Fine structure of nucleoli in the ciliate Didinium nasutum*

OpenAIRE

Karajan, Bella; Popenko, Vladimir; Leonova, Olga

2003-01-01

The macronuclear nucleoli of vegetative non-dividing cells of Didinium nasutum display inverted position of the main parts: the granular component is inside and the dense fibrillar one, in form of discrete bands, is mainly at the periphery. Before binary fission, the nucleoli are degranulated and their fibrillar bands scatter throughout the macronucleus, to be segregated during division between the daughter cells, where they begin to re-form the granular parts. In young resting cysts small nu...

Visualization of the Nucleolus Using Ethynyl Uridine

Czech Academy of Sciences Publication Activity Database

Dvořáčková, M.; Fajkus, Jiří

2018-01-01

Roč. 9, FEB2018 (2018) ISSN 1664-462X Institutional support: RVO:68081707 Keywords : dense fibrillar components * ribosomal-rna * actinomycin-d * transcription sites Subject RIV: EF - Botanics OBOR OECD: Plant science s, botany Impact factor: 4.298, year: 2016

Penta-fibrillar assembly: A Building block collagen based materials

Indian Academy of Sciences (India)

There is a smartness in the way the penta-fibrils behave in collagen based biomaterials. It is one of the intriguing nano material with a size of about 4 nano meter diagonal size. There are several intermolecular forces that participate in the penta fibrillar assembly, which derive importance in smart behavior of collagen.

Bonding and structure in dense multi-component molecular mixtures.

Science.gov (United States)

Meyer, Edmund R; Ticknor, Christopher; Bethkenhagen, Mandy; Hamel, Sebastien; Redmer, Ronald; Kress, Joel D; Collins, Lee A

2015-10-28

We have performed finite-temperature density functional theory molecular dynamics simulations on dense methane, ammonia, and water mixtures (CH4:NH3:H2O) for various compositions and temperatures (2000 K ≤ T ≤ 10,000 K) that span a set of possible conditions in the interiors of ice-giant exoplanets. The equation-of-state, pair distribution functions, and bond autocorrelation functions (BACF) were used to probe the structure and dynamics of these complex fluids. In particular, an improvement to the choice of the cutoff in the BACF was developed that allowed analysis refinements for density and temperature effects. We note the relative changes in the nature of these systems engendered by variations in the concentration ratios. A basic tenet emerges from all these comparisons that varying the relative amounts of the three heavy components (C,N,O) can effect considerable changes in the nature of the fluid and may in turn have ramifications for the structure and composition of various planetary layers.

Soft grippers using micro-fibrillar adhesives for transfer printing.

Science.gov (United States)

Song, Sukho; Sitti, Metin

2014-07-23

The adhesive characteristics of fibrillar adhesives on a soft deformable membrane are reported. A soft gripper with an inflatable membrane covered by elastomer mushroom-shaped microfibers have a superior conformation to non-planar 3D part geometries, enabling the transfer printing of various parts serially or in parallel. © 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Mechanics of load-drag-unload contact cleaning of gecko-inspired fibrillar adhesives.

Science.gov (United States)

Abusomwan, Uyiosa A; Sitti, Metin

2014-10-14

Contact self-cleaning of gecko-inspired synthetic adhesives with mushroom-shaped tips has been demonstrated recently using load-drag-unload cleaning procedures similar to that of the natural animal. However, the underlying mechanics of contact cleaning has yet to be fully understood. In this work, we present a detailed experiment of contact self-cleaning that shows that rolling is the dominant mechanism of cleaning for spherical microparticle contaminants, during the load-drag-unload procedure. We also study the effect of dragging rate and normal load on the particle rolling friction. A model of spherical particle rolling on an elastomer fibrillar adhesive interface is developed and agrees well with the experimental results. This study takes us closer to determining design parameters for achieving self-cleaning fibrillar adhesives.

Collagen metabolism and basement membrane formation in cultures of mouse mammary epithelial cells: Induction of assembly on fibrillar type I collagen substrata

International Nuclear Information System (INIS)

David, G.; van der Schueren, B.; van den Berghe, H.; Nusgens, B.; Van Cauwenberge, D.; Lapiere, C.

1987-01-01

Collagen metabolism was compared in cultures of mouse mammary epithelial cells maintained on plastic or fibrillar type I collagen gel substrata. The accumulation of dialysable and non-dialysable [ 3 H]hydroxyproline and the identification of the collagens produced suggest no difference between substrata in the allover rates of collagen synthesis and degradation. The proportion of the [ 3 H]collagen which accumulates in the monolayers of cultures on collagen, however, markedly exceeds that of cultures on plastic. Cultures on collagen deposit a sheet-like layer of extracellular matrix materials on the surface of the collagen fibers. Transformed cells on collagen produce and accumulate more [ 3 H]collage, yet are less effective in basement membrane formation than normal cells, indicting that the accumulation of collagen alone and the effect of interstitial collagen thereupon do not suffice. Thus, exogenous fibrillar collagen appears to enhance, but is not sufficient for proper assembly of collagenous basement membrane components near the basal epithelial cell surface

Reproduction of the FC/DFC units in nucleoli

Czech Academy of Sciences Publication Activity Database

Smirnov, E.; Hornacek, M.; Kováčik, L.; Mazel, T.; Schrofel, A.; Svidenská, S.; Skalníková, M.; Bártová, Eva; Cmarko, D.; Raška, I.

2016-01-01

Roč. 7, č. 2 (2016), s. 203-215 ISSN 1949-1034 R&D Projects: GA ČR GBP302/12/G157 Institutional support: RVO:68081707 Keywords : ribosomal-rna genes * dense fibrillar components * polymerase-i transcription Subject RIV: BO - Biophysics Impact factor: 2.387, year: 2016

Laser rapid forming technology of high-performance dense metal components with complex structure

Science.gov (United States)

Huang, Weidong; Chen, Jing; Li, Yanming; Lin, Xin

2005-01-01

Laser rapid forming (LRF) is a new and advanced manufacturing technology that has been developed on the basis of combining high power laser cladding technology with rapid prototyping (RP) to realize net shape forming of high performance dense metal components without dies. Recently we have developed a set of LRF equipment. LRF experiments were carried out on the equipment to investigate the influences of processing parameters on forming characterizations systematically with the cladding powder materials as titanium alloys, superalloys, stainless steel, and copper alloys. The microstructure of laser formed components is made up of columnar grains or columnar dendrites which grow epitaxially from the substrate since the solid components were prepared layer by layer additionally. The result of mechanical testing proved that the mechanical properties of laser formed samples are similar to or even over that of forging and much better than that of casting. It is shown in this paper that LRF technology is providing a new solution for some difficult processing problems in the high tech field of aviation, spaceflight and automobile industries.

Nanomechanical properties of distinct fibrillar polymorphs of the protein α-synuclein

Science.gov (United States)

Makky, Ali; Bousset, Luc; Polesel-Maris, Jérôme; Melki, Ronald

2016-11-01

Alpha-synuclein (α-Syn) is a small presynaptic protein of 140 amino acids. Its pathologic intracellular aggregation within the central nervous system yields protein fibrillar inclusions named Lewy bodies that are the hallmarks of Parkinson’s disease (PD). In solution, pure α-Syn adopts an intrinsically disordered structure and assembles into fibrils that exhibit considerable morphological heterogeneity depending on their assembly conditions. We recently established tightly controlled experimental conditions allowing the assembly of α-Syn into highly homogeneous and pure polymorphs. The latter exhibited differences in their shape, their structure but also in their functional properties. We have conducted an AFM study at high resolution and performed a statistical analysis of fibrillar α-Syn shape and thermal fluctuations to calculate the persistence length to further assess the nanomechanical properties of α-Syn polymorphs. Herein, we demonstrated quantitatively that distinct polymorphs made of the same protein (wild-type α-Syn) show significant differences in their morphology (height, width and periodicity) and physical properties (persistence length, bending rigidity and axial Young’s modulus).

Effect of electrostatic Interactions on the Percolation Concentration of Fibrillar ß-Lactoglobuline Gels

NARCIS (Netherlands)

Veerman, C.; Ruis, H.G.M.; Sagis, L.M.C.; Linden, van der E.

2002-01-01

The effect of electrostatic interactions on the critical percolation concentration (cp) of fibrillar -lactoglobulin gels at pH 2 was investigated using rheological measurements, transmission electron microscopy (TEM), and performing conversion experiments. A decreasing cp with increasing ionic

Isolation of nucleoli from Ehrlich ascites tumor cells and dynamics of nascent RNA within isolated nucleoli.

Science.gov (United States)

Thiry, Marc; Ploton, Dominique

2008-01-01

Here we describe a new, rapid method for isolating nucleoli from Ehrlich tumor cells that preserves their morphological integrity and high transcriptional activity. Until now, methods for isolation of nucleoli were generally assumed to empty one of their three main compartments, the fibrillar center, of its contents. This new method consists of sonicating cells in an isotonic medium containing MgSO(4), spermidine, and spermine, followed by separation of nucleoli through a Percoll density gradient. Using the nonisotopic approach of labelling with BrUTP, we have further investigated the dynamics of nascent ribosomal RNAs (rRNAs) within morphologically intact isolated nucleoli at the electron microscope level. We show that ribosomal transcripts are elongated in the cortex of the fibrillar center and then enter the surrounding dense fibrillar component.

Immunodetection of nucleolar proteins and ultrastructure of nucleoli of soybean root meristematic cells treated with chilling stress and after recovery.

Science.gov (United States)

Stepiński, Dariusz

2009-03-01

The nucleolar proteins, fibrillarin and nucleophosmin, have been identified immunofluorescently in the root meristematic cells of soybean seedlings under varying experimental conditions: at 25 degrees C (control), chilling at 10 degrees C for 3 h and 4 days and recovery from the chilling stress at 25 degrees C. In each experimental variant, the immunofluorescence signals were present solely at the nucleolar territories. Fluorescent staining for both proteins was mainly in the shape of circular domains that are assumed to correspond to the dense fibrillar component of the nucleoli. The fewest fluorescent domains were observed in the nucleoli of chilled plants, and the highest number was observed in the plants recovered after chilling. This difference in the number of circular domains in the nucleoli of each variant may indicate various levels of these proteins in each variant. Both the number of circular domains and the level of these nucleolar proteins changed with changes in the transcriptional activity of the nucleoli, with the more metabolically active cell having higher numbers of active areas in the nucleolus and higher levels of nucleolar proteins, and conversely. Electron microscopic studies revealed differences in the ultrastructure of the nucleoli in all experimental variants and confirmed that the number of fibrillar centres surrounded by dense fibrillar component was the lowest in the nucleoli of chilled plants, and the highest in the nucleoli of recovered seedlings.

Binding, internalization and fate of Huntingtin Exon1 fibrillar assemblies in mitotic and nonmitotic neuroblastoma cells.

Science.gov (United States)

Ruiz-Arlandis, G; Pieri, L; Bousset, L; Melki, R

2016-02-01

The aggregation of Huntingtin (HTT) protein and of its moiety encoded by its Exon1 (HTTExon1) into fibrillar structures inside neurons is the molecular hallmark of Huntington's disease. Prion-like transmission of these aggregates between cells has been demonstrated. The cell-to-cell transmission mechanisms of these protein aggregates and the susceptibility of different kinds of neuronal cells to these toxic assemblies still need assessment. Here, we documented the binding to and internalization by differentiated and undifferentiated neuroblastoma cells of exogenous fibrillar HTTExon1 and polyglutamine (polyQ) polypeptides containing the same number of glutamines. We assessed the contribution of endocytosis to fibrillar HTTExon1 uptake, their intracellular localization and fate. We observed that undifferentiated neuroblastoma cells were more susceptible to fibrillar HTTExon1 and polyQ than their differentiated counterparts. Furthermore, we demonstrated that exogenous HTTExon1 aggregates are mainly taken up by endocytosis and directed to lysosomal compartments in both mitotic and quiescent cells. These data suggest that the rates of endocytic processes that differ in mitotic and quiescent cells strongly impact the uptake of exogenous HTTExon1 and polyQ fibrils. This may be either the consequence of distinct metabolisms or distributions of specific protein partners for amyloid-like assemblies at the surface of highly dividing versus quiescent cells. Our results highlight the importance of endocytic processes in the internalization of exogenous HTTExon1 fibrils and suggest that a proportion of those assemblies reach the cytosol where they can amplify by recruiting the endogenous protein after escaping, by yet an unknown process, from the endo-lysosomal compartments. © 2015 British Neuropathological Society.

Molecular nanomechanics of nascent bone: fibrillar toughening by mineralization

Science.gov (United States)

Buehler, Markus J.

2007-07-01

Mineralized collagen fibrils are highly conserved nanostructural building blocks of bone. By a combination of molecular dynamics simulation and theoretical analysis it is shown that the characteristic nanostructure of mineralized collagen fibrils is vital for its high strength and its ability to sustain large deformation, as is relevant to the physiological role of bone, creating a strong and tough material. An analysis of the molecular mechanisms of protein and mineral phases under large deformation of mineralized collagen fibrils reveals a fibrillar toughening mechanism that leads to a manifold increase of energy dissipation compared to fibrils without mineral phase. This fibrillar toughening mechanism increases the resistance to fracture by forming large local yield regions around crack-like defects, a mechanism that protects the integrity of the entire structure by allowing for localized failure. As a consequence, mineralized collagen fibrils are able to tolerate microcracks of the order of several hundred micrometres in size without causing any macroscopic failure of the tissue, which may be essential to enable bone remodelling. The analysis proves that adding nanoscopic small platelets to collagen fibrils increases their Young's modulus and yield strength as well as their fracture strength. We find that mineralized collagen fibrils have a Young's modulus of 6.23 GPa (versus 4.59 GPa for the collagen fibril), yield at a tensile strain of 6.7% (versus 5% for the collagen fibril) and feature a fracture stress of 0.6 GPa (versus 0.3 GPa for the collagen fibril).

Molecular nanomechanics of nascent bone: fibrillar toughening by mineralization

International Nuclear Information System (INIS)

Buehler, Markus J

2007-01-01

Mineralized collagen fibrils are highly conserved nanostructural building blocks of bone. By a combination of molecular dynamics simulation and theoretical analysis it is shown that the characteristic nanostructure of mineralized collagen fibrils is vital for its high strength and its ability to sustain large deformation, as is relevant to the physiological role of bone, creating a strong and tough material. An analysis of the molecular mechanisms of protein and mineral phases under large deformation of mineralized collagen fibrils reveals a fibrillar toughening mechanism that leads to a manifold increase of energy dissipation compared to fibrils without mineral phase. This fibrillar toughening mechanism increases the resistance to fracture by forming large local yield regions around crack-like defects, a mechanism that protects the integrity of the entire structure by allowing for localized failure. As a consequence, mineralized collagen fibrils are able to tolerate microcracks of the order of several hundred micrometres in size without causing any macroscopic failure of the tissue, which may be essential to enable bone remodelling. The analysis proves that adding nanoscopic small platelets to collagen fibrils increases their Young's modulus and yield strength as well as their fracture strength. We find that mineralized collagen fibrils have a Young's modulus of 6.23 GPa (versus 4.59 GPa for the collagen fibril), yield at a tensile strain of 6.7% (versus 5% for the collagen fibril) and feature a fracture stress of 0.6 GPa (versus 0.3 GPa for the collagen fibril)

Automated determination of fibrillar structures by simultaneous model building and fiber diffraction refinement.

Science.gov (United States)

Potrzebowski, Wojciech; André, Ingemar

2015-07-01

For highly oriented fibrillar molecules, three-dimensional structures can often be determined from X-ray fiber diffraction data. However, because of limited information content, structure determination and validation can be challenging. We demonstrate that automated structure determination of protein fibers can be achieved by guiding the building of macromolecular models with fiber diffraction data. We illustrate the power of our approach by determining the structures of six bacteriophage viruses de novo using fiber diffraction data alone and together with solid-state NMR data. Furthermore, we demonstrate the feasibility of molecular replacement from monomeric and fibrillar templates by solving the structure of a plant virus using homology modeling and protein-protein docking. The generated models explain the experimental data to the same degree as deposited reference structures but with improved structural quality. We also developed a cross-validation method for model selection. The results highlight the power of fiber diffraction data as structural constraints.

Quantitative analysis of nucleolar chromatin distribution in the complex convoluted nucleoli of Didinium nasutum (Ciliophora).

Science.gov (United States)

Leonova, Olga G; Karajan, Bella P; Ivlev, Yuri F; Ivanova, Julia L; Skarlato, Sergei O; Popenko, Vladimir I

2013-01-01

We have earlier shown that the typical Didinium nasutum nucleolus is a complex convoluted branched domain, comprising a dense fibrillar component located at the periphery of the nucleolus and a granular component located in the central part. Here our main interest was to study quantitatively the spatial distribution of nucleolar chromatin structures in these convoluted nucleoli. There are no "classical" fibrillar centers in D.nasutum nucleoli. The spatial distribution of nucleolar chromatin bodies, which play the role of nucleolar organizers in the macronucleus of D.nasutum, was studied using 3D reconstructions based on serial ultrathin sections. The relative number of nucleolar chromatin bodies was determined in macronuclei of recently fed, starved D.nasutum cells and in resting cysts. This parameter is shown to correlate with the activity of the nucleolus. However, the relative number of nucleolar chromatin bodies in different regions of the same convoluted nucleolus is approximately the same. This finding suggests equal activity in different parts of the nucleolar domain and indicates the existence of some molecular mechanism enabling it to synchronize this activity in D. nasutum nucleoli. Our data show that D. nasutum nucleoli display bipartite structure. All nucleolar chromatin bodies are shown to be located outside of nucleoli, at the periphery of the fibrillar component.

Hierarchical Formation of Fibrillar and Lamellar Self-Assemblies from Guanosine-Based Motifs

Directory of Open Access Journals (Sweden)

Paolo Neviani

2010-01-01

Full Text Available Here we investigate the supramolecular polymerizations of two lipophilic guanosine derivatives in chloroform by light scattering technique and TEM experiments. The obtained data reveal the presence of several levels of organization due to the hierarchical self-assembly of the guanosine units in ribbons that in turn aggregate in fibrillar or lamellar soft structures. The elucidation of these structures furnishes an explanation to the physical behaviour of guanosine units which display organogelator properties.

Data in support of the identification of neuronal and astrocyte proteins interacting with extracellularly applied oligomeric and fibrillar α-synuclein assemblies by mass spectrometry.

Science.gov (United States)

Shrivastava, Amulya Nidhi; Redeker, Virginie; Fritz, Nicolas; Pieri, Laura; Almeida, Leandro G; Spolidoro, Maria; Liebmann, Thomas; Bousset, Luc; Renner, Marianne; Léna, Clément; Aperia, Anita; Melki, Ronald; Triller, Antoine

2016-06-01

α-Synuclein (α-syn) is the principal component of Lewy bodies, the pathophysiological hallmark of individuals affected by Parkinson disease (PD). This neuropathologic form of α-syn contributes to PD progression and propagation of α-syn assemblies between neurons. The data we present here support the proteomic analysis used to identify neuronal proteins that specifically interact with extracellularly applied oligomeric or fibrillar α-syn assemblies (conditions 1 and 2, respectively) (doi: 10.15252/embj.201591397[1]). α-syn assemblies and their cellular partner proteins were pulled down from neuronal cell lysed shortly after exposure to exogenous α-syn assemblies and the associated proteins were identified by mass spectrometry using a shotgun proteomic-based approach. We also performed experiments on pure cultures of astrocytes to identify astrocyte-specific proteins interacting with oligomeric or fibrillar α-syn (conditions 3 and 4, respectively). For each condition, proteins interacting selectively with α-syn assemblies were identified by comparison to proteins pulled-down from untreated cells used as controls. The mass spectrometry data, the database search and the peak lists have been deposited to the ProteomeXchange Consortium database via the PRIDE partner repository with the dataset identifiers PRIDE: PXD002256 to PRIDE: PXD002263 and doi: 10.6019/PXD002256 to 10.6019/PXD002263.

Fibrillar dimer formation of islet amyloid polypeptides

Energy Technology Data Exchange (ETDEWEB)

Chiu, Chi-cheng [Univ. of Chicago, IL (United States); Argonne National Lab. (ANL), Argonne, IL (United States); de Pablo, Juan J. [Univ. of Chicago, IL (United States); Argonne National Lab. (ANL), Argonne, IL (United States)

2015-05-08

Amyloid deposits of human islet amyloid polypeptide (hIAPP), a 37-residue hormone co-produced with insulin, have been implicated in the development of type 2 diabetes. Residues 20 – 29 of hIAPP have been proposed to constitute the amyloidogenic core for the aggregation process, yet the segment is mostly unstructured in the mature fibril, according to solid-state NMR data. Here we use molecular simulations combined with bias-exchange metadynamics to characterize the conformational free energies of hIAPP fibrillar dimer and its derivative, pramlintide. We show that residues 20 – 29 are involved in an intermediate that exhibits transient β-sheets, consistent with recent experimental and simulation results. By comparing the aggregation of hIAPP and pramlintide, we illustrate the effects of proline residues on inhibition of the dimerization of IAPP. The mechanistic insights presented here could be useful for development of therapeutic inhibitors of hIAPP amyloid formation.

Fibrillar dimer formation of islet amyloid polypeptides

Directory of Open Access Journals (Sweden)

Chi-cheng Chiu

2015-09-01

Full Text Available Amyloid deposits of human islet amyloid polypeptide (hIAPP, a 37-residue hormone co-produced with insulin, have been implicated in the development of type 2 diabetes. Residues 20 – 29 of hIAPP have been proposed to constitute the amyloidogenic core for the aggregation process, yet the segment is mostly unstructured in the mature fibril, according to solid-state NMR data. Here we use molecular simulations combined with bias-exchange metadynamics to characterize the conformational free energies of hIAPP fibrillar dimer and its derivative, pramlintide. We show that residues 20 – 29 are involved in an intermediate that exhibits transient β-sheets, consistent with recent experimental and simulation results. By comparing the aggregation of hIAPP and pramlintide, we illustrate the effects of proline residues on inhibition of the dimerization of IAPP. The mechanistic insights presented here could be useful for development of therapeutic inhibitors of hIAPP amyloid formation.

Decreased expression of microRNA-29 family in leiomyoma contributes to increased major fibrillar collagen production.

Science.gov (United States)

Marsh, Erica E; Steinberg, Marissa L; Parker, J Brandon; Wu, Ju; Chakravarti, Debabrata; Bulun, Serdar E

2016-09-01

To determine the expression and function of the microRNA-29 family (miRNA-29a, miRNA-29b, miRNA-29c) in human leiomyoma and myometrium. Basic science experimental design. Academic medical center. Women undergoing surgery for symptomatic uterine fibroids. Overexpression and knockdown of miRNA-29a, miRNA-29b, and miRNA-29c in primary leiomyoma and myometrial cells. [1] Expression of the miRNA-29 family members in vivo in leiomyoma versus myometrium; [2] Major fibrillar collagen (I, II, III) expression in leiomyoma and myometrial cells with manipulation of miRNA-29 species. Members of the miRNA-29 family (29a, 29b, 29c) are all down-regulated in leiomyoma versus myometrium in vivo. The expression of the miRNA-29 family can be successfully modulated in primary leiomyoma and myometrial cells. Overexpression of the miRNA-29 family in leiomyoma cells results in down-regulation of the major fibrillar collagens. Down-regulation of the miRNA-29 species in myometrium results in an increase in collagen type III deposition. The miRNA-29 family is consistently down-regulated in leiomyoma compared to matched myometrial tissue. This down-regulation contributes to the increased collagen seen in leiomyomas versus myometrium. When miRNA-29 members are overexpressed in leiomyoma cells, protein levels of all of the major fibrillar collagens decrease. The miRNA-29 members are potential therapeutic targets in this highly prevalent condition. Copyright © 2016 American Society for Reproductive Medicine. Published by Elsevier Inc. All rights reserved.

The 26S Proteasome Degrades the Soluble but Not the Fibrillar Form of the Yeast Prion Ure2p In Vitro.

Directory of Open Access Journals (Sweden)

Kai Wang

Full Text Available Yeast prions are self-perpetuating protein aggregates that cause heritable and transmissible phenotypic traits. Among these, [PSI+] and [URE3] stand out as the most studied yeast prions, and result from the self-assembly of the translation terminator Sup35p and the nitrogen catabolism regulator Ure2p, respectively, into insoluble fibrillar aggregates. Protein quality control systems are well known to govern the formation, propagation and transmission of these prions. However, little is known about the implication of the cellular proteolytic machineries in their turnover. We previously showed that the 26S proteasome degrades both the soluble and fibrillar forms of Sup35p and affects [PSI+] propagation. Here, we show that soluble native Ure2p is degraded by the proteasome in an ubiquitin-independent manner. Proteasomal degradation of Ure2p yields amyloidogenic N-terminal peptides and a C-terminal resistant fragment. In contrast to Sup35p, fibrillar Ure2p resists proteasomal degradation. Thus, structural variability within prions may dictate their ability to be degraded by the cellular proteolytic systems.

The 26S Proteasome Degrades the Soluble but Not the Fibrillar Form of the Yeast Prion Ure2p In Vitro

Science.gov (United States)

Wang, Kai; Redeker, Virginie; Madiona, Karine; Melki, Ronald; Kabani, Mehdi

2015-01-01

Yeast prions are self-perpetuating protein aggregates that cause heritable and transmissible phenotypic traits. Among these, [PSI +] and [URE3] stand out as the most studied yeast prions, and result from the self-assembly of the translation terminator Sup35p and the nitrogen catabolism regulator Ure2p, respectively, into insoluble fibrillar aggregates. Protein quality control systems are well known to govern the formation, propagation and transmission of these prions. However, little is known about the implication of the cellular proteolytic machineries in their turnover. We previously showed that the 26S proteasome degrades both the soluble and fibrillar forms of Sup35p and affects [PSI +] propagation. Here, we show that soluble native Ure2p is degraded by the proteasome in an ubiquitin-independent manner. Proteasomal degradation of Ure2p yields amyloidogenic N-terminal peptides and a C-terminal resistant fragment. In contrast to Sup35p, fibrillar Ure2p resists proteasomal degradation. Thus, structural variability within prions may dictate their ability to be degraded by the cellular proteolytic systems. PMID:26115123

Application of MALDI-TOF mass spectrometry for study on fibrillar and oligomeric aggregates of alpha-synuclein

NARCIS (Netherlands)

Severinovskaya, O. V.; Kovalska, V B; Losytskyy, M Yu; Cherepanov, V. V.; Subramaniam, V.; Yarmoluk, S M

2014-01-01

Aim. To study the α-synuclein (ASN) aggregates of different structural origin, namely amyloid fibrils and spherical oligomers, in comparison with a native protein. Methods. MALDI TOF mass spectrometry and atomic force microscopy (AFM). Results. The mass spectra of native and fibrillar ASN have

Effect of nordihydroguaiaretic acid cross-linking on fibrillar collagen: in vitro evaluation of fibroblast adhesion strength and migration

Directory of Open Access Journals (Sweden)

Ana Y. Rioja

2017-04-01

Full Text Available Fixation is required to reinforce reconstituted collagen for orthopedic bioprostheses such as tendon or ligament replacements. Previous studies have demonstrated that collagen fibers cross-linked by the biocompatible dicatechol nordihydroguaiaretic acid (NDGA have mechanical strength comparable to native tendons. This work focuses on investigating fibroblast behavior on fibrillar and NDGA cross-linked type I collagen to determine if NDGA modulates cell adhesion, morphology, and migration. A spinning disk device that applies a range of hydrodynamic forces under uniform chemical conditions was employed to sensitively quantify cell adhesion strength, and a radial barrier removal assay was used to measure cell migration on films suitable for these quantitative in vitro assays. The compaction of collagen films, mediated by the drying and cross-linking fabrication process, suggests a less open organization compared to native fibrillar collagen that likely allowed the collagen to form more inter-chain bonds and chemical links with NDGA polymers. Fibroblasts strongly adhered to and migrated on native and NDGA cross-linked fibrillar collagen; however, NDGA modestly reduced cell spreading, adhesion strength and migration rate. Thus, it is hypothesized that NDGA cross-linking masked some adhesion receptor binding sites either physically, chemically, or both, thereby modulating adhesion and migration. This alteration in the cell-material interface is considered a minimal trade-off for the superior mechanical and compatibility properties of NDGA cross-linked collagen compared to other fixation approaches.

α particle induced scintillation in dense gaseous argon: emission spectra and temporal behavior of its ionic component

International Nuclear Information System (INIS)

Carvalho, M.J.; Klein, G.

1980-01-01

The scintillation induced by α particles in dense gaseous argon (above 1 atm) has been studied. The electric field dependence of the scintillation, shows that the second continuum (centred around 1270A) stems from the neutral as well as from the ionic species, initially created by the impinging particle. Intensity decay curves and emission spectra of these neutral excitation and ionic components were determined. Time constants suggest that the recombination mechanism is responsible for a delayed formation of the second continuum states, 1 Σ + sub(u) and 3 Σ + sub(u). The third continuum of the emission spectra, which spreads at longer wavelengths, from 1600A to 2800A, is field independent

Brain propagation of transduced α-synuclein involves non-fibrillar protein species and is enhanced in α-synuclein null mice.

Science.gov (United States)

Helwig, Michael; Klinkenberg, Michael; Rusconi, Raffaella; Musgrove, Ruth E; Majbour, Nour K; El-Agnaf, Omar M A; Ulusoy, Ayse; Di Monte, Donato A

2016-03-01

Aggregation and neuron-to-neuron transmission are attributes of α-synuclein relevant to its pathogenetic role in human synucleinopathies such as Parkinson's disease. Intraparenchymal injections of fibrillar α-synuclein trigger widespread propagation of amyloidogenic protein species via mechanisms that require expression of endogenous α-synuclein and, possibly, its structural corruption by misfolded conformers acting as pathological seeds. Here we describe another paradigm of long-distance brain diffusion of α-synuclein that involves inter-neuronal transfer of monomeric and/or oligomeric species and is independent of recruitment of the endogenous protein. Targeted expression of human α-synuclein was induced in the mouse medulla oblongata through an injection of viral vectors into the vagus nerve. Enhanced levels of intra-neuronal α-synuclein were sufficient to initiate its caudo-rostral diffusion that likely involved at least one synaptic transfer and progressively reached specific brain regions such as the locus coeruleus, dorsal raphae and amygdala in the pons, midbrain and forebrain. Transfer of human α-synuclein was compared in two separate lines of α-synuclein-deficient mice versus their respective wild-type controls and, interestingly, lack of endogenous α-synuclein expression did not counteract diffusion but actually resulted in a more pronounced and advanced propagation of exogenous α-synuclein. Self-interaction of adjacent molecules of human α-synuclein was detected in both wild-type and mutant mice. In the former, interaction of human α-synuclein with mouse α-synuclein was also observed and might have contributed to differences in protein transmission. In wild-type and α-synuclein-deficient mice, accumulation of human α-synuclein within recipient axons in the pons, midbrain and forebrain caused morphological evidence of neuritic pathology. Tissue sections from the medulla oblongata and pons were stained with different antibodies recognizing

Data in support of the identification of neuronal and astrocyte proteins interacting with extracellularly applied oligomeric and fibrillar α-synuclein assemblies by mass spectrometry

Directory of Open Access Journals (Sweden)

Amulya Nidhi Shrivastava

2016-06-01

Full Text Available α-Synuclein (α-syn is the principal component of Lewy bodies, the pathophysiological hallmark of individuals affected by Parkinson disease (PD. This neuropathologic form of α-syn contributes to PD progression and propagation of α-syn assemblies between neurons. The data we present here support the proteomic analysis used to identify neuronal proteins that specifically interact with extracellularly applied oligomeric or fibrillar α-syn assemblies (conditions 1 and 2, respectively (doi: 10.15252/embj.201591397 [1]. α-syn assemblies and their cellular partner proteins were pulled down from neuronal cell lysed shortly after exposure to exogenous α-syn assemblies and the associated proteins were identified by mass spectrometry using a shotgun proteomic-based approach. We also performed experiments on pure cultures of astrocytes to identify astrocyte-specific proteins interacting with oligomeric or fibrillar α-syn (conditions 3 and 4, respectively. For each condition, proteins interacting selectively with α-syn assemblies were identified by comparison to proteins pulled-down from untreated cells used as controls. The mass spectrometry data, the database search and the peak lists have been deposited to the ProteomeXchange Consortium database via the PRIDE partner repository with the dataset identifiers PRIDE: http://www.ebi.ac.uk/pride/archive/projects/PXD002256 to PRIDE: http://www.ebi.ac.uk/pride/archive/projects/PXD002263 and doi: 10.6019/http://www.ebi.ac.uk/pride/archive/projects/PXD002256 to 10.6019/http://www.ebi.ac.uk/pride/archive/projects/PXD002263.

Mechanism of sliding friction on a film-terminated fibrillar interface.

Science.gov (United States)

Shen, Lulin; Jagota, Anand; Hui, Chung-Yuen

2009-03-03

We study the mechanism of sliding friction on a film-terminated fibrillar interface. It has been shown that static friction increases significantly with increasing spacing between fibrils, and with increasing rate of loading. However, surprisingly, the sliding friction remains substantially unaffected both by geometry and by the rate of loading. The presence of the thin terminal film is a controlling factor in determining the sliding friction. Experimentally, and by a simple model in which the indenter is held up by the tension in the thin film, we show how the indenter maintains a nearly constant contact area that is independent of the fibril spacing, resulting in constant sliding friction. By this mechanism, using the film-terminated structure, one can enhance the static friction without affecting the sliding behavior.

Fibrillar Structure and Charge Determine the Interaction of Polyglutamine Protein Aggregates with the Cell Surface*

Science.gov (United States)

Trevino, R. Sean; Lauckner, Jane E.; Sourigues, Yannick; Pearce, Margaret M.; Bousset, Luc; Melki, Ronald; Kopito, Ron R.

2012-01-01

The pathogenesis of most neurodegenerative diseases, including transmissible diseases like prion encephalopathy, inherited disorders like Huntington disease, and sporadic diseases like Alzheimer and Parkinson diseases, is intimately linked to the formation of fibrillar protein aggregates. It is becoming increasingly appreciated that prion-like intercellular transmission of protein aggregates can contribute to the stereotypical spread of disease pathology within the brain, but the mechanisms underlying the binding and uptake of protein aggregates by mammalian cells are largely uninvestigated. We have investigated the properties of polyglutamine (polyQ) aggregates that endow them with the ability to bind to mammalian cells in culture and the properties of the cell surface that facilitate such uptake. Binding and internalization of polyQ aggregates are common features of mammalian cells and depend upon both trypsin-sensitive and trypsin-resistant saturable sites on the cell surface, suggesting the involvement of cell surface proteins in this process. polyQ aggregate binding depends upon the presence of a fibrillar amyloid-like structure and does not depend upon electrostatic interaction of fibrils with the cell surface. Sequences in the huntingtin protein that flank the amyloid-forming polyQ tract also influence the extent to which aggregates are able to bind to cell surfaces. PMID:22753412

Electron Microscopy Analysis of the Nucleolus of Trypanosoma cruzi

Science.gov (United States)

López-Velázquez, Gabriel; Hernández, Roberto; López-Villaseñor, Imelda; Reyes-Vivas, Horacio; Segura-Valdez, María De L.; Jiménez-García, Luis F.

2005-08-01

The nucleolus is the main site for synthesis and processing of ribosomal RNA in eukaryotes. In mammals, plants, and yeast the nucleolus has been extensively characterized by electron microscopy, but in the majority of the unicellular eukaryotes no such studies have been performed. Here we used ultrastructural cytochemical and immunocytochemical techniques as well as three-dimensional reconstruction to analyze the nucleolus of Trypanosoma cruzi, which is an early divergent eukaryote of medical importance. In T. cruzi epimastigotes the nucleolus is a spherical intranuclear ribonucleoprotein organelle localized in a relatively central position within the nucleus. Dense fibrillar and granular components but not fibrillar centers were observed. In addition, nuclear bodies resembling Cajal bodies were observed associated to the nucleolus in the surrounding nucleoplasm. Our results provide additional morphological data to better understand the synthesis and processing of the ribosomal RNA in kinetoplastids.

Statistical mechanics of dense plasmas: numerical simulation and theory

International Nuclear Information System (INIS)

DeWitt, H.E.

1977-10-01

Recent Monte Carlo calculations from Paris and from Livermore for dense one and two component plasmas have led to systematic and accurate results for the thermodynamic properties of dense Coulombic fluids. This talk will summarize the results of these numerical experiments, and the simple analytic expressions for the equation of state and other thermodynamic functions that have been obtained. The thermal energy for the one component plasma has a simple power law dependence on temperature that is identical to Monte Carlo results on strongly coupled fluids governed by l/r/sup n/ potentials. A universal model for fluids governed by simple repulsive forces is suggested. For two component plasmas the ion-sphere model is shown to accurately reproduce the Monte Carlo data for the static portion of the energy. Electron screening is included using the Lindhard dielectric function and linear response theory. Free energy expressions have been constructed for one and two component plasmas that allow easy computation of all thermodynamic functions

Intracellular Calreticulin Regulates Multiple Steps in Fibrillar Collagen Expression, Trafficking, and Processing into the Extracellular Matrix*

OpenAIRE

Van Duyn Graham, Lauren; Sweetwyne, Mariya T.; Pallero, Manuel A.; Murphy-Ullrich, Joanne E.

2009-01-01

Calreticulin (CRT), a chaperone and Ca2+ regulator, enhances wound healing, and its expression correlates with fibrosis in animal models, suggesting that CRT regulates production of the extracellular matrix. However, direct regulation of collagen matrix by CRT has not been previously demonstrated. We investigated the role of CRT in the regulation of fibrillar collagen expression, secretion, processing, and deposition in the extracellular matrix by fibroblasts. Mouse embryonic fibroblasts defi...

Cellulose fibres, nanofibrils and microfibrils: The morphological sequence of MFC components from a plant physiology and fibre technology point of view

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Chinga-Carrasco Gary

2011-01-01

Full Text Available Abstract During the last decade, major efforts have been made to develop adequate and commercially viable processes for disintegrating cellulose fibres into their structural components. Homogenisation of cellulose fibres has been one of the principal applied procedures. Homogenisation has produced materials which may be inhomogeneous, containing fibres, fibres fragments, fibrillar fines and nanofibrils. The material has been denominated microfibrillated cellulose (MFC. In addition, terms relating to the nano-scale have been given to the MFC material. Several modern and high-tech nano-applications have been envisaged for MFC. However, is MFC a nano-structure? It is concluded that MFC materials may be composed of (1 nanofibrils, (2 fibrillar fines, (3 fibre fragments and (4 fibres. This implies that MFC is not necessarily synonymous with nanofibrils, microfibrils or any other cellulose nano-structure. However, properly produced MFC materials contain nano-structures as a main component, i.e. nanofibrils.

Cellulose fibres, nanofibrils and microfibrils: The morphological sequence of MFC components from a plant physiology and fibre technology point of view.

Science.gov (United States)

Chinga-Carrasco, Gary

2011-06-13

During the last decade, major efforts have been made to develop adequate and commercially viable processes for disintegrating cellulose fibres into their structural components. Homogenisation of cellulose fibres has been one of the principal applied procedures. Homogenisation has produced materials which may be inhomogeneous, containing fibres, fibres fragments, fibrillar fines and nanofibrils. The material has been denominated microfibrillated cellulose (MFC). In addition, terms relating to the nano-scale have been given to the MFC material. Several modern and high-tech nano-applications have been envisaged for MFC. However, is MFC a nano-structure? It is concluded that MFC materials may be composed of (1) nanofibrils, (2) fibrillar fines, (3) fibre fragments and (4) fibres. This implies that MFC is not necessarily synonymous with nanofibrils, microfibrils or any other cellulose nano-structure. However, properly produced MFC materials contain nano-structures as a main component, i.e. nanofibrils.

Fibril specific, conformation dependent antibodies recognize a generic epitope common to amyloid fibrils and fibrillar oligomers that is absent in prefibrillar oligomers

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Rasool Suhail

2007-09-01

Full Text Available Abstract Background Amyloid-related degenerative diseases are associated with the accumulation of misfolded proteins as amyloid fibrils in tissue. In Alzheimer disease (AD, amyloid accumulates in several distinct types of insoluble plaque deposits, intracellular Aβ and as soluble oligomers and the relationships between these deposits and their pathological significance remains unclear. Conformation dependent antibodies have been reported that specifically recognize distinct assembly states of amyloids, including prefibrillar oligomers and fibrils. Results We immunized rabbits with a morphologically homogeneous population of Aβ42 fibrils. The resulting immune serum (OC specifically recognizes fibrils, but not random coil monomer or prefibrillar oligomers, indicating fibrils display a distinct conformation dependent epitope that is absent in prefibrillar oligomers. The fibril epitope is also displayed by fibrils of other types of amyloids, indicating that the epitope is a generic feature of the polypeptide backbone. The fibril specific antibody also recognizes 100,000 × G soluble fibrillar oligomers ranging in size from dimer to greater than 250 kDa on western blots. The fibrillar oligomers recognized by OC are immunologically distinct from prefibrillar oligomers recognized by A11, even though their sizes overlap broadly, indicating that size is not a reliable indicator of oligomer conformation. The immune response to prefibrillar oligomers and fibrils is not sequence specific and antisera of the same specificity are produced in response to immunization with islet amyloid polypeptide prefibrillar oligomer mimics and fibrils. The fibril specific antibodies stain all types of amyloid deposits in human AD brain. Diffuse amyloid deposits stain intensely with anti-fibril antibody although they are thioflavin S negative, suggesting that they are indeed fibrillar in conformation. OC also stains islet amyloid deposits in transgenic mouse models of type

An essential nuclear protein in trypanosomes is a component of mRNA transcription/export pathway.

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Mariana Serpeloni

Full Text Available In eukaryotic cells, different RNA species are exported from the nucleus via specialized pathways. The mRNA export machinery is highly integrated with mRNA processing, and includes a different set of nuclear transport adaptors as well as other mRNA binding proteins, RNA helicases, and NPC-associated proteins. The protozoan parasite Trypanosoma cruzi is the causative agent of Chagas disease, a widespread and neglected human disease which is endemic to Latin America. Gene expression in Trypanosoma has unique characteristics, such as constitutive polycistronic transcription of protein-encoding genes and mRNA processing by trans-splicing. In general, post-transcriptional events are the major points for regulation of gene expression in these parasites. However, the export pathway of mRNA from the nucleus is poorly understood. The present study investigated the function of TcSub2, which is a highly conserved protein ortholog to Sub2/ UAP56, a component of the Transcription/Export (TREX multiprotein complex connecting transcription with mRNA export in yeast/human. Similar to its orthologs, TcSub2 is a nuclear protein, localized in dispersed foci all over the nuclei -except the fibrillar center of nucleolus- and at the interface between dense and non-dense chromatin areas, proposing the association of TcSub2 with transcription/processing sites. These findings were analyzed further by BrUTP incorporation assays and confirmed that TcSub2 is physically associated with active RNA polymerase II (RNA pol II, but not RNA polymerase I (RNA pol I or Spliced Leader (SL transcription, demonstrating participation particularly in nuclear mRNA metabolism in T. cruzi. The double knockout of the TcSub2 gene is lethal in T. cruzi, suggesting it has an essential function. Alternatively, RNA interference assays were performed in Trypanosoma brucei. It allowed demonstrating that besides being an essential protein, its knockdown causes mRNA accumulation in the nucleus and

Fibrillar polyaniline/diatomite composite synthesized by one-step in situ polymerization method

International Nuclear Information System (INIS)

Li Xingwei; Li Xiaoxuan; Wang Gengchao

2005-01-01

A fibrillar polyaniline/diatomite composite was prepared by one-step in situ polymerization of aniline in the dispersed system of diatomite, and was characterized via Fourier-transform infrared spectra (FT-IR), UV-vis-NIR spectra, wide-angle X-ray diffraction (WXRD), thermogravimetric analysis (TGA) and transmission electron microscopy (TEM), as well as conductivity. Morphology of the composite is uniform nanofibers, which the diameters of nanofibers are about 50-80 nm. The conductivity of polyaniline/diatomite composite contained 28% polyaniline is 0.29 S cm -1 at 25 deg. C, and temperature of thermal degradation has reached 493 deg. C in air. The composite has potential commercial applications as fillers for electromagnetic shielding materials and conductive coatings

Cytochemical study of the nucleolus of the slime mold Dictyostelium discoideum

International Nuclear Information System (INIS)

Benichou, J.C.; Quiviger, B.; Ryter, A.

1983-01-01

The nucleus of the slime mold Dictyostelium discoideum is characterized by the presence of several large dense masses which are all in tight contact with the nuclear membrane. These dense masses, considered as nucleoli, present a rather homogeneous texture, in which dense chromatin, fibrillar, and granular material are not easily detected. The autoradiographic study of [ 3 H]uridine pulse-labeled cells showed that the majority of the silver grains were located inside these masses. The use of EDTA regressive-staining, acetylation and enzymatic digestion indicated that they are mostly composed of RNP and are totally devoid of dense chromatin as the rest of the nucleus is. After treatment with actinomycin D, fibrillar and granular material segregated but no chromatin could be found. All these observations confirmed that the dense masses correspond to nucleoli despite their peculiar ultrastructure. It can also be concluded that this type of nucleoli cannot be considered as a taxonomic character of the slime molds because it does not exist in all slime molds and was observed in some dinoflagellates, and ascomycetes

Geometrical optics of dense aerosols: forming dense plasma slabs.

Science.gov (United States)

Hay, Michael J; Valeo, Ernest J; Fisch, Nathaniel J

2013-11-01

Assembling a freestanding, sharp-edged slab of homogeneous material that is much denser than gas, but much more rarefied than a solid, is an outstanding technological challenge. The solution may lie in focusing a dense aerosol to assume this geometry. However, whereas the geometrical optics of dilute aerosols is a well-developed field, the dense aerosol limit is mostly unexplored. Yet controlling the geometrical optics of dense aerosols is necessary in preparing such a material slab. Focusing dense aerosols is shown here to be possible, but the finite particle density reduces the effective Stokes number of the flow, a critical result for controlled focusing.

Reference: 481 [Arabidopsis Phenome Database[Archive

Lifescience Database Archive (English)

Full Text Available Frederic et al. 2007 Feb. Mol. Biol. Cell 18(2):369-79. Nucleolin is one of the most abundant protein in the nucleolus...t defects. AtNUC-L1 is localized in the nucleolus, mainly in the dense fibrillar ...component. Absence of this protein in Atnuc-L1 plants induces nucleolar disorganization, nucleolus organizer...th a disrupted nucleolin-like gene and defines a new role for nucleolin in nucleolus structure and rDNA chro...matin organization. Characterization of AtNUC-L1 reveals a central role of nucleolin in nucleolus organizati

Conformational targeting of fibrillar polyglutamine proteins in live cells escalates aggregation and cytotoxicity.

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Erik Kvam

2009-05-01

Full Text Available Misfolding- and aggregation-prone proteins underlying Parkinson's, Huntington's and Machado-Joseph diseases, namely alpha-synuclein, huntingtin, and ataxin-3 respectively, adopt numerous intracellular conformations during pathogenesis, including globular intermediates and insoluble amyloid-like fibrils. Such conformational diversity has complicated research into amyloid-associated intracellular dysfunction and neurodegeneration. To this end, recombinant single-chain Fv antibodies (scFvs are compelling molecular tools that can be selected against specific protein conformations, and expressed inside cells as intrabodies, for investigative and therapeutic purposes.Using atomic force microscopy (AFM and live-cell fluorescence microscopy, we report that a human scFv selected against the fibrillar form of alpha-synuclein targets isomorphic conformations of misfolded polyglutamine proteins. When expressed in the cytoplasm of striatal cells, this conformation-specific intrabody co-localizes with intracellular aggregates of misfolded ataxin-3 and a pathological fragment of huntingtin, and enhances the aggregation propensity of both disease-linked polyglutamine proteins. Using this intrabody as a tool for modulating the kinetics of amyloidogenesis, we show that escalating aggregate formation of a pathologic huntingtin fragment is not cytoprotective in striatal cells, but rather heightens oxidative stress and cell death as detected by flow cytometry. Instead, cellular protection is achieved by suppressing aggregation using a previously described intrabody that binds to the amyloidogenic N-terminus of huntingtin. Analogous cytotoxic results are observed following conformational targeting of normal or polyglutamine-expanded human ataxin-3, which partially aggregate through non-polyglutamine domains.These findings validate that the rate of aggregation modulates polyglutamine-mediated intracellular dysfunction, and caution that molecules designed to

One-step derivation of mesenchymal stem cell (MSC-like cells from human pluripotent stem cells on a fibrillar collagen coating.

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Yongxing Liu

Full Text Available Controlled differentiation of human embryonic stem cells (hESCs and induced pluripotent stem cells (iPSCs into cells that resemble adult mesenchymal stem cells (MSCs is an attractive approach to obtain a readily available source of progenitor cells for tissue engineering. The present study reports a new method to rapidly derive MSC-like cells from hESCs and hiPSCs, in one step, based on culturing the cells on thin, fibrillar, type I collagen coatings that mimic the structure of physiological collagen. Human H9 ESCs and HDFa-YK26 iPSCs were singly dissociated in the presence of ROCK inhibitor Y-27632, plated onto fibrillar collagen coated plates and cultured in alpha minimum essential medium (alpha-MEM supplemented with 10% fetal bovine serum, 50 uM magnesium L-ascorbic acid phosphate and 100 nM dexamethasone. While fewer cells attached on the collagen surface initially than standard tissue culture plastic, after culturing for 10 days, resilient colonies of homogenous spindle-shaped cells were obtained. Flow cytometric analysis showed that a high percentage of the derived cells expressed typical MSC surface markers including CD73, CD90, CD105, CD146 and CD166 and were negative as expected for hematopoietic markers CD34 and CD45. The MSC-like cells derived from pluripotent cells were successfully differentiated in vitro into three different lineages: osteogenic, chondrogenic, and adipogenic. Both H9 hES and YK26 iPS cells displayed similar morphological changes during the derivation process and yielded MSC-like cells with similar properties. In conclusion, this study demonstrates that bioimimetic, fibrillar, type I collagen coatings applied to cell culture plates can be used to guide a rapid, efficient derivation of MSC-like cells from both human ES and iPS cells.

Novel Ribonuclease Activity Differs between Fibrillarins from Arabidopsis thaliana

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Ulises Rodriguez-Corona

2017-10-01

Full Text Available Fibrillarin is one of the most important nucleolar proteins that have been shown as essential for life. Fibrillarin localizes primarily at the periphery between fibrillar center and dense fibrillar component as well as in Cajal bodies. In most plants there are at least two different genes for fibrillarin. In Arabidopsis thaliana both genes show high level of expression in transcriptionally active cells. Here, we focus on two important differences between A. thaliana fibrillarins. First and most relevant is the enzymatic activity by AtFib2. The AtFib2 shows a novel ribonuclease activity that is not seen with AtFib1. Second is a difference in the ability to interact with phosphoinositides and phosphatidic acid between both proteins. We also show that the novel ribonuclease activity as well as the phospholipid binding region of fibrillarin is confine to the GAR domain. The ribonuclease activity of fibrillarin reveals in this study represents a new role for this protein in rRNA processing.

Organization of the nucleoli of soybean root meristematic cells at different states of their activity.

Science.gov (United States)

Stepiński, Dariusz

2010-06-01

Internal organization of a nucleolus changes along with rRNA transcriptional activity. These changes mainly concern qualitative and quantitative alternations of three main nucleolar components: fibrillar centres (FC), dense fibrillar component (DFC) and granular component (GC). In the present work quantitative measurements of the number and sizes of FCs and DFCs in nucleoli of root meristematic cells of soybean seedlings grown at (1) chilling conditions that reduce transcriptional activity of soybean nucleoli (temp. of 10 degrees C) and at (2) conditions that increase this activity (recovery at optimal temp. of 25 degrees C after previous chilling), even more than (3) the control, have been carried out. Morphometric measurements showed that the highest number of FCs and DFCs was in the most active nucleoli, while the smallest number - in those with the lowest activity. The average size of an individual FC was similar in all nucleoli regardless of their transcriptional activity, that of the individual DFC varied, being bigger in the nucleoli of the chilled plants and smallest in those of the recovered plants. The numbers of FCs and DFCs seem to be indicators of transcriptional activity of plant nucleoli - the higher number of FCs and DFCs the more active nucleoli. Copyright 2009 Elsevier Ltd. All rights reserved.

Reproduction of the FC/DFC units in nucleoli.

Science.gov (United States)

Smirnov, Evgeny; Hornáček, Matúš; Kováčik, Lubomír; Mazel, Tomáš; Schröfel, Adam; Svidenská, Silvie; Skalníková, Magdalena; Bartová, Eva; Cmarko, Dušan; Raška, Ivan

2016-04-25

The essential structural components of the nucleoli, Fibrillar Centers (FC) and Dense Fibrillar Components (DFC), together compose FC/DFC units, loci of rDNA transcription and early RNA processing. In the present study we followed cell cycle related changes of these units in 2 human sarcoma derived cell lines with stable expression of RFP-PCNA (the sliding clamp protein) and GFP-RPA43 (a subunit of RNA polymerase I, pol I) or GFP-fibrillarin. Correlative light and electron microscopy analysis showed that the pol I and fibrillarin positive nucleolar beads correspond to individual FC/DFC units. In vivo observations showed that at early S phase, when transcriptionally active ribosomal genes were replicated, the number of the units in each cell increased by 60-80%. During that period the units transiently lost pol I, but not fibrillarin. Then, until the end of interphase, number of the units did not change, and their duplication was completed only after the cell division, by mid G1 phase. This peculiar mode of reproduction suggests that a considerable subset of ribosomal genes remain transcriptionally silent from mid S phase to mitosis, but become again active in the postmitotic daughter cells.

Effect of rate on adhesion and static friction of a film-terminated fibrillar interface.

Science.gov (United States)

Vajpayee, Shilpi; Long, Rong; Shen, Lulin; Jagota, Anand; Hui, Chung-Yuen

2009-03-03

A film-terminated fibrillar interface has been shown to result in significant enhancement of adhesion and static friction compared to a flat control. This enhancement increases with interfibril spacing. In this, the first of a two-part study, by studying the effect of rate on adhesion and static friction, we show that both adhesion and static friction enhancement are due to a crack-trapping mechanism. For adhesion, as measured by an indentation experiment, an analytical model is used to relate the applied indenter displacement rate and measured forces to contact line velocity and energy release rate, respectively. The two mechanisms for adhesion enhancement--varying rate and crack-trapping--are found to be coupled multiplicatively.

Methylation of nucleolar RNA in HeLa cells studied by autoradiography

International Nuclear Information System (INIS)

Cervera, J.; Martinez, A.; Renau-Piqueras, J.

1984-01-01

Methylation of nucleolar RNA was studied by autoradiography in HeLa cells using L-[methyl- 3 H]methionine and S-adenosyl-L-[methyl- 3 H]methionine as radioactive precursors. Pulse-labeling experiments show that nucleolar RNA methylation occurs on the newly synthesized RNA at the nucleolar fibrillar RNP component and mostly on the fibrillar ring of fibrillar centers, where pre-rRNA is being synthesized. Pulse-chase experiments show a shift of silver grains from the nucleolar fibrillar RNP component to the nucleolar granular component first and then to the cytoplasm. Labeling of nucleolar RNA via specific methylation permits the study of intranucleolar processing of pre-rRNA and confirms the sequence of labeling of the two nucleolar RNP components observed with radioactive uridine

Effect of LOS/NLOS Propagation on 5G Ultra-Dense Networks

DEFF Research Database (Denmark)

Galiotto, Carlo; Pratas, Nuno; Doyle, Linda

2017-01-01

The combined presence of Line-of-Sight (LOS) and Non-Line-of-Sight (NLOS) components in the radio propagation environment can severely degrade the Ultra-Dense Networks (UDNs) performance. Backed by a stochastic geometry model, we show that when the LOS/NLOS propagation components are taken into a...... and to take advantage of extreme cell densification in the upcoming 5G wireless networks....

Cell-mediated fibre recruitment drives extracellular matrix mechanosensing in engineered fibrillar microenvironments

Science.gov (United States)

Baker, Brendon M.; Trappmann, Britta; Wang, William Y.; Sakar, Mahmut S.; Kim, Iris L.; Shenoy, Vivek B.; Burdick, Jason A.; Chen, Christopher S.

2015-12-01

To investigate how cells sense stiffness in settings structurally similar to native extracellular matrices, we designed a synthetic fibrous material with tunable mechanics and user-defined architecture. In contrast to flat hydrogel surfaces, these fibrous materials recapitulated cell-matrix interactions observed with collagen matrices including stellate cell morphologies, cell-mediated realignment of fibres, and bulk contraction of the material. Increasing the stiffness of flat hydrogel surfaces induced mesenchymal stem cell spreading and proliferation; however, increasing fibre stiffness instead suppressed spreading and proliferation for certain network architectures. Lower fibre stiffness permitted active cellular forces to recruit nearby fibres, dynamically increasing ligand density at the cell surface and promoting the formation of focal adhesions and related signalling. These studies demonstrate a departure from the well-described relationship between material stiffness and spreading established with hydrogel surfaces, and introduce fibre recruitment as a previously undescribed mechanism by which cells probe and respond to mechanics in fibrillar matrices.

Densely Ionizing Radiation Effects on the Microenvironment Promote Aggressive Trp53 Null Mammary Carcinomas

Data.gov (United States)

National Aeronautics and Space Administration — Densely ionizing radiation is a major component of the space radiation environment and has potentially greater carcinogenic effect compared to sparsely ionizing...

3D collagen fibrillar microstructure guides pancreatic cancer cell phenotype and serves as a critical design parameter for phenotypic models of EMT.

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T J Puls

Full Text Available Pancreatic cancer, one of the deadliest cancers, is characterized by high rates of metastasis and intense desmoplasia, both of which are associated with changes in fibrillar type I collagen composition and microstructure. Epithelial to mesenchymal transition (EMT, a critical step of metastasis, also involves a change in extracellular matrix (ECM context as cells detach from basement membrane (BM and engage interstitial matrix (IM. The objective of this work was to develop and apply an in-vitro three-dimensional (3D tumor-ECM model to define how ECM composition and biophysical properties modulate pancreatic cancer EMT. Three established pancreatic ductal adenocarcinoma (PDAC lines were embedded within 3D matrices prepared with type I collagen Oligomer (IM at various fibril densities to control matrix stiffness or Oligomer and Matrigel combined at various ratios while maintaining constant matrix stiffness. Evaluation of cell morphology and protein expression at both the cellular- and population-levels revealed a spectrum of matrix-driven EMT phenotypes that were dependent on ECM composition and architecture as well as initial PDAC phenotype. In general, exposure to fibrillar IM was sufficient to drive EMT, with cells displaying spindle-shaped morphology and mesenchymal markers, and non-fibrillar BM promoted more epithelial behavior. When cultured within low density Oligomer, only a subpopulation of epithelial BxPC-3 cells displayed EMT while mesenchymal MiaPaCa-2 cells displayed more uniform spindle-shaped morphologies and mesenchymal marker expression. Interestingly, as IM fibril density increased, associated changes in spatial constraints and matrix stiffness resulted in all PDAC lines growing as tight clusters; however mesenchymal marker expression was maintained. Collectively, the comparison of these results to other in-vitro tumor models highlights the role of IM fibril microstructure in guiding EMT heterogeneity and showcases the potential

Selecting the Number of Principal Components in Functional Data

KAUST Repository

Li, Yehua

2013-12-01

Functional principal component analysis (FPCA) has become the most widely used dimension reduction tool for functional data analysis. We consider functional data measured at random, subject-specific time points, contaminated with measurement error, allowing for both sparse and dense functional data, and propose novel information criteria to select the number of principal component in such data. We propose a Bayesian information criterion based on marginal modeling that can consistently select the number of principal components for both sparse and dense functional data. For dense functional data, we also develop an Akaike information criterion based on the expected Kullback-Leibler information under a Gaussian assumption. In connecting with the time series literature, we also consider a class of information criteria proposed for factor analysis of multivariate time series and show that they are still consistent for dense functional data, if a prescribed undersmoothing scheme is undertaken in the FPCA algorithm. We perform intensive simulation studies and show that the proposed information criteria vastly outperform existing methods for this type of data. Surprisingly, our empirical evidence shows that our information criteria proposed for dense functional data also perform well for sparse functional data. An empirical example using colon carcinogenesis data is also provided to illustrate the results. Supplementary materials for this article are available online. © 2013 American Statistical Association.

Contact compliance effects in the frictional response of bioinspired fibrillar adhesives

Science.gov (United States)

Piccardo, Marco; Chateauminois, Antoine; Fretigny, Christian; Pugno, Nicola M.; Sitti, Metin

2013-01-01

The shear failure and friction mechanisms of bioinspired adhesives consisting of elastomer arrays of microfibres terminated by mushroom-shaped tips are investigated in contact with a rigid lens. In order to reveal the interplay between the vertical and lateral loading directions, experiments are carried out using a custom friction set-up in which normal stiffness can be made either high or low when compared with the stiffness of the contact between the fibrillar adhesive and the lens. Using in situ contact imaging, the shear failure of the adhesive is found to involve two successive mechanisms: (i) cavitation and peeling at the contact interface between the mushroom-shaped fibre tip endings and the lens; and (ii) side re-adhesion of the fibre's stem to the lens. The extent of these mechanisms and their implications regarding static friction forces is found to depend on the crosstalk between the normal and lateral loading directions that can result in contact instabilities associated with fibre buckling. In addition, the effects of the viscoelastic behaviour of the polyurethane material on the rate dependence of the shear response of the adhesive are accounted for. PMID:23554349

Toward Superior Capacitive Energy Storage: Recent Advances in Pore Engineering for Dense Electrodes.

Science.gov (United States)

Liu, Congcong; Yan, Xiaojun; Hu, Fei; Gao, Guohua; Wu, Guangming; Yang, Xiaowei

2018-04-01

With the rapid development of mobile electronics and electric vehicles, future electrochemical capacitors (ECs) need to store as much energy as possible in a rather limited space. As the core component of ECs, dense electrodes that have a high volumetric energy density and superior rate capability are the key to achieving improved energy storage. Here, the significance of and recent progress in the high volumetric performance of dense electrodes are presented. Furthermore, dense yet porous electrodes, as the critical precondition for realizing superior electrochemical capacitive energy, have become a scientific challenge and an attractive research focus. From a pore-engineering perspective, insight into the guidelines of engineering the pore size, connectivity, and wettability is provided to design dense electrodes with different porous architectures toward high-performance capacitive energy storage. The current challenges and future opportunities toward dense electrodes are discussed and include the construction of an orderly porous structure with an appropriate gradient, the coupling of pore sizes with the solvated cations and anions, and the design of coupled pores with diverse electrolyte ions. © 2018 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Predicting diffusivities in dense fluid mixtures

Directory of Open Access Journals (Sweden)

C. DARIVA

1999-09-01

Full Text Available In this work the Enskog solution of the Boltzmann equation, as corrected by Speedy, together with the Weeks-Chandler-Andersen (WCA perturbation theory of liquids is employed in correlating and predicting self-diffusivities of dense fluids. Afterwards this theory is used to estimate mutual diffusion coefficients of solutes at infinite dilution in sub and supercritical solvents. We have also investigated the behavior of Fick diffusion coefficients in the proximity of a binary vapor-liquid critical point since this subject is of great interest for extraction purposes. The approach presented here, which makes use of a density and temperature dependent hard-sphere diameter, is shown to be excellent for predicting diffusivities in dense pure fluids and fluid mixtures. The calculations involved highly nonideal mixtures as well as systems with high molecular asymmetry. The predicted diffusivities are in good agreement with the experimental data for the pure and binary systems. The methodology proposed here makes only use of pure component information and density of mixtures. The simple algebraic relations are proposed without any binary adjustable parameters and can be readily used for estimating diffusivities in multicomponent mixtures.

Astrophysical Nuclear Reaction Rates in the Dense Metallic Environments

Science.gov (United States)

Kilic, Ali Ihsan

2017-09-01

Nuclear reaction rates can be enhanced by many orders of magnitude in dense and relatively cold astrophysical plasmas such as in white dwarfs, brown dwarfs, and giant planets. Similar conditions are also present in supernova explosions where the ignition conditions are vital for cosmological models. White dwarfs are compact objects that have both extremely high interior densities and very strong local magnetic fields. For the first time, a new formula has been developed to explain cross section and reaction rate quantities for light elements that includes not only the nuclear component but also the material dependence, magnetic field, and crystal structure dependency in dense metallic environments. I will present the impact of the developed formula on the cross section and reaction rates for light elements. This could have possible technological applications in energy production using nuclear fusion reactions.

Neutrino interactions in hot and dense matter

International Nuclear Information System (INIS)

Reddy, S.; Prakash, M.; Lattimer, J.M.

1998-01-01

We study the charged and neutral current weak interaction rates relevant for the determination of neutrino opacities in dense matter found in supernovae and neutron stars. We establish an efficient formalism for calculating differential cross sections and mean free paths for interacting, asymmetric nuclear matter at arbitrary degeneracy. The formalism is valid for both charged and neutral current reactions. Strong interaction corrections are incorporated through the in-medium single particle energies at the relevant density and temperature. The effects of strong interactions on the weak interaction rates are investigated using both potential and effective field-theoretical models of matter. We investigate the relative importance of charged and neutral currents for different astrophysical situations, and also examine the influence of strangeness-bearing hyperons. Our findings show that the mean free paths are significantly altered by the effects of strong interactions and the multi-component nature of dense matter. The opacities are then discussed in the context of the evolution of the core of a protoneutron star. copyright 1998 The American Physical Society

Single-shot optical conductivity measurement of dense aluminum plasmas

International Nuclear Information System (INIS)

Churina, I. V.; Cho, B.-I.; Bernstein, A.; Stoker, D. S.; Dalton, A.; Symes, D. R.; Ditmire, T.

2009-01-01

The optical conductivity of a dense femtosecond laser-heated aluminum plasma heated to 0.1-1.5 eV was measured using frequency-domain interferometry with chirped pulses, permitting simultaneous observation of optical probe reflectivity and probe pulse phase shift. Coupled with published models of bound-electron contributions to the conductivity, these two independent experimental data yielded a direct measurement of both real and imaginary components of the plasma conductivity.

Preparation of UO2 dense spherical particles by sol-gel technique

International Nuclear Information System (INIS)

Urbanek, V.; Dolezal, J.

1977-01-01

The results of the basic research and development of processes of preparation of dense UO 2 spherical particles by sol-gel technique are presented. Attention was paid to the study of chemistry of internal gelation step in the uranylnitrate-urea-hexamethylentetramine system. The existence regions of several stable gels with different properties were established in connection with variable ratio of basic gel's components and the appropriate ''Phase diagrams'' were drawn. From these diagrams, two of the most interesting types of uranyl gels were chosen for the subsequent thermal processing which included drying, reduction and sintering. The detailed studies of each step of the whole process enabled preparation of UO 2 dense spheres with well defined microstructure

Simultaneous Changes of Spatial Memory and Spine Density after Intrahippocampal Administration of Fibrillar Aβ 1–42 to the Rat Brain

OpenAIRE

Borbély, Emőke; Horváth, János; Furdan, Szabina; Bozsó, Zsolt; Penke, Botond; Fülöp, Lívia

2014-01-01

Several animal models of Alzheimer's disease have been used in laboratory experiments. Intrahippocampal injection of fibrillar amyloid-beta (fAβ) peptide represents one of the most frequently used models, mimicking Aβ deposits in the brain. In our experiment synthetic fAβ 1–42 peptide was administered to rat hippocampus. The effect of the Aβ peptide on spatial memory and dendritic spine density was studied. The fAβ 1–42-treated rats showed decreased spatial learning ability measured in Morris...

Calculation of Transport Coefficients in Dense Plasma Mixtures

Science.gov (United States)

Haxhimali, T.; Cabot, W. H.; Caspersen, K. J.; Greenough, J.; Miller, P. L.; Rudd, R. E.; Schwegler, E. R.

2011-10-01

We use classical molecular dynamics (MD) to estimate species diffusivity and viscosity in mixed dense plasmas. The Yukawa potential is used to describe the screened Coulomb interaction between the ions. This potential has been used widely, providing the basis for models of dense stellar materials, inertial confined plasmas, and colloidal particles in electrolytes. We calculate transport coefficients in equilibrium simulations using the Green- Kubo relation over a range of thermodynamic conditions including the viscosity and the self - diffusivity for each component of the mixture. The interdiffusivity (or mutual diffusivity) can then be related to the self-diffusivities by using a generalization of the Darken equation. We have also employed non-equilibrium MD to estimate interdiffusivity during the broadening of the interface between two regions each with a high concentration of either species. Here we present results for an asymmetric mixture between Ar and H. These can easily be extended to other plasma mixtures. A main motivation for this study is to develop accurate transport models that can be incorporated into the hydrodynamic codes to study hydrodynamic instabilities. We use classical molecular dynamics (MD) to estimate species diffusivity and viscosity in mixed dense plasmas. The Yukawa potential is used to describe the screened Coulomb interaction between the ions. This potential has been used widely, providing the basis for models of dense stellar materials, inertial confined plasmas, and colloidal particles in electrolytes. We calculate transport coefficients in equilibrium simulations using the Green- Kubo relation over a range of thermodynamic conditions including the viscosity and the self - diffusivity for each component of the mixture. The interdiffusivity (or mutual diffusivity) can then be related to the self-diffusivities by using a generalization of the Darken equation. We have also employed non-equilibrium MD to estimate interdiffusivity during

Fluctuations of pol I and fibrillarin contents of the nucleoli.

Science.gov (United States)

Hornáček, M; Kováčik, L; Mazel, T; Cmarko, D; Bártová, E; Raška, I; Smirnov, E

2017-07-04

Nucleoli are formed on the basis of ribosomal DNA (rDNA) clusters called Nucleolus Organizer Regions (NORs). Each NOR contains multiple genes coding for RNAs of the ribosomal particles. The prominent components of the nucleolar ultrastructure, fibrillar centers (FC) and dense fibrillar components (DFC), together compose FC/DFC units. These units are centers of rDNA transcription by RNA polymerase I (pol I), as well as the early processing events, in which an essential role belongs to fibrillarin. Each FC/DFC unit probably corresponds to a single transcriptionally active gene. In this work, we transfected human-derived cells with GFP-RPA43 (subunit of pol I) and RFP-fibrillarin. Following changes of the fluorescent signals in individual FC/DFC units, we found two kinds of kinetics: 1) the rapid fluctuations with periods of 2-3 min, when the pol I and fibrillarin signals oscillated in anti-phase manner, and the intensities of pol I in the neighboring FC/DFC units did not correlate. 2) fluctuations with periods of 10 to 60 min, in which pol I and fibrillarin signals measured in the same unit did not correlate, but pol I signals in the units belonging to different nucleoli were synchronized. Our data indicate that a complex pulsing activity of transcription as well as early processing is common for ribosomal genes.

Non-uniform self-assembly: On the anisotropic architecture of α-synuclein supra-fibrillar aggregates.

Science.gov (United States)

Semerdzhiev, Slav A; Shvadchak, Volodymyr V; Subramaniam, Vinod; Claessens, Mireille M A E

2017-08-09

Although the function of biopolymer hydrogels in nature depends on structural anisotropy at mesoscopic length scales, the self-assembly of such anisotropic structures in vitro is challenging. Here we show that fibrils of the protein α-synuclein spontaneously self-assemble into structurally anisotropic hydrogel particles. While the fibrils in the interior of these supra-fibrillar aggregates (SFAs) are randomly oriented, the fibrils in the periphery prefer to cross neighboring fibrils at high angles. This difference in organization coincides with a significant difference in polarity of the environment in the central and peripheral parts of the SFA. We rationalize the structural anisotropy of SFAs in the light of the observation that αS fibrils bind a substantial amount of counterions. We propose that, with the progress of protein polymerization into fibrils, this binding of counterions changes the ionic environment which triggers a change in fibril organization resulting in anisotropy in the architecture of hydrogel particles.

Atoms in dense plasmas

International Nuclear Information System (INIS)

More, R.M.

1986-01-01

Recent experiments with high-power pulsed lasers have strongly encouraged the development of improved theoretical understanding of highly charged ions in a dense plasma environment. This work examines the theory of dense plasmas with emphasis on general rules which govern matter at extreme high temperature and density. 106 refs., 23 figs

Atoms in dense plasmas

Energy Technology Data Exchange (ETDEWEB)

More, R.M.

1986-01-01

Recent experiments with high-power pulsed lasers have strongly encouraged the development of improved theoretical understanding of highly charged ions in a dense plasma environment. This work examines the theory of dense plasmas with emphasis on general rules which govern matter at extreme high temperature and density. 106 refs., 23 figs.

Dense-gas dispersion advection-diffusion model

International Nuclear Information System (INIS)

Ermak, D.L.

1992-07-01

A dense-gas version of the ADPIC particle-in-cell, advection- diffusion model was developed to simulate the atmospheric dispersion of denser-than-air releases. In developing the model, it was assumed that the dense-gas effects could be described in terms of the vertically-averaged thermodynamic properties and the local height of the cloud. The dense-gas effects were treated as a perturbation to the ambient thermodynamic properties (density and temperature), ground level heat flux, turbulence level (diffusivity), and windfield (gravity flow) within the local region of the dense-gas cloud. These perturbations were calculated from conservation of energy and conservation of momentum principles along with the ideal gas law equation of state for a mixture of gases. ADPIC, which is generally run in conjunction with a mass-conserving wind flow model to provide the advection field, contains all the dense-gas modifications within it. This feature provides the versatility of coupling the new dense-gas ADPIC with alternative wind flow models. The new dense-gas ADPIC has been used to simulate the atmospheric dispersion of ground-level, colder-than-ambient, denser-than-air releases and has compared favorably with the results of field-scale experiments

Radiative-Transfer Modeling of Spectra of Densely Packed Particulate Media

Science.gov (United States)

Ito, G.; Mishchenko, M. I.; Glotch, T. D.

2017-12-01

Remote sensing measurements over a wide range of wavelengths from both ground- and space-based platforms have provided a wealth of data regarding the surfaces and atmospheres of various solar system bodies. With proper interpretations, important properties, such as composition and particle size, can be inferred. However, proper interpretation of such datasets can often be difficult, especially for densely packed particulate media with particle sizes on the order of wavelength of light being used for remote sensing. Radiative transfer theory has often been applied to the study of densely packed particulate media like planetary regoliths and snow, but with difficulty, and here we continue to investigate radiative transfer modeling of spectra of densely packed media. We use the superposition T-matrix method to compute scattering properties of clusters of particles and capture the near-field effects important for dense packing. Then, the scattering parameters from the T-matrix computations are modified with the static structure factor correction, accounting for the dense packing of the clusters themselves. Using these corrected scattering parameters, reflectance (or emissivity via Kirchhoff's Law) is computed with the method of invariance imbedding solution to the radiative transfer equation. For this work we modeled the emissivity spectrum of the 3.3 µm particle size fraction of enstatite, representing some common mineralogical and particle size components of regoliths, in the mid-infrared wavelengths (5 - 50 µm). The modeled spectrum from the T-matrix method with static structure factor correction using moderate packing densities (filling factors of 0.1 - 0.2) produced better fits to the laboratory measurement of corresponding spectrum than the spectrum modeled by the equivalent method without static structure factor correction. Future work will test the method of the superposition T-matrix and static structure factor correction combination for larger particles

Diamonds in dense molecular clouds - A challenge to the standard interstellar medium paradigm

Science.gov (United States)

Allamandola, L. J.; Sandford, S. A.; Tielens, A. G. G. M.; Herbst, T. M.

1993-01-01

Observations of a newly discovered infrared C-H stretching band indicate that interstellar diamond-like material appears to be characteristic of dense clouds. In sharp contrast, the spectral signature of dust in the diffuse interstellar medium is dominated by -CH2- and -CH3 groups. This dichotomy in the aliphatic organic component between the dense and diffuse media challenges standard assumptions about the processes occurring in, and interactions between, these two media. The ubiquity of this interstellar diamond-like material rules out models for meteoritic diamond formation in unusual circumstellar environments and implies that the formation of the diamond-like material is associated with common interstellar processes or stellar types.

Reiterated inclusions of dipoles in a dense plasma

International Nuclear Information System (INIS)

Naouri, Gerard

1983-01-01

This thesis introduces a simple model made up for the calculation of pressure effects in dense and partially ionized 3 D two component plasma. The technic used is the description of the overlapping of atomic orbitals by means of interacting dipoles incased in one another. By iteration of this procedure we get an effective two-body potential which allows us to calculate line shifts of hydrogenic ions. In conclusion we suggest a possible improvement of the method by substituting a self consistent potential to the Debye one for the calculation of the wave functions. [fr

FttC-Based Fronthaul for 5G Dense/Ultra-Dense Access Network: Performance and Costs in Realistic Scenarios

Directory of Open Access Journals (Sweden)

Franco Mazzenga

2017-10-01

Full Text Available One distinctive feature of the next 5G systems is the presence of a dense/ultra-dense wireless access network with a large number of access points (or nodes at short distances from each other. Dense/ultra-dense access networks allow for providing very high transmission capacity to terminals. However, the deployment of dense/ultra-dense networks is slowed down by the cost of the fiber-based infrastructure required to connect radio nodes to the central processing units and then to the core network. In this paper, we investigate the possibility for existing FttC access networks to provide fronthaul capabilities for dense/ultra-dense 5G wireless networks. The analysis is realistic in that it is carried out considering an actual access network scenario, i.e., the Italian FttC deployment. It is assumed that access nodes are connected to the Cabinets and to the corresponding distributors by a number of copper pairs. Different types of cities grouped in terms of population have been considered. Results focus on fronthaul transport capacity provided by the FttC network and have been expressed in terms of the available fronthaul bit rate per node and of the achievable coverage.

Flexible optical network components based on densely integrated microring resonators

NARCIS (Netherlands)

Geuzebroek, D.H.

2005-01-01

This thesis addresses the design, realization and characterization of reconfigurable optical network components based on multiple microring resonators. Since thermally tunable microring resonators can be used as wavelength selective space switches, very compact devices with high complexity and

Quantum dense key distribution

International Nuclear Information System (INIS)

Degiovanni, I.P.; Ruo Berchera, I.; Castelletto, S.; Rastello, M.L.; Bovino, F.A.; Colla, A.M.; Castagnoli, G.

2004-01-01

This paper proposes a protocol for quantum dense key distribution. This protocol embeds the benefits of a quantum dense coding and a quantum key distribution and is able to generate shared secret keys four times more efficiently than the Bennet-Brassard 1984 protocol. We hereinafter prove the security of this scheme against individual eavesdropping attacks, and we present preliminary experimental results, showing its feasibility

DENSE CLUMPS AND CANDIDATES FOR MOLECULAR OUTFLOWS IN W40

Energy Technology Data Exchange (ETDEWEB)

Shimoikura, Tomomi; Dobashi, Kazuhito [Department of Astronomy and Earth Sciences, Tokyo Gakugei University, Koganei, Tokyo 184-8501 (Japan); Nakamura, Fumitaka; Hara, Chihomi; Kawabe, Ryohei [National Astronomical Observatory of Japan, Mitaka, Tokyo 181-8588 (Japan); Tanaka, Tomohiro [Department of Physical Science, Osaka Prefecture University, Sakai, Osaka 599-8531 (Japan); Shimajiri, Yoshito [Laboratoire AIM, CEA/DSM-CNRS-Université Paris Diderot, IRFU/Service d’Astrophysique, CEA Saclay, F-91191 Gif-sur-Yvette (France); Sugitani, Kouji, E-mail: ikura@u-gakugei.ac.jp [Graduate School of Natural Sciences, Nagoya City University, Mizuho-ku, Nagoya 467-8501 (Japan)

2015-06-20

We report the results of the {sup 12}CO (J = 3−2) and HCO{sup +} (J = 4−3) observations of the W40 H ii region with the Atacama Submillimeter Telescope Experiment (ASTE) 10 m telescope (HPBW ≃ 22″) to search for molecular outflows and dense clumps. We found that the velocity field in the region is highly complex, consisting of at least four distinct velocity components at V{sub LSR} ≃ 3, 5, 7, and 10 km s{sup −1}. The ∼7 km s{sup −1} component represents the systemic velocity of cold gas surrounding the entire region, and causes heavy absorption in the {sup 12}CO spectra over the velocity range 6 ≲ V{sub LSR} ≲ 9 km s{sup −1}. The ∼5 and ∼10 km s{sup −1} components exhibit high {sup 12}CO temperature (≳40 K) and are found mostly around the H ii region, suggesting that these components are likely to be tracing dense gas interacting with the expanding shell around the H ii region. Based on the {sup 12}CO data, we identified 13 regions of high velocity gas, which we interpret as candidate outflow lobes. Using the HCO{sup +} data, we also identified six clumps and estimated their physical parameters. On the basis of the ASTE data and near-infrared images from 2MASS, we present an updated three-dimensional model of this region. In order to investigate molecular outflows in W40, the SiO (J = 1−0, v = 0) emission line and some other emission lines at 40 GHz were also observed with the 45 m telescope at the Nobeyama Radio Observatory, but they were not detected at the present sensitivity.

Dense image correspondences for computer vision

CERN Document Server

Liu, Ce

2016-01-01

This book describes the fundamental building-block of many new computer vision systems: dense and robust correspondence estimation. Dense correspondence estimation techniques are now successfully being used to solve a wide range of computer vision problems, very different from the traditional applications such techniques were originally developed to solve. This book introduces the techniques used for establishing correspondences between challenging image pairs, the novel features used to make these techniques robust, and the many problems dense correspondences are now being used to solve. The book provides information to anyone attempting to utilize dense correspondences in order to solve new or existing computer vision problems. The editors describe how to solve many computer vision problems by using dense correspondence estimation. Finally, it surveys resources, code, and data necessary for expediting the development of effective correspondence-based computer vision systems.   ·         Provides i...

Dense module enumeration in biological networks

Science.gov (United States)

Tsuda, Koji; Georgii, Elisabeth

2009-12-01

Analysis of large networks is a central topic in various research fields including biology, sociology, and web mining. Detection of dense modules (a.k.a. clusters) is an important step to analyze the networks. Though numerous methods have been proposed to this aim, they often lack mathematical rigorousness. Namely, there is no guarantee that all dense modules are detected. Here, we present a novel reverse-search-based method for enumerating all dense modules. Furthermore, constraints from additional data sources such as gene expression profiles or customer profiles can be integrated, so that we can systematically detect dense modules with interesting profiles. We report successful applications in human protein interaction network analyses.

Dense module enumeration in biological networks

International Nuclear Information System (INIS)

Tsuda, Koji; Georgii, Elisabeth

2009-01-01

Analysis of large networks is a central topic in various research fields including biology, sociology, and web mining. Detection of dense modules (a.k.a. clusters) is an important step to analyze the networks. Though numerous methods have been proposed to this aim, they often lack mathematical rigorousness. Namely, there is no guarantee that all dense modules are detected. Here, we present a novel reverse-search-based method for enumerating all dense modules. Furthermore, constraints from additional data sources such as gene expression profiles or customer profiles can be integrated, so that we can systematically detect dense modules with interesting profiles. We report successful applications in human protein interaction network analyses.

Hierarchical macroscopic fibrillar adhesives: in situ study of buckling and adhesion mechanisms on wavy substrates.

Science.gov (United States)

Bauer, Christina T; Kroner, Elmar; Fleck, Norman A; Arzt, Eduard

2015-10-23

Nature uses hierarchical fibrillar structures to mediate temporary adhesion to arbitrary substrates. Such structures provide high compliance such that the flat fibril tips can be better positioned with respect to asperities of a wavy rough substrate. We investigated the buckling and adhesion of hierarchically structured adhesives in contact with flat smooth, flat rough and wavy rough substrates. A macroscopic model for the structural adhesive was fabricated by molding polydimethylsiloxane into pillars of diameter in the range of 0.3-4.8 mm, with up to three different hierarchy levels. Both flat-ended and mushroom-shaped hierarchical samples buckled at preloads one quarter that of the single level structures. We explain this behavior by a change in the buckling mode; buckling leads to a loss of contact and diminishes adhesion. Our results indicate that hierarchical structures can have a strong influence on the degree of adhesion on both flat and wavy substrates. Strategies are discussed that achieve highly compliant substrates which adhere to rough substrates.

Reconstruction of in-plane strain maps using hybrid dense sensor network composed of sensing skin

International Nuclear Information System (INIS)

Downey, Austin; Laflamme, Simon; Ubertini, Filippo

2016-01-01

The authors have recently developed a soft-elastomeric capacitive (SEC)-based thin film sensor for monitoring strain on mesosurfaces. Arranged in a network configuration, the sensing system is analogous to a biological skin, where local strain can be monitored over a global area. Under plane stress conditions, the sensor output contains the additive measurement of the two principal strain components over the monitored surface. In applications where the evaluation of strain maps is useful, in structural health monitoring for instance, such signal must be decomposed into linear strain components along orthogonal directions. Previous work has led to an algorithm that enabled such decomposition by leveraging a dense sensor network configuration with the addition of assumed boundary conditions. Here, we significantly improve the algorithm’s accuracy by leveraging mature off-the-shelf solutions to create a hybrid dense sensor network (HDSN) to improve on the boundary condition assumptions. The system’s boundary conditions are enforced using unidirectional RSGs and assumed virtual sensors. Results from an extensive experimental investigation demonstrate the good performance of the proposed algorithm and its robustness with respect to sensors’ layout. Overall, the proposed algorithm is seen to effectively leverage the advantages of a hybrid dense network for application of the thin film sensor to reconstruct surface strain fields over large surfaces. (paper)

Unified approach to dense matter

International Nuclear Information System (INIS)

Park, Byung-Yoon; Lee, Hee-Jung; Vento, Vicente; Kim, Joon-Il; Min, Dong-Pil; Rho, Mannque

2005-01-01

We apply the Skyrme model to dense hadronic matter, which provides a unified approach to high density, valid in the large N c limit. In our picture, dense hadronic matter is described by the classical soliton configuration with minimum energy for the given baryon number density. By incorporating the meson fluctuations on such ground state we obtain an effective Lagrangian for meson dynamics in a dense medium. Our starting point has been the Skyrme model defined in terms of pions, thereafter we have extended and improved the model by incorporating other degrees of freedom such as dilaton, kaons and vector mesons

INTERACTIONS BETWEEN FORMING STARS AND DENSE GAS IN THE SMALL LOW-MASS CLUSTER CEDERBLAD 110

Energy Technology Data Exchange (ETDEWEB)

Ladd, E. F. [Department of Physics and Astronomy, Bucknell University, Lewisburg, PA 17837 (United States); Wong, T. [Department of Astronomy, University of Illinois, Urbana, IL 61801 (United States); Bourke, T. L. [Harvard-Smithsonian Center for Astrophysics, 60 Garden Street, Cambridge, MA 02138 (United States); Thompson, K. L., E-mail: ladd@bucknell.edu [Department of Physics and Astronomy, University of Kentucky, Lexington, KY 40506 (United States)

2011-12-20

We present observations of dense gas and outflow activity in the Cederblad 110 region of the Chamaeleon I dark cloud complex. The region contains nine forming low-mass stars in evolutionary stages ranging from Class 0 to Class II/III crowded into a 0.2 pc region with high surface density ({Sigma}{sub YSO} {approx} 150 pc{sup -2}). The analysis of our N{sub 2}H{sup +} (J = 1{yields}0) maps indicates the presence of 13 {+-} 3 solar masses of dense (n {approx} 10{sup 5} cm{sup -3}) gas in this region, much of which is unstable against gravitational collapse. The most unstable material is located near the Class 0 source MMS-1, which is almost certainly actively accreting material from its dense core. Smaller column densities of more stable dense gas are found toward the region's Class I sources, IRS 4, 11, and 6. Little or no dense gas is colocated with the Class II and III sources in the region. The outflow from IRS 4 is interacting with the dense core associated with MMS-1. The molecular component of the outflow, measured in the (J = 1{yields}0) line of {sup 12}CO, appears to be deflected by the densest part of the core, after which it appears to plow through some of the lower column density portions of the core. The working surface between the head of the outflow lobe and the dense core material can be seen in the enhanced velocity dispersion of the dense gas. IRS 2, the Class III source that produces the optical reflection nebula that gives the Cederblad 110 region its name, may also be influencing the dense gas in the region. A dust temperature gradient across the MMS-1 dense core is consistent with warming from IRS 2, and a sharp gradient in dense gas column density may be caused by winds from this source. Taken together, our data indicate that this region has been producing several young stars in the recent past, and that sources which began forming first are interacting with the remaining dense gas in the region, thereby influencing current and future star

Nucleolar structure and synthetic activity during meiotic prophase and spermiogenesis in the rat

International Nuclear Information System (INIS)

Schultz, M.C.; Leblond, C.P.

1990-01-01

The ultrastructure of nucleoli was examined in developing rat spermatocytes and spermatids, with the help of serial sections. In addition, the radioautographic reaction of nucleoli as examined in rats sacrificed 1 hr after intratesticular injection of 3H(5')-uridine and taken as an index of the rate of synthesis of ribosomal RNA (rRNA). Primary spermatocytes from preleptotene to zygotene have small nucleoli typically composed of fibrillar centers, a fibrillar component, and a granular component, within which are narrow interstitial spaces. During early and mid-pachytene, nucleoli enlarge to about nine times their initial size, with the fibrillar and granular components forming an extensive network of cords--a nucleolonema--within which are wide interstitial spaces. Meanwhile, there appear structures identical to the granular component but distinct from nucleoli; they are referred to as extranucleolar granular elements. Finally, from late pachytene to the first maturation division, nucleoli undergo condensation, as shown by contraction of fibrillar centers into small clumps, while fibrillar and granular components condense and segregate from each other, with a gradual decrease in interstitial spaces. In secondary spermatocytes, nucleoli are compact and rather small, while in young spermatids they are also compact and even smaller. Nucleoli disappear in elongating spermatids. In 3H-uridine radioautographs, nucleolar label is weak in young primary spermatocytes, increases progressively during early pachytene, is strong by the end of mid pachytene, but gradually decreases during late pachytene up to the first maturation division. In secondary spermatocytes and spermatids, there is no significant nucleolar label. In conclusion, rRNA synthesis by nucleoli is low in young spermatocytes

Propagation of an attosecond pulse in a dense two-level medium

International Nuclear Information System (INIS)

Song Xiaohong; Gong Shangqing; Yang Weifeng; Xu Zhizhan

2004-01-01

We investigate the propagation of attosecond pulse in a dense two-level medium by using an iterative predictor-corrector finite-difference time-domain method. We find when attosecond pulse is considered, that the standard area theorem will break down even for small area pulses: ideal self-induced transparency cannot occur even for a 2π pulse, while the pulses whose areas are not integer multiples of 2π, such as 1.8π and 2.2π pulses, cannot evolve to 2π pulses as predicted by the standard area theorem. Significantly higher spectra components can occur on all these small area propagating pulses due to strong carrier reshaping. Furthermore, these higher spectral components dependent sensitively on the pulse area: the larger the pulse area is, the more evident are these higher spectral components

Constructing Dense Graphs with Unique Hamiltonian Cycles

Science.gov (United States)

Lynch, Mark A. M.

2012-01-01

It is not difficult to construct dense graphs containing Hamiltonian cycles, but it is difficult to generate dense graphs that are guaranteed to contain a unique Hamiltonian cycle. This article presents an algorithm for generating arbitrarily large simple graphs containing "unique" Hamiltonian cycles. These graphs can be turned into dense graphs…

Hadrons in dense matter. Proceedings

International Nuclear Information System (INIS)

Buballa, M.; Noerenberg, W.; Schaefer, B.J.; Wambach, J.

2000-03-01

The following topics were dealt with: Elementary hadronic reactions, Delta dynamics in nuclei, in-medium s-wave ππ-correlations, strangeness in hot and dense matter, medium modifications of vector mesons and dilepton production, medium modifications of charmonium, thermal properties of hot and dense hadronic matter, nuclear matter, spectral functions and QCD sum rules

Embedded 100 Gbps Photonic Components:

Energy Technology Data Exchange (ETDEWEB)

Kuznia, Charlie

2018-04-26

This innovation to fiber optic component technology increases the performance, reduces the size and reduces the power consumption of optical communications within dense network systems, such as advanced distributed computing systems and data centers. VCSEL technology is enabling short-reach (< 100 m) and >100 Gbps optical interconnections over multi-mode fiber in commercial applications.

SD-SEM: sparse-dense correspondence for 3D reconstruction of microscopic samples.

Science.gov (United States)

Baghaie, Ahmadreza; Tafti, Ahmad P; Owen, Heather A; D'Souza, Roshan M; Yu, Zeyun

2017-06-01

Scanning electron microscopy (SEM) imaging has been a principal component of many studies in biomedical, mechanical, and materials sciences since its emergence. Despite the high resolution of captured images, they remain two-dimensional (2D). In this work, a novel framework using sparse-dense correspondence is introduced and investigated for 3D reconstruction of stereo SEM images. SEM micrographs from microscopic samples are captured by tilting the specimen stage by a known angle. The pair of SEM micrographs is then rectified using sparse scale invariant feature transform (SIFT) features/descriptors and a contrario RANSAC for matching outlier removal to ensure a gross horizontal displacement between corresponding points. This is followed by dense correspondence estimation using dense SIFT descriptors and employing a factor graph representation of the energy minimization functional and loopy belief propagation (LBP) as means of optimization. Given the pixel-by-pixel correspondence and the tilt angle of the specimen stage during the acquisition of micrographs, depth can be recovered. Extensive tests reveal the strength of the proposed method for high-quality reconstruction of microscopic samples. Copyright © 2017 Elsevier Ltd. All rights reserved.

Interference Coordination for Dense Wireless Networks

DEFF Research Database (Denmark)

Soret, Beatriz; Pedersen, Klaus I.; Jørgensen, Niels T.K.

2015-01-01

and dense deployment in Tokyo are compared. Evolution to DenseNets offers new opportunities for further development of downlink interference cooperation techniques. Various mechanisms in LTE and LTE-Advanced are revisited. Some techniques try to anticipate the future in a proactive way, whereas others......The promise of ubiquitous and super-fast connectivity for the upcoming years will be in large part fulfilled by the addition of base stations and spectral aggregation. The resulting very dense networks (DenseNets) will face a number of technical challenges. Among others, the interference emerges...... as an old acquaintance with new significance. As a matter of fact, the interference conditions and the role of aggressor and victim depend to a large extent on the density and the scenario. To illustrate this, downlink interference statistics for different 3GPP simulation scenarios and a more irregular...

Some Structural Observations of Self-Assembling, Fibrillar Gels Composed of Two-Directional Bolaform Arborols

Energy Technology Data Exchange (ETDEWEB)

Sun, J.

2005-01-12

Arborols are dumbbell shaped molecules (bolaform amphiphiles) in which a hydrophobic spacer separates two hydrophilic end groups. They are a valuable model for naturally occurring fibers, such as actin or amyloid. Applications to materials science can be envisioned. On cooling from warm aqueous or methanolic solutions, arborols spontaneously assemble into long fibers. When the solutions are above a certain concentration that depends on the hydrophilic/hydrophobic balance, this leads to thermally reversible gels stabilized by a mechanism that is poorly understood. With the help of wide angle X-ray scattering, details of the arborol fiber and gel structure were obtained on wet gels. The characteristic dimensions of the fibers vary in a sensible fashion with the molecular specifics. Solvent character appears to affect the average domain length of arborols stacked into fibers. Fluorescently labeled arborols were prepared. The label does not prevent incorporation into the fibrillar structure, rendering fibril bundles visible in wet gels. Bundles are visible in concentrated gels, but not in less concentrated sols. These results are consistent with observations of dried arborols using atomic force microscopy and with previously published freeze-fracture electron microscopy and small angle X-ray scattering experiments on dried gels.

Dynamical theory of dense groups of galaxies

Science.gov (United States)

Mamon, Gary A.

1990-01-01

It is well known that galaxies associate in groups and clusters. Perhaps 40% of all galaxies are found in groups of 4 to 20 galaxies (e.g., Tully 1987). Although most groups appear to be so loose that the galaxy interactions within them ought to be insignificant, the apparently densest groups, known as compact groups appear so dense when seen in projection onto the plane of the sky that their members often overlap. These groups thus appear as dense as the cores of rich clusters. The most popular catalog of compact groups, compiled by Hickson (1982), includes isolation among its selection critera. Therefore, in comparison with the cores of rich clusters, Hickson's compact groups (HCGs) appear to be the densest isolated regions in the Universe (in galaxies per unit volume), and thus provide in principle a clean laboratory for studying the competition of very strong gravitational interactions. The $64,000 question here is then: Are compact groups really bound systems as dense as they appear? If dense groups indeed exist, then one expects that each of the dynamical processes leading to the interaction of their member galaxies should be greatly enhanced. This leads us to the questions: How stable are dense groups? How do they form? And the related question, fascinating to any theorist: What dynamical processes predominate in dense groups of galaxies? If HCGs are not bound dense systems, but instead 1D change alignments (Mamon 1986, 1987; Walke & Mamon 1989) or 3D transient cores (Rose 1979) within larger looser systems of galaxies, then the relevant question is: How frequent are chance configurations within loose groups? Here, the author answers these last four questions after comparing in some detail the methods used and the results obtained in the different studies of dense groups.

Packing frustration in dense confined fluids.

Science.gov (United States)

Nygård, Kim; Sarman, Sten; Kjellander, Roland

2014-09-07

Packing frustration for confined fluids, i.e., the incompatibility between the preferred packing of the fluid particles and the packing constraints imposed by the confining surfaces, is studied for a dense hard-sphere fluid confined between planar hard surfaces at short separations. The detailed mechanism for the frustration is investigated via an analysis of the anisotropic pair distributions of the confined fluid, as obtained from integral equation theory for inhomogeneous fluids at pair correlation level within the anisotropic Percus-Yevick approximation. By examining the mean forces that arise from interparticle collisions around the periphery of each particle in the slit, we calculate the principal components of the mean force for the density profile--each component being the sum of collisional forces on a particle's hemisphere facing either surface. The variations of these components with the slit width give rise to rather intricate changes in the layer structure between the surfaces, but, as shown in this paper, the basis of these variations can be easily understood qualitatively and often also semi-quantitatively. It is found that the ordering of the fluid is in essence governed locally by the packing constraints at each single solid-fluid interface. A simple superposition of forces due to the presence of each surface gives surprisingly good estimates of the density profiles, but there remain nontrivial confinement effects that cannot be explained by superposition, most notably the magnitude of the excess adsorption of particles in the slit relative to bulk.

Dense Output for Strong Stability Preserving Runge–Kutta Methods

KAUST Repository

Ketcheson, David I.

2016-12-10

We investigate dense output formulae (also known as continuous extensions) for strong stability preserving (SSP) Runge–Kutta methods. We require that the dense output formula also possess the SSP property, ideally under the same step-size restriction as the method itself. A general recipe for first-order SSP dense output formulae for SSP methods is given, and second-order dense output formulae for several optimal SSP methods are developed. It is shown that SSP dense output formulae of order three and higher do not exist, and that in any method possessing a second-order SSP dense output, the coefficient matrix A has a zero row.

Orbital free molecular dynamics; Approche sans orbitale des plasmas denses

Energy Technology Data Exchange (ETDEWEB)

Lambert, F

2007-08-15

The microscopic properties of hot and dense plasmas stay a field essentially studied thanks to classical theories like the One Component Plasma, models which rely on free parameters, particularly ionization. In order to investigate these systems, we have used, in this PhD work, a semi-classical model, without free parameters, that is based on coupling consistently classical molecular dynamics for the nuclei and orbital free density functional theory for the electrons. The electronic fluid is represented by a free energy entirely determined by the local density. This approximation was validated by a comparison with an ab initio technique, quantum molecular dynamics. This one is identical to the previous except for the description of the free energy that depends on a quantum-independent-particle model. Orbital free molecular dynamics was then used to compute equation of state of boron and iron plasmas in the hot and dense regime. Furthermore, comparisons with classical theories were performed on structural and dynamical properties. Finally, equation of state and transport coefficients mixing laws were studied by direct simulation of a plasma composed of deuterium and copper. (author)

Optimal super dense coding over memory channels

OpenAIRE

Shadman, Zahra; Kampermann, Hermann; Macchiavello, Chiara; Bruß, Dagmar

2011-01-01

We study the super dense coding capacity in the presence of quantum channels with correlated noise. We investigate both the cases of unitary and non-unitary encoding. Pauli channels for arbitrary dimensions are treated explicitly. The super dense coding capacity for some special channels and resource states is derived for unitary encoding. We also provide an example of a memory channel where non-unitary encoding leads to an improvement in the super dense coding capacity.

Mining connected global and local dense subgraphs for bigdata

Science.gov (United States)

Wu, Bo; Shen, Haiying

2016-01-01

The problem of discovering connected dense subgraphs of natural graphs is important in data analysis. Discovering dense subgraphs that do not contain denser subgraphs or are not contained in denser subgraphs (called significant dense subgraphs) is also critical for wide-ranging applications. In spite of many works on discovering dense subgraphs, there are no algorithms that can guarantee the connectivity of the returned subgraphs or discover significant dense subgraphs. Hence, in this paper, we define two subgraph discovery problems to discover connected and significant dense subgraphs, propose polynomial-time algorithms and theoretically prove their validity. We also propose an algorithm to further improve the time and space efficiency of our basic algorithm for discovering significant dense subgraphs in big data by taking advantage of the unique features of large natural graphs. In the experiments, we use massive natural graphs to evaluate our algorithms in comparison with previous algorithms. The experimental results show the effectiveness of our algorithms for the two problems and their efficiency. This work is also the first that reveals the physical significance of significant dense subgraphs in natural graphs from different domains.

Transport properties of dense matter

International Nuclear Information System (INIS)

Itoh, Naoki; Mitake, Shinichi; Iyetomi, Hiroshi; Ichimaru, Setsuo

1983-01-01

Transport coefficients, electrical and thermal conductivities in particular, are essential physical quantities for the theories of stellar structure. Since the discoveries of pulsars and X-ray stars, an accurate evaluation of the transport coefficients in the dense matter has become indispensable to the quantitative understanding of the observed neutron stars. The authors present improved calculations of the electrical and thermal conductivities of the dense matter in the liquid metal phase, appropriate to white dwarfs and neutron stars. (Auth.)

Finding dense locations in indoor tracking data

DEFF Research Database (Denmark)

Ahmed, Tanvir; Pedersen, Torben Bach; Lu, Hua

2014-01-01

for semi-constrained indoor movement, and then uses this to map raw tracking records into mapping records representing object entry and exit times in particular locations. Then, an efficient indexing structure, the Dense Location Time Index (DLT-Index) is proposed for indexing the time intervals...... of the mapping table, along with associated construction, query processing, and pruning techniques. The DLT-Index supports very efficient aggregate point queries, interval queries, and dense location queries. A comprehensive experimental study with real data shows that the proposed techniques can efficiently......Finding the dense locations in large indoor spaces is very useful for getting overloaded locations, security, crowd management, indoor navigation, and guidance. Indoor tracking data can be very large and are not readily available for finding dense locations. This paper presents a graph-based model...

Extra-fibrillar matrix mechanics of annulus fibrosus in tension and compression.

Science.gov (United States)

Cortes, Daniel H; Elliott, Dawn M

2012-07-01

The annulus fibrosus (AF) of the disk is a highly nonlinear and anisotropic material that undergoes a complex combination of loads in multiple orientations. The tensile mechanical behavior of AF in the lamellar plane is dominated by collagen fibers and has been accurately modeled using exponential functions. On the other hand, AF mechanics perpendicular to the lamella, in the radial direction, depend on the properties of the ground matrix with little to no fiber contribution. The ground matrix is mainly composed of proteoglycans (PG), which are negatively charged macromolecules that maintain the tissue hydration via osmotic pressure. The mechanical response of the ground matrix can be divided in the contribution of osmotic pressure and an elastic solid part known as extra-fibrillar matrix (EFM). Mechanical properties of the ground matrix have been measured using tensile and confined compression tests. However, EFM mechanics have not been measured directly. The objective of this study was to measure AF nonlinear mechanics of the EFM in tension and compression. To accomplish this, a combination of osmotic swelling and confined compression in disk radial direction, perpendicular to the lamella, was used. For this type of analysis, it was necessary to define a stress-free reference configuration. Thus, a brief analysis on residual stress in the disk and a procedure to estimate the reference configuration are presented. The proposed method was able to predict similar swelling deformations when using different loading protocols and models for the EFM, demonstrating its robustness. The stress-stretch curve of the EFM was linear in the range 0.9 disk and can be applied to differentiate between functional degeneration effects such as PG loss and stiffening due to cross-linking.

Dense Breasts: Answers to Commonly Asked Questions

Science.gov (United States)

... Cancer Prevention Genetics of Breast & Gynecologic Cancers Breast Cancer Screening Research Dense Breasts: Answers to Commonly Asked Questions What are dense breasts? Breasts contain glandular, connective, and fat tissue. Breast density is a term that describes the ...

Imaging Cytoskeleton Components by Electron Microscopy.

Science.gov (United States)

Svitkina, Tatyana

2016-01-01

The cytoskeleton is a complex of detergent-insoluble components of the cytoplasm playing critical roles in cell motility, shape generation, and mechanical properties of a cell. Fibrillar polymers-actin filaments, microtubules, and intermediate filaments-are major constituents of the cytoskeleton, which constantly change their organization during cellular activities. The actin cytoskeleton is especially polymorphic, as actin filaments can form multiple higher order assemblies performing different functions. Structural information about cytoskeleton organization is critical for understanding its functions and mechanisms underlying various forms of cellular activity. Because of the nanometer-scale thickness of cytoskeletal fibers, electron microscopy (EM) is a key tool to determine the structure of the cytoskeleton. This article describes application of rotary shadowing (or metal replica) EM for visualization of the cytoskeleton. The procedure is applicable to thin cultured cells growing on glass coverslips and consists of detergent extraction of cells to expose their cytoskeleton, chemical fixation to provide stability, ethanol dehydration and critical point drying to preserve three-dimensionality, rotary shadowing with platinum to create contrast, and carbon coating to stabilize replicas. This technique provides easily interpretable three-dimensional images, in which individual cytoskeletal fibers are clearly resolved, and individual proteins can be identified by immunogold labeling. More importantly, replica EM is easily compatible with live cell imaging, so that one can correlate the dynamics of a cell or its components, e.g., expressed fluorescent proteins, with high resolution structural organization of the cytoskeleton in the same cell.

Development of the policy indicator checklist: a tool to identify and measure policies for calorie-dense foods and sugar-sweetened beverages across multiple settings.

Science.gov (United States)

Lee, Rebecca E; Hallett, Allen M; Parker, Nathan; Kudia, Ousswa; Kao, Dennis; Modelska, Maria; Rifai, Hanadi; O'Connor, Daniel P

2015-05-01

We developed the policy indicator checklist (PIC) to identify and measure policies for calorie-dense foods and sugar-sweetened beverages to determine how policies are clustered across multiple settings. In 2012 and 2013 we used existing literature, policy documents, government recommendations, and instruments to identify key policies. We then developed the PIC to examine the policy environments across 3 settings (communities, schools, and early care and education centers) in 8 communities participating in the Childhood Obesity Research Demonstration Project. Principal components analysis revealed 5 components related to calorie-dense food policies and 4 components related to sugar-sweetened beverage policies. Communities with higher youth and racial/ethnic minority populations tended to have fewer and weaker policy environments concerning calorie-dense foods and healthy foods and beverages. The PIC was a helpful tool to identify policies that promote healthy food environments across multiple settings and to measure and compare the overall policy environments across communities. There is need for improved coordination across settings, particularly in areas with greater concentration of youths and racial/ethnic minority populations. Policies to support healthy eating are not equally distributed across communities, and disparities continue to exist in nutrition policies.

Warm Dense Matter: An Overview

International Nuclear Information System (INIS)

Kalantar, D H; Lee, R W; Molitoris, J D

2004-01-01

This document provides a summary of the ''LLNL Workshop on Extreme States of Materials: Warm Dense Matter to NIF'' which was held on 20, 21, and 22 February 2002 at the Wente Conference Center in Livermore, CA. The warm dense matter regime, the transitional phase space region between cold material and hot plasma, is presently poorly understood. The drive to understand the nature of matter in this regime is sparking scientific activity worldwide. In addition to pure scientific interest, finite temperature dense matter occurs in the regimes of interest to the SSMP (Stockpile Stewardship Materials Program). So that obtaining a better understanding of WDM is important to performing effective experiments at, e.g., NIF, a primary mission of LLNL. At this workshop we examined current experimental and theoretical work performed at, and in conjunction with, LLNL to focus future activities and define our role in this rapidly emerging research area. On the experimental front LLNL plays a leading role in three of the five relevant areas and has the opportunity to become a major player in the other two. Discussion at the workshop indicated that the path forward for the experimental efforts at LLNL were two fold: First, we are doing reasonable baseline work at SPLs, HE, and High Energy Lasers with more effort encouraged. Second, we need to plan effectively for the next evolution in large scale facilities, both laser (NIF) and Light/Beam sources (LCLS/TESLA and GSI) Theoretically, LLNL has major research advantages in areas as diverse as the thermochemical approach to warm dense matter equations of state to first principles molecular dynamics simulations. However, it was clear that there is much work to be done theoretically to understand warm dense matter. Further, there is a need for a close collaboration between the generation of verifiable experimental data that can provide benchmarks of both the experimental techniques and the theoretical capabilities. The conclusion of this

Survival of density subpopulations of rabbit platelets: use of 51Cr-or 111In-labeled platelets to measure survival of least dense and most dense platelets concurrently

International Nuclear Information System (INIS)

Rand, M.L.; Packham, M.A.; Mustard, J.F.

1983-01-01

The origin of the density heterogeneity of platelets was studied by measuring the survival of density subpopulations of rabbit platelets separated by discontinuous Stractan density gradient centrifugation. When a total population of 51 Cr-labelled platelets was injected into recipient rabbits, the relative specific radioactivity of the most dense platelets decreased rapidly. In contrast, that of the least dense platelets had not changed 24 hr after injection, and then decreased slowly. To distinguish between the possibilities that most dense platelets are cleared from the circulation more quickly than least dense platelets or that platelets decrease in density as they age in the circulation, the concurrent survival of least dense and most dense platelets, labelled with either 51 Cr or 111 In-labelled total platelet populations, determined concurrently in the same rabbits, are identical, calculated from 1 hr values as 100%. However, the 1-hr recovery of 111 In-labelled platelets was slightly but significantly less than that of 51 Cr-labelled platelets. Therefore, researchers studied the survival of 51 Cr-labelled least dense and 111 In-labelled most dense platelets as well as that of 111 In-labelled least dense and 51 Cr-labelled most dense platelets. Mean 1-hr recovery of least dense platelets, labelled with either isotope (78% +/- 7%, SD) was similar to that of most dense platelets, labelled with either isotope (77% +/- 8%; SD). Mean survival of least dense platelets was 47.3 +/- 18.7 hr (SD), which was significantly less than that of most dense platelets (76.1 +/- 21.6 hr; SD) (p less than 0.0025). These results indicate that platelets decrease in buoyant density as they age in the circulation and that most dense platelets are enriched in young platelets, and least dense in old

Dense Deposit Disease Mimicking a Renal Small Vessel Vasculitis

Science.gov (United States)

Singh, Lavleen; Bhardwaj, Swati; Sinha, Aditi; Bagga, Arvind; Dinda, Amit

2016-01-01

Dense deposit disease is caused by fluid-phase dysregulation of the alternative complement pathway and frequently deviates from the classic membranoproliferative pattern of injury on light microscopy. Other patterns of injury described for dense deposit disease include mesangioproliferative, acute proliferative/exudative, and crescentic GN. Regardless of the histologic pattern, C3 glomerulopathy, which includes dense deposit disease and C3 GN, is defined by immunofluorescence intensity of C3c two or more orders of magnitude greater than any other immune reactant (on a 0–3 scale). Ultrastructural appearances distinguish dense deposit disease and C3 GN. Focal and segmental necrotizing glomerular lesions with crescents, mimicking a small vessel vasculitis such as ANCA-associated GN, are a very rare manifestation of dense deposit disease. We describe our experience with this unusual histologic presentation and distinct clinical course of dense deposit disease, discuss the pitfalls in diagnosis, examine differential diagnoses, and review the relevant literature. PMID:26361799

Stark broadening of isolated lines from high-Z emitters in dense plasmas

International Nuclear Information System (INIS)

Weisheit, J.C.; Pollock, E.L.

1980-09-01

The joint distribution of the electric microfield and its longitudinal derivative is required for the calculation of line profiles for the He-like ions in very dense plasmas. We used a molecular dynamics code to compute exact distributions in single- and multi-component plasmas, and then we investigated various analytical approximations to these results. We found that a simplified, two-nearest-neighbor scheme leads to surprisingly accurate distribution functions. Our results are illustrated by sample profiles for Ne +8 and Ar +16 resonance lines

Composite systems of dilute and dense couplings

International Nuclear Information System (INIS)

Raymond, J R; Saad, D

2008-01-01

Composite systems, where couplings are of two types, a combination of strong dilute and weak dense couplings of Ising spins, are examined through the replica method. The dilute and dense parts are considered to have independent canonical disordered or uniform bond distributions; mixing the models by variation of a parameter γ alongside inverse temperature β we analyse the respective thermodynamic solutions. We describe the variation in high temperature transitions as mixing occurs; in the vicinity of these transitions we exactly analyse the competing effects of the dense and sparse models. By using the replica symmetric ansatz and population dynamics we described the low temperature behaviour of mixed systems

Constitutive law of dense granular matter

International Nuclear Information System (INIS)

Hatano, Takahiro

2010-01-01

The frictional properties of dense granular matter under steady shear flow are investigated using numerical simulation. Shear flow tends to localize near the driving boundary unless the coefficient of restitution is close to zero and the driving velocity is small. The bulk friction coefficient is independent of shear rate in dense and slow flow, whereas it is an increasing function of shear rate in rapid flow. The coefficient of restitution affects the friction coefficient only in such rapid flow. Contrastingly, in dense and slow regime, the friction coefficient is independent of the coefficient of restitution and mainly determined by the elementary friction coefficient and the rotation of grains. It is found that the mismatch between the vorticity of flow and the angular frequency of grains plays a key role to the frictional properties of sheared granular matter.

Dynamics of dense particle disks

International Nuclear Information System (INIS)

Araki, S.; Tremaine, S.; Toronto Univ., Canada)

1986-01-01

The present investigation of mechanical equilibrium and collisional transport processes in dense, differentially rotating particle disks is based on the Enskog (1922) theory of dense, hard sphere gases, with the single exception that the spheres are inelastic. The viscous instability suggested as a source of Saturn B ring structure does not arise in the models presented, although the ring may be subject to a phase transition analogous to the liquid-solid transition observed in molecular dynamics simulations of elastic hard spheres. In such a case, the ring would alternately exhibit zero-shear, or solid, and high shear, or liquid, zones. 29 references

The role of working memory sub-components in food choice and dieting success.

Science.gov (United States)

Whitelock, Victoria; Nouwen, Arie; van den Akker, Olga; Higgs, Suzanne

2018-05-01

Evidence suggests a role for self-reported working memory (WM) in self-reported food intake, but it is not known which WM sub-components are involved. It is also important to consider how individual differences in dietary restraint and disinhibition influence WM and the impact of this on food choice. The current study assessed the relationship between WM sub-components and food choice, using computerised measures of WM sub-components and a direct assessment of food intake. The role of dieting success (measured by restraint and disinhibition) as a distal predictor of food choice that influences food choices via WM, and the role of WM more generally in dieting success were investigated. Female undergraduate students (N = 117, mean age: 18.9 years, mean BMI: 21.6 kg/m 2 ) completed computer tasks assessing three components of WM (updating, phonological loop and visuospatial sketchpad) and a snack food taste-test. Greater visuospatial WM span was associated with a higher (lower) percentage of food intake that was low (high) energy dense. It was also found that unsuccessful dieters (high restraint, high disinhibition) had poorer visuospatial WM span and consumed a lower (higher) percentage of low (high) energy dense food. Visuospatial WM span significantly mediated the relationship between dieting success and percentage of low energy dense food intake. Further, dietary restraint was associated with poorer updating ability, irrespective of disinhibition. These findings suggest that better visuospatial WM is associated with a greater (reduced) preference for low (high) energy dense foods, and that deficits in visuospatial WM may undermine dieting attempts. Future work should assess whether the ability to deal with food cravings mediates the relationship between visuospatial WM and dieting success and investigate how WM may influence the mechanisms underlying behavioural control. Copyright © 2017 Elsevier Ltd. All rights reserved.

Quantum statistical mechanics of dense partially ionized hydrogen.

Science.gov (United States)

Dewitt, H. E.; Rogers, F. J.

1972-01-01

The theory of dense hydrogenic plasmas beginning with the two component quantum grand partition function is reviewed. It is shown that ionization equilibrium and molecular dissociation equilibrium can be treated in the same manner with proper consideration of all two-body states. A quantum perturbation expansion is used to give an accurate calculation of the equation of state of the gas for any degree of dissociation and ionization. In this theory, the effective interaction between any two charges is the dynamic screened potential obtained from the plasma dielectric function. We make the static approximation; and we carry out detailed numerical calculations with the bound and scattering states of the Debye potential, using the Beth-Uhlenbeck form of the quantum second virial coefficient. We compare our results with calculations from the Saha equation.

Equation of state and transport properties of warm dense helium via quantum molecular dynamics simulations

Energy Technology Data Exchange (ETDEWEB)

Li, Zhi-Guo [College of Physical Science and Technology, Sichuan University, Chengdu 610064 (China); National Key Laboratory for Shock Wave and Detonation Physics Research, Institute of Fluid Physics, Chinese Academy of Engineering Physics, Mianyang 621900 (China); Key Laboratory of High Energy Density Physics and Technology of Ministry of Education, Sichuan University, Chengdu 610064 (China); Cheng, Yan [College of Physical Science and Technology, Sichuan University, Chengdu 610064 (China); Key Laboratory of High Energy Density Physics and Technology of Ministry of Education, Sichuan University, Chengdu 610064 (China); Chen, Qi-Feng, E-mail: chenqf01@gmail.com, E-mail: xrchen@scu.edu.cn [National Key Laboratory for Shock Wave and Detonation Physics Research, Institute of Fluid Physics, Chinese Academy of Engineering Physics, Mianyang 621900 (China); Chen, Xiang-Rong, E-mail: chenqf01@gmail.com, E-mail: xrchen@scu.edu.cn [College of Physical Science and Technology, Sichuan University, Chengdu 610064 (China)

2016-05-15

The equation of state, self-diffusion, and viscosity coefficients of helium have been investigated by quantum molecular dynamics (QMD) simulations in the warm dense matter regime. Our simulations are validated through the comparison with the reliable experimental data. The calculated principal and reshock Hugoniots of liquid helium are in good agreement with the gas-gun data. On this basis, we revisit the issue for helium, i.e., the possibility of the instabilities predicted by chemical models at around 2000 GPa and 10 g/cm{sup 3} along the pressure isotherms of 6309, 15 849, and 31 623 K. Our calculations show no indications of instability in this pressure-temperature region, which reconfirm the predictions of previous QMD simulations. The self-diffusion and viscosity coefficients of warm dense helium have been systematically investigated by the QMD simulations. We carefully test the finite-size effects and convergences of statistics, and obtain numerically converged self-diffusion and viscosity coefficients by using the Kubo-Green formulas. The present results have been used to evaluate the existing one component plasma models. Finally, the validation of the Stokes-Einstein relationship for helium in the warm dense regime is discussed.

Finding dense locations in symbolic indoor tracking data

DEFF Research Database (Denmark)

Ahmed, Tanvir; Pedersen, Torben Bach; Lu, Hua

2017-01-01

presents two graph-based models for constrained and semi-constrained indoor movement, respectively, and then uses the models to map raw tracking records into mapping records that represent object entry and exit times in particular locations. Subsequently, an efficient indexing structure called Hierarchical...... Dense Location Time Index (HDLT-Index) is proposed for indexing the time intervals of the mapping table, along with index construction, query processing, and pruning techniques. The HDLT-Index supports very efficient aggregate point, interval, and duration queries as well as dense location queries......Finding the dense locations in large indoor spaces is very useful for many applications such as overloaded area detection, security control, crowd management, indoor navigation, and so on. Indoor tracking data can be enormous and are not immediately ready for finding dense locations. This paper...

Quercetin protects human brain microvascular endothelial cells from fibrillar β-amyloid1–40-induced toxicity

Directory of Open Access Journals (Sweden)

Yongjie Li

2015-01-01

Full Text Available Amyloid beta-peptides (Aβ are known to undergo active transport across the blood-brain barrier, and cerebral amyloid angiopathy has been shown to be a prominent feature in the majority of Alzheimer׳s disease. Quercetin is a natural flavonoid molecule and has been demonstrated to have potent neuroprotective effects, but its protective effect on endothelial cells under Aβ-damaged condition is unclear. In the present study, the protective effects of quercetin on brain microvascular endothelial cells injured by fibrillar Aβ1–40 (fAβ1–40 were observed. The results show that fAβ1–40-induced cytotoxicity in human brain microvascular endothelial cells (hBMECs can be relieved by quercetin treatment. Quercetin increases cell viability, reduces the release of lactate dehydrogenase, and relieves nuclear condensation. Quercetin also alleviates intracellular reactive oxygen species generation and increases superoxide dismutase activity. Moreover, it strengthens the barrier integrity through the preservation of the transendothelial electrical resistance value, the relief of aggravated permeability, and the increase of characteristic enzyme levels after being exposed to fAβ1–40. In conclusion, quercetin protects hBMECs from fAβ1–40-induced toxicity.

An immunofluorescence assay for extracellular matrix components highlights the role of epithelial cells in producing a stable, fibrillar extracellular matrix

Directory of Open Access Journals (Sweden)

Omar S. Qureshi

2017-10-01

Full Text Available Activated fibroblasts are considered major drivers of fibrotic disease progression through the production of excessive extracellular matrix (ECM in response to signals from damaged epithelial and inflammatory cells. Nevertheless, epithelial cells are capable of expressing components of the ECM, cross-linking enzymes that increase its stability and are sensitive to factors involved in the early stages of fibrosis. We therefore wanted to test the hypothesis that epithelial cells can deposit ECM in response to stimulation in a comparable manner to fibroblasts. We performed immunofluorescence analysis of components of stable, mature extracellular matrix produced by primary human renal proximal tubular epithelial cells and renal fibroblasts in response to cytokine stimulation. Whilst fibroblasts produced a higher basal level of extracellular matrix components, epithelial cells were able to deposit significant levels of fibronectin, collagen I, III and IV in response to cytokine stimulation. In response to hypoxia, epithelial cells showed an increase in collagen IV deposition but not in response to the acute stress stimuli aristolochic acid or hydrogen peroxide. When epithelial cells were in co-culture with fibroblasts we observed significant increases in the level of matrix deposition which could be reduced by transforming growth factor beta (TGF-β blockade. Our results highlight the role of epithelial cells acting as efficient producers of stable extracellular matrix which could contribute to renal tubule thickening in fibrosis.

Kinetic chemistry of dense interstellar clouds

International Nuclear Information System (INIS)

Graedel, T.E.; Langer, W.D.; Frerking, M.A.

1982-01-01

A detailed model of the time-dependent chemistry of dense interstellar clouds has been developed to study the dominant chemical processes in carbon and oxygen isotope fractionation, formation of nitrogen-containing molecules, evolution of product molecules as a function of cloud density and temperature, and other topics of interest. The full computation involves 328 individual reactions (expanded to 1067 to study carbon and oxygen isotope chemistry); photodegradation processes are unimportant in these dense clouds and are excluded

K-α X-ray Thomson Scattering From Dense Plasmas

International Nuclear Information System (INIS)

Kritcher, Andrea L.; Neumayer, Paul; Castor, John; Doeppner, Tilo; Landen, Otto L.; Ng, Andrew; Pollaine, Steve; Price, Dwight; Glenzer, Siegfried H.; Falcone, Roger W.; Ja Lee, Hae; Lee, Richard W.; Morse, Edward C.

2009-01-01

Spectrally resolved Thomson scattering using ultra-fast K-α x rays has measured the compression and heating of shocked compressed matter. The evolution and coalescence of two shock waves traveling through a solid density LiH target were characterized by the elastic scattering component. The density and temperature at shock coalescence, 2.2 eV and 1.7x10 23 cm -3 , were determined from the plasmon frequency shift and the relative intensity of the elastic and inelastic scattering features in the collective scattering regime. The observation of plasmon scattering at coalescence indicates a transition to the dense metallic state in LiH. The density and temperature regimes accessed in these experiments are relevant for inertial confinement fusion experiments and for the study of planetary formation.

K-(alpha) X-ray Thomson Scattering From Dense Plasmas

International Nuclear Information System (INIS)

Kritcher, A.L.; Neumayer, P.; Castor, J.; Doppner, T.; Falcone, R.W.; Landen, O.L.; Lee, H.J.; Lee, R.W.; Morse, E.C.; Ng, A.; Pollaine, S.; Price, D.; Glenzer, S.H.

2009-01-01

Spectrally resolved Thomson scattering using ultra-fast K-α x-rays has measured the compression and heating of shocked compressed matter. The evolution and coalescence of two shock waves traveling through a solid density LiH target were characterized by the elastic scattering component. The density and temperature at shock coalescence, 2.2 eV and 1.7 x 10 23 cm -3 , were determined from the plasmon frequency shift and the relative intensity of the elastic and inelastic scattering features in the collective scattering regime. The observation of plasmon scattering at coalescence indicates a transition to the dense metallic state in LiH. The density and temperature regimes accessed in these experiments are relevant for inertial confinement fusion experiments and for the study of planetary formation

Prediction of a Densely Loaded Particle-Laden Jet using a Euler-Lagrange Dense Spray Model

Science.gov (United States)

Pakseresht, Pedram; Apte, Sourabh V.

2017-11-01

Modeling of a dense spray regime using an Euler-Lagrange discrete-element approach is challenging because of local high volume loading. A subgrid cluster of droplets can lead to locally high void fractions for the disperse phase. Under these conditions, spatio-temporal changes in the carrier phase volume fractions, which are commonly neglected in spray simulations in an Euler-Lagrange two-way coupling model, could become important. Accounting for the carrier phase volume fraction variations, leads to zero-Mach number, variable density governing equations. Using pressure-based solvers, this gives rise to a source term in the pressure Poisson equation and a non-divergence free velocity field. To test the validity and predictive capability of such an approach, a round jet laden with solid particles is investigated using Direct Numerical Simulation and compared with available experimental data for different loadings. Various volume fractions spanning from dilute to dense regimes are investigated with and without taking into account the volume displacement effects. The predictions of the two approaches are compared and analyzed to investigate the effectiveness of the dense spray model. Financial support was provided by National Aeronautics and Space Administration (NASA).

Ultra High Intensity laser produced fast electron transport in under-dense and over-dense matter

International Nuclear Information System (INIS)

Manclossi, Mauro

2006-01-01

This thesis is related to inertial fusion research, and particularly concerns the approach to fast ignition, which is based on the use of ultra-intense laser pulses to ignite the thermonuclear fuel. Until now, the feasibility of this scheme has not been proven and depends on many fundamental aspects of the underlying physics, which are not yet fully understood and which are also very far from controls. The main purpose of this thesis is the experimental study of transport processes in the material over-dense (solid) and under-dense (gas jet) of a beam of fast electrons produced by pulse laser at a intensity of some 10 19 Wcm -2 . (author)

Influence of galactic arm scale dynamics on the molecular composition of the cold and dense ISM. I. Observed abundance gradients in dense clouds

Science.gov (United States)

Ruaud, M.; Wakelam, V.; Gratier, P.; Bonnell, I. A.

2018-04-01

Aim. We study the effect of large scale dynamics on the molecular composition of the dense interstellar medium during the transition between diffuse to dense clouds. Methods: We followed the formation of dense clouds (on sub-parsec scales) through the dynamics of the interstellar medium at galactic scales. We used results from smoothed particle hydrodynamics (SPH) simulations from which we extracted physical parameters that are used as inputs for our full gas-grain chemical model. In these simulations, the evolution of the interstellar matter is followed for 50 Myr. The warm low-density interstellar medium gas flows into spiral arms where orbit crowding produces the shock formation of dense clouds, which are held together temporarily by the external pressure. Results: We show that depending on the physical history of each SPH particle, the molecular composition of the modeled dense clouds presents a high dispersion in the computed abundances even if the local physical properties are similar. We find that carbon chains are the most affected species and show that these differences are directly connected to differences in (1) the electronic fraction, (2) the C/O ratio, and (3) the local physical conditions. We argue that differences in the dynamical evolution of the gas that formed dense clouds could account for the molecular diversity observed between and within these clouds. Conclusions: This study shows the importance of past physical conditions in establishing the chemical composition of the dense medium.

Dense chlorinated solvents and other DNAPLs in groundwater

DEFF Research Database (Denmark)

Broholm, K.

1996-01-01

Anmeldelse af Pankow,J.F. & Cherry,J.A.: Dense chlorinated solvents and other DNAPLs in groundwater. Waterloo Press, Portland, Oregon, USA, 1996......Anmeldelse af Pankow,J.F. & Cherry,J.A.: Dense chlorinated solvents and other DNAPLs in groundwater. Waterloo Press, Portland, Oregon, USA, 1996...

Is dense codeswitching complex?

NARCIS (Netherlands)

Dorleijn, M.

In this paper the question is raised to what extent dense code switching can be considered complex. Psycholinguistic experiments indicate that code switching involves cognitive costs, both in production and comprehension, a conclusion that could indicate that code switching is indeed complex. In

1991 US-Japan workshop on Nuclear Fusion in Dense Plasmas

International Nuclear Information System (INIS)

Ichimaru, S.; Tajima, T.

1991-10-01

The scientific areas covered at the Workshop may be classified into the following subfields: (1) basic theory of dense plasma physics and its interface with atomic physics and nuclear physics; (2) physics of dense z-pinches, ICF plasmas etc; (3) stellar interior plasmas; (4) cold fusion; and (5) other dense plasmas

Finding Hierarchical and Overlapping Dense Subgraphs using Nucleus Decompositions

Energy Technology Data Exchange (ETDEWEB)

Seshadhri, Comandur [The Ohio State Univ., Columbus, OH (United States); Pinar, Ali [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Sariyuce, Ahmet Erdem [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Catalyurek, Umit [The Ohio State Univ., Columbus, OH (United States)

2014-11-01

Finding dense substructures in a graph is a fundamental graph mining operation, with applications in bioinformatics, social networks, and visualization to name a few. Yet most standard formulations of this problem (like clique, quasiclique, k-densest subgraph) are NP-hard. Furthermore, the goal is rarely to nd the \\true optimum", but to identify many (if not all) dense substructures, understand their distribution in the graph, and ideally determine a hierarchical structure among them. Current dense subgraph nding algorithms usually optimize some objective, and only nd a few such subgraphs without providing any hierarchy. It is also not clear how to account for overlaps in dense substructures. We de ne the nucleus decomposition of a graph, which represents the graph as a forest of nuclei. Each nucleus is a subgraph where smaller cliques are present in many larger cliques. The forest of nuclei is a hierarchy by containment, where the edge density increases as we proceed towards leaf nuclei. Sibling nuclei can have limited intersections, which allows for discovery of overlapping dense subgraphs. With the right parameters, the nuclear decomposition generalizes the classic notions of k-cores and k-trusses. We give provable e cient algorithms for nuclear decompositions, and empirically evaluate their behavior in a variety of real graphs. The tree of nuclei consistently gives a global, hierarchical snapshot of dense substructures, and outputs dense subgraphs of higher quality than other state-of-theart solutions. Our algorithm can process graphs with tens of millions of edges in less than an hour.

Influence of heart failure on nucleolar organization and protein expression in human hearts

International Nuclear Information System (INIS)

Roselló-Lletí, Esther; Rivera, Miguel; Cortés, Raquel; Azorín, Inmaculada; Sirera, Rafael; Martínez-Dolz, Luis; Hove, Leif; Cinca, Juan; Lago, Francisca; González-Juanatey, José R.; Salvador, Antonio; Portolés, Manuel

2012-01-01

Highlights: ► Heart failure alters nucleolar morphology and organization. ► Nucleolin expression is significant increased in ischemic and dilated cardiomyopathy. ► Ventricular function of heart failure patients was related with nucleolin levels. -- Abstract: We investigate for the first time the influence of heart failure (HF) on nucleolar organization and proteins in patients with ischemic (ICM) or dilated cardiomyopathy (DCM). A total of 71 human hearts from ICM (n = 38) and DCM (n = 27) patients, undergoing heart transplantation and control donors (n = 6), were analysed by western-blotting, RT-PCR and cell biology methods. When we compared protein levels according to HF etiology, nucleolin was increased in both ICM (117%, p < 0.05) and DCM (141%, p < 0.01). Moreover, mRNA expression were also upregulated in ICM (1.46-fold, p < 0.05) and DCM (1.70-fold, p < 0.05. Immunofluorescence studies showed that the highest intensity of nucleolin was into nucleolus (p < 0.0001), and it was increased in pathological hearts (p < 0.0001). Ultrastructure analysis by electron microscopy showed an increase in the nucleus and nucleolus size in ICM (17%, p < 0.05 and 131%, p < 0.001) and DCM (56%, p < 0.01 and 69%, p < 0.01). Nucleolar organization was influenced by HF irrespective of etiology, increasing fibrillar centers (p < 0.001), perinucleolar chromatin (p < 0.01) and dense fibrillar components (p < 0.01). Finally, left ventricular function parameters were related with nucleolin levels in ischemic hearts (p < 0.0001). The present study demonstrates that HF influences on morphology and organization of nucleolar components, revealing changes in the expression and in the levels of nucleolin protein.

Dense ceramic articles

International Nuclear Information System (INIS)

Cockbain, A.G.

1976-01-01

A method is described for the manufacture of articles of substantially pure dense ceramic materials, for use in severe environments. Si N is very suitable for use in such environments, but suffers from the disadvantage that it is not amenable to sintering. Some disadvantages of the methods normally used for making articles of Si N are mentioned. The method described comprises mixing a powder of the substantially pure ceramic material with an additive that promotes densification, and which is capable of nuclear transmutation into a gas when exposed to radiation, and hot pressing the mixture to form a billet. The billet is then irradiated to convert the additive into a gas which is held captive in the billet, and it is then subjected to a hot forging operation, during which the captive gas escapes and an article of substantially pure dense ceramic material is forged. The method is intended primarily for use for Si N, but may be applied to other ceramic materials. The additive may be Li or Be or their compounds, to the extent of at least 5 ppm and not more than 5% by weight. Irradiation is effected by proton or neutron bombardment. (UK)

Rayleigh-Taylor/gravitational instability in dense magnetoplasmas

Energy Technology Data Exchange (ETDEWEB)

Ali, S., E-mail: shahid.ali@ncp.edu.p [National Centre for Physics, Quaid-i-Azam University Campus, Islamabad (Pakistan); IPFN, Instituto Superior Tecnico, Av. Rovisco Pais, 1049-001 Lisboa (Portugal); Ahmed, Z. [COMSATS Institute of Information Technology, Department of Physics, Wah Campus (Pakistan); Mirza, Arshad M. [Theoretical Plasma Physics Group, Physics Department, Quaid-i-Azam University, Islamabad 45320 (Pakistan); Ahmad, I. [COMSATS Institute of Information Technology, Department of Physics, Islamabad Campus (Pakistan)

2009-08-10

The Rayleigh-Taylor instability is investigated in a nonuniform dense quantum magnetoplasma. For this purpose, a quantum hydrodynamical model is used for the electrons whereas the ions are assumed to be cold and classical. The dispersion relation for the Rayleigh-Taylor instability becomes modified with the quantum corrections associated with the Fermi pressure law and the quantum Bohm potential force. Numerically, it is found that the quantum speed and density gradient significantly modify the growth rate of RT instability. In a dense quantum magnetoplasma case, the linear growth rate of RT instability becomes significantly higher than its classical value and the modes are found to be highly localized. The present investigation should be useful in the studies of dense astrophysical magnetoplasmas as well as in laser-produced plasmas.

Rayleigh-Taylor/gravitational instability in dense magnetoplasmas

International Nuclear Information System (INIS)

Ali, S.; Ahmed, Z.; Mirza, Arshad M.; Ahmad, I.

2009-01-01

The Rayleigh-Taylor instability is investigated in a nonuniform dense quantum magnetoplasma. For this purpose, a quantum hydrodynamical model is used for the electrons whereas the ions are assumed to be cold and classical. The dispersion relation for the Rayleigh-Taylor instability becomes modified with the quantum corrections associated with the Fermi pressure law and the quantum Bohm potential force. Numerically, it is found that the quantum speed and density gradient significantly modify the growth rate of RT instability. In a dense quantum magnetoplasma case, the linear growth rate of RT instability becomes significantly higher than its classical value and the modes are found to be highly localized. The present investigation should be useful in the studies of dense astrophysical magnetoplasmas as well as in laser-produced plasmas.

Fast Solvers for Dense Linear Systems

Energy Technology Data Exchange (ETDEWEB)

Kauers, Manuel [Research Institute for Symbolic Computation (RISC), Altenbergerstrasse 69, A4040 Linz (Austria)

2008-10-15

It appears that large scale calculations in particle physics often require to solve systems of linear equations with rational number coefficients exactly. If classical Gaussian elimination is applied to a dense system, the time needed to solve such a system grows exponentially in the size of the system. In this tutorial paper, we present a standard technique from computer algebra that avoids this exponential growth: homomorphic images. Using this technique, big dense linear systems can be solved in a much more reasonable time than using Gaussian elimination over the rationals.

OH megamasers: dense gas & the infrared radiation field

Science.gov (United States)

Huang, Yong; Zhang, JiangShui; Liu, Wei; Xu, Jie

2018-06-01

To investigate possible factors related to OH megamaser formation (OH MM, L_{H2O}>10L_{⊙}), we compiled a large HCN sample from all well-sampled HCN measurements so far in local galaxies and identified with the OH MM, OH kilomasers (L_{H2O}gas and the dense gas, respectively), we found that OH MM galaxies tend to have stronger HCN emission and no obvious difference on CO luminosity exists between OH MM and non-OH MM. This implies that OH MM formation should be related to the dense molecular gas, instead of the low-density molecular gas. It can be also supported by other facts: (1) OH MMs are confirmed to have higher mean molecular gas density and higher dense gas fraction (L_{HCN}/L_{CO}) than non-OH MMs. (2) After taking the distance effect into account, the apparent maser luminosity is still correlated with the HCN luminosity, while no significant correlation can be found at all between the maser luminosity and the CO luminosity. (3) The OH kMs tend to have lower values than those of OH MMs, including the dense gas luminosity and the dense gas fraction. (4) From analysis of known data of another dense gas tracer HCO^+, similar results can also be obtained. However, from our analysis, the infrared radiation field can not be ruled out for the OH MM trigger, which was proposed by previous works on one small sample (Darling in ApJ 669:L9, 2007). On the contrary, the infrared radiation field should play one more important role. The dense gas (good tracers of the star formation) and its surrounding dust are heated by the ultra-violet (UV) radiation generated by the star formation and the heating of the high-density gas raises the emission of the molecules. The infrared radiation field produced by the re-radiation of the heated dust in turn serves for the pumping of the OH MM.

Automated Motion Estimation for 2D Cine DENSE MRI

Science.gov (United States)

Gilliam, Andrew D.; Epstein, Frederick H.

2013-01-01

Cine displacement encoding with stimulated echoes (DENSE) is a magnetic resonance (MR) method that directly encodes tissue displacement into MR phase images. This technique has successfully interrogated many forms of tissue motion, but is most commonly used to evaluate cardiac mechanics. Currently, motion analysis from cine DENSE images requires manually delineated anatomical structures. An automated analysis would improve measurement throughput, simplify data interpretation, and potentially access important physiological information during the MR exam. In this article, we present the first fully automated solution for the estimation of tissue motion and strain from 2D cine DENSE data. Results using both simulated and human cardiac cine DENSE data indicate good agreement between the automated algorithm and the standard semi-manual analysis method. PMID:22575669

Gas suspension flows of a moderately dense binary mixture of solid particles in vertical tubes

Energy Technology Data Exchange (ETDEWEB)

Zamankhan, P.; Huotari, J. [VTT Energy, Jyvaeskylae (Finland). Combustion and Conversion Lab.

1996-12-01

The turbulent, steady, fully-developed flow of a moderately dense (solid volume faction >>0.001) binary mixture of spherical particles in a gaseous carrier is investigated for the case of flow in a vertical riser. The suspended particles are considered to be in turbulent motion, driven by random aerodynamic forces acting between the particle and the gaseous carrier as well as particle-particle interactive forces. A model is constructed based on the combination of the time-averaged after volume-averaged conservation equations of mass, momentum and mechanical energy of the gas phase in the continuum theory and the corresponding equations for the solid particles obtained using the recently developed Enskog theory for dense multi-component mixtures of slightly inelastic spherical particles. The model properly takes into account the contributions of particle-particle collisions, as well as the fluid-dynamic fluctuating forces on individual particles. To demonstrate the validity of this approach, the fully-developed steady-state mean velocity and concentration distributions of a moderately dense binary mixture of solid particles in a turbulent vertical flow calculated by the present model are compared with available experimental measurements. The results provide a qualitative description of the experimentally observed motion of coarse particles in a fast bed of fine solids. (author)

Quantum Dense Coding About a Two-Qubit Heisenberg XYZ Model

Science.gov (United States)

Xu, Hui-Yun; Yang, Guo-Hui

2017-09-01

By taking into account the nonuniform magnetic field, the quantum dense coding with thermal entangled states of a two-qubit anisotropic Heisenberg XYZ chain are investigated in detail. We mainly show the different properties about the dense coding capacity ( χ) with the changes of different parameters. It is found that dense coding capacity χ can be enhanced by decreasing the magnetic field B, the degree of inhomogeneity b and temperature T, or increasing the coupling constant along z-axis J z . In addition, we also find χ remains the stable value as the change of the anisotropy of the XY plane Δ in a certain temperature condition. Through studying different parameters effect on χ, it presents that we can properly turn the values of B, b, J z , Δ or adjust the temperature T to obtain a valid dense coding capacity ( χ satisfies χ > 1). Moreover, the temperature plays a key role in adjusting the value of dense coding capacity χ. The valid dense coding capacity could be always obtained in the lower temperature-limit case.

Photons in dense nuclear matter: Random-phase approximation

Science.gov (United States)

Stetina, Stephan; Rrapaj, Ermal; Reddy, Sanjay

2018-04-01

We present a comprehensive and pedagogic discussion of the properties of photons in cold and dense nuclear matter based on the resummed one-loop photon self-energy. Correlations among electrons, muons, protons, and neutrons in β equilibrium that arise as a result of electromagnetic and strong interactions are consistently taken into account within the random phase approximation. Screening effects, damping, and collective excitations are systematically studied in a fully relativistic setup. Our study is relevant to the linear response theory of dense nuclear matter, calculations of transport properties of cold dense matter, and investigations of the production and propagation of hypothetical vector bosons such as the dark photons.

Collective dynamics in dense fluid mixtures

International Nuclear Information System (INIS)

Sinha, S.

1992-01-01

This thesis deals with the short wavelength collective dynamics of dense binary fluid mixtures. The analysis shows that at the level of linearized generalized hydrodynamics, the longitudinal modes of the system separates essentially into two parts - one involves the coupling of partial density fluctuations of the two species and the other involves coupling of longitudinal momentum and temperature fluctuations. The authors have shown that the coupling of longitudinal momentum and temperature fluctuations leads to an adequate description of sound propagation in such systems. In particular, they show that structural disorder controls the trapping of sound waves in dense mixtures. The coupling of the partial density fluctuations of the two species leads to a simple description of the partial dynamic structure factors. The results are in agreement with the molecular dynamics simulations of soft sphere mixtures. The partial density fluctuations are the slowest decaying fluctuations on molecular length scales and it turns out that nonlinear coupling of these slow modes leads to important corrections to the long time behavior of the time correlation functions determining the shear viscosity in dense mixtures

Simulation of dense colloids

NARCIS (Netherlands)

Herrmann, H.J.; Harting, J.D.R.; Hecht, M.; Ben-Naim, E.

2008-01-01

We present in this proceeding recent large scale simulations of dense colloids. On one hand we simulate model clay consisting of nanometric aluminum oxide spheres in water using realistic DLVO potentials and a combination of MD and SRD. We find pronounced cluster formation and retrieve the shear

Atoms in dense plasmas

International Nuclear Information System (INIS)

More, R.M.

1987-01-01

This paper covers some aspects of the theory of atomic processes in dense plasmas. Because the topic is very broad, a few general rules which give useful guidance about the typical behavior of dense plasmas have been selected. These rules are illustrated by semiclassical estimates, scaling laws and appeals to more elaborate calculations. Included in the paper are several previously unpublished results including a new mechanism for electron-ion heat exchange (section II), and an approximate expression for oscillator-strengths of highly charged ions (section V). However the main emphasis is not upon practical formulas but rather on questions of fundamental theory, the structural ingredients which must be used in building a model for plasma events. What are the density effects and how does one represent them? Which are most important? How does one identify an incorrect theory? The general rules help to answer these questions. 106 references, 23 figures, 2 tables

Suprathermal viscosity of dense matter

International Nuclear Information System (INIS)

Alford, Mark; Mahmoodifar, Simin; Schwenzer, Kai

2010-01-01

Motivated by the existence of unstable modes of compact stars that eventually grow large, we study the bulk viscosity of dense matter, taking into account non-linear effects arising in the large amplitude regime, where the deviation μ Δ of the chemical potentials from chemical equilibrium fulfills μ Δ > or approx. T. We find that this supra-thermal bulk viscosity can provide a potential mechanism for saturating unstable modes in compact stars since the viscosity is strongly enhanced. Our study confirms previous results on strange quark matter and shows that the suprathermal enhancement is even stronger in the case of hadronic matter. We also comment on the competition of different weak channels and the presence of suprathermal effects in various color superconducting phases of dense quark matter.

Coalescence preference in dense packing of bubbles

Science.gov (United States)

Kim, Yeseul; Gim, Bopil; Gim, Bopil; Weon, Byung Mook

2015-11-01

Coalescence preference is the tendency that a merged bubble from the contact of two original bubbles (parent) tends to be near to the bigger parent. Here, we show that the coalescence preference can be blocked by densely packing of neighbor bubbles. We use high-speed high-resolution X-ray microscopy to clearly visualize individual coalescence phenomenon which occurs in micro scale seconds and inside dense packing of microbubbles with a local packing fraction of ~40%. Previous theory and experimental evidence predict a power of -5 between the relative coalescence position and the parent size. However, our new observation for coalescence preference in densely packed microbubbles shows a different power of -2. We believe that this result may be important to understand coalescence dynamics in dense packing of soft matter. This work (NRF-2013R1A22A04008115) was supported by Mid-career Researcher Program through NRF grant funded by the MEST and also was supported by Ministry of Science, ICT and Future Planning (2009-0082580) and by Basic Science Research Program through the National Research Foundation of Korea (NRF) funded by the Ministry and Education, Science and Technology (NRF-2012R1A6A3A04039257).

Fibrillar organization in tendons: A pattern revealed by percolation characteristics of the respective geometric network

Directory of Open Access Journals (Sweden)

Daniel Andres Dos Santos

2014-06-01

Full Text Available Since the tendon is composed by collagen fibrils of various sizes connected between them through molecular cross-links, it sounds logical to model it via a heterogeneous network of fibrils. Using cross sectional images, that network is operatively inferred from the respective Gabriel graph of the fibril mass centers. We focus on network percolation characteristics under an ordered activation of fibrils (progressive recruitment going from the smallest to the largest fibril. Analyses of percolation were carried out on a repository of images of digital flexor tendons obtained from samples of lizards and frogs. Observed percolation thresholds were compared against values derived from hypothetical scenarios of random activation of nodes. Strikingly, we found a significant delay for the occurrence of percolation in actual data. We interpret this finding as the consequence of some non-random packing of fibrillar units into a size-constrained geometric pattern. We erect an ideal geometric model of balanced interspersion of polymorphic units that accounts for the delayed percolating instance. We also address the circumstance of being percolation curves mirrored by the empirical curves of stress-strain obtained from the same studied tendons. By virtue of this isomorphism, we hypothesize that the inflection points of both curves are different quantitative manifestations of a common transitional process during mechanical load transference.

Dense Output for Strong Stability Preserving Runge–Kutta Methods

KAUST Repository

Ketcheson, David I.; Loczi, Lajos; Jangabylova, Aliya; Kusmanov, Adil

2016-01-01

We investigate dense output formulae (also known as continuous extensions) for strong stability preserving (SSP) Runge–Kutta methods. We require that the dense output formula also possess the SSP property, ideally under the same step

Thermodynamics of two component gaseous and solid state plasmas at any degeneracy

International Nuclear Information System (INIS)

Kraeft, W.D.; Stolzmann, W.; Fromhold-Treu, I.; Rother, T.

1988-10-01

We give the results of thermodynamical calculations for two component plasmas which are of interest for dense hydrogen, noble gas and alkali plasmas and for electron hole plasmas in optically excited semiconductors as well. 25 refs, 4 figs

Modelling dense relational data

DEFF Research Database (Denmark)

Herlau, Tue; Mørup, Morten; Schmidt, Mikkel Nørgaard

2012-01-01

they are not naturally suited for kernel K-means. We propose a generative Bayesian model for dense matrices which generalize kernel K-means to consider off-diagonal interactions in matrices of interactions, and demonstrate its ability to detect structure on both artificial data and two real data sets....

Cavola experiment site: geophysical investigations and deployment of a dense seismic array on a landslide

OpenAIRE

L. Martelli; M. Cercato; P. Augliera; G. Di Giulio; G. Milana; J. Haines; P. Bordoni; F. Cara; undefined Cavola Experiment Team

2007-01-01

Geophysical site investigations have been performed in association with deployment of a dense array of 95 3-component seismometers on the Cavola landslide in the Northern Apennines. The aim of the array is to study propagation of seismic waves in the heterogeneous medium through comparison of observation and modelling. The small-aperture array (130 m×56 m) operated continuously for three months in 2004. Cavola landslide consists of a clay body sliding over mudstone-shale b...

The value of the photoreactivable component in E. coli Bsub(s-1) cells exposed to densely and sparsely ionizing radiations

International Nuclear Information System (INIS)

Myasnik, M.N.; Morozov, I.I.; Petin, V.G.

1980-01-01

The dependence of the photoreactivation effect in E coli Bsub(s-1) cells on LET and energy of sparsely ionizing radiation was studied. The photoreactivation was shown to be absent after densely ionizing radiation (α-particles of 239 Pu; fast neutron Esub(n) = 0.85 MeV) and after sparsely ionizing radiation with energies below 200 keV. In those cases where photoreactivation took place, the photoreactivable sector was found to increase with the voltage of the radiation. (author)

Hybrid-Based Dense Stereo Matching

Science.gov (United States)

Chuang, T. Y.; Ting, H. W.; Jaw, J. J.

2016-06-01

Stereo matching generating accurate and dense disparity maps is an indispensable technique for 3D exploitation of imagery in the fields of Computer vision and Photogrammetry. Although numerous solutions and advances have been proposed in the literature, occlusions, disparity discontinuities, sparse texture, image distortion, and illumination changes still lead to problematic issues and await better treatment. In this paper, a hybrid-based method based on semi-global matching is presented to tackle the challenges on dense stereo matching. To ease the sensitiveness of SGM cost aggregation towards penalty parameters, a formal way to provide proper penalty estimates is proposed. To this end, the study manipulates a shape-adaptive cross-based matching with an edge constraint to generate an initial disparity map for penalty estimation. Image edges, indicating the potential locations of occlusions as well as disparity discontinuities, are approved by the edge drawing algorithm to ensure the local support regions not to cover significant disparity changes. Besides, an additional penalty parameter 𝑃𝑒 is imposed onto the energy function of SGM cost aggregation to specifically handle edge pixels. Furthermore, the final disparities of edge pixels are found by weighting both values derived from the SGM cost aggregation and the U-SURF matching, providing more reliable estimates at disparity discontinuity areas. Evaluations on Middlebury stereo benchmarks demonstrate satisfactory performance and reveal the potency of the hybrid-based dense stereo matching method.

Breast cancer screening in Korean woman with dense breast tissue

International Nuclear Information System (INIS)

Shin, Hee Jung; Ko, Eun Sook; Yi, Ann

2015-01-01

Asian women, including Korean, have a relatively higher incidence of dense breast tissue, compared with western women. Dense breast tissue has a lower sensitivity for the detection of breast cancer and a higher relative risk for breast cancer, compared with fatty breast tissue. Thus, there were limitations in the mammographic screening for women with dense breast tissue, and many studies for the supplemental screening methods. This review included appropriate screening methods for Korean women with dense breasts. We also reviewed the application and limitation of supplemental screening methods, including breast ultrasound, digital breast tomosynthesis, and breast magnetic resonance imaging; and furthermore investigated the guidelines, as well as the study results

Breast cancer screening in Korean woman with dense breast tissue

Energy Technology Data Exchange (ETDEWEB)

Shin, Hee Jung [Dept. of Radiology and Research Institute of Radiology, University of Ulsan College of Medicine, Asan Medical Center, Seoul (Korea, Republic of); Ko, Eun Sook [Dept. of Radiology, Sungkyunkwan University School of Medicine, Samsung Medical Center, Seoul (Korea, Republic of); Yi, Ann [Dept. of Radiology, Seoul National University College of Medicine, Seoul National University Hospital, Seoul (Korea, Republic of)

2015-11-15

Asian women, including Korean, have a relatively higher incidence of dense breast tissue, compared with western women. Dense breast tissue has a lower sensitivity for the detection of breast cancer and a higher relative risk for breast cancer, compared with fatty breast tissue. Thus, there were limitations in the mammographic screening for women with dense breast tissue, and many studies for the supplemental screening methods. This review included appropriate screening methods for Korean women with dense breasts. We also reviewed the application and limitation of supplemental screening methods, including breast ultrasound, digital breast tomosynthesis, and breast magnetic resonance imaging; and furthermore investigated the guidelines, as well as the study results.

Arbitrary electron acoustic waves in degenerate dense plasmas

Science.gov (United States)

Rahman, Ata-ur; Mushtaq, A.; Qamar, A.; Neelam, S.

2017-05-01

A theoretical investigation is carried out of the nonlinear dynamics of electron-acoustic waves in a collisionless and unmagnetized plasma whose constituents are non-degenerate cold electrons, ultra-relativistic degenerate electrons, and stationary ions. A dispersion relation is derived for linear EAWs. An energy integral equation involving the Sagdeev potential is derived, and basic properties of the large amplitude solitary structures are investigated in such a degenerate dense plasma. It is shown that only negative large amplitude EA solitary waves can exist in such a plasma system. The present analysis may be important to understand the collective interactions in degenerate dense plasmas, occurring in dense astrophysical environments as well as in laser-solid density plasma interaction experiments.

Separation of replication and transcription domains in nucleoli.

Science.gov (United States)

Smirnov, E; Borkovec, J; Kováčik, L; Svidenská, S; Schröfel, A; Skalníková, M; Švindrych, Z; Křížek, P; Ovesný, M; Hagen, G M; Juda, P; Michalová, K; Cardoso, M C; Cmarko, D; Raška, I

2014-12-01

In mammalian cells, active ribosomal genes produce the 18S, 5.8S and 28S RNAs of ribosomal particles. Transcription levels of these genes are very high throughout interphase, and the cell needs a special strategy to avoid collision of the DNA polymerase and RNA polymerase machineries. To investigate this problem, we measured the correlation of various replication and transcription signals in the nucleoli of HeLa, HT-1080 and NIH 3T3 cells using a specially devised software for analysis of confocal images. Additionally, to follow the relationship between nucleolar replication and transcription in living cells, we produced a stable cell line expressing GFP-RPA43 (subunit of RNA polymerase I, pol I) and RFP-PCNA (the sliding clamp protein) based on human fibrosarcoma HT-1080 cells. We found that replication and transcription signals are more efficiently separated in nucleoli than in the nucleoplasm. In the course of S phase, separation of PCNA and pol I signals gradually increased. During the same period, separation of pol I and incorporated Cy5-dUTP signals decreased. Analysis of single molecule localization microscopy (SMLM) images indicated that transcriptionally active FC/DFC units (i.e. fibrillar centers with adjacent dense fibrillar components) did not incorporate DNA nucleotides. Taken together, our data show that replication of the ribosomal genes is spatially separated from their transcription, and FC/DFC units may provide a structural basis for that separation. Copyright © 2014 Elsevier Inc. All rights reserved.

Two Novel Rab2 Interactors Regulate Dense-core Vesicle Maturation

Science.gov (United States)

Ailion, Michael; Hannemann, Mandy; Dalton, Susan; Pappas, Andrea; Watanabe, Shigeki; Hegermann, Jan; Liu, Qiang; Han, Hsiao-Fen; Gu, Mingyu; Goulding, Morgan Q.; Sasidharan, Nikhil; Schuske, Kim; Hullett, Patrick; Eimer, Stefan; Jorgensen, Erik M.

2014-01-01

Summary Peptide neuromodulators are released from a unique organelle: the dense-core vesicle. Dense-core vesicles are generated at the trans-Golgi, and then sort cargo during maturation before being secreted. To identify proteins that act in this pathway, we performed a genetic screen in Caenorhabditis elegans for mutants defective in dense-core vesicle function. We identified two conserved Rab2-binding proteins: RUND-1, a RUN domain protein, and CCCP-1, a coiled-coil protein. RUND-1 and CCCP-1 colocalize with RAB-2 at the Golgi, and rab-2, rund-1 and cccp-1 mutants have similar defects in sorting soluble and transmembrane dense-core vesicle cargos. RUND-1 also interacts with the Rab2 GAP protein TBC-8 and the BAR domain protein RIC-19, a RAB-2 effector. In summary, a new pathway of conserved proteins controls the maturation of dense-core vesicles at the trans-Golgi network. PMID:24698274

Dense power-law networks and simplicial complexes

Science.gov (United States)

Courtney, Owen T.; Bianconi, Ginestra

2018-05-01

There is increasing evidence that dense networks occur in on-line social networks, recommendation networks and in the brain. In addition to being dense, these networks are often also scale-free, i.e., their degree distributions follow P (k ) ∝k-γ with γ ∈(1 ,2 ] . Models of growing networks have been successfully employed to produce scale-free networks using preferential attachment, however these models can only produce sparse networks as the numbers of links and nodes being added at each time step is constant. Here we present a modeling framework which produces networks that are both dense and scale-free. The mechanism by which the networks grow in this model is based on the Pitman-Yor process. Variations on the model are able to produce undirected scale-free networks with exponent γ =2 or directed networks with power-law out-degree distribution with tunable exponent γ ∈(1 ,2 ) . We also extend the model to that of directed two-dimensional simplicial complexes. Simplicial complexes are generalization of networks that can encode the many body interactions between the parts of a complex system and as such are becoming increasingly popular to characterize different data sets ranging from social interacting systems to the brain. Our model produces dense directed simplicial complexes with power-law distribution of the generalized out-degrees of the nodes.

CHEMICAL AND PHYSICAL CHARACTERIZATION OF COLLAPSING LOW-MASS PRESTELLAR DENSE CORES

Energy Technology Data Exchange (ETDEWEB)

Hincelin, U. [Department of Chemistry, University of Virginia, Charlottesville, VA 22904 (United States); Commerçon, B. [Ecole Normale Supérieure de Lyon, CRAL, UMR 5574 du CNRS, Université Lyon I, 46 Allée d’Italie, F-69364 Lyon cedex 07 (France); Wakelam, V.; Hersant, F.; Guilloteau, S. [Univ. Bordeaux, LAB, UMR 5804, F-33270, Floirac (France); Herbst, E., E-mail: ugo.hincelin@gmail.com [Departments of Chemistry and Astronomy, University of Virginia, Charlottesville, VA 22904 (United States)

2016-05-01

The first hydrostatic core, also called the first Larson core, is one of the first steps in low-mass star formation as predicted by theory. With recent and future high-performance telescopes, the details of these first phases are becoming accessible, and observations may confirm theory and even present new challenges for theoreticians. In this context, from a theoretical point of view, we study the chemical and physical evolution of the collapse of prestellar cores until the formation of the first Larson core, in order to better characterize this early phase in the star formation process. We couple a state-of-the-art hydrodynamical model with full gas-grain chemistry, using different assumptions for the magnetic field strength and orientation. We extract the different components of each collapsing core (i.e., the central core, the outflow, the disk, the pseudodisk, and the envelope) to highlight their specific physical and chemical characteristics. Each component often presents a specific physical history, as well as a specific chemical evolution. From some species, the components can clearly be differentiated. The different core models can also be chemically differentiated. Our simulation suggests that some chemical species act as tracers of the different components of a collapsing prestellar dense core, and as tracers of the magnetic field characteristics of the core. From this result, we pinpoint promising key chemical species to be observed.

Eculizumab for dense deposit disease and C3 glomerulonephritis.

Science.gov (United States)

Bomback, Andrew S; Smith, Richard J; Barile, Gaetano R; Zhang, Yuzhou; Heher, Eliot C; Herlitz, Leal; Stokes, M Barry; Markowitz, Glen S; D'Agati, Vivette D; Canetta, Pietro A; Radhakrishnan, Jai; Appel, Gerald B

2012-05-01

The principle defect in dense deposit disease and C3 glomerulonephritis is hyperactivity of the alternative complement pathway. Eculizumab, a monoclonal antibody that binds to C5 to prevent formation of the membrane attack complex, may prove beneficial. In this open-label, proof of concept efficacy and safety study, six subjects with dense deposit disease or C3 glomerulonephritis were treated with eculizumab every other week for 1 year. All had proteinuria >1 g/d and/or AKI at enrollment. Subjects underwent biopsy before enrollment and repeat biopsy at the 1-year mark. The subjects included three patients with dense deposit disease (including one patient with recurrent dense deposit disease in allograft) and three patients with C3 glomerulonephritis (including two patients with recurrent C3 glomerulonephritis in allograft). Genetic and complement function testing revealed a mutation in CFH and MCP in one subject each, C3 nephritic factor in three subjects, and elevated levels of serum membrane attack complex in three subjects. After 12 months, two subjects showed significantly reduced serum creatinine, one subject achieved marked reduction in proteinuria, and one subject had stable laboratory parameters but histopathologic improvements. Elevated serum membrane attack complex levels normalized on therapy and paralleled improvements in creatinine and proteinuria. Clinical and histopathologic data suggest a response to eculizumab in some but not all subjects with dense deposit disease and C3 glomerulonephritis. Elevation of serum membrane attack complex before treatment may predict response. Additional research is needed to define the subgroup of dense deposit disease/C3 glomerulonephritis patients in whom eculizumab therapy can be considered.

Dilute and dense axion stars

Science.gov (United States)

Visinelli, Luca; Baum, Sebastian; Redondo, Javier; Freese, Katherine; Wilczek, Frank

2018-02-01

Axion stars are hypothetical objects formed of axions, obtained as localized and coherently oscillating solutions to their classical equation of motion. Depending on the value of the field amplitude at the core |θ0 | ≡ | θ (r = 0) |, the equilibrium of the system arises from the balance of the kinetic pressure and either self-gravity or axion self-interactions. Starting from a general relativistic framework, we obtain the set of equations describing the configuration of the axion star, which we solve as a function of |θ0 |. For small |θ0 | ≲ 1, we reproduce results previously obtained in the literature, and we provide arguments for the stability of such configurations in terms of first principles. We compare qualitative analytical results with a numerical calculation. For large amplitudes |θ0 | ≳ 1, the axion field probes the full non-harmonic QCD chiral potential and the axion star enters the dense branch. Our numerical solutions show that in this latter regime the axions are relativistic, and that one should not use a single frequency approximation, as previously applied in the literature. We employ a multi-harmonic expansion to solve the relativistic equation for the axion field in the star, and demonstrate that higher modes cannot be neglected in the dense regime. We interpret the solutions in the dense regime as pseudo-breathers, and show that the life-time of such configurations is much smaller than any cosmological time scale.

Neutrinos and Nucleosynthesis in Hot and Dense Matter

Energy Technology Data Exchange (ETDEWEB)

Fuller, George [Univ. of California, San Diego, CA (United States)

2016-01-14

The Topical Collaboration for Neutrinos and Nucleosynthesis in Hot and Dense matter brought together researchers from a variety of nuclear science specialties and a number of institutions to address nuclear physics and neutrino physics problems associated with dense matter and the origin of the elements. See attached final technical reports for (1) the UCSD award and (2) a copy of the report for the whole TC

Fabrication, Properties and Applications of Dense Hydroxyapatite: A Review

Science.gov (United States)

Prakasam, Mythili; Locs, Janis; Salma-Ancane, Kristine; Loca, Dagnija; Largeteau, Alain; Berzina-Cimdina, Liga

2015-01-01

In the last five decades, there have been vast advances in the field of biomaterials, including ceramics, glasses, glass-ceramics and metal alloys. Dense and porous ceramics have been widely used for various biomedical applications. Current applications of bioceramics include bone grafts, spinal fusion, bone repairs, bone fillers, maxillofacial reconstruction, etc. Amongst the various calcium phosphate compositions, hydroxyapatite, which has a composition similar to human bone, has attracted wide interest. Much emphasis is given to tissue engineering, both in porous and dense ceramic forms. The current review focusses on the various applications of dense hydroxyapatite and other dense biomaterials on the aspects of transparency and the mechanical and electrical behavior. Prospective future applications, established along the aforesaid applications of hydroxyapatite, appear to be promising regarding bone bonding, advanced medical treatment methods, improvement of the mechanical strength of artificial bone grafts and better in vitro/in vivo methodologies to afford more particular outcomes. PMID:26703750

Fabrication, Properties and Applications of Dense Hydroxyapatite: A Review

Directory of Open Access Journals (Sweden)

Mythili Prakasam

2015-12-01

Full Text Available In the last five decades, there have been vast advances in the field of biomaterials, including ceramics, glasses, glass-ceramics and metal alloys. Dense and porous ceramics have been widely used for various biomedical applications. Current applications of bioceramics include bone grafts, spinal fusion, bone repairs, bone fillers, maxillofacial reconstruction, etc. Amongst the various calcium phosphate compositions, hydroxyapatite, which has a composition similar to human bone, has attracted wide interest. Much emphasis is given to tissue engineering, both in porous and dense ceramic forms. The current review focusses on the various applications of dense hydroxyapatite and other dense biomaterials on the aspects of transparency and the mechanical and electrical behavior. Prospective future applications, established along the aforesaid applications of hydroxyapatite, appear to be promising regarding bone bonding, advanced medical treatment methods, improvement of the mechanical strength of artificial bone grafts and better in vitro/in vivo methodologies to afford more particular outcomes.

Hugoniot measurements of double-shocked precompressed dense xenon plasmas

Science.gov (United States)

Zheng, J.; Chen, Q. F.; Gu, Y. J.; Chen, Z. Y.

2012-12-01

The current partially ionized plasmas models for xenon show substantial differences since the description of pressure and thermal ionization region becomes a formidable task, prompting the need for an improved understanding of dense xenon plasmas behavior at above 100 GPa. We performed double-shock compression experiments on dense xenon to determine accurately the Hugoniot up to 172 GPa using a time-resolved optical radiation method. The planar strong shock wave was produced using a flyer plate impactor accelerated up to ˜6 km/s with a two-stage light-gas gun. The time-resolved optical radiation histories were acquired by using a multiwavelength channel optical transience radiance pyrometer. Shock velocity was measured and mass velocity was determined by the impedance-matching methods. The experimental equation of state of dense xenon plasmas are compared with the self-consistent fluid variational calculations of dense xenon in the region of partial ionization over a wide range of pressures and temperatures.

Dense time discretization technique for verification of real time systems

International Nuclear Information System (INIS)

Makackas, Dalius; Miseviciene, Regina

2016-01-01

Verifying the real-time system there are two different models to control the time: discrete and dense time based models. This paper argues a novel verification technique, which calculates discrete time intervals from dense time in order to create all the system states that can be reached from the initial system state. The technique is designed for real-time systems specified by a piece-linear aggregate approach. Key words: real-time system, dense time, verification, model checking, piece-linear aggregate

About chiral models of dense matter and its magnetic properties

International Nuclear Information System (INIS)

Kutschera, M.

1990-12-01

The chiral models of dense nucleon matter are discussed. The quark matter with broken chiral symmetry is described. The magnetic properties of dense matter are presented and conclusions are given. 37 refs. (A.S.)

Rheology of dense suspensions of non colloidal particles

OpenAIRE

Guazzelli , Elisabeth

2017-01-01

International audience; Dense suspensions are materials with broad applications both in industrial processes (e.g. waste disposal, concrete, drilling muds, metalworking chip transport, and food processing) and in natural phenomena (e.g. flows of slurries, debris, and lava). Despite its long research history and its practical relevance, the mechanics of dense suspensions remain poorly understood. The major difficulty is that the grains interact both by hydrodynamic interactions through the liq...

Altered gravity influences rDNA and NopA100 localization in nucleoli

Science.gov (United States)

Sobol, M. A.; Kordyum, E. L.

Fundamental discovery of gravisensitivity of cells no specified to gravity perception focused increasing attention on an elucidation of the mechanisms involved in altered gravity effects at the cellular and subcellular levels. The nucleolus is the transcription site of rRNA genes as well as the site of processing and initial packaging of their transcripts with ribosomal and nonribosomal proteins. The mechanisms inducing the changes in the subcomponents of the nucleolus that is morphologically defined yet highly dynamic structure are still unknown in detail. To understand the functional organization of the nucleolus as in the control as under altered gravity conditions it is essential to determine both the precise location of rDNA and the proteins playing the key role in rRNA processing. Lepidium sativum seeds were germinated in 1% agar medium on the slow horizontal clinostat (2 rpm) and in the stationary conditions. We investigated the root meristematic cells dissected from the seedlings grown in darkness for two days. The investigations were carried out with anti-DNA and anti-NopA100 antibodies labeling as well as with TdT procedure, and immunogold electron microscopy. In the stationary growth conditions, the anti-DNA antibody as well TdT procedure were capable of detecting fibrillar centers (FCs) and the dense fibrillar component (DFC) in the nucleolus. In FCs, gold particles were revealed on the condensed chromatin inclusions, internal fibrils of decondensed rDNA and the transition zone FC-DFC. Quantitatively, FCs appeared 1,5 times more densely labeled than DFC. NopA100 was localized in FCs and in DFC. In FCs, the most of protein was revealed in the transition zone FC-DFC. After a quantitative study, FCs and the transition zone FC-DFC appeared to contain NopA100 1,7 times more than DFC. Under the conditions of altered gravity, quantitative data clearly showed a redistribution of nucleolar DNA and NopA100 between FCs and DFC in comparison with the control. In

Sub micrometric fibrillar structures of codoped poly aniline obtained by co-oxidation using the NaCl O/ammonium peroxydisulfate system: synthesis and characterization

Energy Technology Data Exchange (ETDEWEB)

Osorio F, J. E.; Gomez Y, C.; Hernandez P, M. A.; Corea T, M. L., E-mail: josorio@ipn.mx [IPN, Escuela Superior de Ingenieria Quimica e Industrias Extractivas, U. P. Adolfo Lopez Mateos, Av. Instituto Politecnico Nacional s/n, Col. San Pedro Zacatenco, 07738 Mexico D. F. (Mexico)

2013-07-01

A mixture of ammonium peroxydisulfate and sodium hypochlorite (NaCl O) (co-oxi dating system) were used to obtain poly aniline (PANi) doped with HCl and camphorsulfonic acid (CsA) (co-doping). The effect of HCl/CsA ratio added during polymerization structure, morphology and electrical conductivity of the conducting polymer was investigated. When NaCl O is used, the polymerization rate is substantially increased and the morphology changes from micrometric granular to nano metric fibrillar. CsA was used as complementary dopant but also to improve the solubility of PANi in common solvents. However, results suggest that quinone-like heterocycles containing carbonyl radicals as well as phenazine-type aromatic rings might be impeding an efficient doping in detriment of the conductivity. For the characterization X-Ray diffraction analysis, UV visible spectroscopy and scanning electron microscopy were used. (Author)

Sub micrometric fibrillar structures of codoped poly aniline obtained by co-oxidation using the NaCl O/ammonium peroxydisulfate system: synthesis and characterization

International Nuclear Information System (INIS)

Osorio F, J. E.; Gomez Y, C.; Hernandez P, M. A.; Corea T, M. L.

2013-01-01

A mixture of ammonium peroxydisulfate and sodium hypochlorite (NaCl O) (co-oxi dating system) were used to obtain poly aniline (PANi) doped with HCl and camphorsulfonic acid (CsA) (co-doping). The effect of HCl/CsA ratio added during polymerization structure, morphology and electrical conductivity of the conducting polymer was investigated. When NaCl O is used, the polymerization rate is substantially increased and the morphology changes from micrometric granular to nano metric fibrillar. CsA was used as complementary dopant but also to improve the solubility of PANi in common solvents. However, results suggest that quinone-like heterocycles containing carbonyl radicals as well as phenazine-type aromatic rings might be impeding an efficient doping in detriment of the conductivity. For the characterization X-Ray diffraction analysis, UV visible spectroscopy and scanning electron microscopy were used. (Author)

The numerical simulation study of hemodynamics of the new dense-mesh stent

Science.gov (United States)

Ma, Jiali; Yuan, Zhishan; Yu, Xuebao; Feng, Zhaowei; Miao, Weidong; Xu, Xueli; Li, Juntao

2017-09-01

The treatment of aortic aneurysm in new dense mesh stent is based on the principle of hemodynamic changes. But the mechanism is not yet very clear. This paper analyzed and calculated the hemodynamic situation before and after the new dense mesh stent implanting by the method of numerical simulation. The results show the dense mesh stent changed and impacted the blood flow in the aortic aneurysm. The changes include significant decrement of blood velocity, pressure and shear forces, while ensuring blood can supply branches, which means the new dense mesh stent's hemodynamic mechanism in the treatment of aortic aneurysm is clearer. It has very important significance in developing new dense mesh stent in order to cure aortic aneurysm.

Influence of heart failure on nucleolar organization and protein expression in human hearts

Energy Technology Data Exchange (ETDEWEB)

Rosello-Lleti, Esther; Rivera, Miguel; Cortes, Raquel [Cardiocirculatory Unit, Research Center, Hospital Universitario La Fe, Valencia (Spain); Azorin, Inmaculada [Experimental Neurology, Research Center, Hospital Universitario La Fe, Valencia (Spain); Sirera, Rafael [Biotechnology Department, Universidad Politecnica, Valencia (Spain); Martinez-Dolz, Luis [Cardiology Unit, Hospital Universitario La Fe, Valencia (Spain); Hove, Leif; Cinca, Juan [Cardiology Unit, Hospital San Pau, Barcelona (Spain); Lago, Francisca; Gonzalez-Juanatey, Jose R. [Cardiology Unit, Institute of Biomedical Research, Hospital Clinicode Santiagode Compostela (Spain); Salvador, Antonio [Experimental Neurology, Research Center, Hospital Universitario La Fe, Valencia (Spain); Portoles, Manuel, E-mail: portoles_man@gva.es [Cell Biology and Pathology Unit, Research Center, Hospital Universitario La Fe, Valencia (Spain)

2012-02-10

Highlights: Black-Right-Pointing-Pointer Heart failure alters nucleolar morphology and organization. Black-Right-Pointing-Pointer Nucleolin expression is significant increased in ischemic and dilated cardiomyopathy. Black-Right-Pointing-Pointer Ventricular function of heart failure patients was related with nucleolin levels. -- Abstract: We investigate for the first time the influence of heart failure (HF) on nucleolar organization and proteins in patients with ischemic (ICM) or dilated cardiomyopathy (DCM). A total of 71 human hearts from ICM (n = 38) and DCM (n = 27) patients, undergoing heart transplantation and control donors (n = 6), were analysed by western-blotting, RT-PCR and cell biology methods. When we compared protein levels according to HF etiology, nucleolin was increased in both ICM (117%, p < 0.05) and DCM (141%, p < 0.01). Moreover, mRNA expression were also upregulated in ICM (1.46-fold, p < 0.05) and DCM (1.70-fold, p < 0.05. Immunofluorescence studies showed that the highest intensity of nucleolin was into nucleolus (p < 0.0001), and it was increased in pathological hearts (p < 0.0001). Ultrastructure analysis by electron microscopy showed an increase in the nucleus and nucleolus size in ICM (17%, p < 0.05 and 131%, p < 0.001) and DCM (56%, p < 0.01 and 69%, p < 0.01). Nucleolar organization was influenced by HF irrespective of etiology, increasing fibrillar centers (p < 0.001), perinucleolar chromatin (p < 0.01) and dense fibrillar components (p < 0.01). Finally, left ventricular function parameters were related with nucleolin levels in ischemic hearts (p < 0.0001). The present study demonstrates that HF influences on morphology and organization of nucleolar components, revealing changes in the expression and in the levels of nucleolin protein.

Warm dense matter and Thomson scattering at FLASH

International Nuclear Information System (INIS)

Faeustlin, Roland Rainer

2010-05-01

X-ray free electron lasers are powerful tools to investigate moderately to strongly correlated solid density low temperature plasmas, named warm dense matter. These plasmas are of most interest for astrophysics and laser plasma interaction, particularly inertial confinement fusion. This work utilizes the ultrashort soft x-ray pulse duration and high brilliance of the free electron laser in Hamburg, FLASH, to generate warm dense matter and to study its ultrafast processes. The techniques applied are absorption measurement, emission spectroscopy and Thomson scattering. Radiative hydrodynamics and Thomson scattering simulations are used to investigate the impact of temperature and density gradients in the sample and to fit the experimental data. The measurements result in a comprehensive picture of soft x-ray matter interaction related to warm dense matter and yield insight into ultrafast equilibration and relaxation mechanisms, in particular impact ionization and radiative recombination. (orig.)

Warm dense matter and Thomson scattering at FLASH

Energy Technology Data Exchange (ETDEWEB)

Faeustlin, Roland Rainer

2010-05-15

X-ray free electron lasers are powerful tools to investigate moderately to strongly correlated solid density low temperature plasmas, named warm dense matter. These plasmas are of most interest for astrophysics and laser plasma interaction, particularly inertial confinement fusion. This work utilizes the ultrashort soft x-ray pulse duration and high brilliance of the free electron laser in Hamburg, FLASH, to generate warm dense matter and to study its ultrafast processes. The techniques applied are absorption measurement, emission spectroscopy and Thomson scattering. Radiative hydrodynamics and Thomson scattering simulations are used to investigate the impact of temperature and density gradients in the sample and to fit the experimental data. The measurements result in a comprehensive picture of soft x-ray matter interaction related to warm dense matter and yield insight into ultrafast equilibration and relaxation mechanisms, in particular impact ionization and radiative recombination. (orig.)

Rheology of dense suspensions of non colloidal particles

OpenAIRE

Guazzelli Élisabeth

2017-01-01

Dense suspensions are materials with broad applications both in industrial processes (e.g. waste disposal, concrete, drilling muds, metalworking chip transport, and food processing) and in natural phenomena (e.g. flows of slurries, debris, and lava). Despite its long research history and its practical relevance, the mechanics of dense suspensions remain poorly understood. The major difficulty is that the grains interact both by hydrodynamic interactions through the liquid and by mechanical co...

Multilevel sparse functional principal component analysis.

Science.gov (United States)

Di, Chongzhi; Crainiceanu, Ciprian M; Jank, Wolfgang S

2014-01-29

We consider analysis of sparsely sampled multilevel functional data, where the basic observational unit is a function and data have a natural hierarchy of basic units. An example is when functions are recorded at multiple visits for each subject. Multilevel functional principal component analysis (MFPCA; Di et al. 2009) was proposed for such data when functions are densely recorded. Here we consider the case when functions are sparsely sampled and may contain only a few observations per function. We exploit the multilevel structure of covariance operators and achieve data reduction by principal component decompositions at both between and within subject levels. We address inherent methodological differences in the sparse sampling context to: 1) estimate the covariance operators; 2) estimate the functional principal component scores; 3) predict the underlying curves. Through simulations the proposed method is able to discover dominating modes of variations and reconstruct underlying curves well even in sparse settings. Our approach is illustrated by two applications, the Sleep Heart Health Study and eBay auctions.

Dense Descriptors for Optical Flow Estimation: A Comparative Study

Directory of Open Access Journals (Sweden)

Ahmadreza Baghaie

2017-02-01

Full Text Available Estimating the displacements of intensity patterns between sequential frames is a very well-studied problem, which is usually referred to as optical flow estimation. The first assumption among many of the methods in the field is the brightness constancy during movements of pixels between frames. This assumption is proven to be not true in general, and therefore, the use of photometric invariant constraints has been studied in the past. One other solution can be sought by use of structural descriptors rather than pixels for estimating the optical flow. Unlike sparse feature detection/description techniques and since the problem of optical flow estimation tries to find a dense flow field, a dense structural representation of individual pixels and their neighbors is computed and then used for matching and optical flow estimation. Here, a comparative study is carried out by extending the framework of SIFT-flow to include more dense descriptors, and comprehensive comparisons are given. Overall, the work can be considered as a baseline for stimulating more interest in the use of dense descriptors for optical flow estimation.

A nutrient-dense, high fiber, fruit-based supplement bar increases HDL, particularly large HDL, lowers homocysteine, and raises glutathione in a 2-week trial

Science.gov (United States)

Dietary intake modulates disease risk, but little is known as to how components within food mixtures affect pathophysiology. Here, a low-calorie, high-fiber, fruit-based nutrient-dense bar of defined composition (e.g., vitamins/minerals, fruit polyphenolics, B-glucan, docosahexaenoic acid (DHA)) app...

Dense Plasma Focus Modeling

Energy Technology Data Exchange (ETDEWEB)

Li, Hui [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Li, Shengtai [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Jungman, Gerard [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Hayes-Sterbenz, Anna Catherine [Los Alamos National Lab. (LANL), Los Alamos, NM (United States)

2016-08-31

The mechanisms for pinch formation in Dense Plasma Focus (DPF) devices, with the generation of high-energy ions beams and subsequent neutron production over a relatively short distance, are not fully understood. Here we report on high-fidelity 2D and 3D numerical magnetohydrodynamic (MHD) simulations using the LA-COMPASS code to study the pinch formation dynamics and its associated instabilities and neutron production.

Holographic Renormalization in Dense Medium

International Nuclear Information System (INIS)

Park, Chanyong

2014-01-01

The holographic renormalization of a charged black brane with or without a dilaton field, whose dual field theory describes a dense medium at finite temperature, is investigated in this paper. In a dense medium, two different thermodynamic descriptions are possible due to an additional conserved charge. These two different thermodynamic ensembles are classified by the asymptotic boundary condition of the bulk gauge field. It is also shown that in the holographic renormalization regularity of all bulk fields can reproduce consistent thermodynamic quantities and that the Bekenstein-Hawking entropy is nothing but the renormalized thermal entropy of the dual field theory. Furthermore, we find that the Reissner-Nordström AdS black brane is dual to a theory with conformal matter as expected, whereas a charged black brane with a nontrivial dilaton profile is mapped to a theory with nonconformal matter although its leading asymptotic geometry still remains as AdS space

Skyrmions, dense matter and nuclear forces

International Nuclear Information System (INIS)

Pethick, C.J.

1984-12-01

A simple introduction to a number of properties of Skyrme's chiral soliton model of baryons is given. Some implications of the model for dense matter and for nuclear interactions are discussed. (orig.)

Hyperons in dense matter

International Nuclear Information System (INIS)

Dapo, Haris

2009-01-01

The hyperon-nucleon YN low momentum effective interaction (V low k ) allows for an extensive study of the behavior of hyperons in dense matter, together with an investigation of effects of the presence of hyperons on dense matter. The first step towards this goal is the construction of the matrix elements for the hyperon-nucleon low momentum potential. In order to assess the different properties of hyperons within these potentials we calculate the hyperon single-particle potentials in the Hartree-Fock approximation for all of the interactions. Their dependence on both momentum and density, is studied. The single-particle potentials are then used to determine the chemical potential of hyperons in neutron stars. For nucleonic properties, the nucleon-nucleon V low k can be used with the caveat that the calculation of the ground-state energy of symmetric nuclear matter does not correctly reproduce the properties of matter at saturation. With the nucleon-nucleon V low k one is unable to reach the densities needed for the calculation of neutron star masses. To circumvent this problem we use two approaches: in the first one, we parametrize the entire nucleonic sector. In the second one, we replace only the three-body force. The former will enable us to study neutron star masses, and the latter for studying the medium's response to the external probe. In this thesis we take the external probe to be the neutrino. By combining this parametrization with the YN V low k potential, we calculate the equation of state of equilibrated matter. Performing the calculation in the Hartree-Fock approximation at zero temperature, the concentrations of all particles are calculated. From these we can ascertain at which densities hyperons appear for a wide range of parameters. Finally, we calculate the masses of neutron stars with these concentrations. For the calculation of the medium's response to an external probe, we replace the three-body force with a density-dependent interaction. This

A study of the native cell wall structures of the marine alga Ventricaria ventricosa (Siphonocladales, Chlorophyceae) using atomic force microscopy.

Science.gov (United States)

Eslick, Enid M; Beilby, Mary J; Moon, Anthony R

2014-04-01

A substantial proportion of the architecture of the plant cell wall remains unknown with a few cell wall models being proposed. Moreover, even less is known about the green algal cell wall. Techniques that allow direct visualization of the cell wall in as near to its native state are of importance in unravelling the spatial arrangement of cell wall structures and hence in the development of cell wall models. Atomic force microscopy (AFM) was used to image the native cell wall of living cells of Ventricaria ventricosa (V. ventricosa) at high resolution under physiological conditions. The cell wall polymers were identified mainly qualitatively via their structural appearance. The cellulose microfibrils (CMFs) were easily recognizable and the imaging results indicate that the V. ventricosa cell wall has a cross-fibrillar structure throughout. We found the native wall to be abundant in matrix polysaccharides existing in different curing states. The soft phase matrix polysaccharides susceptible by the AFM scanning tip existed as a glutinous fibrillar meshwork, possibly incorporating both the pectic- and hemicellulosic-type substances. The hard phase matrix producing clearer images, revealed coiled fibrillar structures associated with CMFs, sometimes being resolved as globular structures by the AFM tip. The coiling fibrillar structures were also seen in the images of isolated cell wall fragments. The mucilaginous component of the wall was discernible from the gelatinous cell wall matrix as it formed microstructural domains over the surface. AFM has been successful in imaging the native cell wall and revealing novel findings such as the 'coiling fibrillar structures' and cell wall components which have previously not been seen, that is, the gelatinous matrix phase.

Dense Crowds of Virtual Humans

NARCIS (Netherlands)

Stüvel, S.A.

2016-01-01

This thesis presents a novel crowd simulation method `Torso Crowds', aimed at the simulation of dense crowds. The method is based on the results of user studies and a motion capture experiment, which are also described in this thesis. Torso Crowds introduces a capsule shape to represent people in

Microablation of collagen-based substrates for soft tissue engineering

International Nuclear Information System (INIS)

Kumar, Vivek A; Caves, Jeffrey M; Naik, Nisarga; Haller, Carolyn A; Chaikof, Elliot L; Martinez, Adam W

2014-01-01

Noting the abundance and importance of collagen as a biomaterial, we have developed a facile method for the production of a dense fibrillar extracellular matrix mimicking collagen–elastin hybrids with tunable mechanical properties. Through the use of excimer-laser technology, we have optimized conditions for the ablation of collagen lamellae without denaturation of protein, maintenance of fibrillar ultrastructure and preservation of native D-periodicity. Strengths of collagen–elastin hybrids ranged from 0.6 to 13 MPa, elongation at break from 9 to 70% and stiffness from 2.9 to 94 MPa, allowing for the design of a wide variety of tissue specific scaffolds. Further, large (centimeter scale) lamellae can be fabricated and embedded with recombinant elastin to generate collagen–elastin hybrids. Exposed collagen in hybrids act as cell adhesive sites for rat mesenchymal stem cells that conform to ablate waveforms. The ability to modulate these features allows for the generation of a class of biopolymers that can architecturally and physiologically replicate native tissue. (communication)

Breast cancer detection using sonography in women with mammographically dense breasts

International Nuclear Information System (INIS)

Okello, Jimmy; Kisembo, Harriet; Bugeza, Sam; Galukande, Moses

2014-01-01

Mammography, the gold standard for breast cancer screening misses some cancers, especially in women with dense breasts. Breast ultrasonography as a supplementary imaging tool for further evaluation of symptomatic women with mammographically dense breasts may improve the detection of mass lesions otherwise missed at mammography. The purpose of this study was to determine the incremental breast cancer detection rate using US scanning in symptomatic women with mammographically dense breasts in a resource poor environment. A cross sectional descriptive study. Women referred for mammography underwent bilateral breast ultrasound, and mammography for symptom evaluation. The lesions seen by both modalities were described using sonographic BI-RADS lexicon and categorized. Ultrasound guided core biopsies were performed. IRB approval was obtained and all participants provided informed written consent. In total 148 women with mammographically dense breasts were recruited over six months. The prevalence of breast cancer in symptomatic women with mammographically dense breasts was 22/148 (15%). Mammography detected 16/22 (73%) of these cases and missed 6/22 (27%). The six breast cancer cases missed were correctly diagnosed on breast ultrasonography. Sonographic features typical of breast malignancy were irregular shape, non-parallel orientation, non circumscribed margin, echogenic halo, and increased lesion vascularity (p values < 0.005). Typical sonofeatures of benign mass lesions were: oval shape, parallel orientation and circumscribed margin (p values <0.005). Breast ultrasound scan as a supplementary imaging tool detected 27% more malignant mass lesions otherwise missed by mammography among these symptomatic women with mammographically dense breasts. We recommend that ultra sound scanning in routine evaluation of symptomatic women with mammographically dense breasts

Interparticle interaction and transport processes in dense semiclassical plasmas

International Nuclear Information System (INIS)

Baimbetov, F.B.; Giniyatova, Sh.G.

2005-01-01

On the basis of the density response formalism an expression for the pseudopotential of dense semiclassical plasma, which takes account of quantum-mechanical effects, local field corrections, and electronic screening effects is obtained. The static structure factors taking into account both local fields and quantum-mechanical effects are calculated. An electrical conductivity, thermal conductivity, and viscosity of dense semiclassical plasma are studied

Dense interstellar cloud chemistry: Basic issues and possible dynamical solution

International Nuclear Information System (INIS)

Prasad, S.S.; Heere, K.R.; Tarafdar, S.P.

1989-01-01

Standing at crossroad of enthusiasm and frustration, dense intertellar cloud chemistry has a squarely posed fundamental problem: Why do the grains appear to play at best a minor role in the chemistry? Grain surface chemistry creates considerable difficulties when the authors treat dense clouds as static objects and ignore the implications of the processes by which the clouds became dense in the first place. A new generation of models which treat chemical and dynamical evolutions concurrently are therefore presented as possible solution to the current frustrations. The proposed modeling philosophy and agenda could make the next decade quite exciting for interstellar chemistry

Dietary intake of energy-dense, nutrient-poor and nutrient-dense food sources in children with cystic fibrosis.

Science.gov (United States)

Sutherland, Rosie; Katz, Tamarah; Liu, Victoria; Quintano, Justine; Brunner, Rebecca; Tong, Chai Wei; Collins, Clare E; Ooi, Chee Y

2018-04-30

Prescription of a high-energy, high-fat diet is a mainstay of nutrition management in cystic fibrosis (CF). However, families may be relying on energy-dense, nutrient-poor (EDNP) foods rather than nutrient-dense (ND) foods to meet dietary targets. We aimed to evaluate the relative contribution of EDNP and ND foods to the usual diets of children with CF and identify sociodemographic factors associated with higher EDNP intakes. This is a cross-sectional comparison of children with CF aged 2-18 years and age- and gender-matched controls. Dietary intake was assessed using the Australian Child and Adolescent Eating Survey (ACAES) food frequency questionnaire. Children with CF (n = 80: 37 males; mean age 9.3 years) consumed significantly more EDNP foods than controls (mean age 9.8 years) in terms of both total energy (median [IQR]: 1301 kcal/day (843-1860) vs. 686 kcal/day (480-1032); p energy intake (median [IQR]: 44% (34-51) vs. 31% (24-43); p energy requirements (median [IQR]: 158% (124-187) vs. 112% (90-137); p energy- and fat-dense CF diet is primarily achieved by overconsumption of EDNP foods, rather than ND sources. This dietary pattern may not be optimal for the future health of children with CF, who are now expected to survive well into adulthood. Copyright © 2018 European Cystic Fibrosis Society. All rights reserved.

PHOTOCHEMICAL HEATING OF DENSE MOLECULAR GAS

Energy Technology Data Exchange (ETDEWEB)

Glassgold, A. E. [Astronomy Department, University of California, Berkeley, CA 94720 (United States); Najita, J. R. [National Optical Astronomy Observatory, 950 North Cherry Avenue, Tucson, AZ 85719 (United States)

2015-09-10

Photochemical heating is analyzed with an emphasis on the heating generated by chemical reactions initiated by the products of photodissociation and photoionization. The immediate products are slowed down by collisions with the ambient gas and then heat the gas. In addition to this direct process, heating is also produced by the subsequent chemical reactions initiated by these products. Some of this chemical heating comes from the kinetic energy of the reaction products and the rest from collisional de-excitation of the product atoms and molecules. In considering dense gas dominated by molecular hydrogen, we find that the chemical heating is sometimes as large, if not much larger than, the direct heating. In very dense gas, the total photochemical heating approaches 10 eV per photodissociation (or photoionization), competitive with other ways of heating molecular gas.

Nucleon structure and properties of dense matter

International Nuclear Information System (INIS)

Kutschera, M.; Pethick, C.J.; Illinois Univ., Urbana, IL

1988-01-01

We consider the properties of dense matter in a framework of the Skyrme soliton model and the chiral bag model. The influence of the nucleon structure on the equation of state of dense matter is emphasized. We find that in both models the energy per unit volume is proportional to n 4/3 , n being the baryon number density. We discuss the properties of neutron stars with a derived equation of state. The role of many-body effects is investigated. The effect of including higher order terms in the chiral lagrangian is examined. The phase transition to quark matter is studied. 29 refs., 6 figs. (author)

Are superluminous supernovae and long GRBs the products of dynamical processes in young dense star clusters?

Energy Technology Data Exchange (ETDEWEB)

Van den Heuvel, E. P. J. [Astronomical Institute Anton Pannekoek, University of Amsterdam, P.O. Box 94249, 1090 GE Amsterdam (Netherlands); Portegies Zwart, S. F. [Leiden Observatory, Leiden University, P.O. Box 9513, 2300 RA Leiden (Netherlands)

2013-12-20

Superluminous supernovae (SLSNe) occur almost exclusively in small galaxies (Small/Large Magellanic Cloud (SMC/LMC)-like or smaller), and the few SLSNe observed in larger star-forming galaxies always occur close to the nuclei of their hosts. Another type of peculiar and highly energetic supernovae are the broad-line Type Ic SNe (SN Ic-BL) that are associated with long-duration gamma-ray bursts (LGRBs). Also these have a strong preference for occurring in small (SMC/LMC-like or smaller) star-forming galaxies, and in these galaxies LGRBs always occur in the brightest spots. Studies of nearby star-forming galaxies that are similar to the hosts of LGRBs show that these brightest spots are giant H II regions produced by massive dense young star clusters with many hundreds of O- and Wolf-Rayet-type stars. Such dense young clusters are also found in abundance within a few hundred parsecs from the nucleus of larger galaxies like our own. We argue that the SLSNe and the SNe Ic-BL/LGRBs are exclusive products of two types of dynamical interactions in dense young star clusters. In our model the high angular momentum of the collapsing stellar cores required for the engines of an SN Ic-BL results from the post-main-sequence mergers of dynamically produced cluster binaries with almost equal-mass components. The merger produces a critically rotating single helium star with sufficient angular momentum to produce an LGRB; the observed 'metal aversion' of LGRBs is a natural consequence of the model. We argue that, on the other hand, SLSNe could be the products of runaway multiple collisions in dense clusters, and we present (and quantize) plausible scenarios of how the different types of SLSNe can be produced.

Dry processing versus dense medium processing for preparing thermal coal

CSIR Research Space (South Africa)

De Korte, GJ

2013-10-01

Full Text Available of the final product. The separation efficiency of dry processes is, however, not nearly as good as that of dense medium and, as a result, it is difficult to effectively beneficiate coals with a high near-dense content. The product yield obtained from some raw...

Efficient Online Aggregates in Dense-Region-Based Data Cube Representations

Science.gov (United States)

Haddadin, Kais; Lauer, Tobias

In-memory OLAP systems require a space-efficient representation of sparse data cubes in order to accommodate large data sets. On the other hand, most efficient online aggregation techniques, such as prefix sums, are built on dense array-based representations. These are often not applicable to real-world data due to the size of the arrays which usually cannot be compressed well, as most sparsity is removed during pre-processing. A possible solution is to identify dense regions in a sparse cube and only represent those using arrays, while storing sparse data separately, e.g. in a spatial index structure. Previous dense-region-based approaches have concentrated mainly on the effectiveness of the dense-region detection (i.e. on the space-efficiency of the result). However, especially in higher-dimensional cubes, data is usually more cluttered, resulting in a potentially large number of small dense regions, which negatively affects query performance on such a structure. In this paper, our focus is not only on space-efficiency but also on time-efficiency, both for the initial dense-region extraction and for queries carried out in the resulting hybrid data structure. We describe two methods to trade available memory for increased aggregate query performance. In addition, optimizations in our approach significantly reduce the time to build the initial data structure compared to former systems. Also, we present a straightforward adaptation of our approach to support multi-core or multi-processor architectures, which can further enhance query performance. Experiments with different real-world data sets show how various parameter settings can be used to adjust the efficiency and effectiveness of our algorithms.

The Green Bank Ammonia Survey: Dense Cores under Pressure in Orion A

Energy Technology Data Exchange (ETDEWEB)

Kirk, Helen; Di Francesco, James [NRC Herzberg Astronomy and Astrophysics, 5071 West Saanich Rd, Victoria, BC, V9E 2E7 (Canada); Friesen, Rachel K. [Dunlap Institute for Astronomy and Astrophysics, University of Toronto, 50 St. George St., Toronto, Ontario M5S 3H4 (Canada); Pineda, Jaime E.; Caselli, Paola; Alves, Felipe O.; Chacón-Tanarro, Ana; Punanova, Anna [Max-Planck-Institut für extraterrestrische Physik, Giessenbachstrasse 1, D-85748, Garching (Germany); Rosolowsky, Erik [Department of Physics, University of Alberta, Edmonton, AB (Canada); Offner, Stella S. R. [Department of Astronomy, University of Massachusetts, Amherst, MA 01003 (United States); Matzner, Christopher D.; Singh, Ayushi [Department of Astronomy and Astrophysics, University of Toronto, 50 St. George St., Toronto, Ontario, M5S 3H4 (Canada); Myers, Philip C.; Chen, How-Huan [Harvard-Smithsonian Center for Astrophysics, 60 Garden St., Cambridge, MA 02138 (United States); Chen, Michael Chun-Yuan; Keown, Jared [Department of Physics and Astronomy, University of Victoria, 3800 Finnerty Rd., Victoria, BC, V8P 5C2 (Canada); Seo, Young Min [Jet Propulsion Laboratory, NASA, 4800 Oak Grove Dr., Pasadena, CA 91109 (United States); Shirley, Yancy [Steward Observatory, 933 North Cherry Ave., Tucson, AZ 85721 (United States); Ginsburg, Adam [National Radio Astronomy Observatory, Socorro, NM 87801 (United States); Hall, Christine [Department of Physics, Engineering Physics and Astronomy, Queen’s University, Kingston, Ontario, K7L 3N6 (Canada); and others

2017-09-10

We use data on gas temperature and velocity dispersion from the Green Bank Ammonia Survey and core masses and sizes from the James Clerk Maxwell Telescope Gould Belt Survey to estimate the virial states of dense cores within the Orion A molecular cloud. Surprisingly, we find that almost none of the dense cores are sufficiently massive to be bound when considering only the balance between self-gravity and the thermal and non-thermal motions present in the dense gas. Including the additional pressure binding imposed by the weight of the ambient molecular cloud material and additional smaller pressure terms, however, suggests that most of the dense cores are pressure-confined.

The Green Bank Ammonia Survey: Dense Cores under Pressure in Orion A

International Nuclear Information System (INIS)

Kirk, Helen; Di Francesco, James; Friesen, Rachel K.; Pineda, Jaime E.; Caselli, Paola; Alves, Felipe O.; Chacón-Tanarro, Ana; Punanova, Anna; Rosolowsky, Erik; Offner, Stella S. R.; Matzner, Christopher D.; Singh, Ayushi; Myers, Philip C.; Chen, How-Huan; Chen, Michael Chun-Yuan; Keown, Jared; Seo, Young Min; Shirley, Yancy; Ginsburg, Adam; Hall, Christine

2017-01-01

We use data on gas temperature and velocity dispersion from the Green Bank Ammonia Survey and core masses and sizes from the James Clerk Maxwell Telescope Gould Belt Survey to estimate the virial states of dense cores within the Orion A molecular cloud. Surprisingly, we find that almost none of the dense cores are sufficiently massive to be bound when considering only the balance between self-gravity and the thermal and non-thermal motions present in the dense gas. Including the additional pressure binding imposed by the weight of the ambient molecular cloud material and additional smaller pressure terms, however, suggests that most of the dense cores are pressure-confined.

Experimental Studies of the Transport Parameters of Warm Dense Matter

Energy Technology Data Exchange (ETDEWEB)

Chouffani, Khalid [Idaho State Univ., Pocatello, ID (United States)

2014-12-01

There is a need to establish fundamental properties of matter and energy under extreme physical conditions. Although high energy density physics (HEDP) research spans a wide range of plasma conditions, there is one unifying regime that is of particular importance and complexity: that of warm dense matter, the transitional state between solid state condensed matter and energetic plasmas. Most laboratory experimental conditions, including inertial confinement implosion, fall into this regime. Because all aspects of laboratory-created high-energy-density plasmas transition through the warm dense matter regime, understanding the fundamental properties to determine how matter and energy interact in this regime is an important aspect of major research efforts in HEDP. Improved understanding of warm dense matter would have significant and wide-ranging impact on HEDP science, from helping to explain wire initiation studies on the Sandia Z machine to increasing the predictive power of inertial confinement fusion modeling. The central goal or objective of our proposed research is to experimentally determine the electrical resistivity, temperature, density, and average ionization state of a variety of materials in the warm dense matter regime, without the use of theoretical calculations. Since the lack of an accurate energy of state (EOS) model is primarily due to the lack of experimental data, we propose an experimental study of the transport coefficients of warm dense matter.

Relating quantum discord with the quantum dense coding capacity

Energy Technology Data Exchange (ETDEWEB)

Wang, Xin; Qiu, Liang, E-mail: lqiu@cumt.edu.cn; Li, Song; Zhang, Chi [China University of Mining and Technology, School of Sciences (China); Ye, Bin [China University of Mining and Technology, School of Information and Electrical Engineering (China)

2015-01-15

We establish the relations between quantum discord and the quantum dense coding capacity in (n + 1)-particle quantum states. A necessary condition for the vanishing discord monogamy score is given. We also find that the loss of quantum dense coding capacity due to decoherence is bounded below by the sum of quantum discord. When these results are restricted to three-particle quantum states, some complementarity relations are obtained.

Relating quantum discord with the quantum dense coding capacity

International Nuclear Information System (INIS)

Wang, Xin; Qiu, Liang; Li, Song; Zhang, Chi; Ye, Bin

2015-01-01

We establish the relations between quantum discord and the quantum dense coding capacity in (n + 1)-particle quantum states. A necessary condition for the vanishing discord monogamy score is given. We also find that the loss of quantum dense coding capacity due to decoherence is bounded below by the sum of quantum discord. When these results are restricted to three-particle quantum states, some complementarity relations are obtained

Evaluation of sound extinction and echo interference in densely aggregated zooplankton

Directory of Open Access Journals (Sweden)

Natalia Gorska

2000-09-01

Full Text Available The investigation of sound extinction and echo interference is important as regards the accurate assessment of the abundance of densely aggregated zooplankton. To study these effects,the analytical model describing sound backscattering by an aggregation of isotropic scatterers (Rytov et al. 1978, Sun & Gimenez 1992 has been extended to the case of densely aggregated elongated zooplankton. The evaluation of the effects in the case of a dense krill aggregation demonstrates that they can be significant and should be taken into account.

Hyperons in dense matter

Energy Technology Data Exchange (ETDEWEB)

Dapo, Haris

2009-01-28

The hyperon-nucleon YN low momentum effective interaction (V{sub low} {sub k}) allows for an extensive study of the behavior of hyperons in dense matter, together with an investigation of effects of the presence of hyperons on dense matter. The first step towards this goal is the construction of the matrix elements for the hyperon-nucleon low momentum potential. In order to assess the different properties of hyperons within these potentials we calculate the hyperon single-particle potentials in the Hartree-Fock approximation for all of the interactions. Their dependence on both momentum and density, is studied. The single-particle potentials are then used to determine the chemical potential of hyperons in neutron stars. For nucleonic properties, the nucleon-nucleon V{sub low} {sub k} can be used with the caveat that the calculation of the ground-state energy of symmetric nuclear matter does not correctly reproduce the properties of matter at saturation. With the nucleon-nucleon V{sub low} {sub k} one is unable to reach the densities needed for the calculation of neutron star masses. To circumvent this problem we use two approaches: in the first one, we parametrize the entire nucleonic sector. In the second one, we replace only the three-body force. The former will enable us to study neutron star masses, and the latter for studying the medium's response to the external probe. In this thesis we take the external probe to be the neutrino. By combining this parametrization with the YN V{sub low} {sub k} potential, we calculate the equation of state of equilibrated matter. Performing the calculation in the Hartree-Fock approximation at zero temperature, the concentrations of all particles are calculated. From these we can ascertain at which densities hyperons appear for a wide range of parameters. Finally, we calculate the masses of neutron stars with these concentrations. For the calculation of the medium's response to an external probe, we replace the three

Memory-Efficient Analysis of Dense Functional Connectomes.

Science.gov (United States)

Loewe, Kristian; Donohue, Sarah E; Schoenfeld, Mircea A; Kruse, Rudolf; Borgelt, Christian

2016-01-01

The functioning of the human brain relies on the interplay and integration of numerous individual units within a complex network. To identify network configurations characteristic of specific cognitive tasks or mental illnesses, functional connectomes can be constructed based on the assessment of synchronous fMRI activity at separate brain sites, and then analyzed using graph-theoretical concepts. In most previous studies, relatively coarse parcellations of the brain were used to define regions as graphical nodes. Such parcellated connectomes are highly dependent on parcellation quality because regional and functional boundaries need to be relatively consistent for the results to be interpretable. In contrast, dense connectomes are not subject to this limitation, since the parcellation inherent to the data is used to define graphical nodes, also allowing for a more detailed spatial mapping of connectivity patterns. However, dense connectomes are associated with considerable computational demands in terms of both time and memory requirements. The memory required to explicitly store dense connectomes in main memory can render their analysis infeasible, especially when considering high-resolution data or analyses across multiple subjects or conditions. Here, we present an object-based matrix representation that achieves a very low memory footprint by computing matrix elements on demand instead of explicitly storing them. In doing so, memory required for a dense connectome is reduced to the amount needed to store the underlying time series data. Based on theoretical considerations and benchmarks, different matrix object implementations and additional programs (based on available Matlab functions and Matlab-based third-party software) are compared with regard to their computational efficiency. The matrix implementation based on on-demand computations has very low memory requirements, thus enabling analyses that would be otherwise infeasible to conduct due to

The CCAAT/enhancer binding protein (C/EBP δ is differently regulated by fibrillar and oligomeric forms of the Alzheimer amyloid-β peptide

Directory of Open Access Journals (Sweden)

Nilsson Lars NG

2011-04-01

Full Text Available Abstract Background The transcription factors CCAAT/enhancer binding proteins (C/EBP α, β and δ have been shown to be expressed in brain and to be involved in regulation of inflammatory genes in concert with nuclear factor κB (NF-κB. In general, C/EBPα is down-regulated, whereas both C/EBPβ and δ are up-regulated in response to inflammatory stimuli. In Alzheimer's disease (AD one of the hallmarks is chronic neuroinflammation mediated by astrocytes and microglial cells, most likely induced by the formation of amyloid-β (Aβ deposits. The inflammatory response in AD has been ascribed both beneficial and detrimental roles. It is therefore important to delineate the inflammatory mediators and signaling pathways affected by Aβ deposits with the aim of defining new therapeutic targets. Methods Here we have investigated the effects of Aβ on expression of C/EBP family members with a focus on C/EBPδ in rat primary astro-microglial cultures and in a transgenic mouse model with high levels of fibrillar Aβ deposits (tg-ArcSwe by western blot analysis. Effects on DNA binding activity were analyzed by electrophoretic mobility shift assay. Cross-talk between C/EBPδ and NF-κB was investigated by analyzing binding to a κB site using a biotin streptavidin-agarose pull-down assay. Results We show that exposure to fibril-enriched, but not oligomer-enriched, preparations of Aβ inhibit up-regulation of C/EBPδ expression in interleukin-1β-activated glial cultures. Furthermore, we observed that, in aged transgenic mice, C/EBPα was significantly down-regulated and C/EBPβ was significantly up-regulated. C/EBPδ, on the other hand, was selectively down-regulated in the forebrain, a part of the brain showing high levels of fibrillar Aβ deposits. In contrast, no difference in expression levels of C/EBPδ between wild type and transgenic mice was detected in the relatively spared hindbrain. Finally, we show that interleukin-1β-induced C/EBPδ DNA

THE JCMT GOULD BELT SURVEY: DENSE CORE CLUSTERS IN ORION A

International Nuclear Information System (INIS)

Lane, J.; Kirk, H.; Johnstone, D.; Mairs, S.; Francesco, J. Di; Sadavoy, S.; Hatchell, J.; Berry, D. S.; Jenness, T.; Hogerheijde, M. R.; Ward-Thompson, D.

2016-01-01

The Orion A molecular cloud is one of the most well-studied nearby star-forming regions, and includes regions of both highly clustered and more dispersed star formation across its full extent. Here, we analyze dense, star-forming cores identified in the 850 and 450 μ m SCUBA-2 maps from the JCMT Gould Belt Legacy Survey. We identify dense cores in a uniform manner across the Orion A cloud and analyze their clustering properties. Using two independent lines of analysis, we find evidence that clusters of dense cores tend to be mass segregated, suggesting that stellar clusters may have some amount of primordial mass segregation already imprinted in them at an early stage. We also demonstrate that the dense core clusters have a tendency to be elongated, perhaps indicating a formation mechanism linked to the filamentary structure within molecular clouds.

THE JCMT GOULD BELT SURVEY: DENSE CORE CLUSTERS IN ORION A

Energy Technology Data Exchange (ETDEWEB)

Lane, J.; Kirk, H.; Johnstone, D.; Mairs, S.; Francesco, J. Di [NRC Herzberg Astronomy and Astrophysics, 5071 West Saanich Road, Victoria, BC, V9E 2E7 (Canada); Sadavoy, S. [Max Planck Institute for Astronomy, Königstuhl 17, D-69117 Heidelberg (Germany); Hatchell, J. [Physics and Astronomy, University of Exeter, Stocker Road, Exeter EX4 4QL (United Kingdom); Berry, D. S. [East Asian Observatory, 660 N. A‘ohōkū Place, University Park, Hilo, Hawaii 96720 (United States); Jenness, T. [Joint Astronomy Centre, 660 N. A‘ohōkū Place, University Park, Hilo, Hawaii 96720 (United States); Hogerheijde, M. R. [Leiden Observatory, Leiden University, P.O. Box 9513, 2300 RA Leiden (Netherlands); Ward-Thompson, D. [Jeremiah Horrocks Institute, University of Central Lancashire, Preston, Lancashire, PR1 2HE (United Kingdom); Collaboration: JCMT Gould Belt Survey Team

2016-12-10

The Orion A molecular cloud is one of the most well-studied nearby star-forming regions, and includes regions of both highly clustered and more dispersed star formation across its full extent. Here, we analyze dense, star-forming cores identified in the 850 and 450 μ m SCUBA-2 maps from the JCMT Gould Belt Legacy Survey. We identify dense cores in a uniform manner across the Orion A cloud and analyze their clustering properties. Using two independent lines of analysis, we find evidence that clusters of dense cores tend to be mass segregated, suggesting that stellar clusters may have some amount of primordial mass segregation already imprinted in them at an early stage. We also demonstrate that the dense core clusters have a tendency to be elongated, perhaps indicating a formation mechanism linked to the filamentary structure within molecular clouds.

The capture of attention by entirely irrelevant pictures of calorie-dense foods.

Science.gov (United States)

Cunningham, Corbin A; Egeth, Howard E

2018-04-01

Inborn preference for palatable energy-dense food is thought to be an evolutionary adaptation. One way this preference manifests itself is through the control of visual attention. In the present study, we investigated how attentional capture is influenced by changes in naturally occurring goal-states, in this case desire for energy-dense foods (typically high fat and/or high sugar). We demonstrate that even when distractors are entirely irrelevant, participants were significantly more distracted by energy-dense foods compared with non-food objects and even low-energy foods. Additionally, we show the lability of these goal-states by having a separate set of participants consume a small amount of calorie-dense food prior to the task. The amount of distraction by the energy-dense food images in this case was significantly reduced and no different than distraction by images of low-energy foods and images of non-food objects. While naturally occurring goal-states can be difficult to ignore, they also are highly flexible.

A quasi-dense matching approach and its calibration application with Internet photos.

Science.gov (United States)

Wan, Yanli; Miao, Zhenjiang; Wu, Q M Jonathan; Wang, Xifu; Tang, Zhen; Wang, Zhifei

2015-03-01

This paper proposes a quasi-dense matching approach to the automatic acquisition of camera parameters, which is required for recovering 3-D information from 2-D images. An affine transformation-based optimization model and a new matching cost function are used to acquire quasi-dense correspondences with high accuracy in each pair of views. These correspondences can be effectively detected and tracked at the sub-pixel level in multiviews with our neighboring view selection strategy. A two-layer iteration algorithm is proposed to optimize 3-D quasi-dense points and camera parameters. In the inner layer, different optimization strategies based on local photometric consistency and a global objective function are employed to optimize the 3-D quasi-dense points and camera parameters, respectively. In the outer layer, quasi-dense correspondences are resampled to guide a new estimation and optimization process of the camera parameters. We demonstrate the effectiveness of our algorithm with several experiments.

Developing Cost-Effective Dense Continuous SDC Barrier Layers for SOFCs

Energy Technology Data Exchange (ETDEWEB)

Nguyen, Hoang Viet P.; Hardy, John S.; Coyle, Christopher A.; LU, Zigui; Stevenson, Jeffry W.

2017-12-04

Significantly improved performance during electrochemical testing of a cell with a dense continuous pulsed laser deposited (PLD) samarium doped ceria (SDC) layer spurred investigations into the fabrication of dense continuous SDC barrier layers by means of cost-effective deposition using screen printing which is amenable to industrial production of SOFCs. Many approaches to improve the SDC density have been explored including the use of powder with reduced particle sizes, inks with increased solids loading, and doping with sintering aids (1). In terms of sintering aids, dopants like Mo or binary systems of Mo+Cu or Fe+Co greatly enhance SDC sinterability. In fact, adding dopants to a screen printed, prefired, porous SDC layer made it possible to achieve a dense continuous barrier layer atop the YSZ electrolyte without sintering above 1200°C. Although the objective of fabricating a dense continuous layer was achieved, additional studies have been initiated to improve the cell performance. Underlying issues with constrained sintering and dopant-enhanced ceria-zirconia solid solubility are also addressed in this paper.

An extended GS method for dense linear systems

Science.gov (United States)

Niki, Hiroshi; Kohno, Toshiyuki; Abe, Kuniyoshi

2009-09-01

Davey and Rosindale [K. Davey, I. Rosindale, An iterative solution scheme for systems of boundary element equations, Internat. J. Numer. Methods Engrg. 37 (1994) 1399-1411] derived the GSOR method, which uses an upper triangular matrix [Omega] in order to solve dense linear systems. By applying functional analysis, the authors presented an expression for the optimum [Omega]. Moreover, Davey and Bounds [K. Davey, S. Bounds, A generalized SOR method for dense linear systems of boundary element equations, SIAM J. Comput. 19 (1998) 953-967] also introduced further interesting results. In this note, we employ a matrix analysis approach to investigate these schemes, and derive theorems that compare these schemes with existing preconditioners for dense linear systems. We show that the convergence rate of the Gauss-Seidel method with preconditioner PG is superior to that of the GSOR method. Moreover, we define some splittings associated with the iterative schemes. Some numerical examples are reported to confirm the theoretical analysis. We show that the EGS method with preconditioner produces an extremely small spectral radius in comparison with the other schemes considered.

Rheology of dense suspensions of non colloidal particles

Science.gov (United States)

Guazzelli, Élisabeth

2017-06-01

Dense suspensions are materials with broad applications both in industrial processes (e.g. waste disposal, concrete, drilling muds, metalworking chip transport, and food processing) and in natural phenomena (e.g. flows of slurries, debris, and lava). Despite its long research history and its practical relevance, the mechanics of dense suspensions remain poorly understood. The major difficulty is that the grains interact both by hydrodynamic interactions through the liquid and by mechanical contact. These systems thus belong to an intermediate regime between pure suspensions and granular flows. We show that we can unify suspension and granular rheology under a common framework by transferring the frictional approach of dry granular media to wet suspensions of spherical particles. We also discuss non-Newtonian behavior such as normal-stress differences and shear-induced migration. Beyond the classical problem of dense suspension of hard spheres which is far from being completely resolved, there are also entirely novel avenues of study concerning more complex mixtures of particles and fluids such as those involving other types of particles (e.g. fibers) or non-Newtonian fluids that we will also address.

The electronic pressure in dense plasmas

International Nuclear Information System (INIS)

Pozwolski, A.E.

1982-01-01

A thermodynamic calculation of the electronic pressure in a dense plasma is given. Approximations involved by the use of the Debye length are avoided, so the above theory remains valid even if the Debye length is smaller than the interionic distance. (author)

Dense Alternating Sign Matrices and Extensions

Czech Academy of Sciences Publication Activity Database

Fiedler, Miroslav; Hall, F.J.; Stroev, M.

2014-01-01

Roč. 444, 1 March (2014), s. 219-226 ISSN 0024-3795 Institutional support: RVO:67985807 Keywords : alternating sign matrix * dense matrix * totally unimodular matrix * combined matrix * generalized complementary basic matrix Subject RIV: BA - General Mathematics Impact factor: 0.939, year: 2014

Dense plasma focus - a literature review

International Nuclear Information System (INIS)

Tendys, J.

1976-01-01

The dense plasma focus (DPF) is a convenient source of short, intense neutron pulses, and dense, high temperature plasma. This review of the literature on the DPF indicates that its operation is still not understood, and attempts to show where the present data is either inadequate or inconsistent. Because the plasma conditions and neutron and x-ray fluxes vary from shot to shot, it is maintained that, to resolve inconsistencies in the present data, spectra need to be measured with energy and time resolution simultaneously, and cannot be built up from a large number of shots. Time resolutions of the order of 1 nsec for pulse lengths of about 100 nsec make these requirements especially difficult. Some theoretical models are presented for the neutron output and its spectrum, but no self-consistent description of the plasma in the focus region is likely for some time. (author)

Scale-chiral symmetry, ω meson, and dense baryonic matter

Science.gov (United States)

Ma, Yong-Liang; Rho, Mannque

2018-05-01

It is shown that explicitly broken scale symmetry is essential for dense skyrmion matter in hidden local symmetry theory. Consistency with the vector manifestation fixed point for the hidden local symmetry of the lowest-lying vector mesons and the dilaton limit fixed point for scale symmetry in dense matter is found to require that the anomalous dimension (|γG2| ) of the gluon field strength tensor squared (G2 ) that represents the quantum trace anomaly should be 1.0 ≲|γG2|≲3.5 . The magnitude of |γG2| estimated here will be useful for studying hadron and nuclear physics based on the scale-chiral effective theory. More significantly, that the dilaton limit fixed point can be arrived at with γG2≠0 at some high density signals that scale symmetry can arise in dense medium as an "emergent" symmetry.

Probing dense matter with strange hadrons

CERN Document Server

Rafelski, Johann; Rafelski, Johann; Letessier, Jean

2002-01-01

Analysis of hadron production experimental data allows to understand the properties of the dense matter fireball produced in relativistic heavy ion collisions. We interpret the analysis results and argue that color deconfined state has been formed at highest CERN-SPS energies and at BNL-RHIC.

Shape distortion and thermo-mechanical properties of dense SOFC components from green tape to sintered body

DEFF Research Database (Denmark)

Teocoli, Francesca; Esposito, Vincenzo; Ni, De Wei

stresses, which develop a camber in the final sintered body. To analyze the phenomena, shrinkage of SOFC components single layers and camber development of bi-layers were measured in-situ by optical dilatometry. In addition, a thoughtful investigation of the viscoelastic properties of individual layers......Sintering of ceramic materials is a critical process, especially when the components are shaped as multilayer. Microstructural changes and stresses take place in ceramics as single layer from the green stage to the densification stage, leading to shape distortion, delamination and cracks...

Validation of in vivo 2D displacements from spiral cine DENSE at 3T.

Science.gov (United States)

Wehner, Gregory J; Suever, Jonathan D; Haggerty, Christopher M; Jing, Linyuan; Powell, David K; Hamlet, Sean M; Grabau, Jonathan D; Mojsejenko, Walter Dimitri; Zhong, Xiaodong; Epstein, Frederick H; Fornwalt, Brandon K

2015-01-30

Displacement Encoding with Stimulated Echoes (DENSE) encodes displacement into the phase of the magnetic resonance signal. Due to the stimulated echo, the signal is inherently low and fades through the cardiac cycle. To compensate, a spiral acquisition has been used at 1.5T. This spiral sequence has not been validated at 3T, where the increased signal would be valuable, but field inhomogeneities may result in measurement errors. We hypothesized that spiral cine DENSE is valid at 3T and tested this hypothesis by measuring displacement errors at both 1.5T and 3T in vivo. Two-dimensional spiral cine DENSE and tagged imaging of the left ventricle were performed on ten healthy subjects at 3T and six healthy subjects at 1.5T. Intersection points were identified on tagged images near end-systole. Displacements from the DENSE images were used to project those points back to their origins. The deviation from a perfect grid was used as a measure of accuracy and quantified as root-mean-squared error. This measure was compared between 3T and 1.5T with the Wilcoxon rank sum test. Inter-observer variability of strains and torsion quantified by DENSE and agreement between DENSE and harmonic phase (HARP) were assessed by Bland-Altman analyses. The signal to noise ratio (SNR) at each cardiac phase was compared between 3T and 1.5T with the Wilcoxon rank sum test. The displacement accuracy of spiral cine DENSE was not different between 3T and 1.5T (1.2 ± 0.3 mm and 1.2 ± 0.4 mm, respectively). Both values were lower than the DENSE pixel spacing of 2.8 mm. There were no substantial differences in inter-observer variability of DENSE or agreement of DENSE and HARP between 3T and 1.5T. Relative to 1.5T, the SNR at 3T was greater by a factor of 1.4 ± 0.3. The spiral cine DENSE acquisition that has been used at 1.5T to measure cardiac displacements can be applied at 3T with equivalent accuracy. The inter-observer variability and agreement of DENSE-derived peak strains and

Nonlinear development of the sausage instability in dense Z-pinches

International Nuclear Information System (INIS)

Colombant, D.; Mosher, D.

1989-01-01

In this paper, a 2d envelope model is described for the nonlinear development of the sausage instability in dense Z-pinches. Numerical solutions for various cases of interest are provided which lay the foundation for a quantitative model of nonthermal neutron emission in dense Z-pinches by determining the induced electric fields associated with the development of the instability

3D full-field quantification of cell-induced large deformations in fibrillar biomaterials by combining non-rigid image registration with label-free second harmonic generation.

Science.gov (United States)

Jorge-Peñas, Alvaro; Bové, Hannelore; Sanen, Kathleen; Vaeyens, Marie-Mo; Steuwe, Christian; Roeffaers, Maarten; Ameloot, Marcel; Van Oosterwyck, Hans

2017-08-01

To advance our current understanding of cell-matrix mechanics and its importance for biomaterials development, advanced three-dimensional (3D) measurement techniques are necessary. Cell-induced deformations of the surrounding matrix are commonly derived from the displacement of embedded fiducial markers, as part of traction force microscopy (TFM) procedures. However, these fluorescent markers may alter the mechanical properties of the matrix or can be taken up by the embedded cells, and therefore influence cellular behavior and fate. In addition, the currently developed methods for calculating cell-induced deformations are generally limited to relatively small deformations, with displacement magnitudes and strains typically of the order of a few microns and less than 10% respectively. Yet, large, complex deformation fields can be expected from cells exerting tractions in fibrillar biomaterials, like collagen. To circumvent these hurdles, we present a technique for the 3D full-field quantification of large cell-generated deformations in collagen, without the need of fiducial markers. We applied non-rigid, Free Form Deformation (FFD)-based image registration to compute full-field displacements induced by MRC-5 human lung fibroblasts in a collagen type I hydrogel by solely relying on second harmonic generation (SHG) from the collagen fibrils. By executing comparative experiments, we show that comparable displacement fields can be derived from both fibrils and fluorescent beads. SHG-based fibril imaging can circumvent all described disadvantages of using fiducial markers. This approach allows measuring 3D full-field deformations under large displacement (of the order of 10 μm) and strain regimes (up to 40%). As such, it holds great promise for the study of large cell-induced deformations as an inherent component of cell-biomaterial interactions and cell-mediated biomaterial remodeling. Copyright © 2017 Elsevier Ltd. All rights reserved.

Primary structure and subcellular localization of two fimbrial subunit-like proteins involved in the biosynthesis of K99 fibrillae.

Science.gov (United States)

Roosendaal, E; Jacobs, A A; Rathman, P; Sondermeyer, C; Stegehuis, F; Oudega, B; de Graaf, F K

1987-09-01

Analysis of the nucleotide sequence of the distal part of the fan gene cluster encoding the proteins involved in the biosynthesis of the fibrillar adhesin, K99, revealed the presence of two structural genes, fanG and fanH. The amino acid sequence of the gene products (FanG and FanH) showed significant homology to the amino acid sequence of the fibrillar subunit protein (FanC). Introduction of a site-specific frameshift mutation in fanG or fanH resulted in a simultaneous decrease in fibrillae production and adhesive capacity. Analysis of subcellular fractions showed that, in contrast to the K99 fibrillar subunit (FanC), both the FanH and the FanG protein were loosely associated with the outer membrane, possibly on the periplasmic side, but were not components of the fimbriae themselves.

Matching of dense plasma focus devices with fission reactors

International Nuclear Information System (INIS)

Harms, A.A.; Heindler, M.

1978-01-01

The potential role of dense plasma focus devices as compact neutron sources for fissile fuel breeding in conjunction with existing fission reactors is considered. It is found that advanced plasma focus devices can be used effectively in conjunction with neutronically efficient fission reactors to constitute ''self-sufficient'' breeders. Correlations among the various parameters such as the power output and conversion ratio of the fission reactor with the neutron yield and capacitor bank energy of the dense plasma focus device are presented and discussed

Collective dynamics in dense Hg vapour

International Nuclear Information System (INIS)

Ishikawa, D; Inui, M; Matsuda, K; Tamura, K; Baron, A Q R; Tsutsui, S; Tanaka, Y; Ishikawa, T

2004-01-01

The dynamic structure factor, S(Q,ο), of dense Hg vapour has been measured by high resolution inelastic x-ray scattering for densities of 3.0, 2.1 and 1.0 g cm -3 corresponding to 0.52, 0.36 and 0.17 times the critical density, respectively, and for momentum transfers between 2.0 and 48 nm -1 . Analysis of the longitudinal current-current correlation function in the framework of generalized hydrodynamics reveals that the frequencies of the collective excitations increase faster with Q than estimated from the macroscopic speed of sound. The ratios of the frequencies were found to be 1.27 at 3.0 g cm -3 , 1.12 at 2.1 g cm -3 and 1.10 at 1.0 g cm -3 . The sound velocity obtained from the present experiments is well reproduced by a wavenumber dependent adiabatic sound velocity, which means that the collective modes remain in the spectra of dense Hg vapour. (letter to the editor)

The Role of Isospin Components of the Scalar σ-Meson in the Structure of Neutron Stars

International Nuclear Information System (INIS)

Vasconcellos, Cesan A.Z.; Luetz, Eduardo; Razeira, Moises; Bodmann, Bardo E. J.; Dillig, Manfred

2004-01-01

Based on non-crossed, crossed and correlated ππ exchanges with irreducible N,Δ intermediate states, we predict an isovector component for the δ meson. We study dense hadronic matter in a generalized relativistic mean field approach with nonlinear self-couplings of the I = 0, 1 components of the scalar field and compare its predictions for neutron star properties with results from different models found in the literature

The structure of protostellar dense cores: a millimeter continuum study

International Nuclear Information System (INIS)

Motte, Frederique

1998-01-01

A comprehensive theoretical scenario explains low-mass star formation and describes the gravitational collapse of an isolated 'ideal' dense core. The major aim of this thesis is to check the standard model predictions on the structure of protostellar dense cores (or envelopes). The earliest stages of star formation remain poorly known because the protostars are still deeply embedded in massive, opaque circumstellar cocoons. On the one hand, sensitive bolometer arrays very recently allow us to measure the millimeter continuum emission arising from dense cores. Such observations are a powerful tool to constrain the density structure of proto-stellar dense cores (on large length scale). In particular, we studied the structure of isolated proto-stellar envelopes in Taurus and protostars in the ρ Ophiuchi cluster. In order to accurately derive their envelope density power law, we simulated the observation of several envelope models. Then we show that most of the Taurus protostars present a density structure consistent with the standard model predictions. In contrast, dense cores in ρ Ophiuchi main cloud are highly fragmented and protostellar envelope have finite size. Moreover fragmentation appears to be essential in determining the final stellar mass of ρ Oph forming stars. In clusters, fragmentation may thus be at the origin of the stellar initial mass function (IMF). On the other hand, our interferometric millimeter continuum observations are tracing (with higher angular resolution) the inner part of protostellar envelopes. Our study show that disks during protostellar stages are not yet massive and thus do not perturb the analysis of envelope density structure. (author) [fr

Probing warm dense lithium by inelastic X-ray scattering

Energy Technology Data Exchange (ETDEWEB)

Garcia Saiz, E; Riley, D [School of Mathematics and Physics, Queen' s University of Belfast, Belfast (United Kingdom); Gregori, G [Clarendon Laboratory, University of Oxford, Parks Road, Oxford (United Kingdom); Gregori, G; Clarke, R J; Neely, D; Notley, M M; Spindloe, C [Central Laser Facility, Rutherford Appleton Laboratory, Chilton, Didcot, OX (United Kingdom); Gericke, D O; Vorberger, J; Wunsch, K [Centre for Fusion, Space and Astrophysics, Department of Physics, University of Warwick, Coventry (United Kingdom); Barbrel, B; Koenig, M [Laboratoire pour l' Utilisation des Laser Intenses, Ecole Polytechnique - Universite Paris-6, 91 - Palaiseau (France); Freeman, R R; Weber, R L; Van Woerkom, L [Department of Physics, The Ohio State University, Columbus, Ohio (United States); Glenzer, S H; Landen, O L; Neumayer, P; Price, D [Lawrence Livermore National Laboratory, Livermore, California (United States); Khattak, F Y [Department of Physics, Kohat University of Science and Technology, Kohat-26000, NWFP (Pakistan); Pelka, A; Roth, M; Schollmeier, M [Institut fur Kernphysik, Technische Universitat Darmstadt (Germany)

2008-10-15

One of the grand challenges of contemporary physics is understanding strongly interacting quantum systems comprising such diverse examples as ultracold atoms in traps, electrons in high-temperature superconductors and nuclear matter. Warm dense matter, defined by temperatures of a few electron volts and densities comparable with solids, is a complex state of such interacting matter. Moreover, the study of warm dense matter states has practical applications for controlled thermonuclear fusion, where it is encountered during the implosion phase, and it also represents laboratory analogues of astrophysical environments found in the core of planets and the crusts of old stars. Here we demonstrate how warm dense matter states can be diagnosed and structural properties can be obtained by inelastic X-ray scattering measurements on a compressed lithium sample. Combining experiments and ab initio simulations enables us to determine its microscopic state and to evaluate more approximate theoretical models for the ionic structure. (authors)

Methodology to estimate variations in solar radiation reaching densely forested slopes in mountainous terrain.

Science.gov (United States)

Sypka, Przemysław; Starzak, Rafał; Owsiak, Krzysztof

2016-12-01

Solar radiation reaching densely forested slopes is one of the main factors influencing the water balance between the atmosphere, tree stands and the soil. It also has a major impact on site productivity, spatial arrangement of vegetation structure as well as forest succession. This paper presents a methodology to estimate variations in solar radiation reaching tree stands in a small mountain valley. Measurements taken in three inter-forest meadows unambiguously showed the relationship between the amount of solar insolation and the shading effect caused mainly by the contour of surrounding tree stands. Therefore, appropriate knowledge of elevation, aspect and tilt angles of the analysed planes had to be taken into consideration during modelling. At critical times, especially in winter, the diffuse and reflected components of solar radiation only reached some of the sites studied as the beam component of solar radiation was totally blocked by the densely forested mountain slopes in the neighbourhood. The cross-section contours and elevation angles of all obstructions are estimated from a digital surface model including both digital elevation model and the height of tree stands. All the parameters in a simplified, empirical model of the solar insolation reaching a given horizontal surface within the research valley are dependent on the sky view factor (SVF). The presented simplified, empirical model and its parameterisation scheme should be easily adaptable to different complex terrains or mountain valleys characterised by diverse geometry or spatial orientation. The model was developed and validated (R 2  = 0.92 , σ = 0.54) based on measurements taken at research sites located in the Silesian Beskid Mountain Range. A thorough understanding of the factors determining the amount of solar radiation reaching woodlands ought to considerably expand the knowledge of the water exchange balance within forest complexes as well as the estimation of site

Studying dense plasmas with coherent XUV pulses

International Nuclear Information System (INIS)

Stabile, H.

2006-12-01

The investigation of dense plasma dynamic requires the development of diagnostics able to ensure the measurement of electronic density with micro-metric space resolution and sub-nanosecond, or even subpicosecond, time resolution (indeed this must be at least comparable with the characteristic tune scale of plasma evolution). In contrast with low-density plasmas, dense plasmas cannot be studied using optical probes in the visible domain, the density range accessible being limited to the critical density (N c equals 1.1*10 21 λ -2 (μm) ∼ 10 21 cm -3 for infrared). In addition, light is reflected even at smaller densities if the medium exhibits sharp density gradients. Hence probing of dense plasmas, for instance those produced by laser irradiation of solids, requires using shorter wavelength radiation. Thanks to their physical properties, high order harmonics generated in rare gases are particularly adapted to the study of dense plasmas. Indeed, they can naturally be synchronized with the generating laser and their pulse duration is very short, which makes it possible to use them in pump-probe experiments. Moreover, they exhibit good spatial and temporal coherencies. Two types of diagnostics were developed during this thesis. The first one was used to study the instantaneous creation of hot-solid-density plasma generated by focusing a femtosecond high-contrast laser on an ultra-thin foil (100 nm) in the 10 18 W/cm 2 intensity regime. The use of high order harmonics, providing a probe beam of sufficiently short wavelengths to penetrate such a medium, enables the study of its dynamics on the 100 fs time scale. The second one uses the harmonics beam as probe beam (λ equals 32 nm) within an interferometric device. This diagnostic was designed to ensure a micro-metric spatial resolution and a temporal resolution in the femtosecond range. The first results in presence of plasma created by irradiation of an aluminum target underline the potentialities of this new

Memory-efficient analysis of dense functional connectomes

Directory of Open Access Journals (Sweden)

Kristian Loewe

2016-11-01

Full Text Available The functioning of the human brain relies on the interplay and integration of numerous individual units within a complex network. To identify network configurations characteristic of specific cognitive tasks or mental illnesses, functional connectomes can be constructed based on the assessment of synchronous fMRI activity at separate brain sites, and then analyzed using graph-theoretical concepts. In most previous studies, relatively coarse parcellations of the brain were used to define regions as graphical nodes. Such parcellated connectomes are highly dependent on parcellation quality because regional and functional boundaries need to be relatively consistent for the results to be interpretable. In contrast, dense connectomes are not subject to this limitation, since the parcellation inherent to the data is used to define graphical nodes, also allowing for a more detailed spatial mapping of connectivity patterns. However, dense connectomes are associated with considerable computational demands in terms of both time and memory requirements. The memory required to explicitly store dense connectomes in main memory can render their analysis infeasible, especially when considering high-resolution data or analyses across multiple subjects or conditions. Here, we present an object-based matrix representation that achieves a very low memory footprint by computing matrix elements on demand instead of explicitly storing them. In doing so, memory required for a dense connectome is reduced to the amount needed to store the underlying time series data. Based on theoretical considerations and benchmarks, different matrix object implementations and additional programs (based on available Matlab functions and Matlab-based third-party software are compared with regard to their computational efficiency in terms of memory requirements and computation time. The matrix implementation based on on-demand computations has very low memory requirements thus enabling

Rheology of dense suspensions of non colloidal particles

Directory of Open Access Journals (Sweden)

Guazzelli Élisabeth

2017-01-01

Full Text Available Dense suspensions are materials with broad applications both in industrial processes (e.g. waste disposal, concrete, drilling muds, metalworking chip transport, and food processing and in natural phenomena (e.g. flows of slurries, debris, and lava. Despite its long research history and its practical relevance, the mechanics of dense suspensions remain poorly understood. The major difficulty is that the grains interact both by hydrodynamic interactions through the liquid and by mechanical contact. These systems thus belong to an intermediate regime between pure suspensions and granular flows. We show that we can unify suspension and granular rheology under a common framework by transferring the frictional approach of dry granular media to wet suspensions of spherical particles. We also discuss non-Newtonian behavior such as normal-stress differences and shear-induced migration. Beyond the classical problem of dense suspension of hard spheres which is far from being completely resolved, there are also entirely novel avenues of study concerning more complex mixtures of particles and fluids such as those involving other types of particles (e.g. fibers or non-Newtonian fluids that we will also address.

Isotopologues of dense gas tracers in NGC 1068

Energy Technology Data Exchange (ETDEWEB)

Wang, Junzhi; Qiu, Jianjie [Shanghai Astronomical Observatory, Chinese Academy of Sciences, 80 Nandan Road, 200030, Shanghai (China); Zhang, Zhi-Yu [Institute for Astronomy, University of Edinburgh, Royal Observatory, Blackford Hill, Edinburgh EH9 3HJ (United Kingdom); Shi, Yong [School of Astronomy and Space Science, Nanjing University, Nanjing, 210093 (China); Zhang, Jiangshui [Center For Astrophysics, GuangZhou University, 510006, GuangZhou (China); Fang, Min, E-mail: jzwang@shao.ac.cn [ESO, Karl Schwarzschild Strasse 2, D-85748 Garching bei Munich (Germany)

2014-11-20

We present observations of isotopic lines of dense gas tracers toward the nuclear region of nearby Seyfert 2 galaxy NGC 1068 with the IRAM 30 m telescope and the Atacama Pathfinder Experiment (APEX) 12 m telescope. We detected four isotopic lines (H{sup 13}CN 1-0, H{sup 13}CO{sup +} 1-0, HN{sup 13}C 1-0, and HC{sup 18}O{sup +} 1-0) at the 3 mm band with the IRAM 30 m telescope and obtained upper limits of other lines. We calculated optical depths of dense gas tracers with the detected isotopic lines of HCN 1-0, HCO{sup +} 1-0, and HNC 1-0. We find that the {sup 14}N/{sup 15}N abundance ratio is greater than 420 if we adopt the upper limit of HC{sup 15}N(1-0) emission. Combining this with fluxes of 1-0 lines from IRAM 30 m observations and the upper limit of 3-2 lines from APEX 12 m observations, we also estimated the excitation condition of molecular gas in the nuclear region of NGC 1068, which is less dense than that in the extreme starburst regions of galaxies.

Dense high temperature ceramic oxide superconductors

Science.gov (United States)

Landingham, Richard L.

1993-01-01

Dense superconducting ceramic oxide articles of manufacture and methods for producing these articles are described. Generally these articles are produced by first processing these superconducting oxides by ceramic processing techniques to optimize materials properties, followed by reestablishing the superconducting state in a desired portion of the ceramic oxide composite.

Dense Plasma Focus: A question in search of answers, a technology in search of applications

International Nuclear Information System (INIS)

Auluck, S.K.H.

2014-01-01

Diagnostic information accumulated over four decades of research suggests a directionality of toroidal motion for energetic ions responsible for fusion neutron production in the Dense Plasma Focus (DPF) and existence of an axial component of magnetic field even under conditions of azimuthal symmetry. This is at variance with the traditional view of Dense Plasma Focus as a purely irrotational compressive flow. The difficulty in understanding the experimental situation from a theoretical standpoint arises from polarity of the observed solenoidal state: three independent experiments confirm existence of a fixed polarity of the axial magnetic field or related azimuthal current. Since the equations governing plasma dynamics do not have a built-in direction, the fixed polarity must be related with initial conditions: the plasma dynamics must interact with an external physical vector in order to generate a solenoidal state of fixed polarity. Only four such external physical vectors can be identified: the earth's magnetic field, earth's angular momentum, direction of current flow and the direction of the plasma accelerator. How interaction of plasma dynamics with these fields can generate observed solenoidal state is a question still in search of answers; this paper outlines one possible answer. The importance of this question goes beyond scientific curiosity into technological uses of the energetic ions and the high-power-density plasma environment. However, commercial utilization of such technologies faces reliability concerns, which can be met only by first-principles integrated design of globally-optimized industrial-quality DPF hardware. Issues involved in the emergence of the Dense Plasma Focus as a technology platform for commercial applications in the not-too-distant future are discussed. (author)

Highly Dense Isolated Metal Atom Catalytic Sites

DEFF Research Database (Denmark)

Chen, Yaxin; Kasama, Takeshi; Huang, Zhiwei

2015-01-01

-ray diffraction. A combination of electron microscopy images with X-ray absorption spectra demonstrated that the silver atoms were anchored on five-fold oxygen-terminated cavities on the surface of the support to form highly dense isolated metal active sites, leading to excellent reactivity in catalytic oxidation......Atomically dispersed noble-metal catalysts with highly dense active sites are promising materials with which to maximise metal efficiency and to enhance catalytic performance; however, their fabrication remains challenging because metal atoms are prone to sintering, especially at a high metal...... loading. A dynamic process of formation of isolated metal atom catalytic sites on the surface of the support, which was achieved starting from silver nanoparticles by using a thermal surface-mediated diffusion method, was observed directly by using in situ electron microscopy and in situ synchrotron X...

Pion condensation in cold dense matter and neutron stars

International Nuclear Information System (INIS)

Haensel, P.; Proszynski, M.

1982-01-01

We study possible influence, on the neutron star structure, of a pion condensation occurring in cold dense matter. Several equations of state with pion-condensed phase are considered. The models of neutron stars are calculated and confronted with existing observational data on pulsars. Such a confrontation appears to rule out the models of dense matter with an abnormal self-bound state, and therefore it seems to exclude the possibility of the existence of abnormal superheavy neutron nuclei and abnormal neutron stars with a liquid pion-condensed surface

Some Recent Progress on Quark Pairings in Dense Quark and Nuclear Matter

International Nuclear Information System (INIS)

Pang Jinyi; Wang Jincheng; Wang Qun

2012-01-01

In this review article we give a brief overview on some recent progress in quark pairings in dense quark/nuclear matter mostly developed in the past five years. We focus on following aspects in particular: the BCS-BEC crossover in the CSC phase, the baryon formation and dissociation in dense quark/nuclear matter, the Ginzburg-Landau theory for three-flavor dense matter with U A (1) anomaly, and the collective and Nambu-Goldstone modes for the spin-one CSC. (physics of elementary particles and fields)

Multiple nodules on the sole of the foot

Directory of Open Access Journals (Sweden)

Alyssa J Miceli

2015-01-01

Full Text Available Ledderhose disease, or plantar fibromatosis, is a benign hyperproliferative disorder of the plantar aponeurosis. It presents as one or more round, firm slow-growing plaques or nodules on the plantar surface of the foot, typically on the medial side. The etiology is unknown, though it has been associated with trauma, liver disease, diabetes mellitus, epilepsy and alcoholism. Histopathological examination of plantar fibromatosis reveals dense fibrocellular tissue with parallel and nodular arrays of fibrocytes and fibrillar collagen with a distinctive cork-screw morphology. The differential diagnosis includes various fibroblastic and myofibroblastic proliferations.

Performance optimization of Sparse Matrix-Vector Multiplication for multi-component PDE-based applications using GPUs

KAUST Repository

Abdelfattah, Ahmad

2016-05-23

Simulations of many multi-component PDE-based applications, such as petroleum reservoirs or reacting flows, are dominated by the solution, on each time step and within each Newton step, of large sparse linear systems. The standard solver is a preconditioned Krylov method. Along with application of the preconditioner, memory-bound Sparse Matrix-Vector Multiplication (SpMV) is the most time-consuming operation in such solvers. Multi-species models produce Jacobians with a dense block structure, where the block size can be as large as a few dozen. Failing to exploit this dense block structure vastly underutilizes hardware capable of delivering high performance on dense BLAS operations. This paper presents a GPU-accelerated SpMV kernel for block-sparse matrices. Dense matrix-vector multiplications within the sparse-block structure leverage optimization techniques from the KBLAS library, a high performance library for dense BLAS kernels. The design ideas of KBLAS can be applied to block-sparse matrices. Furthermore, a technique is proposed to balance the workload among thread blocks when there are large variations in the lengths of nonzero rows. Multi-GPU performance is highlighted. The proposed SpMV kernel outperforms existing state-of-the-art implementations using matrices with real structures from different applications. Copyright © 2016 John Wiley & Sons, Ltd. Copyright © 2016 John Wiley & Sons, Ltd.

Performance optimization of Sparse Matrix-Vector Multiplication for multi-component PDE-based applications using GPUs

KAUST Repository

Abdelfattah, Ahmad; Ltaief, Hatem; Keyes, David E.; Dongarra, Jack

2016-01-01

Simulations of many multi-component PDE-based applications, such as petroleum reservoirs or reacting flows, are dominated by the solution, on each time step and within each Newton step, of large sparse linear systems. The standard solver is a preconditioned Krylov method. Along with application of the preconditioner, memory-bound Sparse Matrix-Vector Multiplication (SpMV) is the most time-consuming operation in such solvers. Multi-species models produce Jacobians with a dense block structure, where the block size can be as large as a few dozen. Failing to exploit this dense block structure vastly underutilizes hardware capable of delivering high performance on dense BLAS operations. This paper presents a GPU-accelerated SpMV kernel for block-sparse matrices. Dense matrix-vector multiplications within the sparse-block structure leverage optimization techniques from the KBLAS library, a high performance library for dense BLAS kernels. The design ideas of KBLAS can be applied to block-sparse matrices. Furthermore, a technique is proposed to balance the workload among thread blocks when there are large variations in the lengths of nonzero rows. Multi-GPU performance is highlighted. The proposed SpMV kernel outperforms existing state-of-the-art implementations using matrices with real structures from different applications. Copyright © 2016 John Wiley & Sons, Ltd. Copyright © 2016 John Wiley & Sons, Ltd.

Rainbow Particle Imaging Velocimetry for Dense 3D Fluid Velocity Imaging

KAUST Repository

Xiong, Jinhui

2017-04-11

Despite significant recent progress, dense, time-resolved imaging of complex, non-stationary 3D flow velocities remains an elusive goal. In this work we tackle this problem by extending an established 2D method, Particle Imaging Velocimetry, to three dimensions by encoding depth into color. The encoding is achieved by illuminating the flow volume with a continuum of light planes (a “rainbow”), such that each depth corresponds to a specific wavelength of light. A diffractive component in the camera optics ensures that all planes are in focus simultaneously. For reconstruction, we derive an image formation model for recovering stationary 3D particle positions. 3D velocity estimation is achieved with a variant of 3D optical flow that accounts for both physical constraints as well as the rainbow image formation model. We evaluate our method with both simulations and an experimental prototype setup.

Kinetic theory of the interdiffusion coefficient in dense plasmas

International Nuclear Information System (INIS)

Boercker, D.B.

1986-08-01

Naive applications of Spitzer's theory to very dense plasmas can lead to negative diffusion coefficients. The interdiffusion coefficients in Binary Ionic Mixtures (two species of point ions in a uniform neutralizing background) have been calculated recently using molecular dynamics techniques. These calculations can provide useful benchmarks for theoretical evaluations of the diffusion coefficient in dense plasma mixtures. This paper gives a brief description of a kinetic theoretic approximation to the diffusion coefficient which generalizes Spitzer to high density and is in excellent agreement with the computer simulations. 15 refs., 1 fig., 2 tabs

High core count single-mode multicore fiber for dense space division multiplexing

DEFF Research Database (Denmark)

Aikawa, K.; Sasaki, Y.; Amma, Y.

2016-01-01

Multicore fibers and few-mode fibers have the potential to realize dense-space-division multiplexing systems. Several dense-space-division multiplexing system transmission experiments over multicore fibers and few-mode fibers have been demonstrated so far. Multicore fibers, including recent resul...

A long-term assessment of the variability in winter use of dense conifer cover by female white-tailed deer.

Directory of Open Access Journals (Sweden)

Glenn D Delgiudice

-time plots of GPS data (24 hr allowed us to explore individual diurnal and seasonal patterns of habitat use relative to changes in snow depth. There was significant among-animal variability in their propensity to be found in three density classes of conifer cover and other open types, but little difference between diurnal and nocturnal patterns of habitat use.Consistent with our findings reported elsewhere that snow depth has a greater impact on deer survival than ambient temperature, herein our population-level results highlight the importance of dense conifer cover as snow shelter rather than thermal cover. Collectively, our findings suggest that maximizing availability of dense conifer cover in an energetically beneficial arrangement with quality feeding sites should be a prominent component of habitat management for deer.

Quantum-Mechanical Calculation of Ionization-Potential Lowering in Dense Plasmas

Directory of Open Access Journals (Sweden)

Sang-Kil Son (손상길

2014-07-01

Full Text Available The charged environment within a dense plasma leads to the phenomenon of ionization-potential depression (IPD for ions embedded in the plasma. Accurate predictions of the IPD effect are of crucial importance for modeling atomic processes occurring within dense plasmas. Several theoretical models have been developed to describe the IPD effect, with frequently discrepant predictions. Only recently, first experiments on IPD in Al plasma have been performed with an x-ray free-electron laser, where their results were found to be in disagreement with the widely used IPD model by Stewart and Pyatt. Another experiment on Al, at the Orion laser, showed disagreement with the model by Ecker and Kröll. This controversy shows a strong need for a rigorous and consistent theoretical approach to calculate the IPD effect. Here, we propose such an approach: a two-step Hartree-Fock-Slater model. With this parameter-free model, we can accurately and efficiently describe the experimental Al data and validate the accuracy of standard IPD models. Our model can be a useful tool for calculating atomic properties within dense plasmas with wide-ranging applications to studies on warm dense matter, shock experiments, planetary science, inertial confinement fusion, and nonequilibrium plasmas created with x-ray free-electron lasers.

Common intersection points in dense fluids via equations of state

International Nuclear Information System (INIS)

Parsafar, G. A.; Noorian, R.

2001-01-01

Some new of state which are derived for dense fluids in recent years, namely the linear isotherm regularity, the dense system equation of state, Ihm-Song-Mason equation of state, and a newly derived semi-empirical equation of state have used to investigate the common intersection point of isobaric expansivity (α p ) in dense fluids. We have shown that the accuracy of these equations of state in predicting such a common intersection point is reduced from the new semi-imperial equation of state, dense system equation of state, linear isotherm regularity, to Ihm-Song-Mason equation of state. respectively. Form physical point of view, the van der Waals equation of state is used to investigate such an intersection point. It is shown that the van der Waals repulsion forces and temperature dependency of the effective molecular diameter are important for existence of this common point. Finally, we have shown that the common intersection points of the isotherms of thermal pressure coefficient, the isotherms of heat capacity at constant volume, and the iso chores of internal pressure for a fluid are related to each other. Also, the common intersection points of the reduced bulk modulus and 1/(Tα p ) for isotherms of a fluid both appear at the same density

Nonlinear electrostatic excitations in magnetized dense plasmas with nonrelativistic and ultra-relativistic degenerate electrons

International Nuclear Information System (INIS)

Mahmood, S.; Sadiq, Safeer; Haque, Q.

2013-01-01

Linear and nonlinear electrostatic waves in magnetized dense electron-ion plasmas are studied with nonrelativistic and ultra-relativistic degenerate and singly, doubly charged helium (He + , He ++ ) and hydrogen (H + ) ions, respectively. The dispersion relation of electrostatic waves in magnetized dense plasmas is obtained under both the energy limits of degenerate electrons. Using reductive perturbation method, the Zakharov-Kuznetsov equation for nonlinear propagation of electrostatic solitons in magnetized dense plasmas is derived for both nonrelativistic and ultra-relativistic degenerate electrons. It is found that variations in plasma density, magnetic field intensity, different mass, and charge number of ions play significant role in the formation of electrostatic solitons in magnetized dense plasmas. The numerical plots are also presented for illustration using the parameters of dense astrophysical plasma situations such as white dwarfs and neutron stars exist in the literature. The present investigation is important for understanding the electrostatic waves propagation in the outer periphery of compact stars which mostly consists of hydrogen and helium ions with degenerate electrons in dense magnetized plasmas

Formation and fragmentation of protostellar dense cores

International Nuclear Information System (INIS)

Maury, Anaelle

2009-01-01

Stars form in molecular clouds, when they collapse and fragment to produce protostellar dense cores. These dense cores are then likely to contract under their own gravity, and form young protostars, that further evolve while accreting their circumstellar mass, until they reach the main sequence. The main goal of this thesis was to study the formation and fragmentation of protostellar dense cores. To do so, two main studies, described in this manuscript, were carried out. First, we studied the formation of protostellar cores by quantifying the impact of protostellar outflows on clustered star formation. We carried out a study of the protostellar outflows powered by the young stellar objects currently formed in the NGc 2264-C proto-cluster, and we show that protostellar outflows seem to play a crucial role as turbulence progenitors in clustered star forming regions, although they seem unlikely to significantly modify the global infall processes at work on clump scales. Second, we investigated the formation of multiple systems by core fragmentation, by using high - resolution observations that allow to probe the multiplicity of young protostars on small scales. Our results suggest that the multiplicity rate of protostars on small scales increase while they evolve, and thus favor dynamical scenarios for the formation of multiple systems. Moreover, our results favor magnetized scenarios of core collapse to explain the small-scale properties of protostars at the earliest stages. (author) [fr

New dynamic silicon photonic components enabled by MEMS technology

Science.gov (United States)

Errando-Herranz, Carlos; Edinger, Pierre; Colangelo, Marco; Björk, Joel; Ahmed, Samy; Stemme, Göran; Niklaus, Frank; Gylfason, Kristinn B.

2018-02-01

Silicon photonics is the study and application of integrated optical systems which use silicon as an optical medium, usually by confining light in optical waveguides etched into the surface of silicon-on-insulator (SOI) wafers. The term microelectromechanical systems (MEMS) refers to the technology of mechanics on the microscale actuated by electrostatic actuators. Due to the low power requirements of electrostatic actuation, MEMS components are very power efficient, making them well suited for dense integration and mobile operation. MEMS components are conventionally also implemented in silicon, and MEMS sensors such as accelerometers, gyros, and microphones are now standard in every smartphone. By combining these two successful technologies, new active photonic components with extremely low power consumption can be made. We discuss our recent experimental work on tunable filters, tunable fiber-to-chip couplers, and dynamic waveguide dispersion tuning, enabled by the marriage of silicon MEMS and silicon photonics.

Interaction of Interstellar Shocks with Dense Obstacles: Formation of ``Bullets''

Science.gov (United States)

Gvaramadze, V. V.

The so-called cumulative effect take place in converging conical shock waves arising behind dense obstacles overtaken by incident interstellar shock. A significant part of energy of converging flow of matter swept-up by a radiative conical shock can be transferred to a dense jet-like ejection (``bullet'') directed along the cone axis. Possible applications of this effect for star-forming regions (e.g., OMC-1) and supernova remnants (e.g., Vela SNR) are discussed.

Stress relaxing hyaluronic acid-collagen hydrogels promote cell spreading, fiber remodeling, and focal adhesion formation in 3D cell culture.

Science.gov (United States)

Lou, Junzhe; Stowers, Ryan; Nam, Sungmin; Xia, Yan; Chaudhuri, Ovijit

2018-02-01

The physical and architectural cues of the extracellular matrix (ECM) play a critical role in regulating important cellular functions such as spreading, migration, proliferation, and differentiation. Natural ECM is a complex viscoelastic scaffold composed of various distinct components that are often organized into a fibrillar microstructure. Hydrogels are frequently used as synthetic ECMs for 3D cell culture, but are typically elastic, due to covalent crosslinking, and non-fibrillar. Recent work has revealed the importance of stress relaxation in viscoelastic hydrogels in regulating biological processes such as spreading and differentiation, but these studies all utilize synthetic ECM hydrogels that are non-fibrillar. Key mechanotransduction events, such as focal adhesion formation, have only been observed in fibrillar networks in 3D culture to date. Here we present an interpenetrating network (IPN) hydrogel system based on HA crosslinked with dynamic covalent bonds and collagen I that captures the viscoelasticity and fibrillarity of ECM in tissues. The IPN hydrogels exhibit two distinct processes in stress relaxation, one from collagen and the other from HA crosslinking dynamics. Stress relaxation in the IPN hydrogels can be tuned by modulating HA crosslinker affinity, molecular weight of the HA, or HA concentration. Faster relaxation in the IPN hydrogels promotes cell spreading, fiber remodeling, and focal adhesion (FA) formation - behaviors often inhibited in other hydrogel-based materials in 3D culture. This study presents a new, broadly adaptable materials platform for mimicking key ECM features of viscoelasticity and fibrillarity in hydrogels for 3D cell culture and sheds light on how these mechanical and structural cues regulate cell behavior. Copyright © 2017 Elsevier Ltd. All rights reserved.

Intense, ultrashort light and dense, hot matter

Indian Academy of Sciences (India)

tiphoton and tunneling ionization, the physics of plasma formed in dense matter is .... A typical Gaussian laser pulse of 100 fs dura- .... J range) – and finally it is compressed back to its .... bond-hardening, molecular orientation and reori-.

Seeing the Forest Through the Trees: The Distribution and Properties of Dense Molecular Gas in the Milky Way Galaxy

Science.gov (United States)

Ellsworth-Bowers, Timothy P.

The Milky Way Galaxy serves as a vast laboratory for studying the dynamics and evolution of the dense interstellar medium and the processes of and surrounding massive star formation. From our vantage point within the Galactic plane, however, it has been extremely difficult to construct a coherent picture of Galactic structure; we cannot see the forest for the trees. The principal difficulties in studying the structure of the Galactic disk have been obscuration by the ubiquitous dust and molecular gas and confusion between objects along a line of sight. Recent technological advances have led to large-scale blind surveys of the Galactic plane at (sub-)millimeter wavelengths, where Galactic dust is generally optically thin, and have opened a new avenue for studying the forest. The Bolocam Galactic Plane Survey (BGPS) observed over 190 deg 2 of the Galactic plane in dust continuum emission near lambda = 1.1 mm, producing a catalog of over 8,000 dense molecular cloud structures across a wide swath of the Galactic disk. Deriving the spatial distribution and physical properties of these objects requires knowledge of distance, a component lacking in the data themselves. This thesis presents a generalized Bayesian probabilistic distance estimation method for dense molecular cloud structures, and demonstrates it with the BGPS data set. Distance probability density functions (DPDFs) are computed from kinematic distance likelihoods (which may be double- peaked for objects in the inner Galaxy) and an expandable suite of prior information to produce a comprehensive tally of our knowledge (and ignorance) of the distances to dense molecular cloud structures. As part of the DPDF formalism, this thesis derives several prior DPDFs for resolving the kinematic distance ambiguity in the inner Galaxy. From the collection of posterior DPDFs, a set of objects with well-constrained distance estimates is produced for deriving Galactic structure and the physical properties of dense molecular

Enhanced Productivity of Chemical Processes Using Dense Fluidized Beds

Energy Technology Data Exchange (ETDEWEB)

Sibashis Banerjee; Alvin Chen; Rutton Patel; Dale Snider; Ken Williams; Timothy O' Hern; Paul Tortora

2008-02-29

The work detailed in this report addresses Enabling Technologies within Computational Technology by integrating a “breakthrough” particle-fluid computational technology into traditional Process Science and Engineering Technology. The work completed under this DOE project addresses five major development areas 1) gas chemistry in dense fluidized beds 2) thermal cracking of liquid film on solids producing gas products 3) liquid injection in a fluidized bed with particle-to-particle liquid film transport 4) solid-gas chemistry and 5) first level validation of models. Because of the nature of the research using tightly coupled solids and fluid phases with a Lagrangian description of the solids and continuum description of fluid, the work provides ground-breaking advances in reactor prediction capability. This capability has been tested against experimental data where available. The commercial product arising out of this work is called Barracuda and is suitable for a wide (dense-to-dilute) range of industrial scale gas-solid flows with and without reactions. Commercial applications include dense gas-solid beds, gasifiers, riser reactors and cyclones.

Dense inorganic membranes - studies on transport properties, defect chemistry and catalytic behaviour

NARCIS (Netherlands)

ten Elshof, Johan E.

1997-01-01

Oxygen separation with dense oxide membranes may be an attractive method for the production of oxygen from air. Another possible application is the direct supply of oxygen in membrane reactors for the (partial) oxidation of hydrocarbons. The driving force for oxygen permeation through dense mixed

Tau nitration occurs at tyrosine 29 in the fibrillar lesions of Alzheimer's disease and other tauopathies.

Science.gov (United States)

Reynolds, Matthew R; Reyes, Juan F; Fu, Yifan; Bigio, Eileen H; Guillozet-Bongaarts, Angela L; Berry, Robert W; Binder, Lester I

2006-10-18

The neurodegenerative tauopathies are a clinically diverse group of diseases typified by the pathological self-assembly of the microtubule-associated tau protein. Although tau nitration is believed to influence the pathogenesis of these diseases, the precise residues modified, and the resulting effects on tau function, remain enigmatic. Previously, we demonstrated that nitration at residue Tyr29 markedly inhibits the ability of tau to self-associate and stabilize the microtubule lattice (Reynolds et al., 2005b, 2006). Here, we report the first monoclonal antibody to detect nitration in a protein-specific and site-selective manner. This reagent, termed Tau-nY29, recognizes tau only when nitrated at residue Tyr29. It does not cross-react with wild-type tau, tau mutants singly nitrated at Tyr18, Tyr197, and Tyr394, or other proteins known to be nitrated in neurodegenerative diseases. By Western blot analysis, Tau-nY29 detects soluble tau and paired helical filament tau from severely affected Alzheimer's brain but fails to recognize tau from normal aged brain. This observation suggests that nitration at Tyr29 is a disease-related event that may alter the intrinsic ability of tau to self-polymerize. In Alzheimer's brain, Tau-nY29 labels the fibrillar triad of tau lesions, including neurofibrillary tangles, neuritic plaques, and, to a lesser extent, neuropil threads. Intriguingly, although Tau-nY29 stains both the neuronal and glial tau pathology of Pick disease, it detects only the neuronal pathology in corticobasal degeneration and progressive supranuclear palsy without labeling the predominant glial pathology. Collectively, our findings provide the first direct evidence that site-specific tau nitration is linked to the progression of the neurodegenerative tauopathies.

On the dense water spreading off the Ross Sea shelf (Southern Ocean)

Science.gov (United States)

Budillon, G.; Gremes Cordero, S.; Salusti, E.

2002-07-01

In this study, current meter and hydrological data obtained during the X Italian Expedition in the Ross Sea (CLIMA Project) are analyzed. Our data show a nice agreement with previous data referring to the water masses present in this area and their dynamics. Here, they are used to further analyze the mixing and deepening processes of Deep Ice Shelf Water (DISW) over the northern shelf break of the Ross Sea. In more detail, our work is focused on the elementary mechanisms that are the most efficient in removing dense water from the shelf: either classical mixing effects or density currents that interact with some topographic irregularity in order to drop to deeper levels, or also the variability of the Antarctic Circumpolar Current (ACC) which, in its meandering, can push the dense water off the shelf, thus interrupting its geostrophic flow. We also discuss in detail the (partial) evidence of dramatic interactions of the dense water with bottom particulate, of geological or biological origin, thus generating impulsive or quasi-steady density-turbidity currents. This complex interaction allows one to consider bottom particular and dense water as a unique self-interacting system. In synthesis, this is a first tentative analysis of the effect of bottom particulate on the dense water dynamics in the Ross Sea.

DENSE MEDIUM CYCLONE OPTIMIZATON

Energy Technology Data Exchange (ETDEWEB)

Gerald H. Luttrell; Chris J. Barbee; Peter J. Bethell; Chris J. Wood

2005-06-30

Dense medium cyclones (DMCs) are known to be efficient, high-tonnage devices suitable for upgrading particles in the 50 to 0.5 mm size range. This versatile separator, which uses centrifugal forces to enhance the separation of fine particles that cannot be upgraded in static dense medium separators, can be found in most modern coal plants and in a variety of mineral plants treating iron ore, dolomite, diamonds, potash and lead-zinc ores. Due to the high tonnage, a small increase in DMC efficiency can have a large impact on plant profitability. Unfortunately, the knowledge base required to properly design and operate DMCs has been seriously eroded during the past several decades. In an attempt to correct this problem, a set of engineering tools have been developed to allow producers to improve the efficiency of their DMC circuits. These tools include (1) low-cost density tracers that can be used by plant operators to rapidly assess DMC performance, (2) mathematical process models that can be used to predict the influence of changes in operating and design variables on DMC performance, and (3) an expert advisor system that provides plant operators with a user-friendly interface for evaluating, optimizing and trouble-shooting DMC circuits. The field data required to develop these tools was collected by conducting detailed sampling and evaluation programs at several industrial plant sites. These data were used to demonstrate the technical, economic and environmental benefits that can be realized through the application of these engineering tools.

Dense strongly non-ideal plasma generation by laser isobaric heating

International Nuclear Information System (INIS)

Kulik, P.P.; Rozanov, E.K.; Riabii, V.A.; Titov, M.A.

1975-01-01

A method of generation of a dense strongly non-ideal plasma by slow isobaric heating of a small target in a high inert gas medium is discussed. The characteristic life-time of dense plasma is 10 -3 sec. Estimations show that such a plasma is homogeneous. Conditions are found for temperature uniformity. The experimental results of the isobaric heating of a thin potassium foil target by a ruby laser beam at 500 atm are described. (Auth.)

The sub-nucleolar localization of PHF6 defines its role in rDNA transcription and early processing events

Science.gov (United States)

Todd, Matthew A M; Huh, Michael S; Picketts, David J

2016-01-01

Ribosomal RNA synthesis occurs in the nucleolus and is a tightly regulated process that is targeted in some developmental diseases and hyperactivated in multiple cancers. Subcellular localization and immunoprecipitation coupled mass spectrometry demonstrated that a proportion of plant homeodomain (PHD) finger protein 6 (PHF6) protein is localized within the nucleolus and interacts with proteins involved in ribosomal processing. PHF6 sequence variants cause Börjeson–Forssman–Lehmann syndrome (BFLS, MIM#301900) and are also associated with a female-specific phenotype overlapping with Coffin–Siris syndrome (MIM#135900), T-cell acute lymphoblastic leukemia (MIM#613065), and acute myeloid leukemia (MIM#601626); however, very little is known about its cellular function, including its nucleolar role. HEK 293T cells were treated with RNase A, DNase I, actinomycin D, or 5,6-dichloro-β-D-ribofuranosylbenzimadole, followed by immunocytochemistry to determine PHF6 sub-nucleolar localization. We observed RNA-dependent localization of PHF6 to the sub-nucleolar fibrillar center (FC) and dense fibrillar component (DFC), at whose interface rRNA transcription occurs. Subsequent ChIP-qPCR analysis revealed strong enrichment of PHF6 across the entire rDNA-coding sequence but not along the intergenic spacer (IGS) region. When rRNA levels were quantified in a PHF6 gain-of-function model, we observed an overall decrease in rRNA transcription, accompanied by a modest increase in repressive promoter-associated RNA (pRNA) and a significant increase in the expression levels of the non-coding IGS36RNA and IGS39RNA transcripts. Collectively, our results demonstrate a role for PHF6 in carefully mediating the overall levels of ribosome biogenesis within a cell. PMID:27165002

Single-particle model of a strongly driven, dense, nanoscale quantum ensemble

Science.gov (United States)

DiLoreto, C. S.; Rangan, C.

2018-01-01

We study the effects of interatomic interactions on the quantum dynamics of a dense, nanoscale, atomic ensemble driven by a strong electromagnetic field. We use a self-consistent, mean-field technique based on the pseudospectral time-domain method and a full, three-directional basis to solve the coupled Maxwell-Liouville equations. We find that interatomic interactions generate a decoherence in the state of an ensemble on a much faster time scale than the excited-state lifetime of individual atoms. We present a single-particle model of the driven, dense ensemble by incorporating interactions into a dephasing rate. This single-particle model reproduces the essential physics of the full simulation and is an efficient way of rapidly estimating the collective dynamics of a dense ensemble.

Characterization of fibrillar collagens and extracellular matrix of glandular benign prostatic hyperplasia nodules.

Directory of Open Access Journals (Sweden)

Tyler M Bauman

Full Text Available Recent studies have associated lower urinary tract symptoms (LUTS in men with prostatic fibrosis, but a definitive link between collagen deposition and LUTS has yet to be demonstrated. The objective of this study was to evaluate ECM and collagen content within normal glandular prostate tissue and glandular BPH, and to evaluate the association of clinical parameters of LUTS with collagen content.Fibrillar collagen and ECM content was assessed in normal prostate (48 patients and glandular BPH nodules (24 patients using Masson's trichrome stain and Picrosirius red stain. Second harmonic generation (SHG imaging was used to evaluate collagen content. Additional BPH tissues (n = 47 were stained with Picrosirius red and the association between clinical parameters of BPH/LUTS and collagen content was assessed.ECM was similar in normal prostate and BPH (p = 0.44. Total collagen content between normal prostate and glandular BPH was similar (p = 0.27, but a significant increase in thicker collagen bundles was observed in BPH (p = 0.045. Using SHG imaging, collagen content in BPH (mean intensity = 62.52; SEM = 2.74 was significantly higher than in normal prostate (51.77±3.49; p = 0.02. Total collagen content was not associated with treatment with finasteride (p = 0.47 or α-blockers (p = 0.52, pre-TURP AUA symptom index (p = 0.90, prostate-specific antigen (p = 0.86, post-void residual (PVR; p = 0.32, prostate size (p = 0.21, or post-TURP PVR (p = 0.51. Collagen content was not associated with patient age in patients with BPH, however as men aged normal prostatic tissue had a decreased proportion of thick collagen bundles.The proportion of larger bundles of collagen, but not total collagen, is increased in BPH nodules, suggesting that these large fibers may play a role in BPH/LUTS. Total collagen content is independent of clinical parameters of BPH and LUTS. If fibrosis and overall ECM deposition are

APT: Action localization Proposals from dense Trajectories

NARCIS (Netherlands)

van Gemert, J.C.; Jain, M.; Gati, E.; Snoek, C.G.M.; Xie, X.; Jones, M.W.; Tam, G.K.L.

2015-01-01

This paper is on action localization in video with the aid of spatio-temporal proposals. To alleviate the computational expensive video segmentation step of existing proposals, we propose bypassing the segmentations completely by generating proposals directly from the dense trajectories used to

On the strain-induced fibrillar microstructure of polyethylene: Influence of chemical structure, initial morphology and draw temperature

Directory of Open Access Journals (Sweden)

B. Xiong

2016-04-01

Full Text Available The influence of crystalline microstructure and molecular topology on the strain-induced fibrillar transformation of semi-crystalline polyethylenes having various chemical structures including co-unit content and molecular weight and crystallized under various thermal treatments was studied by in situ SAXS at different draw temperatures. The long period of the nascent microfibrils, Lpf, proved to be strongly dependent on the draw temperature but non-sensitive to the initial crystallization conditions. Lpf was smaller than the initial long period. Both findings have been ascribed to the straininduced melting-recrystallization process as generally claimed in the literature. The microfibrils diameter, Df, was shown to depend on the draw temperature and initial microstructure in a different way as Lpf. The evolution of Df was shown to correlate with the interfacial layer thickness that mainly depends on the chemical structure of the chains. It was concluded that, in contrast to Lpf, the microfibril diameter should not be directly sensitive to the strain-induced melting-recrystallization. The proposed scenario is that after the generation of the protofibrils by fragmentation of the crystalline lamellae at yielding, the diameter of the microfibril during the course of their stabilization should be governed by the chain-unfolding and subsequent aggregation of the unfolded chains onto the lateral surface of the microfibrils. The morphogenesis of the microfibrils should therefore essentially depend on the chemical structure of the polymer that governs its crystallization ability, its chain topology and subsequently its fragmentation process at yielding. This scenario is summed up in a sketch.

The separation of solid and liquid components of mixtures

International Nuclear Information System (INIS)

Hunter, W.M.

1980-01-01

An improved method of separating solid and liquid components of mixtures is described which is particularly suited for use in automated radioimmunoassay systems in the analysis of bound and free fractions. A second liquid, having a density intermediate between those of the solid and liquid components, is delivered to the solid/ liquid mixture to form a discrete layer below the mixture and the solid separates into this lower liquid layer assisted by centrifugal force. The second liquid of intermediate density is an aqueous solution of a highly hydrophilic and electrically non-polar solute, such as an aqueous sucrose solution. Further liquids of intermediate density and progressively higher density may be delivered to form further discrete layers below the initial layer of the second dense liquid. After separation of the solid and liquid components of the mixture, the supernatant liquid component of the original mixture is removed in a controlled and non-turbulent manner. The method is illustrated in radioimmunoassays for platelet β-thromboglobulin and human follicle stimulating hormone. (U.K.)

Multicontextual correlates of energy-dense, nutrient-poor snack food consumption by adolescents.

Science.gov (United States)

Larson, Nicole; Miller, Jonathan M; Eisenberg, Marla E; Watts, Allison W; Story, Mary; Neumark-Sztainer, Dianne

2017-05-01

Frequent consumption of energy-dense, nutrient-poor snack foods is an eating behavior of public health concern. This study was designed to inform strategies for reducing adolescent intake of energy-dense snack foods by identifying individual and environmental influences. Surveys were completed in 2009-2010 by 2540 adolescents (54% females, mean age = 14.5 ± 2.0, 80% nonwhite) in Minneapolis-St. Paul, Minnesota schools. Daily servings of energy-dense snack food was assessed using a food frequency questionnaire that asked about consumption of 21 common snack food items, such as potato chips, cookies, and candy. Data representing characteristics of adolescents' environments were collected from parents/caregivers, friends, school personnel, Geographic Information System sources, and a content analysis of favorite television shows. Linear regression was used to examine relationships between each individual or environmental characteristic and snack food consumption in separate models and also to examine relationships in a model including all of the characteristics simultaneously. The factors found to be significantly associated with higher energy-dense snack food intake represented individual attitudes/behaviors (e.g., snacking while watching television) and characteristics of home/family (e.g., home unhealthy food availability), peer (friends' energy-dense snack food consumption), and school (e.g., student snack consumption norms) environments. In total, 25.5% of the variance in adolescents' energy-dense snack food consumption was explained when factors from within each context were examined together. The results suggest that the design of interventions targeting improvement in the dietary quality of adolescents' snack food choices should address relevant individual factors (e.g., eating while watching television) along with characteristics of their home/family (e.g., limiting the availability of unhealthy foods), peer (e.g., guiding the efforts of a peer leader in

Pulsar-irradiated stars in dense globular clusters

Science.gov (United States)

Tavani, Marco

1992-01-01

We discuss the properties of stars irradiated by millisecond pulsars in 'hard' binaries of dense globular clusters. Irradiation by a relativistic pulsar wind as in the case of the eclipsing millisecond pulsar PSR 1957+20 alter both the magnitude and color of the companion star. Some of the blue stragglers (BSs) recently discovered in dense globular clusters can be irradiated stars in binaries containing powerful millisecond pulsars. The discovery of pulsar-driven orbital modulations of BS brightness and color with periods of a few hours together with evidence for radio and/or gamma-ray emission from BS binaries would valuably contribute to the understanding of the evolution of collapsed stars in globular clusters. Pulsar-driven optical modulation of cluster stars might be the only observable effect of a new class of binary pulsars, i.e., hidden millisecond pulsars enshrouded in the evaporated material lifted off from the irradiated companion star.

Identifying women with dense breasts at high risk for interval cancer: a cohort study.

Science.gov (United States)

Kerlikowske, Karla; Zhu, Weiwei; Tosteson, Anna N A; Sprague, Brian L; Tice, Jeffrey A; Lehman, Constance D; Miglioretti, Diana L

2015-05-19

Twenty-one states have laws requiring that women be notified if they have dense breasts and that they be advised to discuss supplemental imaging with their provider. To better direct discussions of supplemental imaging by determining which combinations of breast cancer risk and Breast Imaging Reporting and Data System (BI-RADS) breast density categories are associated with high interval cancer rates. Prospective cohort. Breast Cancer Surveillance Consortium (BCSC) breast imaging facilities. 365,426 women aged 40 to 74 years who had 831,455 digital screening mammography examinations. BI-RADS breast density, BCSC 5-year breast cancer risk, and interval cancer rate (invasive cancer ≤12 months after a normal mammography result) per 1000 mammography examinations. High interval cancer rate was defined as more than 1 case per 1000 examinations. High interval cancer rates were observed for women with 5-year risk of 1.67% or greater and extremely dense breasts or 5-year risk of 2.50% or greater and heterogeneously dense breasts (24% of all women with dense breasts). The interval rate of advanced-stage disease was highest (>0.4 case per 1000 examinations) among women with 5-year risk of 2.50% or greater and heterogeneously or extremely dense breasts (21% of all women with dense breasts). Five-year risk was low to average (0% to 1.66%) for 51.0% of women with heterogeneously dense breasts and 52.5% with extremely dense breasts, with interval cancer rates of 0.58 to 0.63 and 0.72 to 0.89 case per 1000 examinations, respectively. The benefit of supplemental imaging was not assessed. Breast density should not be the sole criterion for deciding whether supplemental imaging is justified because not all women with dense breasts have high interval cancer rates. BCSC 5-year risk combined with BI-RADS breast density can identify women at high risk for interval cancer to inform patient-provider discussions about alternative screening strategies. National Cancer Institute.

The chemistry of two-component fluoride crystalline optical media for heavy, fast, radiation hard scintillators

International Nuclear Information System (INIS)

Sobolev, B.P.; Krivandina, E.A.; Fedorov, P.P.; Vasilchenko, V.G.

1994-01-01

Prospects for preparation of two-component dense optical materials for scintillators are shown, using data on phase diagrams of about 300 MF m - RF n (m, n ≤ 4) type systems, formed by metal fluorides. Primary characteristics (decay time and light output of luminescence, radiation hardness, etc.) of some multicomponent crystals are reported

Green-function description of dense polymeric systems

NARCIS (Netherlands)

Schoot, van der P.P.A.M.

2000-01-01

A self-consistent Green-function description of concentrated polymer solutions and dense polymeric melts is presented. The method, which applies to both uniform and nonuniform systems, is used in this work to calculate the static structure factor of a homogeneous fluid of Gaussian model chains.

Dual-affinity peptides to generate dense surface coverages of nanoparticles

International Nuclear Information System (INIS)

Del Re, Julia; Blum, Amy Szuchmacher

2014-01-01

Graphical abstract: - Highlights: • Stable nanoparticles were created with the Flg-A3 fusion peptide as a ligand. • Interactions of transition metal ions with Flg control aggregation of the nanoparticles in solution. • The QBP1-A3 fusion peptide improves surface attachment of gold nanoparticles. • Solution pre-aggregation of nanoparticles results in dense surface coverage. - Abstract: Depositing gold nanoparticles is of great interest because of the many potential applications of nanoparticle films; however, generating dense surface nanoparticle coverage remains a difficult challenge. Using dual-affinity peptides we have synthesized gold nanoparticles and then pre-aggregated the particles in solution via interactions with metal ions. These nanoparticle aggregates were then deposited onto silicon dioxide surfaces using another dual-affinity peptide to control binding to the substrate. The results demonstrate that when divalent ions like Zn 2+ or Ni 2+ are used, densely packed gold nanoparticle monolayers are formed on the silicon dioxide substrate, which may have applications in fields like molecular electronics

Dense high-temperature plasma transport processes

International Nuclear Information System (INIS)

Giniyatova, Sh.G.

2002-01-01

In this work the transport processes in dense high-temperature semiclassical plasma are studied on the base of the kinetic equation, where the semiclassical potential was used, in its collision integral. The coefficient of plasma electrical conductivity, viscosity and thermal conductivity were received. There were compared with the other authors' results. The Grad's method was used obtaining of viscosity and thermal coefficients. (author)

Rheological Behavior of Dense Assemblies of Granular Materials

International Nuclear Information System (INIS)

Sundaresan, Sankaran; Tardos, Gabriel I.; Subramaniam, Shankar

2011-01-01

Assemblies of granular materials behave differently when they are owing rapidly, from when they are slowly deforming. The behavior of rapidly owing granular materials, where the particle-particle interactions occur largely through binary collisions, is commonly related to the properties of the constituent particles through the kinetic theory of granular materials. The same cannot be said for slowly moving or static assemblies of granular materials, where enduring contacts between particles are prevalent. For instance, a continuum description of the yield characteristics of dense assemblies of particles in the quasistatic ow regime cannot be written explicitly on the basis of particle properties, even for cohesionless particles. Continuum models for this regime have been proposed and applied, but these models typically assume that the assembly is at incipient yield and they are expressed in terms of the yield function, which we do not yet know how to express in terms of particle-level properties. The description of the continuum rheology in the intermediate regime is even less understood. Yet, many practically important flows in nature and in a wide range of technological applications occur in the dense flow regime and at the transition between dilute and dense regimes; the lack of validated continuum rheological models for particle assemblies in these regimes limits predictive modeling of such flows. This research project is aimed at developing such rheological models.

Expected satiation after repeated consumption of low- or high-energy-dense soup

NARCIS (Netherlands)

Hogenkamp, P.S.; Brunstrom, J.M.; Stafleu, A.; Mars, M.; Graaf, de C.

2012-01-01

We investigated whether repeated consumption of a low-energy-dense (LED; 208 kJ/100 g) or high-energy-dense (HED; 645 kJ/100 g) soup modifies expectations relating to the satiating capacity of the food, and its subsequent intake. In study 1, participants consumed either a novel-flavoured LED (n 32;

Expected satiation after repeated consumption of low-or high-energy-dense soup

NARCIS (Netherlands)

Hogenkamp, P.S.; Brunstrom, J.M.; Stafleu, A.; Mars, M.; Graaf, C. de

2012-01-01

We investigated whether repeated consumption of a low-energy-dense (LED; 208 kJ/100 g) or high-energy-dense (HED; 645 kJ/100 g) soup modifies expectations relating to the satiating capacity of the food, and its subsequent intake. In study 1, participants consumed either a novel-flavoured LED (n 32;

Battery-powered bone drill: caution needed in densely blastic lesions

Energy Technology Data Exchange (ETDEWEB)

Chang, Connie Y.; Simeone, F.J.; Huang, Ambrose J. [Massachusetts General Hospital, Division of Musculoskeletal Imaging and Intervention, Department of Radiology, Boston, MA (United States)

2015-12-15

Image-guided biopsies play an important role for pathologic diagnosis of bone tumors. Recently, motorized, battery powered bone marrow biopsy devices have been used to biopsy focal bone lesions with high accuracy. We present here two cases of densely blastic metastases where the biopsy sample could not be removed from the needle. These two cases suggest that if the lesion is densely blastic, then the sample should be small (<5 mm) to ensure that the biopsy specimen will not be stuck within the biopsy needle. (orig.)

Experimental study of ion stopping power in warm dense matter: charge-state distribution measurements of ions leaving warm dense matter

International Nuclear Information System (INIS)

Gauthier, Maxence

2013-01-01

The determination if the ion slowing down process (or stopping power) in warm dense matter is essential especially in the frame of inertial confinement fusion. During my thesis, our interest was driven by the modification of the charge state of ion beam emerging from warm dense matter, this quantity playing a major role in ion stopping power calculation. We took advantage of the properties exhibited by ion beams produced by high intensity short pulse lasers to study during two experiments performed at ELFIE and TITAN facilities, the charge state modification of a carbon and helium ion beams emerging from an aluminum foil isochorically heated by an energetic proton beam. In the first two chapters are presented the major challenges regarding the subject from both a theoretical and experimental point of view. Here are exposed the different simulation tools used during the thesis. The third chapter is devoted to the study of the property of laser-produced ion beams in the scope of our experiments aiming at studying the stopping power. We have studied in particular ion beams generated using lower-than-solid density targets during two experiments: helium gas jet and laser-exploded target. In the last chapter are presented the set-ups and results of the two experiments on the charge state of ion beam emerging from warm dense matter. The data we measured in solid-density cold aluminum are successfully compared with the results already obtained in conventional accelerators. (author) [fr

Dense Clustered Multi-Channel Wireless Sensor Cloud

Directory of Open Access Journals (Sweden)

Sivaramakrishnan Sivakumar

2015-08-01

Full Text Available Dense Wireless Sensor Network Clouds have an inherent issue of latency and packet drops with regards to data collection. Though there is extensive literature that tries to address these issues through either scheduling, channel contention or a combination of the two, the problem still largely exists. In this paper, a Clustered Multi-Channel Scheduling Protocol (CMSP is designed that creates a Voronoi partition of a dense network. Each partition is assigned a channel, and a scheduling scheme is adopted to collect data within the Voronoi partitions. This scheme collects data from the partitions concurrently and then passes it to the base station. CMSP is compared using simulation with other multi-channel protocols like Tree-based Multi-Channel, Multi-Channel MAC and Multi-frequency Media Access Control for wireless sensor networks. Results indicate CMSP has higher throughput and data delivery ratio at a lower power consumption due to network partitioning and hierarchical scheduling that minimizes load on the network.

Anomalous properties of hot dense nonequilibrium plasmas

International Nuclear Information System (INIS)

Ferrante, G; Zarcone, M; Uryupin, S A

2005-01-01

A concise overview of a number of anomalous properties of hot dense nonequilibrium plasmas is given. The possibility of quasistationary megagauss magnetic field generation due to Weibel instability is discussed for plasmas created in atom tunnel ionization. The collisionless absorption and reflection of a test electromagnetic wave normally impinging on the plasma with two-temperature bi-maxwellian electron velocity distribution function are studied. Due to the wave magnetic field influence on the electron kinetics in the skin layer the wave absorption and reflection significantly depend on the degree of the electron temperature anisotropy. The linearly polarized impinging wave during reflection transforms into an elliptically polarized one. The problem of transmission of an ultrashort laser pulse through a layer of dense plasma, formed as a result of ionization of a thin foil, is considered. It is shown that the strong photoelectron distribution anisotropy yields an anomalous penetration of the wave field through the foil

Deterministic dense coding with partially entangled states

Science.gov (United States)

Mozes, Shay; Oppenheim, Jonathan; Reznik, Benni

2005-01-01

The utilization of a d -level partially entangled state, shared by two parties wishing to communicate classical information without errors over a noiseless quantum channel, is discussed. We analytically construct deterministic dense coding schemes for certain classes of nonmaximally entangled states, and numerically obtain schemes in the general case. We study the dependency of the maximal alphabet size of such schemes on the partially entangled state shared by the two parties. Surprisingly, for d>2 it is possible to have deterministic dense coding with less than one ebit. In this case the number of alphabet letters that can be communicated by a single particle is between d and 2d . In general, we numerically find that the maximal alphabet size is any integer in the range [d,d2] with the possible exception of d2-1 . We also find that states with less entanglement can have a greater deterministic communication capacity than other more entangled states.

Segmentation of Shadowed Buildings in Dense Urban Areas from Aerial Photographs

OpenAIRE

Susaki, Junichi

2012-01-01

Segmentation of buildings in urban areas, especially dense urban areas, by using remotely sensed images is highly desirable. However, segmentation results obtained by using existing algorithms are unsatisfactory because of the unclear boundaries between buildings and the shadows cast by neighboring buildings. In this paper, an algorithm is proposed that successfully segments buildings from aerial photographs, including shadowed buildings in dense urban areas. To handle roofs having rough text...

Physics of dense matter, neutron stars, and supernova

International Nuclear Information System (INIS)

Glendenning, N.K.

1989-02-01

Nuclear and astrophysical evidence on the equation of state of dense matter is examined. The role of hyperonization of matter in the development of proto-neutron stars is briefly discussed. 7 refs., 4 figs

Reply to 'Comment on 'Quantum dense key distribution''

International Nuclear Information System (INIS)

Degiovanni, I.P.; Berchera, I. Ruo; Castelletto, S.; Rastello, M.L.; Bovino, F.A.; Colla, A.M.; Castagnoli, G.

2005-01-01

In this Reply we propose a modified security proof of the quantum dense key distribution protocol, detecting also the eavesdropping attack proposed by Wojcik in his Comment [Wojcik, Phys. Rev. A 71, 016301 (2005)

Architecture of a modular, multichannel readout system for dense electrochemical biosensor microarrays

International Nuclear Information System (INIS)

Ramfos, Ioannis; Birbas, Alexios; Blionas, Spyridon

2015-01-01

The architecture of a modular, multichannel readout system for dense electrochemical microarrays, targeting Lab-on-a-Chip applications, is presented. This approach promotes efficient component reusability through a hybrid multiplexing methodology, maintaining high levels of sampling performance and accuracy. Two readout modes are offered, which can be dynamically interchanged following signal profiling, to cater for both rapid signal transitions and weak current responses. Additionally, functional extensions to the described architecture are discussed, which provide the system with multi-biasing capabilities. A prototype integrated circuit of the proposed architecture’s analog core and a supporting board were implemented to verify the working principles. The system was evaluated using standard loads, as well as electrochemical sensor arrays. Through a range of operating conditions and loads, the prototype exhibited a highly linear response and accurately delivered the readout of input signals with fast transitions and wide dynamic ranges. (paper)

The mesangial matrix in the normal and sclerotic glomerulus.

Science.gov (United States)

Rosenblum, N D

1994-02-01

Mesangial sclerosis is a final common pathway to glomerular destruction in a variety of glomerular diseases. The expression of several classes of extracellular matrix (ECM) molecules has been defined in the normal and diseased mesangial matrix (MM). However, the manner in which these ECM components determine the three dimensional structure and function of the MM remains to be defined. Structural studies of the MM suggest that its constituent molecules are regionally organized into subcompartments with different three dimensional structures. The diversity of matrix molecules expressed within the MM as well as the organization of these components in nonrenal ECM's, such as the cornea, provides further support for this organizational model. The study of the cornea has also revealed that novel short chain collagenous proteins partially determine the three dimensional structure of the matrix. Recently, a novel collagen, type VIII collagen, has been described in mesangial cells and in the intact glomerulus. It is hypothesized that type VIII collagen is expressed both as a polymer and as a monomer within the glomerulus, and depending on its conformation, may serve unique functions. In the chronically diseased MM, normal MM components are overexpressed and fibrillar collagens are expressed de novo in a delayed fashion. Enhanced proteoglycan expression, observed early in disease, may determine increased volume of the mesangium. This, in turn, may stimulate the production of fibrillar collagens by mesangial cells resulting in a fibrillar noncompliant mesangial matrix.

Densely ionizing radiation affects DNA methylation of selective LINE-1 elements

Energy Technology Data Exchange (ETDEWEB)

Prior, Sara; Miousse, Isabelle R. [Department of Environmental and Occupational Health, Fay W. Boozman College of Public Health, University of Arkansas for Medical Sciences, Little Rock, AR 72205 (United States); Nzabarushimana, Etienne [Department of Environmental and Occupational Health, Fay W. Boozman College of Public Health, University of Arkansas for Medical Sciences, Little Rock, AR 72205 (United States); Department of Bioinformatics, School of Informatics and Computing, Indiana University, Bloomington, IN 47405 (United States); Pathak, Rupak [Division of Radiation Health, Department of Pharmaceutical Sciences, College of Pharmacy, University of Arkansas for Medical Sciences, Little Rock, AR 72205 (United States); Skinner, Charles; Kutanzi, Kristy R. [Department of Environmental and Occupational Health, Fay W. Boozman College of Public Health, University of Arkansas for Medical Sciences, Little Rock, AR 72205 (United States); Allen, Antiño R. [Division of Radiation Health, Department of Pharmaceutical Sciences, College of Pharmacy, University of Arkansas for Medical Sciences, Little Rock, AR 72205 (United States); Raber, Jacob [Departments of Behavioral Neuroscience, Neurology, and Radiation Medicine, Division of Neuroscience, ONPRC, Oregon Health & Science University, Portland, OR 97239 (United States); Tackett, Alan J. [Department of Biochemistry, College of Medicine, University of Arkansas for Medical Sciences, Little Rock, AR 72205 (United States); Hauer-Jensen, Martin [Division of Radiation Health, Department of Pharmaceutical Sciences, College of Pharmacy, University of Arkansas for Medical Sciences, Little Rock, AR 72205 (United States); Nelson, Gregory A. [Department of Basic Sciences, Division of Radiation Research, Loma Linda University, Loma Linda, CA 92350 (United States); and others

2016-10-15

Long Interspersed Nucleotide Element 1 (LINE-1) retrotransposons are heavily methylated and are the most abundant transposable elements in mammalian genomes. Here, we investigated the differential DNA methylation within the LINE-1 under normal conditions and in response to environmentally relevant doses of sparsely and densely ionizing radiation. We demonstrate that DNA methylation of LINE-1 elements in the lungs of C57BL6 mice is dependent on their evolutionary age, where the elder age of the element is associated with the lower extent of DNA methylation. Exposure to 5-aza-2′-deoxycytidine and methionine-deficient diet affected DNA methylation of selective LINE-1 elements in an age- and promoter type-dependent manner. Exposure to densely IR, but not sparsely IR, resulted in DNA hypermethylation of older LINE-1 elements, while the DNA methylation of evolutionary younger elements remained mostly unchanged. We also demonstrate that exposure to densely IR increased mRNA and protein levels of LINE-1 via the loss of the histone H3K9 dimethylation and an increase in the H3K4 trimethylation at the LINE-1 5′-untranslated region, independently of DNA methylation. Our findings suggest that DNA methylation is important for regulation of LINE-1 expression under normal conditions, but histone modifications may dictate the transcriptional activity of LINE-1 in response to exposure to densely IR. - Highlights: • DNA methylation of LINE-1 elements is dependent on their evolutionary age. • Densely ionizing radiation affects DNA methylation of selective LINE-1 elements. • Radiation-induced reactivation of LINE-1 is DNA methylation-independent. • Histone modifications dictate the transcriptional activity of LINE-1.

Densely ionizing radiation affects DNA methylation of selective LINE-1 elements

International Nuclear Information System (INIS)

Prior, Sara; Miousse, Isabelle R.; Nzabarushimana, Etienne; Pathak, Rupak; Skinner, Charles; Kutanzi, Kristy R.; Allen, Antiño R.; Raber, Jacob; Tackett, Alan J.; Hauer-Jensen, Martin; Nelson, Gregory A.

2016-01-01

Long Interspersed Nucleotide Element 1 (LINE-1) retrotransposons are heavily methylated and are the most abundant transposable elements in mammalian genomes. Here, we investigated the differential DNA methylation within the LINE-1 under normal conditions and in response to environmentally relevant doses of sparsely and densely ionizing radiation. We demonstrate that DNA methylation of LINE-1 elements in the lungs of C57BL6 mice is dependent on their evolutionary age, where the elder age of the element is associated with the lower extent of DNA methylation. Exposure to 5-aza-2′-deoxycytidine and methionine-deficient diet affected DNA methylation of selective LINE-1 elements in an age- and promoter type-dependent manner. Exposure to densely IR, but not sparsely IR, resulted in DNA hypermethylation of older LINE-1 elements, while the DNA methylation of evolutionary younger elements remained mostly unchanged. We also demonstrate that exposure to densely IR increased mRNA and protein levels of LINE-1 via the loss of the histone H3K9 dimethylation and an increase in the H3K4 trimethylation at the LINE-1 5′-untranslated region, independently of DNA methylation. Our findings suggest that DNA methylation is important for regulation of LINE-1 expression under normal conditions, but histone modifications may dictate the transcriptional activity of LINE-1 in response to exposure to densely IR. - Highlights: • DNA methylation of LINE-1 elements is dependent on their evolutionary age. • Densely ionizing radiation affects DNA methylation of selective LINE-1 elements. • Radiation-induced reactivation of LINE-1 is DNA methylation-independent. • Histone modifications dictate the transcriptional activity of LINE-1.

IrisDenseNet: Robust Iris Segmentation Using Densely Connected Fully Convolutional Networks in the Images by Visible Light and Near-Infrared Light Camera Sensors.

Science.gov (United States)

Arsalan, Muhammad; Naqvi, Rizwan Ali; Kim, Dong Seop; Nguyen, Phong Ha; Owais, Muhammad; Park, Kang Ryoung

2018-05-10

The recent advancements in computer vision have opened new horizons for deploying biometric recognition algorithms in mobile and handheld devices. Similarly, iris recognition is now much needed in unconstraint scenarios with accuracy. These environments make the acquired iris image exhibit occlusion, low resolution, blur, unusual glint, ghost effect, and off-angles. The prevailing segmentation algorithms cannot cope with these constraints. In addition, owing to the unavailability of near-infrared (NIR) light, iris recognition in visible light environment makes the iris segmentation challenging with the noise of visible light. Deep learning with convolutional neural networks (CNN) has brought a considerable breakthrough in various applications. To address the iris segmentation issues in challenging situations by visible light and near-infrared light camera sensors, this paper proposes a densely connected fully convolutional network (IrisDenseNet), which can determine the true iris boundary even with inferior-quality images by using better information gradient flow between the dense blocks. In the experiments conducted, five datasets of visible light and NIR environments were used. For visible light environment, noisy iris challenge evaluation part-II (NICE-II selected from UBIRIS.v2 database) and mobile iris challenge evaluation (MICHE-I) datasets were used. For NIR environment, the institute of automation, Chinese academy of sciences (CASIA) v4.0 interval, CASIA v4.0 distance, and IIT Delhi v1.0 iris datasets were used. Experimental results showed the optimal segmentation of the proposed IrisDenseNet and its excellent performance over existing algorithms for all five datasets.

IrisDenseNet: Robust Iris Segmentation Using Densely Connected Fully Convolutional Networks in the Images by Visible Light and Near-Infrared Light Camera Sensors

Directory of Open Access Journals (Sweden)

Muhammad Arsalan

2018-05-01

Full Text Available The recent advancements in computer vision have opened new horizons for deploying biometric recognition algorithms in mobile and handheld devices. Similarly, iris recognition is now much needed in unconstraint scenarios with accuracy. These environments make the acquired iris image exhibit occlusion, low resolution, blur, unusual glint, ghost effect, and off-angles. The prevailing segmentation algorithms cannot cope with these constraints. In addition, owing to the unavailability of near-infrared (NIR light, iris recognition in visible light environment makes the iris segmentation challenging with the noise of visible light. Deep learning with convolutional neural networks (CNN has brought a considerable breakthrough in various applications. To address the iris segmentation issues in challenging situations by visible light and near-infrared light camera sensors, this paper proposes a densely connected fully convolutional network (IrisDenseNet, which can determine the true iris boundary even with inferior-quality images by using better information gradient flow between the dense blocks. In the experiments conducted, five datasets of visible light and NIR environments were used. For visible light environment, noisy iris challenge evaluation part-II (NICE-II selected from UBIRIS.v2 database and mobile iris challenge evaluation (MICHE-I datasets were used. For NIR environment, the institute of automation, Chinese academy of sciences (CASIA v4.0 interval, CASIA v4.0 distance, and IIT Delhi v1.0 iris datasets were used. Experimental results showed the optimal segmentation of the proposed IrisDenseNet and its excellent performance over existing algorithms for all five datasets.

Axonal transport and secretion of fibrillar forms of α-synuclein, Aβ42 peptide and HTTExon 1.

Science.gov (United States)

Brahic, Michel; Bousset, Luc; Bieri, Gregor; Melki, Ronald; Gitler, Aaron D

2016-04-01

Accruing evidence suggests that prion-like behavior of fibrillar forms of α-synuclein, β-amyloid peptide and mutant huntingtin are responsible for the spread of the lesions that characterize Parkinson disease, Alzheimer disease and Huntington disease, respectively. It is unknown whether these distinct protein assemblies are transported within and between neurons by similar or distinct mechanisms. It is also unclear if neuronal death or injury is required for neuron-to-neuron transfer. To address these questions, we used mouse primary cortical neurons grown in microfluidic devices to measure the amounts of α-synuclein, Aβ42 and HTTExon1 fibrils transported by axons in both directions (anterograde and retrograde), as well as to examine the mechanism of their release from axons after anterograde transport. We observed that the three fibrils were transported in both anterograde and retrograde directions but with strikingly different efficiencies. The amount of Aβ42 fibrils transported was ten times higher than that of the other two fibrils. HTTExon1 was efficiently transported in the retrograde direction but only marginally in the anterograde direction. Finally, using neurons from two distinct mutant mouse strains whose axons are highly resistant to neurodegeneration (Wld(S) and Sarm1(-/-)), we found that the three different fibrils were secreted by axons after anterograde transport, in the absence of axonal lysis, indicating that trans-neuronal spread can occur in intact healthy neurons. In summary, fibrils of α-synuclein, Aβ42 and HTTExon1 are all transported in axons but in directions and amounts that are specific of each fibril. After anterograde transport, the three fibrils were secreted in the medium in the absence of axon lysis. Continuous secretion could play an important role in the spread of pathology between neurons but may be amenable to pharmacological intervention.

Dense gas and star formation in individual Giant Molecular Clouds in M31

Science.gov (United States)

Viaene, S.; Forbrich, J.; Fritz, J.

2018-04-01

Studies both of entire galaxies and of local Galactic star formation indicate a dependency of a molecular cloud's star formation rate (SFR) on its dense gas mass. In external galaxies, such measurements are derived from HCN(1-0) observations, usually encompassing many Giant Molecular Clouds (GMCs) at once. The Andromeda galaxy (M31) is a unique laboratory to study the relation of the SFR and HCN emission down to GMC scales at solar-like metallicities. In this work, we correlate our composite SFR determinations with archival HCN, HCO+, and CO observations, resulting in a sample of nine reasonably representative GMCs. We find that, at the scale of individual clouds, it is important to take into account both obscured and unobscured star formation to determine the SFR. When correlated against the dense-gas mass from HCN, we find that the SFR is low, in spite of these refinements. We nevertheless retrieve an SFR-dense-gas mass correlation, confirming that these SFR tracers are still meaningful on GMC scales. The correlation improves markedly when we consider the HCN/CO ratio instead of HCN by itself. This nominally indicates a dependency of the SFR on the dense-gas fraction, in contradiction to local studies. However, we hypothesize that this partly reflects the limited dynamic range in dense-gas mass, and partly that the ratio of single-pointing HCN and CO measurements may be less prone to systematics like sidelobes. In this case, the HCN/CO ratio would importantly be a better empirical measure of the dense-gas content itself.

Tripolar vortex formation in dense quantum plasma with ion-temperature-gradients

Science.gov (United States)

Qamar, Anisa; Ata-ur-Rahman, Mirza, Arshad M.

2012-05-01

We have derived system of nonlinear equations governing the dynamics of low-frequency electrostatic toroidal ion-temperature-gradient mode for dense quantum magnetoplasma. For some specific profiles of the equilibrium density, temperature, and ion velocity gradients, the nonlinear equations admit a stationary solution in the form of a tripolar vortex. These results are relevant to understand nonlinear structure formation in dense quantum plasmas in the presence of equilibrium ion-temperature and density gradients.

Tripolar vortex formation in dense quantum plasma with ion-temperature-gradients

Energy Technology Data Exchange (ETDEWEB)

Qamar, Anisa; Ata-ur-Rahman [Institute of Physics and Electronics, University of Peshawar, Khyber Pakhtoon Khwa 25000 (Pakistan); National Center for Physics Shahdrah Valley Road, Islamabad 44000 (Pakistan); Mirza, Arshad M. [Theoretical Plasma Physics Group, Physics Department, Quaid-i-Azam University, Islamabad 45320 (Pakistan)

2012-05-15

We have derived system of nonlinear equations governing the dynamics of low-frequency electrostatic toroidal ion-temperature-gradient mode for dense quantum magnetoplasma. For some specific profiles of the equilibrium density, temperature, and ion velocity gradients, the nonlinear equations admit a stationary solution in the form of a tripolar vortex. These results are relevant to understand nonlinear structure formation in dense quantum plasmas in the presence of equilibrium ion-temperature and density gradients.

Tripolar vortex formation in dense quantum plasma with ion-temperature-gradients

International Nuclear Information System (INIS)

Qamar, Anisa; Ata-ur-Rahman; Mirza, Arshad M.

2012-01-01

We have derived system of nonlinear equations governing the dynamics of low-frequency electrostatic toroidal ion-temperature-gradient mode for dense quantum magnetoplasma. For some specific profiles of the equilibrium density, temperature, and ion velocity gradients, the nonlinear equations admit a stationary solution in the form of a tripolar vortex. These results are relevant to understand nonlinear structure formation in dense quantum plasmas in the presence of equilibrium ion-temperature and density gradients.

Observations of non-linear plasmon damping in dense plasmas

Science.gov (United States)

Witte, B. B. L.; Sperling, P.; French, M.; Recoules, V.; Glenzer, S. H.; Redmer, R.

2018-05-01

We present simulations using finite-temperature density-functional-theory molecular-dynamics to calculate dynamic dielectric properties in warm dense aluminum. The comparison between exchange-correlation functionals in the Perdew, Burke, Ernzerhof approximation, Strongly Constrained and Appropriately Normed Semilocal Density Functional, and Heyd, Scuseria, Ernzerhof (HSE) approximation indicates evident differences in the electron transition energies, dc conductivity, and Lorenz number. The HSE calculations show excellent agreement with x-ray scattering data [Witte et al., Phys. Rev. Lett. 118, 225001 (2017)] as well as dc conductivity and absorption measurements. These findings demonstrate non-Drude behavior of the dynamic conductivity above the Cooper minimum that needs to be taken into account to determine optical properties in the warm dense matter regime.

Densely crosslinked polycarbosiloxanes .2. Thermal and mechanical properties

NARCIS (Netherlands)

Flipsen, T.A C; Derks, R.; van der Vegt, H.A.; Stenekes, R.; Pennings, A.J; Hadziioannou, G

1997-01-01

The thermal and mechanical properties of two densely crosslinked polycarbosiloxane systems were investigated in relation to the molecular structure. The networks were prepared from functional branched prepolymers and crosslinked via a hydrosilylation curing reaction. The prepolymers having only

Dilemmas of Warfare in Densely Populated Civilian Areas

OpenAIRE

Moshe Tamir

2012-01-01

This essay attempts to present operational perspectives on conducting warfare in densely populated areas. It also distinguishes between three types of combat within this general category, with the goal of shedding light on this complex type of warfare.

Fabrication of dense panels in lithium fluoride; Fabrication de panneaux denses en fluorure de lithium

Energy Technology Data Exchange (ETDEWEB)

Farcy, P.; Roger, J.; Pointud, R.

1958-04-15

The authors report a study aimed at the fabrication of large and dense lithium fluoride panels. This sintered lithium fluoride is then supposed to be used for the construction of barriers of protection against a flow of thermal neutrons. They briefly present the raw material which is used under the form of chamotte obtained through a pre-sintering process which is also described. Grain size measurements and sample preparation are indicated. Shaping, drying, and thermal treatment are briefly described, and characteristics of the sintered product are indicated.

Temperature Measurements of Dense Plasmas by Detailed Balance

International Nuclear Information System (INIS)

Holl, A; Redmer, R; Ropke, G; Reinholz, H; Thiele, R; Fortmann, C; Forster, E; Cao, L; Tschentscher, T; Toleikis, S; Glenzer, S H

2006-01-01

Plasmas at high electron densities of n e = 10 20 - 10 26 cm -3 and moderate temperatures T e = 1 - 20 eV are important for laboratory astrophysics, high energy density science and inertial confinement fusion. These plasmas are usually referred to as Warm Dense Matter (WDM) and are characterized by a coupling parameter of Λ ∼> 1 where correlations become important. The characterization of such plasmas is still a challenging task due to the lack of direct measurement techniques for temperatures and densities. They propose to measure the Thomson scattering spectrum of vacuum-UV radiation off density fluctuations in the plasma. Collective Thomson scattering provides accurate data for the electron temperature applying first principles. Further, this method takes advantage of the spectral asymmetry resulting from detailed balance and is independent of collisional effects in these dense systems

Dense-plasma research using ballistic compressors

International Nuclear Information System (INIS)

Hess, H.

1986-01-01

An introduction is given to research on dense (or nonideal) plasmas which can be generated to advantage by ballistic compressors. Some properties of ballistic compressors are discussed especially in comparison with shock tubes. A short review is given on the history of these devices for high-pressure plasma generation. The present state of the art is reported including research on the two ZIE (Central Institute for Electron Physics) ballistic compressors. (author)

Free-free opacity in dense plasmas with an average atom model

International Nuclear Information System (INIS)

Shaffer, Nathaniel R.; Ferris, Natalie G.; Colgan, James Patrick; Kilcrease, David Parker; Starrett, Charles Edward

2017-01-01

A model for the free-free opacity of dense plasmas is presented. The model uses a previously developed average atom model, together with the Kubo-Greenwood model for optical conductivity. This, in turn, is used to calculate the opacity with the Kramers-Kronig dispersion relations. Furthermore, comparisons to other methods for dense deuterium results in excellent agreement with DFT-MD simulations, and reasonable agreement with a simple Yukawa screening model corrected to satisfy the conductivity sum rule.

Numerical Simulation on Dense Packing of Granular Materials by Container Oscillation

OpenAIRE

Jun Liu; Dongxu You

2013-01-01

The packing of granular materials is a basic and important problem in geomechanics. An approach, which generates dense packing of spheres confined in cylindrical and cuboidal containers in three steps, is introduced in this work. A loose packing structure is first generated by means of a reference lattice method. Then a dense packing structure is obtained in a container by simulating dropping of particles under gravitational forces. Furthermore, a scheme that makes the bottom boundary fluctua...

Propagation of complex shaped ultrafast pulses in highly optically dense samples

International Nuclear Information System (INIS)

Davis, J. C.; Fetterman, M. R.; Warren, W. S.; Goswami, D.

2008-01-01

We examine the propagation of shaped (amplitude- and frequency-modulated) ultrafast laser pulses through optically dense rubidium vapor. Pulse reshaping, stimulated emission dynamics, and residual electronic excitation all strongly depend on the laser pulse shape. For example, frequency swept pulses, which produce adiabatic passage in the optically thin limit (independent of the sign of the frequency sweep), behave unexpectedly in optically dense samples. Paraxial Maxwell optical Bloch equations can model our ultrafast pulse propagation results well and provide insight

Dense understory dwarf bamboo alters the retention of canopy tree seeds

Science.gov (United States)

Qian, Feng; Zhang, Tengda; Guo, Qinxue; Tao, Jianping

2016-05-01

Tree seed retention is thought to be an important factor in the process of forest community regeneration. Although dense understory dwarf bamboo has been considered to have serious negative effects on the regeneration of forest community species, little attention has been paid to the relationship between dwarf bamboo and seed retention. In a field experiment we manipulated the density of Fargesia decurvata, a common understory dwarf bamboo, to investigate the retention of seeds from five canopy tree species in an evergreen and deciduous broad-leaved mixed forest in Jinfoshan National Nature Reserve, SW China. We found that the median survival time and retention ratio of seeds increased with the increase in bamboo density. Fauna discriminately altered seed retention in bamboo groves of different densities. Arthropods reduced seed survival the most, and seeds removed decreased with increasing bamboo density. Birds removed or ate more seeds in groves of medium bamboo density and consumed fewer seeds in dense or sparse bamboo habitats. Rodents removed a greater number of large and highly profitable seeds in dense bamboo groves but more small and thin-husked seeds in sparse bamboo groves. Seed characteristics, including seed size, seed mass and seed profitability, were important factors affecting seed retention. The results suggested that dense understory dwarf bamboo not only increased seeds concealment and reduced the probability and speed of seed removal but also influenced the trade-off between predation and risk of animal predatory strategies, thereby impacting the quantity and composition of surviving seeds. Our results also indicated that dense understory dwarf bamboo and various seed characteristics can provide good opportunities for seed storage and seed germination and has a potential positive effect on canopy tree regeneration.

Screening in dense ionic fluids

International Nuclear Information System (INIS)

Tosi, M.P.

1991-01-01

There has been great progress in recent years in determining and understanding the structure of molten salts. I focus on molten alkali halides and discuss two main points concerning their liquid structure and its relationship with static electrical response in these dense ionic conductors. These are (i) the nature of screening and the related definitions and properties of the screening length and of the dielectric function, and (ii) developments in integral equations techniques for the evaluation of molten salt structure and static screening from given pair potentials. (author). 26 refs, 3 figs, 2 tabs

Fabricating Superior NiAl Bronze Components through Wire Arc Additive Manufacturing

Directory of Open Access Journals (Sweden)

Donghong Ding

2016-08-01

Full Text Available Cast nickel aluminum bronze (NAB alloy is widely used for large engineering components in marine applications due to its excellent mechanical properties and corrosion resistance. Casting porosity, as well as coarse microstructure, however, are accompanied by a decrease in mechanical properties of cast NAB components. Although heat treatment, friction stir processing, and fusion welding were implemented to eliminate porosity, improve mechanical properties, and refine the microstructure of as-cast metal, their applications are limited to either surface modification or component repair. Instead of traditional casting techniques, this study focuses on developing NAB components using recently expanded wire arc additive manufacturing (WAAM. Consumable welding wire is melted and deposited layer-by-layer on substrates producing near-net shaped NAB components. Additively-manufactured NAB components without post-processing are fully dense, and exhibit fine microstructure, as well as comparable mechanical properties, to as-cast NAB alloy. The effects of heat input from the welding process and post-weld-heat-treatment (PWHT are shown to give uniform NAB alloys with superior mechanical properties revealing potential marine applications of the WAAM technique in NAB production.

The EARP Complex and Its Interactor EIPR-1 Are Required for Cargo Sorting to Dense-Core Vesicles.

Directory of Open Access Journals (Sweden)

Irini Topalidou

2016-05-01

Full Text Available The dense-core vesicle is a secretory organelle that mediates the regulated release of peptide hormones, growth factors, and biogenic amines. Dense-core vesicles originate from the trans-Golgi of neurons and neuroendocrine cells, but it is unclear how this specialized organelle is formed and acquires its specific cargos. To identify proteins that act in dense-core vesicle biogenesis, we performed a forward genetic screen in Caenorhabditis elegans for mutants defective in dense-core vesicle function. We previously reported the identification of two conserved proteins that interact with the small GTPase RAB-2 to control normal dense-core vesicle cargo-sorting. Here we identify several additional conserved factors important for dense-core vesicle cargo sorting: the WD40 domain protein EIPR-1 and the endosome-associated recycling protein (EARP complex. By assaying behavior and the trafficking of dense-core vesicle cargos, we show that mutants that lack EIPR-1 or EARP have defects in dense-core vesicle cargo-sorting similar to those of mutants in the RAB-2 pathway. Genetic epistasis data indicate that RAB-2, EIPR-1 and EARP function in a common pathway. In addition, using a proteomic approach in rat insulinoma cells, we show that EIPR-1 physically interacts with the EARP complex. Our data suggest that EIPR-1 is a new interactor of the EARP complex and that dense-core vesicle cargo sorting depends on the EARP-dependent trafficking of cargo through an endosomal sorting compartment.

Branchial Cilia and Sperm Flagella Recruit Distinct Axonemal Components

Science.gov (United States)

Konno, Alu; Shiba, Kogiku; Cai, Chunhua; Inaba, Kazuo

2015-01-01

Eukaryotic cilia and flagella have highly conserved 9 + 2 structures. They are functionally diverged to play cell-type-specific roles even in a multicellular organism. Although their structural components are therefore believed to be common, few studies have investigated the molecular diversity of the protein components of the cilia and flagella in a single organism. Here we carried out a proteomic analysis and compared protein components between branchial cilia and sperm flagella in a marine invertebrate chordate, Ciona intestinalis. Distinct feature of protein recruitment in branchial cilia and sperm flagella has been clarified; (1) Isoforms of α- and β-tubulins as well as those of actins are distinctly used in branchial cilia or sperm flagella. (2) Structural components, such as dynein docking complex, tektins and an outer dense fiber protein, are used differently by the cilia and flagella. (3) Sperm flagella are specialized for the cAMP- and Ca2+-dependent regulation of outer arm dynein and for energy metabolism by glycolytic enzymes. Our present study clearly demonstrates that flagellar or ciliary proteins are properly recruited according to their function and stability, despite their apparent structural resemblance and conservation. PMID:25962172

Transmission of epi-alleles with MET1-dependent dense methylation in Arabidopsis thaliana.

Directory of Open Access Journals (Sweden)

Michael Watson

Full Text Available DNA methylation in plants targets cytosines in three sequence contexts, CG, CHG and CHH (H representing A, C or T. Each of these patterns has traditionally been associated with distinct DNA methylation pathways with CHH methylation being controlled by the RNA dependent DNA methylation (RdDM pathway employing small RNAs as a guide for the de novo DOMAINS REARRANGED METHYLTRANSFERASE (DRM2, and maintenance DNA METHYLTRANSFERASE1 (MET1 being responsible for faithful propagation of CG methylation. Here we report an unusual 'dense methylation' pattern under the control of MET1, with methylation in all three sequence contexts. We identified epi-alleles of dense methylation at a non coding RNA locus (At4g15242 in Arabidopsis ecotypes, with distinct dense methylation and expression characteristics, which are stably maintained and transmitted in genetic crosses and which can be heritably altered by depletion of MET1. This suggests that, in addition to its classical CG maintenance function, at certain loci MET1 plays a role in creating transcriptional diversity based on the generation of independent epi-alleles. Database inspection identified several other loci with MET1-dependent dense methylation patterns. Arabidopsis ecotypes contain distinct epi-alleles of these loci with expression patterns that inversely correlate with methylation density, predominantly within the transcribed region. In Arabidopsis, dense methylation appears to be an exception as it is only found at a small number of loci. Its presence does, however, highlight the potential for MET1 as a contributor to epigenetic diversity, and it will be interesting to investigate the representation of dense methylation in other plant species.

Formation of fibrous materials from dense caseinate dispersions

NARCIS (Netherlands)

Manski, J.M.; Goot, van der A.J.; Boom, R.M.

2007-01-01

Application of shear and cross-linking enzyme transglutaminase (Tgase) induced fibrous hierarchical structures in dense (30% w/w) calcium caseinate (Ca-caseinate) dispersions. Using Tgase was essential for the anisotropic structure formation. The fibrous materials showed anisotropy on both micro-

X-ray Thomson scattering in warm dense matter at low frequencies

International Nuclear Information System (INIS)

Murillo, Michael S.

2010-01-01

The low-frequency portion of the x-ray Thomson scattering spectrum is determined by electrons that follow the slow ion motion. This ion motion is characterized by the ion-ion dynamic structure factor, which contains a wealth of information about the ions, including structure and collective modes. The frequency-integrated (diffraction) contribution is considered first. An effective dressed-particle description of warm dense matter is derived from the quantum Ornstein-Zernike equations, and this is used to identify a Yukawa model for warm dense matter. The efficacy of this approach is validated by comparing a predicted structure with data from the extreme case of a liquid metal; good agreement is found. A Thomas-Fermi model is then introduced to allow the separation of bound and free states at finite temperatures, and issues with the definition of the ionization state in warm dense matter are discussed. For applications, analytic structure factors are given on either side of the Kirkwood line. Finally, several models are constructed for describing the slow dynamics of warm dense matter. Two classes of models are introduced that both satisfy the basic sum rules. One class of models is the 'plasmon-pole'-like class, which yields the dispersion of ion-acoustic waves. Damping is then included via generalized hydrodynamics models that incorporate viscous contributions.

Evolution of dense spatially modulated electron bunches

Science.gov (United States)

Balal, N.; Bratman, V. L.; Friedman, A.

2018-03-01

An analytical theory describing the dynamics of relativistic moving 1D electron pulses (layers) with the density modulation affected by a space charge has been revised and generalized for its application to the formation of dense picosecond bunches from linear accelerators with laser-driven photo injectors, and its good agreement with General Particle Tracer simulations has been demonstrated. Evolution of quasi-one-dimensional bunches (disks), for which the derived formulas predict longitudinal expansion, is compared with that for thin and long electron cylinders (threads), for which the excitation of non-linear waves with density spikes was found earlier by Musumeci et al. [Phys. Rev. Lett. 106(18), 184801 (2011)] and Musumeci et al. [Phys. Rev. Spec. Top. -Accel. Beams 16(10), 100701 (2013)]. Both types of bunches can be used for efficiency enhancement of THz sources based on the Doppler frequency up-shifted coherent spontaneous radiation of electrons. Despite the strong Coulomb repulsion, the periodicity of a preliminary modulation in dense 1D layers persists during their expansion in the most interesting case of a relatively small change in particle energy. However, the period of modulation increases and its amplitude decreases in time. In the case of a large change in electron energy, the uniformity of periodicity is broken due to different relativistic changes in longitudinal scales along the bunch: the "period" of modulation decreases and its amplitude increases from the rear to the front boundary. Nevertheless, the use of relatively long electron bunches with a proper preliminary spatial modulation of density can provide a significantly higher power and a narrower spectrum of coherent spontaneous radiation of dense bunches than in the case of initially short single bunches with the same charge.

Accelerated two-dimensional cine DENSE cardiovascular magnetic resonance using compressed sensing and parallel imaging.

Science.gov (United States)

Chen, Xiao; Yang, Yang; Cai, Xiaoying; Auger, Daniel A; Meyer, Craig H; Salerno, Michael; Epstein, Frederick H

2016-06-14

Cine Displacement Encoding with Stimulated Echoes (DENSE) provides accurate quantitative imaging of cardiac mechanics with rapid displacement and strain analysis; however, image acquisition times are relatively long. Compressed sensing (CS) with parallel imaging (PI) can generally provide high-quality images recovered from data sampled below the Nyquist rate. The purposes of the present study were to develop CS-PI-accelerated acquisition and reconstruction methods for cine DENSE, to assess their accuracy for cardiac imaging using retrospective undersampling, and to demonstrate their feasibility for prospectively-accelerated 2D cine DENSE imaging in a single breathhold. An accelerated cine DENSE sequence with variable-density spiral k-space sampling and golden angle rotations through time was implemented. A CS method, Block LOw-rank Sparsity with Motion-guidance (BLOSM), was combined with sensitivity encoding (SENSE) for the reconstruction of under-sampled multi-coil spiral data. Seven healthy volunteers and 7 patients underwent 2D cine DENSE imaging with fully-sampled acquisitions (14-26 heartbeats in duration) and with prospectively rate-2 and rate-4 accelerated acquisitions (14 and 8 heartbeats in duration). Retrospectively- and prospectively-accelerated data were reconstructed using BLOSM-SENSE and SENSE. Image quality of retrospectively-undersampled data was quantified using the relative root mean square error (rRMSE). Myocardial displacement and circumferential strain were computed for functional assessment, and linear correlation and Bland-Altman analyses were used to compare accelerated acquisitions to fully-sampled reference datasets. For retrospectively-undersampled data, BLOSM-SENSE provided similar or lower rRMSE at rate-2 and lower rRMSE at rate-4 acceleration compared to SENSE (p cine DENSE provided good image quality and expected values of displacement and strain. BLOSM-SENSE-accelerated spiral cine DENSE imaging with 2D displacement encoding can be

Obtaining of dense and highly porous ceramic materials from metallurgical slag

OpenAIRE

Fidancevska E.; Mangutova B.; Milosevski D.; Milosevski M.; Bossert J.

2003-01-01

Glass-ceramics in a dense and highly porous form can be obtained from metallurgical slag and waste glass of TV monitors. Using polyurethane foam as pore creator, a highly porous system with porosity of 65 ± 5 %, E-modulus and flexural strength of 8 ± 3 GPa and 13 ± 3.5 MPa respectively can be obtained. This porous material had durability (mass loss) of 0.03 % in 0.1 M HCl that is identical with the durability of a dense composite.

Uncountably many maximizing measures for a dense subset of continuous functions

Science.gov (United States)

Shinoda, Mao

2018-05-01

Ergodic optimization aims to single out dynamically invariant Borel probability measures which maximize the integral of a given ‘performance’ function. For a continuous self-map of a compact metric space and a dense set of continuous functions, we show the existence of uncountably many ergodic maximizing measures. We also show that, for a topologically mixing subshift of finite type and a dense set of continuous functions there exist uncountably many ergodic maximizing measures with full support and positive entropy.

Densely Aligned Graphene Nanoribbon Arrays and Bandgap Engineering

Energy Technology Data Exchange (ETDEWEB)

Su, Justin [Stanford Univ., CA (United States); Chen, Changxin [Stanford Univ., CA (United States); Gong, Ming [Stanford Univ., CA (United States); Kenney, Michael [Stanford Univ., CA (United States)

2017-01-04

Graphene has attracted great interest for future electronics due to its high mobility and high thermal conductivity. However, a two-dimensional graphene sheet behaves like a metal, lacking a bandgap needed for the key devices components such as field effect transistors (FETs) in digital electronics. It has been shown that, partly due to quantum confinement, graphene nanoribbons (GNRs) with ~2 nm width can open up sufficient bandgaps and evolve into semiconductors to exhibit high on/off ratios useful for FETs. However, a challenging problem has been that, such ultra-narrow GNRs (~2 nm) are difficult to fabricate, especially for GNRs with smooth edges throughout the ribbon length. Despite high on/off ratios, these GNRs show very low mobility and low on-state conductance due to dominant scattering effects by imperfections and disorders at the edges. Wider GNRs (>5 nm) show higher mobility, higher conductance but smaller bandgaps and low on/off ratios undesirable for FET applications. It is highly desirable to open up bandgaps in graphene or increase the bandgaps in wide GNRs to afford graphene based semiconductors for high performance (high on-state current and high on/off ratio) electronics. Large scale ordering and dense packing of such GNRs in parallel are also needed for device integration but have also been challenging thus far. It has been shown theoretically that uniaxial strains can be applied to a GNR to engineer its bandgap. The underlying physics is that under uniaxial strain, the Dirac point moves due to stretched C-C bonds, leading to an increase in the bandgap of armchair GNRs by up to 50% of its original bandgap (i.e. bandgap at zero strain). For zigzag GNRs, due to the existence of the edge states, changes of bandgap are smaller under uniaxial strain and can be increased by ~30%. This work proposes a novel approach to the fabrication of densely aligned graphene nanoribbons with highly smooth edges afforded by anisotropic etching and uniaxial strain for

Active and Nonlinear Microrheology of Dense Colloidal Suspensions

OpenAIRE

Harrer, Christian Josef

2013-01-01

In this work, we have investigated active and nonlinear microrheology of dense colloidal suspensions, i.e., the forced motion of a singled-out tracer particle by an external force, both in the framework of MCT and via event-driven Brownian Dynamics simulations.

Generation of dense plume fingers in saturated-unsaturated homogeneous porous media

Science.gov (United States)

Cremer, Clemens J. M.; Graf, Thomas

2015-02-01

Flow under variable-density conditions is widespread, occurring in geothermal reservoirs, at waste disposal sites or due to saltwater intrusion. The migration of dense plumes typically results in the formation of vertical plume fingers which are known to be triggered by material heterogeneity or by variations in source concentration that causes the density variation. Using a numerical groundwater model, six perturbation methods are tested under saturated and unsaturated flow conditions to mimic heterogeneity and concentration variations on the pore scale in order to realistically generate dense fingers. A laboratory-scale sand tank experiment is numerically simulated, and the perturbation methods are evaluated by comparing plume fingers obtained from the laboratory experiment with numerically simulated fingers. Dense plume fingering for saturated flow can best be reproduced with a spatially random, time-constant perturbation of the solute source. For unsaturated flow, a spatially and temporally random noise of solute concentration or a random conductivity field adequately simulate plume fingering.

Integration of prior knowledge into dense image matching for video surveillance

Science.gov (United States)

Menze, M.; Heipke, C.

2014-08-01

Three-dimensional information from dense image matching is a valuable input for a broad range of vision applications. While reliable approaches exist for dedicated stereo setups they do not easily generalize to more challenging camera configurations. In the context of video surveillance the typically large spatial extent of the region of interest and repetitive structures in the scene render the application of dense image matching a challenging task. In this paper we present an approach that derives strong prior knowledge from a planar approximation of the scene. This information is integrated into a graph-cut based image matching framework that treats the assignment of optimal disparity values as a labelling task. Introducing the planar prior heavily reduces ambiguities together with the search space and increases computational efficiency. The results provide a proof of concept of the proposed approach. It allows the reconstruction of dense point clouds in more general surveillance camera setups with wider stereo baselines.

Multi-scaling of the dense plasma focus

Science.gov (United States)

Saw, S. H.; Lee, S.

2015-03-01

The dense plasma focus is a copious source of multi-radiations with many potential new applications of special interest such as in advanced SXR lithography, materials synthesizing and testing, medical isotopes and imaging. This paper reviews the series of numerical experiments conducted using the Lee model code to obtain the scaling laws of the multi-radiations.

Projective block Lanczos algorithm for dense, Hermitian eigensystems

International Nuclear Information System (INIS)

Webster, F.; Lo, G.C.

1996-01-01

Projection operators are used to effect open-quotes deflation by restrictionclose quotes and it is argued that this is an optimal Lanczos algorithm for memory minimization. Algorithmic optimization is constrained to dense, Hermitian eigensystems where a significant number of the extreme eigenvectors must be obtained reliably and completely. The defining constraints are operator algebra without a matrix representation and semi-orthogonalization without storage of Krylov vectors. other semi-orthogonalization strategies for Lanczos algorithms and conjugate gradient techniques are evaluated within these constraints. Large scale, sparse, complex numerical experiments are performed on clusters of magnetic dipoles, a quantum many-body system that is not block-diagonalizable. Plane-wave, density functional theory of beryllium clusters provides examples of dense complex eigensystems. Use of preconditioners and spectral transformations is evaluated in a preprocessor prior to a high accuracy self-consistent field calculation. 25 refs., 3 figs., 5 tabs

Short intense ion pulses for materials and warm dense matter research

Energy Technology Data Exchange (ETDEWEB)

Seidl, Peter A., E-mail: PASeidl@lbl.gov [Lawrence Berkeley National Laboratory, Berkeley, CA (United States); Persaud, Arun; Waldron, William L. [Lawrence Berkeley National Laboratory, Berkeley, CA (United States); Barnard, John J. [Lawrence Livermore National Laboratory, Livermore, CA (United States); Davidson, Ronald C. [Princeton Plasma Physics Laboratory, Princeton, NJ (United States); Friedman, Alex [Lawrence Livermore National Laboratory, Livermore, CA (United States); Gilson, Erik P. [Princeton Plasma Physics Laboratory, Princeton, NJ (United States); Greenway, Wayne G. [Lawrence Berkeley National Laboratory, Berkeley, CA (United States); Grote, David P. [Lawrence Livermore National Laboratory, Livermore, CA (United States); Kaganovich, Igor D. [Princeton Plasma Physics Laboratory, Princeton, NJ (United States); Lidia, Steven M.; Stettler, Matthew; Takakuwa, Jeffrey H.; Schenkel, Thomas [Lawrence Berkeley National Laboratory, Berkeley, CA (United States)

2015-11-11

We have commenced experiments with intense short pulses of ion beams on the Neutralized Drift Compression Experiment-II at Lawrence Berkeley National Laboratory, by generating beam spots size with radius r<1 mm within 2 ns FWHM and approximately 10{sup 10} ions/pulse. To enable the short pulse durations and mm-scale focal spot radii, the 1.2 MeV Li{sup +} ion beam is neutralized in a 1.6-meter drift compression section located after the last accelerator magnet. An 8-Tesla short focal length solenoid compresses the beam in the presence of the large volume plasma near the end of this section before the target. The scientific topics to be explored are warm dense matter, the dynamics of radiation damage in materials, and intense beam and beam-plasma physics including selected topics of relevance to the development of heavy-ion drivers for inertial fusion energy. Here we describe the accelerator commissioning and time-resolved ionoluminescence measurements of yttrium aluminum perovskite using the fully integrated accelerator and neutralized drift compression components.

Short intense ion pulses for materials and warm dense matter research

International Nuclear Information System (INIS)

Seidl, Peter A.; Persaud, Arun; Waldron, William L.; Barnard, John J.; Davidson, Ronald C.; Friedman, Alex; Gilson, Erik P.; Greenway, Wayne G.; Grote, David P.; Kaganovich, Igor D.; Lidia, Steven M.; Stettler, Matthew; Takakuwa, Jeffrey H.; Schenkel, Thomas

2015-01-01

We have commenced experiments with intense short pulses of ion beams on the Neutralized Drift Compression Experiment-II at Lawrence Berkeley National Laboratory, by generating beam spots size with radius r<1 mm within 2 ns FWHM and approximately 10"1"0 ions/pulse. To enable the short pulse durations and mm-scale focal spot radii, the 1.2 MeV Li"+ ion beam is neutralized in a 1.6-meter drift compression section located after the last accelerator magnet. An 8-Tesla short focal length solenoid compresses the beam in the presence of the large volume plasma near the end of this section before the target. The scientific topics to be explored are warm dense matter, the dynamics of radiation damage in materials, and intense beam and beam-plasma physics including selected topics of relevance to the development of heavy-ion drivers for inertial fusion energy. Here we describe the accelerator commissioning and time-resolved ionoluminescence measurements of yttrium aluminum perovskite using the fully integrated accelerator and neutralized drift compression components.

Obtaining of dense and highly porous ceramic materials from metallurgical slag

Directory of Open Access Journals (Sweden)

Fidancevska E.

2003-01-01

Full Text Available Glass-ceramics in a dense and highly porous form can be obtained from metallurgical slag and waste glass of TV monitors. Using polyurethane foam as pore creator, a highly porous system with porosity of 65 ± 5 %, E-modulus and flexural strength of 8 ± 3 GPa and 13 ± 3.5 MPa respectively can be obtained. This porous material had durability (mass loss of 0.03 % in 0.1 M HCl that is identical with the durability of a dense composite.

Gas-particle interactions in dense gas-fluidised beds

NARCIS (Netherlands)

Li, J.; Kuipers, J.A.M.

2003-01-01

The occurrence of heterogeneous flow structures in gas-particle flows seriously affects gas¿solid contacting and transport processes in dense gas-fluidized beds. A computational study, using a discrete particle method based on Molecular Dynamics techniques, has been carried out to explore the

Locating sources within a dense sensor array using graph clustering

Science.gov (United States)

Gerstoft, P.; Riahi, N.

2017-12-01

We develop a model-free technique to identify weak sources within dense sensor arrays using graph clustering. No knowledge about the propagation medium is needed except that signal strengths decay to insignificant levels within a scale that is shorter than the aperture. We then reinterpret the spatial coherence matrix of a wave field as a matrix whose support is a connectivity matrix of a graph with sensors as vertices. In a dense network, well-separated sources induce clusters in this graph. The geographic spread of these clusters can serve to localize the sources. The support of the covariance matrix is estimated from limited-time data using a hypothesis test with a robust phase-only coherence test statistic combined with a physical distance criterion. The latter criterion ensures graph sparsity and thus prevents clusters from forming by chance. We verify the approach and quantify its reliability on a simulated dataset. The method is then applied to data from a dense 5200 element geophone array that blanketed of the city of Long Beach (CA). The analysis exposes a helicopter traversing the array and oil production facilities.

Processes in a dense long-pulse electron beam focused on a solid target

Energy Technology Data Exchange (ETDEWEB)

Arkhipov, A V; Sominskij, G G [St. Petersburg Technical Univ. (Russian Federation)

1997-12-31

The results obtained in beam-target experiments with dense medium-energy electron beam in the regime of long single pulses are presented. The measured power density of the focused beam at the target reached 20 MW/cm{sup 2} in these experiments. The processes caused by dense flows of secondary particles and by a dense target ablation plasma were studied in detail. Substantial target shielding occurs when the energy density at the target exceeds the value of about 1 kJ/cm{sup 2}. The target plasma and the sputtered matter that is responsible for shielding affects also the beam structure, as well as the target etching rates. (J.U.). 3 figs., 5 refs.

Processes in a dense long-pulse electron beam focused on a solid target

International Nuclear Information System (INIS)

Arkhipov, A.V.; Sominskij, G.G.

1996-01-01

The results obtained in beam-target experiments with dense medium-energy electron beam in the regime of long single pulses are presented. The measured power density of the focused beam at the target reached 20 MW/cm 2 in these experiments. The processes caused by dense flows of secondary particles and by a dense target ablation plasma were studied in detail. Substantial target shielding occurs when the energy density at the target exceeds the value of about 1 kJ/cm 2 . The target plasma and the sputtered matter that is responsible for shielding affects also the beam structure, as well as the target etching rates. (J.U.). 3 figs., 5 refs

Magnetic fields and dense chromospheres in dMe stars

International Nuclear Information System (INIS)

Mullan, D.J.

1975-01-01

We examine in a semi-quantitative fashion the hypothesis that dense chromospheres of dMe stars are heated by dissipation of hydromagnetic waves. We propose that dMe stars are a set of magnetic stars on the lower main sequence, with strong fields presumably generated by dynamo action in deep convective envelopes. We discuss how the combination of magnetic fields and dense chromospheres in dMe stars provides a consistent interpretation of the following features: 1) The dMe stars which are most likely to be flares stars are those with hydrogen lines in emission. However, it is proposed that in certain conditions, Balmer lines may appear in absorption, and we suggest that 'negative flares' can be explained at least in part by the occurrence of strong absorption in Hα. 2) The propagation of flare-initiated coronal waves can trigger sympathetic stellar flares. 3) Apart from flare activity, emission line strengths in dMe stars must exhibit time variations due to the emergence of new magnetic flux ropes through the stellar surface. 4) The combination of strong magnetic fields with dense chromospheres makes the Faraday rotation measure large enough to have potentially a detectable effect on polarized visible light. 5) It is suggested that grain formation occurs in starspots on dMe stars. (orig./WL) [de

On parametrised cold dense matter equation of state inference

Science.gov (United States)

Riley, Thomas E.; Raaijmakers, Geert; Watts, Anna L.

2018-04-01

Constraining the equation of state of cold dense matter in compact stars is a major science goal for observing programmes being conducted using X-ray, radio, and gravitational wave telescopes. We discuss Bayesian hierarchical inference of parametrised dense matter equations of state. In particular we generalise and examine two inference paradigms from the literature: (i) direct posterior equation of state parameter estimation, conditioned on observations of a set of rotating compact stars; and (ii) indirect parameter estimation, via transformation of an intermediary joint posterior distribution of exterior spacetime parameters (such as gravitational masses and coordinate equatorial radii). We conclude that the former paradigm is not only tractable for large-scale analyses, but is principled and flexible from a Bayesian perspective whilst the latter paradigm is not. The thematic problem of Bayesian prior definition emerges as the crux of the difference between these paradigms. The second paradigm should in general only be considered as an ill-defined approach to the problem of utilising archival posterior constraints on exterior spacetime parameters; we advocate for an alternative approach whereby such information is repurposed as an approximative likelihood function. We also discuss why conditioning on a piecewise-polytropic equation of state model - currently standard in the field of dense matter study - can easily violate conditions required for transformation of a probability density distribution between spaces of exterior (spacetime) and interior (source matter) parameters.

Time resolved x-ray photography of a dense plasma focus

International Nuclear Information System (INIS)

Burnett, J.C.; Meyer, J.; Rankin, G.

1977-01-01

The temporal development of the hot plasma in a dense plasma focus is studied by x-ray streak photography of approximately 2 ns resolution time. It is shown that initially a uniform x-ray emitting pinch plasma is formed which subsequently cools down until x-ray emission stops after approximately 50 ns. At a time of around 100 ns after initial x-ray emission coinciding with the break-up time of the pinch a second burst of x-rays is observed coming from small localized regions. The observations are compared with results obtained from time-resolved shadow and schlieren photography of a similar dense focus discharge. (author)

Excitation of hydrogen atom by ultrashort laser pulses in optically dense plasma

Energy Technology Data Exchange (ETDEWEB)

Calisti, A. [Aix Marseille Universite, CNRS, PIIM, Marseille (France); Astapenko, V.A. [Moscow Institute of Physics and Technology, Dolgoprudnyi (Russian Federation); Lisitsa, V.S. [Moscow Institute of Physics and Technology, Dolgoprudnyi (Russian Federation); Russian Research Center ' ' Kurchatov Institute' ' , Moscow (Russian Federation); National Research Nuclear University MEPhI, Moscow (Russian Federation)

2017-10-15

The features of excitation of a hydrogen atom by ultrashort laser pulses (USP) with a Gaussian envelope in optically dense plasma at a Lyman-beta transition are studied theoretically. The problem is of interest for diagnostics of optically dense media. USP have two doubtless advantages over conventional laser excitation: (a) the USP carrier frequency is shifted to the region of short wavelengths allowing exciting atoms from the ground state and (b) the wide spectrum of USP allows them to penetrate into optically dense media to much longer distances as compared with monochromatic radiation. As actual realistic cases, two examples are considered: hot rarefied plasma (the coronal limit) and dense cold plasma (the Boltzmann equilibrium). Universal expressions for the total probability of excitation of the transition under consideration are obtained in view of absorption of radiation in a medium. As initial data for the spectral form of a line, the results of calculations by methods of molecular dynamics are used. The probability of excitation of an atom is analysed for different values of problem parameters: the pulse duration, the optical thickness of a medium, and the detuning of the pulse carrier frequency from the eigenfrequency of an electron transition. (copyright 2017 WILEY-VCH Verlag GmbH and Co. KGaA, Weinheim)

A continuous stochastic model for non-equilibrium dense gases

Science.gov (United States)

Sadr, M.; Gorji, M. H.

2017-12-01

While accurate simulations of dense gas flows far from the equilibrium can be achieved by direct simulation adapted to the Enskog equation, the significant computational demand required for collisions appears as a major constraint. In order to cope with that, an efficient yet accurate solution algorithm based on the Fokker-Planck approximation of the Enskog equation is devised in this paper; the approximation is very much associated with the Fokker-Planck model derived from the Boltzmann equation by Jenny et al. ["A solution algorithm for the fluid dynamic equations based on a stochastic model for molecular motion," J. Comput. Phys. 229, 1077-1098 (2010)] and Gorji et al. ["Fokker-Planck model for computational studies of monatomic rarefied gas flows," J. Fluid Mech. 680, 574-601 (2011)]. The idea behind these Fokker-Planck descriptions is to project the dynamics of discrete collisions implied by the molecular encounters into a set of continuous Markovian processes subject to the drift and diffusion. Thereby, the evolution of particles representing the governing stochastic process becomes independent from each other and thus very efficient numerical schemes can be constructed. By close inspection of the Enskog operator, it is observed that the dense gas effects contribute further to the advection of molecular quantities. That motivates a modelling approach where the dense gas corrections can be cast in the extra advection of particles. Therefore, the corresponding Fokker-Planck approximation is derived such that the evolution in the physical space accounts for the dense effects present in the pressure, stress tensor, and heat fluxes. Hence the consistency between the devised Fokker-Planck approximation and the Enskog operator is shown for the velocity moments up to the heat fluxes. For validation studies, a homogeneous gas inside a box besides Fourier, Couette, and lid-driven cavity flow setups is considered. The results based on the Fokker-Planck model are

Energy Flow in Dense Off-Equilibrium Plasma

Science.gov (United States)

2016-07-15

brings the electron density and light emission into LTE at the measured spectral temperature while leaving the ions cold. Because of their large mass... measurements of ionization potential lowering and collision times indense plasmas, allowing us to distinguish between competing dense-plasma models...Hydrodynamic analysis of shockwaves generated by sparks yielded similar measurements ina different, more accessible system. Ultra-fast observations

Light localization in cold and dense atomic ensemble

International Nuclear Information System (INIS)

Sokolov, Igor

2017-01-01

We report on results of theoretical analysis of possibilities of light strong (Anderson) localization in a cold atomic ensemble. We predict appearance of localization in dense atomic systems in strong magnetic field. We prove that in absence of the field the light localization is impossible. (paper)

Synthesis and characterization of dense membranes of silk fibroin with glycerin

International Nuclear Information System (INIS)

Silva, Mariana F.; Moraes, Mariana A. de; Weska, Raquel F.; Nogueira, Grinia M.; Beppu, Marisa M.

2009-01-01

The addition of plasticizers seeks improvements in mechanical properties of dense membranes of silk fibroin with possible interactions by hydrogen bonds. The aim of the present study was to produce and characterize dense membranes of silk fibroin containing glycerin in two different concentrations. The characterization of the membranes was performed from scanning electron microscopy (SEM), mechanical traction tests, infrared spectroscopy (FTIR-ATR) and X-ray diffraction (XRD). The results indicated that the addition of glycerin allowed obtaining homogeneous and more crystalline membranes and improved their properties of elongation. (author)

Equation of state of partially-ionized dense plasmas

International Nuclear Information System (INIS)

Rogers, F.J.

1989-01-01

This paper describes methods for calculating the equation of state of partially-ionized dense plasmas. The term dense plasma is used rather than strongly coupled plasma, since it is possible that at plasma conditions such that only a few levels can be observed spectroscopically the plasma coupling parameters are not large. Due mainly to their importance in theoretical astrophysics, the properties of partially ionized plasmas have been of interest for a long while. More recently, this interest has intensified due to the development of methods for producing partially ionized plasmas in the laboratory. This has opened up large programs of experimental investigation and of practical application. In this paper we consider detailed statistical mechanical methods that explicitly treat the distribution over ionic species and their energy level structure. These detailed approaches are generally characterized as being in the ''chemical picture'' when a free energy expression is minimized or in the ''physical picture'' when the starting point is the grand canonical ensemble. 52 refs., 2 tabs

Dynamic conductivity and partial ionization in dense fluid hydrogen

Science.gov (United States)

Zaghoo, Mohamed

2018-04-01

A theoretical description for optical conduction experiments in dense fluid hydrogen is presented. Different quantum statistical approaches are used to describe the mechanism of electronic transport in hydrogen's high-temperature dense phase. We show that at the onset of the metallic transition, optical conduction could be described by a strong rise in atomic polarizability, due to increased ionization, whereas in the highly degenerate limit, the Ziman weak scattering model better accounts for the observed saturation of reflectance. The inclusion of effects of partial ionization in the highly degenerate region provides great agreement with experimental results. Hydrogen's fluid metallic state is revealed to be a partially ionized free-electron plasma. Our results provide some of the first theoretical transport models that are experimentally benchmarked, as well as an important guide for future studies.

Testing the universality of the star-formation efficiency in dense molecular gas

Science.gov (United States)

Shimajiri, Y.; André, Ph.; Braine, J.; Könyves, V.; Schneider, N.; Bontemps, S.; Ladjelate, B.; Roy, A.; Gao, Y.; Chen, H.

2017-08-01

Context. Recent studies with, for example, Spitzer and Herschel have suggested that star formation in dense molecular gas may be governed by essentially the same "law" in Galactic clouds and external galaxies. This conclusion remains controversial, however, in large part because different tracers have been used to probe the mass of dense molecular gas in Galactic and extragalactic studies. Aims: We aimed to calibrate the HCN and HCO+ lines commonly used as dense gas tracers in extragalactic studies and to test the possible universality of the star-formation efficiency in dense gas (≳104 cm-3), SFEdense. Methods: We conducted wide-field mapping of the Aquila, Ophiuchus, and Orion B clouds at 0.04 pc resolution in the J = 1 - 0 transition of HCN, HCO+, and their isotopomers. For each cloud, we derived a reference estimate of the dense gas mass MHerschelAV > 8, as well as the strength of the local far-ultraviolet (FUV) radiation field, using Herschel Gould Belt survey data products, and estimated the star-formation rate from direct counting of the number of Spitzer young stellar objects. Results: The H13CO+(1-0) and H13CN(1-0) lines were observed to be good tracers of the dense star-forming filaments detected with Herschel. Comparing the luminosities LHCN and LHCO+ measured in the HCN and HCO+ lines with the reference masses MHerschelAV > 8, the empirical conversion factors αHerschel - HCN (=MHerschelAV > 8/LHCN) and αHerschel - HCO+ (=MHerschelAV > 8/LHCO+) were found to be significantly anti-correlated with the local FUV strength. In agreement with a recent independent study of Orion B by Pety et al., the HCN and HCO+ lines were found to trace gas down to AV ≳ 2. As a result, published extragalactic HCN studies must be tracing all of the moderate density gas down to nH2 ≲ 103 cm-3. Estimating the contribution of this moderate density gas from the typical column density probability distribution functions in nearby clouds, we obtained the following G0

Phase control of higher spectral components in the presence of a static electric field

International Nuclear Information System (INIS)

Zhang Chaojin; Yang Weifeng; Song Xiaohong; Xu Zhizhan

2009-01-01

We investigate the higher spectral component generations driven by a few-cycle laser pulse in a dense medium when a static electric field is present. Our results show that, when assisted by a static electric field, the dependence of the transmitted laser spectrum on the carrier-envelope phase (CEP) is significantly increased. Continuum and distinct peaks can be achieved by controlling the CEP of the few-cycle ultrashort laser pulse. Such a strong variation is due to the fact that the presence of the static electric field modifies the waveform of the combined electric field, which further affects the spectral distribution of the generated higher spectral components.

Mechanics of dense suspensions in turbulent channel flows

NARCIS (Netherlands)

Picano, F.; Costa, P.; Breugem, W.P.; Brandt, L.

2015-01-01

Dense suspensions are usually investigated in the laminar limit where inertial effects are insignificant. When the flow rate is high enough, i.e. at high Reynolds number, the flow may become turbulent and the interaction between solid and liquid phases modifies the turbulence we know in single-phase

Cold dense baryonic matter and compact stars

International Nuclear Information System (INIS)

Hyun Kyu Lee; Sang-Jin Sin; Mannque Rho

2011-01-01

Probing dense hadronic matter is thus far an uncharted field of physics. Here we give a brief summary of the highlights of what has been so far accomplished and what will be done in the years ahead by the World Class University III Project at Hanyang University in the endeavor to unravel and elucidate the multi-facet of the cold dense baryonic matter existing in the interior of the densest visible stable object in the universe, i.e. neutron stars, strangeness stars and/or quark stars, from a modest and simplified starting point of an effective field theory modeled on the premise of QCD as well as from a gravity dual approach of hQCD. The core of the matter of our research is the possible origin of the ∼ 99% of the proton mass that is to be accounted for and how the 'vacuum' can be tweaked so that the source of the mass generation can be uncovered by measurements made in terrestrial as well as space laboratories. Some of the issues treated in the program concern what can be done - both theoretically and experimentally - in anticipation of what's to come for basic physics research in Korea. (authors)

The effect of a fictitious peer on young children's choice of familiar v. unfamiliar low- and high-energy-dense foods.

Science.gov (United States)

Bevelander, Kirsten E; Anschütz, Doeschka J; Engels, Rutger C M E

2012-09-28

The present experimental study was the first to investigate the impact of a remote (non-existent) peer on children's food choice of familiar v. unfamiliar low- and high-energy-dense food products. In a computer task, children (n 316; 50·3 % boys; mean age 7·13 (SD 0·75) years) were asked to choose between pictures of familiar and unfamiliar foods in four different choice blocks using the following pairs: (1) familiar v. unfamiliar low-energy-dense foods (fruits and vegetables), (2) familiar v. unfamiliar high-energy-dense foods (high sugar, salt and/or fat content), (3) familiar low-energy-dense v. unfamiliar high-energy-dense foods and (4) unfamiliar low-energy-dense v. familiar high-energy-dense foods. Participants who were not in the control group were exposed to the food choices (either always the familiar or always the unfamiliar food product) of a same-sex and same-age fictitious peer who was supposedly completing the same task at another school. The present study provided insights into children's choices between (un)familiar low- and high-energy-dense foods in an everyday situation. The findings revealed that the use of fictitious peers increased children's willingness to try unfamiliar foods, although children tended to choose high-energy-dense foods over low-energy-dense foods. Intervention programmes that use peer influence to focus on improving children's choice of healthy foods should take into account children's strong aversion to unfamiliar low-energy-dense foods as well as their general preference for familiar and unfamiliar high-energy-dense foods.

Immunological detection of the type V collagen propeptide fragment, PVCP-1230, in connective tissue remodeling associated with liver fibrosis

DEFF Research Database (Denmark)

Vassiliadis, Efstathios; Veidal, Sanne Skovgård; Simonsen, Henrik

2011-01-01

AIM: Liver fibrosis involves excessive remodeling and deposition of fibrillar extracellular matrix (ECM) components, which leads to malfunction of the organ, causing significant morbidity and mortality. The aim of this study was to assess whether levels of a type V collagen fragment, the propepti...

Complement activation by the amyloid proteins A beta peptide and beta 2-microglobulin

DEFF Research Database (Denmark)

Nybo, Mads; Nielsen, E H; Svehag, S E

1999-01-01

component nor heparan sulfate did significantly alter the A beta-induced CA. The results indicate that not only fibrillar A beta but also oligomers of, in particular, beta 2M from patients with dialysis-associated amyloidosis are capable of inducing CA at supra-physiological concentrations....

Dense Medium Machine Processing Method for Palm Kernel/ Shell ...

African Journals Online (AJOL)

ADOWIE PERE

Cracked palm kernel is a mixture of kernels, broken shells, dusts and other impurities. In ... machine processing method using dense medium, a separator, a shell collector and a kernel .... efficiency, ease of maintenance and uniformity of.

Leeuwpan fine coal dense medium plant

CSIR Research Space (South Africa)

Lundt, M

2010-11-01

Full Text Available Beneficiation 2010, 4–6 May 2010. 671The Journal of The Southern African Institute of Mining and Metallurgy VOLUME 110 NOVEMBER 2010 L Leeuwpan fine coal dense medium plant mixed with magnetite in the launder and enters... with production. Plant equipment operational changes Cyclone spigot changes In an attempt to lower the cut-point density, the spigot on the L 672 NOVEMBER 2010 VOLUME 110 The Journal of The Southern African Institute of Mining and Metallurgy Figure 1...

The ubiquity of energy-dense snack foods: a national multicity study.

Science.gov (United States)

Farley, Thomas A; Baker, Erin T; Futrell, Lauren; Rice, Janet C

2010-02-01

We assessed the availability and accessibility of energy-dense snacks in retail stores whose primary merchandise was not food and whether these varied by store type, region, or socioeconomic factors. We conducted systematic observations of 1082 retail stores in 19 US cities and determined the availability and accessibility of 6 categories of energy-dense snack foods. Snack food was available in 41% of the stores; the most common forms were candy (33%), sweetened beverages (20%), and salty snacks (17%). These foods were often within arm's reach of the cash register queue. We observed snack foods in 96% of pharmacies, 94% of gasoline stations, 22% of furniture stores, 16% of apparel stores, and 29% to 65% of other types of stores. Availability varied somewhat by region but not by the racial or socioeconomic characteristics of nearby census tracts. Energy-dense snack foods and beverages, implicated as contributors to the obesity epidemic, are widely available in retail stores whose primary business is not food. The ubiquity of these products may contribute to excess energy consumption in the United States.

Fusion of LIDAR Data and Multispectral Imagery for Effective Building Detection Based on Graph and Connected Component Analysis

Science.gov (United States)

Gilani, S. A. N.; Awrangjeb, M.; Lu, G.

2015-03-01

Building detection in complex scenes is a non-trivial exercise due to building shape variability, irregular terrain, shadows, and occlusion by highly dense vegetation. In this research, we present a graph based algorithm, which combines multispectral imagery and airborne LiDAR information to completely delineate the building boundaries in urban and densely vegetated area. In the first phase, LiDAR data is divided into two groups: ground and non-ground data, using ground height from a bare-earth DEM. A mask, known as the primary building mask, is generated from the non-ground LiDAR points where the black region represents the elevated area (buildings and trees), while the white region describes the ground (earth). The second phase begins with the process of Connected Component Analysis (CCA) where the number of objects present in the test scene are identified followed by initial boundary detection and labelling. Additionally, a graph from the connected components is generated, where each black pixel corresponds to a node. An edge of a unit distance is defined between a black pixel and a neighbouring black pixel, if any. An edge does not exist from a black pixel to a neighbouring white pixel, if any. This phenomenon produces a disconnected components graph, where each component represents a prospective building or a dense vegetation (a contiguous block of black pixels from the primary mask). In the third phase, a clustering process clusters the segmented lines, extracted from multispectral imagery, around the graph components, if possible. In the fourth step, NDVI, image entropy, and LiDAR data are utilised to discriminate between vegetation, buildings, and isolated building's occluded parts. Finally, the initially extracted building boundary is extended pixel-wise using NDVI, entropy, and LiDAR data to completely delineate the building and to maximise the boundary reach towards building edges. The proposed technique is evaluated using two Australian data sets

THE JCMT GOULD BELT SURVEY: A FIRST LOOK AT DENSE CORES IN ORION B

International Nuclear Information System (INIS)

Kirk, H.; Francesco, J. Di; Johnstone, D.; Duarte-Cabral, A.; Hatchell, J.; Sadavoy, S.; Mottram, J. C.; Buckle, J.; Salji, C.; Berry, D. S.; Currie, M. J.; Jenness, T.; Broekhoven-Fiene, H.; Fich, M.; Tisi, S.; Nutter, D.; Quinn, C.; Pattle, K.; Pineda, J. E.; Hogerheijde, M. R.

2016-01-01

We present a first look at the SCUBA-2 observations of three sub-regions of the Orion B molecular cloud: LDN 1622, NGC 2023/2024, and NGC 2068/2071, from the JCMT Gould Belt Legacy Survey. We identify 29, 564, and 322 dense cores in L1622, NGC 2023/2024, and NGC 2068/2071 respectively, using the SCUBA-2 850 μm map, and present their basic properties, including their peak fluxes, total fluxes, and sizes, and an estimate of the corresponding 450 μm peak fluxes and total fluxes, using the FellWalker source extraction algorithm. Assuming a constant temperature of 20 K, the starless dense cores have a mass function similar to that found in previous dense core analyses, with a Salpeter-like slope at the high-mass end. The majority of cores appear stable to gravitational collapse when considering only thermal pressure; indeed, most of the cores which have masses above the thermal Jeans mass are already associated with at least one protostar. At higher cloud column densities, above 1–2 × 10 23 cm −2 , most of the mass is found within dense cores, while at lower cloud column densities, below 1 × 10 23 cm −2 , this fraction drops to 10% or lower. Overall, the fraction of dense cores associated with a protostar is quite small (<8%), but becomes larger for the densest and most centrally concentrated cores. NGC 2023/2024 and NGC 2068/2071 appear to be on the path to forming a significant number of stars in the future, while L1622 has little additional mass in dense cores to form many new stars

Progress towards an ab initio real-time treatment of warm dense matter

Science.gov (United States)

Baczewski, Andrew; Cangi, Attila; Hansen, Stephanie; Jensen, Daniel

2017-10-01

Time-dependent density functional theory (TDDFT) provides an accurate description of equilibrium properties of warm dense matter, such as the dynamic structure factor (Baczewski et al., Phys. Rev. Lett., 116(11), 2016). While non-equilibrium properties, such as stopping power, have also been demonstrated to be within the grasp of TDDFT, the ultrafast isochoric heating of condensed matter into the warm dense state, enabled by recent advances in XFELs, remains beyond its capabilities. In this talk, we will describe the successes of and continuing challenges for TDDFT for warm dense matter, and present progress towards a more complete ab initio treatment of isochoric x-ray heating. Sandia National Laboratories is a multi-mission laboratory managed and operated by National Technology and Engineering Solutions of Sandia, LLC, a wholly owned subsidiary of Honeywell International, Inc., for the DOE's National Nuclear Security Administration under contract DE-NA0003525.

Improved understanding of the acoustophoretic focusing of dense suspensions in a microchannel

Science.gov (United States)

Karthick, S.; Sen, A. K.

2017-11-01

We provide improved understanding of acoustophoretic focusing of a dense suspension (volume fraction φ >10 % ) in a microchannel subjected to an acoustic standing wave using a proposed theoretical model and experiments. The model is based on the theory of interacting continua and utilizes a momentum transport equation for the mixture, continuity equation, and transport equation for the solid phase. The model demonstrates the interplay between acoustic radiation and shear-induced diffusion (SID) forces that is critical in the focusing of dense suspensions. The shear-induced particle migration model of Leighton and Acrivos, coupled with the acoustic radiation force, is employed to simulate the continuum behavior of particles. In the literature, various closures for the diffusion coefficient Dφ* are available for rigid spheres at high concentrations and nonspherical deformable particles [e.g., red blood cells (RBCs)] at low concentrations. Here we propose a closure for Dφ* for dense suspension of RBCs and validate the proposed model with experimental data. While the available closures for Dφ* fail to predict the acoustic focusing of a dense suspension of nonspherical deformable particles like RBCs, the predictions of the proposed model match experimental data within 15%. Both the model and experiments reveal a competition between acoustic radiation and SID forces that gives rise to an equilibrium width w* of a focused stream of particles at some distance Leq* along the flow direction. Using different shear rates, acoustic energy densities, and particle concentrations, we show that the equilibrium width is governed by Péclet number Pe and Strouhal number Stas w*=1.4(PeSt) -0.5 while the length required to obtain the equilibrium-focused width depends on St as Leq*=3.8 /(St)0.6 . The proposed model and correlations would find significance in the design of microchannels for acoustic focusing of dense suspensions such as undiluted blood.

Implementation and Re nement of a Comprehensive Model for Dense Granular Flows

Energy Technology Data Exchange (ETDEWEB)

Sundaresan, Sankaran [The Trustees Of Princeton University, Princeton, NJ (United States)

2015-09-30

Dense granular ows are ubiquitous in both natural and industrial processes. They manifest three di erent ow regimes, each exhibiting its own dependence on solids volume fraction, shear rate, and particle-level properties. This research project sought to develop continuum rheological models for dense granular ows that bridges multiple regimes of ow, implement them in open-source platforms for gas-particle ows and perform test simulations. The rst phase of the research covered in this project involved implementation of a steady- shear rheological model that bridges quasi-static, intermediate and inertial regimes of ow into MFIX (Multiphase Flow with Interphase eXchanges - a general purpose computer code developed at the National Energy Technology Laboratory). MFIX simulations of dense granular ows in hourglass-shaped hopper were then performed as test examples. The second phase focused on formulation of a modi ed kinetic theory for frictional particles that can be used over a wider range of particle volume fractions and also apply for dynamic, multi- dimensional ow conditions. To guide this work, simulations of simple shear ows of identical mono-disperse spheres were also performed using the discrete element method. The third phase of this project sought to develop and implement a more rigorous treatment of boundary e ects. Towards this end, simulations of simple shear ows of identical mono-disperse spheres con ned between parallel plates were performed and analyzed to formulate compact wall boundary conditions that can be used for dense frictional ows at at frictional boundaries. The fourth phase explored the role of modest levels of cohesive interactions between particles on the dense phase rheology. The nal phase of this project focused on implementation and testing of the modi ed kinetic theory in MFIX and running bin-discharge simulations as test examples.

Dense film polyimide membranes for aggressive sour gas feed separations

KAUST Repository

Kraftschik, Brian; Koros, William J.; Johnson, J.R.; Karvan, Oguz

2013-01-01

Dense film membranes of the copolyimide 6FDA-DAM:DABA (3:2) are studied for simultaneous removal of CO2 and H2S from sour natural gas streams. Pure and mixed gas permeation as well as pure gas sorption data are reported at 35°C and pressures up to 62bar. The H2S partial pressures used are representative of highly aggressive field operations. Penetrant-induced plasticization effects are evident at feed pressures below 1bar in pure H2S feeds; sub-Tg thermal annealing is used to effectively mitigate this effect, and these annealed films are used throughout the study. Surprisingly, H2S/CH4 selectivity nearly doubles for mixed gas testing in comparison to the pure component ideal selectivity values and approaches the level of a state-of-the-art glassy polymer, cellulose acetate (CA), at H2S partial pressures above 2bar. Furthermore, permeation experiments using a 9.95% H2S, 19.9% CO2, 70.15% CH4 mixture at low feed pressures give CO2/CH4 selectivity of up to 49-over 30% greater than the pure component selectivity for 6FDA-DAM:DABA (3:2). The overall sour gas separation performance of this polyimide is comparable to high-performance rubbery polymer membranes, which have been reported for only moderate H2S partial pressure feeds, and is superior to that for CA based on a practical combined acid gas separation efficiency metric that we introduce. Finally, methods for continued development of the current polyimide membrane material for aggressive sour gas separations are presented. © 2012 Elsevier B.V.

Dense film polyimide membranes for aggressive sour gas feed separations

KAUST Repository

Kraftschik, Brian

2013-02-01

Dense film membranes of the copolyimide 6FDA-DAM:DABA (3:2) are studied for simultaneous removal of CO2 and H2S from sour natural gas streams. Pure and mixed gas permeation as well as pure gas sorption data are reported at 35°C and pressures up to 62bar. The H2S partial pressures used are representative of highly aggressive field operations. Penetrant-induced plasticization effects are evident at feed pressures below 1bar in pure H2S feeds; sub-Tg thermal annealing is used to effectively mitigate this effect, and these annealed films are used throughout the study. Surprisingly, H2S/CH4 selectivity nearly doubles for mixed gas testing in comparison to the pure component ideal selectivity values and approaches the level of a state-of-the-art glassy polymer, cellulose acetate (CA), at H2S partial pressures above 2bar. Furthermore, permeation experiments using a 9.95% H2S, 19.9% CO2, 70.15% CH4 mixture at low feed pressures give CO2/CH4 selectivity of up to 49-over 30% greater than the pure component selectivity for 6FDA-DAM:DABA (3:2). The overall sour gas separation performance of this polyimide is comparable to high-performance rubbery polymer membranes, which have been reported for only moderate H2S partial pressure feeds, and is superior to that for CA based on a practical combined acid gas separation efficiency metric that we introduce. Finally, methods for continued development of the current polyimide membrane material for aggressive sour gas separations are presented. © 2012 Elsevier B.V.

Rat hair follicle dermal papillae have an extracellular matrix containing basement membrane components

DEFF Research Database (Denmark)

Couchman, J R

1986-01-01

, to be replaced by synthesis of other components including type I and III collagens. It seems likely therefore that the dermal papilla cells in vivo synthesize a basement membrane type of extracellular matrix, although a contribution from epithelial, and in some cases capillary endothelial, cells cannot be ruled......Dermal papillae are small mesenchymally derived zones at the bases of hair follicles which have an important role in hair morphogenesis in the embryo and control of the hair growth cycle in postnatal mammals. The cells of the papilla are enmeshed in a dense extracellular matrix which undergoes...... extensive changes in concert with the hair cycle. Here it is shown that this matrix in anagen pelage follicles of postnatal rats contains an abundance of basement membrane components rather than dermal components such as interstitial collagens. In particular, type IV collagen, laminin, and basement membrane...

Estimation of Dense Image Flow Fields in Fluids

DEFF Research Database (Denmark)

Larsen, Rasmus; Conradsen, Knut; Ersbøll, Bjarne Kjær

or an estimate there-of is known. Estimated flow fields in weather satellite imagery might also be used on an operational basis as inputs to short-term weather prediction. In this article we describe a method for the estimation of dense flow fields. Local measurements of motion are obtained by analysis...

Estimation of Dense Image Flow Fields in Fluids

DEFF Research Database (Denmark)

Larsen, Rasmus; Conradsen, Knut; Ersbøll, Bjarne Kjær

1998-01-01

or an estimate there-of is known. Estimated flow fields in weather satellite imagery might also be used on an operational basis as inputs to short-term weather prediction. In this article we describe a method for the estimation of dense flow fields. Local measurements of motion are obtained by analysis...

DENSE CORES IN THE PIPE NEBULA: AN IMPROVED CORE MASS FUNCTION

International Nuclear Information System (INIS)

Rathborne, J. M.; Lada, C. J.; Muench, A. A.; Alves, J. F.; Kainulainen, J.; Lombardi, M.

2009-01-01

In this paper, we derive an improved core mass function (CMF) for the Pipe Nebula from a detailed comparison between measurements of visual extinction and molecular-line emission. We have compiled a refined sample of 201 dense cores toward the Pipe Nebula using a two-dimensional threshold identification algorithm informed by recent simulations of dense core populations. Measurements of radial velocities using complimentary C 18 O (1-0) observations enable us to cull out from this sample those 43 extinction peaks that are either not associated with dense gas or are not physically associated with the Pipe Nebula. Moreover, we use the derived C 18 O central velocities to differentiate between single cores with internal structure and blends of two or more physically distinct cores, superposed along the same line of sight. We then are able to produce a more robust dense core sample for future follow-up studies and a more reliable CMF than was possible previously. We confirm earlier indications that the CMF for the Pipe Nebula departs from a single power-law-like form with a break or knee at M ∼ 2.7 ± 1.3 M sun . Moreover, we also confirm that the CMF exhibits a similar shape to the stellar initial mass function (IMF), but is scaled to higher masses by a factor of ∼4.5. We interpret this difference in scaling to be a measure of the star formation efficiency (22% ± 8%). This supports earlier suggestions that the stellar IMF may originate more or less directly from the CMF.

Inferring segmented dense motion layers using 5D tensor voting.

Science.gov (United States)

Min, Changki; Medioni, Gérard

2008-09-01

We present a novel local spatiotemporal approach to produce motion segmentation and dense temporal trajectories from an image sequence. A common representation of image sequences is a 3D spatiotemporal volume, (x,y,t), and its corresponding mathematical formalism is the fiber bundle. However, directly enforcing the spatiotemporal smoothness constraint is difficult in the fiber bundle representation. Thus, we convert the representation into a new 5D space (x,y,t,vx,vy) with an additional velocity domain, where each moving object produces a separate 3D smooth layer. The smoothness constraint is now enforced by extracting 3D layers using the tensor voting framework in a single step that solves both correspondence and segmentation simultaneously. Motion segmentation is achieved by identifying those layers, and the dense temporal trajectories are obtained by converting the layers back into the fiber bundle representation. We proceed to address three applications (tracking, mosaic, and 3D reconstruction) that are hard to solve from the video stream directly because of the segmentation and dense matching steps, but become straightforward with our framework. The approach does not make restrictive assumptions about the observed scene or camera motion and is therefore generally applicable. We present results on a number of data sets.

Object-Based Dense Matching Method for Maintaining Structure Characteristics of Linear Buildings.

Science.gov (United States)

Su, Nan; Yan, Yiming; Qiu, Mingjie; Zhao, Chunhui; Wang, Liguo

2018-03-29

In this paper, we proposed a novel object-based dense matching method specially for the high-precision disparity map of building objects in urban areas, which can maintain accurate object structure characteristics. The proposed framework mainly includes three stages. Firstly, an improved edge line extraction method is proposed for the edge segments to fit closely to building outlines. Secondly, a fusion method is proposed for the outlines under the constraint of straight lines, which can maintain the building structural attribute with parallel or vertical edges, which is very useful for the dense matching method. Finally, we proposed an edge constraint and outline compensation (ECAOC) dense matching method to maintain building object structural characteristics in the disparity map. In the proposed method, the improved edge lines are used to optimize matching search scope and matching template window, and the high-precision building outlines are used to compensate the shape feature of building objects. Our method can greatly increase the matching accuracy of building objects in urban areas, especially at building edges. For the outline extraction experiments, our fusion method verifies the superiority and robustness on panchromatic images of different satellites and different resolutions. For the dense matching experiments, our ECOAC method shows great advantages for matching accuracy of building objects in urban areas compared with three other methods.

Object-Based Dense Matching Method for Maintaining Structure Characteristics of Linear Buildings

Directory of Open Access Journals (Sweden)

Nan Su

2018-03-01

Full Text Available In this paper, we proposed a novel object-based dense matching method specially for the high-precision disparity map of building objects in urban areas, which can maintain accurate object structure characteristics. The proposed framework mainly includes three stages. Firstly, an improved edge line extraction method is proposed for the edge segments to fit closely to building outlines. Secondly, a fusion method is proposed for the outlines under the constraint of straight lines, which can maintain the building structural attribute with parallel or vertical edges, which is very useful for the dense matching method. Finally, we proposed an edge constraint and outline compensation (ECAOC dense matching method to maintain building object structural characteristics in the disparity map. In the proposed method, the improved edge lines are used to optimize matching search scope and matching template window, and the high-precision building outlines are used to compensate the shape feature of building objects. Our method can greatly increase the matching accuracy of building objects in urban areas, especially at building edges. For the outline extraction experiments, our fusion method verifies the superiority and robustness on panchromatic images of different satellites and different resolutions. For the dense matching experiments, our ECOAC method shows great advantages for matching accuracy of building objects in urban areas compared with three other methods.

Left ventricular strain and its pattern estimated from cine CMR and validation with DENSE.

Science.gov (United States)

Gao, Hao; Allan, Andrew; McComb, Christie; Luo, Xiaoyu; Berry, Colin

2014-07-07

Measurement of local strain provides insight into the biomechanical significance of viable myocardium. We attempted to estimate myocardial strain from cine cardiovascular magnetic resonance (CMR) images by using a b-spline deformable image registration method. Three healthy volunteers and 41 patients with either recent or chronic myocardial infarction (MI) were studied at 1.5 Tesla with both cine and DENSE CMR. Regional circumferential and radial left ventricular strains were estimated from cine and DENSE acquisitions. In all healthy volunteers, there was no difference for peak circumferential strain (- 0.18 ± 0.04 versus - 0.18 ± 0.03, p = 0.76) between cine and DENSE CMR, however peak radial strain was overestimated from cine (0.84 ± 0.37 versus 0.49 ± 0.2, p cine were similar to the patterns from DENSE, including the strain evolution related to recovery time and strain patterns related to MI scar extent. Furthermore, cine-derived strain disclosed different strain patterns in MI and non-MI regions, and regions with transmural and non-transmural MI as DENSE. Although there were large variations with radial strain measurements from cine CMR images, useful circumferential strain information can be obtained from routine clinical CMR imaging. Cine strain analysis has potential to improve the diagnostic yield from routine CMR imaging in clinical practice.

Intrinsically secure fast reactors with dense cores

International Nuclear Information System (INIS)

Slessarev, Igor

2007-01-01

Secure safety, resistance to weapons material proliferation and problems of long-lived wastes remain the most important 'painful points' of nuclear power. Many innovative reactor concepts have been developed aimed at a radical enhancement of safety. The promising potential of innovative nuclear reactors allows for shifting accents in current reactor safety 'strategy' to reveal this worth. Such strategy is elaborated focusing on the priority for intrinsically secure safety features as well as on sure protection being provided by the first barrier of defence. Concerning the potential of fast reactors (i.e. sodium cooled, lead-cooled, etc.), there are no doubts that they are able to possess many favourable intrinsically secure safety features and to lay the proper foundation for a new reactor generation. However, some of their neutronic characteristics have to be radically improved. Among intrinsically secure safety properties, the following core parameters are significantly important: reactivity margin values, reactivity feed-back and coolant void effects. Ways of designing intrinsically secure safety features in fast reactors (titled hereafter as Intrinsically Secure Fast Reactors - ISFR) can be found in the frame of current reactor technologies by radical enhancement of core neutron economy and by optimization of core compositions. Simultaneously, respecting resistance to proliferation, by using non-enriched fuel feed as well as a core breeding gain close to zero, are considered as the important features (long-lived waste problems will be considered in a separate paper). This implies using the following reactor design options as well as closed fuel cycles with natural U as the reactor feed: ·Ultra-plate 'dense cores' of the ordinary (monolithic) type with negative total coolant void effects. ·Modular type cores. Multiple dense modules can be embedded in the common reflector for achieving the desired NPP total power. The modules can be used also independently (as

A comparative study of fast dense stereo vision algorithms

NARCIS (Netherlands)

Sunyoto, H.; Mark, W. van der; Gavrila, D.M.

2004-01-01

With recent hardware advances, real-time dense stereo vision becomes increasingly feasible for general-purpose processors. This has important benefits for the intelligent vehicles domain, alleviating object segmentation problems when sensing complex, cluttered traffic scenes. In this paper, we

Complexation induced phase separation: preparation of composite membranes with a nanometer thin dense skin loaded with metal ions

KAUST Repository

Villalobos Vazquez de la Parra, Luis Francisco; Karunakaran, Madhavan; Peinemann, Klaus-Viktor

2015-01-01

We present the development of a facile phase-inversion method for forming asymmetric membranes with a precise high metal ion loading capacity in only the dense layer. The approach combines the use of macromolecule-metal intermolecular complexes to form the dense layer of asymmetric membranes with nonsolvent-induced phase separation to form the porous support. This allows the independent optimization of both the dense layer and porous support while maintaining the simplicity of a phase-inversion process. Moreover, it facilitates control over (i) the thickness of the dense layer throughout several orders of magnitude—from less than 15 nm to more than 6 μm, (ii) the type and amount of metal ions loaded in the dense layer, (iii) the morphology of the membrane surface, and (iv) the porosity and structure of the support. This simple and scalable process provides a new platform for building multifunctional membranes with a high loading of well-dispersed metal ions in the dense layer.

Complexation induced phase separation: preparation of composite membranes with a nanometer thin dense skin loaded with metal ions

KAUST Repository

Villalobos Vazquez de la Parra, Luis Francisco

2015-04-21

We present the development of a facile phase-inversion method for forming asymmetric membranes with a precise high metal ion loading capacity in only the dense layer. The approach combines the use of macromolecule-metal intermolecular complexes to form the dense layer of asymmetric membranes with nonsolvent-induced phase separation to form the porous support. This allows the independent optimization of both the dense layer and porous support while maintaining the simplicity of a phase-inversion process. Moreover, it facilitates control over (i) the thickness of the dense layer throughout several orders of magnitude—from less than 15 nm to more than 6 μm, (ii) the type and amount of metal ions loaded in the dense layer, (iii) the morphology of the membrane surface, and (iv) the porosity and structure of the support. This simple and scalable process provides a new platform for building multifunctional membranes with a high loading of well-dispersed metal ions in the dense layer.

HD 62542: Probing the Bare, Dense Core of an Interstellar Cloud

Science.gov (United States)

Welty, Daniel; Sonnentrucker, Paule G.; Rachford, Brian; Snow, Theodore; York, Donald G.

2018-01-01

We discuss the interstellar absorption from many atomic and molecular species seen in high-resolution HST/STIS UV spectra of the moderately reddened B3-5 V star HD 62542 [E(B-V) ~ 0.35; AV ~ 1.2]. This remarkable sight line exhibits both very steep far-UV extinction and a high fraction of hydrogen in molecular form -- with strong absorption from CH, C2, CN, and CO but weak absorption from CH+ and most of the commonly observed diffuse interstellar bands. Most of the material appears to reside in a single narrow velocity component -- thus offering a rare opportunity to probe the relatively dense, primarily molecular core of a single interstellar cloud, with little associated diffuse atomic gas.Detailed analyses of the absorption-line profiles seen in the UV spectra reveal a number of properties of the main diffuse molecular cloud toward HD 62542:1) The depletions of Mg, Si, and Fe are more severe than those seen in any other sight line, but the depletions of Cl and Kr are very mild; the overall pattern of depletions differs somewhat from those derived from larger samples of Galactic sight lines.2) The rotational excitation of H2 and C2 indicates that the gas is fairly cold (Tk = 40-45 K) and moderately dense (nH > 420 cm-3) somewhat higher densities are suggested by the fine-structure excitation of neutral carbon.3) The excitation temperatures characterizing the rotational populations of both 12CO (11.7 K) and 13CO (7.7 K) are higher than those typically found for Galactic diffuse molecular clouds.4) Carbon is primarily singly ionized -- N(C+) > N(CO) > N(C).5) The relative abundances of various trace neutral atomic species reflect the effects of both the steep far-UV extinction and the severe depletions of some elements.6) Differences in line widths for the various atomic and molecular species are suggestive of differences in spatial distribution within the main cloud.Support for this study was provided by NASA, via STScI grant GO-12277.008-A.

Anomalous optical and electronic properties of dense sodium

International Nuclear Information System (INIS)

Li Dafang; Liu Hanyu; Wang Baotian; Shi Hongliang; Zhu Shaoping; Yan Jun; Zhang Ping

2010-01-01

Based on the density functional theory, we systematically study the optical and electronic properties of the insulating dense sodium phase (Na-hp4) reported recently (Ma et al., 2009). The structure is found optically anisotropic. Through Bader analysis, we conclude that ionicity exists in the structure and becomes stronger with increasing pressure.

Tools to Perform Local Dense 3D Reconstruction of Shallow Water Seabed.

Science.gov (United States)

Avanthey, Loïca; Beaudoin, Laurent; Gademer, Antoine; Roux, Michel

2016-05-17

Tasks such as distinguishing or identifying individual objects of interest require the production of dense local clouds at the scale of these individual objects of interest. Due to the physical and dynamic properties of an underwater environment, the usual dense matching algorithms must be rethought in order to be adaptive. These properties also imply that the scene must be observed at close range. Classic robotized acquisition systems are oversized for local studies in shallow water while the systematic acquisition of data is not guaranteed with divers. We address these two major issues through a multidisciplinary approach. To efficiently acquire on-demand stereoscopic pairs using simple logistics in small areas of shallow water, we devised an agile light-weight dedicated system which is easy to reproduce. To densely match two views in a reliable way, we devised a reconstruction algorithm that automatically accounts for the dynamics, variability and light absorption of the underwater environment. Field experiments in the Mediterranean Sea were used to assess the results.

Sparse symmetric preconditioners for dense linear systems in electromagnetism

NARCIS (Netherlands)

Carpentieri, Bruno; Duff, Iain S.; Giraud, Luc; Monga Made, M. Magolu

2004-01-01

We consider symmetric preconditioning strategies for the iterative solution of dense complex symmetric non-Hermitian systems arising in computational electromagnetics. In particular, we report on the numerical behaviour of the classical incomplete Cholesky factorization as well as some of its recent

THE JCMT GOULD BELT SURVEY: A FIRST LOOK AT DENSE CORES IN ORION B

Energy Technology Data Exchange (ETDEWEB)

Kirk, H.; Francesco, J. Di; Johnstone, D. [NRC Herzberg Astronomy and Astrophysics, 5071 West Saanich Rd, Victoria, BC, V9E 2E7 (Canada); Duarte-Cabral, A.; Hatchell, J. [Physics and Astronomy, University of Exeter, Stocker Road, Exeter EX4 4QL (United Kingdom); Sadavoy, S.; Mottram, J. C. [Max Planck Institute for Astronomy, Königstuhl 17, D-69117 Heidelberg (Germany); Buckle, J.; Salji, C. [Astrophysics Group, Cavendish Laboratory, J J Thomson Avenue, Cambridge, CB3 0HE (United Kingdom); Berry, D. S.; Currie, M. J.; Jenness, T. [Joint Astronomy Centre, 660 N. A‘ohōkū Place, University Park, Hilo, Hawaii 96720 (United States); Broekhoven-Fiene, H. [Department of Physics and Astronomy, University of Victoria, Victoria, BC, V8P 1A1 (Canada); Fich, M.; Tisi, S. [Department of Physics and Astronomy, University of Waterloo, Waterloo, Ontario, N2L 3G1 (Canada); Nutter, D.; Quinn, C. [School of Physics and Astronomy, Cardiff University, The Parade, Cardiff, CF24 3AA (United Kingdom); Pattle, K. [Jeremiah Horrocks Institute, University of Central Lancashire, Preston, Lancashire, PR1 2HE (United Kingdom); Pineda, J. E. [European Southern Observatory (ESO), Garching (Germany); Hogerheijde, M. R. [Leiden Observatory, Leiden University, P.O. Box 9513, 2300 RA Leiden (Netherlands); and others

2016-02-01

We present a first look at the SCUBA-2 observations of three sub-regions of the Orion B molecular cloud: LDN 1622, NGC 2023/2024, and NGC 2068/2071, from the JCMT Gould Belt Legacy Survey. We identify 29, 564, and 322 dense cores in L1622, NGC 2023/2024, and NGC 2068/2071 respectively, using the SCUBA-2 850 μm map, and present their basic properties, including their peak fluxes, total fluxes, and sizes, and an estimate of the corresponding 450 μm peak fluxes and total fluxes, using the FellWalker source extraction algorithm. Assuming a constant temperature of 20 K, the starless dense cores have a mass function similar to that found in previous dense core analyses, with a Salpeter-like slope at the high-mass end. The majority of cores appear stable to gravitational collapse when considering only thermal pressure; indeed, most of the cores which have masses above the thermal Jeans mass are already associated with at least one protostar. At higher cloud column densities, above 1–2 × 10{sup 23} cm{sup −2}, most of the mass is found within dense cores, while at lower cloud column densities, below 1 × 10{sup 23} cm{sup −2}, this fraction drops to 10% or lower. Overall, the fraction of dense cores associated with a protostar is quite small (<8%), but becomes larger for the densest and most centrally concentrated cores. NGC 2023/2024 and NGC 2068/2071 appear to be on the path to forming a significant number of stars in the future, while L1622 has little additional mass in dense cores to form many new stars.

Particle identification system based on dense aerogel

Energy Technology Data Exchange (ETDEWEB)

Barnyakov, A.Yu. [Budker Institute of Nuclear Physics, 11, akademika Lavrentieva prospect, Novosibirsk 630090 (Russian Federation); Barnyakov, M.Yu. [Budker Institute of Nuclear Physics, 11, akademika Lavrentieva prospect, Novosibirsk 630090 (Russian Federation); Novosibirsk State Technical University, 20, Karl Marx prospect, Novosibirsk, 630092 (Russian Federation); Beloborodov, K.I., E-mail: K.I.Beloborodov@inp.nsk.su [Budker Institute of Nuclear Physics, 11, akademika Lavrentieva prospect, Novosibirsk 630090 (Russian Federation); Novosibirsk State University, 2, Pirogova Street, Novosibirsk 630090 (Russian Federation); Bobrovnikov, V.S.; Buzykaev, A.R. [Budker Institute of Nuclear Physics, 11, akademika Lavrentieva prospect, Novosibirsk 630090 (Russian Federation); Danilyuk, A.F. [Boreskov Institute of Catalysis, 5, akademika Lavrentieva prospect, Novosibirsk 630090 (Russian Federation); Golubev, V.B. [Budker Institute of Nuclear Physics, 11, akademika Lavrentieva prospect, Novosibirsk 630090 (Russian Federation); Novosibirsk State University, 2, Pirogova Street, Novosibirsk 630090 (Russian Federation); Gulevich, V.V. [Budker Institute of Nuclear Physics, 11, akademika Lavrentieva prospect, Novosibirsk 630090 (Russian Federation); Kononov, S.A.; Kravchenko, E.A. [Budker Institute of Nuclear Physics, 11, akademika Lavrentieva prospect, Novosibirsk 630090 (Russian Federation); Novosibirsk State University, 2, Pirogova Street, Novosibirsk 630090 (Russian Federation); Onuchin, A.P.; Martin, K.A. [Budker Institute of Nuclear Physics, 11, akademika Lavrentieva prospect, Novosibirsk 630090 (Russian Federation); Novosibirsk State Technical University, 20, Karl Marx prospect, Novosibirsk, 630092 (Russian Federation); Serednyakov, S.I. [Budker Institute of Nuclear Physics, 11, akademika Lavrentieva prospect, Novosibirsk 630090 (Russian Federation); Novosibirsk State University, 2, Pirogova Street, Novosibirsk 630090 (Russian Federation); and others

2013-12-21

A threshold Cherenkov counter based on dense aerogel with refraction index n=1.13 is described. This counter is used for kaon identification at momenta below 1 GeV/c in the SND detector, which takes data at the VEPP-2000 e{sup +}e{sup −} collider. The results of measurements of the counter efficiency using electrons, muons, pions, and kaons produced in e{sup +}e{sup −} annihilation are presented.

Novel method for measuring a dense 3D strain map of robotic flapping wings

Science.gov (United States)

Li, Beiwen; Zhang, Song

2018-04-01

Measuring dense 3D strain maps of the inextensible membranous flapping wings of robots is of vital importance to the field of bio-inspired engineering. Conventional high-speed 3D videography methods typically reconstruct the wing geometries through measuring sparse points with fiducial markers, and thus cannot obtain the full-field mechanics of the wings in detail. In this research, we propose a novel system to measure a dense strain map of inextensible membranous flapping wings by developing a superfast 3D imaging system and a computational framework for strain analysis. Specifically, first we developed a 5000 Hz 3D imaging system based on the digital fringe projection technique using the defocused binary patterns to precisely measure the dynamic 3D geometries of rapidly flapping wings. Then, we developed a geometry-based algorithm to perform point tracking on the precisely measured 3D surface data. Finally, we developed a dense strain computational method using the Kirchhoff-Love shell theory. Experiments demonstrate that our method can effectively perform point tracking and measure a highly dense strain map of the wings without many fiducial markers.

Experiments on two-step heating of a dense plasma in the GOL-3 facility

International Nuclear Information System (INIS)

Astrelin, V.T.; Burdakov, A.V.; Koidan, V.S.; Mekler, K.I.; Mel'nikov, P.I.; Postupaev, V.V.; Shcheglov, M.A.

1998-01-01

This paper presents the results of experiments on two-stage heating of a dense plasma by a relativistic electron beam in the GOL-3 facility. A dense plasma with a length of about a meter and a hydrogen density up to 10 17 cm -3 was created in the main plasma, whose density was 10 15 cm -3 . In the process of interacting with the plasma, the electron beam (1 MeV, 40 kA, 4 μs) imparts its energy to the electrons of the main plasma through collective effects. The heated electrons, as they disperse along the magnetic field lines, in turn reach the region of dense plasma and impart their energy to it by pairwise collisions. Estimates based on experimental data are given for the parameters of the flux of hot plasma electrons, the energy released in the dense plasma, and the energy balance of the beam-plasma system. The paper discusses the dynamics of the plasma, which is inhomogeneous in density and temperature, including the appearance of pressure waves

Test of a new heat-flow equation for dense-fluid shock waves.

Science.gov (United States)

Holian, Brad Lee; Mareschal, Michel; Ravelo, Ramon

2010-09-21

Using a recently proposed equation for the heat-flux vector that goes beyond Fourier's Law of heat conduction, we model shockwave propagation in the dense Lennard-Jones fluid. Disequilibrium among the three components of temperature, namely, the difference between the kinetic temperature in the direction of a planar shock wave and those in the transverse directions, particularly in the region near the shock front, gives rise to a new transport (equilibration) mechanism not seen in usual one-dimensional heat-flow situations. The modification of the heat-flow equation was tested earlier for the case of strong shock waves in the ideal gas, which had been studied in the past and compared to Navier-Stokes-Fourier solutions. Now, the Lennard-Jones fluid, whose equation of state and transport properties have been determined from independent calculations, allows us to study the case where potential, as well as kinetic contributions are important. The new heat-flow treatment improves the agreement with nonequilibrium molecular-dynamics simulations under strong shock wave conditions, compared to Navier-Stokes.

Star Forming Dense Cloud Cores in the TeV -ray SNR RX J1713.7-3946

Energy Technology Data Exchange (ETDEWEB)

Sano, H.; Sato, J.; Yamamoto, H.; Hayakawa, T.; Torii, K.; Moribe, N.; Kawamura, A.; Okuda, T.; Mizuno, N.; Onishi, T.; Maezawa, H.; Inoue, T.; Inutsuka, S.; Tanaka, T.; Mizuno, A.; Ogawa, H.; Stutzki, J.; Bertoldi, F.; Anderl, S.; Bronfman, L.; Koo, B.C.

2010-10-27

RX J1713.7-3946 is one of the TeV {gamma}-ray supernova remnants (SNRs) emitting synchrotron X rays. The SNR is associated with molecular gas located at {approx}1 kpc. We made new molecular observations toward the dense cloud cores, peaks A, C and D, in the SNR in the {sup 12}CO(J=2-1) and {sup 13}CO(J=2-1) transitions at angular resolution of 90 degrees. The most intense core in {sup 13}CO, peak C, was also mapped in the {sup 12}CO(J=4-3) transition at angular resolution of 38 degrees. Peak C shows strong signs of active star formation including bipolar outflow and a far-infrared protostellar source and has a steep gradient with a r{sup -2.2 {+-} 0.4} variation in the average density within radius r. Peak C and the other dense cloud cores are rim-brightened in synchrotron X rays, suggesting that the dense cloud cores are embedded within or on the outer boundary of the SNR shell. This confirms the earlier suggestion that the X rays are physically associated with the molecular gas (Fukui et al. 2003). We present a scenario where the densest molecular core, peak C, survived against the blast wave and is now embedded within the SNR. Numerical simulations of the shock-cloud interaction indicate that a dense clump can indeed survive shock erosion, since shock propagation speed is stalled in the dense clump. Additionally, the shock-cloud interaction induces turbulence and magnetic field amplification around the dense clump that may facilitate particle acceleration in the lower-density inter-clump space leading to the enhanced synchrotron X rays around dense cores.

High Performance Multi-GPU SpMV for Multi-component PDE-Based Applications

KAUST Repository

Abdelfattah, Ahmad

2015-07-25

Leveraging optimization techniques (e.g., register blocking and double buffering) introduced in the context of KBLAS, a Level 2 BLAS high performance library on GPUs, the authors implement dense matrix-vector multiplications within a sparse-block structure. While these optimizations are important for high performance dense kernel executions, they are even more critical when dealing with sparse linear algebra operations. The most time-consuming phase of many multicomponent applications, such as models of reacting flows or petroleum reservoirs, is the solution at each implicit time step of large, sparse spatially structured or unstructured linear systems. The standard method is a preconditioned Krylov solver. The Sparse Matrix-Vector multiplication (SpMV) is, in turn, one of the most time-consuming operations in such solvers. Because there is no data reuse of the elements of the matrix within a single SpMV, kernel performance is limited by the speed at which data can be transferred from memory to registers, making the bus bandwidth the major bottleneck. On the other hand, in case of a multi-species model, the resulting Jacobian has a dense block structure. For contemporary petroleum reservoir simulations, the block size typically ranges from three to a few dozen among different models, and still larger blocks are relevant within adaptively model-refined regions of the domain, though generally the size of the blocks, related to the number of conserved species, is constant over large regions within a given model. This structure can be exploited beyond the convenience of a block compressed row data format, because it offers opportunities to hide the data motion with useful computations. The new SpMV kernel outperforms existing state-of-the-art implementations on single and multi-GPUs using matrices with dense block structure representative of porous media applications with both structured and unstructured multi-component grids.

Predictors of changes in adolescents' consumption of fruits, vegetables and energy-dense snacks.

Science.gov (United States)

Pearson, Natalie; Ball, Kylie; Crawford, David

2011-03-01

Understanding the predictors of developmental changes in adolescent eating behaviours is important for the design of nutrition interventions. The present study examined associations between individual, social and physical environmental factors and changes in adolescent eating behaviours over 2 years. Consumption of fruits, vegetables and energy-dense snacks was assessed using a Web-based survey completed by 1850 adolescents from years 7 and 9 of secondary schools in Victoria, Australia, at baseline and 2 years later. Perceived value of healthy eating, self-efficacy for healthy eating, social modelling and support, and home availability and accessibility of foods were assessed at baseline. Self-efficacy for increasing fruit consumption was positively associated with the change in fruit and vegetable consumption, while self-efficacy for decreasing junk food consumption was inversely associated with the change in energy-dense snack consumption. Home availability of energy-dense foods was inversely associated with the change in fruit consumption and positively associated with the change in energy-dense snack consumption, while home availability of fruits and vegetables was positively associated with the change in vegetable consumption. Perceived value of healthy eating and modelling of healthy eating by mothers were positively associated with the change in fruit consumption. Support of best friends for healthy eating was positively associated with the change in vegetable consumption. Self-efficacy and home availability of foods appear to be consistent predictors of change in fruit, vegetable and energy-dense snack consumption. Future study should assess the effectiveness of methods to increase self-efficacy for healthy eating and to improve home availability of healthy food options in programmes promoting healthy eating among adolescents.

THE GREEN BANK TELESCOPE MAPS THE DENSE, STAR-FORMING GAS IN THE NEARBY STARBURST GALAXY M82

International Nuclear Information System (INIS)

Kepley, Amanda A.; Frayer, David; Leroy, Adam K.; Usero, Antonio; Marvil, Josh; Walter, Fabian

2014-01-01

Observations of the Milky Way and nearby galaxies show that dense molecular gas correlates with recent star formation, suggesting that the formation of this gas phase may help regulate star formation. A key test of this idea requires wide-area, high-resolution maps of dense molecular gas in galaxies to explore how local physical conditions drive dense gas formation, but these observations have been limited because of the faintness of dense gas tracers like HCN and HCO + . Here we demonstrate the power of the Robert C. Byrd Green Bank Telescope (GBT)—the largest single-dish millimeter radio telescope—for mapping dense gas in galaxies by presenting the most sensitive maps yet of HCN and HCO + in the starburst galaxy M82. The HCN and HCO + in the disk of this galaxy correlates with both recent star formation and more diffuse molecular gas and shows kinematics consistent with a rotating torus. The HCO + emission extending to the north and south of the disk is coincident with the outflow previously identified in CO and traces the eastern edge of the hot outflowing gas. The central starburst region has a higher ratio of star formation to dense gas than the outer regions, pointing to the starburst as a key driver of this relationship. These results establish that the GBT can efficiently map the dense molecular gas at 90 GHz in nearby galaxies, a capability that will increase further with the 16 element feed array under construction

Dense ceramic membranes for methane conversion

Energy Technology Data Exchange (ETDEWEB)

Bouwmeester, Henny J.M. [Laboratory for Inorganic Materials Science, Department of Science and Technology and MESA Research Institute, University of Twente, 7500 AE Enschede (Netherlands)

2003-07-30

Dense ceramic membranes made from mixed oxygen-ionic and electronic conducting perovskite-related oxides allow separation of oxygen from an air supply at elevated temperatures (>700C). By combining air separation and catalytic partial oxidation of methane to syngas into a ceramic membrane reactor, this technology is expected to significantly reduce the capital costs of conversion of natural gas to liquid added-value products. The present survey is mainly concerned with the material properties that govern the performance of the mixed-conducting membranes in real operating conditions and highlights significant developments in the field.

Quasi-molecular processes in dense plasmas

International Nuclear Information System (INIS)

Younger, S.M.

1991-01-01

Quasi-molecular phenomena occur in dense plasmas when the interatomic spacing is comparable to the characteristic wavelength of the electrons. If the electronic states are bound, covalent orbitals arise with different excitation energies, radiative rates, and collisional rates than for isolated ions. For continuum electrons, charge localization near transient clusters of nuclei can influence many scattering and transport processes. We identify several novel consequences of quasi-molecular phenomena in plasmas and give a possible explanation of high energy features associated with helium-like emissions lines observed in recent inertial fusion experiments. 7 refs

Fluorescence and absorption spectroscopy for warm dense matter studies and ICF plasma diagnostics

Science.gov (United States)

Hansen, S. B.; Harding, E. C.; Knapp, P. F.; Gomez, M. R.; Nagayama, T.; Bailey, J. E.

2018-05-01

The burning core of an inertial confinement fusion (ICF) plasma produces bright x-rays at stagnation that can directly diagnose core conditions essential for comparison to simulations and understanding fusion yields. These x-rays also backlight the surrounding shell of warm, dense matter, whose properties are critical to understanding the efficacy of the inertial confinement and global morphology. We show that the absorption and fluorescence spectra of mid-Z impurities or dopants in the warm dense shell can reveal the optical depth, temperature, and density of the shell and help constrain models of warm, dense matter. This is illustrated by the example of a high-resolution spectrum collected from an ICF plasma with a beryllium shell containing native iron impurities. Analysis of the iron K-edge provides model-independent diagnostics of the shell density (2.3 × 1024 e/cm3) and temperature (10 eV), while a 12-eV red shift in Kβ and 5-eV blue shift in the K-edge discriminate among models of warm dense matter: Both shifts are well described by a self-consistent field model based on density functional theory but are not fully consistent with isolated-atom models using ad-hoc density effects.

Left ventricular strain and its pattern estimated from cine CMR and validation with DENSE

International Nuclear Information System (INIS)

Gao, Hao; Luo, Xiaoyu; Allan, Andrew; McComb, Christie; Berry, Colin

2014-01-01

Measurement of local strain provides insight into the biomechanical significance of viable myocardium. We attempted to estimate myocardial strain from cine cardiovascular magnetic resonance (CMR) images by using a b-spline deformable image registration method. Three healthy volunteers and 41 patients with either recent or chronic myocardial infarction (MI) were studied at 1.5 Tesla with both cine and DENSE CMR. Regional circumferential and radial left ventricular strains were estimated from cine and DENSE acquisitions. In all healthy volunteers, there was no difference for peak circumferential strain (− 0.18 ± 0.04 versus − 0.18 ± 0.03, p = 0.76) between cine and DENSE CMR, however peak radial strain was overestimated from cine (0.84 ± 0.37 versus 0.49 ± 0.2, p < 0.01). In the patient study, the peak strain patterns predicted by cine were similar to the patterns from DENSE, including the strain evolution related to recovery time and strain patterns related to MI scar extent. Furthermore, cine-derived strain disclosed different strain patterns in MI and non-MI regions, and regions with transmural and non-transmural MI as DENSE. Although there were large variations with radial strain measurements from cine CMR images, useful circumferential strain information can be obtained from routine clinical CMR imaging. Cine strain analysis has potential to improve the diagnostic yield from routine CMR imaging in clinical practice. (paper)

Dense Trajectories and DHOG for Classification of Viewpoints from Echocardiogram Videos

Directory of Open Access Journals (Sweden)

Liqin Huang

2016-01-01

Full Text Available In echo-cardiac clinical computer-aided diagnosis, an important step is to automatically classify echocardiography videos from different angles and different regions. We propose a kind of echocardiography video classification algorithm based on the dense trajectory and difference histograms of oriented gradients (DHOG. First, we use the dense grid method to describe feature characteristics in each frame of echocardiography sequence and then track these feature points by applying the dense optical flow. In order to overcome the influence of the rapid and irregular movement of echocardiography videos and get more robust tracking results, we also design a trajectory description algorithm which uses the derivative of the optical flow to obtain the motion trajectory information and associates the different characteristics (e.g., the trajectory shape, DHOG, HOF, and MBH with embedded structural information of the spatiotemporal pyramid. To avoid “dimension disaster,” we apply Fisher’s vector to reduce the dimension of feature description followed by the SVM linear classifier to improve the final classification result. The average accuracy of echocardiography video classification is 77.12% for all eight viewpoints and 100% for three primary viewpoints.

Monitoring of oil palm plantations and growth variations with a dense vegetation model

DEFF Research Database (Denmark)

Teng, Khar Chun; Koay, Jun Yi; Tey, Seng Heng

2014-01-01

The development of microwave remote sensing models for the monitoring of vegetation has received wide attention in recent years. For vegetation in the tropics, it is necessary to consider a dense medium model for the theoretical modelling of the microwave interaction with the vegetation medium....... In this paper, a multilayer model based on the radiative transfer theory for a dense vegetation medium is developed where the coherence effects and near field interaction effects of closely spaced leaves and branches are considered by incorporating the Dense Medium Phase and Amplitude Correction Theory (DM......-PACT) and Fresnel Phase Corrections. The iterative solutions of the radiative transfer model are computed with input based on ground truth measurements of physical parameters of oil palm plantations in the state of Perak, Malaysia, and compared with the SAR images obtained from RADARSAT2. Preliminary results...

Deterministic and unambiguous dense coding

International Nuclear Information System (INIS)

Wu Shengjun; Cohen, Scott M.; Sun Yuqing; Griffiths, Robert B.

2006-01-01

Optimal dense coding using a partially-entangled pure state of Schmidt rank D and a noiseless quantum channel of dimension D is studied both in the deterministic case where at most L d messages can be transmitted with perfect fidelity, and in the unambiguous case where when the protocol succeeds (probability τ x ) Bob knows for sure that Alice sent message x, and when it fails (probability 1-τ x ) he knows it has failed. Alice is allowed any single-shot (one use) encoding procedure, and Bob any single-shot measurement. For D≤D a bound is obtained for L d in terms of the largest Schmidt coefficient of the entangled state, and is compared with published results by Mozes et al. [Phys. Rev. A71, 012311 (2005)]. For D>D it is shown that L d is strictly less than D 2 unless D is an integer multiple of D, in which case uniform (maximal) entanglement is not needed to achieve the optimal protocol. The unambiguous case is studied for D≤D, assuming τ x >0 for a set of DD messages, and a bound is obtained for the average . A bound on the average requires an additional assumption of encoding by isometries (unitaries when D=D) that are orthogonal for different messages. Both bounds are saturated when τ x is a constant independent of x, by a protocol based on one-shot entanglement concentration. For D>D it is shown that (at least) D 2 messages can be sent unambiguously. Whether unitary (isometric) encoding suffices for optimal protocols remains a major unanswered question, both for our work and for previous studies of dense coding using partially-entangled states, including noisy (mixed) states

Plasma focus - dense Z pinch and their applications

International Nuclear Information System (INIS)

Ishii, Shozo

1986-02-01

''Workshop on the possibility of Z-pinch as a intense pulse light source'' in 1983 and ''Research meeting on plasma focus and Z-pinch'' in 1984 were held at Institute of Plasma Physics, Nagoya University under a collaborating research program. Research activities reported at the meetings on plasma focus, dense Z-pinch, and related phenomena are summerized. (author)

Appetitive and Dietary Effects of Consuming an Energy-Dense Food (Peanuts with or between Meals by Snackers and Nonsnackers

Directory of Open Access Journals (Sweden)

A. A. Devitt

2011-01-01

Full Text Available Background. Energy-dense foods are inconsistently implicated in elevated energy intake (EI. This may stem from other food properties and/or differences in dietary incorporation, that is, as snacks or with meals. Objective. Assess intake pattern and food properties on acute appetitive ratings (AR and EI. Design. 201 normal and overweight adults consuming a standard lunch. Test loads of 1255.2 kJ (300 kcal were added to the lunch or provided as snack. Loads (peanuts, snack mix, and snack mix with peanuts were energy, macronutrient, and volumetrically matched with a lunch portion as control. Participants completed meal and snack sessions of their randomly assigned load. Results. No differences were observed in daily EI or AR for meal versus snack or treatment versus control. Consumption of peanuts as a snack tended to strengthen dietary compensation compared to peanuts or other loads with a meal. Conclusions. Inclusion of an energy-dense food as a snack or meal component had comparable influence on AR and EI. Peanuts tended to elicit stronger dietary compensation when consumed as a snack versus with a meal. If substantiated, this latter observation suggests that properties other than those controlled here (energy, macronutrient content, and volume modify AR and EI.

Appetitive and Dietary Effects of Consuming an Energy-Dense Food (Peanuts) with or between Meals by Snackers and Nonsnackers.

Science.gov (United States)

Devitt, A A; Kuevi, A; Coelho, S B; Lartey, A; Lokko, P; Costa, N; Bressan, J; Mattes, R D

2011-01-01

Background. Energy-dense foods are inconsistently implicated in elevated energy intake (EI). This may stem from other food properties and/or differences in dietary incorporation, that is, as snacks or with meals. Objective. Assess intake pattern and food properties on acute appetitive ratings (AR) and EI. Design. 201 normal and overweight adults consuming a standard lunch. Test loads of 1255.2 kJ (300 kcal) were added to the lunch or provided as snack. Loads (peanuts, snack mix, and snack mix with peanuts) were energy, macronutrient, and volumetrically matched with a lunch portion as control. Participants completed meal and snack sessions of their randomly assigned load. Results. No differences were observed in daily EI or AR for meal versus snack or treatment versus control. Consumption of peanuts as a snack tended to strengthen dietary compensation compared to peanuts or other loads with a meal. Conclusions. Inclusion of an energy-dense food as a snack or meal component had comparable influence on AR and EI. Peanuts tended to elicit stronger dietary compensation when consumed as a snack versus with a meal. If substantiated, this latter observation suggests that properties other than those controlled here (energy, macronutrient content, and volume) modify AR and EI.

Carbon chemistry in dense molecular clouds: Theory and observational constraints

International Nuclear Information System (INIS)

Blake, G.A.

1990-01-01

For the most part, gas phase models of the chemistry of dense molecular clouds predict the abundances of simple species rather well. However, for larger molecules and even for small systems rich in carbon these models often fail spectacularly. Researchers present a brief review of the basic assumptions and results of large scale modeling of the carbon chemistry in dense molecular clouds. Particular attention is to the influence of the gas phase C/O ratio in molecular clouds, and the likely role grains play in maintaining this ratio as clouds evolve from initially diffuse objects to denser cores with associated stellar and planetary formation. Recent spectral line surveys at centimeter and millimeter wavelengths along with selected observations in the submillimeter have now produced an accurate inventory of the gas phase carbon budget in several different types of molecular clouds, though gaps in our knowledge clearly remain. The constraints these observations place on theoretical models of interstellar chemistry can be used to gain insights into why the models fail, and show also which neglected processes must be included in more complete analyses. Looking toward the future, larger molecules are especially difficult to study both experimentally and theoretically in such dense, cold regions, and some new methods are therefore outlined which may ultimately push the detectability of small carbon chains and rings to much heavier species

Binding of a cementum attachment protein to extracellular matrix components and to dental surfaces

Energy Technology Data Exchange (ETDEWEB)

Pitaru, S; Hekmati, H [Department of Oral Biology, Goldschleger School of Dental Medicine, Tel Aviv University (Israel); Savion, N [Goldschleger Eye Institute, Sackler School of Medicine, Tel Aviv University (Israel); Olsen, S; Narayanan, S A [Department of Pathology, School of Medicine, University of Washington, Seattle, Washington (United States)

1992-01-01

Cementum proteins (CP) have been shown to mediate cell attachment. Among these, a 55 kDa protein was isolated. The purpose of the present study was to assess the capacity of CP to bind to non-demineralized and demineralized root surfaces and to support cell attachment to dentin. CP were prepared by sequential extraction of bovine cementum with 25 mM EDTA, 0.5 M acetic acid followed by 4 M guanidine HCl. The latter was subjected to ion exchange chromatography on a DEAE-3SW column and eluted stepwise with a 0-0.5 M NaCl gradient. CP were labelled with [sup 125]I and the capacity of [sup 125]I-CP to bind to mineralized and partially demineralized dentin, synthetic hydroxyapatite, collagen, fibronectin and fibrillar collagen-fibronectin cimplex was assessed. It was found that CP bind specifically to mineralized dentin and synthetic hydroxyapatite but not to demineralized dentin. The specific binding was 60% of the total binding. SDS-PAGE analysis of the proteins bound to dentin indicated that the main bound protein had a molecular weight of 55 kDa. CP exhibited high affinity for fibronectin (k[sub D] = 1.56 x 10[sup -10] M) and fibronectincollagen complex, but their binding to either molecular or fibrillar collagen was negligible. It is suggested that CP may play an important role in the attachment of cells of the periodontium to cementum extracellular matrix during homeostasis and regeneration. (au).

Theory of ultra dense matter and the dynamics of high energy interactions involving nuclei

International Nuclear Information System (INIS)

Gyulassy, M.

1993-01-01

Progress in the areas of pQCD radiative processes in dense matter, QCD transport theories to describe the evolution of nonequilibrium phenomena in dense matter, and the development and testing of phenomenological models of high-energy nuclear collisions is summarized. The evolution of the total energy density of quarks and gluons with minijet initial conditions at RHIC energy is shown for Au+Au

Pharmaceutical production of nano particles using supercritical or dense gas technology

International Nuclear Information System (INIS)

Regtop, H.

2002-01-01

Full text: The primary aim of our proposed research is to develop pharmaceutical formulations with enhanced pharmacokinetics and increased bioavailability. The particular drug delivery systems of interest are, oral, aerosols, injectable and topical with well-recognised and distinct problems of bioavailability. More than 40% of all drugs in the USP or BP are insoluble or have some problem with solubility. It is estimated in 2000, the total combined sales of drugs that are insoluble or poorly soluble was US$37 billion. Precise and predictable drug delivery is made more possible by producing uniform micron size particles or powders, which can improve the efficiency and effectiveness of therapeutical formulations. Hence the purpose of micronisation is to increase bioavailability and also to allow other modes of administration, eg insulin is a protein, which is an injectable for the treatment of diabetes, but recently particles of 1-4 microns of insulin are in phase 3 clinical trials to deliver the drug to diabetics as an inhalant. In addition aerosolised drugs such as mucolytics, antibiotics, antiinflammatory drugs and hormones have recently been trailed. Finely powdered pharmaceuticals are however difficult to process by current techniques. In spray drying the operating temperatures are often too high for heat sensitive drugs. Thermal degradation of compounds can also be experienced in milling due to high rates of shear and requires high energy inputs and do not produce particles within a narrow range distribution. A relatively new technique which has been used and developed by Eiffel Technologies to produce uniform micron and sub micron size particles is a dense gas process in which the gas is used as an antisolvent to precipitate compounds from solution. Pharmaceutical processing with dense gas is relatively new and is an efficient process for producing high purity micronised particles with defined morphological structures and with a narrow size distribution rate

SN 1986J VLBI. IV. The Nature of the Central Component

Science.gov (United States)

Bietenholz, Michael F.; Bartel, Norbert

2017-12-01

We report on Very Large Array measurements between 1 and 45 GHz of the evolving radio spectral energy distribution (SED) of SN 1986J, made in conjunction with very long baseline interferometry (VLBI) imaging. The SED of SN 1986J is unique among supernovae, and shows an inversion point and a high-frequency turnover. Both are due to the central component seen in the VLBI images, and both are progressing downward in frequency with time. The optically thin spectral index of the central component is almost the same as that of the shell. We fit a simple model to the evolving SED consisting of an optically thin shell and a partly absorbed central component. The evolution of the SED is consistent with that of a homologously expanding system. Both components are fading, but the shell is fading more rapidly. We conclude that the central component is physically inside the expanding shell, and not a surface hotspot central only in projection. Our observations are consistent with the central component being due to interaction of the shock with the dense and highly structured circumstellar medium that resulted from a period of common-envelope evolution of the progenitor. However, a young pulsar-wind nebula or emission from an accreting black hole can also not be ruled out at this point.

THE GREEN BANK TELESCOPE MAPS THE DENSE, STAR-FORMING GAS IN THE NEARBY STARBURST GALAXY M82

Energy Technology Data Exchange (ETDEWEB)

Kepley, Amanda A.; Frayer, David [National Radio Astronomy Observatory, P.O. Box 2, Green Bank, WV 24944-0002 (United States); Leroy, Adam K. [National Radio Astronomy Observatory, 520 Edgemont Road, Charlottesville, VA 22903-2475 (United States); Usero, Antonio [Observatorio Astronómico Nacional, C/Alfonso XII, 3, E-28014 Madrid (Spain); Marvil, Josh [Department of Physics, New Mexico Tech., 801 Leroy Place, Socorro, NM 87801 (United States); Walter, Fabian, E-mail: akepley@nrao.edu [Max Planck Institute fur Astronomie, Königstuhl 17, D-69117 Heidelberg (Germany)

2014-01-01

Observations of the Milky Way and nearby galaxies show that dense molecular gas correlates with recent star formation, suggesting that the formation of this gas phase may help regulate star formation. A key test of this idea requires wide-area, high-resolution maps of dense molecular gas in galaxies to explore how local physical conditions drive dense gas formation, but these observations have been limited because of the faintness of dense gas tracers like HCN and HCO{sup +}. Here we demonstrate the power of the Robert C. Byrd Green Bank Telescope (GBT)—the largest single-dish millimeter radio telescope—for mapping dense gas in galaxies by presenting the most sensitive maps yet of HCN and HCO{sup +} in the starburst galaxy M82. The HCN and HCO{sup +} in the disk of this galaxy correlates with both recent star formation and more diffuse molecular gas and shows kinematics consistent with a rotating torus. The HCO{sup +} emission extending to the north and south of the disk is coincident with the outflow previously identified in CO and traces the eastern edge of the hot outflowing gas. The central starburst region has a higher ratio of star formation to dense gas than the outer regions, pointing to the starburst as a key driver of this relationship. These results establish that the GBT can efficiently map the dense molecular gas at 90 GHz in nearby galaxies, a capability that will increase further with the 16 element feed array under construction.

Planar simplification and texturing of dense point cloud maps

NARCIS (Netherlands)

Ma, L.; Whelan, T.; Bondarau, Y.; With, de P.H.N.; McDonald, J.

2013-01-01

Dense RGB-D based SLAM techniques and highfidelity LIDAR scanners are examples from an abundant set of systems capable of providing multi-million point datasets. These large datasets quickly become difficult to process and work with due to the sheer volume of data, which typically contains

Preparation and characterization of nanostructured ZrO2 coatings on dense and porous substrates

International Nuclear Information System (INIS)

Shi Jingyu; Verweij, Henk

2008-01-01

Nanostructured ZrO 2 coatings are prepared on both dense and porous substrates by wet-chemical deposition of non-agglomerated 5 nm precursor particle dispersions, followed by thermal processing. The precursor particle dispersions are made by modified emulsion precipitation and a purification treatment to remove reaction products and additives. The coatings are formed by depositing the precursor nanoparticle dispersion directly onto the substrate, followed by drying and heating at 600 deg. C. Scanning electron microscopy and cross-sectional transmission electron microscopy observations of the heat-treated coatings indicate that the ZrO 2 coating on dense Si wafer substrate has a homogeneous, dense particle packing structure with shallow meniscus-shaped depressions in the surface, and microcracks below the meniscus surface. On the other hand, coatings formed on a meso-porous γ-alumina membrane substrate are free of defects, but with a lower packing density. The mechanism of the substrate effect on the particle packing behavior and defect formation during coating deposition is discussed. It is expected that by using a thin porous substrate with reduced capillary force, a defect-free, homogenously dense-packed coating structure can be achieved

The dense plasma focus and nuclear energy. A possible path towards fuel-selfsufficiency

International Nuclear Information System (INIS)

Heindler, M.; Harms, A.A.

1983-01-01

This chapter examines the concept of incorporating a dense plasma focus device which supplies neutrons to breed fissile fuel for fission reactions in a nuclear energy system. Discusses the dense plasma focus in a fusion-fission symbiont concept; a parametric description of a DPF-based nuclear energy system; fissile fuel and energy balance in a DPF based symbiont; a fusion-fission symbiont with a DPF device of current design; and DPF facility requirements for a self-sufficient fusion-fission symbiont. The primary objective of this study was to establish a systems concept which is essentially self-sufficient with respect to nuclear fuel. Concludes that while existing dense plasma focus devices are insufficient and inadequate for such purpose, the improvement of some critical performance parameters (e.g., the pulse repetition rate and the neutron yield per pulse) could render a self-sufficient nuclear energy concept a nearterm technological objective

A Systematic Method of Interconnection Optimization for Dense-Array Concentrator Photovoltaic System

Science.gov (United States)

Siaw, Fei-Lu

2013-01-01

This paper presents a new systematic approach to analyze all possible array configurations in order to determine the most optimal dense-array configuration for concentrator photovoltaic (CPV) systems. The proposed method is fast, simple, reasonably accurate, and very useful as a preliminary study before constructing a dense-array CPV panel. Using measured flux distribution data, each CPV cells' voltage and current values at three critical points which are at short-circuit, open-circuit, and maximum power point are determined. From there, an algorithm groups the cells into basic modules. The next step is I-V curve prediction, to find the maximum output power of each array configuration. As a case study, twenty different I-V predictions are made for a prototype of nonimaging planar concentrator, and the array configuration that yields the highest output power is determined. The result is then verified by assembling and testing of an actual dense-array on the prototype. It was found that the I-V curve closely resembles simulated I-V prediction, and measured maximum output power varies by only 1.34%. PMID:24453823

A Systematic Method of Interconnection Optimization for Dense-Array Concentrator Photovoltaic System

Directory of Open Access Journals (Sweden)

Fei-Lu Siaw

2013-01-01

Full Text Available This paper presents a new systematic approach to analyze all possible array configurations in order to determine the most optimal dense-array configuration for concentrator photovoltaic (CPV systems. The proposed method is fast, simple, reasonably accurate, and very useful as a preliminary study before constructing a dense-array CPV panel. Using measured flux distribution data, each CPV cells’ voltage and current values at three critical points which are at short-circuit, open-circuit, and maximum power point are determined. From there, an algorithm groups the cells into basic modules. The next step is I-V curve prediction, to find the maximum output power of each array configuration. As a case study, twenty different I-V predictions are made for a prototype of nonimaging planar concentrator, and the array configuration that yields the highest output power is determined. The result is then verified by assembling and testing of an actual dense-array on the prototype. It was found that the I-V curve closely resembles simulated I-V prediction, and measured maximum output power varies by only 1.34%.

A systematic method of interconnection optimization for dense-array concentrator photovoltaic system.

Science.gov (United States)

Siaw, Fei-Lu; Chong, Kok-Keong

2013-01-01

This paper presents a new systematic approach to analyze all possible array configurations in order to determine the most optimal dense-array configuration for concentrator photovoltaic (CPV) systems. The proposed method is fast, simple, reasonably accurate, and very useful as a preliminary study before constructing a dense-array CPV panel. Using measured flux distribution data, each CPV cells' voltage and current values at three critical points which are at short-circuit, open-circuit, and maximum power point are determined. From there, an algorithm groups the cells into basic modules. The next step is I-V curve prediction, to find the maximum output power of each array configuration. As a case study, twenty different I-V predictions are made for a prototype of nonimaging planar concentrator, and the array configuration that yields the highest output power is determined. The result is then verified by assembling and testing of an actual dense-array on the prototype. It was found that the I-V curve closely resembles simulated I-V prediction, and measured maximum output power varies by only 1.34%.

Tools to Perform Local Dense 3D Reconstruction of Shallow Water Seabed

Directory of Open Access Journals (Sweden)

Loïca Avanthey

2016-05-01

Full Text Available Tasks such as distinguishing or identifying individual objects of interest require the production of dense local clouds at the scale of these individual objects of interest. Due to the physical and dynamic properties of an underwater environment, the usual dense matching algorithms must be rethought in order to be adaptive. These properties also imply that the scene must be observed at close range. Classic robotized acquisition systems are oversized for local studies in shallow water while the systematic acquisition of data is not guaranteed with divers. We address these two major issues through a multidisciplinary approach. To efficiently acquire on-demand stereoscopic pairs using simple logistics in small areas of shallow water, we devised an agile light-weight dedicated system which is easy to reproduce. To densely match two views in a reliable way, we devised a reconstruction algorithm that automatically accounts for the dynamics, variability and light absorption of the underwater environment. Field experiments in the Mediterranean Sea were used to assess the results.

Stark broadening in hot, dense laser-produced plasmas

International Nuclear Information System (INIS)

Tighe, R.J.; Hooper, C.F. Jr.

1976-01-01

Broadened Lyman-α x-ray lines from neon X and argon XVIII radiators, which are immersed in a hot, dense deuterium or deuterium-tritium plasma, are discussed. In particular, these lines are analyzed for several temperature-density cases, characteristic of laser-produced plasmas; special attention paid to the relative importance of ion, electron, and Doppler effects. Static ion microfield distribution functions are tabulated

Role of ultrasonography in detecting mammographically occult breast carcinoma in women with dense breasts.

Science.gov (United States)

Corsetti, V; Ferrari, A; Ghirardi, M; Bergonzini, R; Bellarosa, S; Angelini, O; Bani, C; Ciatto, S

2006-04-01

The purpose of this study was to assess the usefulness of routine ultrasonography in women with negative mammography and dense breasts [Breast Imaging Reporting and Data System (BIRADS D3-4)]. We applied a protocol involving routine ultrasonography in a consecutive series of subjects with negative mammography and dense breasts. After evaluation by internal and external reviewers of cancers detected by ultrasonography performed to confirm negative mammography, we determined the additional cancer detection rate of ultrasonography and the cost of the protocol. Out of 17,883 total mammographies, 167 cancers were diagnosed (detection rate: 0.93%). Out of 257 suspicious mammographies, 138 cancers were detected. Out of 17,626 negative mammographies, 6,449 (36.5%) were classified as "dense breast" and underwent ultrasonography: 29 cancers were detected (detection rate: 0.44%, or 17.3% of total cancers). Out of 25 cancer cases reviewed, negative mammography and asymptomatic status was confirmed in 15 (detection rate 0.23%, or 8.9% of total cancers). The cancer detection rate was 0.11%, 0.22%, 0.32% and 0.14% for age groups 59, respectively. The cost per additional carcinoma detected by ultrasonography alone was euro 25,847.85 whereas that per examined woman was euro 21.68. The study confirms the possibility that ultrasonography can detect mammographically occult breast carcinoma in dense breasts. The evidence is insufficient to recommend this policy in routine screening practice but suggests that, at least in current clinical practice, adding ultrasonography in dense breasts may be useful despite the substantial costs.

Dense Medium Plasma Water Purification Reactor (DMP WaPR), Phase I

Data.gov (United States)

National Aeronautics and Space Administration — The Dense Medium Plasma Water Purification Reactor offers significant improvements over existing water purification technologies used in Advanced Life Support...

Influence of Food Packaging on Children's Energy-dense Snack ...

International Development Research Centre (IDRC) Digital Library (Canada)

Childhood obesity is a major global public health concern. Rates of obese and overweight children have increased in low- and middle-income countries such as Guatemala. This research will study the influence of food packaging on Guatemalan preschool and school-aged children's energy-dense snack (EDS) food ...

The Magpie dense z-pinch project

International Nuclear Information System (INIS)

Chittenden, J.; Choi, P.; Mitchell, I.; Dangor, A.E.; Haines, M.G.

1990-01-01

The authors present a design study on the Mega Ampere Generator for Plasma Implosion Experiments (MAGPIE), a project currently under construction at Imperial College London, to study radiative collapse of a dense Z-pinch plasma created from a 20 um diameter cryogenic hydrogen fiber. The 2 TW generator is composed of four individual 2.4 MV Marx banks of the HERMES III type design with a maximum stored energy of 336 kJ. They drive four 5 ohm Pulse Forming Lines which are combined into a single 1.25 MA in 150 ns to a 150 nH load

Dense hydrogen plasma: Comparison between models

International Nuclear Information System (INIS)

Clerouin, J.G.; Bernard, S.

1997-01-01

Static and dynamical properties of the dense hydrogen plasma (ρ≥2.6gcm -3 , 0.1< T<5eV) in the strongly coupled regime are compared through different numerical approaches. It is shown that simplified density-functional molecular-dynamics simulations (DFMD), without orbitals, such as Thomas-Fermi Dirac or Thomas-Fermi-Dirac-Weiszaecker simulations give similar results to more sophisticated descriptions such as Car-Parrinello (CP), tight binding, or path-integral Monte Carlo, in a wide range of temperatures. At very low temperature, screening effects predicted by DFMD are still less pronounced than CP simulations. copyright 1997 The American Physical Society

Modeling virtualized downlink cellular networks with ultra-dense small cells

KAUST Repository

Ibrahim, Hazem; Elsawy, Hesham; Nguyen, Uyen T.; Alouini, Mohamed-Slim

2015-01-01

-to-interference-plus-noise-ratio (SINR) performance, hence, increases the spatial spectral efficiency and improves the overall network performance. However, control signaling in such dense networks consumes considerable bandwidth and limits the densification gain. Radio access network

Bayesian quantification of thermodynamic uncertainties in dense gas flows

International Nuclear Information System (INIS)

Merle, X.; Cinnella, P.

2015-01-01

A Bayesian inference methodology is developed for calibrating complex equations of state used in numerical fluid flow solvers. Precisely, the input parameters of three equations of state commonly used for modeling the thermodynamic behavior of the so-called dense gas flows, – i.e. flows of gases characterized by high molecular weights and complex molecules, working in thermodynamic conditions close to the liquid–vapor saturation curve – are calibrated by means of Bayesian inference from reference aerodynamic data for a dense gas flow over a wing section. Flow thermodynamic conditions are such that the gas thermodynamic behavior strongly deviates from that of a perfect gas. In the aim of assessing the proposed methodology, synthetic calibration data – specifically, wall pressure data – are generated by running the numerical solver with a more complex and accurate thermodynamic model. The statistical model used to build the likelihood function includes a model-form inadequacy term, accounting for the gap between the model output associated to the best-fit parameters and the true phenomenon. Results show that, for all of the relatively simple models under investigation, calibrations lead to informative posterior probability density distributions of the input parameters and improve the predictive distribution significantly. Nevertheless, calibrated parameters strongly differ from their expected physical values. The relationship between this behavior and model-form inadequacy is discussed. - Highlights: • Development of a Bayesian inference procedure for calibrating dense-gas flow solvers. • Complex thermodynamic models calibrated by using aerodynamic data for the flow. • Preliminary Sobol analysis used to reduce parameter space. • Piecewise polynomial surrogate model constructed to reduce computational cost. • Calibration results show the crucial role played by model-form inadequacies

Detecting Stems in Dense and Homogeneous Forest Using Single-Scan TLS

Directory of Open Access Journals (Sweden)

Shaobo Xia

2015-10-01

Full Text Available Stem characteristics of plants are of great importance to both ecology study and forest management. Terrestrial laser scanning (TLS may provide an effective way to characterize the fine-scale structures of vegetation. However, clumping plants, dense foliage and thin structure could intensify the shadowing effect and pose a series of problems in identifying stems, distinguishing neighboring stems, and merging disconnected stem parts in point clouds. This paper presents a new method to automatically detect stems in dense and homogeneous forest using single-scan TLS data. Stem points are first identified with a two-scale classification method. Then a clustering approach is used to group the candidate stem points. Finally, a direction-growing algorithm based on a simple stem curve model is applied to merge stem points. Field experiments were carried out in two different bamboo plots with a stem density of about 7500 stems/ha. Overall accuracy of the stem detection is 88% and the quality of detected stems is mainly affected by the shadowing effect. Results indicate that the proposed method is feasible and effective in detection of bamboo stems using TLS data, and can be applied to other species of single-stem plants in dense forests.

MITIGATION SCENARIOS FOR RESIDENTIAL FIRES IN DENSELY POPULATED URBAN SETTLEMENTS IN SUKAHAJI VILLAGE, BANDUNG CITY

Directory of Open Access Journals (Sweden)

Saut Aritua Hasiholan Sagala

2016-10-01

Full Text Available Residential fires are a form of disaster that often occurs in urban areas especially in densely populated settlements. This study looks at possible mitigation scenarios for this kind of disaster. A case study was conducted in Babakan Ciparay Sub-District in Bandung City, among the densely populated settlements, and was focused especially on Sukahaji Village, a sub-unit of Babakan Ciparay, which is the most densely populated village in Bandung City with up to 234.14 people/ha. There have been six structural fires recorded from 2007 until 2010 occurring in Sukahaji. This study applied stratified random sampling as the preferred sampling technique and data collection method from a total population of 3,227 buildings. The data was then examined using risk analysis. The results have led to two intervention measures suggested as mitigation scenarios for residential fires that can be applied within the Sukahaji Village. The study concludes that mitigation measures through strengthening community capacity can be the principal option in reducing risk to fires in densely populated urban settlements.

The effect of playing advergames that promote energy-dense snacks or fruit on actual food intake among children.

Science.gov (United States)

Folkvord, Frans; Anschütz, Doeschka J; Buijzen, Moniek; Valkenburg, Patti M

2013-02-01

Previous studies have focused on the effects of television advertising on the energy intake of children. However, the rapidly changing food-marketing landscape requires research to measure the effects of nontraditional forms of marketing on the health-related behaviors of children. The main aim of this study was to examine the effect of advergames that promote energy-dense snacks or fruit on children's ad libitum snack and fruit consumption and to examine whether this consumption differed according to brand and product type (energy-dense snacks and fruit). The second aim was to examine whether advergames can stimulate fruit intake. We used a randomized between-subject design with 270 children (age: 8-10 y) who played an advergame that promoted energy-dense snacks (n = 69), fruit (n = 67), or nonfood products (n = 65) or were in the control condition (n = 69). Subsequently, we measured the free intake of energy-dense snacks and fruit. The children then completed questionnaire measures, and we weighed and measured them. The main finding was that playing an advergame containing food cues increased general energy intake, regardless of the advertised brand or product type (energy-dense snacks or fruit), and this activity particularly increased the intake of energy-dense snack foods. Children who played the fruit version of the advergame did not eat significantly more fruit than did those in the other groups. The findings suggest that playing advergames that promote food, including either energy-dense snacks or fruit, increases energy intake in children.

Identification of Neuregulin-2 as a novel stress granule component.

Science.gov (United States)

Kim, Jin Ah; Jayabalan, Aravinth Kumar; Kothandan, Vinoth Kumar; Mariappan, Ramesh; Kee, Younghoon; Ohn, Takbum

2016-08-01

Stress Granules (SGs) are microscopically visible, phase dense aggregates of translationally stalled messenger ribonucleoprotein (mRNP) complexes formed in response to distinct stress conditions. It is generally considered that SG formation is induced to protect cells from conditions of stress. The precise constituents of SGs and the mechanism through which SGs are dynamically regulated in response to stress are not completely understood. Hence, it is important to identify proteins which regulate SG assembly and disassembly. In the present study, we report Neuregulin-2 (NRG2) as a novel component of SGs; furthermore, depletion of NRG2 potently inhibits SG formation. We also demonstrate that NRG2 specifically localizes to SGs under various stress conditions. Knockdown of NRG2 has no effect on stress-induced polysome disassembly, suggesting that the component does not influence early step of SG formation. It was also observed that reduced expression of NRG2 led to marginal increase in cell survival under arsenite-induced stress. [BMB Reports 2016; 49(8): 449-454].

Dense and accurate whole-chromosome haplotyping of individual genomes

NARCIS (Netherlands)

Porubsky, David; Garg, Shilpa; Sanders, Ashley D.; Korbel, Jan O.; Guryev, Victor; Lansdorp, Peter M.; Marschall, Tobias

2017-01-01

The diploid nature of the human genome is neglected in many analyses done today, where a genome is perceived as a set of unphased variants with respect to a reference genome. This lack of haplotype-level analyses can be explained by a lack of methods that can produce dense and accurate

Propagation of monochromatic light in a hot and dense medium

Science.gov (United States)

Masood, Samina S.

2017-12-01

Photons, as quanta of electromagnetic fields, determine the electromagnetic properties of an extremely hot and dense medium. Considering the properties of the photons in the interacting medium of charged particles, we explicitly calculate the electromagnetic properties such as the electric permittivity, magnetic permeability, refractive index and the propagation speed of electromagnetic signals in an extremely hot and dense background. Photons acquire a dynamically generated mass in such a medium. The screening mass of the photon, the Debye shielding length and the plasma frequency are calculated as functions of the statistical parameters of the medium. We study the properties of the propagating particles in astrophysical systems of distinct statistical conditions. The modifications in the properties of the medium lead to the equation of state of the system. We mainly calculate all these parameters for extremely high temperatures of the early universe.

Propagation of monochromatic light in a hot and dense medium

Energy Technology Data Exchange (ETDEWEB)

Masood, Samina S. [University of Houston Clear Lake, Department of Physical and Applied Sciences, Houston, TX (United States)

2017-12-15

Photons, as quanta of electromagnetic fields, determine the electromagnetic properties of an extremely hot and dense medium. Considering the properties of the photons in the interacting medium of charged particles, we explicitly calculate the electromagnetic properties such as the electric permittivity, magnetic permeability, refractive index and the propagation speed of electromagnetic signals in an extremely hot and dense background. Photons acquire a dynamically generated mass in such a medium. The screening mass of the photon, the Debye shielding length and the plasma frequency are calculated as functions of the statistical parameters of the medium. We study the properties of the propagating particles in astrophysical systems of distinct statistical conditions. The modifications in the properties of the medium lead to the equation of state of the system. We mainly calculate all these parameters for extremely high temperatures of the early universe. (orig.)

Leaf Potential Productivity at Different Canopy Levels in Densely-planted and Intermediately-thinned Apple Orchards

Directory of Open Access Journals (Sweden)

Ying SUN

2016-07-01

Full Text Available Most apple orchards in the apple production districts in China were densely planted with vigorous rootstocks during the 1980s. These orchards have suffered micro-environmental deterioration and loss of fruit quality because of the closed canopy. Modification of the densely-planted orchards is a priority in current apple production. Intermediate thinning is a basic technique used to transform densely-planted apple orchards in China. Our goal was to provide theoretical basis for studying the effect of thinning on the efficiency of photosynthetically active radiation (PAR, fruit quality, and yield. We measured leaf area, solar radiation, and leaf air exchange at different tree canopy levels and by fitting relevant photosynthetic models, vertical distribution characteristics of leaf photosynthetic potentials and PAR were analyzed in various levels within canopies in densely-planted and intermediately-thinned orchards. Intermediate thinning significantly improved the radiant environment inside the canopies. PAR distribution within the canopies in the intermediately-thinned orchard was better distributed than in the densely-planted orchards. The invalid space under 30.0% of relative photosynthetically active radiation (PARr was nearly zero in the intermediately-thinned orchard; but minimum PARr was 17.0% and the space under 0.30 of the relative height of the canopy was invalid for photosynthesis in the densely-planted orchard. The leaf photosynthetic efficiency in the intermediately-thinned orchard was improved. Photosynthetic rates (Pn at the middle and bottom levels of the canopy, respectively, were increased by 7.80% and 10.20% in the intermediately-thinned orchard. Leaf development, which influences photosynthetic potential, was closely related to the surrounding micro-environment, especially light. Leaf photosynthetic potentials were correlated with leaf nitrogen content (Nl and specific leaf weight (Ml at various levels of canopies. Compared

Fabrication and characterization of powder metallurgy tantalum components prepared by high compaction pressure technique

Energy Technology Data Exchange (ETDEWEB)

Kim, Youngmoo [Department of Materials Science and Engineering, Korea Advanced Institute of Science and Technology, 291 Daehak-ro, Yuseong-gu, Daejeon 34141 (Korea, Republic of); Agency for Defense Development, Yuseong, P.O. Box 35, Yuseong-gu, Daejeon 34186, Republic of Korea. (Korea, Republic of); Lee, Dongju [Korea Atomic Energy Research Institute, 111 Daedeok-daero, Yuseong-gu, Daejeon 34057 (Korea, Republic of); Hwang, Jaewon [Samsung Electronics, 129 Samsung-ro, Youngtong-gu, Suwon 16677 (Korea, Republic of); Ryu, Ho Jin, E-mail: hojinryu@kaist.ac.kr [Department of Nuclear and Quantum Engineering, Korea Advanced Institute of Science and Technology, 291 Daehak-ro, Yuseong-gu, Daejeon 34141 (Korea, Republic of); Hong, Soon Hyung, E-mail: shhong@kaist.ac.kr [Department of Materials Science and Engineering, Korea Advanced Institute of Science and Technology, 291 Daehak-ro, Yuseong-gu, Daejeon 34141 (Korea, Republic of)

2016-04-15

The present study has investigated the consolidation behaviors of tantalum powders during compaction and sintering, and the characteristics of sintered components. For die compaction, the densification behaviors of the powders are simulated by finite element analyses based on the yield function proposed by Shima and Oyane. Accordingly, the green density distribution for coarser particles is predicted to be more uniform because they exhibits higher initial relative tap density owing to lower interparticle friction. It is also found that cold isostatic pressing is capable of producing higher dense compacts compared to the die pressing. However, unlike the compaction behavior, the sintered density of smaller particles is found to be higher than those of coarser ones owing to their higher specific surface area. The maximum sintered density was found to be 0.96 of theoretical density where smaller particles were pressed isostatically at 400 MPa followed by sintering at 2000 °C. Moreover, the effects of processing conditions on grain size and texture were also investigated. The average grain size of the sintered specimen is 30.29 μm and its texture is less than 2 times random intensity. Consequently, it is concluded that the higher pressure compaction technique is beneficial to produce high dense and texture-free tantalum components compared to hot pressing and spark plasma sintering. - Highlights: • Higher Ta density is obtained from higher pressure and sintering temperature. • High compaction method enables P/M Ta to achieve the density of 16.00 g·cm{sup −3}. • A P/M Ta component with fine microstructure and random orientation is developed.

The EOS and neutrino interactions in dense matter

Energy Technology Data Exchange (ETDEWEB)

Prakash, M; Reddy, S [Dept. of Physics and Astronomy, SUNY at Stony Brook, Stony Brook, NY (United States)

1998-06-01

The deleptonization and cooling times of a newly born neutron star depend on the equation of state (EOS) and neutrino opacities in dense matter. Through model calculations we show that effects of Pauli blocking and many-body correlations due to strong interactions reduce both the neutral and charged current neutrino cross sections by large factors compared to the case in which these effects are ignored. (orig.)

Vortex structures in dense electron-positron-ion plasmas

Energy Technology Data Exchange (ETDEWEB)

Haque, Q [Theoretical Plasma Physics Division, PINSTECH, P O Nilore, Islamabad (Pakistan)], E-mail: qamar_haque@hotmail.com

2009-11-15

A linear dispersion relation for electrostatic quantum drift and acoustic waves has been found for dense electron-positron-ion magnetoplasmas. Both the fermion and thermal temperature effects have been considered for electrons and positrons. In the nonlinear regime, a stationary solution in the form of dipolar vortices has been obtained. For illustration, the results were applied to the astrophysical plasma of the atmosphere of neutron stars/pulsars.

Aberrant distribution patterns of corneodesmosomal components of tape-stripped corneocytes in atopic dermatitis and related skin conditions (ichthyosis vulgaris, Netherton syndrome and peeling skin syndrome type B).

Science.gov (United States)

Igawa, Satomi; Kishibe, Mari; Honma, Masaru; Murakami, Masamoto; Mizuno, Yuki; Suga, Yasushi; Seishima, Mariko; Ohguchi, Yuka; Akiyama, Masashi; Hirose, Kenji; Ishida-Yamamoto, Akemi; Iizuka, Hajime

2013-10-01

Atopic dermatitis (AD), Netherton syndrome (NS) and peeling skin syndrome type B (PSS) may show some clinical phenotypic overlap. Corneodesmosomes are crucial for maintaining stratum corneum integrity and the components' localization can be visualized by immunostaining tape-stripped corneocytes. In normal skin, they are detected at the cell periphery. To determine whether AD, NS, PSS and ichthyosis vulgaris (IV) have differences in the corneodesmosomal components' distribution and corneocytes surface areas. Corneocytes were tape-stripped from a control group (n=12) and a disease group (37 AD cases, 3 IV cases, 4 NS cases, and 3 PSS cases), and analyzed with immunofluorescent microscopy. The distribution patterns of corneodesmosomal components: desmoglein 1, corneodesmosin, and desmocollin 1 were classified into four types: peripheral, sparse diffuse, dense diffuse and partial diffuse. Corneocyte surface areas were also measured. The corneodesmosome staining patterns were abnormal in the disease group. Other than in the 3 PSS cases, all three components showed similar patterns in each category. In lesional AD skin, the dense diffuse pattern was prominent. A high rate of the partial diffuse pattern, loss of linear cell-cell contacts, and irregular stripping manners were unique to NS. Only in PSS was corneodesmosin staining virtually absent. The corneocyte surface areas correlated significantly with the rate of combined sparse and dense diffuse patterns of desmoglein 1. This method may be used to assess abnormally differentiated corneocytes in AD and other diseases tested. In PSS samples, tape stripping analysis may serve as a non-invasive diagnostic test. Copyright © 2013 Japanese Society for Investigative Dermatology. Published by Elsevier Ireland Ltd. All rights reserved.

Mercury's Densely Cratered Surface

Science.gov (United States)

1974-01-01

Mariner 10 took this picture (FDS 27465) of the densely cratered surface of Mercury when the spacecraft was 18,200 kilometers (8085 miles) from the planet on March 29. The dark line across top of picture is a 'dropout' of a few TV lines of data. At lower left, a portion of a 61 kilometer (38 mile) crater shows a flow front extending across the crater floor and filling more than half of the crater. The smaller, fresh crater at center is about 25 kilometers (15 miles) in diameter. Craters as small as one kilometer (about one-half mile) across are visible in the picture.The Mariner 10 mission, managed by the Jet Propulsion Laboratory for NASA's Office of Space Science, explored Venus in February 1974 on the way to three encounters with Mercury-in March and September 1974 and in March 1975. The spacecraft took more than 7,000 photos of Mercury, Venus, the Earth and the Moon.Image Credit: NASA/JPL/Northwestern University

Dense medium ore concentrates of Bois-Noirs; Minerais des bois noirs, concentres de milieu dense

Energy Technology Data Exchange (ETDEWEB)

Le Bris, J; Leduc, M

1959-01-20

The chemical treatment of uranium concentrates of Bois-Noirs ore obtained by heavy medium are discussed. The first part deals with sulfuric acid attack on the concentrate, and the second part with the separation of the solution from residues by filtration. A third part deals with this separation by decantation. The fourth part deals with the carbonation of the pickling solutions obtained. (author) [French] Le present rapport est relatif a l'etude du traitement chimique de concentres uraniferes de minerais des Bois-Noirs obtenus par milieu dense. Une premiere partie est consacree a l'attaque sulfurique des concentres, une deuxieme partie a Ia separation de Ia solution d'attaque des residus par decantation. Une quatrieme partie a la carbonatation des solutions d'attaque obtenues. (auteur)

The Correlation Characteristics of Polarization Backscattering Matrix of Dense Chaff Clouds

Directory of Open Access Journals (Sweden)

B. Tang

2018-04-01

Full Text Available This paper studied the correlation characteristics of the polarization backscattering matrix of the dense chaff cloud with uniform orientation and location distributions in circular symmetry region. Based on the theoretical analysis and numerical experiments, the correlation coefficients of the four elements in the polarization backscattering matrix are obtained, and the results indicate that the cross to co-polar correlation coefficient is still zero; and that the sum of the co-polar cross-correlation coefficient and the two times of linear depolarization ratio equals one. The results are beneficial for better understanding of the backscattering characteristics of dense chaff clouds, and are useful in the application of jamming recognition in radar electronic warfare. Numerical experiments are performed by using the method of moments.

Numerical Simulation on Dense Packing of Granular Materials by Container Oscillation

Directory of Open Access Journals (Sweden)

Jun Liu

2013-01-01

Full Text Available The packing of granular materials is a basic and important problem in geomechanics. An approach, which generates dense packing of spheres confined in cylindrical and cuboidal containers in three steps, is introduced in this work. A loose packing structure is first generated by means of a reference lattice method. Then a dense packing structure is obtained in a container by simulating dropping of particles under gravitational forces. Furthermore, a scheme that makes the bottom boundary fluctuate up and down was applied to obtain more denser packing. The discrete element method (DEM was employed to simulate the interactions between particle-particle and particle-boundary during the particles' motions. Finally, two cases were presented to indicate the validity of the method proposed in this work.

Novel OSNR Monitoring Technique in Dense WDM Systems using Inherently Generated CW Monitoring Channels

DEFF Research Database (Denmark)

Petersen, Martin Nordal

2007-01-01

We present a simple, yet effective OSNR monitoring technique based on an inherent effect in the optical modulator. Highly accurate OSNR monitoring is demonstrated in a 40 Gb/s dense WDM system with 50 GHz channel spacing.......We present a simple, yet effective OSNR monitoring technique based on an inherent effect in the optical modulator. Highly accurate OSNR monitoring is demonstrated in a 40 Gb/s dense WDM system with 50 GHz channel spacing....

Imaging Three-Dimensional Myocardial Mechanics Using Navigator-gated Volumetric Spiral Cine DENSE MRI

Science.gov (United States)

Zhong, Xiaodong; Spottiswoode, Bruce S.; Meyer, Craig H.; Kramer, Christopher M.; Epstein, Frederick H.

2010-01-01

A navigator-gated 3D spiral cine displacement encoding with stimulated echoes (DENSE) pulse sequence for imaging 3D myocardial mechanics was developed. In addition, previously-described 2D post-processing algorithms including phase unwrapping, tissue tracking, and strain tensor calculation for the left ventricle (LV) were extended to 3D. These 3D methods were evaluated in 5 healthy volunteers, using 2D cine DENSE and historical 3D myocardial tagging as reference standards. With an average scan time of 20.5 ± 5.7 minutes, 3D data sets with a matrix size of 128 × 128 × 22, voxel size of 2.8 × 2.8 × 5.0 mm3, and temporal resolution of 32 ms were obtained with displacement encoding in three orthogonal directions. Mean values for end-systolic mid-ventricular mid-wall radial, circumferential, and longitudinal strain were 0.33 ± 0.10, −0.17 ± 0.02, and −0.16 ± 0.02, respectively. Transmural strain gradients were detected in the radial and circumferential directions, reflecting high spatial resolution. Good agreement by linear correlation and Bland-Altman analysis was achieved when comparing normal strains measured by 2D and 3D cine DENSE. Also, the 3D strains, twist, and torsion results obtained by 3D cine DENSE were in good agreement with historical values measured by 3D myocardial tagging. PMID:20574967

High-Throughput Image Analysis of Fibrillar Materials: A Case Study on Polymer Nanofiber Packing, Alignment, and Defects in Organic Field Effect Transistors.

Science.gov (United States)

Persson, Nils E; Rafshoon, Joshua; Naghshpour, Kaylie; Fast, Tony; Chu, Ping-Hsun; McBride, Michael; Risteen, Bailey; Grover, Martha; Reichmanis, Elsa

2017-10-18

High-throughput discovery of process-structure-property relationships in materials through an informatics-enabled empirical approach is an increasingly utilized technique in materials research due to the rapidly expanding availability of data. Here, process-structure-property relationships are extracted for the nucleation, growth, and deposition of semiconducting poly(3-hexylthiophene) (P3HT) nanofibers used in organic field effect transistors, via high-throughput image analysis. This study is performed using an automated image analysis pipeline combining existing open-source software and new algorithms, enabling the rapid evaluation of structural metrics for images of fibrillar materials, including local orientational order, fiber length density, and fiber length distributions. We observe that microfluidic processing leads to fibers that pack with unusually high density, while sonication yields fibers that pack sparsely with low alignment. This is attributed to differences in their crystallization mechanisms. P3HT nanofiber packing during thin film deposition exhibits behavior suggesting that fibers are confined to packing in two-dimensional layers. We find that fiber alignment, a feature correlated with charge carrier mobility, is driven by increasing fiber length, and that shorter fibers tend to segregate to the buried dielectric interface during deposition, creating potentially performance-limiting defects in alignment. Another barrier to perfect alignment is the curvature of P3HT fibers; we propose a mechanistic simulation of fiber growth that reconciles both this curvature and the log-normal distribution of fiber lengths inherent to the fiber populations under consideration.

Dense gas dispersion in the atmosphere

Energy Technology Data Exchange (ETDEWEB)

Nielsen, Morten

1998-09-01

Dense gas dispersion is characterized by buoyancy induced gravity currents and reduction of the vertical mixing. Liquefied gas releases from industrial accidents are cold because of the heat of evaporation which determines the density for a given concentration and physical properties. The temperature deficit is moderated by the heat flux from the ground, and this convection is an additional source of turbulence which affects the mixing. A simple model as the soil heat flux is used to estimate the ability of the ground to sustain the heat flux during release. The initial enthalpy, release rate, initial entrainment and momentum are discussed for generic source types and the interaction with obstacles is considered. In the MTH project BA experiments source with and without momentum were applied. The continuously released propane gas passed a two-dimensional removable obstacle perpendicular to the wind direction. Ground-level gas concentrations and vertical profiles of concentration, temperature, wind speed and turbulence were measured in front of and behind the obstacle. Ultrasonic anemometers providing fast velocity and concentration signals were mounted at three levels on the masts. The observed turbulence was influenced by the stability and the initial momentum of the jet releases. Additional information were taken from the `Dessert tortoise` ammonia jet releases, from the `Fladis` experiment with transition from dense to passive dispersion, and from the `Thorney Island` continuous releases of isothermal freon mixtures. The heat flux was found to moderate the negative buoyancy in both the propane and ammonia experiments. The heat flux measurements are compared to an estimate by analogy with surface layer theory. (au) 41 tabs., 146 ills., 189 refs.

An Adaptive Channel Access Method for Dynamic Super Dense Wireless Sensor Networks.

Science.gov (United States)

Lei, Chunyang; Bie, Hongxia; Fang, Gengfa; Zhang, Xuekun

2015-12-03

Super dense and distributed wireless sensor networks have become very popular with the development of small cell technology, Internet of Things (IoT), Machine-to-Machine (M2M) communications, Vehicular-to-Vehicular (V2V) communications and public safety networks. While densely deployed wireless networks provide one of the most important and sustainable solutions to improve the accuracy of sensing and spectral efficiency, a new channel access scheme needs to be designed to solve the channel congestion problem introduced by the high dynamics of competing nodes accessing the channel simultaneously. In this paper, we firstly analyzed the channel contention problem using a novel normalized channel contention analysis model which provides information on how to tune the contention window according to the state of channel contention. We then proposed an adaptive channel contention window tuning algorithm in which the contention window tuning rate is set dynamically based on the estimated channel contention level. Simulation results show that our proposed adaptive channel access algorithm based on fast contention window tuning can achieve more than 95 % of the theoretical optimal throughput and 0 . 97 of fairness index especially in dynamic and dense networks.

An Adaptive Channel Access Method for Dynamic Super Dense Wireless Sensor Networks

Directory of Open Access Journals (Sweden)

Chunyang Lei

2015-12-01

Full Text Available Super dense and distributed wireless sensor networks have become very popular with the development of small cell technology, Internet of Things (IoT, Machine-to-Machine (M2M communications, Vehicular-to-Vehicular (V2V communications and public safety networks. While densely deployed wireless networks provide one of the most important and sustainable solutions to improve the accuracy of sensing and spectral efficiency, a new channel access scheme needs to be designed to solve the channel congestion problem introduced by the high dynamics of competing nodes accessing the channel simultaneously. In this paper, we firstly analyzed the channel contention problem using a novel normalized channel contention analysis model which provides information on how to tune the contention window according to the state of channel contention. We then proposed an adaptive channel contention window tuning algorithm in which the contention window tuning rate is set dynamically based on the estimated channel contention level. Simulation results show that our proposed adaptive channel access algorithm based on fast contention window tuning can achieve more than 95 % of the theoretical optimal throughput and 0 . 97 of fairness index especially in dynamic and dense networks.

The influence of socioeconomic factors and family context on energy-dense food consumption among 2-year-old children.

Science.gov (United States)

Vilela, S; Oliveira, A; Pinto, E; Moreira, P; Barros, H; Lopes, C

2015-01-01

Adverse effect on health has been described for a high consumption of energy-dense food, among children and adults. Limited research has been performed among pre-school children. The objective of this study is to evaluate the association between socioeconomic characteristics and family structure, and the consumption of energy-dense food among 2-year-old children. The study sample includes 808 2-year-old children from the Portuguese birth cohort Generation XXI with information on food consumption. Data were obtained from questionnaires administered by interviewers to parents. Based on a food frequency questionnaire, four groups of energy-dense food were defined: soft drinks (sweetened drinks), sweets (chocolate and candies), cakes (creamy and not creamy cakes and sweet pastry) and salty snacks (crisps, pizza and burger). Multinomial logistic regression models (odds ratio and 95% confidence intervals) were fitted to estimate the associations. Intakes of energy-dense food were much lower than in similar aged children in other Westernized countries. Maternal age and education, grandparents' education, household income and maternal occupation were inversely associated with the consumption of energy-dense food, particularly soft drinks and sweets. Children with older siblings were more likely to have a daily consumption of any energy-dense food. Few significant associations were found between socioeconomic characteristics and family structure and consumption of cakes and sweets less than once a week. High socioeconomic characteristics were associated with lower consumption of energy-dense food by 2-year-old children, mainly soft drinks and sweets. This influence is not only from parents' background but also from the preceding generations.

Fabrication of dense panels in lithium fluoride

International Nuclear Information System (INIS)

Farcy, P.; Roger, J.; Pointud, R.

1958-04-01

The authors report a study aimed at the fabrication of large and dense lithium fluoride panels. This sintered lithium fluoride is then supposed to be used for the construction of barriers of protection against a flow of thermal neutrons. They briefly present the raw material which is used under the form of chamotte obtained through a pre-sintering process which is also described. Grain size measurements and sample preparation are indicated. Shaping, drying, and thermal treatment are briefly described, and characteristics of the sintered product are indicated

Parallel Access of Out-Of-Core Dense Extendible Arrays

Energy Technology Data Exchange (ETDEWEB)

Otoo, Ekow J; Rotem, Doron

2007-07-26

Datasets used in scientific and engineering applications are often modeled as dense multi-dimensional arrays. For very large datasets, the corresponding array models are typically stored out-of-core as array files. The array elements are mapped onto linear consecutive locations that correspond to the linear ordering of the multi-dimensional indices. Two conventional mappings used are the row-major order and the column-major order of multi-dimensional arrays. Such conventional mappings of dense array files highly limit the performance of applications and the extendibility of the dataset. Firstly, an array file that is organized in say row-major order causes applications that subsequently access the data in column-major order, to have abysmal performance. Secondly, any subsequent expansion of the array file is limited to only one dimension. Expansions of such out-of-core conventional arrays along arbitrary dimensions, require storage reorganization that can be very expensive. Wepresent a solution for storing out-of-core dense extendible arrays that resolve the two limitations. The method uses a mapping function F*(), together with information maintained in axial vectors, to compute the linear address of an extendible array element when passed its k-dimensional index. We also give the inverse function, F-1*() for deriving the k-dimensional index when given the linear address. We show how the mapping function, in combination with MPI-IO and a parallel file system, allows for the growth of the extendible array without reorganization and no significant performance degradation of applications accessing elements in any desired order. We give methods for reading and writing sub-arrays into and out of parallel applications that run on a cluster of workstations. The axial-vectors are replicated and maintained in each node that accesses sub-array elements.

Evolution of elastic x-ray scattering in laser-shocked warm dense lithium.

Science.gov (United States)

Kugland, N L; Gregori, G; Bandyopadhyay, S; Brenner, C M; Brown, C R D; Constantin, C; Glenzer, S H; Khattak, F Y; Kritcher, A L; Niemann, C; Otten, A; Pasley, J; Pelka, A; Roth, M; Spindloe, C; Riley, D

2009-12-01

We have studied the dynamics of warm dense Li with near-elastic x-ray scattering. Li foils were heated and compressed using shock waves driven by 4-ns-long laser pulses. Separate 1-ns-long laser pulses were used to generate a bright source of 2.96 keV Cl Ly- alpha photons for x-ray scattering, and the spectrum of scattered photons was recorded at a scattering angle of 120 degrees using a highly oriented pyrolytic graphite crystal operated in the von Hamos geometry. A variable delay between the heater and backlighter laser beams measured the scattering time evolution. Comparison with radiation-hydrodynamics simulations shows that the plasma is highly coupled during the first several nanoseconds, then relaxes to a moderate coupling state at later times. Near-elastic scattering amplitudes have been successfully simulated using the screened one-component plasma model. Our main finding is that the near-elastic scattering amplitudes are quite sensitive to the mean ionization state Z[over ] and by extension to the choice of ionization model in the radiation-hydrodynamics simulations used to predict plasma properties within the shocked Li.

Evolution of elastic x-ray scattering in laser-shocked warm dense lithium

International Nuclear Information System (INIS)

Kugland, N. L.; Niemann, C.; Gregori, G.; Bandyopadhyay, S.; Spindloe, C.; Brenner, C. M.; Brown, C. R. D.; Constantin, C.; Glenzer, S. H.; Khattak, F. Y.; Kritcher, A. L.; Otten, A.; Pelka, A.; Roth, M.; Pasley, J.; Riley, D.

2009-01-01

We have studied the dynamics of warm dense Li with near-elastic x-ray scattering. Li foils were heated and compressed using shock waves driven by 4-ns-long laser pulses. Separate 1-ns-long laser pulses were used to generate a bright source of 2.96 keV Cl Ly-α photons for x-ray scattering, and the spectrum of scattered photons was recorded at a scattering angle of 120 deg. using a highly oriented pyrolytic graphite crystal operated in the von Hamos geometry. A variable delay between the heater and backlighter laser beams measured the scattering time evolution. Comparison with radiation-hydrodynamics simulations shows that the plasma is highly coupled during the first several nanoseconds, then relaxes to a moderate coupling state at later times. Near-elastic scattering amplitudes have been successfully simulated using the screened one-component plasma model. Our main finding is that the near-elastic scattering amplitudes are quite sensitive to the mean ionization state Z and by extension to the choice of ionization model in the radiation-hydrodynamics simulations used to predict plasma properties within the shocked Li.

Electron conductivity model for dense plasmas

International Nuclear Information System (INIS)

Lee, Y.T.; More, R.M.

1984-01-01

An electron conductivity model for dense plasmas is described which gives a consistent and complete set of transport coefficients including not only electrical conductivity and thermal conductivity, but also thermoelectric power, and Hall, Nernst, Ettinghausen, and Leduc--Righi coefficients. The model is useful for simulating plasma experiments with strong magnetic fields. The coefficients apply over a wide range of plasma temperature and density and are expressed in a computationally simple form. Different formulas are used for the electron relaxation time in plasma, liquid, and solid phases. Comparisons with recent calculations and available experimental measurement show the model gives results which are sufficiently accurate for many practical applications

Strange mesons in dense nuclear matter

International Nuclear Information System (INIS)

Senger, P.

2000-10-01

Experimental data on the production of kaons and antikaons in heavy ion collisions at relativistic energies are reviewed with respect to in-medium effects. The K - /K + ratios measured in nucleus-nucleus collisions are 1-2 orders of magnitude larger than in proton-proton collisions. The azimuthal angle distributions of K + mesons indicate a repulsive kaon-nucleon potential. Microscopic transport calculations consistently explain both the yields and the emission patterns of kaons and antikaons when assuming that their properties are modified in dense nuclear matter. The K + production excitation functions measured in light and heavy collision systems provide evidence for a soft nuclear equation-of-state. (orig.)

Towards Dense Nuclear Matter in A Modified Sakai-Sugimoto Model

Directory of Open Access Journals (Sweden)

Rho Mannque

2012-02-01

Full Text Available As a part of the attempt to address dense baryonic matter, we first review holographic approaches to QCD. The big advantage of the holographic approaches is that they render strongly coupled 4D gauge theories as duals of certain weakly coupled string/supergravity that are well understood. Its relevance to real QCD is one of the central problems in hadron/nuclear physics as well as in the context of applied string theory. None of the models based on these holographic approaches presently available can adequately describe the system we are interested in, namely dense baryonic matter. Nevertheless, some aspects of the holographic approach are found to describe certain processes both in vacuum and in medium. In this talk we only present the structure of a model that appears to be closest to QCD, and has the potential to address the problem.

Wave propagation through a dielectric layer containing densely packed fibers

International Nuclear Information System (INIS)

Lee, Siu-Chun

2011-01-01

This paper presents the theoretical formulation for the propagation of electromagnetic wave through a dielectric layer containing a random dense distribution of fibers. The diameter of the fibers is comparable to the inter-fiber spacing and wavelength of the incident radiation, but is much smaller than the thickness of the layer. Discontinuity of refractive index across the boundaries of the dielectric layer resulted in multiple internal reflection of both the primary source wave and the scattered waves. As a result the incident waves on the fibers consist of the multiply-reflected primary waves, scattered waves from other fibers, and scattered-reflected waves from the boundaries. The effective propagation constant of the dielectric fiber layer was developed by utilizing the Effective field-Quasicrystalline approximation. The influence of the refractive index of the dielectric medium on the radiative properties of a dense fiber layer was examined by means of numerical analyses.

Dense neuron clustering explains connectivity statistics in cortical microcircuits.

Directory of Open Access Journals (Sweden)

Vladimir V Klinshov

Full Text Available Local cortical circuits appear highly non-random, but the underlying connectivity rule remains elusive. Here, we analyze experimental data observed in layer 5 of rat neocortex and suggest a model for connectivity from which emerge essential observed non-random features of both wiring and weighting. These features include lognormal distributions of synaptic connection strength, anatomical clustering, and strong correlations between clustering and connection strength. Our model predicts that cortical microcircuits contain large groups of densely connected neurons which we call clusters. We show that such a cluster contains about one fifth of all excitatory neurons of a circuit which are very densely connected with stronger than average synapses. We demonstrate that such clustering plays an important role in the network dynamics, namely, it creates bistable neural spiking in small cortical circuits. Furthermore, introducing local clustering in large-scale networks leads to the emergence of various patterns of persistent local activity in an ongoing network activity. Thus, our results may bridge a gap between anatomical structure and persistent activity observed during working memory and other cognitive processes.

Wet skins tanning with chromium in dense CO{sub 2} under pressure; Tannage au chrome de peaux humides en CO{sub 2} dense sous pression

Energy Technology Data Exchange (ETDEWEB)

Saldinari, L. [Tanneries Roux SA, 26 - Romans Sur Isere (France)]|[Tanneries du Puy (France)]|[Tanneries d' Annonay, 07 (France); Dutel, Ch. [Societe ATC (France); Perre, Ch. [CEA Centre de Pierrelatte (DCC/DTE/SLC), 26 (France)

2000-07-01

An ancestral gesture steadily improved through the centuries, the transformation of skins into leather includes several stages of which the principal one is tanning. Today, 90 % of the world's leather products are tanned with chromium. However, this stage is an environmental liability, and reducing the volume and chromium content of the waste has become a major issue. A first study on skin degreasing by dense CO{sub 2} helped sharply reduce the volume of the fatty effluents. To replace water by dense CO{sub 2} as the tanning medium was the logical next step. The present study was carried out in cooperation with three tanneries in the Rhone-Alpes-Auvergne area of France and a manufacturer of tanning materials. The difficulty of the study was the chemically opposed character of the two media involved. CO{sub 2} is a non-polar and lipophilic solvent while inorganic chromium is insoluble. The water present in the treated skin is a polar and ionic reaction medium and one of the reagents in tanning chemistry. The mixture of these two partially miscible compounds gives a pH 3 by carbonic acid formation. Tanning is based on the reactivity of collagen, the main component of the skin, with hydroxylated complexes of chromium. Collagen is a protein containing some chemical functions, amines (R-NH{sub 2}) and carboxylic (R-COOH) for example. These functions impart an amphoteric character to the compound. The WERNER theory of complex salts explains the formation of hydroxylated complexes of chromium and their fixing on the carboxylic functions of collagen by oxolation. pH is the key parameter in tanning. The success of the process demands chromium impregnation without fixing it at a pH lower than 5, and then to fix it by increasing the pH. This opened two alternatives for transferring chromium in the skin: solubilize chromium in CO{sub 2} via soluble organometallic complexes; or put the chromium salt into suspension without solubilizing it. The best results were obtained

Association of nutrient-dense snack combinations with calories and vegetable intake.

Science.gov (United States)

Wansink, Brian; Shimizu, Mitsuru; Brumberg, Adam

2013-01-01

With other factors such as general diet and insufficient exercise, eating non-nutrient dense snack foods such as potato chips contributes to childhood obesity. We examined whether children consumed fewer calories when offered high-nutrient dense snacks consisting of cheese and vegetables than children who were offered non-nutrient dense snacks (ie, potato chips). Two hundred one children (115 girls) entering the third to sixth grades were randomly assigned to 1 of 4 snacking conditions: (1) potato chips only, (2) cheese-only, (3) vegetables only, and (4) cheese and vegetables. Children were allowed to eat snacks freely provided while watching 45-minute TV programs. Satiety was measured before they started eating snacks, in the middle of the study, and 20 minutes after they finished eating the snacks. Parents completed a questionnaire regarding their family environment. Children consumed 72% fewer calories when eating a combined snack compared with when they were served potato chips, P snack needed significantly fewer calories to achieve satiety than those who ate potato chips, P snack conditions on caloric intake were more pronounced among overweight or obese children (P = .02) and those from low-involvement families (P = .049) The combination snack of vegetables and cheese can be an effective means for children to reduce caloric intake while snacking. The effect was more pronounced among children who were overweight or obese and children from low-involvement families.

AN AERIAL-IMAGE DENSE MATCHING APPROACH BASED ON OPTICAL FLOW FIELD

Directory of Open Access Journals (Sweden)

W. Yuan

2016-06-01

Full Text Available Dense matching plays an important role in many fields, such as DEM (digital evaluation model producing, robot navigation and 3D environment reconstruction. Traditional approaches may meet the demand of accuracy. But the calculation time and out puts density is hardly be accepted. Focus on the matching efficiency and complex terrain surface matching feasibility an aerial image dense matching method based on optical flow field is proposed in this paper. First, some high accurate and uniformed control points are extracted by using the feature based matching method. Then the optical flow is calculated by using these control points, so as to determine the similar region between two images. Second, the optical flow field is interpolated by using the multi-level B-spline interpolation in the similar region and accomplished the pixel by pixel coarse matching. Final, the results related to the coarse matching refinement based on the combined constraint, which recognizes the same points between images. The experimental results have shown that our method can achieve per-pixel dense matching points, the matching accuracy achieves sub-pixel level, and fully meet the three-dimensional reconstruction and automatic generation of DSM-intensive matching’s requirements. The comparison experiments demonstrated that our approach’s matching efficiency is higher than semi-global matching (SGM and Patch-based multi-view stereo matching (PMVS which verifies the feasibility and effectiveness of the algorithm.

Solving sparse linear least squares problems on some supercomputers by using large dense blocks

DEFF Research Database (Denmark)

Hansen, Per Christian; Ostromsky, T; Sameh, A

1997-01-01

technique is preferable to sparse matrix technique when the matrices are not large, because the high computational speed compensates fully the disadvantages of using more arithmetic operations and more storage. For very large matrices the computations must be organized as a sequence of tasks in each......Efficient subroutines for dense matrix computations have recently been developed and are available on many high-speed computers. On some computers the speed of many dense matrix operations is near to the peak-performance. For sparse matrices storage and operations can be saved by operating only...... and storing only nonzero elements. However, the price is a great degradation of the speed of computations on supercomputers (due to the use of indirect addresses, to the need to insert new nonzeros in the sparse storage scheme, to the lack of data locality, etc.). On many high-speed computers a dense matrix...

Redesigning Triangular Dense Matrix Computations on GPUs

KAUST Repository

Charara, Ali

2016-08-09

A new implementation of the triangular matrix-matrix multiplication (TRMM) and the triangular solve (TRSM) kernels are described on GPU hardware accelerators. Although part of the Level 3 BLAS family, these highly computationally intensive kernels fail to achieve the percentage of the theoretical peak performance on GPUs that one would expect when running kernels with similar surface-to-volume ratio on hardware accelerators, i.e., the standard matrix-matrix multiplication (GEMM). The authors propose adopting a recursive formulation, which enriches the TRMM and TRSM inner structures with GEMM calls and, therefore, reduces memory traffic while increasing the level of concurrency. The new implementation enables efficient use of the GPU memory hierarchy and mitigates the latency overhead, to run at the speed of the higher cache levels. Performance comparisons show up to eightfold and twofold speedups for large dense matrix sizes, against the existing state-of-the-art TRMM and TRSM implementations from NVIDIA cuBLAS, respectively, across various GPU generations. Once integrated into high-level Cholesky-based dense linear algebra algorithms, the performance impact on the overall applications demonstrates up to fourfold and twofold speedups, against the equivalent native implementations, linked with cuBLAS TRMM and TRSM kernels, respectively. The new TRMM/TRSM kernel implementations are part of the open-source KBLAS software library (http://ecrc.kaust.edu.sa/Pages/Res-kblas.aspx) and are lined up for integration into the NVIDIA cuBLAS library in the upcoming v8.0 release.

Euler-Lagrange modeling of the hydrodynamics of dense multiphase flows

NARCIS (Netherlands)

Padding, J.T.; Deen, N.G.; Peters, E. A. J. F.; Kuipers, J. A. M.

2015-01-01

The large-scale hydrodynamic behavior of relatively dense dispersed multiphase flows, such as encountered in fluidized beds, bubbly flows, and liquid sprays, can be predicted efficiently by use of Euler-Lagrange models. In these models, grid-averaged equations for the continuous-phase flow field are

Deep convolutional neural networks for dense non-uniform motion deblurring

CSIR Research Space (South Africa)

Cronje, J

2015-11-01

Full Text Available to form a dense non-uniform motion estimation map. Furthermore, a second CNN is trained to perform deblurring given a blurry image patch and the estimated motion vector. Combining the two trained networks result in a deep learning approach that can enhance...

Incremental and batch planar simplification of dense point cloud maps

NARCIS (Netherlands)

Whelan, T.; Ma, L.; Bondarev, E.; With, de P.H.N.; McDonald, J.

2015-01-01

Dense RGB-D SLAM techniques and high-fidelity LIDAR scanners are examples from an abundant set of systems capable of providing multi-million point datasets. These datasets quickly become difficult to process due to the sheer volume of data, typically containing significant redundant information,

Breaking Dense Structures: Proving Stability of Densely Structured Hybrid Systems

Directory of Open Access Journals (Sweden)

Eike Möhlmann

2015-06-01

Full Text Available Abstraction and refinement is widely used in software development. Such techniques are valuable since they allow to handle even more complex systems. One key point is the ability to decompose a large system into subsystems, analyze those subsystems and deduce properties of the larger system. As cyber-physical systems tend to become more and more complex, such techniques become more appealing. In 2009, Oehlerking and Theel presented a (de-composition technique for hybrid systems. This technique is graph-based and constructs a Lyapunov function for hybrid systems having a complex discrete state space. The technique consists of (1 decomposing the underlying graph of the hybrid system into subgraphs, (2 computing multiple local Lyapunov functions for the subgraphs, and finally (3 composing the local Lyapunov functions into a piecewise Lyapunov function. A Lyapunov function can serve multiple purposes, e.g., it certifies stability or termination of a system or allows to construct invariant sets, which in turn may be used to certify safety and security. In this paper, we propose an improvement to the decomposing technique, which relaxes the graph structure before applying the decomposition technique. Our relaxation significantly reduces the connectivity of the graph by exploiting super-dense switching. The relaxation makes the decomposition technique more efficient on one hand and on the other allows to decompose a wider range of graph structures.

Reciprocal locomotion of dense swimmers in Stokes flow

International Nuclear Information System (INIS)

Gonzalez-Rodriguez, David; Lauga, Eric

2009-01-01

Due to the kinematic reversibility of Stokes flow, a body executing a reciprocal motion (a motion in which the sequence of body configurations remains identical under time reversal) cannot propel itself in a viscous fluid in the limit of negligible inertia; this result is known as Purcell's scallop theorem. In this limit, the Reynolds numbers based on the fluid inertia and on the body inertia are all zero. Previous studies characterized the breakdown of the scallop theorem with fluid inertia. In this paper we show that, even in the absence of fluid inertia, certain dense bodies undergoing reciprocal motion are able to swim. Using Lorentz's reciprocal theorem, we first derive the general differential equations that govern the locomotion kinematics of a dense swimmer. We demonstrate that no reciprocal swimming is possible if the body motion consists only of tangential surface deformation (squirming). We then apply our general formulation to compute the locomotion of four simple swimmers, each with a different spatial asymmetry, that perform normal surface deformations. We show that the resulting swimming speeds (or rotation rates) scale as the first power of a properly defined 'swimmer Reynolds number', demonstrating thereby a continuous breakdown of the scallop theorem with body inertia.

Directed light fabrication of rhenium components

Energy Technology Data Exchange (ETDEWEB)

Milewski, J.O.; Thoma, D.J.; Lewis, G.K.

1997-02-01

Directed Light Fabrication (DLF) is a direct metal deposition process that fuses powder, delivered by gas into the focal zone of a high powered laser beam to form fully dense near-net shaped components. This is accomplished in one step without the use of molds, dies, forming, pressing, sintering or forging equipment. DLF is performed in a high purity inert environment free from the contaminants associated with conventional processing such as oxide and carbon pickup, lubricants, binding agents, cooling or cleaning agents. Applications using rhenium have historically been limited in part by its workability and cost. This study demonstrates the ability to fuse rhenium metal powder, using a DLF machine, into free standing rods and describes the associated parameter study. Microstructural comparisons between DLF deposited rhenium and commercial rhenium sheet product is performed. This research combined with existing DLF technology demonstrates the feasibility of forming complex rhenium, metal shapes directly from powder.

Design of an eye-in-hand sensing and servo control framework for harvesting robotics in dense vegetation

NARCIS (Netherlands)

Barth, Ruud; Hemming, Jochen; Henten, van E.J.

2016-01-01

A modular software framework design that allows flexible implementation of eye-in-hand sensing and motion control for agricultural robotics in dense vegetation is reported. Harvesting robots in cultivars with dense vegetation require multiple viewpoints and on-line trajectory adjustments in order

Violent storms within the sea: Dense water formation episodes in the Mediterranean.

Science.gov (United States)

Salat, J.

2009-09-01

The Mediterranean is a semi enclosed basin which receives surface water from the Atlantic Ocean. Most of this water is returned into the Ocean with higher density, spreading at more than 1000 m depth (the rest is transported by the atmosphere and the rivers to the Ocean surface). In terms of water budget, the Mediterranean is considered an evaporation basin, but the loss of water is neither the only process that increases the water density nor it is a steady or uniform process. The factors affecting the water density, temperature and salinity, are driven by mass and heat exchanges with the atmosphere. Those exchanges may be by direct contact or mediated by the land. Therefore, changes in water density depend on the water circulation and local weather conditions, both with seasonal and geographical constraints. As the compressibility of water is very low, stratification is expected and horizontal motion is the predominant in the sea interior. Among the few processes that may introduce a vertical component in the water motion are surface heat loss or evaporation that increase the surface water density triggering convective cells. Such processes will be enhanced by surface cooling or by dry continental winds, and counterbalanced by rain, river runoff, solar heating and condensation. Therefore dense water formation are more likely to occur when sea surface temperature is higher than the surface air temperature. There are several scales of convective motions in the ocean, starting from the formation of the surface mixed layer during summer, by night cooling, breezes, and occasional wind storms. During autumn and winter, the vertical scale of the mixing is increasing by steps, through wind storms and progressive cooling, to easily reach the bottom over the continental shelves, typically not deeper than 150 m. However, as the Gibraltar sill is relatively shallow (~350 m) in relation to the average Mediterranean basin (2000-3000 m), the stratification of the deeper layers

Graph Quasicontinuous Functions and Densely Continuous Forms

Directory of Open Access Journals (Sweden)

Lubica Hola

2017-07-01

Full Text Available Let $X, Y$ be topological spaces. A function $f: X \\to Y$ is said to be graph quasicontinuous if there is a quasicontinuous function $g: X \\to Y$ with the graph of $g$ contained in the closure of the graph of $f$. There is a close relation between the notions of graph quasicontinuous functions and minimal usco maps as well as the notions of graph quasicontinuous functions and densely continuous forms. Every function with values in a compact Hausdorff space is graph quasicontinuous; more generally every locally compact function is graph quasicontinuous.

Fine coal processing with dense-medium cyclones

CSIR Research Space (South Africa)

De Korte, GJ

2012-10-01

Full Text Available Institute of Mining and Metallurgy. October 1980, pp. 357-361. 24 Horsfall, D.W. 1976. The treatment of fine coal: Upgrading ?0.5 mm coal to obtain a low-ash product. ChemSA, July. 124-129. Kempnich, R.J., van Barneveld, S. and Lusan, A. 1993. Dense... was good and the results were reported by Mengelers and Absil (1976) (see Table 2). The magnetite consumption for the operation at Tertre was approximately 1 kg per feed ton. In 1965, a similar plant was constructed at Winterslag in Belgium. This plant...

Single-shot mega-electronvolt ultrafast electron diffraction for structure dynamic studies of warm dense matter

Energy Technology Data Exchange (ETDEWEB)

Mo, M. Z., E-mail: mmo09@slac.stanford.edu; Shen, X.; Chen, Z.; Li, R. K.; Dunning, M.; Zheng, Q.; Weathersby, S. P.; Reid, A. H.; Coffee, R.; Makasyuk, I.; Edstrom, S.; McCormick, D.; Jobe, K.; Hast, C.; Glenzer, S. H.; Wang, X. [SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, California 94025 (United States); Sokolowski-Tinten, K. [Faculty of Physics and Centre for Nanointegration Duisburg-Essen, University of Duisburg-Essen, Lotharstrasse 1, D-47048 Duisburg (Germany)

2016-11-15

We have developed a single-shot mega-electronvolt ultrafast-electron-diffraction system to measure the structural dynamics of warm dense matter. The electron probe in this system is featured by a kinetic energy of 3.2 MeV and a total charge of 20 fC, with the FWHM pulse duration and spot size at sample of 350 fs and 120 μm respectively. We demonstrate its unique capability by visualizing the atomic structural changes of warm dense gold formed from a laser-excited 35-nm freestanding single-crystal gold foil. The temporal evolution of the Bragg peak intensity and of the liquid signal during solid-liquid phase transition are quantitatively determined. This experimental capability opens up an exciting opportunity to unravel the atomic dynamics of structural phase transitions in warm dense matter regime.

Multiple and dependent scattering by densely packed discrete spheres: Comparison of radiative transfer and Maxwell theory

International Nuclear Information System (INIS)

Ma, L.X.; Tan, J.Y.; Zhao, J.M.; Wang, F.Q.; Wang, C.A.

2017-01-01

The radiative transfer equation (RTE) has been widely used to deal with multiple scattering of light by sparsely and randomly distributed discrete particles. However, for densely packed particles, the RTE becomes questionable due to strong dependent scattering effects. This paper examines the accuracy of RTE by comparing with the exact electromagnetic theory. For an imaginary spherical volume filled with randomly distributed, densely packed spheres, the RTE is solved by the Monte Carlo method combined with the Percus–Yevick hard model to consider the dependent scattering effect, while the electromagnetic calculation is based on the multi-sphere superposition T-matrix method. The Mueller matrix elements of the system with different size parameters and volume fractions of spheres are obtained using both methods. The results verify that the RTE fails to deal with the systems with a high-volume fraction due to the dependent scattering effects. Apart from the effects of forward interference scattering and coherent backscattering, the Percus–Yevick hard sphere model shows good accuracy in accounting for the far-field interference effects for medium or smaller size parameters (up to 6.964 in this study). For densely packed discrete spheres with large size parameters (equals 13.928 in this study), the improvement of dependent scattering correction tends to deteriorate. The observations indicate that caution must be taken when using RTE in dealing with the radiative transfer in dense discrete random media even though the dependent scattering correction is applied. - Highlights: • The Muller matrix of randomly distributed, densely packed spheres are investigated. • The effects of multiple scattering and dependent scattering are analyzed. • The accuracy of radiative transfer theory for densely packed spheres is discussed. • Dependent scattering correction takes effect at medium size parameter or smaller. • Performance of dependent scattering correction

A pulsed power hydrodynamics approach to exploring properties of warm dense matter

Energy Technology Data Exchange (ETDEWEB)

Reinovsky, Robert Emil [Los Alamos National Laboratory

2008-01-01

Pulsed Power Hydrodynamics, as an application of low-impedance, pulsed power, and high magnetic field technology developed over the last decade to study advanced hydrodynamic problems, instabilities, turbulence, and material properties, can potentially be applied to the study of the behavior and properties of warm dense matter (WDM) as well. Exploration of the properties, such as equation of state and conductivity, of warm dense matter is an emerging area of study focused on the behavior of matter at density near solid density (from 10% of solid density to a few times solid density) and modest temperatures ({approx}1-10 eV). Warm dense matter conditions can be achieved by laser or particle beam heating of very small quantities of matter on timescales short compared to the subsequent hydrodynamic expansion timescales (isochoric heating) and a vigorous community of researchers is applying these techniques using petawatt scale laser systems, but the microscopic size scale of the WDM produced in this way limits access to some physics phenomena. Pulsed power hydrodynamics techniques, either through high convergence liner compression of a large volume, modest density, low temperature plasma to densities approaching solid density or through the explosion and subsequent expansion of a conductor (wire) against a high pressure (density) gas background (isobaric expansion) techniques both offer the prospect for producing warm dense matter in macroscopic quantities. However, both techniques demand substantial energy, proper power conditioning and delivery, and an understanding of the hydrodynamic and instability processes that limit each technique. Similarly, liner compression of normal density material, perhaps using multiple reflected shocks can provide access to the challenging region above normal density -- again with the requirement of very large amounts of driving energy. In this paper we will provide an introduction to techniques that might be applied to explore this

Non-dense domain operator matrices and Cauchy problems

International Nuclear Information System (INIS)

Lalaoui Rhali, S.

2002-12-01

In this work, we study Cauchy problems with non-dense domain operator matrices. By assuming that the entries of an unbounded operator matrix are Hille-Yosida operators, we give a necessary and sufficient condition ensuring that the part of this operator matrix generates a semigroup in the closure of its domain. This allows us to prove the well-posedness of the corresponding Cauchy problem. Our results are applied to delay and neutral differential equations. (author)

Preionization Techniques in a kJ-Scale Dense Plasma Focus

Science.gov (United States)

Povilus, Alexander; Shaw, Brian; Chapman, Steve; Podpaly, Yuri; Cooper, Christopher; Falabella, Steve; Prasad, Rahul; Schmidt, Andrea

2016-10-01

A dense plasma focus (DPF) is a type of z-pinch device that uses a high current, coaxial plasma gun with an implosion phase to generate dense plasmas. These devices can accelerate a beam of ions to MeV-scale energies through strong electric fields generated by instabilities during the implosion of the plasma sheath. The formation of these instabilities, however, relies strongly on the history of the plasma sheath in the device, including the evolution of the gas breakdown in the device. In an effort to reduce variability in the performance of the device, we attempt to control the initial gas breakdown in the device by seeding the system with free charges before the main power pulse arrives. We report on the effectiveness of two techniques developed for a kJ-scale DPF at LLNL, a miniature primer spark gap and pulsed, 255nm LED illumination. Prepared by LLNL under Contract DE-AC52-07NA27344.

Tracking in Dense Environments for the HL-LHC ATLAS Detector

CERN Document Server

Cormier, Felix; The ATLAS collaboration

2018-01-01

Tracking in dense environments, such as in the cores of high-energy jets, will be key for new physics searches as well as measurements of the Standard Model at the High Luminosity LHC (HL-LHC). The HL-LHC will operate in challenging conditions with large radiation doses and high pile-up (up to $\\mu=200$). The current tracking detector will be replaced with a new all-silicon Inner Tracker for the Phase II upgrade of the ATLAS detector. In this talk, characterization of the HL-LHC tracker performance for collimated, high-density charged particles arising from high-momentum decays is presented. In such decays the charged-particle separations are of the order of the tracking detector granularity, leading to challenging reconstruction. The ability of the HL-LHC ATLAS tracker to reconstruct the tracks in such dense environments is discussed and compared to ATLAS Run-2 performance for a variety of relevant physics processes.

Synthesis of Dense and Chiral Dendritic Polyols Using Glyconanosynthon Scaffolds

Directory of Open Access Journals (Sweden)

Tze Chieh Shiao

2016-04-01

Full Text Available Most classical dendrimers are frequently built-up from identical repeating units of low valency (usually AB2 monomers. This strategy necessitates several generations to achieve a large number of surface functionalities. In addition, these typical monomers are achiral. We propose herein the use of sugar derivatives consisting of several and varied functionalities with their own individual intrinsic chirality as both scaffolds/core as well as repeating units. This approach allows the construction of chiral, dense dendrimers with a large number of surface groups at low dendrimer generations. Perpropargylated β-D-glucopyranoside, serving as an A5 core, together with various derivatives, such as 2-azidoethyl tetra-O-allyl-β-D-glucopyranoside, serving as an AB4 repeating moiety, were utilized to construct chiral dendrimers using “click chemistry” (CuAAC reaction. These were further modified by thiol-ene and thiol-yne click reactions with alcohols to provide dendritic polyols. Molecular dynamic simulation supported the assumption that the resulting polyols have a dense structure.

Ideal magnetohydrodynamic simulations of unmagnetized dense plasma jet injection into a hot strongly magnetized plasma

OpenAIRE

Liu, Wei; Hsu, Scott C.

2010-01-01

We present results from three-dimensional ideal magnetohydrodynamic simulations of unmagnetized dense plasma jet injection into a uniform hot strongly magnetized plasma, with the aim of providing insight into core fueling of a tokamak with parameters relevant for ITER and NSTX (National Spherical Torus Experiment). Unmagnetized dense plasma jet injection is similar to compact toroid injection but with much higher plasma density and total mass, and consequently lower required injection velocit...

First-principles calculations of K-shell X-ray absorption spectra for warm dense nitrogen

International Nuclear Information System (INIS)

Li, Zi; Zhang, Shen; Kang, Wei; Wang, Cong; Zhang, Ping

2016-01-01

X-ray absorption spectrum is a powerful tool for atomic structure detection on warm dense matter. Here, we perform first-principles molecular dynamics and X-ray absorption spectrum calculations on warm dense nitrogen along a Hugoniot curve. From the molecular dynamics trajectory, the detailed atomic structures are examined for each thermodynamical condition. The K-shell X-ray absorption spectrum is calculated, and its changes with temperature and pressure along the Hugoniot curve are discussed. The warm dense nitrogen systems may contain isolated nitrogen atoms, N 2 molecules, and nitrogen clusters, which show quite different contributions to the total X-ray spectrum due to their different electron density of states. The changes of X-ray spectrum along the Hugoniot curve are caused by the different nitrogen structures induced by the temperature and the pressure. Some clear signatures on X-ray spectrum for different thermodynamical conditions are pointed out, which may provide useful data for future X-ray experiments.

Energy eigenvalues of helium-like atoms in dense plasmas

International Nuclear Information System (INIS)

Hashino, Tasuke; Nakazaki, Shinobu; Kato, Takako; Kashiwabara, Hiromichi.

1987-04-01

Calculations based on a variational method with wave functions including the correlation of electrons are carried out to obtain energy eigenvalues of Schroedinger's equation for helium-like atoms embedded in dense plasmas, taking the Debye-Hueckel approximation. Energy eigenvalues for the 1 1 S, 2 1 S, and 2 3 S states are obtained as a function of Debye screening length. (author)

Detecting mammographically occult cancer in women with dense breasts using Radon Cumulative Distribution Transform: a preliminary analysis

Science.gov (United States)

Lee, Juhun; Nishikawa, Robert M.; Rohde, Gustavo K.

2018-02-01

We propose using novel imaging biomarkers for detecting mammographically-occult (MO) cancer in women with dense breast tissue. MO cancer indicates visually occluded, or very subtle, cancer that radiologists fail to recognize as a sign of cancer. We used the Radon Cumulative Distribution Transform (RCDT) as a novel image transformation to project the difference between left and right mammograms into a space, increasing the detectability of occult cancer. We used a dataset of 617 screening full-field digital mammograms (FFDMs) of 238 women with dense breast tissue. Among 238 women, 173 were normal with 2 - 4 consecutive screening mammograms, 552 normal mammograms in total, and the remaining 65 women had an MO cancer with a negative screening mammogram. We used Principal Component Analysis (PCA) to find representative patterns in normal mammograms in the RCDT space. We projected all mammograms to the space constructed by the first 30 eigenvectors of the RCDT of normal cases. Under 10-fold crossvalidation, we conducted quantitative feature analysis to classify normal mammograms and mammograms with MO cancer. We used receiver operating characteristic (ROC) analysis to evaluate the classifier's output using the area under the ROC curve (AUC) as the figure of merit. Four eigenvectors were selected via a feature selection method. The mean and standard deviation of the AUC of the trained classifier on the test set were 0.74 and 0.08, respectively. In conclusion, we utilized imaging biomarkers to highlight differences between left and right mammograms to detect MO cancer using novel imaging transformation.

Statistical mechanics of dense granular media

International Nuclear Information System (INIS)

Coniglio, A; Fierro, A; Nicodemi, M; Ciamarra, M Pica; Tarzia, M

2005-01-01

We discuss some recent results on the statistical mechanics approach to dense granular media. In particular, by analytical mean field investigation we derive the phase diagram of monodisperse and bidisperse granular assemblies. We show that 'jamming' corresponds to a phase transition from a 'fluid' to a 'glassy' phase, observed when crystallization is avoided. The nature of such a 'glassy' phase turns out to be the same as found in mean field models for glass formers. This gives quantitative evidence for the idea of a unified description of the 'jamming' transition in granular media and thermal systems, such as glasses. We also discuss mixing/segregation transitions in binary mixtures and their connections to phase separation and 'geometric' effects

Dense sheet Z-pinches

International Nuclear Information System (INIS)

Tetsu, Miyamoto

1999-01-01

The steady state and quasi-steady processes of infinite- and finite-width sheet z-pinches are studied. The relations corresponding to the Bennett relation and Pease-Braginskii current of cylindrical fiber z-pinches depend on a geometrical factor in the sheet z-pinches. The finite-width sheet z-pinch is approximated by a segment of infinite-width sheet z-pinch, if it is wide enough, and corresponds to a number of (width/thickness) times fiber z-pinch plasmas of the diameter that equals the sheet thickness. If the sheet current equals this number times the fiber current, the plasma created in the sheet z-pinches is as dense as in the fiber z-pinches. The total energy of plasma and magnetic field per unit mass is approximately equal in both pinches. Quasi-static transient processes are different in several aspects from the fiber z-pinch. No radiation collapse occurs in the sheet z-pinch. The stability is improved in the sheet z-pinches. The fusion criterions and the experimental arrangements to produce the sheet z-pinches are also discussed. (author)

Energy footprint of advanced dense numerical linear algebra using tile algorithms on multicore architectures

KAUST Repository

Dongarra, Jack

2012-11-01

We propose to study the impact on the energy footprint of two advanced algorithmic strategies in the context of high performance dense linear algebra libraries: (1) mixed precision algorithms with iterative refinement allow to run at the peak performance of single precision floating-point arithmetic while achieving double precision accuracy and (2) tree reduction technique exposes more parallelism when factorizing tall and skinny matrices for solving over determined systems of linear equations or calculating the singular value decomposition. Integrated within the PLASMA library using tile algorithms, which will eventually supersede the block algorithms from LAPACK, both strategies further excel in performance in the presence of a dynamic task scheduler while targeting multicore architecture. Energy consumption measurements are reported along with parallel performance numbers on a dual-socket quad-core Intel Xeon as well as a quad-socket quad-core Intel Sandy Bridge chip, both providing component-based energy monitoring at all levels of the system, through the Power Pack framework and the Running Average Power Limit model, respectively. © 2012 IEEE.

Energy footprint of advanced dense numerical linear algebra using tile algorithms on multicore architectures

KAUST Repository

Dongarra, Jack; Ltaief, Hatem; Luszczek, Piotr R.; Weaver, Vincent M.

2012-01-01

We propose to study the impact on the energy footprint of two advanced algorithmic strategies in the context of high performance dense linear algebra libraries: (1) mixed precision algorithms with iterative refinement allow to run at the peak performance of single precision floating-point arithmetic while achieving double precision accuracy and (2) tree reduction technique exposes more parallelism when factorizing tall and skinny matrices for solving over determined systems of linear equations or calculating the singular value decomposition. Integrated within the PLASMA library using tile algorithms, which will eventually supersede the block algorithms from LAPACK, both strategies further excel in performance in the presence of a dynamic task scheduler while targeting multicore architecture. Energy consumption measurements are reported along with parallel performance numbers on a dual-socket quad-core Intel Xeon as well as a quad-socket quad-core Intel Sandy Bridge chip, both providing component-based energy monitoring at all levels of the system, through the Power Pack framework and the Running Average Power Limit model, respectively. © 2012 IEEE.

Conditioning 3D object-based models to dense well data

Science.gov (United States)

Wang, Yimin C.; Pyrcz, Michael J.; Catuneanu, Octavian; Boisvert, Jeff B.

2018-06-01

Object-based stochastic simulation models are used to generate categorical variable models with a realistic representation of complicated reservoir heterogeneity. A limitation of object-based modeling is the difficulty of conditioning to dense data. One method to achieve data conditioning is to apply optimization techniques. Optimization algorithms can utilize an objective function measuring the conditioning level of each object while also considering the geological realism of the object. Here, an objective function is optimized with implicit filtering which considers constraints on object parameters. Thousands of objects conditioned to data are generated and stored in a database. A set of objects are selected with linear integer programming to generate the final realization and honor all well data, proportions and other desirable geological features. Although any parameterizable object can be considered, objects from fluvial reservoirs are used to illustrate the ability to simultaneously condition multiple types of geologic features. Channels, levees, crevasse splays and oxbow lakes are parameterized based on location, path, orientation and profile shapes. Functions mimicking natural river sinuosity are used for the centerline model. Channel stacking pattern constraints are also included to enhance the geological realism of object interactions. Spatial layout correlations between different types of objects are modeled. Three case studies demonstrate the flexibility of the proposed optimization-simulation method. These examples include multiple channels with high sinuosity, as well as fragmented channels affected by limited preservation. In all cases the proposed method reproduces input parameters for the object geometries and matches the dense well constraints. The proposed methodology expands the applicability of object-based simulation to complex and heterogeneous geological environments with dense sampling.

Importance of intrinsic properties of dense caseinate dispersions for structure formation

NARCIS (Netherlands)

Manski, J.M.; Riemsdijk, van L.E.; Goot, van der A.J.; Boom, R.M.

2007-01-01

Rheological measurements of dense calcium caseinate and sodium caseinate dispersions (15%) provided insight into the factors determining shear-induced structure formation in caseinates. Calcium caseinate at a sufficiently high concentration (30%) was shown to form highly anisotropic structures

Nucleation of strange matter in dense stellar cores

International Nuclear Information System (INIS)

Horvath, J.E.; Benvenuto, O.G.; Vucetich, H.

1992-01-01

We investigate the nucleation of strange quark matter inside hot, dense nuclear matter. Applying Zel'dovich's kinetic theory of nucleation we find a lower limit of the temperature T for strange-matter bubbles to appear, which happens to be satisfied inside the Kelvin-Helmholtz cooling era of a compact star life but not much after it. Our bounds thus suggest that a prompt conversion could be achieved, giving support to earlier expectations for nonstandard type-II supernova scenarios

TEXTURE-AWARE DENSE IMAGE MATCHING USING TERNARY CENSUS TRANSFORM

Directory of Open Access Journals (Sweden)

H. Hu

2016-06-01

Full Text Available Textureless and geometric discontinuities are major problems in state-of-the-art dense image matching methods, as they can cause visually significant noise and the loss of sharp features. Binary census transform is one of the best matching cost methods but in textureless areas, where the intensity values are similar, it suffers from small random noises. Global optimization for disparity computation is inherently sensitive to parameter tuning in complex urban scenes, and must compromise between smoothness and discontinuities. The aim of this study is to provide a method to overcome these issues in dense image matching, by extending the industry proven Semi-Global Matching through 1 developing a ternary census transform, which takes three outputs in a single order comparison and encodes the results in two bits rather than one, and also 2 by using texture-information to self-tune the parameters, which both preserves sharp edges and enforces smoothness when necessary. Experimental results using various datasets from different platforms have shown that the visual qualities of the triangulated point clouds in urban areas can be largely improved by these proposed methods.

Finding low-conductance sets with dense interactions (FLCD) for better protein complex prediction.

Science.gov (United States)

Wang, Yijie; Qian, Xiaoning

2017-03-14

Intuitively, proteins in the same protein complexes should highly interact with each other but rarely interact with the other proteins in protein-protein interaction (PPI) networks. Surprisingly, many existing computational algorithms do not directly detect protein complexes based on both of these topological properties. Most of them, depending on mathematical definitions of either "modularity" or "conductance", have their own limitations: Modularity has the inherent resolution problem ignoring small protein complexes; and conductance characterizes the separability of complexes but fails to capture the interaction density within complexes. In this paper, we propose a two-step algorithm FLCD (Finding Low-Conductance sets with Dense interactions) to predict overlapping protein complexes with the desired topological structure, which is densely connected inside and well separated from the rest of the networks. First, FLCD detects well-separated subnetworks based on approximating a potential low-conductance set through a personalized PageRank vector from a protein and then solving a mixed integer programming (MIP) problem to find the minimum-conductance set within the identified low-conductance set. At the second step, the densely connected parts in those subnetworks are discovered as the protein complexes by solving another MIP problem that aims to find the dense subnetwork in the minimum-conductance set. Experiments on four large-scale yeast PPI networks from different public databases demonstrate that the complexes predicted by FLCD have better correspondence with the yeast protein complex gold standards than other three state-of-the-art algorithms (ClusterONE, LinkComm, and SR-MCL). Additionally, results of FLCD show higher biological relevance with respect to Gene Ontology (GO) terms by GO enrichment analysis.

Preparation and characterization of dense nanohydroxyapatite/PLLA composites

International Nuclear Information System (INIS)

Gay, Sandrine; Arostegui, Saioa; Lemaitre, Jacques

2009-01-01

Synthetic bone graft substitutes based on PLLA have been largely studied during the past decade. PLLA/hydroxyapatite composites appear as promising materials for large bone defect healing. In this study dense PLLA/nano-hydroxyapatite composites were prepared by hot pressing. Dense samples were investigated rather than porous scaffolds, in order to shed light on possible correlations between intrinsic mechanical properties and nano-hydroxyapatite concentration. Hydroxyapatite deagglomerated by wet attrition milling, and further dispersed into chloroform was used (median diameter = 80 nm). Particle size distribution measurements and transmission electron microscopy show evidence that particle size and dispersion are maintained throughout the successive steps of composite processing. Mechanical properties were tested (uni-axial and diametral compression tests) as a function of nano-hydroxyapatite content. Increasing concentrations of nano-hydroxyapatite (0, 25 and 50 wt.%) increase the Young's modulus and the mechanical strength of the composite; at the same time, the failure mechanism of the material changes from plastic to brittle. Young's modulus over 6 GPa and uniaxial compressive strength over 100 MPa have been achieved. These values expressed in terms of intrinsic tensile and shear strengths indicate that 50 wt.% nano-hydroxyapatite containing samples develop properties comparable to those of cortical bone. PLLA/nano-hydroxyapatite composites are thus promising candidates to develop bioresorbable porous bone substitutes showing superior mechanical performance

Stochastic entangled chain dynamics of dense polymer solutions.

Science.gov (United States)

Kivotides, Demosthenes; Wilkin, S Louise; Theofanous, Theo G

2010-10-14

We propose an adjustable-parameter-free, entangled chain dynamics model of dense polymer solutions. The model includes the self-consistent dynamics of molecular chains and solvent by describing the former via coarse-grained polymer dynamics that incorporate hydrodynamic interaction effects, and the latter via the forced Stokes equation. Real chain elasticity is modeled via the inclusion of a Pincus regime in the polymer's force-extension curve. Excluded volume effects are taken into account via the combined action of coarse-grained intermolecular potentials and explicit geometric tracking of chain entanglements. We demonstrate that entanglements are responsible for a new (compared to phantom chain dynamics), slow relaxation mode whose characteristic time scale agrees very well with experiment. Similarly good agreement between theory and experiment is also obtained for the equilibrium chain size. We develop methods for the solution of the model in periodic flow domains and apply them to the computation of entangled polymer solutions in equilibrium. We show that the number of entanglements Π agrees well with the number of entanglements expected on the basis of tube theory, satisfactorily reproducing the latter's scaling of Π with the polymer volume fraction φ. Our model predicts diminishing chain size with concentration, thus vindicating Flory's suggestion of excluded volume effects screening in dense solutions. The predicted scaling of chain size with φ is consistent with the heuristic, Flory theory based value.

Thermophysical properties of multi-shock compressed dense argon.

Science.gov (United States)

Chen, Q F; Zheng, J; Gu, Y J; Chen, Y L; Cai, L C; Shen, Z J

2014-02-21

In contrast to the single shock compression state that can be obtained directly via experimental measurements, the multi-shock compression states, however, have to be calculated with the aid of theoretical models. In order to determine experimentally the multiple shock states, a diagnostic approach with the Doppler pins system (DPS) and the pyrometer was used to probe multiple shocks in dense argon plasmas. Plasma was generated by a shock reverberation technique. The shock was produced using the flyer plate impact accelerated up to ∼6.1 km/s by a two-stage light gas gun and introduced into the plenum argon gas sample, which was pre-compressed from the environmental pressure to about 20 MPa. The time-resolved optical radiation histories were determined using a multi-wavelength channel optical transience radiance pyrometer. Simultaneously, the particle velocity profiles of the LiF window was measured with multi-DPS. The states of multi-shock compression argon plasma were determined from the measured shock velocities combining the particle velocity profiles. We performed the experiments on dense argon plasmas to determine the principal Hugonoit up to 21 GPa, the re-shock pressure up to 73 GPa, and the maximum measure pressure of the fourth shock up to 158 GPa. The results are used to validate the existing self-consistent variational theory model in the partial ionization region and create new theoretical models.

Maturation State and Matrix Microstructure Regulate Interstitial Cell Migration in Dense Connective Tissues.

Science.gov (United States)

Qu, Feini; Li, Qing; Wang, Xiao; Cao, Xuan; Zgonis, Miltiadis H; Esterhai, John L; Shenoy, Vivek B; Han, Lin; Mauck, Robert L

2018-02-19

Few regenerative approaches exist for the treatment of injuries to adult dense connective tissues. Compared to fetal tissues, adult connective tissues are hypocellular and show limited healing after injury. We hypothesized that robust repair can occur in fetal tissues with an immature extracellular matrix (ECM) that is conducive to cell migration, and that this process fails in adults due to the biophysical barriers imposed by the mature ECM. Using the knee meniscus as a platform, we evaluated the evolving micromechanics and microstructure of fetal and adult tissues, and interrogated the interstitial migratory capacity of adult meniscal cells through fetal and adult tissue microenvironments with or without partial enzymatic digestion. To integrate our findings, a computational model was implemented to determine how changing biophysical parameters impact cell migration through these dense networks. Our results show that the micromechanics and microstructure of the adult meniscus ECM sterically hinder cell mobility, and that modulation of these ECM attributes via an exogenous matrix-degrading enzyme permits migration through this otherwise impenetrable network. By addressing the inherent limitations to repair imposed by the mature ECM, these studies may define new clinical strategies to promote repair of damaged dense connective tissues in adults.

A comparison between plaque-based and vessel-based measurement for plaque component using volumetric intravascular ultrasound radiofrequency data analysis.

Science.gov (United States)

Shin, Eun-Seok; Garcia-Garcia, Hector M; Garg, Scot; Serruys, Patrick W

2011-04-01

Although percent plaque components on plaque-based measurement have been used traditionally in previous studies, the impact of vessel-based measurement for percent plaque components have yet to be studied. The purpose of this study was therefore to correlate percent plaque components derived by plaque- and vessel-based measurement using intravascular ultrasound virtual histology (IVUS-VH). The patient cohort comprised of 206 patients with de novo coronary artery lesions who were imaged with IVUS-VH. Age ranged from 35 to 88 years old, and 124 patients were male. Whole pullback analysis was used to calculate plaque volume, vessel volume, and absolute and percent volumes of fibrous, fibrofatty, necrotic core, and dense calcium. The plaque and vessel volumes were well correlated (r = 0.893, P measurement was also highly correlated with vessel-based measurement. Therefore, the percent plaque component volume calculated by vessel volume could be used instead of the conventional percent plaque component volume calculated by plaque volume.

Atomic physics in dense plasmas. Recent advances

International Nuclear Information System (INIS)

Leboucher-Dalimier, E.; Angelo, P.; Ceccotti, T.; Derfoul, H.; Poquerusse, A.; Sauvan, P.; Oks, E.

2000-01-01

This paper presents observations and simulations of novel density-dependent spectroscopic features in hot and dense plasmas. Both time-integrated and time-resolved results using ultra-high resolutions spectrometers are presented; they are justified within the standard spectral line shape theory or the quasi-molecular alternative treatment. A particular attention is paid to the impact of the spatio-temporal evolution of the plasma on the experimental spectra. Satellite-like features and molecular lines in the cases of Flyβ, Heβ are discussed emphasizing their importance for the density diagnostics when ion-ion correlations are significant. (authors)

New look at radiative association in dense interstellar clouds

International Nuclear Information System (INIS)

Herbst, E.

1980-01-01

A corrected statistical theory of radiative association reactions is presented and discussed. Calculations are undertaken to determine the rate coefficients of a variety of radiative association reactions of possible importance in dense interstellar clouds. Our results confirm the suggestion of Smith and Adams that certain radiative association reactions occur quite rapidly at low temperature and are probably important in the synthesis of complex interstellar molecules