calculated earlier is reproduced as the first order, and the resistive one as the second order of a perturbation theory based on this general approach. The theory also gives, in a very natural way, the results for the trapped modes due to small discontinuities obtained earlier by a different method.

  11. Discontinuous Mixed Covolume Methods for Linear Parabolic Integrodifferential Problems

    Directory of Open Access Journals (Sweden)

    Ailing Zhu

    2014-01-01

    Full Text Available The semidiscrete and fully discrete discontinuous mixed covolume schemes for the linear parabolic integrodifferential problems on triangular meshes are proposed. The error analysis of the semidiscrete and fully discrete discontinuous mixed covolume scheme is presented and the optimal order error estimate in discontinuous H(div and first-order error estimate in L2 are obtained with the lowest order Raviart-Thomas mixed element space.

  12. On stability of discontinuous systems via vector Lyapunov functions

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    This paper deals with the stability of systems with discontinuous righthand side (with solutions in Filippov's sense) via locally Lipschitz continuous and regular vector Lyapunov functions. A new type of "set-valued derivative" of vector Lyapunov functions is introduced, some generalized comparison principles on dis(c)ontinuous systems are shown. Furthermore, Lyapunov stability theory is developed for a class of discontinuous systems based on locally Lipschitz continuous and regular vector Lyapunov functions.

  13. Discontinuous Galerkin Methods with Trefftz Approximation

    CERN Document Server

    Kretzschmar, Fritz; Tsukerman, Igor; Weiland, Thomas

    2013-01-01

    We present a novel Discontinuous Galerkin Finite Element Method for wave propagation problems. The method employs space-time Trefftz-type basis functions that satisfy the underlying partial differential equations and the respective interface boundary conditions exactly in an element-wise fashion. The basis functions can be of arbitrary high order, and we demonstrate spectral convergence in the $\\Lebesgue_2$-norm. In this context, spectral convergence is obtained with respect to the approximation error in the entire space-time domain of interest, i.e. in space and time simultaneously. Formulating the approximation in terms of a space-time Trefftz basis makes high order time integration an inherent property of the method and clearly sets it apart from methods, that employ a high order approximation in space only.

  14. RURAL TOURISM IN ROMANIA - EVOLUTIONS AND DISCONTINUITIES

    Directory of Open Access Journals (Sweden)

    Silviu COSTACHIE

    2011-12-01

    Full Text Available This paper analyzes the evolution of rural tourism since the early '70s, the time of onset, and indicates the discontinuity recorded especially after 1989 until the brink of the preparation for Romania's joining the European Union and the present state, one far behind the countries with extremely high degree of urbanization and industrialization, probably as a result of a lack of strategy for this form of tourism in which the beneficiary is the Ministry of Tourism, as the health tourism and ecotourism have recently had. The location of many villages in areas of outstanding natural landscapes, the richness and variety of cultural heritage that endows them, are issues related to an increased tourism potential that can be capitalized and those unique tourism products that can not be seen, admired and offered by other countries.

  15. Interfaces of the discontinuation of breastfeeding

    Directory of Open Access Journals (Sweden)

    Mirna Albuquerque Frota

    2016-06-01

    Full Text Available The objective was to identify conditions for the discontinuation of exclusive breastfeeding. This is a qualitative study developed in a Primary Health Care Unit (PHCU in Fortaleza, Ceará, Brazil. It included 20 mothers of children aged 0-6 months old who were breastfeeding. The reports evidenced three categories: Guidance received during prenatal care; Meanings of breastfeeding; Determinants of early weaning. It can be concluded that part of the determinants of early weaning is in the building of or failure to build knowledge about breastfeeding. Cultural concepts or myths are inadequate and socially reproduced due to failure, on the part of health professionals who assist expectant mothers during prenatal care or those who assist postpartum women, to deconstruct them.

  16. Discontinuous Galerkin Methods for Turbulence Simulation

    Science.gov (United States)

    Collis, S. Scott

    2002-01-01

    A discontinuous Galerkin (DG) method is formulated, implemented, and tested for simulation of compressible turbulent flows. The method is applied to turbulent channel flow at low Reynolds number, where it is found to successfully predict low-order statistics with fewer degrees of freedom than traditional numerical methods. This reduction is achieved by utilizing local hp-refinement such that the computational grid is refined simultaneously in all three spatial coordinates with decreasing distance from the wall. Another advantage of DG is that Dirichlet boundary conditions can be enforced weakly through integrals of the numerical fluxes. Both for a model advection-diffusion problem and for turbulent channel flow, weak enforcement of wall boundaries is found to improve results at low resolution. Such weak boundary conditions may play a pivotal role in wall modeling for large-eddy simulation.

  17. Discontinuity and complexity in nonlinear physical systems

    CERN Document Server

    Baleanu, Dumitru; Luo, Albert

    2014-01-01

    This unique book explores recent developments in experimental research in this broad field, organized in four distinct sections. Part I introduces the reader to the fractional dynamics and Lie group analysis for nonlinear partial differential equations. Part II covers chaos and complexity in nonlinear Hamiltonian systems, important to understand the resonance interactions in nonlinear dynamical systems, such as Tsunami waves and wildfire propagations; as well as Lev flights in chaotic trajectories, dynamical system synchronization and DNA information complexity analysis. Part III examines chaos and periodic motions in discontinuous dynamical systems, extensively present in a range of systems, including piecewise linear systems, vibro-impact systems and drilling systems in engineering. And in Part IV, engineering and financial nonlinearity are discussed. The mechanism of shock wave with saddle-node bifurcation and rotating disk stability will be presented, and the financial nonlinear models will be discussed....

  18. Analysis of three-spacecraft data using planar reciprocal vectors: methodological framework and spatial gradient estimation

    Directory of Open Access Journals (Sweden)

    J. Vogt

    2009-08-01

    Full Text Available In the context of ESA's Cluster mission, four-point array techniques are widely used to analyze space plasma phenomena such as shocks and discontinuities, waves and turbulence, and spatial gradients. Due to failures of single instruments on the Cluster spacecraft fleet, there is also need for array processing of three-point measurements. In this paper we identify planar reciprocal vectors as a generic tool for this purpose. The class of three-point techniques introduced here includes methods for discontinuity analysis, wave identification, and spatial gradient determination. Parameter vectors can be resolved fully in the spacecraft plane but further assumptions or physical constraints have to be specified to estimate the normal components. We focus on the gradient estimation problem where we check and illustrate our approach using Cluster measurements.

  19. DISCONTINUOUS SOLUTIONS IN L∞ FOR HAMILTON-JACOBI EQUATIONS

    Institute of Scientific and Technical Information of China (English)

    2000-01-01

    An approach is introduced to construct global discontinuous solutions in L∞ for Hamilton Jacobi equations. This approach allows the initial data only in L∞ and applies to the equations with nonconvex Hamiltonians. The profit functions are introduced to formulate the notion of discontinuous solutions in L. The existence of global discontinuous solutions in L∞ is established. These solutions in L∞ coincide with the viscosity solutions and the minimax solutions, provided that the initial data are continuous. A prototypical equation is analyzed to examine the L∞ stability of our L∞ solutions. The analysis also shows that global discontinuous solutions are determined by the topology in which the initial data are approximated.

  20. Evaluating the Capability of the Flux-Limiter Schemes in Capturing Strong Shocks and Discontinuities

    Directory of Open Access Journals (Sweden)

    Iman Harimi

    2013-01-01

    Full Text Available A numerical study is conducted to investigate the capability of the flux-limiter TVD schemes in capturing sharp discontinuities like shock waves. For this purpose, four classical test problems are considered such as slowly moving shock, gas Riemann problem with high density and pressure ratios, shock wave interaction with a density disturbance and shock-acoustic interaction. The governing equations consist of one-dimensional and quasi-one-dimensional Euler equations solved using an in-house numerical code. In order to validate the solution, the obtained results are compared with other results found in the literature.

  1. Bigravity from gradient expansion

    Energy Technology Data Exchange (ETDEWEB)

    Yamashita, Yasuho [Yukawa Institute for Theoretical Physics, Kyoto University,606-8502, Kyoto (Japan); Tanaka, Takahiro [Yukawa Institute for Theoretical Physics, Kyoto University,606-8502, Kyoto (Japan); Department of Physics, Kyoto University,606-8502, Kyoto (Japan)

    2016-05-04

    We discuss how the ghost-free bigravity coupled with a single scalar field can be derived from a braneworld setup. We consider DGP two-brane model without radion stabilization. The bulk configuration is solved for given boundary metrics, and it is substituted back into the action to obtain the effective four-dimensional action. In order to obtain the ghost-free bigravity, we consider the gradient expansion in which the brane separation is supposed to be sufficiently small so that two boundary metrics are almost identical. The obtained effective theory is shown to be ghost free as expected, however, the interaction between two gravitons takes the Fierz-Pauli form at the leading order of the gradient expansion, even though we do not use the approximation of linear perturbation. We also find that the radion remains as a scalar field in the four-dimensional effective theory, but its coupling to the metrics is non-trivial.

  2. Increasing SLEDed Linac Gradient

    Energy Technology Data Exchange (ETDEWEB)

    Farkas, Zoltan D

    2001-11-08

    This note will show how to increase the SLED [1] gradient by varying Q{sub e}, the external Q of the SLED cavity, by increasing its Q{sub 0} and by increasing the compression ratio. If varying the external Q is to be effective, then the copper losses should be small so that Q{sub 0} >> Q{sub e}. Methods of varying Q{sub e} will be indicated but no experimental data will be presented. If we increase the klystron pulse width from 3.5 to 5 {micro}S and increase Q{sub 0} from the present 100000 to 300000, then the gradient increases by 19% and the beam energy increases from 50 to 60 GeV. This note will also discuss SLED operation at 11424 MHz, the NLC frequency. Without Q{sub e} switching, using SLED at 11424 MHz increases the SLAC gradient from 21 MV/m to 34 MV/m, and at the same repetition rate, uses about 1/5 of rf average power. If we also double the compression ratio, we reach 47 MV/m and over 100 GeV beam energy.

  3. Dropwise condensation on a cold gradient substrate

    Science.gov (United States)

    Macner, Ashley; Daniel, Susan; Steen, Paul

    2012-11-01

    Distributions of drops that arise from dropwise condensation evolve by nucleation, growth, and coalescence of drops. An understanding of how surface-energy gradients applied to the substrate affect drop growth and coalescence is needed for design of effective surfaces for large-scale dropwise condensation. Transient dropwise condensation from a vapor phase onto a cold and chemically treated surface is reported. The surfaces were treated to deliver either a uniform contact-angle or a gradient of contact-angles by silanization. The time evolution of drop-size and number-density distributions is reported. For a typical condensation experiment, the drop distributions advance through two stages: an increase in drop density as a result of nucleation and a decrease in drop density as a result of larger scale coalescence events. Because the experiment is transient in nature, the shape of the distribution can be used to predict the number of drop generations and their stage of development. Preliminary results for gradient surfaces will be discussed and compared against observations of behavior on uniformly coated surfaces. NASA Space Technology Research Fellowship (NSTRF).

  4. High order discontinuous Galerkin discretizations with discontinuity resolution within the cell

    Science.gov (United States)

    Ekaterinaris, John; Panourgias, Konstantinos

    2016-11-01

    The nonlinear filter of Yee et al. and used for low dissipative well-balanced high order accurate finite-difference schemes is adapted to the finite element context of discontinuous Galerkin (DG) discretizations. The performance of the proposed nonlinear filter for DG discretizations is demonstrated for different orders of expansions for one- and multi-dimensional problems with exact solutions. It is shown that for higher order discretizations discontinuity resolution within the cell is achieved and the design order of accuracy is preserved. The filter is applied for inviscid and viscous flow test problems including strong shocks interactions to demonstrate that the proposed dissipative mechanism for DG discretizations yields superior results compared to the results obtained with the TVB limiter and high-order hierarchical limiting. The proposed approach is suitable for p-adaptivity in order to locally enhance resolution of three-dimensional flow simulations.

  5. A nonlinear filter for high order discontinuous Galerkin discretizations with discontinuity resolution within the cell

    Science.gov (United States)

    Panourgias, Konstantinos T.; Ekaterinaris, John A.

    2016-12-01

    The nonlinear filter introduced by Yee et al. (1999) [27] and extensively used in the development of low dissipative well-balanced high order accurate finite-difference schemes is adapted to the finite element context of discontinuous Galerkin (DG) discretizations. The filter operator is constructed in the canonical computational domain for the standard cubical element where it is applied to the computed conservative variables in a direction per direction basis. Filtering becomes possible for all element types in unstructured meshes using collapsed coordinate transformations. The performance of the proposed nonlinear filter for DG discretizations is demonstrated and evaluated for different orders of expansions for one-dimensional and multidimensional problems with exact solutions. It is shown that for higher order discretizations discontinuity resolution within the cell is achieved and the design order of accuracy is preserved. The filter is applied for a number of standard inviscid flow test problems including strong shocks interactions to demonstrate that the proposed dissipative mechanism for DG discretizations yields superior results compared to the results obtained with the total variation bounded (TVB) limiter and high-order hierarchical limiting. The proposed approach is suitable for p-adaptivity in order to locally enhance resolution of three-dimensional flow simulations that include discontinuities and complex flow features.

  6. The Differential Virial Theorem with Gradient Formulas for the Operators

    CERN Document Server

    Finley, James P

    2016-01-01

    A gradient dependent formula is derived for the spinless one-particle density-matrix operator z from the differential virial theorem. A gradient dependent formula is also derived for a spinless one-particle density-matrix operator that can replace the two operators of the differential virial theorem that arise from the kinetic energy operator. Other operators are also derived that can replace the operators mentioned above in the differential virial theorem; these operators depend on the real part of spinless one-particle density-matrix.

  7. Reinforcement Learning by Value Gradients

    CERN Document Server

    Fairbank, Michael

    2008-01-01

    The concept of the value-gradient is introduced and developed in the context of reinforcement learning. It is shown that by learning the value-gradients exploration or stochastic behaviour is no longer needed to find locally optimal trajectories. This is the main motivation for using value-gradients, and it is argued that learning value-gradients is the actual objective of any value-function learning algorithm for control problems. It is also argued that learning value-gradients is significantly more efficient than learning just the values, and this argument is supported in experiments by efficiency gains of several orders of magnitude, in several problem domains. Once value-gradients are introduced into learning, several analyses become possible. For example, a surprising equivalence between a value-gradient learning algorithm and a policy-gradient learning algorithm is proven, and this provides a robust convergence proof for control problems using a value function with a general function approximator.

  8. Discontinuation of Denosumab therapy for osteoporosis: A systematic review and position statement by ECTS.

    Science.gov (United States)

    Tsourdi, Elena; Langdahl, Bente; Cohen-Solal, Martine; Aubry-Rozier, Bérengere; Eriksen, Erik Fink; Guañabens, Nuria; Obermayer-Pietsch, Barbara; Ralston, Stuart H; Eastell, Richard; Zillikens, M Carola

    2017-08-05

    The optimal duration of osteoporosis treatment is controversial. As opposed to bisphosphonates, denosumab does not incorporate into bone matrix and bone turnover is not suppressed after its cessation. Recent reports imply that denosumab discontinuation may lead to an increased risk of multiple vertebral fractures. The European Calcified Tissue Society (ECTS) formed a working group to perform a systematic review of existing literature on the effects of stopping denosumab and provide advice on management. Data from phase 2 and 3 clinical trials underscore a rapid decrease of bone mineral density (BMD) and a steep increase in bone turnover markers (BTMs) after discontinuation of denosumab. Clinical case series report multiple vertebral fractures after discontinuation of denosumab and a renewed analysis of FREEDOM and FREEDOM Extension Trial suggests, albeit does not prove, that the risk of multiple vertebral fractures may be increased when denosumab is stopped due to a rebound increase in bone resorption. There appears to be an increased risk of multiple vertebral fractures after discontinuation of denosumab although strong evidence for such an effect and for measures to prevent the occurring bone loss is lacking. Clinicians and patients should be aware of this potential risk. Based on available data, a re-evaluation should be performed after 5years of denosumab treatment. Patients considered at high fracture risk should either continue denosumab therapy for up to 10years or be switched to an alternative treatment. For patients at low risk, a decision to discontinue denosumab could be made after 5years, but bisphosphonate therapy should be considered to reduce or prevent the rebound increase in bone turnover. However, since the optimal bisphosphonate regimen post-denosumab is currently unknown continuation of denosumab can also be considered until results from ongoing trials become available. Based on current data, denosumab should not be stopped without considering

  9. Weight regain after discontinuation of topiramate treatment in patients with migraine: a prospective observational study.

    Science.gov (United States)

    Verrotti, Alberto; Parisi, Pasquale; Agostinelli, Sergio; Loiacono, Giulia; Marra, Francesca; Coppola, Giangennaro; Pisani, Laura Rosa; Gorgone, Gaetano; Striano, Pasquale; Pisani, Francesco; Belcastro, Vincenzo

    2015-02-01

    To monitor weight regain after therapy discontinuation in patients with migraine experiencing weight loss during topiramate (TPM) treatment. Patients with migraine without aura were enrolled in this observational prospective study. Weight, body mass index (BMI), waist circumference, systolic and diastolic blood pressure, plasma levels of total cholesterol, low-density lipoprotein cholesterol, high-density lipoprotein cholesterol, triglycerides, leptin, and ghrelin, and homeostatic model assessment of insulin resistance (HOMA-IR) were evaluated before starting TPM (T1), at 3 (T2) and 6 (T3) months of treatment and 6 months after withdrawal of TPM (T4). Weight loss/regain was considered as a change of 5% of pre-TPM body weight. A total of 241 patients were analyzed. Of these, 87 (36%) patients experienced weight loss on TPM medication. During TPM therapy significant reductions in mean values of weight (pweight regain after therapy discontinuation. Loss of body weight is a reversible effect, which at 6 months after TPM discontinuation shows a clear trend to return to baseline values. HOMA-IR is the only predictive factor of weight regain.

  10. [Probable flora: an expression mean of ecological gradients in France].

    Science.gov (United States)

    Garbolino, Emmanuel; De Ruffray, Patrice; Brisse, Henry; Grandjouan, Gilles

    2013-02-01

    The application of the criterion of fidelity of plants to plants over four millions botanical observations in France is considered to characterize the ecology of 215,000 phytosociological surveys. Among those discriminant plants, some are missing of the surveys, but they can have a certain probability of occurrence: these plants are called "probable plants" and they represent the "probable flora" of a territory. The study of their geographical distribution shows ecological gradients of flora across France in a better way than only considering the botanical observations. In fact, this method mitigates the discontinuities of taxa observations whose absence may be due to historical and/or anthropogenic factors.

  11. Three-dimensional shock wave diffraction off a discontinuous edge

    Science.gov (United States)

    Cooppan, S.; Skews, B.

    2017-03-01

    The interaction of three-dimensional vortex flows was investigated through vortex shedding off a discontinuous edge. Two wedges of 14.5° wedge angle (up and downstream edges) were separated by an offset. The size of the offset (5, 10, and 20 mm) and the Mach number (Mach 1.32, 1.42, and 1.6) were the key parameters investigated. Experimental images were taken and computational simulations were run; a close relation was found between the two. This enabled the three-dimensional effects of the flow to be studied and analysed. It was found, as the offset increased in size, the vortices shed off the up and downstream edges took a longer time to merge and the strength of the interaction was weaker. The vortex topology changed with a larger offset; the downstream vortex was thinner (in terms of cross-sectional diameter) adjacent to the offset, which is an indication of a change in density, than the rest of the vortex along the downstream diffraction edge. This particular feature was more prevalent at lower Mach numbers. The effect of a higher Mach number was to increase the rate of dissipation of the vortices, lengthen the shear layer due to the higher upstream velocity, and make the vortex profile elliptical.

  12. 27 CFR 25.277 - Discontinuance of operations.

    Science.gov (United States)

    2010-04-01

    ... BUREAU, DEPARTMENT OF THE TREASURY LIQUORS BEER Pilot Brewing Plants § 25.277 Discontinuance of operations. When operations of a pilot brewing plant are to be discontinued, the operator shall notify the... operations have been completed and all beer at the premises has been disposed of and accounted for, the...

  13. EVALUATING DISCONTINUITIES IN COMPLEX SYSTEMS: TOWARD QUANTITATIVE MEASURE OF RESILIENCE

    Science.gov (United States)

    The textural discontinuity hypothesis (TDH) is based on the observation that animal body mass distributions exhibit discontinuities that may reflect the texture of the landscape available for exploitation. This idea has been extended to other complex systems, hinting that the ide...

  14. DISCONTINUOUS FINITE ELEMENT METHOD FOR CONVECTION-DIFFUSION EQUATIONS

    Institute of Scientific and Technical Information of China (English)

    Abdellatif Agouzal

    2000-01-01

    A discontinuous finite element method for convection-diffusion equations is proposed and analyzed. This scheme is designed to produce an approximate solution which is completely discontinuous. Optimal order of convergence is obtained for model problem. This is the same convergence rate known for the classical methods.

  15. 19 CFR 142.25 - Discontinuance of immediate delivery privileges.

    Science.gov (United States)

    2010-04-01

    ... SECURITY; DEPARTMENT OF THE TREASURY (CONTINUED) ENTRY PROCESS Special Permit for Immediate Delivery § 142.25 Discontinuance of immediate delivery privileges. (a) Authority of port director. The port director... 19 Customs Duties 2 2010-04-01 2010-04-01 false Discontinuance of immediate delivery privileges...

  16. Contraceptive discontinuation and unintended pregnancy: an imperfect relationship.

    Science.gov (United States)

    Curtis, Siân; Evens, Emily; Sambisa, William

    2011-06-01

    Contraceptive discontinuation is a common event that may be associated with low motivation to avoid pregnancy. If this is the case, a substantial proportion of pregnancies that follow discontinuation will be reported as intended. Demographic and Health Survey data from six countries (Bangladesh, the Dominican Republic, Kazakhstan, Kenya, the Philippines and Zimbabwe) over the period 1999-2003 were used to explore the proportions of pregnancies women reported as intended or unintended following various contraceptive behaviors. Multivariate logistic regression analysis was used to examine the characteristics of women who reported births as intended when they followed contraceptive failure or discontinuation for reasons other than a desire for pregnancy. The proportion of births reported as intended following contraceptive failure ranged from 16% in Bangladesh to 54% in Kazakhstan, and the proportion reported as intended following discontinuation for reasons other than a desire for pregnancy ranged from 37% in Kenya to 51% in Kazakhstan. In at least half the countries, associations were found between selected women's characteristics and their reports that births following either contraceptive failure or discontinuation were intended: Factors that were positively associated were women's age and the time elapsed between contraceptive discontinuation and the index conception; factors that were negatively associated were increasing number of living children and reporting method failure as opposed to method discontinuation. These findings suggest that underlying variation in the motivation to avoid pregnancy is an important factor in contraceptive discontinuation.

  17. 27 CFR 20.68 - Notice of permanent discontinuance.

    Science.gov (United States)

    2010-04-01

    ... 27 Alcohol, Tobacco Products and Firearms 1 2010-04-01 2010-04-01 false Notice of permanent discontinuance. 20.68 Section 20.68 Alcohol, Tobacco Products and Firearms ALCOHOL AND TOBACCO TAX AND TRADE... Qualification of Dealers and Users Permanent Discontinuance of Business § 20.68 Notice of...

  18. 14 CFR Section 16 - Objective Classification-Discontinued Operations

    Science.gov (United States)

    2010-01-01

    ... 14 Aeronautics and Space 4 2010-01-01 2010-01-01 false Objective Classification-Discontinued... AIR CARRIERS Profit and Loss Classification Section 16 Objective Classification—Discontinued... the disposal of investor controlled companies and nontransport ventures whether sold, abandoned,...

  19. Gedanken Densities and Exact Constraints in Density Functional Theory

    CERN Document Server

    Perdew, John P; Sun, Jianwei; Burke, Kieron

    2014-01-01

    Approximations to the exact density functional for the exchange-correlation energy of a many-electron ground state can be constructed by satisfying constraints that are universal, i.e., valid for all electron densities. Gedanken densities are designed for the purpose of this construction, but need not be realistic. The uniform electron gas is an old gedanken density. Here, we propose a spherical two-electron gedanken density in which the dimensionless density gradient can be an arbitrary positive constant wherever the density is non-zero. The Lieb-Oxford lower bound on the exchange energy can be satisfied within a generalized gradient approximation (GGA) by bounding its enhancement factor or simplest GGA exchange-energy density. This enhancement-factor bound is well known to be sufficient, but our gedanken density shows that it is also necessary. The conventional exact exchange-energy density satisfies no such local bound, but energy densities are not unique, and the simplest GGA exchange-energy density is no...

  20. Numerical Dissipation and Wrong Propagation Speed of Discontinuities for Stiff Source Terms

    Science.gov (United States)

    Yee, H. C.; Kotov, D. V.; Sjoegreen, B.

    2012-01-01

    In compressible turbulent combustion/nonequilibrium flows, the constructions of numerical schemes for (a) stable and accurate simulation of turbulence with strong shocks, and (b) obtaining correct propagation speed of discontinuities for stiff reacting terms on coarse grids share one important ingredient - minimization of numerical dissipation while maintaining numerical stability. Here coarse grids means standard mesh density requirement for accurate simulation of typical non-reacting flows. This dual requirement to achieve both numerical stability and accuracy with zero or minimal use of numerical dissipation is most often conflicting for existing schemes that were designed for non-reacting flows. The goal of this paper is to relate numerical dissipations that are inherited in a selected set of high order shock-capturing schemes with the onset of wrong propagation speed of discontinuities as a function of stiffness of the source term and the grid spacing.

  1. Discontinuous Electromagnetic Fields Using Huygens Sources For Wavefront Manipulation

    CERN Document Server

    Selvanayagam, Michael

    2013-01-01

    We introduce the idea of discontinuous electric and magnetic fields at a boundary to design and shape wavefronts in an arbitrary manner. To create this discontinuity in the field we use electric and magnetic currents which act like a Huygens source to radiate the desired wavefront. These currents can be synthesized either by an array of electric and magnetic dipoles or by a combined impedance and admittance surface. A dipole array is an active implementation to impose discontinuous fields while the impedance/admittance surface acts as a passive one. We then expand on our previous work showing how electric and magnetic dipole arrays can be used to cloak an object demonstrating two novel cloaking schemes. We also show how to arbitrarily refract a beam using a set of impedance and admittance surfaces. Refraction using the idea of discontinuous fields is shown to be a more general case of refraction using phase discontinuities.

  2. Modelling discontinuities and Kelvin-Helmholtz instabilities in SPH

    CERN Document Server

    Price, Daniel J

    2007-01-01

    In this paper we discuss the treatment of discontinuities in Smoothed Particle Hydrodynamics (SPH) simulations. In particular we discuss the difference between integral and differential representations of the fluid equations in an SPH context and how this relates to the formulation of dissipative terms for the capture of shocks and other discontinuities. This has important implications for many problems, in particular related to recently highlighted problems related to treating Kelvin-Helmholtz instabilities across contact discontinuities in SPH. We highlight in this paper that the ``fundamental differences'' between SPH and grid based methods suggested by Agertz et al. (2007) are actually more like ``fundamental similarities'' relating to the fact that both types of method require an appropriate treatment of all flow discontinuities. The specific problems pointed out by Agertz et al. are shown to be related in particular to the treatment of contact discontinuities in SPH which can be cured by the simple appl...

  3. Preparation and characterization of chemical gradient surfaces and their application for the study of cellular interaction phenomena

    NARCIS (Netherlands)

    Ruardy, TG; Schakenraad, JM; vanderMei, HC; Busscher, HJ

    1997-01-01

    Chemical gradient surfaces are surfaces with a gradually changing chemistry along their length which is responsible for a position bound variation in physical properties, most notably, the wettability. In this review, methods to prepare (palladium deposition, diffusion technique, density gradient

  4. Polar constellations design for discontinuous coverage

    Science.gov (United States)

    Sarno, Salvatore; Graziano, Maria Daniela; D'Errico, Marco

    2016-10-01

    A novel constellation design method is developed for discontinuous coverage of the globe and polar caps. It integrates and extends the applicability of the coverage regions and mitigates the limitations of the existing techniques based on streets-of-coverage (SOC) theory. In particular, the visibility conditions of the targets are mapped in the (Ω, u)-domain to identify the number of satellites per plane and the distance between successive orbits, whereas the planes are arranged around the equator exploiting satellites both in ascending and descending phase. The proposed approach is applied to design potential space segments in polar LEO supporting the existing maritime surveillance services over the globe and on the future polar routes. Results show they require a smaller total number of satellites with respect to the SOC-based configurations for revisit times less than one hour and wide range of swaths. In details, it is observed a reduction between 6% and 22% for global coverage and between 24% and 33% for the coverage of polar caps.

  5. A conservative discontinuous target volatility strategy

    Directory of Open Access Journals (Sweden)

    Simone Cirelli

    2017-07-01

    Full Text Available The asset management sector is constantly looking for a reliable investment strategy, which is able to keep its promises. One of the most used approaches is the target volatility strategy that combines a risky asset with a risk-free trying to maintain the portfolio volatility constant over time. Several analyses highlight that such target is fulfilled on average, but in periods of crisis, the portfolio still suffers market’s turmoils. In this paper, the authors introduce an innovative target volatility strategy: the discontinuous target volatility. Such approach turns out to be more conservative in high volatility periods. Moreover, the authors compare the adoption of the VIX Index as a risk measure instead of the classical standard deviation and show whether the former is better than the latter. In the last section, the authors also extend the analysis to remove the risk-free assumption and to include the correlation structure between two risky assets. Empirical results on a wide time span show the capability of the new proposed strategy to enhance the portfolio performance in terms of standard measures and according to stochastic dominance theory.

  6. Capillary surface discontinuities above reentrant corners

    Science.gov (United States)

    Korevaar, H. J.

    1982-01-01

    A particular configuration of a vertical capillary tube for which S is the equilibrium interface between two fluids in the presence of a downward pointing gravitational field was investigated. S is the graph a function u whose domain is the (horizontal) cross section gamma of the tube. The mean curvature of S is proportional to its height above a fixed reference plane and lambda is a prescribed constant and may be taken between zero and pi/2. Domains gamma for which us is a bounded function but does not extend continuously to d gamma are sought. Simple domains are found and the behavior of u in those domains is studied. An important comparison principle that has been used in the literature to derive many of the results in capillarity is reviewed. It allows one to deduce the approximate shape of a capillary surface by constructing comparison surfaces with mean curvature and contact angle close to those of the (unknown) solution surface. In the context of nonparametric problems the comparison principle leads to height estimates above and below for the function u. An example from the literature where these height estimates have been used successfully is described. The promised domains for which the bounded u does not extend continuously to the boundary are constructed. The point on the boundary at which u has a jump discontinuity will be the vertext of a re-entrant corner having any interior angle theta pi. Using the comparison principle the behavior of u near this point is studied.

  7. Dynamics of Discontinuous Shear Thickening suspensions

    Science.gov (United States)

    Brown, Eric

    2015-03-01

    Concentrated suspensions of hard particles such as cornstarch in water exhibit Discontinuous Shear Thickening, in which an increasing shear rate drives a transition from liquid- to solid-like mechanical behavior. In steady-state shear this phenomena is a result of a dynamic version of jamming in which forces are transmitted along particle contact networks that span to system boundaries and repeatedly form and break up. Several dynamic phenomena observed in such suspensions have long been assumed to be a consequence of this shear thickening, but cannot be explained as a direct result of shear thickening; for example a uniquely strong impact response which allows a person to run on the fluid surface. We perform experiments in which a concentrated suspension is subjected to transient impact. We find that the strong impact response is due a short-lived jammed contact network spanning to the boundaries and a delay time required for this dynamically jammed region to propagate to the boundary. The resulting ability of this system-spanning solid-like region to support loads can explain the ability of a person to run on the surface of these fluids. This delay before a solid-like response may also explain several other dynamic phenomena observed in these fluids.

  8. Airborne electromagnetic imaging of discontinuous permafrost

    Science.gov (United States)

    Minsley, Burke J.; Abraham, Jared D.; Smith, Bruce D.; Cannia, James C.; Voss, Clifford I.; Jorgenson, M. Torre; Walvoord, Michelle A.; Wylie, Bruce K.; Anderson, Lesleigh; Ball, Lyndsay B.; Deszcz-Pan, Maryla; Wellman, Tristan P.; Ager, Thomas A.

    2012-01-01

    The evolution of permafrost in cold regions is inextricably connected to hydrogeologic processes, climate, and ecosystems. Permafrost thawing has been linked to changes in wetland and lake areas, alteration of the groundwater contribution to streamflow, carbon release, and increased fire frequency. But detailed knowledge about the dynamic state of permafrost in relation to surface and groundwater systems remains an enigma. Here, we present the results of a pioneering ˜1,800 line-kilometer airborne electromagnetic survey that shows sediments deposited over the past ˜4 million years and the configuration of permafrost to depths of ˜100 meters in the Yukon Flats area near Fort Yukon, Alaska. The Yukon Flats is near the boundary between continuous permafrost to the north and discontinuous permafrost to the south, making it an important location for examining permafrost dynamics. Our results not only provide a detailed snapshot of the present-day configuration of permafrost, but they also expose previously unseen details about potential surface - groundwater connections and the thermal legacy of surface water features that has been recorded in the permafrost over the past ˜1,000 years. This work will be a critical baseline for future permafrost studies aimed at exploring the connections between hydrogeologic, climatic, and ecological processes, and has significant implications for the stewardship of Arctic environments.

  9. Toughening mechanisms in discontinuous glass/polypropylene composites

    Science.gov (United States)

    Williams, Eunethia Denise

    1997-08-01

    There are five energy absorbing mechanisms for discontinuous fiber reinforced composites. These include fiber debonding, fiber pullout/bridging, fiber breakage, matrix cracking and matrix deformation. Because of the typically random orientation of fibers in these systems, it has been difficult to develop an experimental approach to determine which of these contributions dominate the measured in-plane toughness values. To address this issue, a specimen has been developed of one pultruded sheet of polypropylene-glass longitudinally centered in a compression molded polypropylene bar. Experimentally, interface strength was varied from weak to intermediate to strong adhesion through the addition of different sizings and maleic anhydride grafted polypropylene. The pullout contribution was determined through varying fiber length. Matrix contributions were determined by changing the molecular weight of the matrix and by changing the crystal structure from predominantly the alpha form to the beta form. Experiments of Izod testing have shown that impact strength is maximized in specimens with a weak interface at an optimum fiber length corresponding to the fiber length at which pullout predominates. In specimens with an intermediate strength interface, impact strength showed a maximum but was reduced. In specimens with a strong interface, impact strength was the lowest and fairly level. Experiments of tensile testing also showed maximum toughness in specimens with a weak interface with an optimum fiber length where pull out predominates. In specimens with a strong interface, tensile toughness was reduced. Examination of these specimens suggests that the impact strength is maximized by the density via the crystallinity of the resin. The density influences the volume contraction of the matrix around the fibers during cooling. This volume contraction creates a radial stress on the fibers that affects the frictional shear stress against which the fibers are pulled out during

  10. Formation of density singularities in ideal hydrodynamics of freely cooling inelastic gases: A family of exact solutions

    Science.gov (United States)

    Fouxon, Itzhak; Meerson, Baruch; Assaf, Michael; Livne, Eli

    2007-09-01

    We employ granular hydrodynamics to investigate a paradigmatic problem of clustering of particles in a freely cooling dilute granular gas. We consider large-scale hydrodynamic motions where the viscosity and heat conduction can be neglected, and one arrives at the equations of ideal gas dynamics with an additional term describing bulk energy losses due to inelastic collisions. We employ Lagrangian coordinates and derive a broad family of exact nonstationary analytical solutions that depend only on one spatial coordinate. These solutions exhibit a new type of singularity, where the gas density blows up in a finite time when starting from smooth initial conditions. The density blowups signal formation of close-packed clusters of particles. As the density blow-up time tc is approached, the maximum density exhibits a power law ˜(tc-t)-2. The velocity gradient blows up as ˜-(tc-t)-1 while the velocity itself remains continuous and develops a cusp (rather than a shock discontinuity) at the singularity. The gas temperature vanishes at the singularity, and the singularity follows the isobaric scenario: the gas pressure remains finite and approximately uniform in space and constant in time close to the singularity. An additional exact solution shows that the density blowup, of the same type, may coexist with an "ordinary" shock, at which the hydrodynamic fields are discontinuous but finite. We confirm stability of the exact solutions with respect to small one-dimensional perturbations by solving the ideal hydrodynamic equations numerically. Furthermore, numerical solutions show that the local features of the density blowup hold universally, independently of details of the initial and boundary conditions.

  11. Upper mantle discontinuity beneath the SW-Iberia peninsula: A multidisciplinary view.

    Science.gov (United States)

    Palomeras, Imma; de Lis Mancilla, Flor; Ayarza, Puy; Afonso, Juan Carlos; Diaz, Jordi; Morales, Jose; Carbonell, Ramon; Topoiberia Working Group

    2010-05-01

    Evidence for an upper mantle discontinuity located between 60 and 70 km depth have been provided by different seismic data sets acquired in the Southern Iberian peninsula. First indications of such a discontinuity were obtained by the very long offsets seismic refraction shot gathers acquired within the DSS ILIHA project in the early 90's. Clear seismic events recoded by the dense wide-angle seismic reflection shot gathers of the IBERSEIS experiment (2003) provided further constraints on the depth of the discontinuity and first-order estimates of its physical properties beneath the Ossa Morena Zone. Furthermore, the normal incidence Vibroseis deep seismic reflection images of the ALCUDIA transect (2007) extends this structure to the northeast beneath the Central Iberian Zone. This transect images deep laterally discontinuous reflections at upper mantle travel times (19 s) that roughly correspond to depths within the range of 60-70 km. Receiver function studies of the passive seismic recordings acquired by the IBERARRAY (TOPOIBERIA projects) provides additional support for the existence of this upper mantle structure and suggests that this is a relatively large scale regional feature. Two major scenarios need to be addressed when discussing the origin and nature of this deep structure. One is the tectonic scenario in which the structure maybe be related to a major tectonic event such as an old subduction process and therefore represent an ancient slab. A second hypothesis, would relate this feature to a phase change in the mantle. This latter assumption requires this feature ought to be a broader scale boundary which could be identified by different seismic techniques. Reflectivity modeling carried out over the IBERSEIS wide angle reflection data concludes that the observed phase is consistent with an heterogeneous gradient zone located at, approximately, 61-72 km depth. A layered structure with alternating velocities within ranges 8.1 to 8.3 km/s is necessary in

  12. 密度梯度分离/免疫荧光技术检测再生水中隐孢子虫和贾第鞭毛虫%Detection of Cryptosporidium and Giardia in reclaimed wastewater systems using immunofluorescence assay and density gradient separation

    Institute of Scientific and Technical Information of China (English)

    陈智敏; 张昱; 杨敏; 肖淑敏; 张冬青; 李红岩; 郭瑞光

    2011-01-01

    采用乙酸乙酯漂浮方法和酸溶解法分别解决了再生水进水中有机杂质以及再生水中剩余絮凝剂干扰隐孢子虫和贾第鞭毛虫检测的关键问题,在此基础上,建立了成本远低于EPA 1623法的隐孢子虫和贾第鞭毛虫检测方法的密度梯度分离/免疫荧光技术.利用该方法对我国北方2个城市的污水再生处理系统进行了检测,再生水进出水的回收率分别为18%~31%卵囊和24%~95%包囊,能够满足检测要求.结果表明,在5个再生水系统的9个进水样品中,隐孢子虫的阳性率为89%,平均浓度为26个/10 L;贾第鞭毛虫的阳性率为100%,平均浓度为138个/10 L.再生水出水中也有两虫检出.%For the reclaimed influents and the reclaimed effluents with excess coagulant, the ethyl acetate floatation and acid dissociation were suggested to be added to enhance the purification and increase the recovery,respectively. Then an immunofluorescence assay and density gradient separation method for detection of Cryptosporidium oocysts and Giardia cysts, was developed in reclaimed wastewater systems. The Cryptosporidium oocysts and Giardia cysts of reclaimed wastewaters were detected in T and B cities in north China using immunofluorescence assay and density gradient separation method. The acceptable recoveries obtained from reclaimed influents and effluents were in the range of 18%~31% oocysts and 24% ~95% cysts. The results showed that Cryptosporidium were detected in 89% samples with mean concentration of 26 oocysts/10 L,while Giardia were detected in 100% samples with mean concentration of 138 cysts/10 L in the influents of 5 reclaimed wastewater systems. Besides, Cryptosporidium oocysts and Giardia cysts were also present in the effluents of some reclaimed wastewater systems.

  13. Predictors of premature discontinuation of treatment in multiple disease states

    Directory of Open Access Journals (Sweden)

    Eric Nantz

    2009-01-01

    Full Text Available Eric Nantz1, Hong Liu-Seifert2, Vladimir Skljarevski21Department of Statistics, Western Michigan University, Kalamazoo, MI, USA; 2Lilly Research Laboratories, Eli Lilly and Company, Indianapolis, IN, USABackground: Premature discontinuation of treatment impacts outcomes of clinical practice. The traditional perception has been patient discontinuation is mainly driven by unwanted side effects. Systematic analysis of data from clinical trials across several disease states was performed to identify predictors of premature discontinuation during clinical interventions.Methods: A post hoc analysis was conducted on 22 randomized, double-blind, placebo-controlled clinical trials for treatment of fibromyalgia, diabetic peripheral neuropathic pain, major depressive disorder, and generalized anxiety disorder. Analyses were conducted on pooled data within each disease state.Results: Lack of early therapeutic response was a significant predictor of patient discontinuation in each disease state. Visit-wise changes in therapeutic response and severity of adverse events were also significant risk factors, with change in therapeutic response having a higher significance level in three disease states. Patients who discontinued due to adverse events had similar therapeutic responses as patients completing treatment.Conclusion: Contrary to the conventional belief that premature treatment discontinuation is primarily related to adverse events, our findings suggest lack of therapeutic response also plays a significant role in patient attrition. This research highlights the importance of systematic monitoring of therapeutic response in clinical practice as a measure to prevent patients’ discontinuation from pharmacological treatments.Keywords: attrition, depression, generalized anxiety disorder, fibromyalgia, therapeutic response, adverse event

  14. Adaptive Finite Element Methods for Elliptic Problems with Discontinuous Coefficients

    KAUST Repository

    Bonito, Andrea

    2013-01-01

    Elliptic PDEs with discontinuous diffusion coefficients occur in application domains such as diffusions through porous media, electromagnetic field propagation on heterogeneous media, and diffusion processes on rough surfaces. The standard approach to numerically treating such problems using finite element methods is to assume that the discontinuities lie on the boundaries of the cells in the initial triangulation. However, this does not match applications where discontinuities occur on curves, surfaces, or manifolds, and could even be unknown beforehand. One of the obstacles to treating such discontinuity problems is that the usual perturbation theory for elliptic PDEs assumes bounds for the distortion of the coefficients in the L∞ norm and this in turn requires that the discontinuities are matched exactly when the coefficients are approximated. We present a new approach based on distortion of the coefficients in an Lq norm with q < ∞ which therefore does not require the exact matching of the discontinuities. We then use this new distortion theory to formulate new adaptive finite element methods (AFEMs) for such discontinuity problems. We show that such AFEMs are optimal in the sense of distortion versus number of computations, and report insightful numerical results supporting our analysis. © 2013 Societ y for Industrial and Applied Mathematics.

  15. Outcomes of patients with chronic lymphocytic leukemia after discontinuing ibrutinib.

    Science.gov (United States)

    Jain, Preetesh; Keating, Michael; Wierda, William; Estrov, Zeev; Ferrajoli, Alessandra; Jain, Nitin; George, Binsah; James, Danelle; Kantarjian, Hagop; Burger, Jan; O'Brien, Susan

    2015-03-26

    Ibrutinib is a Bruton tyrosine kinase inhibitor approved for the treatment of patients with relapsed refractory chronic lymphocytic leukemia (RR-CLL). We describe the characteristics, causes of discontinuation, and outcomes in patients who discontinued treatment with ibrutinib. One hundred twenty-seven patients were enrolled in various clinical trials of ibrutinib, with or without rituximab, at our center. Thirty-three (26%) patients have discontinued ibrutinib to date. The majority of those patients had high-risk features: 94% with unmutated immunoglobulin heavy chain variable gene rearrangement, 58% with del(17p) by fluorescence in situ hybridization, and 54% with a complex karyotype. Causes of discontinuation were disease transformation (7), progressive CLL (7), stem cell transplantation (3), adverse events (11), serious adverse events/deaths (3), and miscellaneous reasons (2). Twenty five patients (76%) died after discontinuing ibrutinib; the median overall survival was 3.1 months after discontinuation. Most patients with RR-CLL who discontinued ibrutinib early were difficult to treat and had poor outcomes.

  16. Generalized conjugate gradient squared

    Energy Technology Data Exchange (ETDEWEB)

    Fokkema, D.R.; Sleijpen, G.L.G. [Utrecht Univ. (Netherlands)

    1994-12-31

    In order to solve non-symmetric linear systems of equations, the Conjugate Gradient Squared (CGS) is a well-known and widely used iterative method. In practice the method converges fast, often twice as fast as the Bi-Conjugate Gradient method. This is what you may expect, since CGS uses the square of the BiCG polynomial. However, CGS may suffer from its erratic convergence behavior. The method may diverge or the approximate solution may be inaccurate. BiCGSTAB uses the BiCG polynomial and a product of linear factors in an attempt to smoothen the convergence. In many cases, this has proven to be very effective. Unfortunately, the convergence of BiCGSTAB may stall when a linear factor (nearly) degenerates. BiCGstab({ell}) is designed to overcome this degeneration of linear factors. It generalizes BiCGSTAB and uses both the BiCG polynomial and a product of higher order factors. Still, CGS may converge faster than BiCGSTAB or BiCGstab({ell}). So instead of using a product of linear or higher order factors, it may be worthwhile to look for other polynomials. Since the BiCG polynomial is based on a three term recursion, a natural choice would be a polynomial based on another three term recursion. Possibly, a suitable choice of recursion coefficients would result in method that converges faster or as fast as CGS, but less erratic. It turns out that an algorithm for such a method can easily be formulated. One particular choice for the recursion coefficients leads to CGS. Therefore one could call this algorithm generalized CGS. Another choice for the recursion coefficients leads to BiCGSTAB. It is therefore possible to mix linear factors and some polynomial based on a three term recursion. This way one may get the best of both worlds. The authors will report on their findings.

  17. Risk of discontinuation of Advanced Therapy Medicinal Products clinical trials.

    Science.gov (United States)

    Hanna, Eve; Rémuzat, Cecile; Auquier, Pascal; Toumi, Mondher

    2016-01-01

    Advanced therapy medicinal products (ATMPs) constitute a class of innovative products that encompasses gene therapy, somatic cell therapy, and tissue-engineered products (TEP). There is an increased investment of commercial and non-commercial sponsors in this field and a growing number of ATMPs randomized clinical trials (RCT) and patients enrolled in such trials. RCT generate data to prove the efficacy of a new therapy, but the discontinuation of RCTs wastes scarce resources. Our objective is to identify the number and characteristics of discontinued ATMPs trials in order to evaluate the rate of discontinuation. We searched for ATMPs trials conducted between 1999 to June 2015 using three databases, which are Clinicaltrials.gov, the International Clinical Trials Registry Platform (ICTRP), and the EU Drug Regulating Authorities Clinical Trials (EudraCT). We selected the ATMPs trials after elimination of the duplicates. We identified the disease areas and the sponsors as commercial or non-commercial organizations. We classified ATMPs by type and trial status, that is, ongoing, completed, terminated, discontinued, and prematurely ended. Then, we calculated the rate of discontinuation. Between 1999 and June 2015, 143 withdrawn, terminated, or prematurely ended ATMPs clinical trials were identified. Between 1999 and June 2013, 474 ongoing and completed clinical trials were identified. Therefore, the rate of discontinuation of ATMPs trials is 23.18%, similar to that for non-ATMPs drugs in development. The probability of discontinuation is, respectively, 27.35, 16.28, and 16.34% for cell therapies, gene therapies, and TEP. The highest discontinuation rate is for oncology (43%), followed by cardiology (19.2%). It is almost the same for commercial and non-commercial sponsors; therefore, the discontinuation reason may not be financially driven. No failure risk rate per development phase is available for ATMPs. The discontinuation rate may prove helpful when assessing the

  18. Coupling impedances of small discontinuities: A general approach

    Science.gov (United States)

    Kurennoy, Sergey S.; Gluckstern, Robert L.; Stupakov, Gennady V.

    1995-10-01

    A general theory of the beam interaction with small discontinuities of the vacuum chamber of an accelerator is developed taking into account the reaction of radiated waves back on the discontinuity. The reactive impedance calculated earlier is reproduced as the first order and the resistive one as the second order of a perturbation theory based on this general approach. The theory also gives, in an easy and natural way, the analytical results for the frequencies and coupling impedances of the trapped modes due to small discontinuities on the vacuum chamber of a general cross section. Formulas for two important particular cases-a circular and a rectangular chamber-are presented.

  19. Coupling impedances of small discontinuities: A general approach

    Energy Technology Data Exchange (ETDEWEB)

    Kurennoy, S.S.; Gluckstern, R.L. [Physics Department, University of Maryland, College Park, Maryland 20742 (United States); Stupakov, G.V. [Stanford Linear Accelerator Center, Stanford, California 94309 (United States)

    1995-10-01

    A general theory of the beam interaction with small discontinuities of the vacuum chamber of an accelerator is developed taking into account the reaction of radiated waves back on the discontinuity. The reactive impedance calculated earlier is reproduced as the first order and the resistive one as the second order of a perturbation theory based on this general approach. The theory also gives, in an easy and natural way, the analytical results for the frequencies and coupling impedances of the trapped modes due to small discontinuities on the vacuum chamber of a general cross section. Formulas for two important particular cases---a circular and a rectangular chamber---are presented.

  20. Formation of density singularities in hydrodynamics of freely cooling inelastic gases: a family of exact solutions

    CERN Document Server

    Fouxon, Itzhak; Assaf, Michael; Livne, Eli

    2007-01-01

    We employ granular hydrodynamics to investigate a paradigmatic problem of clustering of particles in a freely cooling dilute granular gas. We consider large-scale hydrodynamic motions where the viscosity and heat conduction can be neglected, and one arrives at the equations of ideal gas dynamics with an additional term describing bulk energy losses due to inelastic collisions. We employ Lagrangian coordinates and derive a broad family of exact non-stationary analytical solutions that depend only on one spatial coordinate. These solutions exhibit a new type of singularity, where the gas density blows up in a finite time when starting from smooth initial conditions. The density blowups signal formation of close-packed clusters of particles. As the density blow-up time $t_c$ is approached, the maximum density exhibits a power law $\\sim (t_c-t)^{-2}$. The velocity gradient blows up as $\\sim - (t_c-t)^{-1}$ while the velocity itself remains continuous and develops a cusp (rather than a shock discontinuity) at the ...

  1. Gram-scale fractionation of nanodiamonds by density gradient ultracentrifugation.

    Science.gov (United States)

    Peng, Wei; Mahfouz, Remi; Pan, Jun; Hou, Yuanfang; Beaujuge, Pierre M; Bakr, Osman M

    2013-06-07

    Size is a defining characteristic of nanoparticles; it influences their optical and electronic properties as well as their interactions with molecules and macromolecules. Producing nanoparticles with narrow size distributions remains one of the main challenges to their utilization. At this time, the number of practical approaches to optimize the size distribution of nanoparticles in many interesting materials systems, including diamond nanocrystals, remains limited. Diamond nanocrystals synthesized by detonation protocols - so-called detonation nanodiamonds (DNDs) - are promising systems for drug delivery, photonics, and composites. DNDs are composed of primary particles with diameters mainly Applications requiring DNDs with specific particle or aggregate sizes are now within reach.

  2. Axon guidance of rat cortical neurons by microcontact printed gradients.

    Science.gov (United States)

    Fricke, Rita; Zentis, Peter D; Rajappa, Lionel T; Hofmann, Boris; Banzet, Marko; Offenhäusser, Andreas; Meffert, Simone H

    2011-03-01

    Substrate-bound gradients expressed in numerous spatio-temporal patterns play a crucial role during the development of complex neural circuits. A deeper understanding of the axon guidance mechanism is provided by studying the effect of a defined substrate-bound cue on a confined neural network. In this study, we constructed a discontinuous substrate-bound gradient to control neuronal cell position, the path of neurite growth, and axon directionality. A variety of gradient patterns, with slight changes in slope, width, and length were designed and fabricated by microcontact printing using laminin/poly-l-lysine (PLL) or PLL alone. The gradients were tested for neurite growth and their impact on axon guidance of embryonic rat cortical neurons. The neurite length was determined and the axon was evaluated by Tau-1 immunostaining. We found that the microgradients of laminin/PLL and PLL directed neurons' adhesion, differentially controlled the neurite growth, and guided up to 84% of the axons. The effect of the protein micropattern on axon guidance and neurite growth depended on the protein and geometric parameters used. Our approach proved to be very successful in guiding axons of single multipolar neurons with very high efficiency. It could thereby be useful to engineer defined neural networks for analyzing signal processing of functional circuits, as well as to unravel fundamental questions of the axon guidance mechanism.

  3. Ab initio study of heterojunction discontinuities in the ZnO/Cu2O system

    Science.gov (United States)

    Zemzemi, M.; Alaya, S.; Ben Ayadi, Z.

    2014-06-01

    Solar cells based on transparent conductive oxides such as ZnO/Cu2O constitute a very advanced way to build high-performance cells. In this work, we are interested in the characterization of the interface through nanoscale modeling based on ab initio approaches (density functional theory, local density approximation, and pseudopotential). This work aims to build a supercell containing a heterojunction ZnO/Cu2O and study the structural properties and the discontinuity of the valence band (band offset) from a semiconducting to another phase. We build a zinc oxide in the wurtzite structure along [0001] on which we place the copper oxide in the hexagonal (CdI2-type) structure. We choose the method of Van de Walle and Martin to calculate the energy offset. This approach fits well the density functional theory. Our calculation of the band offset gives a value that corresponds to other experimental and theoretical values.

  4. Discontinuity of mode transition and hysteresis in hydrogen inductively coupled plasma via a fluid model

    Institute of Scientific and Technical Information of China (English)

    徐会静; 赵书霞; 高飞; 张钰如; 李雪春; 王友年

    2015-01-01

    A new type of two-dimensional self-consistent fluid model that couples an equivalent circuit module is used to in-vestigate the mode transition characteristics and hysteresis in hydrogen inductively coupled plasmas at different pressures, by varying the series capacitance of the matching box. The variations of the electron density, temperature, and the cir-cuit electrical properties are presented. As cycling the matching capacitance, at high pressure both the discontinuity and hysteresis appear for the plasma parameters and the transferred impedances of both the inductive and capacitive discharge components, while at low pressure only the discontinuity is seen. The simulations predict that the sheath plays a determi-native role on the presence of discontinuity and hysteresis at high pressure, by influencing the inductive coupling efficiency of applied power. Moreover, the values of the plasma transferred impedances at different pressures are compared, and the larger plasma inductance at low pressure due to less collision frequency, as analyzed, is the reason why the hysteresis is not seen at low pressure, even with a wider sheath. Besides, the behaviors of the coil voltage and current parameters during the mode transitions are investigated. They both increase (decrease) at the E to H (H to E) mode transition, indicating an improved (worsened) inductive power coupling efficiency.

  5. An Iterative Phase-Space Explicit Discontinuous Galerkin Method for Stellar Radiative Transfer in Extended Atmospheres

    Energy Technology Data Exchange (ETDEWEB)

    de Almeida, V.F.

    2004-01-28

    A phase-space discontinuous Galerkin (PSDG) method is presented for the solution of stellar radiative transfer problems. It allows for greater adaptivity than competing methods without sacrificing generality. The method is extensively tested on a spherically symmetric, static, inverse-power-law scattering atmosphere. Results for different sizes of atmospheres and intensities of scattering agreed with asymptotic values. The exponentially decaying behavior of the radiative field in the diffusive-transparent transition region and the forward peaking behavior at the surface of extended atmospheres were accurately captured. The integrodifferential equation of radiation transfer is solved iteratively by alternating between the radiative pressure equation and the original equation with the integral term treated as an energy density source term. In each iteration, the equations are solved via an explicit, flux-conserving, discontinuous Galerkin method. Finite elements are ordered in wave fronts perpendicularly to the characteristic curves so that elemental linear algebraic systems are solved quickly by sweeping the phase space element by element. Two implementations of a diffusive boundary condition at the origin are demonstrated wherein the finite discontinuity in the radiative intensity is accurately captured by the proposed method. This allows for a consistent mechanism to preserve photon luminosity. The method was proved to be robust and fast, and a case is made for the adequacy of parallel processing. In addition to classical two-dimensional plots, results of normalized radiative intensity were mapped onto a log-polar surface exhibiting all distinguishing features of the problem studied.

  6. An iterative phase-space explicit discontinuous Galerkin method for stellar radiative transfer in extended atmospheres

    Science.gov (United States)

    de Almeida, Valmor F.

    2017-07-01

    A phase-space discontinuous Galerkin (PSDG) method is presented for the solution of stellar radiative transfer problems. It allows for greater adaptivity than competing methods without sacrificing generality. The method is extensively tested on a spherically symmetric, static, inverse-power-law scattering atmosphere. Results for different sizes of atmospheres and intensities of scattering agreed with asymptotic values. The exponentially decaying behavior of the radiative field in the diffusive-transparent transition region, and the forward peaking behavior at the surface of extended atmospheres were accurately captured. The integrodifferential equation of radiation transfer is solved iteratively by alternating between the radiative pressure equation and the original equation with the integral term treated as an energy density source term. In each iteration, the equations are solved via an explicit, flux-conserving, discontinuous Galerkin method. Finite elements are ordered in wave fronts perpendicular to the characteristic curves so that elemental linear algebraic systems are solved quickly by sweeping the phase space element by element. Two implementations of a diffusive boundary condition at the origin are demonstrated wherein the finite discontinuity in the radiation intensity is accurately captured by the proposed method. This allows for a consistent mechanism to preserve photon luminosity. The method was proved to be robust and fast, and a case is made for the adequacy of parallel processing. In addition to classical two-dimensional plots, results of normalized radiation intensity were mapped onto a log-polar surface exhibiting all distinguishing features of the problem studied.

  7. Discontinuity of mode transition and hysteresis in hydrogen inductively coupled plasma via a fluid model

    Science.gov (United States)

    Xu, Hui-Jing; Zhao, Shu-Xia; Fei, Gao; Yu-Ru, Zhang; Xue-Chun, Li; You-Nian, Wang

    2015-11-01

    A new type of two-dimensional self-consistent fluid model that couples an equivalent circuit module is used to investigate the mode transition characteristics and hysteresis in hydrogen inductively coupled plasmas at different pressures, by varying the series capacitance of the matching box. The variations of the electron density, temperature, and the circuit electrical properties are presented. As cycling the matching capacitance, at high pressure both the discontinuity and hysteresis appear for the plasma parameters and the transferred impedances of both the inductive and capacitive discharge components, while at low pressure only the discontinuity is seen. The simulations predict that the sheath plays a determinative role on the presence of discontinuity and hysteresis at high pressure, by influencing the inductive coupling efficiency of applied power. Moreover, the values of the plasma transferred impedances at different pressures are compared, and the larger plasma inductance at low pressure due to less collision frequency, as analyzed, is the reason why the hysteresis is not seen at low pressure, even with a wider sheath. Besides, the behaviors of the coil voltage and current parameters during the mode transitions are investigated. They both increase (decrease) at the E to H (H to E) mode transition, indicating an improved (worsened) inductive power coupling efficiency. Project supported by the National Natural Science Foundation of China (Grant Nos. 11175034, 11205025, 11305023, and 11075029).

  8. The relation of solar wind structure to hydromagnetic discontinuities

    Energy Technology Data Exchange (ETDEWEB)

    Alexander, C.J.; Neugebauer, M.; Smith, E.J.; Bame, S.J.

    1987-01-01

    High resolution ISEE-3 data have been used to examine the relative abundances of tangential (TD) vs rotational (RD) discontinuities in different types of solar wind flow. Three types of flow were examined; flow from coronal holes, sector boundary flow and transient flow. It has been found that coronal hole flow has substantially more discontinuities and a greater ratio of RD's to TD's than do the other types of flow. Discontinuities are least frequent in transient flows characterized by bidirectional streaming of electrons. This leads us to the conclusion that meaningful studies of the velocity dependence of the rates of occurrence of different types of discontinuities must take the type of flow (coronal hole versus transient) into account. 7 refs., 3 figs., 1 tab.

  9. UPWIND DISCONTINUOUS GALERKIN METHODS FOR TWO DIMENSIONAL NEUTRON TRANSPORT EQUATIONS

    Institute of Scientific and Technical Information of China (English)

    袁光伟; 沈智军; 闫伟

    2003-01-01

    In this paper the upwind discontinuous Galerkin methods with triangle meshes for two dimensional neutron transport equations will be studied.The stability for both of the semi-discrete and full-discrete method will be proved.

  10. Propagating plasma discontinuity in a tube immersed in distilled water

    Science.gov (United States)

    Song, Jian; Tang, Jingfeng; Wei, Liqiu; Zhang, Nan; Wang, Youyin; Yu, Daren

    2016-04-01

    In a dielectric tube partially surrounded by distilled water, a propagating discontinuity is observed in a cold argon plasma jet at atmospheric pressure in both the laminar and turbulent flow regimes. Through electrical and optical diagnostics, the mechanism of formation for this phenomenon is investigated. Results show that the strong polarization of the distilled water, the constraint from the electric field (or a sufficiently high electric field), and the transport of the active species are in combination responsible for the propagating plasma discontinuity. Indeed, smaller surface areas of the tube surrounded by distilled water, shorter distances between the distilled water and the ground electrodes, as well as larger gas flow rates can together make the discontinuous discharge channel appear more readily. In particular, when the flow switches from laminar to turbulent, the plasma behavior of the discontinuity no longer depends on the gas flow rate. This is mostly attributed to the extreme instability of turbulence which further suppresses the transport of active species.

  11. Minimizers with discontinuous velocities for the electromagnetic variational method

    CERN Document Server

    De Luca, Jayme

    2010-01-01

    The electromagnetic two-body problem has \\emph{neutral-delay} equations of motion that, for generic boundary data, can have solutions with \\emph{% discontinuous} derivatives. If one wants to use these neutral-delay equations with \\emph{arbitrary} boundary data, solutions with discontinuous derivatives must be expected and allowed. Surprisingly, the Wheeler-Feynman electrodynamics has a variational method with mixed-type boundary conditions for which minimizer trajectories with discontinuous derivatives are also expected, as we show here. The variational method defines continuous trajectories with piecewise-defined velocities and accelerations, with electromagnetic fields defined \\emph{by} the equations of motion \\emph{on} trajectory points. Here we use the piecewise-defined minimizers with the Li{% \\'{e}}nard-Wierchert formulas to define generalized electromagnetic fields almost everywhere (but on sets of points of zero measure where the advanced/retarded velocities and/or accelerations are discontinuous). Al...

  12. Necessary Conditions for Discontinuities of Multidimensional Size Functions

    CERN Document Server

    Cerri, Andrea

    2008-01-01

    Some new results about multidimensional topological persistence are presented, proving that the discontinuity points of a k-dimensional size function are necessarily related to the pseudocritical values of the associated measuring function.

  13. 47 CFR 80.471 - Discontinuance or impairment of service.

    Science.gov (United States)

    2010-10-01

    ... commercial mobile radio service providers, a public coast station must not discontinue or impair service unless authorized to do so by the Commission. Automated Systems ... Section 80.471 Telecommunication FEDERAL COMMUNICATIONS COMMISSION (CONTINUED) SAFETY AND SPECIAL...

  14. Calculation of Accurate Hexagonal Discontinuity Factors for PARCS

    Energy Technology Data Exchange (ETDEWEB)

    Pounders. J., Bandini, B. R. , Xu, Y, and Downar, T. J.

    2007-11-01

    In this study we derive a methodology for calculating discontinuity factors consistent with the Triangle-based Polynomial Expansion Nodal (TPEN) method implemented in PARCS for hexagonal reactor geometries. The accuracy of coarse-mesh nodal methods is greatly enhanced by permitting flux discontinuities at node boundaries, but the practice of calculating discontinuity factors from infinite-medium (zero-current) single bundle calculations may not be sufficiently accurate for more challenging problems in which there is a large amount of internodal neutron streaming. The authors therefore derive a TPEN-based method for calculating discontinuity factors that are exact with respect to generalized equivalence theory. The method is validated by reproducing the reference solution for a small hexagonal core.

  15. Actor Bonds in Situations of Discontinuous Business Activities

    DEFF Research Database (Denmark)

    Skaates, Maria Anne

    2000-01-01

    in situations of discontinuity. Therefore an analysis and comparison of relevant concepts that capture the key generative features of actor bonds in both socially constructed networks and socially constructed markets is undertaken. These concepts include the "milieu" of project marketing (Cova et al., 1996......Demand in many industrial buying situations, e.g. project purchases or procurement related to virtual organizations, is discontinuous. In situations of discontinuity, networks are often more of an ad hos informational and social nature, as strong activity and resource links are not present......) and the institutional concept of the "field". Finally this paper introduces the concept of "social capital" (Bourdieu, 1983) and discusses whether it can be used to conceptualize the dynamic features of actor bonds in situations of discontinuity....

  16. Kelvin-Helmholtz discontinuity in two superposed viscous conducting fluids in a horizontal magnetic field

    Directory of Open Access Journals (Sweden)

    Khan Aiyub

    2008-01-01

    Full Text Available The Kelvin-Helmholtz discontinuity in two superposed viscous conducting fluids has been investigated in the taking account of effects of surface tension, when the whole system is immersed in a uniform horizontal magnetic field. The streaming motion is assumed to be two-dimensional. The stability analysis has been carried out for two highly viscous fluid of uniform densities. The dispersion relation has been derived and solved numerically. It is found that the effect of viscosity, porosity and surface tension have stabilizing influence on the growth rate of the unstable mode, while streaming velocity has a destabilizing influence on the system.

  17. Solutions of the Wheeler-Feynman equations with discontinuous velocities

    OpenAIRE

    de Souza, Daniel Câmara; De Luca, Jayme

    2014-01-01

    We generalize Wheeler-Feynman electrodynamics with a variational boundary-value problem with past and future boundary segments that can include velocity discontinuity points. Critical-point trajectories must satisfy the Euler-Lagrange equations of the action functional, which are neutral-differential delay equations of motion (the Wheeler-Feynman equations of motion). At velocity discontinuity points, critical-point orbits must satisfy the Weierstrass-Erdmann conditions of continuity of parti...

  18. Modified Burgers' equation by the local discontinuous Galerkin method

    Institute of Scientific and Technical Information of China (English)

    Zhang Rong-Pei; Yu Xi-Jun; Zhao Guo-Zhong

    2013-01-01

    In this paper,we present the local discontinuous Galerkin method for solving Burgers' equation and the modified Burgers' equation.We describe the algorithm formulation and practical implementation of the local discontinuous Galerkin method in detail.The method is applied to the solution of the one-dimensional viscous Burgers' equation and two forms of the modified Burgers' equation.The numerical results indicate that the method is very accurate and efficient.

  19. Discontinued drug in 2007: renal, endocrine and metabolic drugs.

    Science.gov (United States)

    Colca, Jerry R

    2008-11-01

    This perspective is the first part of an annual series of papers discussing drugs dropped from clinical development in the previous year. Specifically, this paper focuses on the 14 renal, endocrine and metabolic drugs discontinued in 2007. The candidates covered in this summary were being developed for treatment of diabetes, obesity, reproductive and urogenital health issues, and growth hormone deficiency. Information for this perspective was derived from a search of the Pharmaprojects database for drugs discontinued after reaching Phase I - III clinical trials.

  20. Clopidogrel discontinuation after myocardial infarction and risk of thrombosis

    DEFF Research Database (Denmark)

    Charlot, Mette; Nielsen, Lars Hougaard; Lindhardsen, Jesper

    2012-01-01

    The benefit of extending clopidogrel treatment beyond the 12-month period recommended in current guidelines after myocardial infarction (MI) is debated. We analysed the risk of adverse cardiovascular outcomes after discontinuation of 12 months of clopidogrel treatment.......The benefit of extending clopidogrel treatment beyond the 12-month period recommended in current guidelines after myocardial infarction (MI) is debated. We analysed the risk of adverse cardiovascular outcomes after discontinuation of 12 months of clopidogrel treatment....

  1. Mid-lithosphere discontinuities beneath the western and central North China Craton

    Science.gov (United States)

    Sun, Weijia; Kennett, B. L. N.

    2017-02-01

    By analyzing P reflectivity extracted from stacked autocorrelograms for teleseismic events on a dense seismic profile, we obtain a detailed image of the mid-lithosphere discontinuity (MLD) beneath western and central North China Craton (NCC). This seismic daylight imaging exploits a broad high-frequency band (0.5-4 Hz) to reveal the fine-scale component of multi-scale lithospheric heterogeneity. The depth of the MLD beneath the western and central parts of the NCC ranges 80-120 km, with a good match to the transition to negative S velocity gradient with depth from Rayleigh wave tomography. The MLD inferred from seismic daylight imaging also has good correspondence with the transition from conductive to convective regimes estimated from heat flow data indicating likely thermal control within the seismological lithosphere.

  2. Damping of toroidal ion temperature gradient modes

    Energy Technology Data Exchange (ETDEWEB)

    Sugama, H. [National Inst. for Fusion Science, Toki, Gifu (Japan)

    1999-04-01

    The temporal evolution of linear toroidal ion temperature gradient (ITG) modes is studied based on a kinetic integral equation including an initial condition. It is shown how to evaluate the analytic continuation of the integral kernel as a function of a complex-valued frequency, which is useful for analytical and numerical calculations of the asymptotic damping behavior of the ITG mode. In the presence of the toroidal {nabla}B-curvature drift, the temporal dependence of the density and potential perturbations consists of normal modes and a continuum mode, which correspond to contributions from poles and from an integral along a branch cut, respectively, of the Laplace-transformed potential function of the complex-valued frequency. The normal modes have exponential time dependence with frequencies and growth rates determined by the dispersion relation while the continuum mode, which has a ballooning structure, shows a power law decay {proportional_to} t{sup -2} in the asymptotic limit, where t is the time variable. Therefore, the continuum mode dominantly describes the long-time asymptotic behavior of the density and potential perturbations for the stable system where all normal modes have negative growth rates. By performing proper analytic continuation for the homogeneous version of the kinetic integral equation, dependences of the normal modes` growth rate, real frequency, and eigenfunction on {eta}{sub i} (the ratio of the ion temperature gradient to the density gradient), k{sub {theta}} (the poloidal wavenumber), s (the magnetic shear parameter), and {theta}{sub k} (the ballooning angle corresponding to the minimum radial wavenumber) are numerically obtained for both stable and unstable cases. (author)

  3. A blended continuous-discontinuous finite element method for solving the multi-fluid plasma model

    Science.gov (United States)

    Sousa, E. M.; Shumlak, U.

    2016-12-01

    The multi-fluid plasma model represents electrons, multiple ion species, and multiple neutral species as separate fluids that interact through short-range collisions and long-range electromagnetic fields. The model spans a large range of temporal and spatial scales, which renders the model stiff and presents numerical challenges. To address the large range of timescales, a blended continuous and discontinuous Galerkin method is proposed, where the massive ion and neutral species are modeled using an explicit discontinuous Galerkin method while the electrons and electromagnetic fields are modeled using an implicit continuous Galerkin method. This approach is able to capture large-gradient ion and neutral physics like shock formation, while resolving high-frequency electron dynamics in a computationally efficient manner. The details of the Blended Finite Element Method (BFEM) are presented. The numerical method is benchmarked for accuracy and tested using two-fluid one-dimensional soliton problem and electromagnetic shock problem. The results are compared to conventional finite volume and finite element methods, and demonstrate that the BFEM is particularly effective in resolving physics in stiff problems involving realistic physical parameters, including realistic electron mass and speed of light. The benefit is illustrated by computing a three-fluid plasma application that demonstrates species separation in multi-component plasmas.

  4. A high order characteristic discontinuous Galerkin scheme for advection on unstructured meshes

    Science.gov (United States)

    Lee, D.; Lowrie, R.; Petersen, M.; Ringler, T.; Hecht, M.

    2016-11-01

    A new characteristic discontinuous Galerkin (CDG) advection scheme is presented. In contrast to standard discontinuous Galerkin schemes, the test functions themselves follow characteristics in order to ensure conservation and the edges of each element are also traced backwards along characteristics in order to create a swept region, which is integrated in order to determine the mass flux across the edge. Both the accuracy and performance of the scheme are greatly improved by the use of large Courant-Friedrichs-Lewy numbers for a shear flow test case and the scheme is shown to scale sublinearly with the number of tracers being advected, outperforming a standard flux corrected transport scheme for 10 or more tracers with a linear basis. Moreover the CDG scheme may be run to arbitrarily high order spatial accuracy and on unstructured grids, and is shown to give the correct order of error convergence for piecewise linear and quadratic bases on regular quadrilateral and hexahedral planar grids. Using a modal Taylor series basis, the scheme may be made monotone while preserving conservation with the use of a standard slope limiter, although this reduces the formal accuracy of the scheme to first order. The second order scheme is roughly as accurate as the incremental remap scheme with nonlocal gradient reconstruction at half the horizontal resolution. The scheme is being developed for implementation within the Model for Prediction Across Scales (MPAS) Ocean model, an unstructured grid finite volume ocean model.

  5. Possible responses of northern peatlands to climate change in the zone of discontinuous permafrost, Manitoba, Canada

    Energy Technology Data Exchange (ETDEWEB)

    Bubier, J.L. [New Hampshire Univ., Durham, NH (United States). Inst. for the Study of Earth, Oceans, and Space; Moore, T.R. [McGill Univ., Montreal (Canada). Geography Dept.

    1996-12-31

    More than half of the world`s peatlands occur in the boreal zone (45 - 60 deg C N. lat), a region which global climate models predict will experience large changes in temperature and precipitation with increasing atmospheric CO{sub 2} concentrations. The northern part of the boreal zone is characterised by discontinuous permafrost, an area that is particularly sensitive to climate change with the possible degradation and thawing of frozen peat. Peatlands are large sources of atmospheric methane (CH{sub 4}), an important greenhouse gas. Yet few measurements of methane have been conducted in discontinuous permafrost environments. As part of the Boreal Ecosystem-Atmosphere Study (BOREAS), CH{sub 4} flux was measured in a diverse peatland complex (bogs, fens, peat plateaus, and collapse scars), representing the complete range of temperature, moisture, and plant community gradients found in northern peatlands. The measurement period May to September 1994 was one of the warmest and driest seasons on record, which provided an opportunity to observe the short-term responses of different parts of the peatland ecosystem to a warmer and drier climate as an analog to predicted climate change in the region. (5 refs.)

  6. Trapped modes in waveguides with many small discontinuities

    Energy Technology Data Exchange (ETDEWEB)

    Kurennoy, S.S. (Physics Department, University of Maryland, College Park, Maryland 20742 (United States))

    1995-03-01

    It has been demonstrated recently [G. V. Stupakov and S. S. Kurennoy, Phys. Rev. E 49, 794 (1994)] that a single small discontinuity (such as an enlargement or a hole) on a smooth waveguide can result in the appearance of trapped electromagnetic modes with frequencies slightly below the waveguide cutoff frequencies. The present paper studies a similar phenomenon for a waveguide with many small discontinuities, which is a good model for the vacuum chamber of large accelerators. Frequencies of trapped modes and their contributions to the coupling impedance are calculated. The frequencies for the cases of a few discontinuities or a periodic structure coincide well with those from numerical simulations. The trapped modes produce sharp resonance peaks of the coupling impedance near the cutoff frequencies. The magnitude of these peaks, as well as the existence itself of a trapped mode, strongly depends on the distribution of discontinuities, or on the distance between them if a regular array is considered. The impedance in the extreme case can be as large as [ital N][sup 3] times that for a single discontinuity, where [ital N] is the number of discontinuities.

  7. Trapped modes in waveguides with many small discontinuities

    Science.gov (United States)

    Kurennoy, Sergey S.

    1995-03-01

    It has been demonstrated recently [G. V. Stupakov and S. S. Kurennoy, Phys. Rev. E 49, 794 (1994)] that a single small discontinuity (such as an enlargement or a hole) on a smooth waveguide can result in the appearance of trapped electromagnetic modes with frequencies slightly below the waveguide cutoff frequencies. The present paper studies a similar phenomenon for a waveguide with many small discontinuities, which is a good model for the vacuum chamber of large accelerators. Frequencies of trapped modes and their contributions to the coupling impedance are calculated. The frequencies for the cases of a few discontinuities or a periodic structure coincide well with those from numerical simulations. The trapped modes produce sharp resonance peaks of the coupling impedance near the cutoff frequencies. The magnitude of these peaks, as well as the existence itself of a trapped mode, strongly depends on the distribution of discontinuities, or on the distance between them if a regular array is considered. The impedance in the extreme case can be as large as N3 times that for a single discontinuity, where N is the number of discontinuities.

  8. Research progress on criteria for discontinuation of EGFR inhibitor therapy

    Directory of Open Access Journals (Sweden)

    Zhuang HQ

    2012-10-01

    Full Text Available Hong-qing Zhuang, Zhi-yong Yuan, Jun Wang, Ping Wang, Lu-jun Zhao, Bai-lin ZhangDepartment of Radiotherapy, Tianjin Medical University Cancer Institute and Hospital, Tianjin Key Laboratory of Cancer Prevention and Therapy, Tianjin Lung Cancer Center, Tianjin, People's Republic of ChinaAbstract: The clinical success of the epidermal growth factor receptor (EGFR tyrosine kinase inhibitors (TKI as therapeutic agents has prompted great interest in their further development and clinical testing for a wide variety of malignancies. However, most studies have focused on the efficacy of TKI, and few studies have been done on the criteria for their discontinuation. The current standard for drug discontinuation is “until progression”, based on change in tumor size. However, tumor size is not related to the gene expression which determines the efficacy of TKI in the final analysis, and it is also difficult to make a thorough and correct prediction based on tumor size when the TKI is discontinued. Nevertheless, clinical evaluation of the criteria for TKI discontinuation is still in its early days. Some promising findings have started to emerge. With the improving knowledge of EGFR and its inhibitors, it is expected that the criteria for discontinuation of EGFR inhibitor therapy will become clearer.Keywords: epidermal growth factor receptor, drug discontinuation, acquired drug-resistance

  9. Minimizers with discontinuous velocities for the electromagnetic variational method

    Science.gov (United States)

    de Luca, Jayme

    2010-08-01

    The electromagnetic two-body problem has neutral differential delay equations of motion that, for generic boundary data, can have solutions with discontinuous derivatives. If one wants to use these neutral differential delay equations with arbitrary boundary data, solutions with discontinuous derivatives must be expected and allowed. Surprisingly, Wheeler-Feynman electrodynamics has a boundary value variational method for which minimizer trajectories with discontinuous derivatives are also expected, as we show here. The variational method defines continuous trajectories with piecewise defined velocities and accelerations, and electromagnetic fields defined by the Euler-Lagrange equations on trajectory points. Here we use the piecewise defined minimizers with the Liénard-Wierchert formulas to define generalized electromagnetic fields almost everywhere (but on sets of points of zero measure where the advanced/retarded velocities and/or accelerations are discontinuous). Along with this generalization we formulate the generalized absorber hypothesis that the far fields vanish asymptotically almost everywhere and show that localized orbits with far fields vanishing almost everywhere must have discontinuous velocities on sewing chains of breaking points. We give the general solution for localized orbits with vanishing far fields by solving a (linear) neutral differential delay equation for these far fields. We discuss the physics of orbits with discontinuous derivatives stressing the differences to the variational methods of classical mechanics and the existence of a spinorial four-current associated with the generalized variational electrodynamics.

  10. On the solution of the Hartree-Fock-Bogoliubov equations by the conjugate gradient method

    Energy Technology Data Exchange (ETDEWEB)

    Egido, J.L. [Universidad Autonoma de Madrid (Spain). Dept. de Fisica Teorica; Lessing, J. [Universidad Autonoma de Madrid (Spain). Dept. de Fisica Teorica; Martin, V. [Analisis Numerico, Facultad de Informatica, Universidad Politecnica de Madrid, E-28660 Boadilla del Monte, Madrid (Spain); Robledo, L.M. [Universidad Autonoma de Madrid (Spain). Dept. de Fisica Teorica

    1995-11-06

    The conjugate gradient method is formulated in the Hilbert space for density and non-density dependent Hamiltonians. We apply it to the solution of the Hartree-Fock-Bogoliubov equations with constraints. As a numerical application we show calculations with the finite range density dependent Gogny force. The number of iterations required to reach convergence is reduced by a factor of three to four as compared with the standard gradient method. (orig.).

  11. A Discontinuous Galerkin Chimera Overset Solver

    Science.gov (United States)

    Galbraith, Marshall Christopher

    This work summarizes the development of an accurate, efficient, and flexible Computational Fluid Dynamics computer code that is an improvement relative to the state of the art. The improved accuracy and efficiency is obtained by using a high-order discontinuous Galerkin (DG) discretization scheme. In order to maximize the computational efficiency, quadrature-free integration and numerical integration optimized as matrix-vector multiplications is employed and implemented through a pre-processor (PyDG). Using the PyDG pre-processor, a C++ polynomial library has been developed that uses overloaded operators to design an efficient Domain Specific Language (DSL) that allows expressions involving polynomials to be written as if they are scalars. The DSL, which makes the syntax of computer code legible and intuitive, promotes maintainability of the software and simplifies the development of additional capabilities. The flexibility of the code is achieved by combining the DG scheme with the Chimera overset method. The Chimera overset method produces solutions on a set of overlapping grids that communicate through an exchange of data on grid boundaries (known as artificial boundaries). Finite volume and finite difference discretizations use fringe points, which are layers of points on the artificial boundaries, to maintain the interior stencil on artificial boundaries. The fringe points receive solution values interpolated from overset grids. Proper interpolation requires fringe points to be contained in overset grids. Insufficient overlap must be corrected by modifying the grid system. The Chimera scheme can also exclude regions of grids that lie outside the computational domain; a process commonly known as hole cutting. The Chimera overset method has traditionally enabled the use of high-order finite difference and finite volume approaches such as WENO and compact differencing schemes, which require structured meshes, for modeling fluid flow associated with complex

  12. Sobolev gradients and differential equations

    CERN Document Server

    Neuberger, J W

    2010-01-01

    A Sobolev gradient of a real-valued functional on a Hilbert space is a gradient of that functional taken relative to an underlying Sobolev norm. This book shows how descent methods using such gradients allow a unified treatment of a wide variety of problems in differential equations. For discrete versions of partial differential equations, corresponding Sobolev gradients are seen to be vastly more efficient than ordinary gradients. In fact, descent methods with these gradients generally scale linearly with the number of grid points, in sharp contrast with the use of ordinary gradients. Aside from the first edition of this work, this is the only known account of Sobolev gradients in book form. Most of the applications in this book have emerged since the first edition was published some twelve years ago. What remains of the first edition has been extensively revised. There are a number of plots of results from calculations and a sample MatLab code is included for a simple problem. Those working through a fair p...

  13. 密度梯度离心结合贴壁法培养成年大鼠骨髓间充质干细胞的生物学特性%Biological characteristics of bone marrow-derived mesenchymal stem cells cultured by density gradient centrifugation combined with adherence in adult rats

    Institute of Scientific and Technical Information of China (English)

    杨玉霞; 郑健樑; 张平; 林健贤; 张文忻

    2007-01-01

    BACKGROUND: It is important to study the methods of culturing bone marrow-derived mesenchymal stem cells (MSCs) to obtain a great amount of high purity MSCs for applying ocular tissues constructed by tissue engineering technique to treat eye diseases.OBJECTTVE: To separate and culture in vitro MSCs from bone marrow of the adult rats by density gradient centrifugation combined with adherence culture, and observe the growing characteristics and the possibility of mass multiplication.DESIGN: A completely randomized grouping design/repetitive measuring experiment.SETTING: Pathological laboratory, Zhongshan Ophthalmic Center, Sun Yat-sen University.MATERIALS: Four six-week-old SD rats about 250 g, grade Ⅱ of cleaning, were provided by the Animal Center of Sun Yat-sen University [certificate number: SCSK(Yue)2004/0011], about 250 g each rat and there was no limit to the sex. The main reagents and instruments included low sugar Dulbecco modified Eagle culture medium (DMEM/F12, American Gibco Corporation), trypsin (fetal bovine serum (FBS, Hangzhou Sijiqing Bio-Engineering Material Research Institute), American Gibco Corporation), disodium edetate, lymphocyte separating medium, fibronectin, CD44, CD34, CD31 monoclonal antibodies, two-step-method kit for immunohistochemistry (Beijing Zhong shan Biotechnology Corporation).METHODS: This experiment was conducted at the Key laboratory of Ophthalmology (Sun Yat-sen University), Ministry of ethanol (750 g/L) for 10 minutes. Under aseptic condition, the medullaris cavitas was exposed, the syringe containing application m edium was directly punctured into the femoral cavity, the cells in the medullaris cavitas were washed out with the culture medium containing heparin and taken as the cell suspension. The bone marrow-derived MSCs were separated and purified by density gradient centrifugation combined with adherence culture, and the growing conditions of the wells. When the cells had generally connected with each other, they were

  14. Gradient zone boundary control in salt gradient solar ponds

    Energy Technology Data Exchange (ETDEWEB)

    Hull, John R. (Downers Grove, IL)

    1984-01-01

    A method and apparatus for suppressing zone boundary migration in a salt gradient solar pond includes extending perforated membranes across the pond at the boundaries, between the convective and non-convective zones, the perforations being small enough in size to prevent individual turbulence disturbances from penetrating the hole, but being large enough to allow easy molecular diffusion of salt thereby preventing the formation of convective zones in the gradient layer. The total area of the perforations is a sizable fraction of the membrane area to allow sufficient salt diffusion while preventing turbulent entrainment into the gradient zone.

  15. Large scale radial stability density of Hill's equation

    NARCIS (Netherlands)

    Broer, Henk; Levi, Mark; Simo, Carles

    2013-01-01

    This paper deals with large scale aspects of Hill's equation (sic) + (a + bp(t)) x = 0, where p is periodic with a fixed period. In particular, the interest is the asymptotic radial density of the stability domain in the (a, b)-plane. It turns out that this density changes discontinuously in a certa

  16. Socio-Economic Differentials in Contraceptive Discontinuation in India

    Directory of Open Access Journals (Sweden)

    Kiran Agrahari

    2016-05-01

    Full Text Available Fertility divergence amid declining in use of modern contraception in many states of India needs urgent research and programmatic attention. Although utilization of antenatal, natal, and post-natal care has shown spectacular increase in post National Rural Health Mission (NRHM period, the contraceptive use had shown a declining trend. Using the calendar data from the National Family Health Survey–3, this article examines the reasons of contraceptive discontinuation among spacing method users by socio-economic groups in India. Bivariate and multivariate analyses and life table discontinuation rates are used in the analyses. Results suggest that about half of the pill users, two fifths of the condom users, one third of traditional method users, and one fifth of IUD users discontinue a method in first 12 months of use. However, the discontinuation of all three modern spacing methods declines in subsequent period (within 12-36 months. The probability of method failure was highest among traditional method users and higher among poor and less educated that may lead to unwanted/mistimed birth. Although discontinuation of condom declines with economic status, it does not show any large variation for pill users. The contraceptive discontinuation was significantly associated with duration of use, age, parity, contraceptive method, religion, and contraceptive intention. Based on these findings, it is suggested that follow-up services to modern spacing method users, increasing counseling for spacing method users, motivating the traditional method user to use modern spacing method, and improving the overall quality of family planning services can reduce the discontinuation of spacing method.

  17. On the combined gravity gradient modeling for applied geophysics

    CERN Document Server

    Veryaskin, Alexey

    2007-01-01

    Gravity gradiometry research and development has intensified in recent years to the extent that technologies providing a resolution of about 1 Eotvos per 1 sec average shall likely soon be available for multiple critical applications such as natural resources exploration, oil reservoir monitoring and defence establishment. Much of the content of this paper was composed a decade ago, and only minor modifications were required for the conclusions to be just as applicable today. In this paper we demonstrate how gravity gradient data can be modeled, and show some examples of how gravity gradient data can be combined in order to extract valuable information. In particular, this study demonstrates the importance of two gravity gradient components, Txz and Tyz which, when processed together, can provide more information on subsurface density contrasts than that derived solely from the vertical gravity gradient (Tzz).

  18. The effect of mechanical discontinuities on the growth of faults

    Science.gov (United States)

    Bonini, Lorenzo; Basili, Roberto; Bonanno, Emanuele; Toscani, Giovanni; Burrato, Pierfrancesco; Seno, Silvio; Valensise, Gianluca

    2016-04-01

    The growth of natural faults is controlled by several factors, including the nature of host rocks, the strain rate, the temperature, and the presence of fluids. In this work we focus on the mechanical characteristics of host rocks, and in particular on the role played by thin mechanical discontinuities on the upward propagation of faults and on associated secondary effects such as folding and fracturing. Our approach uses scaled, analogue models where natural rocks are simulated by wet clay (kaolin). A clay cake is placed above two rigid blocks in a hanging wall/footwall configuration on either side of a planar fault. Fault activity is simulated by motor-controlled movements of the hanging wall. We reproduce three types of faults: a 45°-dipping normal fault, a 45°-dipping reverse fault and a 30°-dipping reverse fault. These angles are selected as representative of most natural dip-slip faults. The analogues of the mechanical discontinuities are obtained by precutting the wet clay cake before starting the hanging wall movement. We monitor the experiments with high-resolution cameras and then obtain most of the data through the Digital Image Correlation method (D.I.C.). This technique accurately tracks the trajectories of the particles of the analogue material during the deformation process: this allows us to extract displacement field vectors plus the strain and shear rate distributions on the lateral side of the clay block, where the growth of new faults is best seen. Initially we run a series of isotropic experiments, i.e. experiments without discontinuities, to generate a reference model: then we introduce the discontinuities. For the extensional models they are cut at different dip angles, from horizontal to 45°-dipping, both synthetic and antithetic with respect to the master fault, whereas only horizontal discontinuities are introduced in the contractional models. Our experiments show that such discontinuities control: 1) the propagation rate of faults

  19. Road density

    Data.gov (United States)

    U.S. Environmental Protection Agency — Road density is generally highly correlated with amount of developed land cover. High road densities usually indicate high levels of ecological disturbance. More...

  20. Solutions of the Wheeler-Feynman equations with discontinuous velocities.

    Science.gov (United States)

    de Souza, Daniel Câmara; De Luca, Jayme

    2015-01-01

    We generalize Wheeler-Feynman electrodynamics with a variational boundary value problem for continuous boundary segments that might include velocity discontinuity points. Critical-point orbits must satisfy the Euler-Lagrange equations of the action functional at most points, which are neutral differential delay equations (the Wheeler-Feynman equations of motion). At velocity discontinuity points, critical-point orbits must satisfy the Weierstrass-Erdmann continuity conditions for the partial momenta and the partial energies. We study a special setup having the shortest time-separation between the (infinite-dimensional) boundary segments, for which case the critical-point orbit can be found using a two-point boundary problem for an ordinary differential equation. For this simplest setup, we prove that orbits can have discontinuous velocities. We construct a numerical method to solve the Wheeler-Feynman equations together with the Weierstrass-Erdmann conditions and calculate some numerical orbits with discontinuous velocities. We also prove that the variational boundary value problem has a unique solution depending continuously on boundary data, if the continuous boundary segments have velocity discontinuities along a reduced local space.