Investigations of freezing and cold storage for the analysis of peatland dissolved organic carbon (DOC) and absorbance properties.

Science.gov (United States)

Peacock, Mike; Freeman, Chris; Gauci, Vincent; Lebron, Inma; Evans, Chris D

2015-07-01

Although measured rates of biological degradation of DOC are typically low under dark conditions, it is assumed that water samples must be analysed soon after collection to provide an accurate measure of DOC concentration and UV-visible absorbance. To examine the impact of storage on DOC quality and quantity, we took water samples from an ombrotrophic peatland, and stored them in the dark at 4 °C for 138-1082 days. A median of 29% of DOC was lost during storage, but losses of absorbance at 254 nm were less. DOC loss followed a first-order exponential decay function, and was dependent on storage time. DOC half-life was calculated as 1253 days. Specific absorbance at 254 nm suggested that samples containing more aromatic DOC were more resistant to degradation, although time functioned as the primary control. Samples from two fens showed that loss of absorbance was greater at 400 nm rather than 254 nm, after 192 days storage, suggesting that non-aromatic DOC is preferentially degraded. These results suggest that samples can be stored for several months before losses of DOC become detectable, and that it is possible to back-calculate initial DOC concentrations in long-term stored samples based on known decay rates. Freeze/thaw experiments using samples from a range of peatlands suggested that DOC concentration was mostly unaffected by the process, but DOC increased 37% in one sample. Freezing had unpredictable and sometimes strong effects on absorbance, SUVA and E ratios, therefore freezing is not recommended as a method of preservation for these analyses.

Spatial and Seasonal Variation of dissolved organic carbon (DOC) concentrations in Irish streams: importance of soil and topography characteristics.

Science.gov (United States)

Liu, Wen; Xu, Xianli; McGoff, Nicola M; Eaton, James M; Leahy, Paul; Foley, Nelius; Kiely, Gerard

2014-05-01

Dissolved organic carbon (DOC) concentrations have increased in many sites in Europe and North America in recent decades. High DOC concentrations can damage the structure and functions of aquatic ecosystems by influencing water chemistry. This study investigated the spatial and seasonal variation of DOC concentrations in Irish streams across 55 sites at seven time occasions over 1 year (2006/2007). The DOC concentrations ranged from 0.9 to 25.9 mg/L with a mean value of 6.8 and a median value of 5.7 mg/L and varied significantly over the course of the year. The DOC concentrations from late winter (February: 5.2 ± 3.0 mg/L across 55 sites) and early spring (April: 4.5 ± 3.5 mg/L) had significantly lower DOC concentrations than autumn (October: mean 8.3 ± 5.6 mg/L) and early winter (December: 8.3 ± 5.1 mg/L). The DOC production sources (e.g., litterfall) or the accumulation of DOC over dry periods might be the driving factor of seasonal change in Irish stream DOC concentrations. Analysis of data using stepwise multiple linear regression techniques identified the topographic index (TI, an indication of saturation-excess runoff potential) and soil conditions (organic carbon content and soil drainage characteristics) as key factors in controlling DOC spatial variation in different seasons. The TI and soil carbon content (e.g., soil organic carbon; peat occurrence) are positively related to DOC concentrations, while well-drained soils are negatively related to DOC concentrations. The knowledge of spatial and seasonal variation of DOC concentrations in streams and their drivers are essential for optimum riverine water resources management.

DOC removal paradigms in highly humic aquatic ecosystems.

Science.gov (United States)

Farjalla, Vinicius F; Amado, André M; Suhett, Albert L; Meirelles-Pereira, Frederico

2009-07-01

Dissolved humic substances (HS) usually comprise 50-80% of the dissolved organic carbon (DOC) in aquatic ecosystems. From a trophic and biogeochemical perspective, HS has been considered to be highly refractory and is supposed to accumulate in the water. The upsurge of the microbial loop paradigm and the studies on HS photo-degradation into labile DOC gave rise to the belief that microbial processing of DOC should sustain aquatic food webs in humic waters. However, this has not been extensively supported by the literature, since most HS and their photo-products are often oxidized by microbes through respiration in most nutrient-poor humic waters. Here, we review basic concepts, classical studies, and recent data on bacterial and photo-degradation of DOC, comparing the rates of these processes in highly humic ecosystems and other aquatic ecosystems. We based our review on classical and recent findings from the fields of biogeochemistry and microbial ecology, highlighting some odd results from highly humic Brazilian tropical lagoons, which can reach up to 160 mg C L(-1). Highly humic tropical lagoons showed proportionally lower bacterial production rates and higher bacterial respiration rates (i.e., lower bacterial growth efficiency) than other lakes. Zooplankton showed similar delta(13)C to microalgae but not to humic DOC in these highly humic lagoons. Thus, the data reviewed here do not support the microbial loop as an efficient matter transfer pathway in highly humic ecosystems, where it is supposed to play its major role. In addition, we found that some tropical humic ecosystems presented the highest potential DOC photo-chemical mineralization (PM) rates reported in the literature, exceeding up to threefold the rates reported for temperate humic ecosystems. We propose that these atypically high PM rates are the result of a joint effect of the seasonal dynamics of allochthonous humic DOC input to these ecosystems and the high sunlight incidence throughout the year

Sources for increased DOC-concentrations in the groundwater downstream of the landfill Hohne (DEA); Ursachen erhoehter DOC-Konzentrationen im Grundwasserabstrom am Beispiel der Deponie Hohne (DEA)

Energy Technology Data Exchange (ETDEWEB)

Bahlmann, E.; Seifert, R. [Hamburg Univ. (Germany). Inst. fuer Geologie; Eschenbach, A.; Kleinschmidt, V. [Hamburg Univ. (Germany). Inst. fuer Bodenkunde

2017-08-15

Construction waste together with drilling mud and oil-contaminated soil had been deposited in the landfill Hohne from 1971. Four groundwater monitoring sites had been installed: one monitoring site upstream and three sites downstream of the landfill in three different directions. Downstream of the landfill increased concentrations of chloride, sulphate, sodium and DOC (dissolved organic carbon) had been measured over a period of years. Particularly the source of the DOC has remained unclear. Assumptions were (i) leaking of contaminants from the landfill and degradation under the landfill by microbes or plants or (ii) leaching of DOC from the soil under the landfill caused by a change in the redox potential. The determination of the DOC source was the major subject of this study.

Qualitative changes of riverine dissolved organic matter at low salinities due to flocculation

Science.gov (United States)

Asmala, Eero; Bowers, David G.; Autio, Riitta; Kaartokallio, Hermanni; Thomas, David N.

2014-10-01

The flocculation of dissolved organic matter (DOM) was studied along transects through three boreal estuaries. Besides the bulk concentration parameters, a suite of DOM quality parameters were investigated, including colored DOM (CDOM), fluorescent DOM, and the molecular weight of DOM as well as associated dissolved iron concentrations. We observed significant deviations from conservative mixing at low salinities (DOC), UV absorption (a(CDOM254)), and humic-like fluorescence. The maximum deviation from conservative mixing for DOC concentration was -16%, at salinities between 1 and 2. An associated laboratory experiment was conducted where an artificial salinity gradient between 0 and 6 was created. The experiment confirmed the findings from the estuarine transects, since part of the DOC and dissolved iron pools were transformed to particulate fraction (>0.2 µm) and thereby removing them from the dissolved phase. We also measured flocculation of CDOM, especially in the UV region of the absorption spectrum. Protein-like fluorescence of DOM decreased, while humic-like fluorescence increased because of salt-induced flocculation. Additionally, there was a decrease in molecular weight of DOM. Consequently, the quantity and quality of the remaining DOM pool was significantly changed after influenced to flocculation. Based on these results, we constructed a mechanistic, two-component flocculation model. Our findings underline the importance of the coastal filter, where riverine organic matter is flocculated and exported to the sediments.

Towards a universal microbial inoculum for dissolved organic carbon degradation experiments

Science.gov (United States)

Pastor, Ada; Catalán, Núria; Gutiérrez, Carmen; Nagar, Nupur; Casas-Ruiz, Joan P.; Obrador, Biel; von Schiller, Daniel; Sabater, Sergi; Petrovic, Mira; Borrego, Carles M.; Marcé, Rafael

2017-04-01

Dissolved organic carbon (DOC) is the largest biologically available pool of organic carbon in aquatic ecosystems and its degradation along the land-to-ocean continuum has implications for carbon cycling from local to global scales. DOC biodegradability is usually assessed by incubating filtered water inoculated with native microbial assemblages in the laboratory. However, the use of a native inoculum from several freshwaters, without having a microbial-tailored design, hampers our ability to tease apart the relative contribution of the factors driving DOC degradation from the effects of local microbial communities. The use of a standard microbial inoculum would allow researchers to disentangle the drivers of DOC degradation from the metabolic capabilities of microbial communities operating in situ. With this purpose, we designed a bacterial inoculum to be used in experiments of DOC degradation in freshwater habitats. The inoculum is composed of six bacterial strains that easily grow under laboratory conditions, possess a versatile metabolism and are able to grow under both aerobic and anaerobic conditions. The mixed inoculum showed higher DOC degradation rates than those from their isolated bacterial components and the consumption of organic substrates was consistently replicated. Moreover, DOC degradation rates obtained using the designed inoculum were responsive across a wide range of natural water types differing in DOC concentration and composition. Overall, our results show the potential of the designed inoculum as a tool to discriminate between the effects of environmental drivers and intrinsic properties of DOC on degradation dynamics.

Bioavailability of riverine dissolved organic matter in three Baltic Sea estuaries and the effect of catchment land use

DEFF Research Database (Denmark)

Asmala, E.; Autio, R.; Kaartokallio, H.

2013-01-01

The microbial degradation of dissolved organic carbon and nitrogen (DOC, DON) was studied in three Finnish boreal estuaries with contrasting land use patterns (Kiiminkijoki - natural forest and peatland; Kyrönjoki - agricultural; Karjaanjoki - mixed/urban). Bioassays of 12-18 d long durations were...... the estuaries, from 7.9 to 10.6% and from 5.5 to 21.9%, respectively. DOM originating from the catchment dominated by natural forests and peatlands (Kiiminkijoki) had the lowest DOC and DON degradation rates, as well as the lowest proportions of biodegradable DOC and DON. A greater proportion of agricultural...... in the Kyrönjoki estuary. Lower DOC:DON ratios, smaller molecular weight and higher CDOM absorption spectral slope values of DOM resulted in higher proportion of the initial DOC and DON being transferred to microbial growth and therefore to the pelagic food web. The pristine, peatland and forest...

Crystallization of Doc and the Phd–Doc toxin–antitoxin complex

International Nuclear Information System (INIS)

Garcia-Pino, Abel; Dao-Thi, Minh-Hoa; Gazit, Ehud; Magnuson, Roy David; Wyns, Lode; Loris, Remy

2008-01-01

Crystals of bacteriophage P1 Doc were grown in the free state, in complex with a 22-amino-acid C-terminal peptide of Phd and in complex with full-length Phd. The phd/doc addiction system is responsible for the stable inheritance of lysogenic bacteriophage P1 in its plasmidic form in Escherichia coli and is the archetype of a family of bacterial toxin–antitoxin modules. The His66Tyr mutant of Doc (Doc H66Y ) was crystallized in space group P2 1 , with unit-cell parameters a = 53.1, b = 198.0, c = 54.1 Å, β = 93.0°. These crystals diffracted to 2.5 Å resolution and probably contained four dimers of Doc in the asymmetric unit. Doc H66Y in complex with a 22-amino-acid C-terminal peptide of Phd (Phd 52-73Se ) was crystallized in space group C2, with unit-cell parameters a = 111.1, b = 38.6, c = 63.3 Å, β = 99.3°, and diffracted to 1.9 Å resolution. Crystals of the complete wild-type Phd–Doc complex belonged to space group P3 1 21 or P3 2 21, had an elongated unit cell with dimensions a = b = 48.9, c = 354.9 Å and diffracted to 2.4 Å resolution using synchrotron radiation

Sources for increased DOC-concentrations in the groundwater downstream of the landfill Hohne (DEA)

International Nuclear Information System (INIS)

Bahlmann, E.; Seifert, R.; Eschenbach, A.; Kleinschmidt, V.

2017-08-01

Construction waste together with drilling mud and oil-contaminated soil had been deposited in the landfill Hohne from 1971. Four groundwater monitoring sites had been installed: one monitoring site upstream and three sites downstream of the landfill in three different directions. Downstream of the landfill increased concentrations of chloride, sulphate, sodium and DOC (dissolved organic carbon) had been measured over a period of years. Particularly the source of the DOC has remained unclear. Assumptions were (i) leaking of contaminants from the landfill and degradation under the landfill by microbes or plants or (ii) leaching of DOC from the soil under the landfill caused by a change in the redox potential. The determination of the DOC source was the major subject of this study.

Crystallization of Doc and the Phd-Doc toxin-antitoxin complex.

Science.gov (United States)

Garcia-Pino, Abel; Dao-Thi, Minh-Hoa; Gazit, Ehud; Magnuson, Roy David; Wyns, Lode; Loris, Remy

2008-11-01

The phd/doc addiction system is responsible for the stable inheritance of lysogenic bacteriophage P1 in its plasmidic form in Escherichia coli and is the archetype of a family of bacterial toxin-antitoxin modules. The His66Tyr mutant of Doc (Doc(H66Y)) was crystallized in space group P2(1), with unit-cell parameters a = 53.1, b = 198.0, c = 54.1 A, beta = 93.0 degrees . These crystals diffracted to 2.5 A resolution and probably contained four dimers of Doc in the asymmetric unit. Doc(H66Y) in complex with a 22-amino-acid C-terminal peptide of Phd (Phd(52-73Se)) was crystallized in space group C2, with unit-cell parameters a = 111.1, b = 38.6, c = 63.3 A, beta = 99.3 degrees , and diffracted to 1.9 A resolution. Crystals of the complete wild-type Phd-Doc complex belonged to space group P3(1)21 or P3(2)21, had an elongated unit cell with dimensions a = b = 48.9, c = 354.9 A and diffracted to 2.4 A resolution using synchrotron radiation.

Doc Immelman

African Journals Online (AJOL)

Owner

Baarde, briewe en barmhartigheid (2013) verskyn as 'n laaste saluut aan die Namibiese skrywer,. Doc Immelman, ná sy dood in Maart 2013. Hierdie rubriekbundel is Immelman se twee- de versameling rubrieke ná Ruacana tot Rosh. Pinah (2011). Daniel Ferdinand (Doc) Immel- man was onder meer 'n rubriekskrywer, dig-.

Diurnal variability in riverine dissolved organic matter composition determined by in situ optical measurement in the San Joaquin River (California, USA)

Science.gov (United States)

Spencer, R.G.M.; Pellerin, B.A.; Bergamaschi, B.A.; Downing, B.D.; Kraus, T.E.C.; Smart, D.R.; Dahlgren, R.A.; Hernes, P.J.

2007-01-01

Dissolved organic matter (DOM) concentration and composition in riverine and stream systems are known to vary with hydrological and productivity cycles over the annual and interannual time scales. Rivers are commonly perceived as homogeneous with respect to DOM concentration and composition, particularly under steady flow conditions over short time periods. However, few studies have evaluated the impact of short term variability ( DOC) measurement alone. The in situ optical measurements described in this study clearly showed for the first time diurnal variations in DOM measurements, which have previously been related to both composition and concentration, even though diurnal changes were not well reflected in bulk DOC concentrations. An apparent asynchronous trend of DOM absorbance and chlorophyll-a in comparison to chromophoric dissolved organic matter (CDOM) fluorescence and spectral slope S290-350 suggests that no one specific CDOM spectrophotometric measurement explains absolutely DOM diurnal variation in this system; the measurement of multiple optical parameters is therefore recommended. The observed diurnal changes in DOM composition, measured by in situ optical instrumentation likely reflect both photochemical and biologically-mediated processes. The results of this study highlight that short-term variability in DOM composition may complicate trends for studies aiming to distinguish different DOM sources in riverine systems and emphasizes the importance of sampling specific study sites to be compared at the same time of day. The utilization of in situ optical technology allows short-term variability in DOM dynamics to be monitored and serves to increase our understanding of its processing and fundamental role in the aquatic environment. Copyright ?? 2007 John Wiley & Sons, Ltd.

Influence of land cover on riverine dissolved organic carbon concentrations and export in the Three Rivers Headwater Region of the Qinghai-Tibetan Plateau.

Science.gov (United States)

Ma, Xiaoliang; Liu, Guimin; Wu, Xiaodong; Smoak, Joseph M; Ye, Linlin; Xu, Haiyan; Zhao, Lin; Ding, Yongjian

2018-07-15

The Qinghai-Tibetan plateau (QTP) stores a large amount of soil organic carbon and is the headwater region for several large rivers in Asia. Therefore, it is important to understand the influence of environmental factors on river water quality and the dissolved organic carbon (DOC) export in this region. We examined the water physico-chemical characteristics, DOC concentrations and export rates of 7 rivers under typical land cover types in the Three Rivers Headwater Region during August 2016. The results showed that the highest DOC concentrations were recorded in the rivers within the catchment of alpine wet meadow and meadow. These same rivers had the lowest total suspended solids (TSS) concentrations. The rivers within steppe and desert had the lowest DOC concentrations and highest TSS concentrations. The discharge rates and catchment areas were negatively correlated with DOC concentrations. The SUVA 254 values were significantly negatively correlated with DOC concentrations. The results suggest that the vegetation degradation, which may represent permafrost degradation, can lead to a decrease in DOC concentration, but increasing DOC export and soil erosion. In addition, some of the exported DOC will rapidly decompose in the river, and therefore affect the regional carbon cycle, as well as the water quality in the source water of many large Asian rivers. Copyright © 2018 Elsevier B.V. All rights reserved.

Publishing datasets with eSciDoc and panMetaDocs

Science.gov (United States)

Ulbricht, D.; Klump, J.; Bertelmann, R.

2012-04-01

Currently serveral research institutions worldwide undertake considerable efforts to have their scientific datasets published and to syndicate them to data portals as extensively described objects identified by a persistent identifier. This is done to foster the reuse of data, to make scientific work more transparent, and to create a citable entity that can be referenced unambigously in written publications. GFZ Potsdam established a publishing workflow for file based research datasets. Key software components are an eSciDoc infrastructure [1] and multiple instances of the data curation tool panMetaDocs [2]. The eSciDoc repository holds data objects and their associated metadata in container objects, called eSciDoc items. A key metadata element in this context is the publication status of the referenced data set. PanMetaDocs, which is based on PanMetaWorks [3], is a PHP based web application that allows to describe data with any XML-based metadata schema. The metadata fields can be filled with static or dynamic content to reduce the number of fields that require manual entries to a minimum and make use of contextual information in a project setting. Access rights can be applied to set visibility of datasets to other project members and allow collaboration on and notifying about datasets (RSS) and interaction with the internal messaging system, that was inherited from panMetaWorks. When a dataset is to be published, panMetaDocs allows to change the publication status of the eSciDoc item from status "private" to "submitted" and prepare the dataset for verification by an external reviewer. After quality checks, the item publication status can be changed to "published". This makes the data and metadata available through the internet worldwide. PanMetaDocs is developed as an eSciDoc application. It is an easy to use graphical user interface to eSciDoc items, their data and metadata. It is also an application supporting a DOI publication agent during the process of

Tracing river runoff and DOC over the East Siberian Shelf using in situ CDOM measurements

Science.gov (United States)

Pugach, Svetlana; Semiletov, Igor; Pipko, Irina

2010-05-01

The Great Siberian Rivers integrate meteorological and hydrological changes in their watersheds and play a significant role in the physical and biogeochemical regime of the Arctic Ocean through transport of fresh water (FW) and carbon into the sea. Since 1994, the Laboratory of Arctic Research POI in cooperation with the IARC UAF investigate the fresh water and carbon fluxes in the Siberian Arctic land-shelf system with the special emphasize in the East Siberian Arctic shelf (ESAS) which represents the widest and shallowest continental shelf in the World Ocean, yet it is still poorly explored. The East Siberian Sea is influenced by water exchange from the eastern Laptev Sea (where local shelf waters are diluted mostly by Lena River discharge) and by inflow of Pacific waters from the Chukchi Sea. This region is characterized by the highest rate of coastal erosion and significant volume of the riverine discharge and exhibits the largest gradients in all oceanographic parameters observed for the entire Arctic Ocean. Here we demonstrate a connection among Chromophoric (or Colored) Dissolved Organic Matter (CDOM) which represents the colored fraction of Dissolved Organic Carbon (DOC), salinity, and pCO2. Our data have documented strong linear correlations between salinity and CDOM in the near shore zone strongly influenced by riverine runoff. Correlation coefficient between CDOM and salinity in surface waters was equal to -0.94, -0.94 and -0.95 for surface water stations in September of 2003, 2004, and 2005, respectively. Combined analysis of CDOM and DOC data demonstrated a high degree of correlation between these parameters (r=0.96). Such close connection between these characteristics of waters in this region makes it possible to restore the distribution of DOC according to our original CDOM data of the profiling systems, such as CTD-Seabird equipped by WETStar CDOM fluorimeter. It is shown that the CDOM can be used as a conservative tracer to follow the transport and

Floodplain Impact on Riverine Dissolved Carbon Cycling in the Mississippi-Atchafalaya River System

Science.gov (United States)

DelDuco, E.; Xu, Y. J.

2017-12-01

as a sink for DOC. In light of increased riverine carbon export due to climate change and enhanced hydrological cycling, low-lying floodplain systems such as the AR may need to be looked to in future years for the filtration and removal of organic materials, which impact coastal margins and ocean ecosystems as a whole.

Master function for the solid:solution equilibrium of DOC in taiga and tundra soils of N. Russia: experimental and modeling results

Science.gov (United States)

Oosterwoud, M. R.; van der Zee, S. E. A. T. M.; Meeussen, J. C. L.; Temminghoff, E. J. M.

2012-04-01

The formation and degradation of Dissolved Organic Carbon (DOC) in arctic environments is intensively investigated, in the context of DOC loading of arctic rivers and seas as well as climate change. However, chemical interaction studies are more scarce, in particular those involving modeling. We investigated DOC interactions in N. Russian taiga and tundra soils, and found that water extractable organic carbon (WEOC) comprises only a small fraction of total organic carbon, whereas DOC is again a small fraction of WEOC. The chemical composition of DOC in terms of humic, fulvic, and hydrophilic acids, the concentrations of dominant cations such as Ca and Al, and the solid iron oxide contents appear to differ profoundly for different soil horizons, as well as between taiga and tundra soils. To reconcile these differences, we processed the data with a simple Freundlich model and with advanced LCD (Ligand and Charge Distribution) modeling of DOC interactions. In the LCD modeling, a combination is made of advances such as CD-MUSIC, and Nica-Donnan approaches, that are implemented in the software ORCHESTRA (though adjusted for computational stability by us). To avoid fitting without good foundation, use is made of the generic parameterization of LCD in combination with measured, site-specific chemical data such as concentrations. We observe that the soil samples from both regions, soil types and horizons can be described with a single DOC sorption Freundlich isotherm. More interestingly, for the same set of samples, the LCD modeling enables us to cast DOC sorption into a single Master Function, that takes iron oxide content and Al and Ca concentrations of soil samples into account in a purely predictive way. Based on this Master Function, it is feasible to assess how DOC is sorbed onto the solid surface. In combination with DOC production and degradation models, our results provide a more balanced instrument to address changes in DOC loading to surface waters due to

Cold storage as a method for the long-term preservation of tropical dissolved organic carbon (DOC

Directory of Open Access Journals (Sweden)

S. Cook

2016-11-01

Full Text Available Fluvial fluxes of dissolved organic carbon (DOC may represent an important loss for terrestrial carbon stores in the tropics. However, there is currently limited guidance on the preservation of tropical water samples for DOC analysis. Commonly employed preservation techniques such as freezing or acidification can limit degradation but may also alter sample properties, complicating DOC analysis. We examined the effects of cold storage at 4 °C on DOC concentration and quality in water samples collected from a tropical peat catchment. Samples were stored in the dark at 4 °C for periods of 6–12 weeks. Freeze/thaw experiments were also made. Mean DOC concentrations in samples stored for six weeks at 4 °C were 6.1 % greater than in samples stored at ambient room temperature (33 °C over the same period. Changes in DOC concentrations, in two sample sets, during cold storage were 2.25 ± 2.9 mg L-1 (8 % to 2.69 ± 1.4 mg L-1 (11 % over a 12-week period. Freeze/thaw resulted in alterations in the optical properties of samples, and this in turn altered the calculated DOC concentrations by an average of 10.9 %. We conclude that cold storage at 4 °C is an acceptable preservation method for tropical DOC water samples, for moderate time periods, and is preferable to freezing or storage at ambient temperatures.

Riverine habitat dynamics

Science.gov (United States)

Jacobson, R.B.

2013-01-01

The physical habitat template is a fundamental influence on riverine ecosystem structure and function. Habitat dynamics refers to the variation in habitat through space and time as the result of varying discharge and varying geomorphology. Habitat dynamics can be assessed at spatial scales ranging from the grain (the smallest resolution at which an organism relates to its environment) to the extent (the broadest resolution inclusive of all space occupied during its life cycle). In addition to a potentially broad range of spatial scales, assessments of habitat dynamics may include dynamics of both occupied and nonoccupied habitat patches because of process interactions among patches. Temporal aspects of riverine habitat dynamics can be categorized into hydrodynamics and morphodynamics. Hydrodynamics refers to habitat variation that results from changes in discharge in the absence of significant change of channel morphology and at generally low sediment-transport rates. Hydrodynamic assessments are useful in cases of relatively high flow exceedance (percent of time a flow is equaled or exceeded) or high critical shear stress, conditions that are applicable in many studies of instream flows. Morphodynamics refers to habitat variation resulting from changes to substrate conditions or channel/floodplain morphology. Morphodynamic assessments are necessary when channel and floodplain boundary conditions have been significantly changed, generally by relatively rare flood events or in rivers with low critical shear stress. Morphodynamic habitat variation can be particularly important as disturbance mechanisms that mediate population growth or for providing conditions needed for reproduction, such as channel-migration events that erode cutbanks and provide new pointbar surfaces for germination of riparian trees. Understanding of habitat dynamics is increasing in importance as societal goals shift toward restoration of riverine ecosystems. Effective investment in restoration

SUBMERGED MACROPHYTE EFFECTS ON NUTRIENT EXCHANGES IN RIVERINE SEDIMENTS

Science.gov (United States)

Submersed macrophytes are important in nutrient cycling in marine and lacustrine systems, although their role in nutrient exchange in tidally-influenced riverine systems is not well studied. In the laboratory, plants significantly lowered porewater nutrient pools of riverine sedi...

Role of microgel formation in scavenging of chromophoric dissolved organic matter and heavy metals in a river-sea system

International Nuclear Information System (INIS)

Shiu, Ruei-Feng; Lee, Chon-Lin

2017-01-01

Highlights: • Different types of DOC polymers forming microgel were compared. • The assembly effectiveness of marine DOC was much higher than riverine DOC. • Types and sources of DOC polymers may control the aquatic microgel abundance. • An alternative route for CDOM and heavy metals removal is presented. • Ecological risk and fate assessments of pollutants may consider the microgel phase. - Abstract: We use riverine and marine dissolved organic carbon (DOC) polymers to examine their aggregation behavior, and to evaluate the roles of microgel formation in scavenging of chromophoric dissolved organic matter (CDOM) and heavy metals in a river-sea system. Our results indicate that riverine and marine microgels did not exhibit very much difference in size and self-assembly curve; however, the assembly effectiveness ([microgel]/DOC) of marine samples was much higher than riverine. Instead of concentration of DOC, other factors such as types and sources of DOC polymers may control the microgel abundance in aquatic environments. After filtering water samples (microgels removed), the CDOM and selected metals (Cu, Ni, Mn) in the filtrate were quantified. CDOM and metals were concurrently removed to an extent via DOC polymer re-aggregation, which also suggested that the microgels had sequestering capability in CDOM and metals. This finding provides an alternative route for CDOM and heavy metals removal from the water column. As such the process of re-aggregation into microgels should then be considered besides traditional phase partitioning in the assessment of the ecological risk and fate of hazardous materials.

Role of microgel formation in scavenging of chromophoric dissolved organic matter and heavy metals in a river-sea system

Energy Technology Data Exchange (ETDEWEB)

Shiu, Ruei-Feng [Department of Marine Environment and Engineering, National Sun Yat-sen University, Kaohsiung, Taiwan (China); Lee, Chon-Lin, E-mail: linnohc@fac.nsysu.edu.tw [Department of Marine Environment and Engineering, National Sun Yat-sen University, Kaohsiung, Taiwan (China); Department of Public Health, College of Health Science, Kaohsiung Medical University, Kaohsiung, Taiwan (China); Asia-Pacific Ocean Research Center, National Sun Yat-sen University, Kaohsiung, Taiwan (China); Research Center for Environmental Medicine, Kaohsiung Medical University, Kaohsiung, Taiwan (China)

2017-04-15

Highlights: • Different types of DOC polymers forming microgel were compared. • The assembly effectiveness of marine DOC was much higher than riverine DOC. • Types and sources of DOC polymers may control the aquatic microgel abundance. • An alternative route for CDOM and heavy metals removal is presented. • Ecological risk and fate assessments of pollutants may consider the microgel phase. - Abstract: We use riverine and marine dissolved organic carbon (DOC) polymers to examine their aggregation behavior, and to evaluate the roles of microgel formation in scavenging of chromophoric dissolved organic matter (CDOM) and heavy metals in a river-sea system. Our results indicate that riverine and marine microgels did not exhibit very much difference in size and self-assembly curve; however, the assembly effectiveness ([microgel]/DOC) of marine samples was much higher than riverine. Instead of concentration of DOC, other factors such as types and sources of DOC polymers may control the microgel abundance in aquatic environments. After filtering water samples (microgels removed), the CDOM and selected metals (Cu, Ni, Mn) in the filtrate were quantified. CDOM and metals were concurrently removed to an extent via DOC polymer re-aggregation, which also suggested that the microgels had sequestering capability in CDOM and metals. This finding provides an alternative route for CDOM and heavy metals removal from the water column. As such the process of re-aggregation into microgels should then be considered besides traditional phase partitioning in the assessment of the ecological risk and fate of hazardous materials.

The two faces of DOC.

Science.gov (United States)

Wood, Chris M; Al-Reasi, H A; Smith, D Scott

2011-10-01

Dissolved organic carbon (DOC), through its ability to complex metals and thereby reduce their bioavailability, plays a major role in ameliorating metal toxicity in natural waters. Indeed DOC is a key variable in the Biotic Ligand Model (BLM) for predicting metal toxicity on a site-specific basis. However, recent evidence indicates that all DOCs are not alike, but rather heterogeneous in their ability to protect organisms against metal toxicity, at least in fresh water. The degree of protection appears to correlate with optical properties, such that dark, aromatic-rich compounds of allochthonous origin, with greater humic acid content, are more effective in this regard, particularly against Cu, Ag, and Pb toxicity. The specific absorption coefficient of the DOC in the 300-350nm range (SAC(300-350)) has proven to be a simple and effective index of this protective ability. PARAFAC, a multivariate statistical technique for analysis of excitation-emission fluorescence spectroscopy data, also holds promise for quantifying the humic-like and fulvic-like fluorophores, which tend to be positively and negatively correlated with protective ability, respectively. However, what has been largely missing in the toxicological realm is any appreciation that DOC may also affect the physiology of target organisms, such that part of the protection may occur by a mechanism other than metal complexation. Recently published evidence demonstrates that DOC has effects on Na(+) transport, diffusive permeability, and electrical properties of the gills in fish and crustaceans in a manner which will promote Na(+) homeostasis. These actions could thereby protect against metal toxicity by physiological mechanisms. Future research should investigate potential direct interactions of DOC molecules with the branchial epithelium. Incorporation of optical properties of DOC could be used to improve the predictive capabilities of the BLM. 2011 Elsevier B.V. All rights reserved.

Land use mediates riverine nitrogen export under the dominant influence of human activities

Science.gov (United States)

Chen, Binhui; Chang, Scott X.; Lam, Shu Kee; Erisman, Jan Willem; Gu, Baojing

2017-09-01

Riverine nitrogen (N) export is a crucial process that links upstream and downstream ecosystems and coastal zones. However, the driving forces of riverine N export that is closely related to water N pollution are still not well understood. In this study, we used a mass balance approach to quantify the sources of N discharge and analyzed the effect of land use composition on riverine N export, taking Zhejiang Province, China as a case study. We found that the total reactive N discharge to rivers in Zhejiang increased from 0.22 to 0.26 Tg yr-1 from 2000 to 2015. At the watershed scale, our estimate of N export agrees well with the monitored riverine N concentration in the eight major watersheds in Zhejiang. Direct discharge of domestic wastewater and effluents from wastewater treatment plants are dominant sources of riverine N export, followed by agricultural non-point sources. Although riverine N export increases with the increasing proportion of urban and agricultural land uses, we did not find any relationship between land use change and changes in riverine N export. This suggests that the dominant factor affecting riverine N export should be human activities (e.g. wastewater discharge and fertilization level), while land use only mediates riverine N export.

Influence of fresh water, nutrients and DOC in two submarine-groundwater-fed estuaries on the west of Ireland.

Science.gov (United States)

Smith, Aisling M; Cave, Rachel R

2012-11-01

Coastal fresh water sources, which discharge to the sea are expected to be directly influenced by climate change (e.g. increased frequency of extreme weather events). Sea-level rise and changes in rainfall patterns, changes in demand for drinking water and contamination caused by population and land use change, will also have an impact. Coastal waters with submarine groundwater discharge are of particular interest as this fresh water source is very poorly quantified. Two adjacent bays which host shellfish aquaculture sites along the coast of Co. Galway in the west of Ireland have been studied to establish the influence of fresh water inputs on nutrients and dissolved organic carbon (DOC) in each bay. Neither bay has riverine input and both are underlain by the karst limestone of the Burren and are susceptible to submarine groundwater discharge. Water and suspended matter samples were collected half hourly over 13 h tidal cycles over several seasons. Water samples were analysed for nutrients and DOC, while suspended matter was analysed for organic/inorganic content. Temperature and salinity measurements were recorded during each tidal station by SBE 37 MicroCAT conductivity/temperature sensors. Long-term mooring data were used to track freshwater input for Kinvara and Aughinish Bays and compare it with rainfall data. Results show that Kinvara Bay is much more heavily influenced by fresh water input than Aughinish Bay, and this is a strong source of fixed nitrogen to Kinvara Bay. Only during flood events is there a significant input of inorganic nitrogen from fresh water to Aughinish Bay, such as in late November 2009. Fresh water input does not appear to be a significant source of dissolved inorganic phosphate (DIP) to either bay, but is a source of DOC to both bays. C:N ratios of DOC/DON show a clear distinction between marine and terrestrially derived dissolved organic material. Copyright © 2012. Published by Elsevier B.V.

Fluorescence measured in situ as a proxy of CDOM absorption and DOC concentration in the Baltic Sea

Directory of Open Access Journals (Sweden)

Piotr Kowalczuk

2010-09-01

measured in filtered and raw water (R2 = 0.61 and R2 = 0.56. The seasonal cycle had an impact on the relationship between DOC and CDOM optical properties. The hyperbolic relationships between aCDOM(370 vs. carbon-specific absorption coefficient a*CDOM(370, and IFl vs. the ratio of fluorescence intensity to organic carbon concentration IFl/DOC were very good. The discharge and mixing of riverine waters is a primary driver of variability in DOC and CDOM optical properties in the surface waters of the southern Baltic Sea, since all the parameters considered are negatively correlated with salinity. It was found that there was a positive trend of increasing values of DOM optical parameters with salinity increase (within a range of 8-12 in deep water below the permanent pycnocline. Evidence is also presented to show that late-summer photodegradation was responsible for the depletion of CDOM florescence intensities in the mixed layer above the seasonal thermocline. It was further demonstrated that the DOC concentration increases in the stagnant waters of the Baltic Sea deeps. The Integrated Optical-Hydrological Probe, which registers high-resolution vertical profiles of salinity, temperature, CDOM and the optical properties of water, confirmed that DOM optical proxies can be used in studies of DOM biogeochemical cycles in the Baltic Sea.

Molecular signatures of biogeochemical transformations in dissolved organic matter from ten World Rivers

Directory of Open Access Journals (Sweden)

Thomas Riedel

2016-09-01

Full Text Available Rivers carry large amounts of dissolved organic matter (DOM to the oceans thereby connecting terrestrial and marine element cycles. Photo-degradation in conjunction with microbial turnover is considered a major pathway by which terrigenous DOM is decomposed. To reveal globally relevant patterns behind this process, we performed photo-degradation experiments and year-long bio-assays on DOM from ten of the largest world rivers that collectively account for more than one-third of the fresh water discharge to the global ocean. We furthermore tested the hypothesis that the terrigenous component in deep ocean DOM may be far higher than biomarker studies suggest, because of the selective photochemical destruction of characteristic biomolecules from vascular plants. DOM was molecularly characterized by a combination of non-targeted ultrahigh-resolution mass spectrometry and quantitative molecular tracer analyses. We show that the reactivity of DOM is globally related to broad catchment properties. Basins that are dominated by forest and grassland export more photo-degradable DOM than other rivers. Chromophoric compounds are mainly vascular plant-derived polyphenols, and partially carry a pyrogenic signature from vegetation fires. These forest and grassland dominated rivers lost up to 50% of dissolved organic carbon (DOC during irradiation, and up to 85% of DOC was lost in total if subsequently bio-incubated for one year. Basins covered by cropland, on the other hand, export DOM with a higher proportion of photo-resistant and bio-available DOM which is enriched in nitrogen. In these rivers, 30% or less of DOC was photodegraded. Consistent with previous studies, we found that riverine DOM resembled marine DOM in its broad molecular composition after extensive degradation, mainly due to almost complete removal of aromatics. More detailed molecular fingerprinting analysis (based on the relative abundance of >4000 DOM molecular formulae, however, revealed

Deforestation in Amazonia impacts riverine carbon dynamics

Science.gov (United States)

Langerwisch, Fanny; Walz, Ariane; Rammig, Anja; Tietjen, Britta; Thonicke, Kirsten; Cramer, Wolfgang

2016-12-01

Fluxes of organic and inorganic carbon within the Amazon basin are considerably controlled by annual flooding, which triggers the export of terrigenous organic material to the river and ultimately to the Atlantic Ocean. The amount of carbon imported to the river and the further conversion, transport and export of it depend on temperature, atmospheric CO2, terrestrial productivity and carbon storage, as well as discharge. Both terrestrial productivity and discharge are influenced by climate and land use change. The coupled LPJmL and RivCM model system (Langerwisch et al., 2016) has been applied to assess the combined impacts of climate and land use change on the Amazon riverine carbon dynamics. Vegetation dynamics (in LPJmL) as well as export and conversion of terrigenous carbon to and within the river (RivCM) are included. The model system has been applied for the years 1901 to 2099 under two deforestation scenarios and with climate forcing of three SRES emission scenarios, each for five climate models. We find that high deforestation (business-as-usual scenario) will strongly decrease (locally by up to 90 %) riverine particulate and dissolved organic carbon amount until the end of the current century. At the same time, increase in discharge leaves net carbon transport during the first decades of the century roughly unchanged only if a sufficient area is still forested. After 2050 the amount of transported carbon will decrease drastically. In contrast to that, increased temperature and atmospheric CO2 concentration determine the amount of riverine inorganic carbon stored in the Amazon basin. Higher atmospheric CO2 concentrations increase riverine inorganic carbon amount by up to 20 % (SRES A2). The changes in riverine carbon fluxes have direct effects on carbon export, either to the atmosphere via outgassing or to the Atlantic Ocean via discharge. The outgassed carbon will increase slightly in the Amazon basin, but can be regionally reduced by up to 60 % due to

Cycling of 7Be and 210Pb in a high DOC, shallow, turbid estuary of south-east Texas

International Nuclear Information System (INIS)

Baskaran, M.; Ravichandran, M.; Bianchi, T.S.

1997-01-01

The Sabine-Neches estuary is a shallow, turbid estuary in south-east Texas with high concentrations of dissolved organic carbon (DOC). The sediment inventory of 210 Pb and 239 , 240 Pu indicates that only a fraction of the particle-associated nuclides that reach the estuary were retained in the sediment. To better understand the cause for this low-sediment inventory of particle-reactive nuclides, 7 Be and 210 Pb concentrations have been measured in the dissolved and particulate phases, in addition to the DOC and suspended particle concentrations. The ratios of dissolved to particulate concentrations of 7 Be and 210 Pb were generally higher than in most other coastal waters. The dissolved residence times of 7 Be and 210 Pb (accounting for riverine input) varied between 0.6 and 9.6 days and 1.7 and 9.8 days, respectively. Distribution coefficients (Kd) ranged between 1500 and 87 100 cm 3 g -1 for 7 Be and 2600 and 37 000 cm 3 g -1 for 210 Pb. These K d s are lower than those reported for most coastal waters. There was no significant correlation between suspended particle concentration and K d of either 7 Be and 210 Pb; this has been observed for many other particle-reactive nuclides, suggesting that particle is not the primary controlling variable for the removal of particle-reactive nuclides in these high DOC waters. The average particle residence time in this estuary is ∼ 2 days. The relatively low K d values, longer dissolved residence times of 7 Be and 210 Pb, longer particle residence times and shorter hydraulic residence times compared to other coastal areas, result in only a partial removal of particle-reactive radionuclides in this estuary. (author)

Investigating Forest Harvest Effects on DOC Concentration and Quality: An In Situ, High Resolution Approach to Quantifying DOC Export Dynamics

Science.gov (United States)

Jollymore, A. J.; Johnson, M. S.; Hawthorne, I.

2013-12-01

Justification: Forest harvest effects on water quality can signal alterations in hydrologic and ecologic processes incurred as a result of forest harvest activities. Organic matter (OM), specifically dissolved organic carbon (DOC), plays a number of important roles mediating UV-light penetration, redox reactivity and microbial activity within aquatic ecosystems. Quantification of DOC is typically pursued via grab sampling followed by chemical or spectrophotometric analysis, limiting the temporal resolution obtained as well as the accuracy of export calculations. The advent of field-deployable sensors capable of measuring DOC concentration and certain quality characteristics in situ provides the ability to observe dynamics at temporal scales necessary for accurate calculation of DOC flux, as well as the observation of dynamic changes in DOC quality on timescales impossible to observe through grab sampling. Methods: This study utilizes a field deployable UV-Vis spectrophotometer (spectro::lyzer, s::can, Austria) to investigate how forest harvest affects DOC export. The sensor was installed at an existing hydrologic monitoring site at the outlet of a headwater stream draining a small (91 hectare) second growth Douglasfir-dominated catchment near Campbell River on Vancouver Island, British Columbia. Measurement began late in 2009, prior to forest harvest and associated activities such as road building (which commenced in October 2010 and ended in early 2011), and continues to present. During this time - encompassing the pre, during and post-harvest conditions - the absorbance spectrum of stream water from 200 to 750 nm was measured. DOC concentration and spectroscopic indices related to DOC quality (including SUVA, which relates to the concentration of aromatic carbon, and spectral slope) were subsequently calculated for each spectra obtained at 30-minute intervals. Results and conclusions: High frequency measurements of DOC show that overall export of OM increased in

Role of microgel formation in scavenging of chromophoric dissolved organic matter and heavy metals in a river-sea system.

Science.gov (United States)

Shiu, Ruei-Feng; Lee, Chon-Lin

2017-04-15

We use riverine and marine dissolved organic carbon (DOC) polymers to examine their aggregation behavior, and to evaluate the roles of microgel formation in scavenging of chromophoric dissolved organic matter (CDOM) and heavy metals in a river-sea system. Our results indicate that riverine and marine microgels did not exhibit very much difference in size and self-assembly curve; however, the assembly effectiveness ([microgel]/DOC) of marine samples was much higher than riverine. Instead of concentration of DOC, other factors such as types and sources of DOC polymers may control the microgel abundance in aquatic environments. After filtering water samples (microgels removed), the CDOM and selected metals (Cu, Ni, Mn) in the filtrate were quantified. CDOM and metals were concurrently removed to an extent via DOC polymer re-aggregation, which also suggested that the microgels had sequestering capability in CDOM and metals. This finding provides an alternative route for CDOM and heavy metals removal from the water column. As such the process of re-aggregation into microgels should then be considered besides traditional phase partitioning in the assessment of the ecological risk and fate of hazardous materials. Copyright © 2017 Elsevier B.V. All rights reserved.

76 FR 9210 - Draft DOC National Aquaculture Policy

Science.gov (United States)

2011-02-16

... DEPARTMENT OF COMMERCE Draft DOC National Aquaculture Policy AGENCY: Commerce. ACTION: Notice of availability of draft aquaculture policy; request for comments. SUMMARY: The Department of Commerce (DOC) is... United States. The intent of the policy is to guide DOC's actions and decisions on aquaculture and to...

CDOM-DOC relationship in contrasted coastal waters: implication for DOC retrieval from ocean color remote sensing observation.

Science.gov (United States)

Vantrepotte, Vincent; Danhiez, François-Pierre; Loisel, Hubert; Ouillon, Sylvain; Mériaux, Xavier; Cauvin, Arnaud; Dessailly, David

2015-01-12

Increasing our knowledge on dissolved organic carbon (DOC) spatio-temporal distribution in the coastal ocean represents a crucial challenge for better understanding the role of these ecosystems in the global oceanic carbon cycle. The assessment of DOC concentration from the absorption properties of the colored part of the dissolved organic matter (a(cdom)) was investigated from an extensive data set covering a variety of coastal environments. Our results confirmed that variation in the a(cdom)(412) to DOC ratio (a*(cdom)(412)) can be depicted from the CDOM spectral slope in the UV domain (S(275-295)). They also evidenced that regional first order variation in both a*(cdom)(412) and S(275-295) are highly correlated to variation in a(cdom)(412). From these observations, generalized relationships for estimating a*(cdom)(412) from S(275-295) or a(cdom)(412) were parameterized from our development sites (N = 158; English Channel, French Guiana, Hai Phong Bay) and tested against an independent data set covering others coastal regions (N = 223; French Polynesia, Rhone River estuary, Gulf of Maine, Chesapeake Bay, Southern Middle Atlantic Bight) demonstrating the possibility to derive DOC estimates from in situ CDOM optical properties with an average accuracy of ~16% over very contrasted coastal environments (with DOC ranging from 50 to 250 µmol.L(-1)). The applicability of these generalized approaches was evaluated in the context of ocean color remote sensing observation emphasizing the limits of S(275-295)-based formulations and the potential for a(cdom)-based approaches to represent a compelling alternative for assessing synoptic DOC distribution.

Latitudinal gradients in degradation of marine dissolved organic carbon.

Directory of Open Access Journals (Sweden)

Carol Arnosti

Full Text Available Heterotrophic microbial communities cycle nearly half of net primary productivity in the ocean, and play a particularly important role in transformations of dissolved organic carbon (DOC. The specific means by which these communities mediate the transformations of organic carbon are largely unknown, since the vast majority of marine bacteria have not been isolated in culture, and most measurements of DOC degradation rates have focused on uptake and metabolism of either bulk DOC or of simple model compounds (e.g. specific amino acids or sugars. Genomic investigations provide information about the potential capabilities of organisms and communities but not the extent to which such potential is expressed. We tested directly the capabilities of heterotrophic microbial communities in surface ocean waters at 32 stations spanning latitudes from 76°S to 79°N to hydrolyze a range of high molecular weight organic substrates and thereby initiate organic matter degradation. These data demonstrate the existence of a latitudinal gradient in the range of complex substrates available to heterotrophic microbial communities, paralleling the global gradient in bacterial species richness. As changing climate increasingly affects the marine environment, changes in the spectrum of substrates accessible by microbial communities may lead to shifts in the location and rate at which marine DOC is respired. Since the inventory of DOC in the ocean is comparable in magnitude to the atmospheric CO(2 reservoir, such a change could profoundly affect the global carbon cycle.

Decreasing soil water Ca2+ reduces DOC adsorption in mineral soils: implications for long-term DOC trends in an upland forested catchment in southern Ontario, Canada.

Science.gov (United States)

Kerr, Jason Grainger; Eimers, M Catherine

2012-06-15

Positive trends in dissolved organic carbon (DOC) concentration have been observed in surface waters throughout North America and northern Europe. Although adsorption in mineral soils is an important driver of DOC in upland streams, little is known about the potential for changes in DOC adsorption to contribute to these trends. We hypothesized that long-term declines in soil water Ca(2+) levels, in response to declining acid deposition, might influence DOC adsorption and that this could contribute to long-term DOC trends in an upland forested catchment in south-central Ontario, Canada. Between 1987 and 2009, DOC concentrations increased significantly (pDOC concentration (DOC(np)), which is a measure of the soil water DOC concentration at equilibrium with the soil, ranged from 1.27 to 3.75 mg L(-1) in B horizon soils. This was similar to the mean DOC concentrations of B horizon soil water (2.04-6.30 mg L(-1)) and stream water (2.20 mg L(-1)), indicating that soil and stream water DOC concentrations are controlled by equilibrium processes at the soil-water interface. Adsorption experiments using variable Ca(2+) concentrations demonstrated that as Ca(2+) decreased the DOC(np) increased (1.96 to 4.74 mg L(-1)), which was consistent with the observed negative correlation between DOC and Ca(2+) in B horizon soil water (pDOC adsorption (p>0.05), indicating that changes in DOC adsorption might be related to cation bridging. We conclude that declines in soil water Ca(2+) concentration can contribute to increasing DOC trends in upland streams by reducing DOC adsorption in mineral soils. Copyright © 2012 Elsevier B.V. All rights reserved.

Earth System Documentation (ES-DOC) Preparation for CMIP6

Science.gov (United States)

Denvil, S.; Murphy, S.; Greenslade, M. A.; Lawrence, B.; Guilyardi, E.; Pascoe, C.; Treshanksy, A.; Elkington, M.; Hibling, E.; Hassell, D.

2015-12-01

During the course of 2015 the Earth System Documentation (ES-DOC) project began its preparations for CMIP6 (Coupled Model Inter-comparison Project 6) by further extending the ES-DOC tooling ecosystem in support of Earth System Model (ESM) documentation creation, search, viewing & comparison. The ES-DOC online questionnaire, the ES-DOC desktop notebook, and the ES-DOC python toolkit will serve as multiple complementary pathways to generating CMIP6 documentation. It is envisaged that institutes will leverage these tools at different points of the CMIP6 lifecycle. Institutes will be particularly interested to know that the documentation burden will be either streamlined or completely automated.As all the tools are tightly integrated with the ES-DOC web-service, institutes can be confident that the latency between documentation creation & publishing will be reduced to a minimum. Published documents will be viewable with the online ES-DOC Viewer (accessible via citable URL's). Model inter-comparison scenarios will be supported using the ES-DOC online Comparator tool. The Comparator is being extended to:• Support comparison of both Model descriptions & Simulation runs;• Greatly streamline the effort involved in compiling official tables.The entire ES-DOC ecosystem is open source and built upon open standards such as the Common Information Model (CIM) (versions 1 and 2).

DOC-dynamics in a small headwater catchment as driven by redox fluctuations and hydrological flow paths – are DOC exports mediated by iron reduction/oxidation cycles?

Directory of Open Access Journals (Sweden)

K.-H. Knorr

2013-02-01

Full Text Available Dissolved organic carbon (DOC exports from many catchments in Europe and North-America are steadily increasing. Several studies have sought to explain this observation. As possible causes, a decrease in acid rain or sulfate deposition, concomitant reductions in ionic strength and increasing temperatures were identified. DOC often originates from riparian wetlands; but here, despite higher DOC concentrations, ionic strength in pore waters usually exceeds that in surface waters. In the catchment under study, DOC concentrations were synchronous with dissolved iron concentrations in pore and stream water. This study aims at testing the hypothesis that DOC exports are mediated by iron reduction/oxidation cycles. Following the observed hydrographs, δ¹⁸O of water and DOC fluorescence, the wetlands were identified as the main source of DOC. Antecedent biogeochemical conditions, i.e., water table levels in the wetlands, influenced the discharge patterns of nitrate, iron and DOC during an event. The correlation of DOC with pH was positive in pore waters, but negative in surface waters; it was negative for DOC with sulfate in pore waters, but only weak in surface waters. Though, the positive correlation of DOC with iron was universal for pore and surface water. The decline of DOC and iron concentrations in transition from anoxic wetland pore water to oxic stream water suggests a flocculation of DOC with oxidising iron, leading to a drop in pH in the stream during high DOC fluxes. The pore water did not per se differ in pH. There is, thus, a need to consider processes more thoroughly of DOC mobilisation in wetlands when interpreting DOC exports from catchments. The coupling of DOC with iron fluxes suggested that increased DOC exports could at least, in part, be caused by increasing activities in iron reduction, possibly due to increases in temperature, increasing wetness of riparian wetlands, or by a shift from sulfate dominated to iron

DocSaludMental en netvibes

OpenAIRE

Onís, Ricardo

2011-01-01

DocSaludMental es un escritorio virtual que, a partir de la plataforma netvibes, permite el acceso a información especializada y actualizada mediante la sindicación de contenidos a todos los profesionales de la red de salud mental en el Principado de Asturias DocSaludMental is a virtual desktop that allows access to expert information and updated from content syndication to all professionals in the mental health network in the Principality of Asturias

Are we meeting the challenges of landscape-scale riverine research? A review

Science.gov (United States)

E. Ashley Steel; Robert M. Hughes; Aimee H. Fullerton; Stefan Schmutz; John A. Young; Michio Fukushima; Susanne Muhar; Michaela Poppe; Blake E. Feist; Clemens. Trautwein

2010-01-01

Identifying and quantifying relationships among landscape patterns, anthropogenic disturbances, and aquatic ecosystems is a new and rapidly developing approach to riverine ecology. In this review, we begin by describing the policy and management drivers for landscape-scale riverine research and we synthesize the technological advances that have enabled dramatic...

Climate change increases riverine carbon outgassing, while export to the ocean remains uncertain

Science.gov (United States)

Langerwisch, F.; Walz, A.; Rammig, A.; Tietjen, B.; Thonicke, K.; Cramer, W.

2016-07-01

Any regular interaction of land and river during flooding affects carbon pools within the terrestrial system, riverine carbon and carbon exported from the system. In the Amazon basin carbon fluxes are considerably influenced by annual flooding, during which terrigenous organic material is imported to the river. The Amazon basin therefore represents an excellent example of a tightly coupled terrestrial-riverine system. The processes of generation, conversion and transport of organic carbon in such a coupled terrigenous-riverine system strongly interact and are climate-sensitive, yet their functioning is rarely considered in Earth system models and their response to climate change is still largely unknown. To quantify regional and global carbon budgets and climate change effects on carbon pools and carbon fluxes, it is important to account for the coupling between the land, the river, the ocean and the atmosphere. We developed the RIVerine Carbon Model (RivCM), which is directly coupled to the well-established dynamic vegetation and hydrology model LPJmL, in order to account for this large-scale coupling. We evaluate RivCM with observational data and show that some of the values are reproduced quite well by the model, while we see large deviations for other variables. This is mainly caused by some simplifications we assumed. Our evaluation shows that it is possible to reproduce large-scale carbon transport across a river system but that this involves large uncertainties. Acknowledging these uncertainties, we estimate the potential changes in riverine carbon by applying RivCM for climate forcing from five climate models and three CO2 emission scenarios (Special Report on Emissions Scenarios, SRES). We find that climate change causes a doubling of riverine organic carbon in the southern and western basin while reducing it by 20 % in the eastern and northern parts. In contrast, the amount of riverine inorganic carbon shows a 2- to 3-fold increase in the entire basin

Phylogeographic analysis reveals northerly refugia for the riverine amphibian Triturus dobrogicus (Caudata: Salamandridae)

Czech Academy of Sciences Publication Activity Database

Vörös, J.; Mikulíček, Peter; Major, Á.; Recuero, E.; Arntzen, J. W.

2016-01-01

Roč. 119, č. 4 (2016), s. 974-991 ISSN 0024-4066 Institutional support: RVO:68081766 Keywords : Danube River * microsatellites * mitochondrial DNA * newt * riverine barrier * riverine dispersal * Sava River Subject RIV: EG - Zoology Impact factor: 2.288, year: 2016

Modeling pathways of riverine nitrogen and phosphorus in the Baltic Sea

Science.gov (United States)

Radtke, H.; Neumann, T.; Voss, M.; Fennel, W.

2012-09-01

A better understanding of the fate of nutrients entering the Baltic Sea ecosystem is an important issue with implications for environmental management. There are two sources of nitrogen and phosphorus: riverine input and atmospheric deposition. In the case of nitrogen, the fixation of dinitrogen by diazotrophic bacteria represents a third source. From an analysis of stable nitrogen isotope ratios it was suggested that most of the riverine nitrogen is sequestered in the coastal rim, specifically along the southern Baltic Sea coast with its coarse sediments, whereas nitrogen from fixation dominates the central basins. However, pathways of nutrients and timescales between the input of the nutrients and their arrival in different basins are difficult to obtain from direct measurements. To elucidate this problem, we use a source attribution technique in a three-dimensional ecosystem model, ERGOM, to track nutrients originating from various rivers. An “age” variable is attributed to the marked elements to indicate their propagation speeds and residence times. In this paper, we specifically investigate the spreading of nitrogen and phosphorus from the riverine discharges of the Oder, Vistula, Neman and Daugava. We demonstrate which regions they are transported to and for how long they remain in the ecosystem. The model results show good agreement with source estimations from observed δ15N values in sediments. The model results suggest that 95% of nitrogen is lost by denitrification in sediments, after an average time of 1.4 years for riverine nitrogen. The residence time of riverine phosphorus is much longer and exceeds our simulated period of 35 years.

Influence of allochthonous dissolved organic matter on pelagic basal production in a northerly estuary

Science.gov (United States)

Andersson, A.; Brugel, S.; Paczkowska, J.; Rowe, O. F.; Figueroa, D.; Kratzer, S.; Legrand, C.

2018-05-01

Phytoplankton and heterotrophic bacteria are key groups at the base of aquatic food webs. In estuaries receiving riverine water with a high content of coloured allochthonous dissolved organic matter (ADOM), phytoplankton primary production may be reduced, while bacterial production is favoured. We tested this hypothesis by performing a field study in a northerly estuary receiving nutrient-poor, ADOM-rich riverine water, and analyzing results using multivariate statistics. Throughout the productive season, and especially during the spring river flush, the production and growth rate of heterotrophic bacteria were stimulated by the riverine inflow of dissolved organic carbon (DOC). In contrast, primary production and photosynthetic efficiency (i.e. phytoplankton growth rate) were negatively affected by DOC. Primary production related positively to phosphorus, which is the limiting nutrient in the area. In the upper estuary where DOC concentrations were the highest, the heterotrophic bacterial production constituted almost 100% of the basal production (sum of primary and bacterial production) during spring, while during summer the primary and bacterial production were approximately equal. Our study shows that riverine DOC had a strong negative influence on coastal phytoplankton production, likely due to light attenuation. On the other hand DOC showed a positive influence on bacterial production since it represents a supplementary food source. Thus, in boreal regions where climate change will cause increased river inflow to coastal waters, the balance between phytoplankton and bacterial production is likely to be changed, favouring bacteria. The pelagic food web structure and overall productivity will in turn be altered.

Spatiotemporal Characterization of Chromophoric Dissolved Organic Matter (CDOM and CDOM-DOC Relationships for Highly Polluted Rivers

Directory of Open Access Journals (Sweden)

Sijia Li

2016-09-01

Full Text Available Spectral characteristics of CDOM (Chromophoric dissolved organic matter in water columns are a key parameter for bio-optical modeling. Knowledge of CDOM optical properties and spatial discrepancy based on the relationship between water quality and spectral parameters in the Yinma River watershed with in situ data collected from highly polluted waters are exhibited in this study. Based on the comprehensive index method, the riverine waters showed serious contamination; especially the chemical oxygen demand (COD, iron (Fe, manganese (Mn, mercury (Hg and dissolved oxygen (DO were out of range of the contamination warning. Dissolved organic carbon (DOC and total suspended matter (TSM with prominent non-homogenizing were significantly high in the riverine waters, but chlorophyll-a (Chl-a was the opposite. The ternary phase diagram showed that non-algal particle absorption played an important role in total non-water light absorption (>50% in most sampling locations, and mean contributions of CDOM were 13% and 22% in the summer and autumn, respectively. The analysis of the ratio of absorption at 250–365 nm (E250:365 and the spectral slope (S275–295 indicated that CDOM had higher aromaticity and molecular weight in autumn than in summer, which is consistent with the results of water quality and the CDOM relative contribution rate. Redundancy analysis (RDA indicated that the environmental variables OSM (Organic suspended matter had a strong correlation with CDOM absorption, followed by heavy metals, e.g., Mn, Hg and Cr6+. However, for the specific UV absorbance (SUVA254, the seasonal values showed opposite results compared with the reported literature. The potential reasons were that more UDOM (uncolored dissolved organic matter from human sources (wastewater effluent existed in the waters. Terrigenous inputs simultaneously are in relation to the aCDOM(440-DOC relationship with the correlation coefficient of 0.90 in the summer (two-tailed, p < 0

Natural organic matter and sunlight accelerate the degradation of 17ss-estradiol in water

International Nuclear Information System (INIS)

Leech, Dina M.; Snyder, Matthew T.; Wetzel, Robert G.

2009-01-01

Nanomolar concentrations of steroid hormones such as 17β-estradiol can influence the reproductive development and sex ratios of invertebrate and vertebrate populations. Thus their release into surface and ground waters from wastewater facilities and agricultural applications of animal waste is of environmental concern. Many of these compounds are chromophoric and susceptible to photolytic degradation. High intensity UV-C radiation has been demonstrated to degrade some of these compounds in engineered systems. However, the degradation efficacy of natural solar radiation in shallow fresh waters is less understood. Here photolytic experiments with 17β-estradiol demonstrated modest photodegradation (∼ 26%) when exposed to simulated sunlight between 290 and 720 nm. Photodegradation significantly increased (∼ 40-50%) in the presence of 2.0-15.0 mg/l of dissolved organic carbon (DOC) derived from humic acids of the Suwannee River, GA. However, rates of photodegradation reached a threshold at approximately 5.0 mg/l DOC. Observed suppression of photolysis in the presence of a radical inhibitor (i.e. 2-propanol) indicated that a significant proportion of the degradation was due to radicals formed from the photolysis of DOC. Although photodegradation was greatest in full sunlight containing UV-B (290-320 nm), degradation was also detected with UV-A (320-400 nm) and visible light (400-720 nm) alone

Natural organic matter and sunlight accelerate the degradation of 17ss-estradiol in water

Energy Technology Data Exchange (ETDEWEB)

Leech, Dina M. [Institute of Marine Sciences, University of North Carolina at Chapel Hill, 3431 Arendell Street, Morehead City, NC 28557 (United States)], E-mail: dmleech@email.unc.edu; Snyder, Matthew T.; Wetzel, Robert G. [Department of Environmental Sciences and Engineering, School of Public Health, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599 (United States)

2009-03-01

Nanomolar concentrations of steroid hormones such as 17{beta}-estradiol can influence the reproductive development and sex ratios of invertebrate and vertebrate populations. Thus their release into surface and ground waters from wastewater facilities and agricultural applications of animal waste is of environmental concern. Many of these compounds are chromophoric and susceptible to photolytic degradation. High intensity UV-C radiation has been demonstrated to degrade some of these compounds in engineered systems. However, the degradation efficacy of natural solar radiation in shallow fresh waters is less understood. Here photolytic experiments with 17{beta}-estradiol demonstrated modest photodegradation ({approx} 26%) when exposed to simulated sunlight between 290 and 720 nm. Photodegradation significantly increased ({approx} 40-50%) in the presence of 2.0-15.0 mg/l of dissolved organic carbon (DOC) derived from humic acids of the Suwannee River, GA. However, rates of photodegradation reached a threshold at approximately 5.0 mg/l DOC. Observed suppression of photolysis in the presence of a radical inhibitor (i.e. 2-propanol) indicated that a significant proportion of the degradation was due to radicals formed from the photolysis of DOC. Although photodegradation was greatest in full sunlight containing UV-B (290-320 nm), degradation was also detected with UV-A (320-400 nm) and visible light (400-720 nm) alone.

48 CFR 1329.203-70 - DOC Federal tax exemption.

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2010-10-01

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Rapid response of hydrological loss of DOC to water table drawdown and warming in Zoige peatland: results from a mesocosm experiment.

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Lou, Xue-Dong; Zhai, Sheng-Qiang; Kang, Bing; Hu, Ya-Lin; Hu, Li-Le

2014-01-01

A large portion of the global carbon pool is stored in peatlands, which are sensitive to a changing environment conditions. The hydrological loss of dissolved organic carbon (DOC) is believed to play a key role in determining the carbon balance in peatlands. Zoige peatland, the largest peat store in China, is experiencing climatic warming and drying as well as experiencing severe artificial drainage. Using a fully crossed factorial design, we experimentally manipulated temperature and controlled the water tables in large mesocosms containing intact peat monoliths. Specifically, we determined the impact of warming and water table position on the hydrological loss of DOC, the exported amounts, concentrations and qualities of DOC, and the discharge volume in Zoige peatland. Our results revealed that of the water table position had a greater impact on DOC export than the warming treatment, which showed no interactive effects with the water table treatment. Both DOC concentration and discharge volume were significantly increased when water table drawdown, while only the DOC concentration was significantly promoted by warming treatment. Annual DOC export was increased by 69% and 102% when the water table, controlled at 0 cm, was experimentally lowered by -10 cm and -20 cm. Increases in colored and aromatic constituents of DOC (measured by Abs(254 nm), SUVA(254 nm), Abs(400 nm), and SUVA(400 nm)) were observed under the lower water tables and at the higher peat temperature. Our results provide an indication of the potential impacts of climatic change and anthropogenic drainage on the carbon cycle and/or water storage in a peatland and simultaneously imply the likelihood of potential damage to downstream ecosystems. Furthermore, our results highlight the need for local protection and sustainable development, as well as suggest that more research is required to better understand the impacts of climatic change and artificial disturbances on peatland degradation.

Rapid response of hydrological loss of DOC to water table drawdown and warming in Zoige peatland: results from a mesocosm experiment.

Directory of Open Access Journals (Sweden)

Xue-Dong Lou

Full Text Available A large portion of the global carbon pool is stored in peatlands, which are sensitive to a changing environment conditions. The hydrological loss of dissolved organic carbon (DOC is believed to play a key role in determining the carbon balance in peatlands. Zoige peatland, the largest peat store in China, is experiencing climatic warming and drying as well as experiencing severe artificial drainage. Using a fully crossed factorial design, we experimentally manipulated temperature and controlled the water tables in large mesocosms containing intact peat monoliths. Specifically, we determined the impact of warming and water table position on the hydrological loss of DOC, the exported amounts, concentrations and qualities of DOC, and the discharge volume in Zoige peatland. Our results revealed that of the water table position had a greater impact on DOC export than the warming treatment, which showed no interactive effects with the water table treatment. Both DOC concentration and discharge volume were significantly increased when water table drawdown, while only the DOC concentration was significantly promoted by warming treatment. Annual DOC export was increased by 69% and 102% when the water table, controlled at 0 cm, was experimentally lowered by -10 cm and -20 cm. Increases in colored and aromatic constituents of DOC (measured by Abs(254 nm, SUVA(254 nm, Abs(400 nm, and SUVA(400 nm were observed under the lower water tables and at the higher peat temperature. Our results provide an indication of the potential impacts of climatic change and anthropogenic drainage on the carbon cycle and/or water storage in a peatland and simultaneously imply the likelihood of potential damage to downstream ecosystems. Furthermore, our results highlight the need for local protection and sustainable development, as well as suggest that more research is required to better understand the impacts of climatic change and artificial disturbances on peatland degradation.

Inverse coupling of DOC and nitrate export from soils and streams

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Goodale, Christine

2013-04-01

Over the last two decades, nitrate concentrations in surface waters have decreased across the Northeastern United States and parts of northern Europe. Many hypotheses have been proposed to explain this decrease, but the cause remains unclear. One control may be associated with increasing abundance of dissolved organic carbon (DOC), which in turn may be a result of soil recovery from acidification. Compared across catchments, surface water NO3- decreases sharply with increasing DOC concentration. Here, we used measurements of soil and solution nitrate, DOC, and their isotopic composition (13C-DOC, 15N- and 18O-NO3) to test several related hypotheses that changing acidification affects the release of DOC and bio-available DOC (bDOC) from soil, and that variation in stocks of soil C and release of bDOC partly control NO3- export from forested catchments in New York State, USA. We examined whether DOC and NO3- are both driven by soil C processes that produce inverse coupling at the scale of soil cores as well as across catchments, through comparison of soil and surface water chemistry across nine catchments selected from long-term monitoring networks in the Catskill and Adirondack Mountains. In addition, we conducted a series of soil core leaching experiments to examine the role of acidification and recovery in driving the net production of DOC and NO3- from soils. Over 8 months, soil cores were leached biweekly with simulated rainfall solutions of varying pH (3.6 to 7.0) from additions of H2SO4, CaCO3 and NaOH. These experiments did not yield a pH-induced change in DOC quantity, but did show a change in DOC quality, in that acidified cores released more bio-available DOC with less depleted 13C-DOC than cores with experimentally increased pH. All cores leached substantial amounts of nitrate. Together, these lab- and field comparisons are being used to identify the role of soil production and consumption processes in driving cross-watershed differences in DOC and NO3

CDOM-DOC relationship in contrasted coastal waters : implication for DOC retrieval from ocean color remote sensing observation

OpenAIRE

Vantrepotte, V.; Danhiez, F. P.; Loisel, Hubert; Ouillon, Sylvain; Meriaux, X.; Cauvin, A.; Dessailly, D.

2015-01-01

Increasing our knowledge on dissolved organic carbon (DOC) spatio-temporal distribution in the coastal ocean represents a crucial challenge for better understanding the role of these ecosystems in the global oceanic carbon cycle. The assessment of DOC concentration from the absorption properties of the colored part of the dissolved organic matter (a(cdom)) was investigated from an extensive data set covering a variety of coastal environments. Our results confirmed that variation in the acdom(...

Effect of exposure to sunlight and phosphorus-limitation on bacterial degradation of coloured dissolved organic matter (CDOM) in freshwater.

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Kragh, Theis; Søndergaard, Morten; Tranvik, Lars

2008-05-01

This study reports on the interacting effect of photochemical conditioning of dissolved organic matter and inorganic phosphorus on the metabolic activity of bacteria in freshwater. Batch cultures with lake-water bacteria and dissolved organic carbon (DOC) extracted from a humic boreal river were arranged in an experimental matrix of three levels of exposure to simulated sunlight and three levels of phosphorus concentration. We measured an increase in bacterial biomass, a decrease in DOC and bacterial respiration as CO(2) production and O(2) consumption over 450 h. These measurements were used to calculate bacterial growth efficiency (BGE). Bacterial degradation of DOC increased with increasing exposure to simulated sunlight and availability of phosphorus and no detectable growth occurred on DOC that was not pre-exposed to simulated sunlight. The outcome of photochemical degradation of DOC changed with increasing availability of phosphorus, resulting in an increase in BGE from about 5% to 30%. Thus, the availability of phosphorus has major implications for the quantitative transfer of carbon in microbial food webs.

Prokaryotic degradation of high molecular weight dissolved organic matter in the deep-sea waters of NW Mediterranean Sea under in situ temperature and pressure conditions during contrasted hydrological conditions

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Tamburini, C.; Boutrif, M.; Garel, M.; Sempéré, R.; Repeta, D.; Charriere, B.; Nerini, D.; Panagiotopoulos, C.

2016-02-01

The contribution of the semi-labile dissolved organic carbon (DOC) to the global prokaryotic production has been assessed in very few previous studies. Some experiments show rapid utilization of semi-reactive DOC by prokaryotes, while other experiments show almost no utilization at all. However, all these studies did not take into account the role of hydrostatic pressure for the degradation of organic matter. In this study, we investigate (1) the degradation of "natural" high molecular weight DOM HMW-DOM (obtained after ultrafiltration) and (2) the uptake of labeled extracellular polymeric substances (3H-EPS) incubated with deep-sea water samples (2000 m-depth, NW Mediterranean Sea) under in situ pressure conditions (HP) and under atmospheric compression after decompression of the deep samples (ATM) during stratified and mixed water conditions (deep sea convection). Our results indicated that during HP incubations DOC exhibited the highest degradation rates (kHP DOC = 0.82 d-1) compared to the ATM conditions were no or few degradation was observed (kATM DOC= 0.007 d-1). An opposite trend was observed for the HP incubations from mixed deep water masses. HP incubation measurements displayed the lowest DOC degradation (kHP DOC=0.031 d-1) compared to the ATM conditions (kATM DOC=0.62 d-1). These results imply the presence of allochthonous prokaryotic cells in deep-sea samples after a winter water mass convection. Same trends were found using 3H-EPS uptake rates which were higher at HP than at ATM conditions during stratified period conditions whereas the opposite patterns were observed during deep-sea convection event. Moreover, we found than Euryarchaea were the main contributors to 3H-EPS assimilation at 2000m-depth, representing 58% of the total cells actively assimilating 3H-EPS. This study demonstrates that remineralization rates of semi-labile DOC in deep NW Med. Sea are controlled by the prokaryotic communities, which are influenced by the hydrological

Riverine CO2 supersaturation and outgassing in a subtropical monsoonal mountainous area (Three Gorges Reservoir Region) of China

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Li, Siyue; Ni, Maofei; Mao, Rong; Bush, Richard T.

2018-03-01

Rivers are an important source of CO2 to the atmosphere, however, mountainous rivers and streams with high emission rates are not well studied particularly in China. We report the first detailed investigation on monsoonal mountainous rivers in the Three Gorges Reservoir (TGR) region, with a focus on the riverine CO2 partial pressure (pCO2), CO2 degassing and their potential controls. The pCO2 levels ranged from 50 to 6019 μatm with averages of 1573 (SD. ±1060) in dry Autumn and 1276 (SD. ±1166) μatm in wet Summer seasons. 94% of samples were supersaturated with CO2 with respect to the atmospheric equilibrium (410 μatm). Monsoonal precipitation controlled pCO2 seasonality, with both the maximal and minimal levels occurring in the wet season, and showing the overall effects of dilution. Riverine pCO2 could be predicted better in the dry season using pH, DO% and DTP, whereas pH and DOC were better predictors in the wet season. We conclude that in-situ respiration of allochthonous organic carbon, rather than photosynthesis, resulted in negative relationships between pCO2 and DO and pH, and thus CO2 supersaturation. Photosynthetic primary production was effectively limited by rapid flow velocity and short residence time. The estimated water-to-air CO2 emission rate in the TGR rivers was 350 ± 319 in the Autumn and lower, yet more variable at 326 ± 439 mmol/m2/d in Summer. Our calculated CO2 areal fluxes were in the upper-level magnitude of published data, demonstrating the importance of mountainous rivers and streams as a global greenhouse gas source, and urgency for more detailed studies on CO2 degassing, to address a global data gap for these environments.

River use, conservation and management among riverine ...

African Journals Online (AJOL)

However the problem remains that many water resource planning and management regimes do not capture the views of the myriad of stakeholders and the many benefits of ecological services. This paper examines river use, conservation and management among riverine communities in South Eastern Nigeria using ...

Coastal and Riverine Flood Forecast Model powered by ADCIRC

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Khalid, A.; Ferreira, C.

2017-12-01

Coastal flooding is becoming a major threat to increased population in the coastal areas. To protect coastal communities from tropical storms & hurricane damages, early warning systems are being developed. These systems have the capability of real time flood forecasting to identify hazardous coastal areas and aid coastal communities in rescue operations. State of the art hydrodynamic models forced by atmospheric forcing have given modelers the ability to forecast storm surge, water levels and currents. This helps to identify the areas threatened by intense storms. Study on Chesapeake Bay area has gained national importance because of its combined riverine and coastal phenomenon, which leads to greater uncertainty in flood predictions. This study presents an automated flood forecast system developed by following Advanced Circulation (ADCIRC) Surge Guidance System (ASGS) guidelines and tailored to take in riverine and coastal boundary forcing, thus includes all the hydrodynamic processes to forecast total water in the Potomac River. As studies on tidal and riverine flow interaction are very scarce in number, our forecast system would be a scientific tool to examine such area and fill the gaps with precise prediction for Potomac River. Real-time observations from National Oceanic and Atmospheric Administration (NOAA) and field measurements have been used as model boundary feeding. The model performance has been validated by using major historical riverine and coastal flooding events. Hydrodynamic model ADCIRC produced promising predictions for flood inundation areas. As better forecasts can be achieved by using coupled models, this system is developed to take boundary conditions from Global WaveWatchIII for the research purposes. Wave and swell propagation will be fed through Global WavewatchIII model to take into account the effects of swells and currents. This automated forecast system is currently undergoing rigorous testing to include any missing parameters which

Microbial degradation of plant leachate alters lignin phenols and trihalomethane precursors

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Pellerin, Brian A.; Hernes, Peter J.; Saraceno, John Franco; Spencer, Robert G.M.; Bergamaschi, Brian A.

2010-01-01

Although the importance of vascular plant-derived dissolved organic carbon (DOC) in freshwater systems has been studied, the role of leached DOC as precursors of disinfection byproducts (DBPs) during drinking water treatment is not well known. Here we measured the propensity of leachates from four crops and four aquatic macrophytes to form trihalomethanes (THMs)—a regulated class of DBPs—before and after 21 d of microbial degradation. We also measured lignin phenol content and specific UV absorbance (SUVA254) to test the assumption that aromatic compounds from vascular plants are resistant to microbial degradation and readily form DBPs. Leaching solubilized 9 to 26% of total plant carbon, which formed 1.93 to 6.72 mmol THM mol C-1 However, leachate DOC concentrations decreased by 85 to 92% over the 21-d incubation, with a concomitant decrease of 67 to 92% in total THM formation potential. Carbon-normalized THM yields in the residual DOC pool increased by 2.5 times on average, consistent with the preferential uptake of nonprecursor material. Lignin phenol concentrations decreased by 64 to 96% over 21 d, but a lack of correlation between lignin content and THM yields or SUVA254 suggested that lignin-derived compounds are not the source of increased THM precursor yields in the residual DOC pool. Our results indicate that microbial carbon utilization alters THM precursors in ecosystems with direct plant leaching, but more work is needed to identify the specific dissolved organic matter components with a greater propensity to form DBPs and affect watershed management, drinking water quality, and human health.

Dynamics of dissolved organic carbon in a stream during a quarter century of forest succession

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Judy L. Meyer; Jackson Webster; Jennifer Knoepp; E.F. Benfield

2014-01-01

Dissolved organic carbon (DOC) is a heterogeneous mixture of compounds that makes up a large fraction of the organic matter transported in streams. It plays a significant role in many ecosystems. Riverine DOC links organic carbon cycles of continental and oceanic ecosystems. It is a significant trophic resource in stream food webs. DOC imparts color to lakes,...

Doc toxin is a kinase that inactivates elongation factor Tu.

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Cruz, Jonathan W; Rothenbacher, Francesca P; Maehigashi, Tatsuya; Lane, William S; Dunham, Christine M; Woychik, Nancy A

2014-03-14

The Doc toxin from bacteriophage P1 (of the phd-doc toxin-antitoxin system) has served as a model for the family of Doc toxins, many of which are harbored in the genomes of pathogens. We have shown previously that the mode of action of this toxin is distinct from the majority derived from toxin-antitoxin systems: it does not cleave RNA; in fact P1 Doc expression leads to mRNA stabilization. However, the molecular triggers that lead to translation arrest are not understood. The presence of a Fic domain, albeit slightly altered in length and at the catalytic site, provided a clue to the mechanism of P1 Doc action, as most proteins with this conserved domain inactivate GTPases through addition of an adenylyl group (also referred to as AMPylation). We demonstrated that P1 Doc added a single phosphate group to the essential translation elongation factor and GTPase, elongation factor (EF)-Tu. The phosphorylation site was at a highly conserved threonine, Thr-382, which was blocked when EF-Tu was treated with the antibiotic kirromycin. Therefore, we have established that Fic domain proteins can function as kinases. This distinct enzymatic activity exhibited by P1 Doc also solves the mystery of the degenerate Fic motif unique to the Doc family of toxins. Moreover, we have established that all characterized Fic domain proteins, even those that phosphorylate, target pivotal GTPases for inactivation through a post-translational modification at a single functionally critical acceptor site.

Isotope-geochemical studies on fractions of dissolved organic carbon (DOC) for determining the origin and evolution of DOC for purposes of groundwater dating

International Nuclear Information System (INIS)

Geyer, S.

1994-01-01

The laboratory work consisted in developing and testing methods of extraction and enrichment of individual high-purity DOC fractions (fulvic acids, humic acids, and low-molecular substances) with the aim of preparing large quantities of groundwaters (> 1000 l) with low DOC concentrations so as to obtain sufficient sampling material. Chemical characterisation of DOC consisted in an analysis of humic and fulvic acids with regard to element composition (C, H, N, O, S) and inorganic trace elements. Isotopic characterization of the DOC fractions consisted in determining 14 C, 13 C, and 2 H levels. For the first time δ 34 S and δ 15 N relations in humic and fulvic acids dissolved in groundwater were determined. (orig./DG) [de

Quantifying the impact of riverine particulate dissolution in seawater on ocean chemistry

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Jones, Morgan T.; Gislason, Sigurður R.; Burton, Kevin W.; Pearce, Christopher R.; Mavromatis, Vasileios; Pogge von Strandmann, Philip A. E.; Oelkers, Eric H.

2014-06-01

The quantification of the sources and sinks of elements to the oceans forms the basis of our understanding of global geochemical cycles and the chemical evolution of the Earth's surface. There is, however, a large imbalance in the current best estimates of the global fluxes to the oceans for many elements. In the case of strontium (Sr), balancing the input from rivers would require a much greater mantle-derived component than is possible from hydrothermal water flux estimates at mid-ocean ridges. Current estimates of riverine fluxes are based entirely on measurements of dissolved metal concentrations, and neglect the impact of riverine particulate dissolution in seawater. Here we present 87Sr/86Sr isotope data from an Icelandic estuary, which demonstrate rapid Sr release from the riverine particulates. We calculate that this Sr release is 1.1-7.5 times greater than the corresponding dissolved riverine flux. If such behaviour is typical of volcanic particulates worldwide, this release could account for 6-45% of the perceived marine Sr budget imbalance, with continued element release over longer timescales further reducing the deficit. Similar release from particulate material will greatly affect the marine budgets of many other elements, changing our understanding of coastal productivity, and anthropogenic effects such as soil erosion and the damming of rivers.

Google Docs in an Out-of-Class Collaborative Writing Activity

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Zhou, Wenyi; Simpson, Elizabeth; Domizi, Denise Pinette

2012-01-01

Google Docs, an online word processing application, is a promising tool for collaborative learning. However, many college instructors and students lack knowledge to effectively use Google Docs to enhance teaching and learning. Goals of this study include (1) assessing the effectiveness of using Google Docs in an out-of-class collaborative writing…

Removal of terrestrial DOC in aquatic ecosystems of a temperate river network

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Wollheim, W.M.; Stewart, R. J.; Aiken, George R.; Butler, Kenna D.; Morse, Nathaniel B.; Salisbury, J.

2015-01-01

Surface waters play a potentially important role in the global carbon balance. Dissolved organic carbon (DOC) fluxes are a major transfer of terrestrial carbon to river systems, and the fate of DOC in aquatic systems is poorly constrained. We used a unique combination of spatially distributed sampling of three DOC fractions throughout a river network and modeling to quantify the net removal of terrestrial DOC during a summer base flow period. We found that aquatic reactivity of terrestrial DOC leading to net loss is low, closer to conservative chloride than to reactive nitrogen. Net removal occurred mainly from the hydrophobic organic acid fraction, while hydrophilic and transphilic acids showed no net change, indicating that partitioning of bulk DOC into different fractions is critical for understanding terrestrial DOC removal. These findings suggest that river systems may have only a modest ability to alter the amounts of terrestrial DOC delivered to coastal zones.

Assessing the relative bioavailability of DOC in regional groundwater systems

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Chapelle, Francis H.; Bradley, Paul M.; Journey, Celeste A.; McMahon, Peter B.

2013-01-01

It has been hypothesized that the degree to which a hyperbolic relationship exists between concentrations of dissolved organic carbon (DOC) and dissolved oxygen (DO) in groundwater may indicate the relative bioavailability of DOC. This hypothesis was examined for 73 different regional aquifers of the United States using 7745 analyses of groundwater compiled by the National Water Assessment (NAWQA) program of the U.S. Geological Survey. The relative reaction quotient (RRQ), a measure of the curvature of DOC concentrations plotted versus DO concentrations and regressed to a decaying hyperbolic equation, was used to assess the relative bioavailability of DOC. For the basalt aquifer of Oahu, Hawaii, RRQ values were low (0.0013 mM−2), reflecting a nearly random relationship between DOC and DO concentrations. In contrast, on the island of Maui, treated sewage effluent injected into a portion of the basalt aquifer resulted in pronounced hyperbolic DOC-DO behavior and a higher RRQ (142 mM−2). RRQ values for the 73 aquifers correlated positively with mean concentrations of ammonia, dissolved iron, and manganese, and correlated negatively with mean pH. This indicates that greater RRQ values are associated with greater concentrations of the final products of microbial reduction reactions. RRQ values and DOC concentrations were negatively correlated with the thickness of the unsaturated zone (UNST) and depth to the top of the screened interval. Finally, RRQ values were positively correlated with mean annual precipitation (MAP), and the highest observed RRQ values were associated with aquifers receiving MAP rates ranging between 900 and 1300 mm/year. These results are uniformly consistent with the hypothesis that the hyperbolic behavior of DOC-DO plots, as quantified by the RRQ metric, can be an indicator of relative DOC bioavailability in groundwater systems.

Assessing the relative bioavailability of DOC in regional groundwater systems.

Science.gov (United States)

Chapelle, Francis H; Bradley, Paul M; Journey, Celeste A; McMahon, Peter B

2013-01-01

It has been hypothesized that the degree to which a hyperbolic relationship exists between concentrations of dissolved organic carbon (DOC) and dissolved oxygen (DO) in groundwater may indicate the relative bioavailability of DOC. This hypothesis was examined for 73 different regional aquifers of the United States using 7745 analyses of groundwater compiled by the National Water Assessment (NAWQA) program of the U.S. Geological Survey. The relative reaction quotient (RRQ), a measure of the curvature of DOC concentrations plotted versus DO concentrations and regressed to a decaying hyperbolic equation, was used to assess the relative bioavailability of DOC. For the basalt aquifer of Oahu, Hawaii, RRQ values were low (0.0013 mM(-2)), reflecting a nearly random relationship between DOC and DO concentrations. In contrast, on the island of Maui, treated sewage effluent injected into a portion of the basalt aquifer resulted in pronounced hyperbolic DOC-DO behavior and a higher RRQ (142 mM(-2)). RRQ values for the 73 aquifers correlated positively with mean concentrations of ammonia, dissolved iron, and manganese, and correlated negatively with mean pH. This indicates that greater RRQ values are associated with greater concentrations of the final products of microbial reduction reactions. RRQ values and DOC concentrations were negatively correlated with the thickness of the unsaturated zone (UNST) and depth to the top of the screened interval. Finally, RRQ values were positively correlated with mean annual precipitation (MAP), and the highest observed RRQ values were associated with aquifers receiving MAP rates ranging between 900 and 1300 mm/year. These results are uniformly consistent with the hypothesis that the hyperbolic behavior of DOC-DO plots, as quantified by the RRQ metric, can be an indicator of relative DOC bioavailability in groundwater systems. Published 2012. This article is a U.S. Government work and is in the public domain in the USA.

Integrated use of SRS Data &GIS Technique for Monitoring Changes in Riverine Forest of Sindh, Pakistan

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Siddiqui, M.; Ali, Z.

Deforestation / depletion in forest area threaten the sustainability of agricultural production systems and en-danger the economy of the country. Every year extensive areas of arable agricultural and forestlands are degraded and turned into wastelands, due to natural causes or human interventions. There are several causes of deforestation, such as expansion in agricultural area, urban development, forest fires, commercial logging, illicit cutting, grazing, constructions of dams / reservoirs and barrages, com munication links, etc. Depletion in forest cover, therefore, has an important impact on socio - economic development and ecological balance. High population growth rate in Pakistan is one of the main causes for the rapid deterioration of physical environment and natural resource base. In view of this, it is felt necessary to carryout land -u s e studies focusing on strategies for mapping the past and present conditions and extent of forests and rangelands using Satellite Remote Sensing (SRS) data and GIS t echnology. The SRS and GIS technology provides a possible means of monitoring and mapping changes occurring in natural resources and the environment on a continuing basis. The riverine forests of Sindh mostly grow along the River Indus in the flood plains, spread over an area of 241,000 ha are disappearing very rapidly. Construction of dams / barrages on the upper reaches of the River Indus for hydroelectric power and irrigation works have significantly reduced the discharge of fresh water into the lower Indus basin and as a result, 100,000 acres of forests have disappeared. Furthermore, the heavy floods that occurred in 1978, 1988, 1992 and 1997, altered the course of the River Indus in many places, especially in the lower reaches, this has also damaged the riverine forests of Sindh. An integrated approach involving analysis of SRS data from 1977 to 1998 and GIS technique have been used to evaluate the geographic ex-tent and distribution of the riverine

Bacterial growth and DOC consumption in a tropical coastal lagoon

Directory of Open Access Journals (Sweden)

V. F. Farjalla

Full Text Available The aims of this research were to determine the main limiting nutrient to bacterial growth in Imboassica lagoon, southeastern Brazil, to estimate the percentage of dissolved organic carbon (DOC available for bacterial growth, and to determine the bacterial growth efficiency (BGE of natural assemblages. Bacterial growth and DOC consumption were determined in batch culture experiments, in which water samples were supplemented with nitrogen and phosphorus together or separately, or incubated without nutrient additions. When added together, N and P stimulated higher bacterial growth rates and production, as well as higher DOC consumption. The BGEs and DOC consumption rates were strongly dependent on the method used to determine bacterial production. The BGE ranged from 11 to 72%. However, only a minor fraction of bulk DOC was consumed by the planktonic bacteria (from 0.7 to 3.4%. The results suggest that low availability of phosphorus and nitrogen coupled with excess organic carbon was the main factor responsible for the relatively low bacterial utilization of DOC in Imboassica lagoon.

Removal of Chromophoric Dissolved Organic Matter and Heavy Metals in a River-Sea System: Role of Aquatic Microgel Formation

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Shiu, R. F.; Lee, C. L.

2016-12-01

Dissolved organic carbon (DOC) polymers are complex and poorly understood mixture of organic macromolecules in environment system. Portions of these polymers spontaneously form microgels that play key roles in many biogeochemical reactions, including mediating aggregation processes, element cycling, and pollutant mobility. However, the detailed interaction of microgels-heterogeneous materials in aquatic systems is still lacking. Insight into the interaction between surrounding materials and microgels from different types of aquatic DOC polymers are extremely important, as it is crucial in determining the fate and transport of these materials. Here, we use riverine and marine DOC polymers to examine their aggregation behavior, and to evaluate the roles of microgel formation in scavenging of chromophoric dissolved organic matter (CDOM) and heavy metals in a river-sea system. Our results indicate that riverine and marine microgels did not exhibit too much difference in size ( 3-5 μm) and self-assembly curve; however, the assembly effectiveness ([microgel]/DOC) of marine samples was much higher than riverine. Instead of concentration of DOC, other factors such as types and sources of DOC polymers may control the microgel abundance in aquatic environments. After filtering water samples (microgels removed), the CDOM and selected metals (Cu, Ni, Mn) in the filtrate were quantified. CDOM and metals were concurrently removed to an extent via DOC polymer re-aggregation, which also suggested that the microgels had the sequestering capability in CDOM and metals. This finding provides an alternative route for CDOM and heavy metals removal from the water column. As such the process of re-aggregation into microgels should then be considered besides traditional phase partitioning in the assessment of the ecological risk and fate of pollutant.

Dynamics, chemical properties and bioavailability of DOC in an early successional catchment

Directory of Open Access Journals (Sweden)

U. Risse-Buhl

2013-07-01

Full Text Available The dynamics of dissolved organic carbon (DOC have been intensively studied in mature ecosystems, but little is known about DOC dynamics and the significance of DOC as a substrate for microbial activity in early-successional catchments. We determined the concentration, chemical composition, source, radiocarbon age, and bioavailability of DOC along the hydrological flow path from soil solution to a downstream pond in a recently constructed catchment (Chicken Creek Catchment, Germany. Soil solution, upwelling ground water, stream water, subsurface water in an alluvial fan, and pond water all had high DOC concentrations (averages: 6.0–11.6 mg DOC L–1, despite small carbon stocks in both vegetation and soil of the catchment. Solid-state CPMAS 13C NMR of DOC in upwelling ground water revealed a higher proportion of aromatic compounds (32% and a lower proportion of carbohydrates (33% than in pond water (18% and 45%, respectively. The average 14C age of DOC in upwelling ground water was 2600 to 2900 yr, while organic matter of the Quaternary substrate of the catchment had a 14C age of 3000 to 16 000 yr. Both the 14C age data and 13C NMR spectra suggest that DOC partly derived from organic matter of the Quaternary substrate (about 40 to 90% of the C in the DOC, indicating that both recent and old C of the DOC can support microbial activity during early ecosystem succession. However, in a 70 day incubation experiment, only about 11% of the total DOC was found to be bioavailable. This proportion was irrespective of the water type. Origin of the microbial communities within the catchment (enriched from soil, stream sediment or pond water also had only a marginal effect on overall DOC utilization.

[Effect of the Runoff-sediment Control of the Xiaolangdi Reservoir on DOC Transport].

Science.gov (United States)

Zhang, Yong-ling; Wang, Ming-shi; Dong, Yu-long

2015-04-01

The sampling was carried out in Sanmenxia hydrological station, Xiaolangdi hydrological station and Huayuankou hydrological station from November 2011 to October 2012. The impact of the runoff-sediment control of the Xiaolangdi reservoir on DOC transport,was analyzed. The results were as follows. DOC contents in Sanmenxia station, Xiaolangdi station and Huayuankou station were 1.97-2.71 mg-L(-1), 1.87-2.76 mg x L(-1) and 2.07-2.93 mg x L(-1), respectively, during the normal operation period of Xiaolangdi Reservoir and Sanmenxia reservoir, and the DOC content in the three reservoirs had obvious seasonal change. DOC contents in the three stations were 2.14-3.32 mg x L(-1), 2.21-2.84 mg x L(-1) and 2.11-2.84 mg x L(-1), respectively, during the runoff-sediment control, and the DOC content in the sediment-releasing period of reservoir was higher than that in the water-releasing period of reservoir. DOC content had no significant correlation with TSS and flow either during the normal operation or during the water-sediment regulation of the reservoir. But the DOC content had significant correlation with water temperature during the normal operation of the reservoir. DOC flux in Sanmenxia station was similar to that in Xiaolangdi station from November to March. DOC flux in Sanmenxia station was obviously less than that in Xiaolangdi station from April to July. And the DOC flux in Sanmenxia station was much higher than that in Xiaolangdi station from August to October. The result showed that DOC was retained from August to October by Xiaolangdi reservoir and discharged from Xiaolangdi reservoir from April to July. The yearly DOC fluxes were 8.6 x 10(10), 9.0 x 10(10) and 9.7 x 10(10) g respectively in Sanmenxia station, Xiaolangdi station and Huayuankou station. The DOC flux of Sanmenxia station was the highest in September, which accounted for 22.0% of the yearly DOC flux, and the DOC flux of Xiaolangdi station was the highest in June, which accounted for 17.6% of the

Doc Toxin Is a Kinase That Inactivates Elongation Factor Tu*

Science.gov (United States)

Cruz, Jonathan W.; Rothenbacher, Francesca P.; Maehigashi, Tatsuya; Lane, William S.; Dunham, Christine M.; Woychik, Nancy A.

2014-01-01

The Doc toxin from bacteriophage P1 (of the phd-doc toxin-antitoxin system) has served as a model for the family of Doc toxins, many of which are harbored in the genomes of pathogens. We have shown previously that the mode of action of this toxin is distinct from the majority derived from toxin-antitoxin systems: it does not cleave RNA; in fact P1 Doc expression leads to mRNA stabilization. However, the molecular triggers that lead to translation arrest are not understood. The presence of a Fic domain, albeit slightly altered in length and at the catalytic site, provided a clue to the mechanism of P1 Doc action, as most proteins with this conserved domain inactivate GTPases through addition of an adenylyl group (also referred to as AMPylation). We demonstrated that P1 Doc added a single phosphate group to the essential translation elongation factor and GTPase, elongation factor (EF)-Tu. The phosphorylation site was at a highly conserved threonine, Thr-382, which was blocked when EF-Tu was treated with the antibiotic kirromycin. Therefore, we have established that Fic domain proteins can function as kinases. This distinct enzymatic activity exhibited by P1 Doc also solves the mystery of the degenerate Fic motif unique to the Doc family of toxins. Moreover, we have established that all characterized Fic domain proteins, even those that phosphorylate, target pivotal GTPases for inactivation through a post-translational modification at a single functionally critical acceptor site. PMID:24448800

Trends in soil solution dissolved organic carbon (DOC) concentrations across European forests

NARCIS (Netherlands)

Camino-Serrano, Marta; Graf Pannatier, Elisabeth; Vicca, Sara; Luyssaert, Sebastiaan; Jonard, Mathieu; Ciais, Philippe; Guenet, Bertrand; Gielen, Bert; Peñuelas, Josep; Sardans, Jordi; Waldner, Peter; Sawicka, Kasia

2016-01-01

Dissolved organic carbon (DOC) in surface waters is connected to DOC in soil solution through hydrological pathways. Therefore, it is expected that long-term dynamics of DOC in surface waters reflect DOC trends in soil solution. However, a multitude of site studies have failed so far to establish

Trends in soil solution dissolved organic carbon (DOC) concentrations across European forests

NARCIS (Netherlands)

Camino-Serrano, M.; Graf Pannatier, E.; Vicca, S.; Luyssaert, S.; Jonard, M.; Ciais, P.; Guenet, B.; Gielen, B.; Peñuelas, J.; Sardans, J.; Waldner, P.; Etzold, S.; Cecchini, G.; Clarke, N.; Galić, Z.; Gandois, L.; Hansen, K.; Johnson, J.; Klinck, U.; Lachmanová, Z.; Lindroos, A.J.; Meesenburg, H.; Nieminen, T.M.; Sanders, T.G.M.; Sawicka, K.; Seidling, W.; Thimonier, A.; Vanguelova, E.; Verstraeten, A.; Vesterdal, L.; Janssens, I.A.

2016-01-01

Dissolved organic carbon (DOC) in surface waters is connected to DOC in soil solution through hydrological pathways. Therefore, it is expected that long-term dynamics of DOC in surface waters reflect DOC trends in soil solution. However, a multitude of site studies have failed so far to establish

Polychlorinated naphthalenes (PCNs) in riverine and marine sediments of the Laizhou Bay area, North China

International Nuclear Information System (INIS)

Pan Xiaohui; Tang Jianhui; Chen Yingjun; Li Jun; Zhang Gan

2011-01-01

PCN congeners were analyzed in marine and riverine sediments of the Laizhou Bay area, North China. Concentrations of PCNs ranged from 0.12 to 5.1 ng g -1 dry weight (dw) with a mean value of 1.1 ng g -1 dw. The levels of PCNs varied largely, with industrial group approximately ten folds higher than those of the rural in riverine sediment. A strong impact by direct discharge from local factories was suggested. Similar compositional profiles were found within groups. High resemblance of compositional profiles between industrial samples and Halowax 1014 was observed. It was indicated that PCNs in riverine sediments were mainly from release of industrial usage, with additional contributions from industrial thermal process at certain sites. In marine sediments, it was suggested that PCNs along the coast of Laizhou Bay were mainly controlled by riverine input. While in the central bay, PCN distributions were possibly impacted by combined multiple factors. - Highlights: → We investigated the PCN levels both in the riverine and marine surface sediments of Laizhou Bay. → PCN concentrations in the river sediments of industrial group were ten times higher than in the rural group. → Leakage from industrial materials and thermal processes were the major sources. → PCNs in the coastal sites were more influenced by the river discharge. → In the centre bay, PCN distributions were possibly impacted by combined multiple factors. - A systematic sampling of riverine and marine sediments was conducted in Laizhou Bay area to investigate the distribution and possible sources of PCNs.

Latitudinal gradients in degradation of marine dissolved organic carbon

DEFF Research Database (Denmark)

Arnosti, Carol; Steen, Andrew; Ziervogel, Kai

2011-01-01

unknown, since the vast majority of marine bacteria have not been isolated in culture, and most measurements of DOC degradation rates have focused on uptake and metabolism of either bulk DOC or of simple model compounds (e.g. specific amino acids or sugars). Genomic investigations provide information......Heterotrophic microbial communities cycle nearly half of net primary productivity in the ocean, and play a particularly important role in transformations of dissolved organic carbon (DOC). The specific means by which these communities mediate the transformations of organic carbon are largely...... about the potential capabilities of organisms and communities but not the extent to which such potential is expressed. We tested directly the capabilities of heterotrophic microbial communities in surface ocean waters at 32 stations spanning latitudes from 76 ºS to 79 ºN to hydrolyze a range of high...

Riverine Landscape Patch Heterogeneity Drives Riparian Ant Assemblages in the Scioto River Basin, USA.

Directory of Open Access Journals (Sweden)

Paradzayi Tagwireyi

Full Text Available Although the principles of landscape ecology are increasingly extended to include riverine landscapes, explicit applications are few. We investigated associations between patch heterogeneity and riparian ant assemblages at 12 riverine landscapes of the Scioto River, Ohio, USA, that represent urban/developed, agricultural, and mixed (primarily forested, but also wetland, grassland/fallow, and exurban land-use settings. Using remotely-sensed and ground-collected data, we delineated riverine landscape patch types (crop, grass/herbaceous, gravel, lawn, mudflat, open water, shrub, swamp, and woody vegetation, computed patch metrics (area, density, edge, richness, and shape, and conducted coordinated sampling of surface-active Formicidae assemblages. Ant density and species richness was lower in agricultural riverine landscapes than at mixed or developed reaches (measured using S [total number of species], but not using Menhinick's Index [DM], whereas ant diversity (using the Berger-Park Index [DBP] was highest in agricultural reaches. We found no differences in ant density, richness, or diversity among internal riverine landscape patches. However, certain characteristics of patches influenced ant communities. Patch shape and density were significant predictors of richness (S: R2 = 0.72; DM: R2=0.57. Patch area, edge, and shape emerged as important predictors of DBP (R2 = 0.62 whereas patch area, edge, and density were strongly related to ant density (R2 = 0.65. Non-metric multidimensional scaling and analysis of similarities distinguished ant assemblage composition in grass and swamp patches from crop, gravel, lawn, and shrub as well as ant assemblages in woody vegetation patches from crop, lawn, and gravel (stress = 0.18, R2 = 0.64. These findings lend insight into the utility of landscape ecology to river science by providing evidence that spatial habitat patterns within riverine landscapes can influence assemblage characteristics of riparian

Enhanced DOC removal using anion and cation ion exchange resins.

Science.gov (United States)

Arias-Paic, Miguel; Cawley, Kaelin M; Byg, Steve; Rosario-Ortiz, Fernando L

2016-01-01

Hardness and DOC removal in a single ion exchange unit operation allows for less infrastructure, is advantageous for process operation and depending on the water source, could enhance anion exchange resin removal of dissolved organic carbon (DOC). Simultaneous application of cationic (Plus) and anionic (MIEX) ion exchange resin in a single contact vessel was tested at pilot and bench scales, under multiple regeneration cycles. Hardness removal correlated with theoretical predictions; where measured hardness was between 88 and 98% of the predicted value. Comparing bench scale DOC removal of solely treating water with MIEX compared to Plus and MIEX treated water showed an enhanced DOC removal, where removal was increased from 0.5 to 1.25 mg/L for the simultaneous resin application compared to solely applying MIEX resin. A full scale MIEX treatment plant (14.5 MGD) reduced raw water DOC from 13.7 mg/L to 4.90 mg/L in the treated effluent at a bed volume (BV) treatment rate of 800, where a parallel operation of a simultaneous MIEX and Plus resin pilot (10 gpm) measured effluent DOC concentrations of no greater than 3.4 mg/L, even at bed volumes of treatment 37.5% greater than the full scale plant. MIEX effluent compared to simultaneous Plus and MIEX effluent resulted in differences in fluorescence intensity that correlated to decreases in DOC concentration. The simultaneous treatment of Plus and MIEX resin produced water with predominantly microbial character, indicating the enhanced DOC removal was principally due to increased removal of terrestrially derived organic matter. The addition of Plus resin to a process train with MIEX resin allows for one treatment process to remove both DOC and hardness, where a single brine waste stream can be sent to sewer at a full-scale plant, completely removing lime chemical addition and sludge waste disposal for precipitative softening processes. Published by Elsevier Ltd.

Modelling impacts of temperature, and acidifying and eutrophying deposition on DOC trends

Science.gov (United States)

Sawicka, Kasia; Rowe, Ed; Evans, Chris; Monteith, Don; Vanguelova, Elena; Wade, Andrew; Clark, Joanna

2017-04-01

Surface water dissolved organic carbon (DOC) concentrations in large parts of the northern hemisphere have risen over the past three decades, raising concern about enhanced contributions of carbon to the atmosphere and seas and oceans. The effect of declining acid deposition has been identified as a key control on DOC trends in soil and surface waters, since pH and ionic strength affect sorption and desorption of DOC. However, since DOC is derived mainly from recently-fixed carbon, and organic matter decomposition rates are considered sensitive to temperature, uncertainty persists regarding the extent to the relative importance of different drivers that affect these upward trends. We ran the dynamic model MADOC (Model of Acidity and Soil Organic Carbon) for a range of UK soils (podzols, gleysols and peatland), for which the time-series were available, to consider the likely relative importance of decreased deposition of sulphate and chloride, accumulation of reactive N, and higher temperatures, on DOC production in different soils. Modelled patterns of DOC change generally agreed favourably with measurements collated over 10-20 years, but differed markedly between sites. While the acidifying effect of sulphur deposition appeared to be the predominant control on the observed soil water DOC trends in all the soils considered other than a blanket peat, the model suggested that over the long term, the effects of nitrogen deposition on N-limited soils may have been sufficient to elevate the DOC recovery trajectory significantly. The second most influential cause of rising DOC in the model simulations was N deposition in ecosystems that are N-limited and respond with stimulated plant growth. Although non-marine chloride deposition made some contribution to acidification and recovery, it was not amongst the main drivers of DOC change. Warming had almost no effect on modelled historic DOC trends, but may prove to be a significant driver of DOC in future via its influence

Influence of lag effect, soil release, and climate change on watershed anthropogenic nitrogen inputs and riverine export dynamics.

Science.gov (United States)

Chen, Dingjiang; Huang, Hong; Hu, Minpeng; Dahlgren, Randy A

2014-05-20

This study demonstrates the importance of the nitrogen-leaching lag effect, soil nitrogen release, and climate change on anthropogenic N inputs (NANI) and riverine total nitrogen (TN) export dynamics using a 30-yr record for the Yongan River watershed in eastern China. Cross-correlation analysis indicated a 7-yr, 5-yr, and 4-yr lag time in riverine TN export in response to changes in NANI, temperature, and drained agricultural land area, respectively. Enhanced by warmer temperature and improved agricultural drainage, the upper 20 cm of agricultural soils released 270 kg N ha(-1) between 1980 and 2009. Climate change also increased the fractional export of NANI to river. An empirical model (R(2) = 0.96) for annual riverine TN flux incorporating these influencing factors estimated 35%, 41%, and 24% of riverine TN flux originated from the soil N pool, NANI, and background N sources, respectively. The model forecasted an increase of 45%, 25%, and 6% and a decrease of 13% in riverine TN flux from 2010 to 2030 under continued development, climate change, status-quo, and tackling scenarios, respectively. The lag effect, soil N release, and climate change delay riverine TN export reductions with respect to decreases in NANI and should be considered in developing and evaluating N management measures.

48 CFR 1323.404-70 - DOC affirmative procurement program.

Science.gov (United States)

2010-10-01

... 48 Federal Acquisition Regulations System 5 2010-10-01 2010-10-01 false DOC affirmative procurement program. 1323.404-70 Section 1323.404-70 Federal Acquisition Regulations System DEPARTMENT OF..., OCCUPATIONAL SAFETY, AND DRUG-FREE WORKPLACE Use of Recovered Materials 1323.404-70 DOC affirmative procurement...

Reliability and Validity of the Dyadic Observed Communication Scale (DOCS).

Science.gov (United States)

Hadley, Wendy; Stewart, Angela; Hunter, Heather L; Affleck, Katelyn; Donenberg, Geri; Diclemente, Ralph; Brown, Larry K

2013-02-01

We evaluated the reliability and validity of the Dyadic Observed Communication Scale (DOCS) coding scheme, which was developed to capture a range of communication components between parents and adolescents. Adolescents and their caregivers were recruited from mental health facilities for participation in a large, multi-site family-based HIV prevention intervention study. Seventy-one dyads were randomly selected from the larger study sample and coded using the DOCS at baseline. Preliminary validity and reliability of the DOCS was examined using various methods, such as comparing results to self-report measures and examining interrater reliability. Results suggest that the DOCS is a reliable and valid measure of observed communication among parent-adolescent dyads that captures both verbal and nonverbal communication behaviors that are typical intervention targets. The DOCS is a viable coding scheme for use by researchers and clinicians examining parent-adolescent communication. Coders can be trained to reliably capture individual and dyadic components of communication for parents and adolescents and this complex information can be obtained relatively quickly.

Automatisierte Artikelbestellverwaltung: Doctor-Doc – ein bibliothekarisches Verwaltungswerkzeug / Automation in Interlibrary Loan: Doctor-Doc – a tool for librarians

Directory of Open Access Journals (Sweden)

Fischer, Markus

2010-05-01

Full Text Available Interlibrary loan has always been an important service to supplement own library holdings.To organize and standardize the order process of journal articles for 6 hospitals, we did create an online tool for the Solothurner Spitäler AG. The resulting application is available for libraries free of charge under http://www.doctor-doc.com/. The application is maintained and will be further developed by an association founded specially for this purpose. Doctor-Doc is not a supplier of articles, but rather a platform to organize orders at existing suppliers like Subito, British Library or any other supplying libraries. Doctor-Doc is OpenURL compliant and is able to resolve identifiers like PMIDs. In combination with an existing account from the german EZB, libraries can use the application as a linkresolver.The application has become an essential tool to efficiently manage interlibrary loan for the Solothurner Spitäler AG. The tool is also used by many libraries in Germany and Switzerland.

DOC concentrations across a depth-dependent light gradient on a Caribbean coral reef

Directory of Open Access Journals (Sweden)

Benjamin Mueller

2017-06-01

Full Text Available Photosynthates released by benthic primary producers (BPP, such as reef algae and scleractinian corals, fuel the dissolved organic carbon (DOC production on tropical coral reefs. DOC concentrations near BPP have repeatedly been observed to be elevated compared to those in the surrounding water column. As the DOC release of BPP increases with increasing light availability, elevated DOC concentrations near them will, in part, also depend on light availability. Consequently, DOC concentrations are likely to be higher on the shallow, well-lit reef terrace than in deeper sections on the fore reef slope. We measured in situ DOC concentrations and light intensity in close proximity to the reef alga Dictyota sp. and the scleractinian coral Orbicella faveolata along a depth-dependent light gradient from 5 to 20 m depth and compared these to background concentrations in the water column. At 10 m (intermediate light, DOC concentrations near Dictyota sp. were elevated by 15 µmol C L−1 compared to background concentrations in the water column, but not at 5 and 20 m (high and low light, respectively, or near O. faveolata at any of the tested depths. DOC concentrations did not differ between depths and thereby light environments for any of the tested water types. However, water type and depth appear to jointly affect in situ DOC concentrations across the tested depth-dependent light gradient. Corroborative ex situ measurements of excitation pressure on photosystem II suggest that photoinhibition in Dictyota sp. is likely to occur at light intensities that are commonly present on Curaçaoan coral reefs under high light levels at 5 m depth during midday. Photoinhibition may have thereby reduced the DOC release of Dictyota sp. and DOC concentrations in its close proximity. Our results indicate that the occurrence of elevated DOC concentrations did not follow a natural light gradient across depth. Instead, a combination of multiple factors, such as water type

DOC concentrations across a depth-dependent light gradient on a Caribbean coral reef.

Science.gov (United States)

Mueller, Benjamin; Meesters, Erik H; van Duyl, Fleur C

2017-01-01

Photosynthates released by benthic primary producers (BPP), such as reef algae and scleractinian corals, fuel the dissolved organic carbon (DOC) production on tropical coral reefs. DOC concentrations near BPP have repeatedly been observed to be elevated compared to those in the surrounding water column. As the DOC release of BPP increases with increasing light availability, elevated DOC concentrations near them will, in part, also depend on light availability. Consequently, DOC concentrations are likely to be higher on the shallow, well-lit reef terrace than in deeper sections on the fore reef slope. We measured in situ DOC concentrations and light intensity in close proximity to the reef alga Dictyota sp. and the scleractinian coral Orbicella faveolata along a depth-dependent light gradient from 5 to 20 m depth and compared these to background concentrations in the water column. At 10 m (intermediate light), DOC concentrations near Dictyota sp. were elevated by 15 µmol C L -1 compared to background concentrations in the water column, but not at 5 and 20 m (high and low light, respectively), or near O. faveolata at any of the tested depths. DOC concentrations did not differ between depths and thereby light environments for any of the tested water types. However, water type and depth appear to jointly affect in situ DOC concentrations across the tested depth-dependent light gradient. Corroborative ex situ measurements of excitation pressure on photosystem II suggest that photoinhibition in Dictyota sp. is likely to occur at light intensities that are commonly present on Curaçaoan coral reefs under high light levels at 5 m depth during midday. Photoinhibition may have thereby reduced the DOC release of Dictyota sp. and DOC concentrations in its close proximity. Our results indicate that the occurrence of elevated DOC concentrations did not follow a natural light gradient across depth. Instead, a combination of multiple factors, such as water type, light

Arctic Riverine CDOM and its effects on the Polar Marine Light Field

Energy Technology Data Exchange (ETDEWEB)

Orandle, Zoe Ann [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Weijer, Wilbert [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Elliott, Scott M. [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Wang, Shanlin [Los Alamos National Lab. (LANL), Los Alamos, NM (United States)

2016-09-28

It is well-known that CDOM (Chromophoric Dissolved Organic Matter) can have a significant effect on biological activity in the photic zones of aquatic ecosystems. However, the extent of CDOM’s interference with biological activity is not well-known. We examined this issue in great detail in the mixed surface layer of the Arctic Ocean. We studied the impacts of CDOM’s light attenuation on Arctic phytoplankton populations to discover if riverine CDOM’s presence in the Arctic ocean could inhibit and possibly prevent local phytoplankton populations from performing photosynthesis. We incorporated biogeochemistry concepts and data with oceanographic models and calculations to approach the problem. The results showed that riverine CDOM can indeed significantly impact the productivity of phytoplankton populations during the spring and summer months near the major Arctic river mouths we chose to examine. Although our study was detailed and inclusive of many variables, the issue of CDOM’s light attenuation and its effects on phytoplankton populations must be explored on a global scale to help understand if riverine CDOM could prove disastrous for phytoplankton populations.

Aged riverine particulate organic carbon in four UK catchments

International Nuclear Information System (INIS)

Adams, Jessica L.; Tipping, Edward; Bryant, Charlotte L.; Helliwell, Rachel C.; Toberman, Hannah; Quinton, John

2015-01-01

The riverine transport of particulate organic matter (POM) is a significant flux in the carbon cycle, and affects macronutrients and contaminants. We used radiocarbon to characterise POM at 9 riverine sites of four UK catchments (Avon, Conwy, Dee, Ribble) over a one-year period. High-discharge samples were collected on three or four occasions at each site. Suspended particulate matter (SPM) was obtained by centrifugation, and the samples were analysed for carbon isotopes. Concentrations of SPM and SPM organic carbon (OC) contents were also determined, and were found to have a significant negative correlation. For the 7 rivers draining predominantly rural catchments, PO 14 C values, expressed as percent modern carbon absolute (pMC), varied little among samplings at each site, and there was no significant difference in the average values among the sites. The overall average PO 14 C value for the 7 sites of 91.2 pMC corresponded to an average age of 680 14 C years, but this value arises from the mixing of differently-aged components, and therefore significant amounts of organic matter older than the average value are present in the samples. Although topsoil erosion is probably the major source of the riverine POM, the average PO 14 C value is appreciably lower than topsoil values (which are typically 100 pMC). This is most likely explained by inputs of older subsoil OC from bank erosion, or the preferential loss of high- 14 C topsoil organic matter by mineralisation during riverine transport. The significantly lower average PO 14 C of samples from the River Calder (76.6 pMC), can be ascribed to components containing little or no radiocarbon, derived either from industrial sources or historical coal mining, and this effect is also seen in the River Ribble, downstream of its confluence with the Calder. At the global scale, the results significantly expand available information for PO 14 C in rivers draining catchments with low erosion rates. - Highlights: �

Irrigation of DOC-rich liquid promotes potential denitrification rate and decreases N

NARCIS (Netherlands)

Qin, Shuping; Hu, Chunsheng; Clough, Tim J.; Luo, Jiafa; Oenema, Oene; Zhou, Shungui

2017-01-01

Lack of dissolved organic carbon (DOC) is generally one of the key factors limiting denitrification in subsoil beneath the root zone. Despite a number of laboratory DOC amendment studies, the effects of in situ DOC infiltration on subsoil denitrification, and on subsequent end product

Link between DOC in near surface peat and stream water in an upland catchment.

Science.gov (United States)

Clark, Joanna M; Lane, Stuart N; Chapman, Pippa J; Adamson, John K

2008-10-15

Hydrologic transport of dissolved organic carbon (DOC) from peat soils may differ to organo-mineral soils in how they responded to changes in flow, because of differences in soil profile and hydrology. In well-drained organo-mineral soils, low flow is through the lower mineral layer where DOC is absorbed and high flow is through the upper organic layer where DOC is produced. DOC concentrations in streams draining organo-mineral soils typically increase with flow. In saturated peat soils, both high and low flows are through an organic layer where DOC is produced. Therefore, DOC in stream water draining peat may not increase in response to changes in flow as there is no switch in flow path between a mineral and organic layer. To verify this, we conducted a high-resolution monitoring study of soil and stream water at an upland peat catchment in northern England. Our data showed a strong positive correlation between DOC concentrations at -1 and -5 cm depth and stream water, and weaker correlations between concentrations at -20 to -50 cm depth and stream water. Although near surface organic material appears to be the key source of stream water DOC in both peat and organo-mineral soils, we observed a negative correlation between stream flow and DOC concentrations instead of a positive correlation as DOC released from organic layers during low and high flow was diluted by rainfall. The differences in DOC transport processes between peat and organo-mineral soils have different implications for our understanding of long-term changes in DOC exports. While increased rainfall may cause an increase in DOC flux from peat due to an increase in water volume, it may cause a decrease in concentrations. This response is contrary to expected changes in DOC exports from organo-mineral soils, where increase rainfall is likely to result in an increase in flux and concentration.

Quantifying tropical peatland dissolved organic carbon (DOC) using UV-visible spectroscopy.

Science.gov (United States)

Cook, Sarah; Peacock, Mike; Evans, Chris D; Page, Susan E; Whelan, Mick J; Gauci, Vincent; Kho, Lip Khoon

2017-05-15

UV-visible spectroscopy has been shown to be a useful technique for determining dissolved organic carbon (DOC) concentrations. However, at present we are unaware of any studies in the literature that have investigated the suitability of this approach for tropical DOC water samples from any tropical peatlands, although some work has been performed in other tropical environments. We used water samples from two oil palm estates in Sarawak, Malaysia to: i) investigate the suitability of both single and two-wavelength proxies for tropical DOC determination; ii) develop a calibration dataset and set of parameters to calculate DOC concentrations indirectly; iii) provide tropical researchers with guidance on the best spectrophotometric approaches to use in future analyses of DOC. Both single and two-wavelength model approaches performed well with no one model significantly outperforming the other. The predictive ability of the models suggests that UV-visible spectroscopy is both a viable and low cost method for rapidly analyzing DOC in water samples immediately post-collection, which can be important when working at remote field sites with access to only basic laboratory facilities. Copyright © 2017 The Authors. Published by Elsevier Ltd.. All rights reserved.

Hydrological connectivity for riverine fish: measurement challenges and research opportunities

Science.gov (United States)

Fullerton, A.H.; Burnett, K.M.; Steel, E.A.; Flitcroft, R.L.; Pess, G.R.; Feist, B.E.; Torgersen, Christian E.; Miller, D.J.; Sanderson, B.L.

2010-01-01

In this review, we first summarize how hydrologic connectivity has been studied for riverine fish capable of moving long distances, and then identify research opportunities that have clear conservation significance. Migratory species, such as anadromous salmonids, are good model organisms for understanding ecological connectivity in rivers because the spatial scale over which movements occur among freshwater habitats is large enough to be easily observed with available techniques; they are often economically or culturally valuable with habitats that can be easily fragmented by human activities; and they integrate landscape conditions from multiple surrounding catchment(s) with in‐river conditions. Studies have focussed on three themes: (i) relatively stable connections (connections controlled by processes that act over broad spatio‐temporal scales >1000 km2 and >100 years); (ii) dynamic connections (connections controlled by processes acting over fine to moderate spatio‐temporal scales ∼1–1000 km2 and hydrologic connectivity, including actions that disrupt or enhance natural connections experienced by fish.We outline eight challenges to understanding the role of connectivity in riverine fish ecology, organized under three foci: (i) addressing the constraints of river structure; (ii) embracing temporal complexity in hydrologic connectivity; and (iii) managing connectivity for riverine fishes. Challenges include the spatial structure of stream networks, the force and direction of flow, scale‐dependence of connectivity, shifting boundaries, complexity of behaviour and life histories and quantifying anthropogenic influence on connectivity and aligning management goals. As we discuss each challenge, we summarize relevant approaches in the literature and provide additional suggestions for improving research and management of connectivity for riverine fishes.Specifically, we suggest that rapid advances are possible in the following arenas: (i

Urinary schistosomiasis in Yauri riverine area Kebbi State, Nigeria ...

African Journals Online (AJOL)

Infection with Schistosoma haematobium was investigated in the riverine area of Yauri Metropolis in Kebbi State, north-western Nigeria between April-June 2013, using sedimentation technique. Out of 206 persons examined (106 males and 100 females), 87 (42.2%) were infected with Schistosoma haematobium.

Modelling impacts of atmospheric deposition and temperature on long-term DOC trends.

Science.gov (United States)

Sawicka, K; Rowe, E C; Evans, C D; Monteith, D T; E I Vanguelova; Wade, A J; J M Clark

2017-02-01

It is increasingly recognised that widespread and substantial increases in Dissolved organic carbon (DOC) concentrations in remote surface, and soil, waters in recent decades are linked to declining acid deposition. Effects of rising pH and declining ionic strength on DOC solubility have been proposed as potential dominant mechanisms. However, since DOC in these systems is derived mainly from recently-fixed carbon, and since organic matter decomposition rates are considered sensitive to temperature, uncertainty persists over the extent to which other drivers that could influence DOC production. Such potential drivers include fertilisation by nitrogen (N) and global warming. We therefore ran the dynamic soil chemistry model MADOC for a range of UK soils, for which time series data are available, to consider the likely relative importance of decreased deposition of sulphate and chloride, accumulation of reactive N, and higher temperatures, on soil DOC production in different soils. Modelled patterns of DOC change generally agreed favourably with measurements collated over 10-20years, but differed markedly between sites. While the acidifying effect of sulphur deposition appeared to be the predominant control on the observed soil water DOC trends in all the soils considered other than a blanket peat, the model suggested that over the long term, the effects of nitrogen deposition on N-limited soils may have been sufficient to raise the "acid recovery DOC baseline" significantly. In contrast, reductions in non-marine chloride deposition and effects of long term warming appeared to have been relatively unimportant. The suggestion that future DOC concentrations might exceed preindustrial levels as a consequence of nitrogen pollution has important implications for drinking water catchment management and the setting and pursuit of appropriate restoration targets, but findings still require validation from reliable centennial-scale proxy records, such as those being developed

Photochemical mineralization of terrigenous DOC to dissolved inorganic carbon in ocean

OpenAIRE

Aarnos, Hanna; Gélinas, Yves; Kasurinen, Ville; Gu, Yufei; Puupponen, Veli-Mikko; Vähätalo, Anssi

2018-01-01

When terrigenous dissolved organic carbon (tDOC) rich in chromophoric dissolved organic matter (tCDOM) enters the ocean, solar radiation mineralizes it partially into dissolved inorganic carbon (DIC). This study addresses the amount and the rates of DIC photoproduction from tDOC and the area of ocean required to photomineralize tDOC. We collected water samples from 10 major rivers, mixed them with artificial seawater, and irradiated them with simulated solar radiation to measure DIC photoprod...

AR DOC: Augmented reality documentaries

DEFF Research Database (Denmark)

Vistisen, Peter

2014-01-01

Augmented Reality Documentaries (AR DOC) er et ’lille’ Shareplay projekt (ansøgte midler augmented reality cross media løsninger, til at skabe engagerende publikumsformidling...... indenfor oplevelsesindustrien. Projektet har genereret ny viden omkring, hvordan fysisk og digital formidling kan understøttes via Augmented Reality som formidlingsformat....

G-DOC Plus - an integrative bioinformatics platform for precision medicine.

Science.gov (United States)

Bhuvaneshwar, Krithika; Belouali, Anas; Singh, Varun; Johnson, Robert M; Song, Lei; Alaoui, Adil; Harris, Michael A; Clarke, Robert; Weiner, Louis M; Gusev, Yuriy; Madhavan, Subha

2016-04-30

G-DOC Plus is a data integration and bioinformatics platform that uses cloud computing and other advanced computational tools to handle a variety of biomedical BIG DATA including gene expression arrays, NGS and medical images so that they can be analyzed in the full context of other omics and clinical information. G-DOC Plus currently holds data from over 10,000 patients selected from private and public resources including Gene Expression Omnibus (GEO), The Cancer Genome Atlas (TCGA) and the recently added datasets from REpository for Molecular BRAin Neoplasia DaTa (REMBRANDT), caArray studies of lung and colon cancer, ImmPort and the 1000 genomes data sets. The system allows researchers to explore clinical-omic data one sample at a time, as a cohort of samples; or at the level of population, providing the user with a comprehensive view of the data. G-DOC Plus tools have been leveraged in cancer and non-cancer studies for hypothesis generation and validation; biomarker discovery and multi-omics analysis, to explore somatic mutations and cancer MRI images; as well as for training and graduate education in bioinformatics, data and computational sciences. Several of these use cases are described in this paper to demonstrate its multifaceted usability. G-DOC Plus can be used to support a variety of user groups in multiple domains to enable hypothesis generation for precision medicine research. The long-term vision of G-DOC Plus is to extend this translational bioinformatics platform to stay current with emerging omics technologies and analysis methods to continue supporting novel hypothesis generation, analysis and validation for integrative biomedical research. By integrating several aspects of the disease and exposing various data elements, such as outpatient lab workup, pathology, radiology, current treatments, molecular signatures and expected outcomes over a web interface, G-DOC Plus will continue to strengthen precision medicine research. G-DOC Plus is available

N-mix for fish: estimating riverine salmonid habitat selection via N-mixture models

Science.gov (United States)

Som, Nicholas A.; Perry, Russell W.; Jones, Edward C.; De Juilio, Kyle; Petros, Paul; Pinnix, William D.; Rupert, Derek L.

2018-01-01

Models that formulate mathematical linkages between fish use and habitat characteristics are applied for many purposes. For riverine fish, these linkages are often cast as resource selection functions with variables including depth and velocity of water and distance to nearest cover. Ecologists are now recognizing the role that detection plays in observing organisms, and failure to account for imperfect detection can lead to spurious inference. Herein, we present a flexible N-mixture model to associate habitat characteristics with the abundance of riverine salmonids that simultaneously estimates detection probability. Our formulation has the added benefits of accounting for demographics variation and can generate probabilistic statements regarding intensity of habitat use. In addition to the conceptual benefits, model application to data from the Trinity River, California, yields interesting results. Detection was estimated to vary among surveyors, but there was little spatial or temporal variation. Additionally, a weaker effect of water depth on resource selection is estimated than that reported by previous studies not accounting for detection probability. N-mixture models show great promise for applications to riverine resource selection.

Aged riverine particulate organic carbon in four UK catchments

Energy Technology Data Exchange (ETDEWEB)

Adams, Jessica L., E-mail: jesams@ceh.ac.uk [Centre for Ecology and Hydrology, Lancaster Environment Centre, Lancaster, LA1 4AP (United Kingdom); Tipping, Edward, E-mail: et@ceh.ac.uk [Centre for Ecology and Hydrology, Lancaster Environment Centre, Lancaster, LA1 4AP (United Kingdom); Bryant, Charlotte L., E-mail: charlotte.bryant@glasgow.ac.uk [NERC Radiocarbon Facility, East Kilbride G75 0QF, Scotland (United Kingdom); Helliwell, Rachel C., E-mail: rachel.helliwell@hutton.ac.uk [The James Hutton Institute, Craigiebuckler, Aberdeen AB15 8QH Scotland (United Kingdom); Toberman, Hannah, E-mail: hannahtoberman@hotmail.com [Centre for Ecology and Hydrology, Lancaster Environment Centre, Lancaster, LA1 4AP (United Kingdom); School of Environmental Sciences, University of Liverpool, Liverpool L69 3GP (United Kingdom); Quinton, John, E-mail: j.quinton@lancaster.ac.uk [Lancaster Environment Centre, Lancaster University, Lancaster LA1 4YQ (United Kingdom)

2015-12-01

The riverine transport of particulate organic matter (POM) is a significant flux in the carbon cycle, and affects macronutrients and contaminants. We used radiocarbon to characterise POM at 9 riverine sites of four UK catchments (Avon, Conwy, Dee, Ribble) over a one-year period. High-discharge samples were collected on three or four occasions at each site. Suspended particulate matter (SPM) was obtained by centrifugation, and the samples were analysed for carbon isotopes. Concentrations of SPM and SPM organic carbon (OC) contents were also determined, and were found to have a significant negative correlation. For the 7 rivers draining predominantly rural catchments, PO{sup 14}C values, expressed as percent modern carbon absolute (pMC), varied little among samplings at each site, and there was no significant difference in the average values among the sites. The overall average PO{sup 14}C value for the 7 sites of 91.2 pMC corresponded to an average age of 680 {sup 14}C years, but this value arises from the mixing of differently-aged components, and therefore significant amounts of organic matter older than the average value are present in the samples. Although topsoil erosion is probably the major source of the riverine POM, the average PO{sup 14}C value is appreciably lower than topsoil values (which are typically 100 pMC). This is most likely explained by inputs of older subsoil OC from bank erosion, or the preferential loss of high-{sup 14}C topsoil organic matter by mineralisation during riverine transport. The significantly lower average PO{sup 14}C of samples from the River Calder (76.6 pMC), can be ascribed to components containing little or no radiocarbon, derived either from industrial sources or historical coal mining, and this effect is also seen in the River Ribble, downstream of its confluence with the Calder. At the global scale, the results significantly expand available information for PO{sup 14}C in rivers draining catchments with low erosion rates

An Analysis of the Employment of the LVT-5 in Riverine Operations in Vietnam and Recommendations for the Employment of the AAAV in Future Riverine Operations

National Research Council Canada - National Science Library

Coggins, David

2002-01-01

... of the maneuver commander. The LVT used in Vietnam was not ideally suited for riverine operations, but techniques, tactics, and procedures were developed to allow for the maximum employment of LVTs in the brown water...

75 FR 12496 - Proposed Information Collection; Comment Request; DOC National Environmental Policy Act...

Science.gov (United States)

2010-03-16

...; DOC National Environmental Policy Act Environmental Questionnaire and Checklist AGENCY: Office of the...., Washington, DC 20230 (or via the Internet at [email protected]doc.gov ). FOR FURTHER INFORMATION CONTACT: Requests for... Constitution Avenue, NW., Washington, DC 20230 (or via the Internet at [email protected]doc.gov ). SUPPLEMENTARY...

Impacts of the Nutrient Inputs from Riverine on the Dynamic and Community Structure of Fungal-like Protists in the Coastal Ocean Ecosystems

Science.gov (United States)

Duan, Y.; Wang, G.; Xie, N.

2016-02-01

The coastal ocean connects terrestrial (e.g., rivers and estuaries) with oceanic ecosystems and is considered as a major component of global carbon cycles and budgets. The coastal waters are featured with a high biodiversity and high primary production. Because of the excessive primary production, a large fraction of primary organic matter becomes available to consumers as detritus in the coastal waters. Bacterioplankton have long been known to play a key role in the degradation of this detritus, and export and storage of organic matter in the coastal ecosystems. However, the primary and secondary production and the carbon biogeochemical processes in the ecosystems are largely regulated by nutrient inputs from riverine and other anthropogenic activities through heterotrophic microbial communities. Thraustochytrids, commonly known as fungal-like protists, are unicellular heterotrophic protists and are recently acknowledged to play a significant role in ocean carbon cycling. Their abundance exceeds that of bacterioplankton in the most time of the year in the coastal waters of China. Also, their abundance and diversity are largely regulated by nutrients inputs from riverine and other anthropogenic activities. Our findings support that thraustochytrids are a dominant heterotrophic microbial group in the coastal waters. Evidently, thraustochytrids are an import, but neglected, component in microbial carbon biogeochemical processes of the coastal ocean.

Riverine export of dissolved organic carbon to the Gulf of Maine

Science.gov (United States)

Huntington, T. G.; Aiken, G.

2013-12-01

Land-to-sea carbon transport of dissolved organic carbon (DOC) is an important part of the carbon cycle that can affect long-term carbon sequestration, satellite-derived ocean color metrics, and ocean primary productivity and biogeochemistry. Using continuous discharge data and discrete sampling we estimated DOC fluxes from rivers covering about 68% of the watershed that drains to the Gulf of Maine (GoM) for water years (October through September) 2011 and 2012. Estimates for rivers entering the GoM in the USA were made using LOADEST regression software that fits a seasonally-adjusted concentration discharge relation to the data. The basin area-weighted 95% confidence limits about the LOADEST mean fluxes averaged 8.1% for the lower limit and 8.9% for the upper limit. Estimates for rivers entering the GoM in Canada were obtained from previously published estimates. Carbon yield tends to increase from southwest (35 to 36 kg C/ha/yr) to a maximum of 76 kg C/ha/yr for the Penobscot River and then decline further to the northeast (61 kg C/ha/yr in the St. John River and 41 kg C/ha/yr in the rest of New Brunswick and Nova Scotia). The area-weighted average carbon yield for all measured basins was 54.5 kg C/ha/yr. The variation in carbon yield is most closely associated with the amount of runoff and wetland area within a river basin. Simple area-weighted extrapolation to the entire GoM basin resulted in an estimate of 9.8 x 105 metric tons C per year for the WY2011 and WY2012 period. Runoff is the dominant control on intra and inter-annual variation in DOC flux because runoff varies much more than DOC concentration at these temporal scales. Runoff is usually low during the winter, peaks in the spring during snowmelt, decreases to a minimum in late summer and increases again in the fall when transpiration decreases. DOC concentration is low during the winter and snowmelt-dominated spring period, generally increases through the summer, and peaks during the fall. DOC flux to

Optimal strategies for controlling riverine tsetse flies using targets: a modelling study.

Directory of Open Access Journals (Sweden)

Glyn A Vale

2015-03-01

Full Text Available Tsetse flies occur in much of sub-Saharan Africa where they transmit the trypanosomes that cause the diseases of sleeping sickness in humans and nagana in livestock. One of the most economical and effective methods of tsetse control is the use of insecticide-treated screens, called targets, that simulate hosts. Targets have been ~1 m2, but recently it was shown that those tsetse that occupy riverine situations, and which are the main vectors of sleeping sickness, respond well to targets only ~0.06 m2. The cheapness of these tiny targets suggests the need to reconsider what intensity and duration of target deployments comprise the most cost-effective strategy in various riverine habitats.A deterministic model, written in Excel spreadsheets and managed by Visual Basic for Applications, simulated the births, deaths and movement of tsetse confined to a strip of riverine vegetation composed of segments of habitat in which the tsetse population was either self-sustaining, or not sustainable unless supplemented by immigrants. Results suggested that in many situations the use of tiny targets at high density for just a few months per year would be the most cost-effective strategy for rapidly reducing tsetse densities by the ~90% expected to have a great impact on the incidence of sleeping sickness. Local elimination of tsetse becomes feasible when targets are deployed in isolated situations, or where the only invasion occurs from populations that are not self-sustaining.Seasonal use of tiny targets deserves field trials. The ability to recognise habitat that contains tsetse populations which are not self-sustaining could improve the planning of all methods of tsetse control, against any species, in riverine, savannah or forest situations. Criteria to assist such recognition are suggested.

Quantification of dissolved organic carbon (DOC) storage in lakes and reservoirs of mainland China.

Science.gov (United States)

Song, Kaishan; Wen, Zhidan; Shang, Yingxing; Yang, Hong; Lyu, Lili; Liu, Ge; Fang, Chong; Du, Jia; Zhao, Ying

2018-04-04

As a major fraction of carbon in inland waters, dissolved organic carbon (DOC) plays a crucial role in carbon cycling on a global scale. However, the quantity of DOC stored in lakes and reservoirs was not clear to date. In an attempt to examine the factors that determine the DOC storage in lakes and reservoirs across China, we assembled a large database (measured 367 lakes, and meta-analyzed 102 lakes from five limnetic regions; measured 144 reservoirs, and meta-analyzed 272 reservoirs from 31 provincial units) of DOC concentrations and water storages for lakes and reservoirs that are used to determine DOC storage in static inland waters. We found that DOC concentrations in saline waters (Mean/median ± S.D: 50.5/30.0 ± 55.97 mg/L) are much higher than those in fresh waters (8.1/5.9 ± 6.8 mg/L), while lake DOC concentrations (25.9/11.5 ± 42.04 mg/L) are much higher than those in reservoirs (5.0/3.8 ± 4.5 mg/L). In terms of lake water volume and DOC storage, the Tibet-Qinghai lake region has the largest water volume (552.8 km 3 ), 92% of which is saline waters, thus the largest DOC (13.39 Tg) is stored in these alpine lake region; followed by the Mengxin lake region, having a water volume of 99.4 km 3 in which 1.75 Tg DOC was stored. Compared to Mengxin lake region, almost the same amount of water was stored in East China lake region (91.9 km 3 ), however, much less DOC was stored in this region (0.43 Tg) due to the lower DOC concentration (Ave: 3.45 ± 2.68 mg/L). According to our investigation, Yungui and Northeast lake regions had water storages of 32.14 km 3 and 19.44 km 3 respectively, but relatively less DOC was stored in Yungui (0.13 Tg) than in Northeast lake region (0.19 Tg). Due to low DOC concentration in reservoirs, especially these large reservoirs having lower DOC concentration (V > 1.0 km 3 : 2.31 ± 1.48 mg/L), only 1.54 Tg was stored in a 485.1 km 3 volume of water contained

Music interventions in disorders of consciousness (DOC) - a systematic review.

Science.gov (United States)

Grimm, Teresa; Kreutz, Gunter

2018-03-22

The effects of music interventions including active and receptive music therapy for people living with neurogenic disorders of consciousness (DOC) have been subject to empirical studies in the past. The aim of this systematic review was to find and analyse the current research about the effects of musical interventions on people with DOC. For this purpose, studies with music interventions and patients with DOC from the year 1900 to 2017 were searched in English, German, and French in different databases. Risk-of-bias-analyses were conducted for each study that fulfilled the inclusion criteria. Twenty-two quantitative studies (three randomised controlled trials with more than 10 participants) were found eligible for review. They include a total of 329 participants living with either coma, unresponsive wakefulness syndrome, or minimally conscious state. Music interventions were associated with favourable behavioural and physiological responses in several studies, but methodological quality and outcomes were heterogeneous. More studies with a larger number of participants are needed as well as a consensus on key characteristics of effective short-term and long-term music interventions for DOC.

Riverine dominance of a nearshore marine demersal food web ...

African Journals Online (AJOL)

The aim of this study was to determine (i) the importance of riverine and marine organic matter for the Thukela Bank food web; and (ii) whether there are seasonal changes in the Thukela River stable isotope values, and, if so, whether these are reflected in the isotope values of demersal organisms. Estuarine organic matter ...

Nonlinear and threshold-dominated runoff generation controls DOC export in a small peat catchment

Science.gov (United States)

Birkel, C.; Broder, T.; Biester, H.

2017-03-01

We used a relatively simple two-layer, coupled hydrology-biogeochemistry model to simultaneously simulate streamflow and stream dissolved organic carbon (DOC) concentrations in a small lead and arsenic contaminated upland peat catchment in northwestern Germany. The model procedure was informed by an initial data mining analysis, in combination with regression relationships of discharge, DOC, and element export. We assessed the internal model DOC processing based on stream DOC hysteresis patterns and 3-hourly time step groundwater level and soil DOC data for two consecutive summer periods in 2013 and 2014. The parsimonious model (i.e., few calibrated parameters) showed the importance of nonlinear and rapid near-surface runoff generation mechanisms that caused around 60% of simulated DOC load. The total load was high even though these pathways were only activated during storm events on average 30% of the monitoring time—as also shown by the experimental data. Overall, the drier period 2013 resulted in increased nonlinearity but exported less DOC (115 kg C ha-1 yr-1 ± 11 kg C ha-1 yr-1) compared to the equivalent but wetter period in 2014 (189 kg C ha-1 yr-1 ± 38 kg C ha-1 yr-1). The exceedance of a critical water table threshold (-10 cm) triggered a rapid near-surface runoff response with associated higher DOC transport connecting all available DOC pools and subsequent dilution. We conclude that the combination of detailed experimental work with relatively simple, coupled hydrology-biogeochemistry models not only allowed the model to be internally constrained but also provided important insight into how DOC and tightly coupled pollutants or trace elements are mobilized.

Analysis of Serbian Military Riverine Units Capability for Participation in the United Nations Peacekeeping Operations

Directory of Open Access Journals (Sweden)

Slobodan Radojevic

2017-06-01

Full Text Available This paper analyses required personnel, training capacities and equipment for participation in the United Nations peacekeeping operations with the riverine elements. In order to meet necessary capabilities for engagement in United Nations peacekeeping operations, Serbian military riverine units have to be compatible with the issued UN requirements. Serbian Armed Forces have the potential to reach such requirements with the River Flotilla as a pivot for the participation in UN missions. Serbian Military Academy adopted and developed educational and training program in accordance with the provisions and recommendations of the IMO conventions and IMO model courses. Serbian Military Academy has opportunities for education and training military riverine units for participation in the United Nations peacekeeping operations. Moreover, Serbia has Multinational Operations Training Center and Peacekeeping Operations Center certified to provide selection, training, equipping and preparations of individuals and units to the United Nations multinational operations.

Dissolved organic carbon and chromophoric dissolved organic matter properties of rivers in the USA

Science.gov (United States)

Spencer, Robert G. M.; Butler, Kenna D.; Aiken, George R.

2012-09-01

Dissolved organic carbon (DOC) concentration and chromophoric dissolved organic matter (CDOM) parameters were measured over a range of discharge in 30 U.S. rivers, covering a diverse assortment of fluvial ecosystems in terms of watershed size and landscape drained. Relationships between CDOM absorption at a range of wavelengths (a254, a350, a440) and DOC in the 30 watersheds were found to correlate strongly and positively for the majority of U.S. rivers. However, four rivers (Colorado, Colombia, Rio Grande and St. Lawrence) exhibited statistically weak relationships between CDOM absorption and DOC. These four rivers are atypical, as they either drain from the Great Lakes or experience significant impoundment of water within their watersheds, and they exhibited values for dissolved organic matter (DOM) parameters indicative of autochthonous or anthropogenic sources or photochemically degraded allochthonous DOM and thus a decoupling between CDOM and DOC. CDOM quality parameters in the 30 rivers were found to be strongly correlated to DOM compositional metrics derived via XAD fractionation, highlighting the potential for examining DOM biochemical quality from CDOM measurements. This study establishes the ability to derive DOC concentration from CDOM absorption for the majority of U.S. rivers, describes characteristics of riverine systems where such an approach is not valid, and emphasizes the possibility of examining DOM composition and thus biogeochemical function via CDOM parameters. Therefore, the usefulness of CDOM measurements, both laboratory-based analyses and in situ instrumentation, for improving spatial and temporal resolution of DOC fluxes and DOM dynamics in future studies is considerable in a range of biogeochemical studies.

Dissolved organic carbon and chromophoric dissolved organic matter properties of rivers in the USA

Science.gov (United States)

Spencer, Robert G.M.; Butler, Kenna D.; Aiken, George R.

2012-01-01

Dissolved organic carbon (DOC) concentration and chromophoric dissolved organic matter (CDOM) parameters were measured over a range of discharge in 30 U.S. rivers, covering a diverse assortment of fluvial ecosystems in terms of watershed size and landscape drained. Relationships between CDOM absorption at a range of wavelengths (a254, a350, a440) and DOC in the 30 watersheds were found to correlate strongly and positively for the majority of U.S. rivers. However, four rivers (Colorado, Colombia, Rio Grande and St. Lawrence) exhibited statistically weak relationships between CDOM absorption and DOC. These four rivers are atypical, as they either drain from the Great Lakes or experience significant impoundment of water within their watersheds, and they exhibited values for dissolved organic matter (DOM) parameters indicative of autochthonous or anthropogenic sources or photochemically degraded allochthonous DOM and thus a decoupling between CDOM and DOC. CDOM quality parameters in the 30 rivers were found to be strongly correlated to DOM compositional metrics derived via XAD fractionation, highlighting the potential for examining DOM biochemical quality from CDOM measurements. This study establishes the ability to derive DOC concentration from CDOM absorption for the majority of U.S. rivers, describes characteristics of riverine systems where such an approach is not valid, and emphasizes the possibility of examining DOM composition and thus biogeochemical function via CDOM parameters. Therefore, the usefulness of CDOM measurements, both laboratory-based analyses and in situ instrumentation, for improving spatial and temporal resolution of DOC fluxes and DOM dynamics in future studies is considerable in a range of biogeochemical studies.

Deforestation Analysis of Riverine Forest of Sindh Using Remote Sensing Techniques

Directory of Open Access Journals (Sweden)

Habibullah Abbasi

2011-07-01

Full Text Available During recent decades the large scale deterioration of forests and natural resources is an eye opener. The degradation of forests and other natural resources has affected the ecology, environment, health and economy. The ecological problems with living organisms such as animals and plants and environmental problems such as increase in temperature and carbon dioxide, these factors have contributed to change in regional climate, health problems such as skin, eye diseases and sunstroke and economic problems such as loss of income to rural population and resources which depend on forests such as livestock. Therefore, it was necessary to carry out land cover/use research focusing on the monitoring and management of the present and past state of forests cover and other related objects using RS (Remote Sensing technologies. The RS is a way of mapping and monitoring the changes taking place in forests cover and other objects on a continuing basis. Sukkur and Shikarpur riverine forests are vanishing quickly due to the construction of barrages /dams on upper streams to produce hydroelectricity and irrigation installations which reduce the discharge of fresh water into the downstream Indus basin. Moreover, anthropogenic activities, livestock population, increased grazing, load and illegal tree cutting have contributed to this. The riverine forests are turning into barren land and most of the land is used for agriculture. These uncontrolled changes contribute to climate change and global warming. These changes are difficult to monitor and control without using RS technology. Assessment of deforestation of the Sukkur and Shikarpur to find temporal changes in the forests cover from April, 1979 to April, 2009 is presented in this paper. The integrated classes such as water body, grass/agriculture land, dry/barren land and forest cover maps show the temporal changes taking place in the forests cover for the last 30 years period. RS has been employed in the

Characteristics and sources analysis of riverine chromophoric dissolved organic matter in Liaohe River, China.

Science.gov (United States)

Shao, Tiantian; Song, Kaishan; Jacinthe, Pierre-Andre; Du, Jia; Zhao, Ying; Ding, Zhi; Guan, Ying; Bai, Zhang

2016-12-01

Chromophoric dissolved organic matter (CDOM) in riverine systems can be affected by environmental conditions and land-use, and thus could provide important information regarding human activities in surrounding landscapes. The optical properties of water samples collected at 42 locations across the Liaohe River (LHR, China) watershed were examined using UV-Vis and fluorescence spectroscopy to determine CDOM characteristics, composition and sources. Total nitrogen (TN) and total phosphorus (TP) concentrations at all sampling sites exceeded the GB3838-2002 (national quality standards for surface waters, China) standard for Class V waters of 2.0 mg N/L and 0.4 mg P/L respectively, while trophic state index (TSI M ) indicated that all the sites investigated were mesotrophic, 64% of which were eutrophic at the same time. Redundancy analysis showed that total suspended matter (TSM), dissolved organic carbon (DOC), and turbidity had a strong correlation with CDOM, while the other parameters (Chl a, TN, TP and TSI M ) exhibited weak correlations with CDOM absorption. High spectral slope values and low SUVA254 (the specific UV absorption) values indicated that CDOM in the LHR was primarily comprised of low molecular weight organic substances. Analysis of excitation-emission matrices contour plots showed that CDOM in water samples collected from upstream locations exhibited fulvic-acid-like characteristics whereas protein-like substances were most likely predominant in samples collected in estuarine areas and downstream from large cities. These patterns were interpreted as indicative of water pollution from urban and industrial activities in several downstream sections of the LHR watershed.

DOC:NO3- ratios and NO3- uptake in forested headwater streams

Science.gov (United States)

Rodríguez-Cardona, Bianca; Wymore, Adam S.; McDowell, William H.

2016-01-01

The underlying mechanisms driving the coupled interactions between inorganic nitrogen uptake and dissolved organic matter are not well understood, particularly in surface waters. To determine the relationship between dissolved organic carbon (DOC) quantity and nitrate (NO3-) uptake kinetics in streams, we performed a series of NO3- Tracer Additions for Spiraling Curve Characterization experiments in four streams within the Lamprey River Watershed, New Hampshire, across a range in background DOC concentrations (1-8 mg C/L). Experiments were performed throughout the 2013 and 2014 growing seasons. Across streams and experimental dates, ambient uptake velocity (Vf) correlated positively with increasing DOC concentrations and DOC:NO3- ratios but was only weakly negatively associated with NO3- concentrations. Ambient NO3- Vf was unrelated to pH, light, temperature, dissolved oxygen, and Specific Ultraviolet Absorbance at 254 nm. Although there were general tendencies across the entire Lamprey River Watershed, individual sites behaved differently in their uptake kinetics. NO3- uptake dynamics in the Lamprey River Watershed are most strongly influenced by DOC concentrations rather than NO3- concentrations or physicochemical parameters, which have been identified as regional- to continental-scale drivers in previous research. Understanding the fundamental relationships between dissolved organic matter and inorganic nutrients will be important as global and climatic changes influence the delivery and production of DOC and NO3- in aquatic ecosystems.

Testing seasonal and long-term controls of streamwater DOC using empirical and process-based models.

Science.gov (United States)

Futter, Martyn N; de Wit, Heleen A

2008-12-15

Concentrations of dissolved organic carbon (DOC) in surface waters are increasing across Europe and parts of North America. Several mechanisms have been proposed to explain these increases including reductions in acid deposition, change in frequency of winter storms and changes in temperature and precipitation patterns. We used two modelling approaches to identify the mechanisms responsible for changing surface water DOC concentrations. Empirical regression analysis and INCA-C, a process-based model of stream-water DOC, were used to simulate long-term (1986--2003) patterns in stream water DOC concentrations in a small boreal stream. Both modelling approaches successfully simulated seasonal and inter-annual patterns in DOC concentration. In both models, seasonal patterns of DOC concentration were controlled by hydrology and inter-annual patterns were explained by climatic variation. There was a non-linear relationship between warmer summer temperatures and INCA-C predicted DOC. Only the empirical model was able to satisfactorily simulate the observed long-term increase in DOC. The observed long-term trends in DOC are likely to be driven by in-soil processes controlled by SO4(2-) and Cl(-) deposition, and to a lesser extent by temperature-controlled processes. Given the projected changes in climate and deposition, future modelling and experimental research should focus on the possible effects of soil temperature and moisture on organic carbon production, sorption and desorption rates, and chemical controls on organic matter solubility.

Ecological impact of Prosopis species invasion in Turkwel riverine forest, Kenya

NARCIS (Netherlands)

Muturi, G.M.; Poorter, L.; Mohren, G.M.J.; Kigomo, B.N.

2013-01-01

The impact of Prosopis species invasion in the Turkwel riverine forest in Kenya was investigated under three contrasting: Acacia, Prosopis and Mixed species (Acacia and Prosopis) canopies. Variation amongst canopies was assessed through soil nutrients and physical properties, tree characteristics

Rove beetles (Coleoptera Staphylilnidae) in neotropical riverine landscapes: characterising their distribution.

NARCIS (Netherlands)

Gutierrez Chacon, C.; Del Carmen Zuniga, M.; van Bodegom, P.M.; Chara, J.; Giraldo, L.M.

2009-01-01

1. The diversity and ecology of Staphylinidae in the Neotropical region has been poorly investigated, especially in riverine landscapes where these beetles are among the dominant organisms. Therefore, the relation between the occurrence of Staphylinidae and environmental variables was investigated

Characteristic of riverine dissolved inorganic nitrogen export in subtropic high-standing island, Taiwan

Science.gov (United States)

Lee, Li-Chin; Huang, -Chuan, Jr.; Lee, Tsung-Yu; Shih, Yu-Ting

2015-04-01

Extreme increase of anthropogenic nitrogen (e.g. fertilizer and excretion) has altered the nitrogen cycling and terrestrial ecosystems. Taiwan located between eastern Asia and Oceania is the hotspot of global riverine DIN (dissolved inorganic nitrogen, including NH4, NO3, and NO2) export, but rarely documented comprehensively. Totally 50 catchments, covering 2/3 of this island, with different anthropogenic activities are involved in this study. The monthly sampling for NH4 and seasonal sampling for NO3 and NO2 supplemented with daily discharge are used to estimate the riverine DIN export. Meanwhile, the landscape characteristics, land-use, and population density are also used to discriminate the characteristics of riverine DIN export. Results showed that the observed riverine DIN concentration and yield vary from 17.7-603.5 μM and 575.0-15588.9 kg-N km-2 yr-1 corresponding to the increase of anthropogenic activities. The arithmetic mean of DIN concentration and yield are 126.7μM and 3594.7 kg-N km-2 yr-1, respectively. The unexpected high yields can attribute to abundant precipitation, heavy fertilizer application, and high population. For concentration variation, no significant variation can be found in the pristine and agriculture-dominated catchments, whereas the strong dilution effect in the wet season is characterized in the intensively-disturbed catchments. Although there are some seasonal variations in concentration, the yields in wet season are almost doubled than that in dry season indicating the strong control of streamflow. For speciation, NH4 is the dominant species in intensively-disturbed catchment, but NO3 dominates the DIN composition for the pristine and agriculture-dominated catchments. Our result can provide a strong basis for supplementary estimation for regional to global study and DIN export control which is the aim of the Kampala Declaration on global nitrogen management. Keywords: dissolved inorganic nitrogen, anthropogenic nitrogen

Effects of Anthropogenic Nitrogen Loading on Riverine Nitrogen Export in the Northeastern USA

Science.gov (United States)

Boyer, E. W.; Goodale, C. L.; Howarth, R. W.

2001-05-01

Human activities have greatly altered the nitrogen (N) cycle, accelerating the rate of N fixation in landscapes and delivery of N to water bodies. To examine the effects of anthropogenic N inputs on riverine N export, we quantified N inputs and riverine N loss for 16 catchments along a latitudinal profile from Maine to Virginia, which encompass a range of climatic variability and are major drainages to the coast of the North Atlantic Ocean. We quantified inputs of N to each catchment: atmospheric deposition, fertilizer application, agricultural and forest biological N fixation, and the net import of N in food and feed. We compared these inputs with N losses from the system in riverine export. The importance of the relative sources varies widely by watershed and is related to land use. Atmospheric deposition was the largest source (>60%) to the forested catchments of northern New England (e.g., Penobscot and Kennebec); import of N in food was the largest source of N to the more populated regions of southern New England (e.g., Charles and Blackstone); and agricultural inputs were the dominant N sources in the Mid-Atlantic region (e.g., Schuylkill and Potomac). Total N inputs to each catchment increased with percent cover in agriculture and urban land, and decreased with percent forest. Over the combined area of the catchments, net atmospheric deposition was the largest single source input (34%), followed by imports of N in food and feed (24%), fixation in agricultural lands (21%), fertilizer use (15%), and fixation in forests (6%). Riverine export of N is well correlated with N inputs, but it accounts for only a fraction (28%) of the total N inputs. This work provides an understanding of the sources of N in landscapes, and highlights how human activities impact N cycling in the northeast region.

Riverine biodiversity conservation in South Africa: current situation and future prospects

CSIR Research Space (South Africa)

Ashton, PJ

2007-07-01

Full Text Available South Africa is richly endowed with an array of natural resources, with one exception - water. In South African water law, a river system and its associated riverine biodiversity - i.e. the entire aquatic ecosystem - is regarded as the ‘water...

Controls on the Origin and Cycling of Riverine Dissolved Inorganic Carbon in the Brazos River, Texas

Science.gov (United States)

Zeng, F.; Masiello, C. A.; Hockaday, W. C.

2008-12-01

Rivers are generally supersaturated in CO2 with respect to the atmosphere. However, there is little agreement on the sources and turnover times of excess CO2 in river waters. This is likely due to varying dominant controls on carbon sources (e.g. geologic setting, climate, land use, or human activities). In this study, we measured carbon isotopic signatures (δ13C and Δ14C) of riverine dissolved inorganic carbon (DIC), as well as solid state cross polarization/magic angle spinning (CP/MAS) 13C nuclear magnetic resonance (NMR) of particulate organic carbon (POC), to determine carbon sources fuelling respiration of the Brazos River in Texas. We found that sources of riverine CO2 varied significantly along the length of the Brazos. In the middle Brazos (between Graham and Waco), which is partially underlain by limestone, riverine DIC had average Δ14C of 74 ‰ and δ13C of -7.5 ‰, suggesting that riverine CO2 is derived almost entirely from contemporary carbon (less than 5 years old) with little evidence of carbonate input, probably due to the damming upstream of Waco. In the lower Brazos (downstream of Bryan), riverine DIC was highly depleted in 14C (average Δ14C = -148.5 ‰) and enriched in 13C (average δ13C= -9.32 ‰), indicative of the presence of old carbonate. Since there is no carbonate bedrock in contact with the river in this area, the most likely source of old carbonate is the shell used in road and building construction throughout the 19th century. Our results suggest that the effect of human activities superimposes and even surpasses the effect of natural controls (e.g. geologic setting and climate) on C cycling in the Brazos.

Long-term atmospheric nutrient inputs to the Eastern Mediterranean: sources, solubility and comparison with riverine inputs

Science.gov (United States)

Koçak, M.; Kubilay, N.; Tuǧrul, S.; Mihalopoulos, N.

2010-07-01

Aerosol and rain samples were collected at a rural site located on the coastline of the Eastern Mediterranean, Erdemli, Turkey between January 1999 and December 2007. Riverine sampling was carried out at five Rivers (Ceyhan, Seyhan, Göksu, Berdan and Lamas) draining into the Northeastern Levantine Basin (NLB) between March 2002 and July 2007. Samples were analyzed for macronutrients of phosphate, silicate, nitrate and ammonium (PO43-, Sidiss, NO3- and NH4+). Phosphate and silicate in aerosol and rainwater showed higher and larger variation during the transitional period (March-May, September) when air flows predominantly originate from North Africa and Middle East/Arabian Peninsula. Deficiency of alkaline material were found to be the main reason of the acidic rain events whilst high pH values (>7) were associated with high Sidiss concentrations due to sporadic dust events. In general, lowest nitrate and ammonium concentrations in aerosol and rainwater were associated with air flow from the Mediterranean Sea. Unlike NO3- and NH4+ (Dissolved Inorganic Nitrogen, DIN), there were statistical differences for PO43- and Sidiss solubilities in sea-water and pure-water. Solubilities of PO43- and Sidiss were found to be related with air mass back trajectories and pH. Comparison of atmospheric with riverine fluxes demonstrated that DIN and PO43- fluxes to NLB were dominated by atmosphere (~90% and ~60% respectively) whereas the input of Si was mainly derived from riverine runoff (~90%). N/P ratios (atmosphere ~233; riverine ~28) revealed that NLB receives excessive amounts of DIN and this unbalanced P and N inputs may provoke even more phosphorus deficiency. Molar Si/N ratios (atmosphere + riverine) suggested Si limitation which might cause a switch from diatom dominated phytoplankton communities to non-siliceous populations in NLB.

1999 international workshop on sustainable riverine fish habitat: proceedings

International Nuclear Information System (INIS)

1999-01-01

The workshop ended April 24, 1999 with attendance by 75 participants from Brazil, Canada, Kenya, Norway, the UK and the US. Sponsors included the World Bank, the US Dept of Energy, the provincial government of British Columbia and the Institute of Hydrology in the UK. The purpose of the workshop was to bring together a multi-disciplinary team of experts concerned with the effect of water management on the sustainability of fish resources in rivers. Those in attendance constituted a mix of scientists, utility engineers, and government regulators. There were presentations on the science and regulatory aspects of riverine fish habitat/instream flow issues from all these countries. Each day was introduced with a key note address: (1) evolution of US instream flow needs; (2) the mission of the World Commission on dams; and (3) fish habitat simulation models, verification studies and applications in multi-objective decision support systems. Three papers of interest are abstracted separately on a unique application of the instream flow incremental methodology to predict impacts on riverine aquatic habitat, total gas pressure and biological responses and fish habitat simulation models and integrated assessment tools

Doc2b synchronizes secretion from chromaffin cells by stimulating fast and inhibiting sustained release

DEFF Research Database (Denmark)

da Silva Pinheiro, Paulo César; de Wit, Heidi; Walter, Alexander M

2013-01-01

Synaptotagmin-1 and -7 constitute the main calcium sensors mediating SNARE-dependent exocytosis in mouse chromaffin cells, but the role of a closely related calcium-binding protein, Doc2b, remains enigmatic. We investigated its role in chromaffin cells using Doc2b knock-out mice and high temporal...... resolution measurements of exocytosis. We found that the calcium dependence of vesicle priming and release triggering remained unchanged, ruling out an obligatory role for Doc2b in those processes. However, in the absence of Doc2b, release was shifted from the readily releasable pool to the subsequent...... sustained component. Conversely, upon overexpression of Doc2b, the sustained component was largely inhibited whereas the readily releasable pool was augmented. Electron microscopy revealed an increase in the total number of vesicles upon Doc2b overexpression, ruling out vesicle depletion as the cause...

Purification and crystallization of Phd, the antitoxin of the phd/doc operon

International Nuclear Information System (INIS)

Garcia-Pino, Abel; Sterckx, Yann; Vandenbussche, Guy; Loris, Remy

2010-01-01

The antitoxin Phd from the phd/doc operon of bacteriophage P1 was crystallized in two distinct crystal forms. The antitoxin Phd from the phd/doc module of bacteriophage P1 was crystallized in two distinct crystal forms. Crystals of His-tagged Phd contain a C-terminally truncated version of the protein and diffract to 2.20 Å resolution. Crystals of untagged Phd purified from the Phd–Doc complex diffract to 2.25 Å resolution. These crystals are partially merohedrally twinned and contain the full-length version of the protein

A Post-Disaster Assessment of Riverine Communities Impacted by a ...

African Journals Online (AJOL)

This study adopts a post-disaster analysis of the 2012 flood event in the riverine communities of Lokoja, Nigeria. It focuses on the perceived causes and impacts of the disaster and coping mechanisms adopted by the affected populations. The study was based on a survey of 193 randomly selected households in five ...

Applicability of MIEX(®)DOC process for organics removal from NOM laden water.

Science.gov (United States)

Karpinska, Anna M; Boaventura, Rui A R; Vilar, Vítor J P; Bilyk, Andrzej; Molczan, Marek

2013-06-01

The aim of this study was to evaluate applicability of ion exchange process for organics removal from Douro River surface water at the intake of Lever water treatment plant using magnetized ion exchange resin MIEX®. Qualitative analysis of the natural organic matter present in the surface water and prediction of its amenability to removal in conventional coagulation process were assessed. Results obtained in MIEX®DOC process kinetic batch experiments allowed determination of ion exchange efficiency in dissolved organic carbon (DOC), UV absorbing organics, and true color removal. The data were compared with the efficiencies of the conventional unit processes for organics removal at Lever WTP. MIEX®DOC process revealed to be more efficient in DOC removal than conventional treatment achieving the efficiencies in the range of 61-91 %, lowering disinfection by-products formation potential of the water. DOC removal efficiency at Lever WTP depends largely on the raw water quality and ranges from 28 % for water of moderated quality to 89 % of significantly deteriorated quality. In this work, MIEX®DOC process was also used as a reference method for the determination of contribution of anionic fraction to dissolved organic matter and selectivity of the unit processes at Lever WTP for its removal.

[Variation of water DOC during the process of pre-pressure and coagulation sedimentation treatment].

Science.gov (United States)

Chen, Wen-Jing; Cong, Hai-Bing; Xu, Ya-Jun; Wang, Wei; Jiang, Xin-Yue; Liu, Yu-Jiao

2014-07-01

The aim of the study was to explore whether the pre-pressure and coagulation sedimentation process would result in algal cell disruption, leading to increased dissolved organic carbon (DOC) in water, based on which, the pressure application mode would be optimized and safe and efficient pre-pressure algae removal process would be obtained. The changes in DOC during the process of pre-pressure and preoxidation treatment, the distribution of molecular weight in water as well as the removal efficiency of algae, turbidity and DOC after coagulation and sedimentation were investigated. The results showed that the DOC in water did not increase but decreased, and the molecular weight decreased after treated with 0.5-0.8 MPa pressure. While KMnO4 and NaClO pre-oxidation both increased the DOC, in the meanwhile, the distribution of molecular weight showed no obvious change. After the pre-pressure coagulation and sedimentation process, the removal rate of algae was 96.23% and that of DOC was 29. 11%, which was by 10% - 30% higher than the rate of pre-oxidation coagulation and sedimentation process.

Non-riverine pathways of terrigenous carbon to the ocean

Science.gov (United States)

Dittmar, T.

2007-12-01

The extent and nature of non-riverine fluxes of carbon from land to ocean are poorly understood. Tidal pumping from highly productive coastal environments, atmospheric deposition and submarine groundwater discharge can be significant transport mechanisms for carbon to the ocean. Evidence is mounting that tidally-induced porewater fluxes ("outwelling") of dissolved organic matter (DOM) from mangroves and salt marshes alone may be similar in magnitude as the global riverine flux of DOM. Tidal pumping of dissolved inorganic carbon (DIC) might exceed organic carbon fluxes by far, but the existing knowledge on DIC outwelling is too scarce for a first global estimate. Results from two case studies on the biogeochemistry of DOM outwelling are presented, from the mangroves in Northern Brazil and the salt marshes in the Northern Gulf of Mexico. Ongoing research in the Northern Gulf of Mexico indicates that outwelling and groundwater inputs probably exceed riverine DOM fluxes in this region. Similar observations were made in Northern Brazil. There, the fate of mangrove-derived DOM could be traced from its source in the mangrove sediments to the outer North Brazil shelf by using a combination of isotopic and molecular approaches. Reversed-phase liquid chromatography / mass spectrometry (LC/MS) provided a multifaceted array of information that mirrors the molecular complexity of DOM. Statistical analyses on these data revealed significant differences between mangrove and open-ocean DOM which successively disappeared by irradiating the samples with natural sunlight. Nuclear magnetic resonance analyses yielded concurrent results. Ultrahigh-resolution Fourier transform-ion cyclotron resonance mass spectrometry (FT-ICR MS) is the only technique capable of resolving and identifying individual elemental compositions in these complex mixtures. We applied this technique for characterizing mangrove-derived DOM and to assess the molecular changes that occur in the initial stages of

Estimating the Cross-Shelf Export of Riverine Materials: Part 2. Estimates of Global Freshwater and Nutrient Export

Science.gov (United States)

Izett, Jonathan G.; Fennel, Katja

2018-02-01

Rivers deliver large amounts of fresh water, nutrients, and other terrestrially derived materials to the coastal ocean. Where inputs accumulate on the shelf, harmful effects such as hypoxia and eutrophication can result. In contrast, where export to the open ocean is efficient riverine inputs contribute to global biogeochemical budgets. Assessing the fate of riverine inputs is difficult on a global scale. Global ocean models are generally too coarse to resolve the relatively small scale features of river plumes. High-resolution regional models have been developed for individual river plume systems, but it is impractical to apply this approach globally to all rivers. Recently, generalized parameterizations have been proposed to estimate the export of riverine fresh water to the open ocean (Izett & Fennel, 2018, https://doi.org/10.1002/2017GB005667; Sharples et al., 2017, https://doi.org/10.1002/2016GB005483). Here the relationships of Izett and Fennel, https://doi.org/10.1002/2017GB005667 are used to derive global estimates of open-ocean export of fresh water and dissolved inorganic silicate, dissolved organic carbon, and dissolved organic and inorganic phosphorus and nitrogen. We estimate that only 15-53% of riverine fresh water reaches the open ocean directly in river plumes; nutrient export is even less efficient because of processing on continental shelves. Due to geographic differences in riverine nutrient delivery, dissolved silicate is the most efficiently exported to the open ocean (7-56.7%), while dissolved inorganic nitrogen is the least efficiently exported (2.8-44.3%). These results are consistent with previous estimates and provide a simple way to parameterize export to the open ocean in global models.

COLWRIT – Collaborative Online Writing in Google Docs

DEFF Research Database (Denmark)

Andreasen, Lars Birch; Winther, Frederikke; Hanghøj, Thorkild

2014-01-01

The poster presents preliminary hypotheses and findings of an on-going research project at Aalborg University, Denmark, which explores university students’ uses of collaborative writing tools like Google Docs when doing collaborative project work. The research project has a special focus on the v......The poster presents preliminary hypotheses and findings of an on-going research project at Aalborg University, Denmark, which explores university students’ uses of collaborative writing tools like Google Docs when doing collaborative project work. The research project has a special focus...... on the various effects on the collaboration process of students’ various usage of the commenting functions of online writing tools. The poster received the Best Poster Award at the conference....

48 CFR 1337.110-71 - Additional DOC clauses related to service contracting.

Science.gov (United States)

2010-10-01

... 48 Federal Acquisition Regulations System 5 2010-10-01 2010-10-01 false Additional DOC clauses related to service contracting. 1337.110-71 Section 1337.110-71 Federal Acquisition Regulations System....110-71 Additional DOC clauses related to service contracting. (a) Insert a clause substantially...

Modelling impacts of atmospheric deposition and temperature on long-term DOC trends

NARCIS (Netherlands)

Sawicka, Kasia; Rowe, E.C.; Evans, C.D.; Monteith, D.T.; Vanguelova, E.I.; Wade, A.J.; Clark, J.M.

2017-01-01

It is increasingly recognised that widespread and substantial increases in Dissolved organic carbon (DOC) concentrations in remote surface, and soil, waters in recent decades are linked to declining acid deposition. Effects of rising pH and declining ionic strength on DOC solubility have been

Process Inference from High Frequency Temporal Variations in Dissolved Organic Carbon (DOC) Dynamics Across Nested Spatial Scales

Science.gov (United States)

Tunaley, C.; Tetzlaff, D.; Lessels, J. S.; Soulsby, C.

2014-12-01

In order to understand aquatic ecosystem functioning it is critical to understand the processes that control the spatial and temporal variations in DOC. DOC concentrations are highly dynamic, however, our understanding at short, high frequency timescales is still limited. Optical sensors which act as a proxy for DOC provide the opportunity to investigate near-continuous DOC variations in order to understand the hydrological and biogeochemical processes that control concentrations at short temporal scales. Here we present inferred 15 minute stream water DOC data for a 12 month period at three nested scales (1km2, 3km2 and 31km2) for the Bruntland Burn, a headwater catchment in NE Scotland. High frequency data were measured using FDOM and CDOM probes which work by measuring the fluorescent component and coloured component, respectively, of DOC when exposed to ultraviolet light. Both FDOM and CDOM were strongly correlated (r2 >0.8) with DOC allowing high frequency estimations. Results show the close coupling of DOC with discharge throughout the sampling period at all three spatial scales. However, analysis at the event scale highlights anticlockwise hysteresis relationships between DOC and discharge due to the delay in DOC being flushed from the increasingly large areas of peaty soils as saturation zones expand and increase hydrological connectivity. Lag times vary between events dependent on antecedent conditions. During a 10 year drought period in late summer 2013 it was apparent that very small changes in discharge on a 15 minute timescale result in high increases in DOC. This suggests transport limitation during this period where DOC builds up in the soil and is not flushed regularly, therefore any subsequent increase in discharge results in large DOC peaks. The high frequency sensors also reveal diurnal variability during summer months related to the photo-oxidation, evaporative and biological influences of DOC during the day. This relationship is less

Natural diet of coral-excavating sponges consists mainly of dissolved organic carbon (DOC).

Science.gov (United States)

Mueller, Benjamin; de Goeij, Jasper M; Vermeij, Mark J A; Mulders, Yannick; van der Ent, Esther; Ribes, Marta; van Duyl, Fleur C

2014-01-01

Coral-excavating sponges are the most important bioeroders on Caribbean reefs and increase in abundance throughout the region. This increase is commonly attributed to a concomitant increase in food availability due to eutrophication and pollution. We therefore investigated the uptake of organic matter by the two coral-excavating sponges Siphonodictyon sp. and Cliona delitrix and tested whether they are capable of consuming dissolved organic carbon (DOC) as part of their diet. A device for simultaneous sampling of water inhaled and exhaled by the sponges was used to directly measure the removal of DOC and bacteria in situ. During a single passage through their filtration system 14% and 13% respectively of the total organic carbon (TOC) in the inhaled water was removed by the sponges. 82% (Siphonodictyon sp.; mean ± SD; 13 ± 17 μmol L(-1)) and 76% (C. delitrix; 10 ± 12 μmol L(-1)) of the carbon removed was taken up in form of DOC, whereas the remainder was taken up in the form of particulate organic carbon (POC; bacteria and phytoplankton) despite high bacteria retention efficiency (72 ± 15% and 87 ± 10%). Siphonodictyon sp. and C. delitrix removed DOC at a rate of 461 ± 773 and 354 ± 562 μmol C h(-1) respectively. Bacteria removal was 1.8 ± 0.9 × 10(10) and 1.7 ± 0.6 × 10(10) cells h(-1), which equals a carbon uptake of 46.0 ± 21.2 and 42.5 ± 14.0 μmol C h(-1) respectively. Therefore, DOC represents 83 and 81% of the TOC taken up by Siphonodictyon sp. and C. delitrix per hour. These findings suggest that similar to various reef sponges coral-excavating sponges also mainly rely on DOC to meet their carbon demand. We hypothesize that excavating sponges may also benefit from an increasing production of more labile algal-derived DOC (as compared to coral-derived DOC) on reefs as a result of the ongoing coral-algal phase shift.

Natural diet of coral-excavating sponges consists mainly of dissolved organic carbon (DOC.

Directory of Open Access Journals (Sweden)

Benjamin Mueller

Full Text Available Coral-excavating sponges are the most important bioeroders on Caribbean reefs and increase in abundance throughout the region. This increase is commonly attributed to a concomitant increase in food availability due to eutrophication and pollution. We therefore investigated the uptake of organic matter by the two coral-excavating sponges Siphonodictyon sp. and Cliona delitrix and tested whether they are capable of consuming dissolved organic carbon (DOC as part of their diet. A device for simultaneous sampling of water inhaled and exhaled by the sponges was used to directly measure the removal of DOC and bacteria in situ. During a single passage through their filtration system 14% and 13% respectively of the total organic carbon (TOC in the inhaled water was removed by the sponges. 82% (Siphonodictyon sp.; mean ± SD; 13 ± 17 μmol L(-1 and 76% (C. delitrix; 10 ± 12 μmol L(-1 of the carbon removed was taken up in form of DOC, whereas the remainder was taken up in the form of particulate organic carbon (POC; bacteria and phytoplankton despite high bacteria retention efficiency (72 ± 15% and 87 ± 10%. Siphonodictyon sp. and C. delitrix removed DOC at a rate of 461 ± 773 and 354 ± 562 μmol C h(-1 respectively. Bacteria removal was 1.8 ± 0.9 × 10(10 and 1.7 ± 0.6 × 10(10 cells h(-1, which equals a carbon uptake of 46.0 ± 21.2 and 42.5 ± 14.0 μmol C h(-1 respectively. Therefore, DOC represents 83 and 81% of the TOC taken up by Siphonodictyon sp. and C. delitrix per hour. These findings suggest that similar to various reef sponges coral-excavating sponges also mainly rely on DOC to meet their carbon demand. We hypothesize that excavating sponges may also benefit from an increasing production of more labile algal-derived DOC (as compared to coral-derived DOC on reefs as a result of the ongoing coral-algal phase shift.

The Intrinsically Disordered Domain of the Antitoxin Phd Chaperones the Toxin Doc against Irreversible Inactivation and Misfolding*

Science.gov (United States)

De Gieter, Steven; Konijnenberg, Albert; Talavera, Ariel; Butterer, Annika; Haesaerts, Sarah; De Greve, Henri; Sobott, Frank; Loris, Remy; Garcia-Pino, Abel

2014-01-01

The toxin Doc from the phd/doc toxin-antitoxin module targets the cellular translation machinery and is inhibited by its antitoxin partner Phd. Here we show that Phd also functions as a chaperone, keeping Doc in an active, correctly folded conformation. In the absence of Phd, Doc exists in a relatively expanded state that is prone to dimerization through domain swapping with its active site loop acting as hinge region. The domain-swapped dimer is not capable of arresting protein synthesis in vitro, whereas the Doc monomer is. Upon binding to Phd, Doc becomes more compact and is secured in its monomeric state with a neutralized active site. PMID:25326388

Functional validation of putative toxin-antitoxin genes from the Gram-positive pathogen Streptococcus pneumoniae: phd-doc is the fourth bona-fide operon.

Science.gov (United States)

Chan, Wai Ting; Yeo, Chew Chieng; Sadowy, Ewa; Espinosa, Manuel

2014-01-01

Bacterial toxin-antitoxin (TAs) loci usually consist of two genes organized as an operon, where their products are bound together and inert under normal conditions. However, under stressful circumstances the antitoxin, which is more labile, will be degraded more rapidly, thereby unleashing its cognate toxin to act on the cell. This, in turn, causes cell stasis or cell death, depending on the type of TAs and/or time of toxin exposure. Previously based on in silico analyses, we proposed that Streptococcus pneumoniae, a pathogenic Gram-positive bacterium, may harbor between 4 and 10 putative TA loci depending on the strains. Here we have chosen the pneumococcal strain Hungary(19A)-6 which contains all possible 10 TA loci. In addition to the three well-characterized operons, namely relBE2, yefM-yoeB, and pezAT, we show here the functionality of a fourth operon that encodes the pneumococcal equivalent of the phd-doc TA. Transcriptional fusions with gene encoding Green Fluorescent Protein showed that the promoter was slightly repressed by the Phd antitoxin, and exhibited almost background values when both Phd-Doc were expressed together. These findings demonstrate that phd-doc shows the negative self-regulatory features typical for an authentic TA. Further, we also show that the previously proposed TAs XreA-Ant and Bro-XreB, although they exhibit a genetic organization resembling those of typical TAs, did not appear to confer a functional behavior corresponding to bona fide TAs. In addition, we have also discovered new interesting bioinformatics results for the known pneumococcal TAs RelBE2 and PezAT. A global analysis of the four identified toxins-antitoxins in the pneumococcal genomes (PezAT, RelBE2, YefM-YoeB, and Phd-Doc) showed that RelBE2 and Phd-Doc are the most conserved ones. Further, there was good correlation among TA types, clonal complexes and sequence types in the 48 pneumococcal strains analyzed.

ToxicDocs (www.ToxicDocs.org): from history buried in stacks of paper to open, searchable archives online.

Science.gov (United States)

Rosner, David; Markowitz, Gerald; Chowkwanyun, Merlin

2018-02-01

As a result of a legal mechanism called discovery, the authors accumulated millions of internal corporate and trade association documents related to the introduction of new products and chemicals into workplaces and commerce. What did these private entities discuss among themselves and with their experts? The plethora of documents, both a blessing and a curse, opened new sources and interesting questions about corporate and regulatory histories. But they also posed an almost insurmountable challenge to historians. Thus emerged ToxicDocs, possible only with a technological innovation known as "Big Data." That refers to the sheer volume of new digital data and to the computational power to analyze them. Users will be able to identify what firms knew (or did not know) about the dangers of toxic substances in their products-and when. The database opens many areas to inquiry including environmental studies, business history, government regulation, and public policy. ToxicDocs will remain a resource free and open to all, anywhere in the world.

Portfolio optimisation for hydropower producers that balances riverine ecosystem protection and producer needs

Science.gov (United States)

Yin, X. A.; Yang, Z. F.; Liu, C. L.

2014-04-01

In deregulated electricity markets, hydropower portfolio design has become an essential task for producers. The previous research on hydropower portfolio optimisation focused mainly on the maximisation of profits but did not take into account riverine ecosystem protection. Although profit maximisation is the major objective for producers in deregulated markets, protection of riverine ecosystems must be incorporated into the process of hydropower portfolio optimisation, especially against a background of increasing attention to environmental protection and stronger opposition to hydropower generation. This research seeks mainly to remind hydropower producers of the requirement of river protection when they design portfolios and help shift portfolio optimisation from economically oriented to ecologically friendly. We establish a framework to determine the optimal portfolio for a hydropower reservoir, accounting for both economic benefits and ecological needs. In this framework, the degree of natural flow regime alteration is adopted as a constraint on hydropower generation to protect riverine ecosystems, and the maximisation of mean annual revenue is set as the optimisation objective. The electricity volumes assigned in different electricity submarkets are optimised by the noisy genetic algorithm. The proposed framework is applied to China's Wangkuai Reservoir to test its effectiveness. The results show that the new framework could help to design eco-friendly portfolios that can ensure a planned profit and reduce alteration of the natural flow regime.

[Estimation of DOC concentrations using CDOM absorption coefficients: a case study in Taihu Lake].

Science.gov (United States)

Jiang, Guang-Jia; Ma, Rong-Hua; Duan, Hong-Tao

2012-07-01

Dissolved organic carbon (DOC) is the largest organic carbon stock in water ecosystems, which plays an important role in the carbon cycle in water. Chromophoric dissolved organic matter (CDOM), an important water color variation, is the colored fraction of DOC and its absorption controls the instruction of light under water. The available linkage between DOC concentration and CDOM absorptions enables the determination of DOC accumulations using remote sensing reflectance or radiance in lake waters. The present study explored the multi-liner relationship between CDOM absorptions [a(g) (250) and a(g) (365)] and DOC concentrations in Taihu Lake, based on the available data in 4 cruises (201005, 201101, 201103, 201105) (totally 183 sampling sites). Meanwhile, the results were validated with the data of the experiment carried out from August 29 to September 2, 2011 in Taihu Lake (n = 27). Furthermore, a universal pattern of modeling from remote sensing was built for lake waters. The results demonstrated that this method provided more satisfying estimation of DOC concentrations in Taihu Lake. Except the data obtained in January 2011, the fitted results of which were not conductive to the winter dataset (201101) in Taihu Lake, due to the diverse sources and sinks of DOC and CDOM, the multi-liner relationship was robust for the data collected in the other three cruises (R2 = 0.64, RMSE = 14.31%, n = 164), which was validated using the 201108 sampling dataset (R2 = 0.67, RMSE = 10.58%, n = 27). In addition, the form of the statistic model is universal, to some extent, for other water areas, however, there is difference in the modeling coefficients. Further research should be focused on the parameterization using local data from different lakes, which provides effective methodology for the estimation of DOC concentrations in lakes and other water regions.

Urban Water and Riverine Quality: Participatory Science in Singapore

Science.gov (United States)

Higgitt, D. L.

2011-12-01

Singapore is a highly urbanised environment experiencing tropical monsoon hydrological regimes. A heavily engineered fluvial system has been developed over time to provide efficient drainage and reduce the area subject to flood risk. However, recent interest in ecosystem-based approaches to river management and the enhancement of the aesthetic and ecological 'quality' of riverine landscape, coupled with concerns about climate change, has challenged the prevailing engineering view. This is reflected in the Public Utility Board (PUB) ABC Waters Programme, which also seeks to develop community interest in riverine environments and engagement with water-related concerns. As part of a programme developing participatory GIS (PGIS) with school and university students, we have undertaken applications involving participant observation, reporting and analysis of water quality data and habitat quality based on a simplified version of the UK Environment Agency's River Habitat Survey. From an educational perspective, there is evidence that these PGIS initiatives raise environmental awareness and enhance geospatial thinking, particularly in relation to catchment management concepts. The extent to which participant-derived data can contribute to a citizen science of urban water quality and hence deliver some aspects of the community engagement sought after by the authorities, is a topic of debate.

Science for Managing Riverine Ecosystems: Actions for the USGS Identified in the Workshop "Analysis of Flow and Habitat for Instream Aquatic Communities"

Science.gov (United States)

Bencala, Kenneth E.; Hamilton, David B.; Petersen, James H.

2006-01-01

Federal and state agencies need improved scientific analysis to support riverine ecosystem management. The ability of the USGS to integrate geologic, hydrologic, chemical, geographic, and biological data into new tools and models provides unparalleled opportunities to translate the best riverine science into useful approaches and usable information to address issues faced by river managers. In addition to this capability to provide integrated science, the USGS has a long history of providing long-term and nationwide information about natural resources. The USGS is now in a position to advance its ability to provide the scientific support for the management of riverine ecosystems. To address this need, the USGS held a listening session in Fort Collins, Colorado in April 2006. Goals of the workshop were to: 1) learn about the key resource issues facing DOI, other Federal, and state resource management agencies; 2) discuss new approaches and information needs for addressing these issues; and 3) outline a strategy for the USGS role in supporting riverine ecosystem management. Workshop discussions focused on key components of a USGS strategy: Communications, Synthesis, and Research. The workshop identified 3 priority actions the USGS can initiate now to advance its capabilities to support integrated science for resource managers in partner government agencies and non-governmental organizations: 1) Synthesize the existing science of riverine ecosystem processes to produce broadly applicable conceptual models, 2) Enhance selected ongoing instream flow projects with complementary interdisciplinary studies, and 3) Design a long-term, watershed-scale research program that will substantively reinvent riverine ecosystem science. In addition, topical discussion groups on hydrology, geomorphology, aquatic habitat and populations, and socio-economic analysis and negotiation identified eleven important complementary actions required to advance the state of the science and to

Implementing Gmail Docs and Blogs for Enhancing Motivation towards Writing in English

Science.gov (United States)

Gomez Zapata, Julian Esteban

2010-01-01

This action research paper dealt with how to increase motivation towards writing in English through blogs and Gmail docs in a private school in Medellín, Colombia. It was necessary to explore the concepts of "social interaction," "motivation" and "reasons for writing" to understand how blogs and Gmail docs favored…

Drainage in Shallow Peatlands of Marginal Upland Landscapes: DOC Losses from High Flow Events

Science.gov (United States)

Grand-Clement, E.; Anderson, K.; Luscombe, D.; Gatis, N.; Benaud, P.; Brazier, R.

2013-12-01

Peatlands are widely represented in northern Europe, especially in the UK. In the South West of England (i.e. Exmoor, Dartmoor and Bodmin moors), climate change puts their existence under threat: according to recent modelling work, marginal peatlands are highly vulnerable to future temperature and precipitation change and are likely to be the first to disappear from as early as 2050. Additionally, peat cutting and intensive drainage for agricultural reclamation in the 19th and 20th century, have modified the hydrological behaviour of these shallow peatlands and dried out the upper layers, causing oxidation, erosion and vegetation change. Such anthropogenic interventions directly impact on the storage of carbon, but also the provision of other ecosystem services, such as the supply of drinking water, and the support of specific and rare habitats. Large restoration programs involving the blocking of drainage ditches are currently under way throughout the UK but, to date, little is known about the consequences of such management approaches on overall Carbon stocks, and whether the restoration can revert ecosystems back to a state similar to that of undisturbed peatlands. In this context, Exmoor is particularly vulnerable due to its location at the southernmost margin of the UK peatlands' geographical extent, and its dense network of drainage ditches putting pressure on already very shallow peat resources. We hypothesise that monitoring of these peatlands may provide an ';early warning system' for climatic impacts that could affect more northerly sites in years to come, as climates change more significantly. The aim of this study is to look at the current impact of peatland degradation on water quality on Exmoor during rainfall-runoff events. Our experimental approach employs detailed, high resolution monitoring of selected ditches that are representative of damaged conditions on Exmoor, from small- (30 x 30cm ditches) through medium- (50x50cm), large- (1-2m ditches

Land-based salmon aquacultures change the quality and bacterial degradation of riverine dissolved organic matter

DEFF Research Database (Denmark)

Kamjunke, Norbert; Nimptsch, Jorge; Harir, Mourad

2017-01-01

characterization of aquaculture DOM quality and its bacterial degradation using four salmon aquacultures in Chile. Fluorescence measurements, ultrahigh-resolution mass spectrometry, and nuclear magnetic resonance spectroscopy of the DOM revealed specific and extensive molecular alterations caused by aquacultures...

AI techniques for optimizing multi-objective reservoir operation upon human and riverine ecosystem demands

Science.gov (United States)

Tsai, Wen-Ping; Chang, Fi-John; Chang, Li-Chiu; Herricks, Edwin E.

2015-11-01

Flow regime is the key driver of the riverine ecology. This study proposes a novel hybrid methodology based on artificial intelligence (AI) techniques for quantifying riverine ecosystems requirements and delivering suitable flow regimes that sustain river and floodplain ecology through optimizing reservoir operation. This approach addresses issues to better fit riverine ecosystem requirements with existing human demands. We first explored and characterized the relationship between flow regimes and fish communities through a hybrid artificial neural network (ANN). Then the non-dominated sorting genetic algorithm II (NSGA-II) was established for river flow management over the Shihmen Reservoir in northern Taiwan. The ecosystem requirement took the form of maximizing fish diversity, which could be estimated by the hybrid ANN. The human requirement was to provide a higher satisfaction degree of water supply. The results demonstrated that the proposed methodology could offer a number of diversified alternative strategies for reservoir operation and improve reservoir operational strategies producing downstream flows that could meet both human and ecosystem needs. Applications that make this methodology attractive to water resources managers benefit from the wide spread of Pareto-front (optimal) solutions allowing decision makers to easily determine the best compromise through the trade-off between reservoir operational strategies for human and ecosystem needs.

System requirements and design description for the document basis database interface (DocBasis)

International Nuclear Information System (INIS)

Lehman, W.J.

1997-01-01

This document describes system requirements and the design description for the Document Basis Database Interface (DocBasis). The DocBasis application is used to manage procedures used within the tank farms. The application maintains information in a small database to track the document basis for a procedure, as well as the current version/modification level and the basis for the procedure. The basis for each procedure is substantiated by Administrative, Technical, Procedural, and Regulatory requirements. The DocBasis user interface was developed by Science Applications International Corporation (SAIC)

Radiocarbon in marine dissolved organic carbon (DOC)

NARCIS (Netherlands)

Clercq, M. le; Plicht, J. van der; Meijer, H.A.J.; Baar, H.J.W. de

Dissolved Organic Carbon (DOC) plays an important role in the ecology and carbon cycle in the ocean. Analytical problems with concentration and isotope ratio measurements have hindered its study. We have constructed a new analytical method based on supercritical oxidation for the determination of

A modification of the Regional Nutrient Management model (ReNuMa) to identify long-term changes in riverine nitrogen sources

Science.gov (United States)

Hu, Minpeng; Liu, Yanmei; Wang, Jiahui; Dahlgren, Randy A.; Chen, Dingjiang

2018-06-01

Source apportionment is critical for guiding development of efficient watershed nitrogen (N) pollution control measures. The ReNuMa (Regional Nutrient Management) model, a semi-empirical, semi-process-oriented model with modest data requirements, has been widely used for riverine N source apportionment. However, the ReNuMa model contains limitations for addressing long-term N dynamics by ignoring temporal changes in atmospheric N deposition rates and N-leaching lag effects. This work modified the ReNuMa model by revising the source code to allow yearly changes in atmospheric N deposition and incorporation of N-leaching lag effects into N transport processes. The appropriate N-leaching lag time was determined from cross-correlation analysis between annual watershed individual N source inputs and riverine N export. Accuracy of the modified ReNuMa model was demonstrated through analysis of a 31-year water quality record (1980-2010) from the Yongan watershed in eastern China. The revisions considerably improved the accuracy (Nash-Sutcliff coefficient increased by ∼0.2) of the modified ReNuMa model for predicting riverine N loads. The modified model explicitly identified annual and seasonal changes in contributions of various N sources (i.e., point vs. nonpoint source, surface runoff vs. groundwater) to riverine N loads as well as the fate of watershed anthropogenic N inputs. Model results were consistent with previously modeled or observed lag time length as well as changes in riverine chloride and nitrate concentrations during the low-flow regime and available N levels in agricultural soils of this watershed. The modified ReNuMa model is applicable for addressing long-term changes in riverine N sources, providing decision-makers with critical information for guiding watershed N pollution control strategies.

A Novel Source of DOC and DON to Watershed Soils

Science.gov (United States)

Aitkenhead-Peterson, J. A.

2017-12-01

A source of dissolved organic carbon (DOC) and nitrogen (DON) to soils and groundwater is that emanating from decomposing mammals. Although there is an increase in human donor facilities (body farms) in the USA and in mass mortality events (MME) worldwide, this injection of DOC and DON into watershed soils has received little attention. Studies at two human donor facilities in Texas, USA have revealed that the purge fluid associated with decomposition is extremely high in DOC and DON and migrates down the soil profile. Two studies were carried out 1) The southeast Texas Applied Forensic Science (STAFS) facility on an Alfisol with a saturated hydraulic conductivity of 331 mm hr-1 and 83% sand and 2) the Forensic Anthropology Research Facility (FARF) on Mollisols with a saturated hydraulic conductivity of 3.6-9.7 mm hr-1 and 28-33% sand. The numbers of days since donors were laid in the environment ranged from 219-680 d at STAFS and 306-960 d at FACTS. Purge can occur between 5 and 30 d dependent on the time of year the body is placed and the resultant phenomenon is termed cadaver decomposition island (CDI). Soil cores were taken at 5 cm increments to a depth of 30 cm in the sandy soil and 15 cm in the clayey/rocky soil. In the sandy soils, DOC concentrations were significantly higher in all the CDI soils when compared to control soils at depths of 15, 20, 25 and 30 cm and ranged from 121.7 µg g-1 (30 cm) to 167.6 µg g-1 (15 cm) in control soils and 461.9 µg g-1 (30 cm) to 660.4 µg g-1 (15 cm) in CDI soils, representing a three- to four-fold increase in DOC relative to control soils. DON in all CDI soils was not significantly higher than control soils until 30 cm depth and ranged from 9.9-32.3 µg g-1 in CDI soils and 121.7 µg g-1 in control soil, representing a two- to seven-fold increase in DON relative to control soils. DOC concentrations in control soils at the FARF site at 15 cm ranged 215-365 µg g-1 while in the CDI soils DOC was higher (range: 270

G-DOC: A Systems Medicine Platform for Personalized Oncology

Directory of Open Access Journals (Sweden)

Subha Madhavan

2011-09-01

Full Text Available Currently, cancer therapy remains limited by a “one-size-fits-all” approach, whereby treatment decisions are based mainly on the clinical stage of disease, yet fail to reference the individual's underlying biology and its role driving malignancy. Identifying better personalized therapies for cancer treatment is hindered by the lack of high-quality “omics” data of sufficient size to produce meaningful results and the ability to integrate biomedical data from disparate technologies. Resolving these issues will help translation of therapies from research to clinic by helping clinicians develop patient-specific treatments based on the unique signatures of patient's tumor. Here we describe the Georgetown Database of Cancer (G-DOC, a Web platform that enables basic and clinical research by integrating patient characteristics and clinical outcome data with a variety of high-throughput research data in a unified environment. While several rich data repositories for high-dimensional research data exist in the public domain, most focus on a single-data type and do not support integration across multiple technologies. Currently, G-DOC contains data from more than 2500 breast cancer patients and 800 gastrointestinal cancer patients, G-DOC includes a broad collection of bioinformatics and systems biology tools for analysis and visualization of four major “omics” types: DNA, mRNA, microRNA, and metabolites. We believe that G-DOC will help facilitate systems medicine by providing identification of trends and patterns in integrated data sets and hence facilitate the use of better targeted therapies for cancer. A set of representative usage scenarios is provided to highlight the technical capabilities of this resource.

Forest Fragmentation in the Lower Amazon Floodplain: Implications for Biodiversity and Ecosystem Service Provision to Riverine Populations

Directory of Open Access Journals (Sweden)

Vivian Renó

2016-10-01

Full Text Available This article analyzes the process of forest fragmentation of a floodplain landscape of the Lower Amazon over a 30-year period and its implications for the biodiversity and the provision of ecosystem services to the riverine population. To this end, we created a multi-temporal forest cover map based on Landsat images, and then analyzed the fragmentation dynamics through landscape metrics. From the analyses of the landscape and bibliographic information, we made inferences regarding the potential impacts of fragmentation on the biodiversity of trees, birds, mammals and insects. Subsequently, we used data on the local populations’ environmental perception to assess whether the inferred impacts on biodiversity are perceived by these populations and whether the ecosystem services related to the biodiversity of the addressed groups are compromised. The results show a 70% reduction of the forest habitat as well as important changes in the landscape structure that constitute a high degree of forest fragmentation. The perceived landscape alterations indicate that there is great potential for compromise of the biodiversity of trees, birds, mammals and insects. The field interviews corroborate the inferred impacts on biodiversity and indicate that the ecosystem services of the local communities have been compromised. More than 95% of the communities report a decreased variety and/or abundance of animal and plant species, 46% report a decrease in agricultural productivity, and 19% confirm a higher incidence of pests during the last 30 years. The present study provides evidence of an accelerated process of degradation of the floodplain forests of the Lower Amazon and indicate substantial compromise of the ecosystem services provision to the riverine population in recent decades, including reductions of food resources (animals and plants, fire wood, raw material and medicine, as well as lower agricultural productivity due to probable lack of pollination

The epidemiology of malaria in Rondonia (Western Amazon region, Brazil): study of a riverine population.

Science.gov (United States)

Camargo, L M; Noronha, E; Salcedo, J M; Dutra, A P; Krieger, H; Pereira da Silva, L H; Camargo, E P

1999-01-15

We report on a longitudinal study concerning the incidence of malaria in a riverine population (Portuchuelo) settled on the riverbanks of Rio Madeira, in the State of Rondonia, Brazil. We found the incidence of malaria to be seasonal, prevailing in the dry months of June and July. The Annual Parasite Index (API) was 292/1000 inhabitants, almost three times that of the state of Rondonia for the same period. In contrast with other studied Rondonian populations, malaria in Portuchuelo was more prevalent in youngsters Amazon region where most of its members were born. Due to the permanent presence of malaria among riverine populations, we are proposing that they may act as perennial reserves of malaria and, therefore, as sources of infection for migrants or eventual settlers at their vicinity. To date, the opposite view has been generally held. Anopheles darlingi, the main vector species in the area, is essentially sylvatic, which contributes to make the control of malaria highly problematic. The only hopes for control rest on permanent surveillance and the prompt treatment of patients, which are also problematic considering the vastness of the Amazon region and the remoteness of some of its riverine settlements.

The intrinsically disordered domain of the antitoxin Phd chaperones the toxin Doc against irreversible inactivation and misfolding.

Science.gov (United States)

De Gieter, Steven; Konijnenberg, Albert; Talavera, Ariel; Butterer, Annika; Haesaerts, Sarah; De Greve, Henri; Sobott, Frank; Loris, Remy; Garcia-Pino, Abel

2014-12-05

The toxin Doc from the phd/doc toxin-antitoxin module targets the cellular translation machinery and is inhibited by its antitoxin partner Phd. Here we show that Phd also functions as a chaperone, keeping Doc in an active, correctly folded conformation. In the absence of Phd, Doc exists in a relatively expanded state that is prone to dimerization through domain swapping with its active site loop acting as hinge region. The domain-swapped dimer is not capable of arresting protein synthesis in vitro, whereas the Doc monomer is. Upon binding to Phd, Doc becomes more compact and is secured in its monomeric state with a neutralized active site. © 2014 by The American Society for Biochemistry and Molecular Biology, Inc.

Phylogeography and sex-biased dispersal across riverine manatee populations (Trichechus inunguis and Trichechus manatus) in South America.

Science.gov (United States)

Satizábal, Paula; Mignucci-Giannoni, Antonio A; Duchêne, Sebastián; Caicedo-Herrera, Dalila; Perea-Sicchar, Carlos M; García-Dávila, Carmen R; Trujillo, Fernando; Caballero, Susana J

2012-01-01

Phylogeographic patterns and sex-biased dispersal were studied in riverine populations of West Indian (Trichechus manatus) and Amazonian manatees (T. inunguis) in South America, using 410bp D-loop (Control Region, Mitochondrial DNA) sequences and 15 nuclear microsatellite loci. This multi-locus approach was key to disentangle complex patterns of gene flow among populations. D-loop analyses revealed population structuring among all Colombian rivers for T. manatus, while microsatellite data suggested no structure. Two main populations of T. inunguis separating the Colombian and Peruvian Amazon were supported by analysis of the D-loop and microsatellite data. Overall, we provide molecular evidence for differences in dispersal patterns between sexes, demonstrating male-biased gene flow dispersal in riverine manatees. These results are in contrast with previously reported levels of population structure shown by microsatellite data in marine manatee populations, revealing low habitat restrictions to gene flow in riverine habitats, and more significant dispersal limitations for males in marine environments.

Phylogeography and sex-biased dispersal across riverine manatee populations (Trichechus inunguis and Trichechus manatus in South America.

Directory of Open Access Journals (Sweden)

Paula Satizábal

Full Text Available Phylogeographic patterns and sex-biased dispersal were studied in riverine populations of West Indian (Trichechus manatus and Amazonian manatees (T. inunguis in South America, using 410bp D-loop (Control Region, Mitochondrial DNA sequences and 15 nuclear microsatellite loci. This multi-locus approach was key to disentangle complex patterns of gene flow among populations. D-loop analyses revealed population structuring among all Colombian rivers for T. manatus, while microsatellite data suggested no structure. Two main populations of T. inunguis separating the Colombian and Peruvian Amazon were supported by analysis of the D-loop and microsatellite data. Overall, we provide molecular evidence for differences in dispersal patterns between sexes, demonstrating male-biased gene flow dispersal in riverine manatees. These results are in contrast with previously reported levels of population structure shown by microsatellite data in marine manatee populations, revealing low habitat restrictions to gene flow in riverine habitats, and more significant dispersal limitations for males in marine environments.

75 FR 16748 - Final Voluntary Product Standard; DOC PS 20-10 “American Softwood Lumber Standard”

Science.gov (United States)

2010-04-02

...-0146-02] Final Voluntary Product Standard; DOC PS 20-10 ``American Softwood Lumber Standard'' AGENCY... of Standards and Technology (NIST) announces voluntary product standard DOC PS 20-10 ``American Softwood Lumber Standard'' which will supersede DOC PS 20-05. The Standard establishes standard sizes and...

Riverine inputs of polybrominated diphenyl ethers from the Pearl River Delta (China) to the coastal ocean.

Science.gov (United States)

Guan, Yu-Feng; Wang, Ji-Zhong; Ni, Hong-Gang; Luo, Xiao-Jun; Mai, Bi-Xian; Zeng, Eddy Y

2007-09-01

Riverine runoff is an important mode to transport anthropogenic pollutants from terrestrial sources to oceans. Polybrominated diphenyl ethers (PBDEs) were measured in riverine runoff samples from the eight major outlets within the Pearl River Delta (PRD), China, an economically fast developing region housing a vast number of electronics manufacturing and assembling plants. The sigma 17PBDEs (sum of 17 BDE congeners, i.e., BDE-28, -47, -66, -85, -99, -100, -138, -153, -154, -183, -196, -197, -203, -206, -207, -208, and -209) concentrations varied from 344 to 68,000 pg/L, with those of BDE-209, BDE-47, and BDE-99 being 335-65200, 3-143, and production of brominated fire retardants (approximately 10000 metric tons/year) and the annual riverine input of total PBDEs from the PRD, suggesting that the majority of PBDEs inventory has been accumulated from importation of e-wastes. Because of the continuous importation of e-wastes and strong demand for brominated fire retardants, the impact of PBDEs on China's and the world's environments is expected to persist for many years to come.

DOC concentrations across a depth-dependent light gradient on a Caribbean coral reef

NARCIS (Netherlands)

Mueller, Benjamin; Meesters, Erik H.; Duyl, Van Fleur C.

2017-01-01

Photosynthates released by benthic primary producers (BPP), such as reef algae and scleractinian corals, fuel the dissolved organic carbon (DOC) production on tropical coral reefs. DOC concentrations near BPP have repeatedly been observed to be elevated compared to those in the surrounding water

Function analysis of 5'-UTR of the cellulosomal xyl-doc cluster in Clostridium papyrosolvens.

Science.gov (United States)

Zou, Xia; Ren, Zhenxing; Wang, Na; Cheng, Yin; Jiang, Yuanyuan; Wang, Yan; Xu, Chenggang

2018-01-01

Anaerobic, mesophilic, and cellulolytic Clostridium papyrosolvens produces an efficient cellulolytic extracellular complex named cellulosome that hydrolyzes plant cell wall polysaccharides into simple sugars. Its genome harbors two long cellulosomal clusters: cip - cel operon encoding major cellulosome components (including scaffolding) and xyl - doc gene cluster encoding hemicellulases. Compared with works on cip - cel operon, there are much fewer studies on xyl - doc mainly due to its rare location in cellulolytic clostridia. Sequence analysis of xyl - doc revealed that it harbors a 5' untranslated region (5'-UTR) which potentially plays a role in the regulation of downstream gene expression. Here, we analyzed the function of 5'-UTR of xyl - doc cluster in C. papyrosolvens in vivo via transformation technology developed in this study. In this study, we firstly developed an electrotransformation method for C. papyrosolvens DSM 2782 before the analysis of 5'-UTR of xyl - doc cluster. In the optimized condition, a field with an intensity of 7.5-9.0 kV/cm was applied to a cuvette (0.2 cm gap) containing a mixture of plasmid and late cell suspended in exponential phase to form a 5 ms pulse in a sucrose-containing buffer. Afterwards, the putative promoter and the 5'-UTR of xyl - doc cluster were determined by sequence alignment. It is indicated that xyl - doc possesses a long conservative 5'-UTR with a complex secondary structure encompassing at least two perfect stem-loops which are potential candidates for controlling the transcriptional termination. In the last step, we employed an oxygen-independent flavin-based fluorescent protein (FbFP) as a quantitative reporter to analyze promoter activity and 5'-UTR function in vivo. It revealed that 5'-UTR significantly blocked transcription of downstream genes, but corn stover can relieve its suppression. In the present study, our results demonstrated that 5'-UTR of the cellulosomal xyl - doc cluster blocks the

A systematic examination of the relationship between CDOM and DOC for various inland waters across China

OpenAIRE

Song, Kaishan; Zhao, Ying; Wen, Zhidan; Ma, Jianhang; Shao, Tiantian; Fang, Chong; Shang, Yingxin

2016-01-01

Chromophoric dissolved organic matter (CDOM) plays a vital role in aquatic ecosystems. Strong relationship has been proven between CDOM and dissolved organic carbon (DOC), which set the basis for remote estimation of DOC with remote sensing data. An algorithm has been developed to retrieve DOC via CDOM absorption at 275 and 295 nm with coastal waters. However, the relationship between DOC and aCDOM(275) and aCDOM(295) for different types of inland waters are still not clear. Further, i...

Photo-fenton degradation of diclofenac: identification of main intermediates and degradation pathway.

Science.gov (United States)

Pérez-Estrada, Leónidas A; Malato, Sixto; Gernjak, Wolfgang; Agüera, Ana; Thurman, E Michael; Ferrer, Imma; Fernández-Alba, Amadeo R

2005-11-01

In recent years, the presence of pharmaceuticals in the aquatic environment has been of growing interest. These new contaminants are important because many of them are not degraded under the typical biological treatments applied in the wastewater treatment plants and represent a continuous input into the environment. Thus, compounds such as diclofenac are present in surface waters in all Europe and a crucial need for more enhanced technologies that can reduce its presence in the environment has become evident. In this sense, advanced oxidation processes (AOPs) represent a good choice for the treatment of hazardous nonbiodegradable pollutants. This work deals with the solar photodegradation of diclofenac, an antiinflammatory drug, in aqueous solutions by photo-Fenton reaction. A pilot-scale facility using a compound parabolic collector (CPC) reactor was used for this study. Results obtained show rapid and complete oxidation of diclofenac after 60 min, and total mineralization (disappearance of dissolved organic carbon, DOC) after 100 min of exposure to sunlight. Although diclofenac precipitates during the process at low pH, its degradation takes place in the homogeneous phase governed by a precipitation-redissolution-degradation process. Establishment of the reaction pathway was made possible by a thorough analysis of the reaction mixture identifying the main intermediate products generated. Gas chromatography-mass spectrometry (GC/ MS) and liquid chromatography coupled with time-of-flight mass spectrometry (LC/TOF-MS) were used to identify 18 intermediates, in two tentative degradation routes. The main one was based on the initial hydroxylation of the phenylacetic acid moiety in the C-4 position and subsequent formation of a quinone imine derivative that was the starting point for further multistep degradation involving hydroxylation, decarboxylation, and oxidation reactions. An alternative route was based on the transient preservation of the biphenyl amino moiety

Effect of light and nutrient availability on the release of dissolved organic carbon (DOC) by Caribbean turf algae.

Science.gov (United States)

Mueller, Benjamin; den Haan, Joost; Visser, Petra M; Vermeij, Mark J A; van Duyl, Fleur C

2016-03-22

Turf algae increasingly dominate benthic communities on coral reefs. Given their abundance and high dissolved organic carbon (DOC) release rates, turf algae are considered important contributors to the DOC pool on modern reefs. The release of photosynthetically fixed carbon as DOC generally, but not always, increases with increased light availability. Nutrient availability was proposed as an additional factor to explain these conflicting observations. To address this proposed but untested hypothesis, we documented the interactive contributions of light and nutrient availability on the release of DOC by turf algae. DOC release rates and oxygen production were quantified in incubation experiments at two light levels (full and reduced light) and two nutrient treatments (natural seawater and enriched seawater). In natural seawater, DOC release at full light was four times higher than at reduced light. When nutrients were added, DOC release rates at both light levels were similar to the natural seawater treatment at full light. Our results therefore show that low light in combination with low nutrient availability reduces the release of DOC by turf algae and that light and nutrient availability interactively determine DOC release rates by this important component of Caribbean reef communities.

Export of dissolved carbonaceous and nitrogenous substances in rivers of the "Water Tower of Asia".

Science.gov (United States)

Qu, Bin; Sillanpää, Mika; Kang, Shichang; Yan, Fangping; Li, Zhiguo; Zhang, Hongbo; Li, Chaoliu

2018-03-01

Rivers are critical links in the carbon and nitrogen cycle in aquatic, terrestrial, and atmospheric environments. Here riverine carbon and nitrogen exports in nine large rivers on the Tibetan Plateau - the "Water Tower of Asia" - were investigated in the monsoon season from 2013 to 2015. Compared with the world average, concentrations of dissolved inorganic carbon (DIC, 30.7mg/L) were high in river basins of the plateau due to extensive topographic relief and intensive water erosion. Low concentrations of dissolved organic carbon (DOC, 1.16mg/L) were likely due to the low temperature and unproductive land vegetation environments. Average concentrations of riverine DIN (0.32mg/L) and DON (0.35 mg/L) on the Tibetan Plateau were close to the world average. However, despite its predominantly pristine environment, discharge from agricultural activities and urban areas of the plateau has raised riverine N export. In addition, DOC/DON ratio (C/N, ~6.5) in rivers of the Tibetan Plateau was much lower than the global average, indicating that dissolved organic carbon in the rivers of this region might be more bioavailable. Therefore, along with global warming and anthropogenic activities, increasing export of bioavailable riverine carbon and nitrogen from rivers of the Tibetan Plateau can be expected in the future, which will possibly influence the regional carbon and nitrogen cycle. Copyright © 2017. Published by Elsevier B.V.

78 FR 35093 - Requested Administrative Waiver of the Coastwise Trade Laws: Vessel EYE DOC; Invitation for...

Science.gov (United States)

2013-06-11

... Administrative Waiver of the Coastwise Trade Laws: Vessel EYE DOC; Invitation for Public Comments AGENCY... DOC is: INTENDED COMMERCIAL USE OF VESSEL: ``Charter fishing on Lake Erie'' GEOGRAPHIC REGION: ``Ohio..., Maritime Administration. [FR Doc. 2013-13836 Filed 6-10-13; 8:45 am] BILLING CODE 4910-81-P ...

Plant diversity induces a shift of DOC concentration over time - results from long term and large scale experiment

Science.gov (United States)

Lange, Markus; Gleixner, Gerd

2016-04-01

Plant diversity has been demonstrated as a crucial factor for soil organic carbon (SOC) storage. The horizontal SOC formation in turn is strongly impacted by the relative small but consistent flow of dissolved organic carbon (DOC) in soils. In this process, pore water leaches plant material and already stored SOC while simultaneously these leachates are transported downwards. However, there is a big uncertainty about the drivers of DOC flux; in particular about the importance of biological processes. We investigated the impact of plant diversity and other biotic drivers on DOC concentrations and total DOC fluxes (concentration × sampled water amount). In addition, we considered abiotic factors such as weather and soil conditions to assess the relative importance of biotic and abiotic drivers and how their importance changes over time. We used a comprehensive data set, gathered in the frame of the long-term biodiversity experiment "The Jena Experiment". Permanent monitoring started directly after establishment of the field site in 2002 and is still running. This enabled us to trace the impact of plant communities with their increasing establishment over the time on DOC concentration. We found the amount of sampled pore water best explained by rainfall, while it was not related to plant associated variables. Directly after establishing the experimental site, DOC concentrations were highest and then decreasing with time. In the first period of the experiment plant diversity had no or even a slightly negative impact on DOC concentrations. The direction of the plant diversity effect on DOC concentrations changed over time; namely in later phases we observed highest DOC concentrations on plots with high plant diversity. Moreover, DOC concentrations were negatively affected by increased amounts of sampled pore water indicating a dilution effect. Even though this impact was highly significant; its effect size was even less pronounced at later time points. In summary

CARABID BEATLES AS INDICATORS REFLECTING RIVERINE ENVIRONMENTAL CONDITIONS IN DIFFERENT TYPES OF RIVER REGULATIONS

Directory of Open Access Journals (Sweden)

Renata Kędzior

2014-10-01

Full Text Available The aim of the investigation was to estimate factors responsible for sustaining riverine communities in stream sections with various bank regulation systems. The research were conducted on Porebianka stream in the Polish Western Carpathians, where 10 different types of river regulations were chosen for the analysis (strong incision without alluvial deposits, redeposition with sand and gravel banks, concrete revetment walls along the banks, channel with banks lined with rip-rap and reference unmanaged cross- section. We conclude that the carabid beetles assemblages of the studied river sections respond mainly to hydraulic parameters of the stream. Elimination of frequent natural bank inundation (due to the regulations of the banks is the main factor responsible for the impoverishment and extinction of riverine communities.

ECOLOGICAL TRANSFORMATIONS OF RIVERINE HYDROECOSYSTEMS AND CURRENT PROBLEMS OF FISHERIES

Directory of Open Access Journals (Sweden)

I. Sherman

2013-12-01

Full Text Available Purpose. To analyze permanent negative effect from transformation of riverine hydroecosystems on fish fauna of Azov-Black Sea Basin. Methodology. Materials on the abiotic parameters of hydro river, according to information received by the regional meteorological stations and their own observations. Industrial situation analyzed by official reports Statefishagency of Ukraine. Findings. The studies demonstrate that there is a gradual process of an increase of the number of components, which virtually exclude the significance of positive results of self-purification by natural way, in water mass of transformed riverine systems. Spontaneous fluctuation of water level, which is caused by volumes of daily discharges, often instantly changes water levels on spawning areas. Fertilized fish eggs is periodically flooded or periodically dried, aeration regime changes that results in mass fish kills at different stages and phases of embryogenesis. Ecological situation of transformed hydroecosystems demonstrates coupling of negative effect of hydrological regime autostaticity in time and space, deterioration of water chemical composition. There is a permanent trend of saturation of water with components, which are not natural that results in doubtfulness of effective reproduction puts in question the possibility of stable state of valuable commercial fish stocks. At the same time, transformed water areas of riverine hydroecosystems have high bioproductive potential, which having its own food resource, is ineffectively transformed into food base for valuable commercial fish species. Against the background of noted changes, the considered water areas lost their suitability of providing effective reproduction. As a consequence, primary valuable fish species form low-yield generations and this is reflected on qualitative indices of commercial fishing. There was found a permanent trend of sufficiently fast change of the ratio of valuable and low-valuable species

Study of fisheries from riverine Danube Delta: Gorgova – Uzlina and Sontea – Furtuna lake-complexes

Directory of Open Access Journals (Sweden)

NAVODARU Ion

2006-09-01

Full Text Available The fish catch from riverine Danube delta has changed in both structure and size. The average of catches decreased from 1747 t (1963 - 1974 to 252 t (1992 - 2003 in Gorgova–Uzlina lake-complex and from 1,634 t to 211 t in Sontea–Furtuna lake-complex. The catch decline is effect of loosing of habitats and community structure change due to degradation of habitats. The dominant species – Carassius gibelio and Abramis brama has been yearly sampled since 1990 from the commercial catches for stock assessment. The growth, and exploitation parameters as well as the average biomass and the Maximum Sustainable Yields (MSY based on length frequency structure of landing catch have been estimated. Based on the average catch in the last 13 years (1992-2004 and of the fish stock assessment it resulted that in Gorgova – Uzlina lakes a quantity of 250 tons can be sustainable fished while in Sontea – Furtuna lakes - 210 tones. Lack of fishing effort monitoring and poor quality of catch data has induced uncertainty in stock assessment as well as MSY estimation.

Variable flushing mechanisms and landscape structure control stream DOC export during snowmelt in a set of nested catchments

Science.gov (United States)

Vincent J. Pacific; Kelsey G. Jencso; Brian L. McGlynn

2010-01-01

Stream DOC dynamics during snowmelt have been the focus of much research, and numerous DOC mobilization and delivery mechanisms from riparian and upland areas have been proposed. However, landscape structure controls on DOC export from riparian and upland landscape elements remains poorly understood. We investigated stream and groundwater DOC dynamics across three...

Algorithm Development and Validation for Satellite-Derived Distributions of DOC and CDOM in the US Middle Atlantic Bight

Science.gov (United States)

Mannino, Antonio; Russ, Mary E.; Hooker, Stanford B.

2007-01-01

In coastal ocean waters, distributions of dissolved organic carbon (DOC) and chromophoric dissolved organic matter (CDOM) vary seasonally and interannually due to multiple source inputs and removal processes. We conducted several oceanographic cruises within the continental margin of the U.S. Middle Atlantic Bight (MAB) to collect field measurements in order to develop algorithms to retrieve CDOM and DOC from NASA's MODIS-Aqua and SeaWiFS satellite sensors. In order to develop empirical algorithms for CDOM and DOC, we correlated the CDOM absorption coefficient (a(sub cdom)) with in situ radiometry (remote sensing reflectance, Rrs, band ratios) and then correlated DOC to Rrs band ratios through the CDOM to DOC relationships. Our validation analyses demonstrate successful retrieval of DOC and CDOM from coastal ocean waters using the MODIS-Aqua and SeaWiFS satellite sensors with mean absolute percent differences from field measurements of cdom)(355)1,6 % for a(sub cdom)(443), and 12% for the CDOM spectral slope. To our knowledge, the algorithms presented here represent the first validated algorithms for satellite retrieval of a(sub cdom) DOC, and CDOM spectral slope in the coastal ocean. The satellite-derived DOC and a(sub cdom) products demonstrate the seasonal net ecosystem production of DOC and photooxidation of CDOM from spring to fall. With accurate satellite retrievals of CDOM and DOC, we will be able to apply satellite observations to investigate interannual and decadal-scale variability in surface CDOM and DOC within continental margins and monitor impacts of climate change and anthropogenic activities on coastal ecosystems.

Decreased DOC concentrations in soil water in forested areas in southern Sweden during 1987-2008.

Science.gov (United States)

Löfgren, Stefan; Zetterberg, Therese

2011-04-15

During the last two decades, there is a common trend of increasing concentrations of dissolved organic carbon (DOC) in streams and lakes in Europe, Canada and the US. Different processes have been proposed to explain this trend and recently a unifying hypothesis was presented, concluding that declining sulphur deposition and recovery from acidification, is the single most important factor for the long-term DOC concentration trends in surface waters. If this recovery hypothesis is correct, the soil water DOC concentrations should increase as well. However, long-term soil water data from Sweden and Norway indicate that there are either decreasing or indifferent DOC concentrations, while positive DOC trends have been found in the Czech Republic. Based on the soil water data from two Swedish integrated monitoring sites and geochemical modelling, it has been shown that depending on changes in pH, ionic strength and soil Al pools, the DOC solubility might be positive, negative or indifferent. In this study, we test the acidification recovery hypothesis on long-term soil water data (25 and 50cm soil depth) from 68 forest covered sites in southern Sweden, showing clear signs of recovery from acidification. The main aim was to identify potential drivers for the DOC solubility in soil solution by comparing trends in DOC concentrations with observed changes in pH, ionic strength and concentrations of Al(n+). As in earlier Swedish and Norwegian studies, the DOC concentrations in soil water decreased or showed no trend. The generally small increases in pH (median <0.3 pH units) during the investigation period seem to be counterbalanced by the reduced ionic strength and diminished Al concentrations, increasing the organic matter coagulation. Hence, opposite to the conclusion for surface waters, the solubility of organic matter seems to decrease in uphill soils, as a result of the acidification recovery. Copyright © 2011 Elsevier B.V. All rights reserved.

Dissolved organic carbon (DOC) concentrations in UK soils and the influence of soil, vegetation type and seasonality.

Science.gov (United States)

van den Berg, Leon J L; Shotbolt, Laura; Ashmore, Mike R

2012-06-15

Given the lack of studies which measured dissolved organic carbon (DOC) over long periods, especially in non-forest habitat, the aim of this study was to expand the existing datasets with data of mainly non-forest sites that were representative of the major soil and habitat types in the UK. A further aim was to predict DOC concentrations from a number of biotic and abiotic explanatory variables such as rainfall, temperature, vegetation type and soil type in a multivariate way. Pore water was sampled using Rhizon or Prenart samplers at two to three week intervals for 1 year. DOC, pH, organic carbon, carbon/nitrogen (C:N) ratios of soils and slope were measured and data on vegetation, soil type, temperature and precipitation were obtained. The majority of the variation in DOC concentrations between the UK sites could be explained by simple empirical models that included annual precipitation, and soil C:N ratio with precipitation being negatively related to DOC concentrations and C:N ratio being positively related to DOC concentrations. Our study adds significantly to the data reporting DOC concentrations in soils, especially in grasslands, heathlands and moorlands. Broad climatic and site factors have been identified as key factors influencing DOC concentrations. Copyright © 2012 Elsevier B.V. All rights reserved.

Leaching of DOC, DN, and inorganic constituents from scrap tires.

Science.gov (United States)

Selbes, Meric; Yilmaz, Ozge; Khan, Abdul A; Karanfil, Tanju

2015-11-01

One concern for recycle and reuse of scrap tires is the leaching of tire constituents (organic and inorganic) with time, and their subsequent potential harmful impacts in environment. The main objective of this study was to examine the leaching of dissolved organic carbon (DOC), dissolved nitrogen (DN), and selected inorganic constituents from scrap tires. Different sizes of tire chips and crumb rubber were exposed to leaching solutions with pH's ranging from 3.0 to 10.0 for 28days. The leaching of DOC and DN were found to be higher for smaller size tire chips; however, the leaching of inorganic constituents was independent of the size. In general, basic pH conditions increased the leaching of DOC and DN, whereas acidic pH conditions led to elevated concentrations of metals. Leaching was minimal around the neutral pH values for all the monitored parameters. Analysis of the leaching rates showed that components associated with the rubbery portion of the tires (DOC, DN, zinc, calcium, magnesium, etc.) exhibited an initial rapid followed by a slow release. On the other hand, a constant rate of leaching was observed for iron and manganese, which are attributed to the metal wires present inside the tires. Although the total amounts that leached varied, the observed leaching rates were similar for all tire chip sizes and leaching solutions. Operation under neutral pH conditions, use of larger size tire chips, prewashing of tires, and removal of metal wires prior to application will reduce the impact of tire recycle and reuse. Copyright © 2015 Elsevier Ltd. All rights reserved.

Influences of organic carbon speciation on hyporheic corridor biogeochemistry and microbial ecology.

Science.gov (United States)

Stegen, James C; Johnson, Tim; Fredrickson, James K; Wilkins, Michael J; Konopka, Allan E; Nelson, William C; Arntzen, Evan V; Chrisler, William B; Chu, Rosalie K; Fansler, Sarah J; Graham, Emily B; Kennedy, David W; Resch, Charles T; Tfaily, Malak; Zachara, John

2018-02-08

The hyporheic corridor (HC) encompasses the river-groundwater continuum, where the mixing of groundwater (GW) with river water (RW) in the HC can stimulate biogeochemical activity. Here we propose a novel thermodynamic mechanism underlying this phenomenon and reveal broader impacts on dissolved organic carbon (DOC) and microbial ecology. We show that thermodynamically favorable DOC accumulates in GW despite lower DOC concentration, and that RW contains thermodynamically less-favorable DOC, but at higher concentrations. This indicates that GW DOC is protected from microbial oxidation by low total energy within the DOC pool, whereas RW DOC is protected by lower thermodynamic favorability of carbon species. We propose that GW-RW mixing overcomes these protections and stimulates respiration. Mixing models coupled with geophysical and molecular analyses further reveal tipping points in spatiotemporal dynamics of DOC and indicate important hydrology-biochemistry-microbial feedbacks. Previously unrecognized thermodynamic mechanisms regulated by GW-RW mixing may therefore strongly influence biogeochemical and microbial dynamics in riverine ecosystems.

A transcriptional coregulator, SPIN·DOC, attenuates the coactivator activity of Spindlin1.

Science.gov (United States)

Bae, Narkhyun; Gao, Min; Li, Xu; Premkumar, Tolkappiyan; Sbardella, Gianluca; Chen, Junjie; Bedford, Mark T

2017-12-22

Spindlin1 (SPIN1) is a transcriptional coactivator with critical functions in embryonic development and emerging roles in cancer. SPIN1 harbors three Tudor domains, two of which engage the tail of histone H3 by reading the H3-Lys-4 trimethylation and H3-Arg-8 asymmetric dimethylation marks. To gain mechanistic insight into how SPIN1 functions as a transcriptional coactivator, here we purified its interacting proteins. We identified an uncharacterized protein (C11orf84), which we renamed SPIN1 docking protein (SPIN·DOC), that directly binds SPIN1 and strongly disrupts its histone methylation reading ability, causing it to disassociate from chromatin. The Spindlin family of coactivators has five related members (SPIN1, 2A, 2B, 3, and 4), and we found that all of them bind SPIN·DOC. It has been reported previously that SPIN1 regulates gene expression in the Wnt signaling pathway by directly interacting with transcription factor 4 (TCF4). We observed here that SPIN·DOC associates with TCF4 in a SPIN1-dependent manner and dampens SPIN1 coactivator activity in TOPflash reporter assays. Furthermore, knockdown and overexpression experiments indicated that SPIN·DOC represses the expression of a number of SPIN1-regulated genes, including those encoding ribosomal RNA and the cytokine IL1B. In conclusion, we have identified SPIN·DOC as a transcriptional repressor that binds SPIN1 and masks its ability to engage the H3-Lys-4 trimethylation activation mark. © 2017 by The American Society for Biochemistry and Molecular Biology, Inc.

Degree of contribution (DoC) feature selection algorithm for structural brain MRI volumetric features in depression detection.

Science.gov (United States)

Kipli, Kuryati; Kouzani, Abbas Z

2015-07-01

Accurate detection of depression at an individual level using structural magnetic resonance imaging (sMRI) remains a challenge. Brain volumetric changes at a structural level appear to have importance in depression biomarkers studies. An automated algorithm is developed to select brain sMRI volumetric features for the detection of depression. A feature selection (FS) algorithm called degree of contribution (DoC) is developed for selection of sMRI volumetric features. This algorithm uses an ensemble approach to determine the degree of contribution in detection of major depressive disorder. The DoC is the score of feature importance used for feature ranking. The algorithm involves four stages: feature ranking, subset generation, subset evaluation, and DoC analysis. The performance of DoC is evaluated on the Duke University Multi-site Imaging Research in the Analysis of Depression sMRI dataset. The dataset consists of 115 brain sMRI scans of 88 healthy controls and 27 depressed subjects. Forty-four sMRI volumetric features are used in the evaluation. The DoC score of forty-four features was determined as the accuracy threshold (Acc_Thresh) was varied. The DoC performance was compared with that of four existing FS algorithms. At all defined Acc_Threshs, DoC outperformed the four examined FS algorithms for the average classification score and the maximum classification score. DoC has a good ability to generate reduced-size subsets of important features that could yield high classification accuracy. Based on the DoC score, the most discriminant volumetric features are those from the left-brain region.

A systematic examination of the relationships between CDOM and DOC in inland waters in China

Science.gov (United States)

Song, Kaishan; Zhao, Ying; Wen, Zhidan; Fang, Chong; Shang, Yingxin

2017-10-01

Chromophoric dissolved organic matter (CDOM) plays a vital role in the biogeochemical cycle in aquatic ecosystems. The relationship between CDOM and dissolved organic carbon (DOC) has been investigated, and this significant relationship lays the foundation for the estimation of DOC using remotely sensed imagery data. The current study examined samples from freshwater lakes, saline lakes, rivers and streams, urban water bodies, and ice-covered lakes in China for tracking the variation of the relationships between DOC and CDOM. The regression model slopes for DOC vs. aCDOM (275) ranged from extremely low 0.33 (highly saline lakes) to 1.03 (urban waters) and 3.01 (river waters). The low values were observed in saline lake waters and waters from semi-arid or arid regions, where strong photobleaching is expected due to less cloud cover, longer water residence time, and daylight hours. In contrast, high values were found in waters developed in wetlands or forest in Northeast China, where more organic matter was transported from catchment to waters. The study also demonstrated that closer relationships between CDOM and DOC were revealed when aCDOM (275) were sorted by the ratio of aCDOM(250)/aCDOM (365), which is a measure for the CDOM absorption with respect to its composition, and the determination of coefficient of the regression models ranged from 0.79 to 0.98 for different groups of waters. Our results indicate the relationships between CDOM and DOC are variable for different inland waters; thus, models for DOC estimation through linking with CDOM absorption need to be tailored according to water types.

5alphaDH-DOC (5alpha-dihydro-deoxycorticosterone) activates androgen receptor in castration-resistant prostate cancer.

Science.gov (United States)

Uemura, Motohide; Honma, Seijiro; Chung, Suyoun; Takata, Ryo; Furihata, Mutsuo; Nishimura, Kazuo; Nonomura, Norio; Nasu, Yasutomo; Miki, Tsuneharu; Shuin, Taro; Fujioka, Tomoaki; Okuyama, Akihiko; Nakamura, Yusuke; Nakagawa, Hidewaki

2010-08-01

Prostate cancer often relapses during androgen-depletion therapy, even under the castration condition in which circulating androgens are drastically reduced. High expressions of androgen receptor (AR) and genes involved in androgen metabolism indicate a continued role for AR in castration-resistant prostate cancers (CRPCs). There is increasing evidence that some amounts of 5alpha-dihydrotestosterone (DHT) and other androgens are present sufficiently to activate AR within CRPC tissues, and enzymes involved in the androgen and steroid metabolism, such as 5alpha-steroid reductases, are activated in CRPCs. In this report, we screened eight natural 5alphaDH-steroids to search for novel products of 5alpha-steroid reductases, and identified 11-deoxycorticosterone (DOC) as a novel substrate for 5alpha-steroid reductases in CRPCs. 11-Deoxycorticosterone (DOC) and 5alpha-dihydro-deoxycorticosterone (5alphaDH-DOC) could promote prostate cancer cell proliferation through AR activation, and type 1 5alpha-steroid reductase (SRD5A1) could convert from DOC to 5alphaDH-DOC. Sensitive liquid chromatography-tandem mass spectrometric analysis detected 5alphaDH-DOC in some clinical CRPC tissues. These findings implicated that under an extremely low level of DHT, 5alphaDH-DOC and other products of 5alpha-steroid reductases within CRPC tissues might activate the AR pathway for prostate cancer cell proliferation and survival under castration.

A multi-residue method for the analysis of pesticides and pesticide degradates in water using HLB solid-phase extraction and gas chromatography-ion trap mass spectrometry

Science.gov (United States)

Hladik, M.L.; Smalling, K.L.; Kuivila, K.M.

2008-01-01

A method was developed for the analysis of over 60 pesticides and degradates in water by HLB solid-phase extraction and gas-chromatography/mass spectrometry. Method recoveries and detection limits were determined using two surface waters with different dissolved organic carbon (DOC) concentrations. In the lower DOC water, recoveries and detection limits were 80%-108% and 1-12 ng/L, respectively. In the higher DOC water, the detection limits were slightly higher (1-15 ng/L). Additionally, surface water samples from four sites were analyzed and 14 pesticides were detected with concentrations ranging from 4 to 1,200 ng/L. ?? 2008 Springer Science+Business Media, LLC.

Colonization Habitat Controls Biomass, Composition, and Metabolic Activity of Attached Microbial Communities in the Columbia River Hyporheic Corridor

Energy Technology Data Exchange (ETDEWEB)

Stern, Noah; Ginder-Vogel, Matthew; Stegen, James C.; Arntzen, Evan; Kennedy, David W.; Larget, Bret R.; Roden, Eric E.; Kostka, Joel E.

2017-06-09

Hydrologic exchange plays a critical role in biogeochemical cycling within the hyporheic zone (the interface between river water and groundwater) of riverine ecosystems. Such exchange may set limits on the rates of microbial metabolism and impose deterministic selection on microbial communities that adapt to dynamically changing dissolved organic carbon (DOC) sources. This study examined the response of attached microbial communities (in situcolonized sand packs) from groundwater, hyporheic, and riverbed habitats within the Columbia River hyporheic corridor to “cross-feeding” with either groundwater, river water, or DOC-free artificial fluids. Our working hypothesis was that deterministic selection duringin situcolonization would dictate the response to cross-feeding, with communities displaying maximal biomass and respiration when supplied with their native fluid source. In contrast to expectations, the major observation was that the riverbed colonized sand had much higher biomass and respiratory activity, as well as a distinct community structure, compared with those of the hyporheic and groundwater colonized sands. 16S rRNA gene amplicon sequencing revealed a much higher proportion of certain heterotrophic taxa as well as significant numbers of eukaryotic algal chloroplasts in the riverbed colonized sand. Significant quantities of DOC were released from riverbed sediment and colonized sand, and separate experiments showed that the released DOC stimulated respiration in the groundwater and piezometer colonized sand. These results suggest that the accumulation and degradation of labile particulate organic carbon (POC) within the riverbed are likely to release DOC, which may enter the hyporheic corridor during hydrologic exchange, thereby stimulating microbial activity and imposing deterministic selective pressure on the microbial community composition.

IMPORTANCEThe influence of river water

Direct analysis of δ13C and concentration of dissolved organic carbon (DOC) in environmental samples by TOC-IRMS

Science.gov (United States)

Kirkels, Frédérique; Cerli, Chiara; Federherr, Eugen; Kalbitz, Karsten

2014-05-01

Dissolved organic carbon (DOC) plays an important role in carbon cycling in terrestrial and aquatic systems. Stable isotope analysis (delta 13C) of DOC could provide valuable insights in its origin, fluxes and environmental fate. Precise and routine analysis of delta 13C and DOC concentration are therefore highly desirable. A promising, new system has been developed for this purpose, linking a high-temperature combustion TOC analyzer trough an interface with a continuous flow isotope ratio mass spectrometer (Elementar group, Hanau, Germany). This TOC-IRMS system enables simultaneous stable isotope (bulk delta 13C) and concentration analysis of DOC, with high oxidation efficiency by high-temperature combustion for complex mixtures as natural DOC. To give delta 13C analysis by TOC-IRMS the necessary impulse for broad-scale application, we present a detailed evaluation of its analytical performance for realistic and challenging conditions inclusive low DOC concentrations and environmental samples. High precision (standard deviation, SD predominantly TOC-IRMS and conventional EA-IRMS) were achieved by TOC-IRMS for a broad diversity of DOC solutions. This precision is comparable or even slightly better than that typically reported for EA-IRMS systems, and improves previous techniques for δ13C analysis of DOC. Simultaneously, very good precision was obtained for DOC concentration measurements. Assessment of natural abundance and slightly 13C enriched DOC, a wide range of concentrations (0.2-150 mgC/L) and injection volumes (0.05-3 ml), demonstrated good analytical performance with negligible memory effects, no concentration/volume effects and a wide linearity. Low DOC concentrations (TOC-IRMS was successfully applied to analyze DOC from diverse terrestrial, freshwater and marine environments (SD TOC-IRMS performs fast and reliable analysis of DOC concentration and δ13C in aqueous samples, without any pre-concentration/freeze-drying. Flexible usage is highlighted by

CDOM fluorescence as a proxy of DOC concentration in natural waters: a comparison of four contrasting tropical systems.

Science.gov (United States)

Rochelle-Newall, E; Hulot, F D; Janeau, J L; Merroune, A

2014-01-01

Chromophoric dissolved organic matter (CDOM) fluorescence or absorption is often proposed as a rapid alternative to chemical methods for the estimation of bulk dissolved organic carbon (DOC) concentration in natural waters. However, the robustness of this method across a wide range of systems remains to be shown. We measured CDOM fluorescence and DOC concentration in four tropical freshwater and coastal environments (estuary and coastal, tropical shallow lakes, water from the freshwater lens of two small islands, and soil leachates). We found that although this method can provide an estimation of DOC concentration in sites with low variability in DOC and CDOM sources in systems where the variability of DOC and CDOM sources are high, this method should not be used as it will lead to errors in the estimation of the bulk DOC concentration.

panMetaDocs and DataSync - providing a convenient way to share and publish research data

Science.gov (United States)

Ulbricht, D.; Klump, J. F.

2013-12-01

In recent years research institutions, geological surveys and funding organizations started to build infrastructures to facilitate the re-use of research data from previous work. At present, several intermeshed activities are coordinated to make data systems of the earth sciences interoperable and recorded data discoverable. Driven by governmental authorities, ISO19115/19139 emerged as metadata standards for discovery of data and services. Established metadata transport protocols like OAI-PMH and OGC-CSW are used to disseminate metadata to data portals. With the persistent identifiers like DOI and IGSN research data and corresponding physical samples can be given unambiguous names and thus become citable. In summary, these activities focus primarily on 'ready to give away'-data, already stored in an institutional repository and described with appropriate metadata. Many datasets are not 'born' in this state but are produced in small and federated research projects. To make access and reuse of these 'small data' easier, these data should be centrally stored and version controlled from the very beginning of activities. We developed DataSync [1] as supplemental application to the panMetaDocs [2] data exchange platform as a data management tool for small science projects. DataSync is a JAVA-application that runs on a local computer and synchronizes directory trees into an eSciDoc-repository [3] by creating eSciDoc-objects via eSciDocs' REST API. DataSync can be installed on multiple computers and is in this way able to synchronize files of a research team over the internet. XML Metadata can be added as separate files that are managed together with data files as versioned eSciDoc-objects. A project-customized instance of panMetaDocs is provided to show a web-based overview of the previously uploaded file collection and to allow further annotation with metadata inside the eSciDoc-repository. PanMetaDocs is a PHP based web application to assist the creation of metadata in

Winter Ground Temperatures Control Snowmelt DOC Export From a Discontinuous Permafrost Watershed: A Multi-Year Perspective

Science.gov (United States)

Carey, S. K.

2006-12-01

For discontinuous and continuous permafrost watersheds, the largest mass flux of dissolved organic carbon (DOC) occurs during the snowmelt period. During this time, available allochtonous organic carbon that has accumulated over the winter in frozen organic soils is rapidly flushed to the basin outlet. While this process has been observed now in many river systems of different size and location, there have been few inter-annual reports on the mass of DOC loss and the factors controlling its variability during freshet. Hydrological and DOC fluxes were recorded for the 2002, 2003 and 2006 snowmelt season with supplementary over-winter data for an 8 square kilometer sub-basin (Granger Basin) of the Wolf Creek Research Basin, Yukon Territory, Canada. Granger Basin is an alpine catchment above treeline underlain with discontinuous permafrost (approximately 70 %) and has widespread surface organic soils up to 0.4 m in thickness. Pre-melt snow water equivalent varied widely throughout the basin, yet was greatest in 2006, followed by 2002 and 2003. Ground temperatures were notably colder throughout the 2003 winter compared with 2006 and 2002. For all years, discharge began in mid-May, and was a continuous event in 2002 and 2006. In 2003 four distinct melt-periods were observed due to rising and falling temperatures. During freshet, stream DOC concentration increased rapidly from 15 mg C/L on the first ascending limb of the hydrograph in each year. In 2003, DOC was largely flushed from the catchment several weeks prior to peak freshet. DOC concentration in wells and piezometers followed a similar pattern to streamflow DOC, with 2003 groundwater DOC concentrations less than 2002 and 2006. The total mass flux of DOC during freshet was 0.85, 0.45 and 1.01 g C/m2 for 2002, 2003 and 2006 respectively. Despite differences in pre-melt snow accumulation, the timing of melt and the volume of discharge, it appears that spring DOC export is largely controlled by over-winter ground

Trends in riverine element fluxes: A chronicle of regional socio-economic changes.

NARCIS (Netherlands)

Kopáček, Jiří; Hejzlar, Josef; Porcal, Petr; Posch, Maximilian

2017-01-01

We show how concentrations of water solutes in the Vltava River (Czech Republic) and their riverine outputs from the catchment were modified by socio-economic changes, land use, and hydrology between 1960 and 2015. In the early 1960s, HCO3 and Ca were the dominant ions. During 1960-1989 (a period of

G-DOC: A Systems Medicine Platform for Personalized Oncology1

Science.gov (United States)

Madhavan, Subha; Gusev, Yuriy; Harris, Michael; Tanenbaum, David M; Gauba, Robinder; Bhuvaneshwar, Krithika; Shinohara, Andrew; Rosso, Kevin; Carabet, Lavinia A; Song, Lei; Riggins, Rebecca B; Dakshanamurthy, Sivanesan; Wang, Yue; Byers, Stephen W; Clarke, Robert; Weiner, Louis M

2011-01-01

Currently, cancer therapy remains limited by a “one-size-fits-all” approach, whereby treatment decisions are based mainly on the clinical stage of disease, yet fail to reference the individual's underlying biology and its role driving malignancy. Identifying better personalized therapies for cancer treatment is hindered by the lack of high-quality “omics” data of sufficient size to produce meaningful results and the ability to integrate biomedical data from disparate technologies. Resolving these issues will help translation of therapies from research to clinic by helping clinicians develop patient-specific treatments based on the unique signatures of patient's tumor. Here we describe the Georgetown Database of Cancer (G-DOC), a Web platform that enables basic and clinical research by integrating patient characteristics and clinical outcome data with a variety of high-throughput research data in a unified environment. While several rich data repositories for high-dimensional research data exist in the public domain, most focus on a single-data type and do not support integration across multiple technologies. Currently, G-DOC contains data from more than 2500 breast cancer patients and 800 gastrointestinal cancer patients, G-DOC includes a broad collection of bioinformatics and systems biology tools for analysis and visualization of four major “omics” types: DNA, mRNA, microRNA, and metabolites. We believe that G-DOC will help facilitate systems medicine by providing identification of trends and patterns in integrated data sets and hence facilitate the use of better targeted therapies for cancer. A set of representative usage scenarios is provided to highlight the technical capabilities of this resource. PMID:21969811

Effects of different N sources on riverine DIN export and retention in subtropical high-standing island, Taiwan

Science.gov (United States)

Huang, J.-C.; Lee, T.-Y.; Lin, T.-C.; Hein, T.; Lee, L.-C.; Shih, Y.-T.; Kao, S.-J.; Shiah, F.-K.; Lin, N.-H.

2015-10-01

Increases in nitrogen (N) availability and mobility resulting from anthropogenic activities has substantially altered N cycle both locally and globally. Taiwan characterized by the subtropical montane landscape with abundant rainfall, downwind to the most rapidly industrializing east coast of China can be a demonstration site for extreme high N input and riverine DIN (dissolved inorganic N) export. We used 49 watersheds classified into low-, moderate-, and highly-disturbed categories based on population density to illustrate their differences in nitrogen inputs through atmospheric N deposition, synthetic fertilizers and human emission and DIN export ratios. Our results showed that the island-wide average riverine DIN export is ~ 3800 kg N km-2 yr-1, approximately 18-fold higher than the global average mostly due to the large input of synthetic fertilizers. The average riverine DIN export ratio is 0.30-0.51, which is much higher than the average of 0.20-0.25 of large rivers around the world indicating excessive N input relative to ecosystem demand or retention capacity. The low-disturbed watersheds, despite of high N input, only export 0.06-0.18 of the input so were well buffered to changes in input quantity suggesting high efficiency of nitrogen usage or high N retention capacity of the less disturbed watersheds. The high retention capacity probably is due to the effective uptake by secondary forests in the watersheds. The moderate-disturbed watersheds show a linear increase of output with increases in total N inputs and a mean DIN export ratio of 0.20 to 0.31. The main difference in land use between low and moderately disturbed watershed is the relative proportions of agricultural land and forests, not the built-up lands. Thus, their greater DIN export quantity could be attributed to N fertilizers used in the agricultural lands. The greater export ratios also imply that agricultural lands have lower proportional N retention capacity and that reforestation could be

A systematic examination of the relationships between CDOM and DOC in inland waters in China

Directory of Open Access Journals (Sweden)

K. Song

2017-10-01

Full Text Available Chromophoric dissolved organic matter (CDOM plays a vital role in the biogeochemical cycle in aquatic ecosystems. The relationship between CDOM and dissolved organic carbon (DOC has been investigated, and this significant relationship lays the foundation for the estimation of DOC using remotely sensed imagery data. The current study examined samples from freshwater lakes, saline lakes, rivers and streams, urban water bodies, and ice-covered lakes in China for tracking the variation of the relationships between DOC and CDOM. The regression model slopes for DOC vs. aCDOM (275 ranged from extremely low 0.33 (highly saline lakes to 1.03 (urban waters and 3.01 (river waters. The low values were observed in saline lake waters and waters from semi-arid or arid regions, where strong photobleaching is expected due to less cloud cover, longer water residence time, and daylight hours. In contrast, high values were found in waters developed in wetlands or forest in Northeast China, where more organic matter was transported from catchment to waters. The study also demonstrated that closer relationships between CDOM and DOC were revealed when aCDOM (275 were sorted by the ratio of aCDOM(250∕aCDOM (365, which is a measure for the CDOM absorption with respect to its composition, and the determination of coefficient of the regression models ranged from 0.79 to 0.98 for different groups of waters. Our results indicate the relationships between CDOM and DOC are variable for different inland waters; thus, models for DOC estimation through linking with CDOM absorption need to be tailored according to water types.

Riverine Bacterial Communities Reveal Environmental Disturbance Signatures within the Betaproteobacteria and Verrucomicrobia.

Science.gov (United States)

Balmonte, John Paul; Arnosti, Carol; Underwood, Sarah; McKee, Brent A; Teske, Andreas

2016-01-01

Riverine bacterial communities play an essential role in the biogeochemical coupling of terrestrial and marine environments, transforming elements and organic matter in their journey from land to sea. However, precisely due to the fact that rivers receive significant terrestrial input, the distinction between resident freshwater taxa vs. land-derived microbes can often become ambiguous. Furthermore, ecosystem perturbations could introduce allochthonous microbial groups and reshape riverine bacterial communities. Using full- and partial-length 16S ribosomal RNA gene sequences, we analyzed the composition of bacterial communities in the Tar River of North Carolina from November 2010 to November 2011, during which a natural perturbation occurred: the inundation of the lower reaches of an otherwise drought-stricken river associated with Hurricane Irene, which passed over eastern North Carolina in late August 2011. This event provided the opportunity to examine the microbiological, hydrological, and geochemical impacts of a disturbance, defined here as the large freshwater influx into the Tar River, superimposed on seasonal changes or other ecosystem variability independent of the hurricane. Our findings demonstrate that downstream communities are more taxonomically diverse and temporally variable than their upstream counterparts. More importantly, pre- vs. post-disturbance taxonomic comparison of the freshwater-dominant Betaproteobacteria class and the phylum Verrucomicrobia reveal a disturbance signature of previously undetected taxa of diverse origins. We use known traits of closely-related taxa to interpret the ecological function of disturbance-associated bacteria, and hypothesize that carbon cycling was enhanced post-disturbance in the Tar River, likely due to the flux of organic carbon into the system associated with the large freshwater pulse. Our analyses demonstrate the importance of geochemical and hydrological alterations in structuring bacterial communities

Riverine bacterial communities reveal environmental disturbance signatures within the Betaproteobacteria and Verrucomicrobia

Directory of Open Access Journals (Sweden)

John Paul Balmonte

2016-09-01

Full Text Available Riverine bacterial communities play an essential role in the biogeochemical coupling of terrestrial and marine environments, transforming elements and organic matter in their journey from land to sea. However, precisely due to the fact that rivers receive significant terrestrial input, the distinction between resident freshwater taxa versus land-derived microbes can often become ambiguous. Furthermore, ecosystem perturbations could introduce allochthonous microbial groups and reshape riverine bacterial communities. Using full- and partial-length 16S ribosomal RNA gene sequences, we analyzed the composition of bacterial communities in the Tar River of North Carolina from November 2010 to November 2010, during which a natural perturbation occurred: the inundation of the lower reaches of an otherwise drought-stricken river associated with Hurricane Irene, which passed over eastern North Carolina in late August 2011. This event provided the opportunity to examine the microbiological, hydrological and geochemical impacts of a disturbance, defined here as the large freshwater influx into the Tar River, superimposed on seasonal changes or other ecosystem variability independent of the hurricane. Our findings demonstrate that downstream communities are more taxonomically diverse and temporally variable than their upstream counterparts. More importantly, pre- versus post-disturbance taxonomic comparison of the freshwater-dominant Betaproteobacteria class and the phylum Verrucomicrobia reveal a disturbance signature of previously undetected taxa of diverse origins. We use known traits of closely-related taxa to interpret the ecological function of disturbance-associated bacteria, and hypothesize that carbon cycling was enhanced post-disturbance in the Tar River, likely due to the flux of organic carbon into the system associated with the large freshwater pulse. Our analyses demonstrate the importance of geochemical and hydrological alterations in

Mitigating agrichemicals from an artificial runoff event using a managed riverine wetland.

Science.gov (United States)

Lizotte, Richard E; Shields, F Douglas; Murdock, Justin N; Kröger, Robert; Knight, Scott S

2012-06-15

We examined the mitigation efficiency of a managed riverine wetland amended with a mixture of suspended sediment, two nutrients (nitrogen and phosphorus), and three pesticides (atrazine, metolachlor, and permethrin) during a simulated agricultural runoff event. Hydrologic management of the 500 m-long, 25 m-wide riverine wetland was done by adding weirs at both ends. The agrichemical mixture was amended to the wetland at the upstream weir simulating a four-hour, ~1cm rainfall event from a 16ha agricultural field. Water samples (1L) were collected every 30 min within the first 4h, then every 4h until 48 h, and again on days 5, 7, 14, 21, and 28 post-amendment at distances of 0m, 10 m, 40 m, 300 m and 500 m from the amendment point within the wetland for suspended solids, nutrient, and pesticide analyses. Peak sediment, nutrient, and pesticide concentrations occurred within 3 h of amendment at 0m, 10 m, 40 m, and 300 m downstream and showed rapid attenuation of agrichemicals from the water column with 79-98%, 42-98%, and 63-98% decrease in concentrations of sediments, nutrients, and pesticides, respectively, within 48 h. By day 28, all amendments were near or below pre-amendment concentrations. Water samples at 500 m showed no changes in sediment or nutrient concentrations; pesticide concentrations peaked within 48 h but at ≤11% of upstream peak concentrations and had dissipated by day 28. Managed riverine wetlands≥1 ha and with hydraulic residence times of days to weeks can efficiently trap agricultural runoff during moderate (1cm) late-spring and early-summer rainfall events, mitigating impacts to receiving rivers. Published by Elsevier B.V.

Disrupting the riverine DIC cycling by series hydropower exploitation in Karstic area

Energy Technology Data Exchange (ETDEWEB)

Wang Fushun, E-mail: fswang@shu.edu.cn [School of Environmental and Chemical Engineering, Shanghai University, Shanghai 200433 (China); Liu Congqiang; Wang Baoli; Liu Xiaolong; Li Ganrong; Guan Jin [State Key Laboratory of Environmental Geochemistry, Institute of Geochemistry, Chinese Academy of Sciences, Guiyang 550002 (China); Yao Chenchen; Wu Yiying [School of Environmental and Chemical Engineering, Shanghai University, Shanghai 200433 (China)

2011-06-15

Highlights: > Series hydropower exploitation disrupt riverine DIC cycling. > Hypoliminion introduction for hydropower lead to discontinuity of water chemistry. > Deep water released from reservoir can cause CO{sub 2} evasion. - Abstract: Two reservoirs in series in a Karst area were investigated in this study to understand the impact of river damming on riverine C cycling. Monthly sampling strategy was performed in Hongfeng and Baihua reservoirs, from July, 2007 to June, 2008. DIC and its isotopic compositions were determined. pCO{sub 2}, and calcite saturation index (SIc) were then calculated. Results show that {delta}{sup 13}C-DIC in surface water of these reservoirs responded clearly to the transformation between photosynthesis and respiration, which also changes the inorganic C equilibrium. Based on monthly monitoring data, the major biogeochemical processes along the water column in these reservoirs, was also discussed. It is noted that hypoliminion introduction for hydropower generation and then release can lead to the discontinuity of water chemistry along a river course, and has adverse effects on the downstream environment.

Riverine Settlement Adaptation Characteristic in Mentaya River, East Kotawaringin Regency, Kalimantan Province

Science.gov (United States)

Esariti, L.; Yuliastuti, N.; Ratih, N. K.

2018-02-01

The research looks for the importance of riverine settlement preservation as one of the efforts to carry out sustainable management of a traditional settlement. East Kalimantan, more specifically riverine settlement in Mentaya River is known as one of the traditional settlements that put river as the central of their livelihood activities. The theory of Rapopport [1] was used to investigate the importance of cultural aspect influence to the settlement process, and to seek for the behavioural and environment relationship in determining the pattern of adaptation process. Mix method approach was conducted by utilizing in depth interviews among 40 respondents within three districts, namely in Baamang, Mentaya Seberang and Mentawa Baru Ketapang subdistrict. The result shows that culture dominantly affect the process of settlement adaptation, especially the aspect of family structure, social network, and kinship. The adaptation pattern is influenced significantly by physical environment, type of physical condition of the houses, economic condition and the degree of heritage preservation motive. It sums up that adaptation process could be effective if the integration of culture, activities and government regulations is performed.

The Fic protein Doc uses an inverted substrate to phosphorylate and inactivate EF-Tu.

Science.gov (United States)

Castro-Roa, Daniel; Garcia-Pino, Abel; De Gieter, Steven; van Nuland, Nico A J; Loris, Remy; Zenkin, Nikolay

2013-12-01

Fic proteins are ubiquitous in all of the domains of life and have critical roles in multiple cellular processes through AMPylation of (transfer of AMP to) target proteins. Doc from the doc-phd toxin-antitoxin module is a member of the Fic family and inhibits bacterial translation by an unknown mechanism. Here we show that, in contrast to having AMPylating activity, Doc is a new type of kinase that inhibits bacterial translation by phosphorylating the conserved threonine (Thr382) of the translation elongation factor EF-Tu, rendering EF-Tu unable to bind aminoacylated tRNAs. We provide evidence that EF-Tu phosphorylation diverged from AMPylation by antiparallel binding of the NTP relative to the catalytic residues of the conserved Fic catalytic core of Doc. The results bring insights into the mechanism and role of phosphorylation of EF-Tu in bacterial physiology as well as represent an example of the catalytic plasticity of enzymes and a mechanism for the evolution of new enzymatic activities.

The eDoc-Server Project Building an Institutional Repository for the Max Planck Society

CERN Document Server

Beier, Gerhard

2004-01-01

With the eDoc-Server the Heinz Nixdorf Center for Information Management in the Max Planck Society (ZIM) provides the research institutes of the Max Planck Society (MPS) with a platform to disseminate, store, and manage their scientific output. Moreover, eDoc serves as a tool to facilitate and promote open access to scientific information and primary sources. Since its introduction in October 2002 eDoc has gained high visibility within the MPS. It has been backed by strong institutional commitment to open access as documented in the 'Berlin Declaration on Open Access to the Data of the Sciences and Humanities', which was initiated by the MPS and found large support among major research organizations in Europe. This paper will outline the concept as well as the current status of the eDoc-Server, providing an example for the development and introduction of an institutional repository in a multi-disciplinary research organization.

A mobile water analysis laboratory for the study of stream nutrient and DOC dynamics

Science.gov (United States)

Echevarria Roman, Y.; Pullin, M. J.; Schwingle, R.; Gabrielsen, P. J.

2013-12-01

The dynamics of nutrient and dissolved organic carbon (DOC) quantity and composition in streams vary with season and in response to hydrologic events. Periodic grab sampling can capture some of this variation, but has also been shown to miss high flow events. Sampling during winter, during thunderstorms, and at night is difficult and sometimes hazardous. For these reasons, we have developed a mobile laboratory that autonomously determines pH, Eh, conductivity, dissolved oxygen, turbidity, nitrate, phosphate, DOC, DIC, as well as DOC fluorescence and absorbance continuously on a minutes timescale. The laboratory includes a Labview operated computer system that allows remote control and interaction with pumps, pressure, temperature, and flow sensors as well as the analytical instruments. Climate control allows for operation in winter. The design and operation of this laboratory will be presented. We will also discuss example data showing diurnal changes and responses to hydrologic events in DOC quantity and quality in the East Fork of the Jemez River, New Mexico.

Local and regional scale exchanges of dissolved organic carbon (DOC) between tidal wetlands and their adjacent coastal waters

Science.gov (United States)

Osburn, C. L.; Joshi, I.; Lebrasse, M. C.; Oviedo-Vargas, D.; Bianchi, T. S.; Bohnenstiehl, D. R.; D'Sa, E. J.; He, R.; Ko, D.; Arellano, A.; Ward, N. D.

2017-12-01

The contribution of blue carbon from tidal wetlands to the coastal ocean in the form of dissolved organic carbon (DOC) represents a terrestrial-aquatic linkage of increasing importance. DOC flux results will be presented from local (tidal creek) and regional (bays) scale studies in which various combinations of field observations, ocean-color satellite observations, and the outputs of high-resolution hydrodynamic models were used to estimate DOC export. The first project was located in Bald Head Creek, a tributary to the Cape Fear River estuary in eastern North Carolina (NC). DOC fluxes were computed using a bathymetric data collected via unmanned surface vehicle (USV) and a numerical hydrodynamic model (SCHISM) based on the relationships between colored dissolved organic matter (CDOM) absorption, DOC concentration, and salinity taken from field observations. Model predictions estimated an annual net export of DOC at 54 g C m-2 yr-1 from the tidal creek to the adjacent estuary. Carbon stable isotope (δ13C) values were used to estimate the contribution of wetland carbon to this export. In the second project, DOC fluxes from the Apalachicola Bay, FL, Barataria Bay, LA, were based on the development of algorithms between DOC and CDOM absorption derived from the VIIRS ocean color sensor. The Navy Coastal Ocean Model (NCOM) was used to compute salt flux estimates from each bay to the Louisiana-Texas shelf. The relationship between salinity and CDOM was used to estimate net annual DOC exports of 8.35 x 106 g C m-2 y-1 (Apalachicola Bay) and 7.14 x 106 g C m-2 yr-1 (Barataria Bay). These values approximate 13% and 9% of the annual loads of DOC from the Mississippi River to the Gulf of Mexico, respectively. CDOM and lignin were used in a mixing model to estimate wetland-derived DOC were 2% for Apalachicola Bay and 13% for Barataria Bay, the latter having one of the highest rates of relative sea level rise in North America. Results from our project demonstrated the utility

Characterisation of DOC and its relation to the deep terrestrial biosphere

Science.gov (United States)

Vieth, Andrea; Vetter, Alexandra; Sachse, Anke; Horsfield, Brian

2010-05-01

The deep subsurface is populated by a large number of microorganisms playing a pivotal role in the carbon cycling. The question arises as to the origin of the potential carbon sources that support deep microbial communities and their possible interactions within the deep subsurface. As the carbon sources need to be dissolved in formation fluids to become available to microorganisms, the dissolved organic carbon (DOC) needs further characterisation as regards concentration, structural as well as molecular composition and origin. The Malm carbonates in the Molasse basin of southern Germany are of large economic potential as they are targets for both hydrocarbon and geothermal exploration (ANDREWS et al., 1987). Five locations that differ in their depth of the Malm aquifer between 220 m and 3445 m below surface have been selected for fluid sampling. The concentration and the isotopic composition of the DOC have been determined. To get a better insight into the structural composition of the DOC, we also applied size exclusion chromatography and quantified the amount of low molecular weight organic acids (LMWOA) by ion chromatography. With increasing depth of the aquifer the formation fluids show increasing salinity as chloride concentrations increase from 2 to 300 mg/l and also the composition of the DOC changes. Water samples from greater depth (>3000 m) showed that the DOC mainly consists of LMWOA (max. 83 %) and low percentages of neutral compounds (alcohols, aldehyde, ketones, amino acids) as well as "building blocks". Building blocks have been described to be the oxidation intermediates from humic substances to LMWOA. With decreasing depth of the aquifer, the DOC of the fluid becomes increasingly dominated by neutral compounds and the percentage of building blocks increases to around 27%. The fluid sample from 220 m depth still contains a small amount of humic substances. The DOC of formation fluids in some terrestrial sediments may originate from organic

Production and decomposition of new DOC by marine plankton communities: carbohydrates, refractory components and nutrient limitation

DEFF Research Database (Denmark)

Kragh, T.; Søndergaard, Morten

2009-01-01

The accumulation and biodegradation of dissolved organic carbon (DOC) and dissolved and particulate combined neutral sugars (DCNS, PCNS) were followed during a period of 22 days in experimental marine phytoplankton incubations. Five different growth regimes were established in 11 m(3) coastal...... in the mesocosms with diatoms dominating could be explained by DCNS, while only 6% was explained in the mesocosms with few diatoms. PCNS composition was similar in all mesocosms and with dominance of glucose and mannose, while DCNS were more evenly distributed with the following mole percentages fucose 15......, rhamnose 14, arabinose 6, galactose 27, glucose 20 and mannose 18%. The DCNS composition did not reflect the PCNS composition at any time during the experiment. Accumulated DCNS were quickly degraded and only 1% of the new RDOC was explained by DCNS. RDOC accumulated after day #17 in the two mesocosms...

Does wildfire cause cascading effects on aquatic C cycling? A study of soil, well and lake DOC composition and bio/photolability

Science.gov (United States)

Olefeldt, D.; Turetsky, M. R.; Devito, K. J.; Blodau, C.

2012-12-01

In May 2011 a wildfire broke out north of Utikuma Lake in central Alberta, Canada, which eventually burned an area of ~880 km2. Wildfire alters soil properties, potentially altering the chemical composition of terrestrial DOC that reaches downstream aquatic environments. In order to study the potential effects of wildfire on lake carbon cycling, we sampled and incubated DOC from soil samples (n=52), wells (n=35) and lakes (n=32) from within and outside the recent fire perimeter. We incubated the DOC samples under both dark and UV conditions to assess both bio- and photolability, and followed DOC composition throughout the incubations by measuring DOC absorbing and fluorescing properties. A strong effect of wildfire was found among DOC samples leached from surface peatland and upland soils - with fire yielding increased DOC aromaticity associated with decreased biodegradability but also increased photolability. Parallel factor analysis of fluorescence matrices revealed distinct regions that were associated with DOC leached from charred soils, potentially linked to their lower biodegradability. Dark and UV conditions gave rise to very different trajectories of changes to DOC composition throughout incubations, with preferential losses of non-aromatic DOC under dark conditions and aromatic DOC under UV conditions. The DOC composition index that was found to best predict both DOC bio- and photolability was specific UV absorbance, which is also a very simple and quick index to measure. For lakes, we found that the primary influences on DOC composition and bio-/photolability was linked to lake size and hydrogeological setting (whether located on a lacustrine clay plain or in a moraine/outwash region) that controls groundwater influence and the hydrological connectivity to adjacent peatlands. Further analysis of well and lake water incubations will be used to detect whether wildfire can be detected to have a subtle secondary effect on DOC composition and lability or if

48 CFR 1335.016-70 - DOC procedures for the use of broad agency announcements.

Science.gov (United States)

2010-10-01

... 48 Federal Acquisition Regulations System 5 2010-10-01 2010-10-01 false DOC procedures for the use of broad agency announcements. 1335.016-70 Section 1335.016-70 Federal Acquisition Regulations System DEPARTMENT OF COMMERCE SPECIAL CATEGORIES OF CONTRACTING RESEARCH AND DEVELOPMENT CONTRACTING 1335.016-70 DOC...

Effect of light and nutrient availability on the release of dissolved organic carbon (DOC) by Caribbean turf algae

NARCIS (Netherlands)

Mueller, B.; den Haan, J.; Visser, P.M.; Vermeij, M.J.A.; van Duyl, F.C.

2016-01-01

Turf algae increasingly dominate benthic communities on coral reefs. Given their abundance and high dissolved organic carbon (DOC) release rates, turf algae are considered important contributors to the DOC pool on modern reefs. The release of photosynthetically fixed carbon as DOC generally, but not

Long-term changes in acidity and DOC in throughfall and soil water in Finnish forests.

Science.gov (United States)

Ukonmaanaho, Liisa; Starr, Mike; Lindroos, Antti-Jussi; Nieminen, Tiina M

2014-11-01

The main objective of this study was to examine if any detectable trends in dissolved organic carbon (DOC), sulphate (SO4-S) concentrations and acid neutralizing capacity (ANC) in throughfall (TF) and soil water (SW) could be found during 1990-2010 and to relate them to recent changes in decreased acid deposition. The study was conducted in seven boreal coniferous forest sites: four of which are managed and three unmanaged forests sites. Generally, temporal trend showed a significant decrease in SO4-S concentrations in bulk precipitation (BP), TF and SW. At some of the sites, there was an increasing tendency in BP and TF in the DOC concentrations. This feature coincides with decreasing SO4-S concentration, indicating that SO4-S may be an important driver of DOC release from the canopy. However, a slightly increased temperature, larger senescing needle mass and consequently increased decaying activity in the canopy may partly explain the increasing trend in DOC. In SW, no consistent DOC trend was seen. At some sites, the decreased base cation concentrations mostly account for the decrease in the ANC values in SW and TF.

Aging and temperature effects on DOC and elemental release from a metal contaminated soil

International Nuclear Information System (INIS)

Martinez, C.E.; Jacobson, A.R.; McBride, M.B.

2003-01-01

Increased aging and temperatures may affect DOC element complexes and their release. - The combined effect of time and temperature on elemental release and speciation from a metal contaminated soil (Master Old Site, MOS) was investigated. The soil was equilibrated at 10, 28, 45, 70 and 90 deg. C for 2 days, 2 weeks, and 2 months in the laboratory. Dissolved organic carbon (DOC), total soluble elements (by ICP), and labile metals (by DPASV) were determined in the filtered (0.22 μm) supernatants. For the samples equilibrated at 90 deg. C, DOC fractions were size fractionated by filtration and centrifugation; a subsample was only centrifuged while another was also filtered through a 0.45 μm filter. Analyses of the supernatants (ICP, DPASV, DOC) were performed on all size fraction subsamples. Dissolved organic carbon (DOC) increased both with temperature and incubation time; however, metal behavior was not as uniform. In general, total soluble metal release (ICP) paralleled the behavior of DOC, increasing with both time and temperature, and confirming the importance of soil organic matter (SOM) in metal retention. Voltammetric analysis (dpasv) of Cu and Zn showed that very little of these metals remains labile in solution due, presumably, to complexation with dissolved organic matter. Labile concentrations of Cd, on the other hand, constituted a significant portion (50%) of total soluble Cd. Copper and Al increased in solution with time (up to 2 months) and temperature up to 70 deg. C; however, at 90 deg. C the soluble concentration declined sharply. The same behavior was observed after equilibration for longer periods of time (550 days) at lower temperatures (23 and 70 deg. C). While concentrations of labile Cu and total soluble Cu and Al increased in the unfiltered samples, the trend remained the same. DPASV analysis showing shifts in labile Cu complexes with temperature and time, together with the results from the unfiltered samples, lead to the hypothesis that Cu

Hydrologic and forest management controls on DOC dynamics in the small watersheds of the H.J. Andrews Experimental Forest, OR

Science.gov (United States)

Lajtha, K.; Jones, J. A.

2016-12-01

Dissolved organic carbon (DOC) export from hillslopes to streams is an important component of the carbon cycle of a catchment and may be a critical source of energy for the aquatic food web in receiving waters. Using a long-term record of DOC and other dissolved nutrients and elements from paired watersheds from the H.J. Andrews Experimental Forest in Oregon, we explored hydrologic, climatic, and land-use controls on seasonal and inter-annual patterns of DOC flux in a seasonally dry ecosystem. Seasonal patterns of DOC flux demonstrated source limitations to DOC export, with DOC concentrations highest immediately following the first rains after a dry summer, and lowest after winter rains. In contrast, more geochemically-controlled elements showed simple dilution-concentration patterns with no seasonal hysteresis. Inter-annual patterns of DOC flux, however, did not provide evidence of source limitation, with DOC flux within a watershed tightly correlated to total discharge but not temperature. Among watersheds, forest harvest, even over 50 years ago, significantly reduced DOC flux but not fluxes of other elements including N; this response was linked to the loading of coarse woody debris to the forest floor. Chemical fingerprinting of DOC revealed that old-growth watersheds had higher fluxes of DOC characteristic of forest floor organic materials, likely delivered to streams through more surficial preferential flow pathways not subject to microbial alteration, respiration, or sorption losses. Taken together these results suggest that the biogeochemical composition of forested streams reflects both current hydrologic patterns and also processes that occurred many decades ago within the catchment.

Diurnal and seasonal DOC and POC variability in the land-locked sea

Directory of Open Access Journals (Sweden)

Beata Szymczycha

2017-07-01

Full Text Available Organic matter is a minor yet important component of the marine environment. The aim of this study was to investigate the diurnal and seasonal changes in dissolved and particulate organic carbon (DOC and POC, respectively. Thus, DOC and POC as well as chlorophyll a (Chl a, δ13C, NO3−, NO2−, NH4+, PO43−, salinity, pH, and temperature were regularly measured in samples collected for 24 h (2-h resolution in the Gdańsk Deep (54°44.730′N, 19°08.531′E at three water depths (1, 10, and 40 m during sampling campaigns in 2011 (May, 2014 (May, and 2015 (January, March, May, July, September, November. Seasonal variations in DOC and POC followed the seasonality of Chl a (proportional trend and nutrients (reverse trend concentrations. Diurnal oscillations were detected in six out of the eight measurement series. The strongest diurnal variability in both POC and DOC occurred in May 2011 and March 2015, when phytoplankton activity was highest (high Chl a. The surprisingly low δ13C values (range: −28‰ to −24‰ measured over the course of the study revealed the gaps in our knowledge of the isotopic characteristics of terrestrial- vs. marine-derived particulate organic matter.

Declines in the dissolved organic carbon (DOC) concentration and flux from the UK

Science.gov (United States)

Worrall, Fred; Howden, Nicholas J. K.; Burt, Tim P.; Bartlett, Rebecca

2018-01-01

Increased concentrations of dissolved organic carbon (DOC) have been reported for many catchments across the northern hemisphere. Hypotheses to explain the increase have varied (eg. increasing air temperature or recovery from acidification) but one test of alternative hypotheses is the trend over the recent decade, with the competing hypotheses predicting: continuing increase; the rate of increase declining with time; and even decrease in concentration. In this study, records of DOC concentration in non-tidal rivers across the UK were examined for the period 2003-2012. The study found that: Of the 62 decade-long concentration trends that could be examined, 3 showed a significant increase, 17 experienced no significant change and 42 showed a significant decrease; in 28 of the 42 significant decreases, a significant step change was apparent with step changes being a decrease in concentration in every case. Of the 118 sites where annual flux and concentration records were available from 1974, 28 showed a significant step change down in flux and 52 showed a step down in concentration. The modal year of the step changes was 2000 with no step changes observed before 1982. At the UK national scale, DOC flux peaked in 2005 at 1354 ktonnes C/yr (5.55 tonnes C/km2/yr) but has declined since. The study suggests that there is a disconnection between DOC records from large catchments at their tidal limits and complementary records from headwater catchments, which means that mechanisms believed to be driving increases in DOC concentrations in headwaters will not necessarily be those controlling trends in DOC concentration further downstream. We propose that the changes identified here have been driven by changes in in-stream processing and changes brought about by the Urban Waste Water Treatment Directive. Therefore, signals identified in headwater catchments may bear little relation to those observed in large rivers much further downstream and vice versa.

The role of forest type in the variability of DOC in atmospheric deposition at forest plots in Italy.

Science.gov (United States)

Arisci, S; Rogora, M; Marchetto, A; Dichiaro, F

2012-06-01

Dissolved organic carbon (DOC) was studied in atmospheric deposition samples collected on a weekly basis in 2005-2009 at 10 forest plots in Italy. The plots covered a wide range of geographical attributes and were representative of the main forest types in Italy. Both spatial and temporal variations in DOC concentrations and fluxes are discussed, with the aim of identifying the main factors affecting DOC variability. DOC concentration increased from bulk to throughfall and stemflow water samples at all sites, as an effect of leaching from leaves and branches, going from 0.7-1.7 mg C L(-1) in bulk samples to 1.8-15.8 mg C L(-1) in throughfall and 4.2-10.7 mg C L(-1) in stemflow, with striking differences among the various plots. Low concentrations were found in runoff (0.5-2.0 mg C L(-1)), showing that the export of DOC via running waters was limited. The seasonality of DOC in throughfall samples was evident, with the highest concentration in summer when biological activity is at a maximum, and minima in winter due to limited DOC production and leaching. Statistical analysis revealed that DOC had a close relationship with organic and total nitrogen, and with nutrient ions, and a negative correlation with precipitation amount. Forest type proved to be a major factor affecting DOC variability: concentration and, to a lesser extent, fluxes were lower in stands dominated by deciduous species. The character of evergreens, and the size and shape of their leaves and needles, which regulate the interception mechanism of dry deposition, are mainly responsible for this.

Land-based salmon aquacultures change the quality and bacterial degradation of riverine dissolved organic matter

Science.gov (United States)

Kamjunke, Norbert; Nimptsch, Jorge; Harir, Mourad; Herzsprung, Peter; Schmitt-Kopplin, Philippe; Neu, Thomas R.; Graeber, Daniel; Osorio, Sebastian; Valenzuela, Jose; Carlos Reyes, Juan; Woelfl, Stefan; Hertkorn, Norbert

2017-03-01

Aquacultures are of great economic importance worldwide but pollute pristine headwater streams, lakes, and estuaries. However, there are no in-depth studies of the consequences of aquacultures on dissolved organic matter (DOM) composition and structure. We performed a detailed molecular level characterization of aquaculture DOM quality and its bacterial degradation using four salmon aquacultures in Chile. Fluorescence measurements, ultrahigh-resolution mass spectrometry, and nuclear magnetic resonance spectroscopy of the DOM revealed specific and extensive molecular alterations caused by aquacultures. Aquacultures released large quantities of readily bioavailable metabolites (primarily carbohydrates and peptides/proteins, and lipids), causing the organic matter downstream of all the investigated aquacultures to deviate strongly from the highly processed, polydisperse and molecularly heterogeneous DOM found in pristine rivers. However, the upstream individual catchment DOM signatures remained distinguishable at the downstream sites. The benthic algal biovolume decreased and the bacterial biovolume and production increased downstream of the aquacultures, shifting stream ecosystems to a more heterotrophic state and thus impairing the ecosystem health. The bacterial DOM degradation rates explain the attenuation of aquaculture DOM within the subsequent stream reaches. This knowledge may aid the development of improved waste processing facilities and may help to define emission thresholds to protect sensitive stream ecosystems.

Impact of catchment geophysical characteristics and climate on the regional variability of dissolved organic carbon (DOC) in surface water.

Science.gov (United States)

Cool, Geneviève; Lebel, Alexandre; Sadiq, Rehan; Rodriguez, Manuel J

2014-08-15

Dissolved organic carbon (DOC) is a recognized indicator of natural organic matter (NOM) in surface waters. The aim of this paper is twofold: to evaluate the impact of geophysical characteristics, climate and ecological zones on DOC concentrations in surface waters and, to develop a statistical model to estimate the regional variability of these concentrations. In this study, multilevel statistical analysis was used to achieve three specific objectives: (1) evaluate the influence of climate and geophysical characteristics on DOC concentrations in surface waters; (2) compare the influence of geophysical characteristics and ecological zones on DOC concentrations in surface waters; and (3) develop a model to estimate the most accurate DOC concentrations in surface waters. The case study involved 115 catchments from surface waters in the Province of Quebec, Canada. Results showed that mean temperatures recorded 60 days prior to sampling, total precipitation 10 days prior to sampling and percentages of wetlands, coniferous forests and mixed forests have a significant positive influence on DOC concentrations in surface waters. The catchment mean slope had a significant negative influence on DOC concentrations in surface waters. Water type (lake or river) and deciduous forest variables were not significant. The ecological zones had a significant influence on DOC concentrations. However, geophysical characteristics (wetlands, forests and slope) estimated DOC concentrations more accurately. A model describing the variability of DOC concentrations was developed and can be used, in future research, for estimating DBPs in drinking water as well evaluating the impact of climate change on the quality of surface waters and drinking water. Copyright © 2014 Elsevier B.V. All rights reserved.

Overexpression of DOC-1R inhibits cell cycle G1/S transition by repressing CDK2 expression and activation.

Science.gov (United States)

Liu, Qi; Liu, Xing; Gao, Jinlan; Shi, Xiuyan; Hu, Xihua; Wang, Shusen; Luo, Yang

2013-01-01

DOC-1R (deleted in oral cancer-1 related) is a novel putative tumor suppressor. This study investigated DOC-1R antitumor activity and the underlying molecular mechanisms. Cell phenotypes were assessed using flow cytometry, BrdU incorporation and CDK2 kinase assays in DOC-1R overexpressing HeLa cells. In addition, RT-PCR and Western blot assays were used to detect underlying molecular changes in these cells. The interaction between DOC-1R and CDK2 proteins was assayed by GST pull-down and immunoprecipitation-Western blot assays. The data showed that DOC-1R overexpression inhibited G1/S phase transition, DNA replication and suppressed CDK2 activity. Molecularly, DOC-1R inhibited CDK2 expression at the mRNA and protein levels, and there were decreased levels of G1-phase cyclins (cyclin D1 and E) and elevated levels of p21, p27, and p53 proteins. Meanwhile, DOC-1R associated with CDK2 and inhibited CDK2 activation by obstructing its association with cyclin E and A. In conclusion, the antitumor effects of DOC-1R may be mediated by negatively regulating G1 phase progression and G1/S transition through inhibiting CDK2 expression and activation.

Effects of different N sources on riverine DIN export and retention in a subtropical high-standing island, Taiwan

Science.gov (United States)

Huang-Chuan, Jr.; Lee, Tsung-Yu; Lin, Teng-Chiu; Hein, Thomas; Lee, Li-Chin; Shih, Yu-Ting; Kao, Shuh-Ji; Shiah, Fuh-Kwo; Lin, Neng-Huei

2016-03-01

Increases in nitrogen (N) availability and mobility resulting from anthropogenic activities have substantially altered the N cycle, both locally and globally. Taiwan characterized by the subtropical montane landscape with abundant rainfall, downwind of the most rapidly industrializing eastern coast of China, can be a demonstration site for extremely high N input and riverine DIN (dissolved inorganic N) export. We used 49 watersheds with similar climatic and landscape settings but classified into low, moderate, and highly disturbed categories based on population density to illustrate their differences in nitrogen inputs (through atmospheric N deposition, synthetic fertilizers, and human emission) and DIN export ratios. Our results showed that the island-wide average riverine DIN export is ˜ 3800 kg N km-2 yr-1, approximately 18 times the global average. The average riverine DIN export ratios are 0.30-0.51, which are much higher than the averages of 0.20-0.25 of large rivers around the world, indicating excessive N input relative to ecosystem demand or retention capacity. The low disturbed watersheds have a high N retention capacity and DIN export ratios of 0.06-0.18 in spite of the high N input (˜ 4900 kg N km-2 yr-1). The high retention capacity is likely due to effective uptake by secondary forests in the watersheds. The moderately disturbed watersheds show a linear increase in DIN export with increases in total N inputs and mean DIN export ratios of 0.20 to 0.31. The main difference in land use between low and moderately disturbed watersheds is the greater proportion of agricultural land cover in the moderately disturbed watersheds. Thus, their greater DIN export could be attributed to N fertilizers used in the agricultural lands. The greater export ratios also imply that agricultural lands have a lower proportional N retention capacity and that reforestation could be an effective land management practice to reduce riverine DIN export. The export ratios of the

Antibiotics in riverine runoff of the Pearl River Delta and Pearl River Estuary, China: Concentrations, mass loading and ecological risks

International Nuclear Information System (INIS)

Xu, Weihai; Yan, Wen; Li, Xiangdong; Zou, Yongde; Chen, Xiaoxiang; Huang, Weixia; Miao, Li; Zhang, Ruijie; Zhang, Gan; Zou, Shichun

2013-01-01

Ten antibiotics belonging to three groups (macrolides, fluoroquinolones and sulfonamides) were investigated in riverine runoff of the Pearl River Delta (PRD) and Pearl River Estuary (PRE), South China for assessing the importance of riverine runoff in the transportation of contaminants from terrestrial sources to the open ocean. All antibiotics were detected in the eight outlets with concentrations ranging from 0.7 to 127 ng L −1 . The annual mass loadings of antibiotics from the PRD to the PRE and coast were 193 tons with 102 tons from the fluoroquinolone group. It showed that antibiotics decreased from the riverine outlets to the PRE and open ocean. Risk assessment showed that most of these antibiotics showed various ecological risks to the relevant aquatic organisms, in which ofloxacin (OFL), erythromycin (ETM) and ciprofloxacin (CIP) posed high ecological risks to the studied aquatic environments. -- Highlights: •Antibiotics were ubiquitous in the river water and costal water in the Pearl River Delta. •Antibiotics exhibited distinct temporal and spatial trends in the riverine runoff outlets. •Annual outflows of antibiotics were 193 tons from the Pearl River to coastal ocean. •Some antibiotics posed high risks to some organisms in the PRD environments. -- Antibiotics were ubiquitous in the river and coastal water in the Pearl River Delta and posed various ecological risks to the relevant aquatic organisms

Radioimmunoassay of free urinary 18-hydroxydeoxycorticosterone (18-OH-DOC) in patients with essential hypertension

International Nuclear Information System (INIS)

Hornung, J.; Gless, K.H.; Abdelhamid, S.; Vielhauer, W.; Vecsei, P.

1978-01-01

Specific antiserum was raised in white New Zealand rabbits using 18-hydroxydeoxycorticosterone-3-oxime-BSA complex as antigen. The urinary free 18-OH-DOC was estimated after dichloromethane extraction and separation in one paper chromatographic system (propylene glycol/toluene). The mean 18-OH-DOC excretion value (+-S.D.) in normal subjects was 0.861+-0.527 μg/24 h (n=23). ACTH produced a 25-fold increase in the excretion of free 18-OH-DOC. Dexamethasone suppressed the values to the lower range of sensitivity. 32% of patients of essential hypertension showed a moderate increase in the free urinary 18-OH-DOC values. The mean value (+-S.D.) in the low renin hypertension group was 2.50 +- 1.49 μg/24 h (n=19), in the normal renin patient group 1.84 +- 1.32 μg/24 h (n=38), and in the group with elevated plasma renin 1.61 +- 1.22 μg/24 h (n=8). The difference between controls and the hypertensive groups was statistically significant. Among the different hypertensive groups significant differences could not be calculated. (Auth.)

The importance of the relationship between scale and process in understanding long-term DOC dynamics.

Science.gov (United States)

Clark, J M; Bottrell, S H; Evans, C D; Monteith, D T; Bartlett, R; Rose, R; Newton, R J; Chapman, P J

2010-06-01

Concentrations of dissolved organic carbon have increased in many, but not all, surface waters across acid impacted areas of Europe and North America over the last two decades. Over the last eight years several hypotheses have been put forward to explain these increases, but none are yet accepted universally. Research in this area appears to have reached a stalemate between those favouring declining atmospheric deposition, climate change or land management as the key driver of long-term DOC trends. While it is clear that many of these factors influence DOC dynamics in soil and stream waters, their effect varies over different temporal and spatial scales. We argue that regional differences in acid deposition loading may account for the apparent discrepancies between studies. DOC has shown strong monotonic increases in areas which have experienced strong downward trends in pollutant sulphur and/or seasalt deposition. Elsewhere climatic factors, that strongly influence seasonality, have also dominated inter-annual variability, and here long-term monotonic DOC trends are often difficult to detect. Furthermore, in areas receiving similar acid loadings, different catchment characteristics could have affected the site specific sensitivity to changes in acidity and therefore the magnitude of DOC release in response to changes in sulphur deposition. We suggest that confusion over these temporal and spatial scales of investigation has contributed unnecessarily to the disagreement over the main regional driver(s) of DOC trends, and that the data behind the majority of these studies is more compatible than is often conveyed. Copyright (c) 2010 Elsevier B.V. All rights reserved.

Fenton and Fenton-like oxidation of pesticide acetamiprid in water samples: kinetic study of the degradation and optimization using response surface methodology.

Science.gov (United States)

Mitsika, Elena E; Christophoridis, Christophoros; Fytianos, Konstantinos

2013-11-01

The aims of this study were (a) to evaluate the degradation of acetamiprid with the use of Fenton reaction, (b) to investigate the effect of different concentrations of H2O2 and Fe(2+), initial pH and various iron salts, on the degradation of acetamiprid and (c) to apply response surface methodology for the evaluation of degradation kinetics. The kinetic study revealed a two-stage process, described by pseudo- first and second order kinetics. Different H2O2:Fe(2+) molar ratios were examined for their effect on acetamiprid degradation kinetics. The ratio of 3 mg L(-1) Fe(2+): 40 mg L(-1) H2O2 was found to completely remove acetamiprid at less than 10 min. Degradation rate was faster at lower pH, with the optimal value at pH 2.9, while Mohr salt appeared to degrade acetamiprid faster. A central composite design was selected in order to observe the effects of Fe(2+) and H2O2 initial concentration on acetamiprid degradation kinetics. A quadratic model fitted the experimental data, with satisfactory regression and fit. The most significant effect on the degradation of acetamiprid, was induced by ferrous iron concentration followed by H2O2. Optimization, aiming to minimize the applied ferrous concentration and the process time, proposed a ratio of 7.76 mg L(-1) Fe(II): 19.78 mg L(-1) H2O2. DOC is reduced much more slowly and requires more than 6h of processing for 50% degradation. The use to zero valent iron, demonstrated fast kinetic rates with acetamiprid degradation occurring in 10 min and effective DOC removal. Copyright © 2013 Elsevier Ltd. All rights reserved.

Shedding light on DOC release by benthic primary producers and its consumption by bioeroding sponges

NARCIS (Netherlands)

Müller, Benjamin

2015-01-01

The effect of light on dissolved organic carbon (DOC) release of benthic primary producers (BPPs) was investigated on the coral reefs of Curaçao. Incubation experiments revealed a positive relation between the DOC release of four Caribbean reef algae (Cladophora sp., Dictyota menstrualis, Lobophora

Doc of prophage P1 is inhibited by its antitoxin partner Phd through fold complementation

DEFF Research Database (Denmark)

Garcia-Pino, Abel; Christensen-Dalsgaard, Mikkel; Wyns, Lode

2008-01-01

Prokaryotic toxin-antitoxin modules are involved in major physiological events set in motion under stress conditions. The toxin Doc (death on curing) from the phd/doc module on phage P1 hosts the C-terminal domain of its antitoxin partner Phd (prevents host death) through fold complementation....... This Phd domain is intrinsically disordered in solution and folds into an alpha-helix upon binding to Doc. The details of the interactions reveal the molecular basis for the inhibitory action of the antitoxin. The complex resembles the Fic (filamentation induced by cAMP) proteins and suggests a possible......-antitoxin locus for its action in vivo....

Non-linear, connectivity and threshold-dominated runoff-generation controls DOC and heavy metal export in a small peat catchment

Science.gov (United States)

Birkel, Christian; Broder, Tanja; Biester, Harald

2017-04-01

Peat soils act as important carbon sinks, but they also release large amounts of dissolved organic carbon (DOC) to the aquatic system. The DOC export is strongly tied to the export of soluble heavy metals. The accumulation of potentially toxic substances due to anthropogenic activities, and their natural export from peat soils to the aquatic system is an important health and environmental issue. However, limited knowledge exists as to how much of these substances are mobilized, how they are mobilized in terms of flow pathways and under which hydrometeorological conditions. In this study, we report from a combined experimental and modelling effort to provide greater process understanding from a small, lead (Pb) and arsenic (As) contaminated upland peat catchment in northwestern Germany. We developed a minimally parameterized, but process-based, coupled hydrology-biogeochemistry model applied to simulate detailed hydrometric and biogeochemical data. The model was based on an initial data mining analysis, in combination with regression relationships of discharge, DOC and element export. We assessed the internal model DOC-processing based on stream-DOC hysteresis patterns and 3-hourly time step groundwater level and soil DOC data (not used for calibration as an independent model test) for two consecutive summer periods in 2013 and 2014. We found that Pb and As mobilization can be efficiently predicted from DOC transport alone, but Pb showed a significant non-linear relationship with DOC, while As was linearly related to DOC. The relatively parsimonious model (nine calibrated parameters in total) showed the importance of non-linear and rapid near-surface runoff-generation mechanisms that caused around 60% of simulated DOC load. The total load was high even though these pathways were only activated during storm events on average 30% of the monitoring time - as also shown by the experimental data. Overall, the drier period 2013 resulted in increased nonlinearity, but

ORCHIDEE-SOM: modeling soil organic carbon (SOC) and dissolved organic carbon (DOC) dynamics along vertical soil profiles in Europe

Science.gov (United States)

Camino-Serrano, Marta; Guenet, Bertrand; Luyssaert, Sebastiaan; Ciais, Philippe; Bastrikov, Vladislav; De Vos, Bruno; Gielen, Bert; Gleixner, Gerd; Jornet-Puig, Albert; Kaiser, Klaus; Kothawala, Dolly; Lauerwald, Ronny; Peñuelas, Josep; Schrumpf, Marion; Vicca, Sara; Vuichard, Nicolas; Walmsley, David; Janssens, Ivan A.

2018-03-01

Current land surface models (LSMs) typically represent soils in a very simplistic way, assuming soil organic carbon (SOC) as a bulk, and thus impeding a correct representation of deep soil carbon dynamics. Moreover, LSMs generally neglect the production and export of dissolved organic carbon (DOC) from soils to rivers, leading to overestimations of the potential carbon sequestration on land. This common oversimplified processing of SOC in LSMs is partly responsible for the large uncertainty in the predictions of the soil carbon response to climate change. In this study, we present a new soil carbon module called ORCHIDEE-SOM, embedded within the land surface model ORCHIDEE, which is able to reproduce the DOC and SOC dynamics in a vertically discretized soil to 2 m. The model includes processes of biological production and consumption of SOC and DOC, DOC adsorption on and desorption from soil minerals, diffusion of SOC and DOC, and DOC transport with water through and out of the soils to rivers. We evaluated ORCHIDEE-SOM against observations of DOC concentrations and SOC stocks from four European sites with different vegetation covers: a coniferous forest, a deciduous forest, a grassland, and a cropland. The model was able to reproduce the SOC stocks along their vertical profiles at the four sites and the DOC concentrations within the range of measurements, with the exception of the DOC concentrations in the upper soil horizon at the coniferous forest. However, the model was not able to fully capture the temporal dynamics of DOC concentrations. Further model improvements should focus on a plant- and depth-dependent parameterization of the new input model parameters, such as the turnover times of DOC and the microbial carbon use efficiency. We suggest that this new soil module, when parameterized for global simulations, will improve the representation of the global carbon cycle in LSMs, thus helping to constrain the predictions of the future SOC response to global

panMetaDocs, eSciDoc, and DOIDB - an infrastructure for the curation and publication of file-based datasets for 'GFZ Data Services'

Science.gov (United States)

Ulbricht, Damian; Elger, Kirsten; Bertelmann, Roland; Klump, Jens

2016-04-01

With the foundation of DataCite in 2009 and the technical infrastructure installed in the last six years it has become very easy to create citable dataset DOIs. Nowadays, dataset DOIs are increasingly accepted and required by journals in reference lists of manuscripts. In addition, DataCite provides usage statistics [1] of assigned DOIs and offers a public search API to make research data count. By linking related information to the data, they become more useful for future generations of scientists. For this purpose, several identifier systems, as ISBN for books, ISSN for journals, DOI for articles or related data, Orcid for authors, and IGSN for physical samples can be attached to DOIs using the DataCite metadata schema [2]. While these are good preconditions to publish data, free and open solutions that help with the curation of data, the publication of research data, and the assignment of DOIs in one software seem to be rare. At GFZ Potsdam we built a modular software stack that is made of several free and open software solutions and we established 'GFZ Data Services'. 'GFZ Data Services' provides storage, a metadata editor for publication and a facility to moderate minted DOIs. All software solutions are connected through web APIs, which makes it possible to reuse and integrate established software. Core component of 'GFZ Data Services' is an eSciDoc [3] middleware that is used as central storage, and has been designed along the OAIS reference model for digital preservation. Thus, data are stored in self-contained packages that are made of binary file-based data and XML-based metadata. The eSciDoc infrastructure provides access control to data and it is able to handle half-open datasets, which is useful in embargo situations when a subset of the research data are released after an adequate period. The data exchange platform panMetaDocs [4] makes use of eSciDoc's REST API to upload file-based data into eSciDoc and uses a metadata editor [5] to annotate the files

Careers and Networking: Professional Development for Graduate Students and Post-docs

Science.gov (United States)

Jungbluth, S.; Boiteau, R.; Bottjer, D.; De Leo, F. C.; Hawko, N.; Ilikchyan, I.; Bruno, B. C.

2013-12-01

Established in 2006 by the National Science Foundation, the Center for Microbial Oceanography: Research and Education (C-MORE) is a multi-institutional Science and Technology Center based at the University of Hawai i. One of C-MORE's missions is to provide graduate students and post-docs with state-of-the-art training, which primarily occurs through laboratory- and field-based research. Additionally, C-MORE offers a Professional Development Training Program (PDTP) to help students and post-docs develop a range of "soft" skills such as science communication, leadership, proposal writing, teaching and mentoring (Bruno et al, 2013). The PDTP not only provides professional development training to graduate students and post-docs, but also encourages these young scientists to take leadership of their training. The Professional Development Organizing Committee (PDOC), composed of students and post-docs across the various C-MORE institutions, works closely with the Education Office to implement the eight core PDTP modules as well as 'on-demand' workshops. In February 2013, we organized a workshop to promote networking and foster scientific collaborations among C-MORE graduate students and post-doctoral researchers at the seven partner institutions: the University of Hawaii, Massachusetts Institute of Technology, Woods Hole Oceanographic Institution, Oregon State University, University of California Santa Cruz, Monterey Bay Aquarium Research Institute and Columbia University. The workshop was held in New Orleans in conjunction with the 2013 ASLO/ Ocean Sciences national meeting. In this paper, we will describe the student-led planning process, the workshop itself, and evaluation results. We will also present examples of some of the collaborations that resulted from this workshop.

Oil pollution in the Riverine Areas - a case study of Akwa-Ibom State ...

African Journals Online (AJOL)

A study of the oil production activities in the riverine area of Akwa-lbom State was carried out by the . In this regard, visits to different oil locations were made to obtain information on the consequences of oil production activities. Through these visits, the ecological situation of the environment was assessed, useful information ...

The Utility of CDOM for Improving the Resolution of Riverine DOM Fluxes and Biogeochemical Function

Science.gov (United States)

Spencer, R. G.; Aiken, G.; Mann, P. J.; Holmes, R. M.; Niggemann, J.; Dittmar, T.; Hernes, P.; Stubbins, A.

2014-12-01

A major historical limitation to geochemical studies assessing fluvial fluxes of dissolved organic matter (DOM) has been the issue of both temporal and spatial scaling. Examples will be presented from watersheds around the world highlighting how chromophoric dissolved organic matter (CDOM) measurements can be utilized as proxies for more intensive and expensive analytical analyses (e.g. molecular-level organic biomarkers). Utilizing these refined CDOM loads for terrigenous biomarkers results in improved temporal resolution and a significant change in flux estimates. Examining CDOM and dissolved organic carbon (DOC) flux data from an assortment of terrestrial biomes we establish a robust relationship between CDOM and DOC loads. The application of this relationship allows future studies to derive DOC loads from CDOM utilizing emerging in-situ or remote sensing technologies and thus refine river-to-ocean DOC fluxes, as well as exploit historic imagery to examine how fluxes may have changed. Calculated CDOM yields from a range of rivers are correlated to watershed percent wetland and highlight the importance of certain regions with respect to CDOM flux to the coastal ocean. This approach indicates that future studies might predict CDOM and DOC yields for different watershed types that could then be readily converted to loads providing for the estimation of CDOM and DOC export from ungauged watersheds. Examination of CDOM yields also highlights important geographical regions for future study with respect to the role of terrigenous CDOM in ocean color budgets and CDOM's role in biogeochemical processes. Finally, examples will be presented linking CDOM parameters to DOM composition and biogeochemical properties with the aim of providing measurements to improve the spatial and especially temporal resolution of the role DOM plays in fluvial networks.

Doc2B acts as a calcium sensor for vesicle priming requiring synaptotagmin-1, Munc13-2 and SNAREs

DEFF Research Database (Denmark)

Houy, Sébastien; Groffen, Alexander J; Ziomkiewicz, Iwona

2017-01-01

Doc2B is a cytosolic protein with binding sites for Munc13 and Tctex-1 (dynein light chain), and two C2-domains that bind to phospholipids, Ca2+ and SNAREs. Whether Doc2B functions as a calcium sensor akin to synaptotagmins, or in other calcium-independent or calcium-dependent capacities is debated....... We here show by mutation and overexpression that Doc2B plays distinct roles in two sequential priming steps in mouse adrenal chromaffin cells. Mutating Ca2+-coordinating aspartates in the C2A-domain localizes Doc2B permanently at the plasma membrane, and renders an upstream priming step Ca2......+-independent, whereas a separate function in downstream priming depends on SNARE-binding, Ca2+-binding to the C2B-domain of Doc2B, interaction with ubMunc13-2 and the presence of synaptotagmin-1. Another function of Doc2B - inhibition of release during sustained calcium elevations - depends on an overlapping...

Transport and degradation of perchlorate in deep vadose zone: implications from direct observations during bioremediation treatment

Science.gov (United States)

Dahan, Ofer; Katz, Idan; Avishai, Lior; Ronen, Zeev

2017-08-01

An in situ bioremediation experiment of a deep vadose zone ( ˜ 40 m) contaminated with a high concentration of perchlorate (> 25 000 mg L-1) was conducted through a full-scale field operation. Favourable environmental conditions for microbiological reduction of perchlorate were sought by infiltrating an electron donor-enriched water solution using drip irrigation underlying an airtight sealing liner. A vadose zone monitoring system (VMS) was used for real-time tracking of the percolation process, the penetration depth of dissolved organic carbon (DOC), and the variation in perchlorate concentration across the entire soil depth. The experimental conditions for each infiltration event were adjusted according to insight gained from data obtained by the VMS in previous stages. Continuous monitoring of the vadose zone indicated that in the top 13 m of the cross section, perchlorate concentration is dramatically reduced from thousands of milligrams per litre to near-detection limits with a concurrent increase in chloride concentration. Nevertheless, in the deeper parts of the vadose zone (< 17 m), perchlorate concentration increased, suggesting its mobilization down through the cross section. Breakthrough of DOC and bromide at different depths across the unsaturated zone showed limited migration capacity of biologically consumable carbon and energy sources due to their enhanced biodegradation in the upper soil layers. Nevertheless, the increased DOC concentration with concurrent reduction in perchlorate and increase in the chloride-to-perchlorate ratio in the top 13 m indicate partial degradation of perchlorate in this zone. There was no evidence of improved degradation conditions in the deeper parts where the initial concentrations of perchlorate were significantly higher.

Dissolved organic carbon (DOC) and coliform bacteria in ...

African Journals Online (AJOL)

Out of the 40 sites sampled during both the wet and dry seasons, 11 contained colifrorm bacteria during the wet season, while only 2 contained the microbes during the dry season. The microbes were detected only in the wells. DOC was detected in 37 sites during the wet season and in 31 sites during the dry season within ...

Absorption features of chromophoric dissolved organic matter (CDOM) and tracing implication for dissolved organic carbon (DOC) in Changjiang Estuary, China

OpenAIRE

Zhang, X. Y.; Chen, X.; Deng, H.; Du, Y.; Jin, H. Y.

2013-01-01

Chromophoric dissolved organic matter (CDOM) represents the light absorbing fraction of dissolved organic carbon (DOC). Studies have shown that the optical properties of CDOM can be used to infer the distribution and diffusion characteristics of DOC in the estuary and coastal zone. The inversion of DOC concentrations from remote sensing has been implemented in certain regions. In this study we investigate the potential of tracing DOC from CDOM by the measure...

Atmospheric nutrient inputs to the northern levantine basin from a long-term observation: sources and comparison with riverine inputs

Science.gov (United States)

Koçak, M.; Kubilay, N.; Tuğrul, S.; Mihalopoulos, N.

2010-12-01

Aerosol and rainwater samples have been collected at a rural site located on the coastline of the Eastern Mediterranean, Erdemli, Turkey between January 1999 and December 2007. Riverine sampling was carried out at five Rivers (Ceyhan, Seyhan, Göksu, Berdan and Lamas) draining into the Northeastern Levantine Basin (NLB) between March 2002 and July 2007. Samples have been analyzed for macronutrients of phosphate, silicate, nitrate and ammonium (PO43-, Sidiss, NO3- and NH4+). Phosphate and silicate in aerosol and rainwater showed higher and larger variations during the transitional period when air flows predominantly originate from North Africa and Middle East/Arabian Peninsula. Deficiency of alkaline material have been found to be the main reason of the acidic rain events whilst high pH values (>7) have been associated with high Sidiss concentrations due to sporadic dust events. In general, lowest nitrate and ammonium concentrations in aerosol and rainwater have been associated with air flow from the Mediterranean Sea. Comparison of atmospheric with riverine fluxes demonstrated that DIN and PO43- fluxes to NLB have been dominated by atmosphere (~90% and ~60% respectively) whereas the input of Si was mainly derived from riverine runoff (~90%). N/P ratios in the atmospheric deposition (233); riverine discharge (28) revealed that NLB receives excessive amounts of DIN and this unbalanced P and N inputs may provoke even more phosphorus deficiency. Observed molar Si/N ratio suggested Si limitation relative to nitrogen might cause a switch from diatom dominated communities to non-siliceous populations particularly at coastal NLB.

Organochlorine pesticides and polychlorinated biphenyls in riverine runoff of the Pearl River Delta, China: Assessment of mass loading, input source and environmental fate

International Nuclear Information System (INIS)

Guan Yufeng; Wang Jizhong; Ni Honggang; Zeng, Eddy Y.

2009-01-01

A large-scale sampling program was conducted to simultaneously collect water samples at the eight major riverine runoff outlets of the Pearl River Delta (PRD), South China to assess the importance of riverine runoff in transporting anthropogenic pollutants from terrestrial sources to the coastal ocean. The concentrations of Σ 21 OCPs (sum of 21 OCP components) and Σ 20 PCBs (sum of 20 PCB congeners) were 2.57-41.2 and 0.12-1.47 ng/L, respectively. Compositional distributions of DDTs suggested the possibility of new input sources in the study area, but contributions from dicofol seemed considerably low. The annual inputs of Σ 21 OCPs and Σ 20 PCBs were 3090 and 215 kg, with those of total HCHs and DDTs being 1110 and 1020 kg, respectively. A mass balance consideration indicated that riverine runoff is the major mode carrying OCPs from the PRD to the coastal ocean, and the majority of OCPs is further dissipated to open seas. - Mass loadings, input sources and environmental fate of organochlorine pesticides and polychlorinated biphenyls in riverine runoff of the Pearl River Delta, China are assessed

Regionalizando a produção de documentários – DocTV

Directory of Open Access Journals (Sweden)

Karla Holanda

2013-12-01

Full Text Available DocTV Program was a project created and carried out by Brazilian Ministry of Culture (2003-2010. Documentaries on DocTV were produced in each state and exhibited on the national network by way of public stations. This regional character in their production and exhibition is rare in the history of relationship between television and independent production in Brazil. This paper details the Program’s operation as well as its guiding principles and results.

Development and psychometric properties of the Shared Decision Making Questionnaire--physician version (SDM-Q-Doc).

Science.gov (United States)

Scholl, Isabelle; Kriston, Levente; Dirmaier, Jörg; Buchholz, Angela; Härter, Martin

2012-08-01

To develop and psychometrically test a brief instrument for assessing the physician's perspective of the shared decision-making process in clinical encounters. We adapted the 9-item Shared Decision Making Questionnaire (SDM-Q-9) for patients to generate a new version for physicians (SDM-Q-Doc). The physician version was tested in clinical encounters between 29 physicians and 324 patients in German outpatient care contexts. Analyses of the extent to which the instrument was accepted, the reliability of the instrument, and the factorial structure of the scale were performed. Physicians showed a high level of acceptance toward the SDM-Q-Doc. Item discrimination parameters were above .4 for all but one item. An analysis of internal consistency yielded a Cronbach's α of .88. Factor analysis confirmed a one-dimensional structure. The results of this study suggest that the SDM-Q-Doc is a well-accepted and reliable instrument for assessing the physician's perspective during SDM processes in clinical encounters. To our knowledge, the SDM-Q-Doc is the first psychometrically tested scale available for assessing the physician's perspective. The SDM-Q-Doc can be used in studies that analyze the effectiveness of the implementation of SDM and as a quality indicator in quality assurance programs and health service assessments. Copyright © 2012 Elsevier Ireland Ltd. All rights reserved.

Temporal-spatial variation of DOC concentration, UV absorbance and the flux estimation in the Lower Dagu River, China

Science.gov (United States)

Xi, Min; Kong, Fanlong; Li, Yue; Kong, Fanting

2017-12-01

Dissolved organic carbon (DOC) is an important component for both carbon cycle and energy balance. The concentration, UV absorbance, and export flux of DOC in the natural environment dominate many important transport processes. To better understand the temporal and spatial variation of DOC, 7 sites along the Lower Dagu River were chosen to conduct a comprehensive measurement from March 2013 to February 2014. Specifically, water samples were collected from the Lower Dagu River between the 26th and 29th of every month during the experimental period. The DOC concentration (CDOC) and UV absorbance were analyzed using a total organic carbon analyzer and the ultraviolet-visible absorption spectrum, and the DOC export flux was estimated with a simple empirical model. The results showed that the CDOC of the Lower Dagu River varied from 1.32 to 12.56 mg/L, consistent with global rivers. The CDOC and UV absorbance showed significant spatial variation in the Dagu River during the experiential period because of the upstream natural processes and human activities in the watershed. The spatial variation is mainly due to dam or reservoir constructions, riverside ecological environment changes, and non-point source or wastewater discharge. The seasonal variation of CDOC was mainly related to the source of water DOC, river runoff, and temperature, and the UV absorbance and humification degree of DOC had no obvious differences among months ( P<0.05). UV absorbance was applied to test the CDOC in Lower Dagu River using wave lengths of 254 and 280 nm. The results revealed that the annual DOC export flux varied from 1.6 to 3.76 × 105 g C/km2/yr in a complete hydrological year, significantly lower than the global average. It is worth mentioning that the DOC export flux was mainly concentrated in summer (˜90% of all-year flux in July and August), since the runoff in the Dagu River took place frequently in summer. These observations implied environment change could bring the temporal

'invisible' DOM in hourly-resolved headwater river records from Northern Amazonia

Science.gov (United States)

Pereira, R.; Bovolo, C.; Spencer, R. G.; Hernes, P. J.; Tipping, E.; Vieth-Hillebrand, A.; Chappell, N.; Lewis-Franklin, A.; Parkin, G.; Wagner, T.

2012-12-01

Global river networks annually process ~3 billion tonnes of organic carbon but only ~17% reaches the ocean. These estimates suggest rivers are not mere transportation pipes but biogeochemical reactors. Inland waters are therefore fundamental to the understanding of carbon and nutrient interactions between land and ocean. Within these global estimates, tropical rivers contribute ~two-thirds of the global dissolved organic matter flux to the ocean. Recent studies suggest that up to 50% of the CO2 outgassed from tropical rivers is derived from terrestrial organic matter and that the terrestrial-aquatic interface in river headwaters are hotspots of biochemical activity. However, to date, most tropical riverine studies focus on the main river stem or mouth and therefore the dynamics of tropical headwater organic matter cycling within the global carbon cycle are unknown. We present a geochemical and hydrological time-series (sub-hourly resolution) of river water DOC concentration, source and composition from a pristine lowland rainforest headwater of the Burro Burro River, a tributary of the Essequibo River, the 3rd largest river in S. America. We show that during and after a rainstorm event, DOC concentrations increase an order of magnitude (10 to 114mg/L) in less than 30 mins, far exceeding the entire seasonal DOC range measured in 2010 and 2011 (17-28mg/L). The source (δ13C-DOC) of DOC during the rainstorm event changes from microbial/aquatic (-21.9‰ to -25.7‰) at low/intermediate DOC concentration to C3 vegetation supply (-26.8‰ to -30.3‰) during peak DOC flushing. First radiocarbon data shows that riverine DOC is relatively young (106.8-110.9 %modern), however, tropical soils suggest a potential for organic matter to be preserved (360-1200 BP). The fundamental relationship between DOC and coloured dissolved organic matter (CDOM), measured as UV absorbance (SUVA254), holds only for low riverine DOC concentrations with proportionally high lignin contribution

Autumn photoproduction of carbon monoxide in Jiaozhou Bay, China

Science.gov (United States)

Ren, Chunyan; Yang, Guipeng; Lu, Xiaolan

2014-06-01

Carbon monoxide (CO) plays a significant role in global warming and atmospheric chemistry. Global oceans are net natural sources of atmospheric CO. CO at surface ocean is primarily produced from the photochemical degradation of chromophoric dissolved organic matter (CDOM). In this study, the effects of photobleaching, temperature and the origin (terrestrial or marine) of CDOM on the apparent quantum yields (AQY) of CO were studied for seawater samples collected from Jiaozhou Bay. Our results demonstrat that photobleaching, temperature and the origin of CDOM strongly affected the efficiency of CO photoproduction. The concentration, absorbance and fluorescence of CDOM exponentially decreased with increasing light dose. Terrestrial riverine organic matter could be more prone to photodegradation than the marine algae-derived one. The relationships between CO AQY and the dissolved organic carbon-specific absorption coefficient at 254 nm for the photobleaching study were nonlinear, whereas those of the original samples were strongly linear. This suggests that: 1) terrestrial riverine CDOM was more efficient than marine algae-derived CDOM for CO photoproduction; 2) aromatic and olefinic moieties of the CDOM pool were affected more strongly by degradation processes than by aliphatic ones. Water temperature and the origin of CDOM strongly affected the efficiency of CO photoproduction. The photoproduction rate of CO in autumn was estimated to be 31.98 μmol m-2 d-1 and the total DOC photomineralization was equivalent to 3.25%-6.35% of primary production in Jiaozhou Bay. Our results indicate that CO photochemistry in coastal areas is important for oceanic carbon cycle.

Fido, a novel AMPylation domain common to fic, doc, and AvrB.

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Lisa N Kinch

2009-06-01

Full Text Available The Vibrio parahaemolyticus type III secreted effector VopS contains a fic domain that covalently modifies Rho GTPase threonine with AMP to inhibit downstream signaling events in host cells. The VopS fic domain includes a conserved sequence motif (HPFx[D/E]GN[G/K]R that contributes to AMPylation. Fic domains are found in a variety of species, including bacteria, a few archaea, and metazoan eukaryotes.We show that the AMPylation activity extends to a eukaryotic fic domain in Drosophila melanogaster CG9523, and use sequence and structure based computational methods to identify related domains in doc toxins and the type III effector AvrB. The conserved sequence motif that contributes to AMPylation unites fic with doc. Although AvrB lacks this motif, its structure reveals a similar topology to the fic and doc folds. AvrB binds to a peptide fragment of its host virulence target in a similar manner as fic binds peptide substrate. AvrB also orients a phosphate group from a bound ADP ligand near the peptide-binding site and in a similar position as a bound fic phosphate.The demonstrated eukaryotic fic domain AMPylation activity suggests that the VopS effector has exploited a novel host posttranslational modification. Fic domain-related structures give insight to the AMPylation active site and to the VopS fic domain interaction with its host GTPase target. These results suggest that fic, doc, and AvrB stem from a common ancestor that has evolved to AMPylate protein substrates.

The effectiveness of arbuscular-mycorrhizal fungi and Aspergillus niger or Phanerochaete chrysosporium treated organic amendments from olive residues upon plant growth in a semi-arid degraded soil.

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Medina, A; Roldán, A; Azcón, R

2010-12-01

Arbuscular mycorrhizal (AM) fungi and a residue from dry olive cake (DOC) supplemented with rock phosphate (RP) and treated with either Aspergillus niger (DOC-A) or Phanerochaete chrysosporium (DOC-P), were assayed in a natural, semi-arid soil using Trifolium repens or Dorycnium pentaphyllum plants. The effects of the AM fungi and/or DOC-A were compared with P-fertilisation (P) over eleven successive harvests to evaluate the persistence of the effectiveness of the treatments. The biomass of dually-treated plants after four successive harvests was greater than that obtained for non-treated plants or those receiving the AM inoculum or DOC-A treatments after eleven yields. The AM inoculation was critical for obtaining plant growth benefit from the application of fermented DOC-A residue. The abilities of the treatments to prevent plant drought stress were also assayed. Drought-alleviating effects were evaluated in terms of plant growth, proline and total sugars concentration under alternative drought and re-watering conditions (8th and 9th harvests). The concentrations of both compounds in plant biomass increased under drought when DOC-A amendment and AM inoculation were employed together: they reinforced the plant drought-avoidance capabilities and anti-oxidative defence. Water stress was less compensated in P-fertilised than in DOC-A-treated plants. DOC-P increased D. pentaphyllum biomass, shoot P content, nodule number and AM colonisation, indicating the greater DOC-transforming ability of P. chrysosporium compared to A. niger. The lack of AM colonisation and nodulation in this soil was compensated by the application of DOC-P, particularly with AM inoculum. The management of natural resources (organic amendments and soil microorganisms) represents an important strategy that assured the growth, nutrition and plant establishment in arid, degraded soils, preventing the damage that arises from limited water and nutrient supply. Copyright © 2010 Elsevier Ltd. All rights

Distinct expression of alkaline phosphatase activity in epilimnetic bacteria: Implication for persistent DOC consumption in a P-limited reservoir

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Tseng, Y.; Kao, S.; Shiah, F.

2013-12-01

In a P-deficient system, P availability usually controls the microbial activity and thus the ecosystem function. Thingstad et al. (1997) first addressed a 'Malfunctioning Microbial-loop' theory, which stated that low bacterial production (BP) caused by insufficient nutrient supply would result in DOC accumulation in an oligotrophic ecosystem. In this study we re-examined the theory by conducting seasonal patterns and correlations among soluble reactive phosphate (SRP) and DOC, microbial abundances (picocyanobacteria, bacteria, and heterotrophic nanoflagellate; HNF) and activities (primary production, bacterial production, and alkaline phosphatase activity; APA) coupled with enzyme-labeled fluorescence (ELF) assays on bacterioplankton in a subtropical reservoir sharing the common features, nitrate-replete and P-deficient, with most natural freshwater system during Oct 2007-Oct 2008. Persistently high APA was recorded during most of time, implying that the system was P-deficient. Size fractionated APA and ELF assay revealed that bacteria were the major APA contributor. However, significantly low epilimnion DOC was recorded during the stratified summer season accompanying with high BP and APA as well as high PP, implying that heterotrophic bacteria can well sustain in P-deficient system by utilizing DOP to rapidly lower down DOC under relatively high PP. Such findings oppose the 'Malfunctioning Microbial-loop' theory. On the other hand, strong epilimnetic DOC accumulation occurred in Oct 2007 under low light and low PP condition accompanying with high abundance of HNF, implying that HNF grazing may contribute to a certain degree of DOC accumulation. Correlation matrix supported our suggestions. This study testified the DOC dynamics in P-deficient ecosystem are tightly coupled with the source (PP and grazing) and sink (BP). We also suggested that in SRP-limited freshwater systems bacteria are capable of breaking down autochthonous DOC to reduce the chance of DOC

Validation of SDM-Q-Doc Questionnaire to measure shared decision-making physician's perspective in oncology practice.

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Calderon, C; Ferrando, P J; Carmona-Bayonas, A; Lorenzo-Seva, U; Jara, C; Beato, C; García, T; Ramchandani, A; Castelo, B; Muñoz, M M; Garcia, S; Higuera, O; Mangas-Izquierdo, M; Jimenez-Fonseca, P

2017-11-01

The aim of this study was to analyze the psychometric properties of the Shared Decision-Making Questionnaire-Physician version (SDM-Q-Doc) in a sample of medical oncologists who provide adjuvant treatment to patients with non-metastatic resected cancer and the correlations between the total SDM-Q-Doc score and physician satisfaction with the information provided. Prospective, observational and multicenter study in which 32 medical oncologists and 520 patients were recruited. The psychometric properties, dimensionality, and factor structure of the SDM-Q-Doc were assessed. Exploratory factor analyses suggested that the most likely solution was two-dimensional, with two correlated factors: one factor regarding information and another one about treatment. Confirmatory factor analysis based on cross-validation showed that the fitted two-dimensional solution provided the best fit to the data. Reliability analyses revealed good accuracy for the derived scores, both total and sub-scale, with estimates ranging from 0.81 to 0.89. The results revealed significant correlations between the total SDM-Q-Doc score and physician satisfaction with the information provided (p Doc showed good psychometric properties and could be a helpful tool that examines physician's perspective of SDM and as an indicator of quality and satisfaction in patients with cancer.

Optical properties of Colored Dissolved Organic Matter (CDOM) on the East Siberian shelf

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Semiletov, I. P.; Pugach, S.; Pipko, I.

2015-12-01

The Great Siberian Rivers integrate meteorological and hydrological changes in their watersheds and play a significant role in the physical and biogeochemical regime of the Arctic Ocean. Given the magnitude of Siberian Arctic dissolved organic matter (DOM) export and the uncertain extent to which it is degraded to greenhouse gases, intensified studies to better quantify and understand this large carbon pool and processes acting on it are urgently needed. The East Siberian Arctic shelf is characterized by the highest rate of coastal erosion and significant volume of the riverine discharge which derived terrigenous DOM in the Arctic Ocean. DOM plays a significant role in freshwater and marine aquatic ecosystems including its effects on nutrients and carbon cycling. The colored fraction of DOM, CDOM, directly affects the quantity and spectral quality of available light, thereby impaction both primary production and UV exposure in aquatic ecosystems. Since 2003 we measure CDOM in the East Siberian Arctic Seas (ESAS) in situ using the WETStar fluorometer which doesn't require prefiltration of sample. Combined analysis of CDOM and DOC data obtained at near-annual basis in (2003-2011) demonstrate a high degree of correlation between these parameters. For all the measured samples taken during the ISSS cruises (2003, 2004, 2005, 2008, 2011), there is an overall linear relationship between DOC concentration, CDOM, and salinity. Here we report the spatial-time variability of river-borne DOM in the ESAS using CDOM as a proxy parameter. Higher absorption coefficients (a254), spectral slope parameter over range 275-295 nm (S275-295) and CDOM concentrations reflect the dominant contribution of terrigenous DOM. It is shown that the attenuation light coefficient in the shallow ESAS is mostly determined by riverine CDOM.

Cross-regional prediction of long-term trajectory of stream water DOC response to climate change

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H. Laudon; J.M. Buttle; S.K. Carey; J.J. McDonnell; K.J. McGuire; J. Seibert; J. Shanley; C. Soulsby; D. Tetzlaff

2012-01-01

There is no scientific consensus about how dissolved organic carbon (DOC) in surface waters is regulated. Here we combine recent literature data from 49 catchments with detailed stream and catchment process information from nine well established research catchments at mid- to high latitudes to examine the question of how climate controls stream water DOC. We show for...

Resuspension of polychlorinated biphenyl-contaminated field sediment: release to the water column and determination of site-specific K DOC.

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Friedman, Carey L; Lohmann, Rainer; Burgess, Robert M; Perron, Monique M; Cantwell, Mark G

2011-02-01

Sediments from the New Bedford Harbor (NBH) U.S. Environmental Protection Agency (U.S. EPA) Superfund site (Massachusetts, USA), contaminated with polychlorinated biphenyls (PCBs), were resuspended under different water column redox conditions: untreated, oxidative, and reductive. The partitioning of PCBs to the overlying water column was measured with polyethylene samplers and compared to partitioning without resuspension. Greater concentrations of total aqueous (freely dissolved + dissolved organic carbon (DOC)-associated) PCBs were found in all resuspended treatments for PCBs with mid-range K(OW)s, but no difference was observed in total aqueous concentrations among different redox conditions. The magnitude of increased concentrations depended on resuspension time and congener K(OW), but ranged from approximately one to eight times those found without resuspension. In a parallel study, DOC was flocculated and removed from smaller-scale NBH sediment resuspensions. In situ K(DOC)s were determined and used to calculate freely dissolved and DOC-associated fractions of the increase in total aqueous PCB concentrations due to resuspension. The importance of DOC-associated PCBs increased with increasing K(OW). In situ K(DOC)s were approximately one to two orders of magnitude greater than those calculated with a commonly used linear free energy relationship (LFER). The present study demonstrates that resuspension of contaminated sediments releases PCBs to the water column, of which a significant fraction are DOC-associated (e.g., 28, 65, and 90% for PCBs 28, 66, and 110, respectively). Results also imply that site-specific PCB K(DOC)s are superior to those calculated with generic LFERs. © 2010 SETAC.

Long-term environmental drivers of DOC fluxes: Linkages between management, hydrology and climate in a subtropical coastal estuary

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Regier, Peter; Briceño, Henry; Jaffé, Rudolf

2016-12-01

Urban and agricultural development of the South Florida peninsula has disrupted historic freshwater flow in the Everglades, a hydrologically connected ecosystem stretching from central Florida to the Gulf of Mexico, USA. Current system-scale restoration efforts aim to restore natural hydrologic regimes to reestablish pre-drainage ecosystem functioning through increased water availability, quality and timing. Aquatic transport of carbon in this ecosystem, primarily as dissolved organic carbon (DOC), plays a critical role in biogeochemical cycling and food-web dynamics, and will be affected both by water management policies and climate change. To better understand DOC dynamics in South Florida estuaries and how hydrology, climate and water management may affect them, 14 years of monthly data collected in the Shark River estuary were used to examine DOC flux dynamics in a broader environmental context. Multivariate statistical methods were applied to long-term datasets for hydrology, water quality and climate to untangle the interconnected environmental drivers that control DOC export at monthly and annual scales. DOC fluxes were determined to be primarily controlled by hydrology but also by seasonality and long-term climate patterns and episodic weather events. A four-component model (salinity, rainfall, inflow, Atlantic Multidecadal Oscillation) capable of predicting DOC fluxes (R2 = 0.84, p water management and salinity.

WaterOnto: Ontology of Context-Aware Grid-Based Riverine Water Management System

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Muhammad Hussain Mughal

2017-06-01

Full Text Available The management of riverine water always remains a big challenge, because the volatility of water flow creates hurdles to determine the exact time and quantity of water flowing in rivers and available for daily use. The volatile water caused by various water sources and irregular flow pattern generates different kinds of challenges for management. Distribution of flow of water in irrigation network affects the relevant community in either way. In the monsoon seasons, river belt community high risk of flood, while far living community suffering drought. Contemplating this situation, we have developed an ontology for context-aware information representation of riverine water management system abetting the visualization and proactive planning for the complex real-time situation. The purpose of this WaterOnto is to improve river water management and enable for efficient use of this precious natural resource. This would also be helpful to save the extra water being discharged in sea & non-irrigational areas, and magnitude and location of water leakage. We conceptualized stakeholder and relevant entities. We developed a taxonomy of irrigation system concepts in machine process able structure. Being woven these hierarchies together we developed a detailed conceptualization of river flow that helps us to manage the flow of water and enable to extract danger situation.

Lacustrine-fluvial interactions in Australia's Riverine Plains

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Kemp, Justine; Pietsch, Timothy; Gontz, Allen; Olley, Jon

2017-06-01

Climatic forcing of fluvial systems has been a pre-occupation of geomorphological studies in Australia since the 1940s. In the Riverine Plain, southeastern Australia, the stable tectonic setting and absence of glaciation have combined to produce sediment loads that are amongst the lowest in the world. Surficial sediments and landforms exceed 140,000 yr in age, and geomorphological change recorded in the fluvial, fluvio-lacustrine and aeolian features have provided a well-studied record of Quaternary environmental change over the last glacial cycle. The region includes the Willandra Lakes, whose distinctive lunette lakes preserve a history of water-level variations and ecological change that is the cornerstone of Australian Quaternary chronostratigraphy. The lunette sediments also contain an ancient record of human occupation that includes the earliest human fossils yet found on the Australian continent. To date, the lake-level and palaeochannel records in the Lachlan-Willandra system have not been fully integrated, making it difficult to establish the regional significance of hydrological change. Here, we compare the Willandra Lakes environmental record with the morphology and location of fluvial systems in the lower Lachlan. An ancient channel belt of the Lachlan, Willandra Creek, acted as the main feeder channel to Willandra Lakes before channel avulsion caused the lakes to dry out in the late Pleistocene. Electromagnetic surveys, geomorphological and sedimentary evidence are used to reconstruct the evolution of the first new channel belt following the avulsion. Single grain optical dating of floodplain sediments indicates that sedimentation in the new Middle Billabong Palaeochannel had commenced before 18.4 ± 1.1 ka. A second avulsion shifted its upper reaches to the location of the present Lachlan River by 16.2 ± 0.9 ka. The timing of these events is consistent with palaeohydrological records reconstructed from Willandra Lakes and with the record of

Transport and degradation of perchlorate in deep vadose zone: implications from direct observations during bioremediation treatment

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O. Dahan

2017-08-01

Full Text Available An in situ bioremediation experiment of a deep vadose zone ( ∼  40 m contaminated with a high concentration of perchlorate (> 25 000 mg L−1 was conducted through a full-scale field operation. Favourable environmental conditions for microbiological reduction of perchlorate were sought by infiltrating an electron donor-enriched water solution using drip irrigation underlying an airtight sealing liner. A vadose zone monitoring system (VMS was used for real-time tracking of the percolation process, the penetration depth of dissolved organic carbon (DOC, and the variation in perchlorate concentration across the entire soil depth. The experimental conditions for each infiltration event were adjusted according to insight gained from data obtained by the VMS in previous stages. Continuous monitoring of the vadose zone indicated that in the top 13 m of the cross section, perchlorate concentration is dramatically reduced from thousands of milligrams per litre to near-detection limits with a concurrent increase in chloride concentration. Nevertheless, in the deeper parts of the vadose zone (< 17 m, perchlorate concentration increased, suggesting its mobilization down through the cross section. Breakthrough of DOC and bromide at different depths across the unsaturated zone showed limited migration capacity of biologically consumable carbon and energy sources due to their enhanced biodegradation in the upper soil layers. Nevertheless, the increased DOC concentration with concurrent reduction in perchlorate and increase in the chloride-to-perchlorate ratio in the top 13 m indicate partial degradation of perchlorate in this zone. There was no evidence of improved degradation conditions in the deeper parts where the initial concentrations of perchlorate were significantly higher.

Degradation of amoxicillin, ampicillin and cloxacillin antibiotics in aqueous solution by the UV/ZnO photocatalytic process

International Nuclear Information System (INIS)

Elmolla, Emad S.; Chaudhuri, Malay

2010-01-01

The study examined the effect of operating conditions (zinc oxide concentration, pH and irradiation time) of the UV/ZnO photocatalytic process on degradation of amoxicillin, ampicillin and cloxacillin in aqueous solution. pH has a great effect on amoxicillin, ampicillin and cloxacillin degradation. The optimum operating conditions for complete degradation of antibiotics in an aqueous solution containing 104, 105 and 103 mg/L amoxicillin, ampicillin and cloxacillin, respectively were: zinc oxide 0.5 g/L, irradiation time 180 min and pH 11. Under optimum operating conditions, complete degradation of amoxicillin, ampicillin and cloxacillin occurred and COD and DOC removal were 23.9 and 9.7%, respectively. The photocatalytic reactions under optimum conditions approximately followed a pseudo-first order kinetics with rate constant (k) 0.018, 0.015 and 0.029 min -1 for amoxicillin, ampicillin and cloxacillin, respectively. UV/ZnO photocatalysis can be used for amoxicillin, ampicillin and cloxacillin degradation in aqueous solution.

Dynamics of dissolved organic carbon (DOC) through stormwater basins designed for groundwater recharge in urban area: Assessment of retention efficiency.

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Mermillod-Blondin, Florian; Simon, Laurent; Maazouzi, Chafik; Foulquier, Arnaud; Delolme, Cécile; Marmonier, Pierre

2015-09-15

Managed aquifer recharge (MAR) has been developed in many countries to limit the risk of urban flooding and compensate for reduced groundwater recharge in urban areas. The environmental performances of MAR systems like infiltration basins depend on the efficiency of soil and vadose zone to retain stormwater-derived contaminants. However, these performances need to be finely evaluated for stormwater-derived dissolved organic matter (DOM) that can affect groundwater quality. Therefore, this study examined the performance of MAR systems to process DOM during its transfer from infiltration basins to an urban aquifer. DOM characteristics (fluorescent spectroscopic properties, biodegradable and refractory fractions of dissolved organic carbon -DOC-, consumption by micro-organisms during incubation in slow filtration sediment columns) were measured in stormwater during its transfer through three infiltration basins during a stormwater event. DOC concentrations sharply decreased from surface to the aquifer for the three MAR sites. This pattern was largely due to the retention of biodegradable DOC which was more than 75% for the three MAR sites, whereas the retention of refractory DOC was more variable and globally less important (from 18% to 61% depending on MAR site). Slow filtration column experiments also showed that DOC retention during stormwater infiltration through soil and vadose zone was mainly due to aerobic microbial consumption of the biodegradable fraction of DOC. In parallel, measurements of DOM characteristics from groundwaters influenced or not by MAR demonstrated that stormwater infiltration increased DOC quantity without affecting its quality (% of biodegradable DOC and relative aromatic carbon content -estimated by SUVA254-). The present study demonstrated that processes occurring in soil and vadose zone of MAR sites were enough efficient to limit DOC fluxes to the aquifer. Nevertheless, the enrichments of DOC concentrations measured in groundwater below

Landscape scale controls on the vascular plant component of dissolved organic carbon across a freshwater delta

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Eckard, Robert S.; Hernes, Peter J.; Bergamaschi, Brian A.; Stepanauskas, Ramunas; Kendall, Carol

2007-01-01

Lignin phenol concentrations and compositions were determined on dissolved organic carbon (DOC) extracts (XAD resins) within the Sacramento-San Joaquin River Delta (the Delta), the tidal freshwater portion of the San Francisco Bay Estuary, located in central California, USA. Fourteen stations were sampled, including the following habitats and land-use types: wetland, riverine, channelized waterway, open water, and island drains. Stations were sampled approximately seasonally from December, 1999 through May, 2001. DOC concentrations ranged from 1.3 mg L-1 within the Sacramento River to 39.9 mg L-1 at the outfall from an island drain (median 3.0 mg L-1), while lignin concentrations ranged from 3.0 μL-1 within the Sacramento River to 111 μL-1 at the outfall from an island drain (median 11.6 μL-1). Both DOC and lignin concentrations varied significantly among habitat/land-use types and among sampling stations. Carbon-normalized lignin yields ranged from 0.07 mg (100 mg OC)-1 at an island drain to 0.84 mg (100 mg OC)-1 for a wetland (median 0.36 mg (100 mg OC)-1), and also varied significantly among habitat/land-use types. A simple mass balance model indicated that the Delta acted as a source of lignin during late autumn through spring (10-83% increase) and a sink for lignin during summer and autumn (13-39% decrease). Endmember mixing models using S:V and C:V signatures of landscape scale features indicated strong temporal variation in sources of DOC export from the Delta, with riverine source signatures responsible for 50% of DOC in summer and winter, wetland signatures responsible for 40% of DOC in summer, winter, and late autumn, and island drains responsible for 40% of exported DOC in late autumn. A significant negative correlation was observed between carbon-normalized lignin yields and DOC bioavailability in two of the 14 sampling stations. This study is, to our knowledge, the first to describe organic vascular plant DOC sources at the level of localized

Solar ultraviolet photodegradation of DOC may stimulate freshwater food webs

NARCIS (Netherlands)

Lange, de H.J.; Morris, D.P.; Williamson, C.E.

2003-01-01

The UV component in solar radiation increased the availability of DOC for bacterial growth, and led to an increase in bacterial and bacterivore abundance in laboratory plankton cultures. UV radiation may thus stimulate ecosystem productivity by increasing dissolved organic carbon lability and

Evaluation of Dissolved Inorganic and Organic Carbon Concentrations (DIC, DOC and Their Isotopic Compositions (δ 13C-DOC, δ 13C-DIC in Water Resources of the Karde Catchment (North of Mashhad

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Hossein Mohammadzadeh

2015-07-01

Full Text Available In this paper, the variations of dissolved inorganic and organic carbon (DIC, DOC concentrations and their isotopic compositions (δ13C- DIC, δ13C- DOC were evaluated in both surface and ground water resources in the Karde catchment area (with an area of about 547 Km2, located in the North of Mashhad. To identify the sources of the dissolved carbon (DIC and DOC, samples were collected in June 2011 from surface and ground water resources (river, dam’s lake, springs, wells, and Qanat and from depths of 1, 5, 10, 15, and 20 meters of Karde dam lakeat a point located near the dam outlet. Field parameters (T, EC, and TDS were measured during sampling. All measurements were performed in the G.G. Hatch Stable Isotope Laboratory at the University of Ottawa, Canada. The concentrations and isotopic compositions of DIC and DOC were determined using TCA and CF-IRMS instruments, respectively. Based on the results obt 1-دانشیار،مرکزتحقیقاتآبهایزیرزمینی متآب،دانشکدهعلوم،دانشگاهفردوسی مشهد،،مشهد، ایران 2- دانشجوی کارشناسی ارشدهیدروژئولوژی، مرکزتحقیقاتآبهایزیرزمینی متآب،دانشکده علوم،دانشگاهفردوسیمشهد، مشهد، ایران *نویسنده مسئول، پست الکترونیکی:mohammadzadeh@um.ac.ir           ained, the average values of DIC are 54.1 mg/l and 66.8 mg/l in the surface and ground water resources in the Karde catchment area, respectively; the average values of DOC are 2.2 mg/l and 0.45 mg/l; the average values of δ13C-DIC are -7‰ and -11 ‰; and the average values of δ13C-DOC are -31.6‰ and -29.5 ‰, respectively. In general, the concentrations of DIC, DOC, and their isotopic compositions (δ13C-DIC, δ13C-DOC are different in the various water resources (surface and ground water in the catchment and the major source of dissolved carbon in the catchment area is

Effects of ozone as a stand-alone and coagulation-aid treatment on the reduction of trihalomethanes precursors from high DOC and hardness water.

Science.gov (United States)

Sadrnourmohamadi, Mehrnaz; Gorczyca, Beata

2015-04-15

This study investigates the effect of ozone as a stand-alone and coagulation aid on the removal of dissolved organic carbon (DOC) from the water with a high level of DOC (13.8 mgL(-1)) and calcium hardness (270 mgL(-1)) CaCO3. Natural water collected from the Assiniboine River (Manitoba, Canada) was used in this study. Effectiveness of ozone treatment was evaluated by measurement of DOC, DOC fractions, UV254, and trihalomethane formation potential (THMFP). Additionally, zeta potential and dissolved calcium concentration were measured to discern the mechanism of ozone reactions. Results indicated that 0.8 mg O3/mg DOC ozone stand-alone can cause up to 86% UV254 reduction and up to 27% DOC reduction. DOC fractionation results showed that ozone can change the composition of DOC in the water samples, converting the hydrophobic fractions into hydrophilic ones and resulting in the reduction of THMFP. Also, ozone caused a decrease in particle stability and dissolved calcium concentration. These simultaneous ozonation effects caused improved water flocculation and enhanced removal of DOC. This resulted in reduction of the coagulant dosage when ozone doses higher than 0.2 mg O3/mg DOC were applied prior to coagulation with ferric sulfate. Also, pre-ozonation-coagulation process achieved preferential THMFP removal for all of the ozone doses tested (0-0.8 mg O3/mg DOC), leading to a lower specific THMFP in pre-ozonated-coagulated waters than in the corresponding ozonated waters. Copyright © 2015 Elsevier Ltd. All rights reserved.

ICF-DOC: the ICF dedicated checklist for evaluating functioning and disability in people with disorders of consciousness.

Science.gov (United States)

Leonardi, Matilde; Covelli, Venusia; Giovannetti, Ambra M; Raggi, Alberto; Sattin, Davide

2014-09-01

Clinicians need a comprehensive description of patients' functioning state to capture the complex interaction between symptoms and environmental factors, and to determine the actual level of functioning in patients in a vegetative state or a minimally conscious state. The aim of this study is to develop an International Classification of Functioning, Disability, and Health (ICF) checklist for patients with disorders of consciousness (DOC) so as to capture and describe, with a tailored list of categories, the most common health, disability, and functioning issues of adult patients with DOC. The WHO ICF checklist was used as a basis for collecting data. This was an observational, cross-sectional, multicenter study conducted in 69 Italian centers. Specific methodological procedures were used to identify the most appropriate categories for DOC patients to be added to or deleted from the ICF checklist so as to develop the ICF-DOC checklist. A total of 566 adult patients were enrolled: 398 in a vegetative state and 168 in a minimally conscious state. A total of 127 ICF categories reached the threshold of 20% concerning the presence of a problem: 37 categories from the body functions chapter, 13 from the body structures chapter, 46 from the activities and participations chapter, and 31 from the environmental factors chapter. ICF categories identified in this study can be useful guidelines for clinicians and researchers to collect data on functioning and disability of adult patients with DOC. The new ICF-DOC checklist allows monitoring of the effects of interventions on functional areas and possible changes in each patient in follow-up studies.

Atmospheric nutrient inputs to the northern levantine basin from a long-term observation: sources and comparison with riverine inputs

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M. Koçak

2010-12-01

Full Text Available Aerosol and rainwater samples have been collected at a rural site located on the coastline of the Eastern Mediterranean, Erdemli, Turkey between January 1999 and December 2007. Riverine sampling was carried out at five Rivers (Ceyhan, Seyhan, Göksu, Berdan and Lamas draining into the Northeastern Levantine Basin (NLB between March 2002 and July 2007. Samples have been analyzed for macronutrients of phosphate, silicate, nitrate and ammonium (PO₄³⁻, Si_diss, NO₃⁻ and NH₄⁺. Phosphate and silicate in aerosol and rainwater showed higher and larger variations during the transitional period when air flows predominantly originate from North Africa and Middle East/Arabian Peninsula. Deficiency of alkaline material have been found to be the main reason of the acidic rain events whilst high pH values (>7 have been associated with high Si_diss concentrations due to sporadic dust events. In general, lowest nitrate and ammonium concentrations in aerosol and rainwater have been associated with air flow from the Mediterranean Sea. Comparison of atmospheric with riverine fluxes demonstrated that DIN and PO₄³⁻ fluxes to NLB have been dominated by atmosphere (~90% and ~60% respectively whereas the input of Si was mainly derived from riverine runoff (~90%. N/P ratios in the atmospheric deposition (233; riverine discharge (28 revealed that NLB receives excessive amounts of DIN and this unbalanced P and N inputs may provoke even more phosphorus deficiency. Observed molar Si/N ratio suggested Si limitation relative to nitrogen might cause a switch from diatom dominated communities to non-siliceous populations particularly at coastal NLB.

Linear alkylbenzenes in riverine runoff of the Pearl River Delta (China) and their application as anthropogenic molecular markers in coastal environments

International Nuclear Information System (INIS)

Ni Honggang; Lu Fenghui; Wang Jizhong; Guan Yufeng; Luo Xianlin; Zeng, Eddy Y.

2008-01-01

The average concentrations of ΣLABs (sum of C 10 -C 13 -LABs) in runoff samples collected from the eight major riverine outlets of the Pearl River Delta (PRD) of China ranged from 1.4 to 6124 ng/L in the dissolved phase and from 0.01 to 11.4 μg/g dry weight in the particulate phase during March 2005-February 2006. The annual riverine flux of ΣLABs from the PRD to the coastal ocean was estimated at approximately 14 tons/yr. The inventories of ΣLABs in agricultural lands of Guangdong Province ranged from 313 to 1825 kg/yr. The early and late rice fields were the major sink of LABs, accounting for approximately 68% of total LABs inventory in agricultural lands. The social-economically estimated annual discharge of LABs from household detergents in the PRD was ∼696 tons/yr, more than an order of magnitude higher than that estimated from field measurements (about 14 tons/yr), which was attributed to several factors. - Occurrence of LABs in riverine runoff of the Pearl River Delta (China) was examined

Speciation of Se and DOC in soil solution and their relation to Se bioavailability.

Science.gov (United States)

Weng, Liping; Vega, Flora Alonso; Supriatin, Supriatin; Bussink, Wim; Van Riemsdijk, Willem H

2011-01-01

A 0.01 M CaCl(2) extraction is often used to asses the bioavailability of plant nutrients in soils. However, almost no correlation was found between selenium (Se) in the soil extraction and Se content in grass. The recently developed anion Donnan membrane technique was used to analyze chemical speciation of Se in the 0.01 M CaCl(2) extractions of grassland soils and fractionation of DOC (dissolved organic carbon). The results show that most of Se (67-86%) in the extractions (15 samples) are colloidal-sized Se. Only 13-34% of extractable Se are selenate, selenite and small organic Se (<1 nm). Colloidal Se is, most likely, Se bound to or incorporated in colloidal-sized organic matter. The dominant form of small Se compounds (selenate, selenite/small organic compounds) depends on soil. A total of 47-85% of DOC is colloidal-sized and 15-53% are small organic molecules (<1 nm). In combination with soluble S (sulfur) and/or P (phosphor), concentration of small DOC can explain most of the variability of Se content in grass. The results indicate that mineralization of organic Se is the most important factor that controls Se availability in soils. Competition with sulfate and phosphate needs to be taken into account. Further research is needed to verify if concentration of small DOC is a good indicator of mineralization of soil organic matter.

Adsorption and bioadsorption of granular activated carbon (GAC) for dissolved organic carbon (DOC) removal in wastewater.

Science.gov (United States)

Xing, W; Ngo, H H; Kim, S H; Guo, W S; Hagare, P

2008-12-01

In this study, the performances of GAC adsorption and GAC bioadsorption in terms of dissolved organic carbon (DOC) removal were investigated with synthetic biologically treated sewage effluent (BTSE), synthetic primary treated sewage effluent (PTSE), real BTSE and real PTSE. The main aims of this study are to verify and compare the efficiency of DOC removal by GAC (adsorption) and acclimatized GAC (bioadsorption). The results indicated that the performance of bioadsorption was significantly better than that of adsorption in all cases, showing the practical use of biological granular activated carbon (BGAC) in filtration process. The most significance was observed at a real PTSE with a GAC dose of 5g/L, having 54% and 96% of DOC removal by adsorption and bioadsorption, respectively. In addition, it was found that GAC adsorption equilibrium was successfully predicted by a hybrid Langmuir-Freundlich model whilst integrated linear driving force approximation (LDFA)+hybrid isotherm model could describe well the adsorption kinetics. Both adsorption isotherm and kinetic coefficients determined by these models will be useful to model the adsorption/bioadsorption process in DOC removal of BGAC filtration system.

Using Project-Based Learning and Google Docs to Support Diversity

Science.gov (United States)

Leh, Amy

2014-01-01

A graduate course, ETEC543 ("Technology and Learning I"), was revised to better serve increasing new student population, international students, in an academic program. Project-based learning, Google Docs, and instructional strategies fostering diversity and critical thinking were incorporated into the course redesign. Observations,…

Toward a quantitative and empirical dissolved organic carbon budget for the Gulf of Maine, a semienclosed shelf sea

Science.gov (United States)

Balch, William; Huntington, Thomas G.; Aiken, George R.; Drapeau, David; Bowler, Bruce; Lubelczyk, Laura; Butler, Kenna D.

2016-01-01

A time series of organic carbon export from Gulf of Maine (GoM) watersheds was compared to a time series of biological, chemical, bio-optical, and hydrographic properties, measured across the GoM between Yarmouth, NS, Canada, and Portland, ME, U.S. Optical proxies were used to quantify the dissolved organic carbon (DOC) and particulate organic carbon in the GoM. The Load Estimator regression model applied to river discharge data demonstrated that riverine DOC export (and its decadal variance) has increased over the last 80 years. Several extraordinarily wet years (2006–2010) resulted in a massive pulse of chromophoric dissolved organic matter (CDOM; proxy for DOC) into the western GoM along with unidentified optically scattering material (Time lags between DOC discharge and its appearance in the GoM increased with distance from the river mouths. Algae were also a significant source of DOC but not CDOM. Gulf-wide algal primary production has decreased. Increases in precipitation and DOC discharge to the GoM are predicted over the next century.

Global and Regional Patterns in Riverine Fish Species Richness: A Review

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Thierry Oberdorff

2011-01-01

Full Text Available We integrate the respective role of global and regional factors driving riverine fish species richness patterns, to develop a synthetic model of potential mechanisms and processes generating these patterns. This framework allows species richness to be broken down into different components specific to each spatial extent and to establish links between these components and the processes involved. This framework should help to answer the questions that are currently being asked by society, including the effects of species invasions, habitat loss, or fragmentation and climate change on freshwater biodiversity.

A systematic examination of the relationships between CDOM and DOC in inland waters in China

OpenAIRE

K. Song; Y. Zhao; Y. Zhao; Z. Wen; C. Fang; C. Fang; Y. Shang

2017-01-01

Chromophoric dissolved organic matter (CDOM) plays a vital role in the biogeochemical cycle in aquatic ecosystems. The relationship between CDOM and dissolved organic carbon (DOC) has been investigated, and this significant relationship lays the foundation for the estimation of DOC using remotely sensed imagery data. The current study examined samples from freshwater lakes, saline lakes, rivers and streams, urban water bodies, and ice-covered lakes in China for tracking t...

HECTD3 Mediates an HSP90-Dependent Degradation Pathway for Protein Kinase Clients

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Zhaobo Li

2017-06-01

Full Text Available Inhibition of the ATPase cycle of the HSP90 chaperone promotes ubiquitylation and proteasomal degradation of its client proteins, which include many oncogenic protein kinases. This provides the rationale for HSP90 inhibitors as cancer therapeutics. However, the mechanism by which HSP90 ATPase inhibition triggers ubiquitylation is not understood, and the E3 ubiquitin ligases involved are largely unknown. Using a siRNA screen, we have identified components of two independent degradation pathways for the HSP90 client kinase CRAF. The first requires CUL5, Elongin B, and Elongin C, while the second requires the E3 ligase HECTD3, which is also involved in the degradation of MASTL and LKB1. HECTD3 associates with HSP90 and CRAF in cells via its N-terminal DOC domain, which is mutationally disrupted in tumor cells with activated MAP kinase signaling. Our data implicate HECTD3 as a tumor suppressor modulating the activity of this important oncogenic signaling pathway.

An evaluation of organic substance fraction removal during ion exchange with Miex-DOC resin.

Science.gov (United States)

Wolska, Małgorzata

2015-07-01

In this study, the usefulness of Miex-DOC resin in eliminating organic substances and their fractions from water sources for drinking water was evaluated. The objects of study were samples from three surface water sources and one infiltration water source taken at water treatment plants before treatment in technical conditions. In particular, the effectiveness of removing biodegradable and non-biodegradable fractions as a function of resin dosages and water-resin contact times was evaluated. The ion exchange process with the Miex-DOC resin achieved a high effectiveness in removing aromatic non-biodegradable organic substances, and therefore a reduction in UV254 absorbance. The biodegradable fraction is much less susceptible to removal yet its removal effectiveness allows for a significant reduction in hazards connected with secondary microorganism development. The results of this study indicate the possibility of using ion exchange with the Miex-DOC resin for effective removal of disinfection by-product precursors.

Deconstructing the Effects of Flow on DOC, Nitrate, and Major Ion Interactions Using a High-Frequency Aquatic Sensor Network

Science.gov (United States)

Koenig, L. E.; Shattuck, M. D.; Snyder, L. E.; Potter, J. D.; McDowell, W. H.

2017-12-01

Streams provide a physical linkage between land and downstream river networks, delivering solutes derived from multiple catchment sources. We analyzed high-frequency time series of stream solutes to characterize the timing and magnitude of major ion, nutrient, and organic matter transport over event, seasonal, and annual timescales as well as to assess whether nitrate (NO3-) and dissolved organic carbon (DOC) transport are coupled in catchments, which would be expected if they are subject to similar biogeochemical controls throughout the watershed. Our data set includes in situ observations of NO3-, fluorescent dissolved organic matter (DOC proxy), and specific conductance spanning 2-4 years in 10 streams and rivers across New Hampshire, including observations of nearly 700 individual hydrologic events. We found a positive response of NO3- and DOC to flow in forested streams, but watershed development led to a negative relationship between NO3- and discharge, and thus a decoupling of the overall NO3- and DOC responses to flow. On event and seasonal timescales, NO3- and DOC consistently displayed different behaviors. For example, in several streams, FDOM yield was greatest during summer storms while NO3- yield was greatest during winter storms. Most streams had generalizable storm NO3- and DOC responses, but differences in the timing of NO3- and DOC transport suggest different catchment sources. Further, certain events, including rain-on-snow and summer storms following dry antecedent conditions, yielded disproportionate NO3- responses. High-frequency data allow for increased understanding of the processes controlling solute variability and will help reveal their responses to changing climatic regimes.

Spatial and temporal distribution of singlet oxygen in Lake Superior.

Science.gov (United States)

Peterson, Britt M; McNally, Ann M; Cory, Rose M; Thoemke, John D; Cotner, James B; McNeill, Kristopher

2012-07-03

A multiyear field study was undertaken on Lake Superior to investigate singlet oxygen ((1)O(2)) photoproduction. Specifically, trends within the lake were examined, along with an assessment of whether correlations existed between chromophoric dissolved organic matter (CDOM) characteristics and (1)O(2) production rates and quantum yields. Quantum yield values were determined and used to estimate noontime surface (1)O(2) steady-state concentrations ([(1)O(2)](ss)). Samples were subdivided into three categories based on their absorbance properties (a300): riverine, river-impacted, or open lake sites. Using calculated surface [(1)O(2)](ss), photochemical half-lives under continuous summer sunlight were calculated for cimetidine, a pharmaceutical whose reaction with (1)O(2) has been established, to be on the order of hours, days, and a week for the riverine, river-impacted, and open lake waters, respectively. Of the CDOM properties investigated, it was found that dissolved organic carbon (DOC) and a300 were the best parameters for predicting production rates of [(1)O(2)](ss). For example, given the correlations found, one could predict [(1)O(2)](ss) within a factor of 4 using a300 alone. Changes in the quantum efficiency of (1)O(2) production upon dilution of river water samples with lake water samples demonstrated that the CDOM found in the open lake is not simply diluted riverine organic matter. The open lake pool was characterized by low absorption coefficient, low fluorescence, and low DOC, but more highly efficient (1)O(2) production and predominates the Lake Superior system spatially. This study establishes that parameters that reflect the quantity of CDOM (e.g., a300 and DOC) correlate with (1)O(2) production rates, while parameters that characterize the absorbance spectrum (e.g., spectral slope coefficient and E2:E3) correlate with (1)O(2) production quantum yields.

Direct DOC and nitrate determination in water using dual pathlength and second derivative UV spectrophotometry.

Science.gov (United States)

Causse, Jean; Thomas, Olivier; Jung, Aude-Valérie; Thomas, Marie-Florence

2017-01-01

UV spectrophotometry is largely used for water and wastewater quality monitoring. The measurement/estimation of specific and aggregate parameters such as nitrate and dissolved organic carbon (DOC) is possible with UV spectra exploitation, from 2 to multi wavelengths calibration. However, if nitrate determination from UV absorbance is known, major optical interferences linked to the presence of suspended solids, colloids or dissolved organic matter limit the relevance of UV measurement for DOC assessment. A new method based on UV spectrophotometric measurement of raw samples (without filtration) coupling a dual pathlength for spectra acquisition and the second derivative exploitation of the signal is proposed in this work. The determination of nitrate concentration is carried out from the second derivative of the absorbance at 226 nm corresponding at the inflexion point of nitrate signal decrease. A short optical pathlength can be used considering the strong absorption of nitrate ion around 210 nm. For DOC concentration determination the second derivative absorbance at 295 nm is proposed after nitrate correction. Organic matter absorbing slightly in the 270-330 nm window, a long optical pathlength must be selected in order to increase the sensitivity. The method was tested on several hundred of samples from small rivers of two agricultural watersheds located in Brittany, France, taken during dry and wet periods. The comparison between the proposed method and the standardised procedures for nitrate and DOC measurement gave a good adjustment for both parameters for ranges of 2-100 mg/L NO3 and 1-30 mg/L DOC. Copyright © 2016 Elsevier Ltd. All rights reserved.

Land management as a factor controlling dissolved organic carbon release from upland peat soils 2: changes in DOC productivity over four decades.

Science.gov (United States)

Clutterbuck, B; Yallop, A R

2010-11-15

Increasing DOC concentrations in surface waters have been observed across parts of Europe and North America over the past few decades. Most proposed explanations for these widespread trends invoke climate change or reductions in sulphate deposition. However, these factors do not seem apposite to explain either the fine-scale (within kilometres) or regional-scale spatial variation in DOC concentrations observed across the UK. We have reconstructed DOC concentrations and land use for one North Pennine and five South Pennine catchments (UK), located in three discrete areas, over the last four decades. Rainfall, temperature and sulphate deposition data, where available, were also collated and the potential influence of these factors on surface water DOC concentrations was assessed. Four of the six catchments examined showed highly significant (pDOC (hDOC) concentrations in drainage waters over the period 1990-2005. Changes in temperature and sulphate deposition may explain 20-30% of this trend in these four catchments. However, the rapid expansion of new moorland burn on blanket peat can explain a far greater degree (>80%) of the change in hDOC. Far smaller increases in hDOC (10-18%) were identified for the two remaining catchments. These two sites experienced similar changes in sulphur deposition and temperature to those that had seen largest increases in DOC, but contained little or no moorland burn management on blanket peat. This study shows that regional-scale factors undoubtedly underlie some of the recent observed increases in drainage humic coloured DOC. However, changes in land management, in this case the extensive use of fire management on blanket peat, are a far more important driver of increased hDOC release from upland catchments in some parts of the UK. It suggests that the recent rapid increase in the use of burning on blanket peat moorland has implications for ecosystem services and carbon budgets. Copyright © 2010 Elsevier B.V. All rights reserved.

Degradation of soil-sorbed trichloroethylene by stabilized zero valent iron nanoparticles: Effects of sorption, surfactants, and natural organic matter

Energy Technology Data Exchange (ETDEWEB)

Zhang, Man [Auburn University, Auburn, Alabama; He, Feng [ORNL; Zhao, Dongye [Auburn University, Auburn, Alabama; Hao, Xiaodi [Beijing University of Civil Engineering and Architecture

2011-01-01

Zero valent iron (ZVI) nanoparticles have been studied extensively for degradation of chlorinated solvents in the aqueous phase, and have been tested for in-situ remediation of contaminated soil and groundwater. However, little is known about its effectiveness for degrading soil-sorbed contaminants. This work studied reductive dechlorination of trichloroethylene (TCE) sorbed in two model soils (a potting soil and Smith Farm soil) using carboxymethyl cellulose (CMC) stabilized Fe-Pd bimetallic nanoparticles. Effects of sorption, surfactants and dissolved organic matter (DOC) were determined through batch kinetic experiments. While the nanoparticles can effectively degrade soil-sorbed TCE, the TCE degradation rate was strongly limited by desorption kinetics, especially for the potting soil which has a higher organic matter content of 8.2%. Under otherwise identical conditions, {approx}44% of TCE sorbed in the potting soil was degraded in 30 h, compared to {approx}82% for Smith Farm soil (organic matter content = 0.7%). DOC from the potting soil was found to inhibit TCE degradation. The presence of the extracted SOM at 40 ppm and 350 ppm as TOC reduced the degradation rate by 34% and 67%, respectively. Four prototype surfactants were tested for their effects on TCE desorption and degradation rates, including two anionic surfactants known as SDS (sodium dodecyl sulfate) and SDBS (sodium dodecyl benzene sulfonate), a cationic surfactant hexadecyltrimethylammonium (HDTMA) bromide, and a non-ionic surfactant Tween 80. All four surfactants were observed to enhance TCE desorption at concentrations below or above the critical micelle concentration (cmc), with the anionic surfactant SDS being most effective. Based on the pseudo-first-order reaction rate law, the presence of 1 x cmc SDS increased the reaction rate by a factor of 2.5 when the nanoparticles were used for degrading TCE in a water solution. SDS was effective for enhancing degradation of TCE sorbed in Smith Farm

Molecular transformation and degradation of refractory dissolved organic matter in the Atlantic and Southern Ocean

Science.gov (United States)

Lechtenfeld, Oliver J.; Kattner, Gerhard; Flerus, Ruth; McCallister, S. Leigh; Schmitt-Kopplin, Philippe; Koch, Boris P.

2014-02-01

More than 90% of the global ocean dissolved organic carbon (DOC) is refractory, has an average age of 4000-6000 years and a lifespan from months to millennia. The fraction of dissolved organic matter (DOM) that is resistant to degradation is a long-term buffer in the global carbon cycle but its chemical composition, structure, and biochemical formation and degradation mechanisms are still unresolved. We have compiled the most comprehensive molecular dataset of 197 Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS) analyses from solid-phase extracted marine DOM covering two major oceans, the Atlantic sector of the Southern Ocean and the East Atlantic Ocean (ranging from 50° N to 70° S). Molecular trends and radiocarbon dating of 34 DOM samples (comprising Δ14C values from -229‰ to -495‰) were combined to model an integrated degradation rate for bulk DOC resulting in a predicted age of >24 ka for the most persistent DOM fraction. First order kinetic degradation rates for 1557 mass peaks indicate that numerous DOM molecules cycle on timescales much longer than the turnover of the bulk DOC pool (estimated residence times of up to ~100 ka) and the range of validity of radiocarbon dating. Changes in elemental composition were determined by assigning molecular formulae to the detected mass peaks. The combination of residence times with molecular information enabled modelling of the average elemental composition of the slowest degrading fraction of the DOM pool. In our dataset, a group of 361 molecular formulae represented the most stable composition in the oceanic environment (“island of stability”). These most persistent compounds encompass only a narrow range of the molecular elemental ratios H/C (average of 1.17 ± 0.13), and O/C (average of 0.52 ± 0.10) and molecular masses (360 ± 28 and 497 ± 51 Da). In the Weddell Sea DOC concentrations in the surface waters were low (46.3 ± 3.3 μM) while the organic radiocarbon was significantly

The "DOC" screen: Feasible and valid screening for depression, Obstructive Sleep Apnea (OSA) and cognitive impairment in stroke prevention clinics.

Science.gov (United States)

Swartz, Richard H; Cayley, Megan L; Lanctôt, Krista L; Murray, Brian J; Cohen, Ashley; Thorpe, Kevin E; Sicard, Michelle N; Lien, Karen; Sahlas, Demetrios J; Herrmann, Nathan

2017-01-01

Post-stroke Depression, Obstructive sleep apnea (OSA) and Cognitive impairment ("DOC") are associated with greater mortality, worse recovery and poorer quality of life. Best practice recommendations endorse routine screening for each condition; yet, all are under-assessed, diagnosed and treated. We seek to determine the feasibility and validity of an integrated tool ("DOC" screen) to identify stroke clinic patients at high-risk of depression, OSA, and cognitive impairment. All consecutive new referrals to a regional Stroke Prevention Clinic who were English-speaking and non-aphasic were eligible to be screened. Time for screen completion was logged. DOC screen results were compared to the neuropsychological battery and polysomnogram assessments using a modified receiver operator characteristic and area under the curve analysis. Data is reported to conform to STARD guidelines. 1503 people were screened over 2 years. 89% of eligible patients completed the screen in 5 minutes or less (mean 4.2 minutes), less than half the time it takes to complete the Montreal Cognitive Assessment (MoCA). 437 people consented to detailed testing. Of those, 421 completed the Structured Clinical Interview for Depression within 3 months of screening, 387 completed detailed neuropsychological testing within 3 months, and 88 had overnight polysomnograms. Screening scores combined with demographic variables (age, sex, education, body mass index), had excellent validity compared to gold standard diagnoses: DOC-Mood AUC 0.90; DOC-Apnea AUC 0.80; DOC-Cog AUC 0.81. DOC screen scores can reliably categorize patients in to low-, intermediate- or high-risk groups for further action and can do so with comparable accuracy to more time-consuming screens. Systematic screening of depression, obstructive sleep apnea, and cognitive impairment in 5 minutes or less is feasible and valid in a high volume stroke clinic using the DOC screen. The DOC screen may facilitate improved identification and treatment

Multiple sources driving the organic matter dynamics in two contrasting tropical mangroves

International Nuclear Information System (INIS)

Ray, R.; Shahraki, M.

2016-01-01

In this study, we have selected two different mangroves based on their geological, hydrological and climatological variations to investigate the origin (terrestrial, phytobenthos derived, and phytoplankton derived) of dissolved organic carbon (DOC), particulate organic carbon (POC) in the water column and the sedimentary OC using elemental ratios and stable isotopes. Qeshm Island, representing the Iranian mangroves received no attention before this study in terms of DOC, POC biogeochemistry and their sources unlike the Sundarbans (Indian side), the world's largest mangrove system. Slightly higher DOC concentrations in the Iranian mangroves were recorded in our field campaigns between 2011 and 2014, compared to the Sundarbans (315 ± 25 μM vs. 278 ± 42 μM), owing to the longer water residence times, while 9–10 times greater POC concentration (303 ± 37 μM, n = 82) was linked to both suspended load (345 ± 104 mg L"− "1) and high algal production. Yearlong phytoplankton bloom in the mangrove-lined Persian Gulf was reported to be the perennial source of both POC and DOC contributing 80–86% to the DOC and 90–98% to the POC pool. Whereas in the Sundarbans, riverine input contributed 50–58% to the DOC pool and POC composition was regulated by the seasonal litter fall, river discharge and phytoplankton production. Algal derived organic matter (microphytobenthos) represented the maximum contribution (70–76%) to the sedimentary OC at Qeshm Island, while mangrove leaf litters dominated the OC pool in the Indian Sundarbans. Finally, hydrographical settings (i.e. riverine transport) appeared to be the determinant factor in differentiating OM sources in the water column between the dry and wet mangroves. - Highlights: • Sources of OC have been identified and compared between two contrasting mangroves. • Phytoplankton dominated the DOC and POC pool in the Iranian mangroves. • River input contributed half of the total DOC and part of POC in the Indian

Multiple sources driving the organic matter dynamics in two contrasting tropical mangroves

Energy Technology Data Exchange (ETDEWEB)

Ray, R., E-mail: raghab.ray@gmail.com [Institut Universitaire Européen de la Mer, UBO, UMR 6539 LEMAR, rue Dumont dUrville, 29280 Plouzane (France); Leibniz Center for Tropical Marine Ecology, Fahrenheitstr. 6, 28359 Bremen (Germany); Shahraki, M. [Leibniz Center for Tropical Marine Ecology, Fahrenheitstr. 6, 28359 Bremen (Germany); Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, Am Handelshafen 12, 27570 Bremerhaven (Germany)

2016-11-15

In this study, we have selected two different mangroves based on their geological, hydrological and climatological variations to investigate the origin (terrestrial, phytobenthos derived, and phytoplankton derived) of dissolved organic carbon (DOC), particulate organic carbon (POC) in the water column and the sedimentary OC using elemental ratios and stable isotopes. Qeshm Island, representing the Iranian mangroves received no attention before this study in terms of DOC, POC biogeochemistry and their sources unlike the Sundarbans (Indian side), the world's largest mangrove system. Slightly higher DOC concentrations in the Iranian mangroves were recorded in our field campaigns between 2011 and 2014, compared to the Sundarbans (315 ± 25 μM vs. 278 ± 42 μM), owing to the longer water residence times, while 9–10 times greater POC concentration (303 ± 37 μM, n = 82) was linked to both suspended load (345 ± 104 mg L{sup −} {sup 1}) and high algal production. Yearlong phytoplankton bloom in the mangrove-lined Persian Gulf was reported to be the perennial source of both POC and DOC contributing 80–86% to the DOC and 90–98% to the POC pool. Whereas in the Sundarbans, riverine input contributed 50–58% to the DOC pool and POC composition was regulated by the seasonal litter fall, river discharge and phytoplankton production. Algal derived organic matter (microphytobenthos) represented the maximum contribution (70–76%) to the sedimentary OC at Qeshm Island, while mangrove leaf litters dominated the OC pool in the Indian Sundarbans. Finally, hydrographical settings (i.e. riverine transport) appeared to be the determinant factor in differentiating OM sources in the water column between the dry and wet mangroves. - Highlights: • Sources of OC have been identified and compared between two contrasting mangroves. • Phytoplankton dominated the DOC and POC pool in the Iranian mangroves. • River input contributed half of the total DOC and part of POC in

Abundance, stable isotopic composition, and export fluxes of DOC, POC, and DIC from the Lower Mississippi River during 2006–2008

Science.gov (United States)

Cai, Yihua; Guo, Laodong; Wang, Xuri; Aiken, George R.

2015-01-01

Sources, abundance, isotopic compositions, and export fluxes of dissolved inorganic carbon (DIC), dissolved and colloidal organic carbon (DOC and COC), and particulate organic carbon (POC), and their response to hydrologic regimes were examined through monthly sampling from the Lower Mississippi River during 2006–2008. DIC was the most abundant carbon species, followed by POC and DOC. Concentration and δ13C of DIC decreased with increasing river discharge, while those of DOC remained fairly stable. COC comprised 61 ± 3% of the bulk DOC with similar δ13C abundances but higher percentages of hydrophobic organic acids than DOC, suggesting its aromatic and diagenetically younger status. POC showed peak concentrations during medium flooding events and at the rising limb of large flooding events. While δ13C-POC increased, δ15N of particulate nitrogen decreased with increasing discharge. Overall, the differences in δ13C between DOC or DIC and POC show an inverse correlation with river discharge. The higher input of soil organic matter and respired CO2 during wet seasons was likely the main driver for the convergence of δ13C between DIC and DOC or POC, whereas enhanced in situ primary production and respiration during dry seasons might be responsible for their isotopic divergence. Carbon export fluxes from the Mississippi River were estimated to be 13.6 Tg C yr−1 for DIC, 1.88 Tg C yr−1 for DOC, and 2.30 Tg C yr−1 for POC during 2006–2008. The discharge-normalized DIC yield decreased during wet seasons, while those of POC and DOC increased and remained constant, respectively, implying variable responses in carbon export to the increasing discharge.

The first insight into the metabolite profiling of grapes from three Vitis vinifera L. cultivars of two controlled appellation (DOC) regions.

Science.gov (United States)

Teixeira, António; Martins, Viviana; Noronha, Henrique; Eiras-Dias, José; Gerós, Hernâni

2014-03-10

The characterization of the metabolites accumulated in the grapes of specific cultivars grown in different climates is of particular importance for viticulturists and enologists. In the present study, the metabolite profiling of grapes from the cultivars, Alvarinho, Arinto and Padeiro de Basto, of two Portuguese Controlled Denomination of Origin (DOC) regions (Vinho Verde and Lisboa) was investigated by gas chromatography-coupled time-of-flight mass spectrometry (GC-TOF-MS) and an amino acid analyzer. Primary metabolites, including sugars, organic acids and amino acids, and some secondary metabolites were identified. Tartaric and malic acids and free amino acids accumulated more in grapes from vines of the DOC region of Vinho Verde than DOC Lisboa, but a principal component analysis (PCA) plot showed that besides the DOC region, the grape cultivar also accounted for the variance in the relative abundance of metabolites. Grapes from the cultivar, Alvarinho, were particularly rich in malic acid and tartaric acids in both DOC regions, but sucrose accumulated more in the DOC region of Vinho Verde.

The First Insight into the Metabolite Profiling of Grapes from Three Vitis vinifera L. Cultivars of Two Controlled Appellation (DOC Regions

Directory of Open Access Journals (Sweden)

António Teixeira

2014-03-01

Full Text Available The characterization of the metabolites accumulated in the grapes of specific cultivars grown in different climates is of particular importance for viticulturists and enologists. In the present study, the metabolite profiling of grapes from the cultivars, Alvarinho, Arinto and Padeiro de Basto, of two Portuguese Controlled Denomination of Origin (DOC regions (Vinho Verde and Lisboa was investigated by gas chromatography-coupled time-of-flight mass spectrometry (GC-TOF-MS and an amino acid analyzer. Primary metabolites, including sugars, organic acids and amino acids, and some secondary metabolites were identified. Tartaric and malic acids and free amino acids accumulated more in grapes from vines of the DOC region of Vinho Verde than DOC Lisboa, but a principal component analysis (PCA plot showed that besides the DOC region, the grape cultivar also accounted for the variance in the relative abundance of metabolites. Grapes from the cultivar, Alvarinho, were particularly rich in malic acid and tartaric acids in both DOC regions, but sucrose accumulated more in the DOC region of Vinho Verde.

The effects of riverine physical complexity on anadromy and genetic diversity in steelhead or rainbow trout Oncorhynchus mykiss around the Pacific Rim.

Science.gov (United States)

McPhee, M V; Whited, D C; Kuzishchin, K V; Stanford, J A

2014-07-01

This study explored the relationship between riverine physical complexity, as determined from remotely sensed metrics, and anadromy and genetic diversity in steelhead or rainbow trout Oncorhynchus mykiss. The proportion of anadromy (estimated fraction of individuals within a drainage that are anadromous) was correlated with riverine complexity, but this correlation appeared to be driven largely by a confounding negative relationship between drainage area and the proportion of anadromy. Genetic diversity decreased with latitude, was lower in rivers with only non-anadromous individuals and also decreased with an increasing ratio of floodplain area to total drainage area. Anadromy may be less frequent in larger drainages due to the higher cost of migration associated with reaches farther from the ocean, and the negative relationship between genetic diversity and floodplain area may be due to lower effective population size resulting from greater population fluctuations associated with higher rates of habitat turnover. Ultimately, the relationships between riverine physical complexity and migratory life history or genetic diversity probably depend on the spatial scale of analysis. © 2014 The Fisheries Society of the British Isles.

Designing protected areas to conserve riverine biodiversity: Lessons from a hypothetical redesign of the Kruger National Park

CSIR Research Space (South Africa)

Roux, JR

2008-01-01

Full Text Available that are largely contained within this park. Physical river types, fish species and invertebrate families or genera were used as surrogates of riverine biodiversity. Conservation planning software was used to select an optimal set of planning units to represent...

Determination of dissolved inorganic carbon (DIC) and dissolved organic carbon (DOC) in freshwaters by sequential injection spectrophotometry with on-line UV photo-oxidation

International Nuclear Information System (INIS)

Tue-Ngeun, Orawan; Sandford, Richard C.; Jakmunee, Jaroon; Grudpan, Kate; McKelvie, Ian D.; Worsfold, Paul J.

2005-01-01

An automated sequential injection (SI) method for the determination of dissolved inorganic carbon (DIC) and dissolved organic carbon (DOC) in freshwaters is presented. For DIC measurement on-line sample acidification (sulphuric acid, pH 2 which subsequently diffused through a PTFE membrane into a basic, cresol red acceptor stream. The CO 2 increased the concentration of the acidic form of the cresol red indicator, with a resultant decrease in absorbance at 570 nm being directly proportional to DIC concentration. DIC + DOC was determined after on-line sample irradiation (15 W low power UV lamp) coupled with acid-peroxydisulfate digestion, with the subsequent detection of CO 2 as described above. DOC was determined by subtraction of DIC from (DIC + DOC). Analytical figures of merit were linear ranges of 0.05-5.0 mg C L -1 for both DIC and DIC + DOC, with typical R.S.D.s of less than 7% (0.05 mg C L -1 -5.3% for DIC and 6.6% for DIC + DOC; 4.0 mg C L -1 -2.6% for DIC and 2.4% for DIC + DOC, n = 3) and an LOD (blank + 3S.D.) of 0.05 mg C L -1 . Sample throughput for the automated system was 8 h -1 for DIC and DOC with low reagent consumption (acid/peroxydisulfate 200 μL per DIC + DOC analysis). A range of model carbon compounds and Tamar River (Plymouth, UK) samples were analysed for DIC and DOC and the results showed good agreement with a high temperature catalytic oxidation (HTCO) reference method (t-test, P = 0.05)

Determination of dissolved inorganic carbon (DIC) and dissolved organic carbon (DOC) in freshwaters by sequential injection spectrophotometry with on-line UV photo-oxidation

Energy Technology Data Exchange (ETDEWEB)

Tue-Ngeun, Orawan [Department of Chemistry, Faculty of Science, Chiang Mai University, Chiang Mai 50200 (Thailand); Sandford, Richard C. [School of Earth, Ocean and Environmental Sciences, University of Plymouth, Drakes Circus, Plymouth PL4 8AA (United Kingdom)]. E-mail: rsandford@plymouth.ac.uk; Jakmunee, Jaroon [Department of Chemistry, Faculty of Science, Chiang Mai University, Chiang Mai 50200 (Thailand); Grudpan, Kate [Department of Chemistry, Faculty of Science, Chiang Mai University, Chiang Mai 50200 (Thailand); McKelvie, Ian D. [Water Studies Centre, School of Chemistry, Monash University, P.O. Box 23, Clayton Campus, Vic. 3800 (Australia); Worsfold, Paul J. [School of Earth, Ocean and Environmental Sciences, University of Plymouth, Drakes Circus, Plymouth PL4 8AA (United Kingdom)

2005-12-04

An automated sequential injection (SI) method for the determination of dissolved inorganic carbon (DIC) and dissolved organic carbon (DOC) in freshwaters is presented. For DIC measurement on-line sample acidification (sulphuric acid, pH < 2), converted DIC to CO{sub 2} which subsequently diffused through a PTFE membrane into a basic, cresol red acceptor stream. The CO{sub 2} increased the concentration of the acidic form of the cresol red indicator, with a resultant decrease in absorbance at 570 nm being directly proportional to DIC concentration. DIC + DOC was determined after on-line sample irradiation (15 W low power UV lamp) coupled with acid-peroxydisulfate digestion, with the subsequent detection of CO{sub 2} as described above. DOC was determined by subtraction of DIC from (DIC + DOC). Analytical figures of merit were linear ranges of 0.05-5.0 mg C L{sup -1} for both DIC and DIC + DOC, with typical R.S.D.s of less than 7% (0.05 mg C L{sup -1}-5.3% for DIC and 6.6% for DIC + DOC; 4.0 mg C L{sup -1}-2.6% for DIC and 2.4% for DIC + DOC, n = 3) and an LOD (blank + 3S.D.) of 0.05 mg C L{sup -1}. Sample throughput for the automated system was 8 h{sup -1} for DIC and DOC with low reagent consumption (acid/peroxydisulfate 200 {mu}L per DIC + DOC analysis). A range of model carbon compounds and Tamar River (Plymouth, UK) samples were analysed for DIC and DOC and the results showed good agreement with a high temperature catalytic oxidation (HTCO) reference method (t-test, P = 0.05)

Increased dissolved organic carbon (DOC) in Central European streams is driven by reductions in ionic strength rather than climate change or decreasing acidity.

Science.gov (United States)

Hruska, Jakub; Krám, Pavel; McDowell, William H; Oulehle, Filip

2009-06-15

Temporal trends in DOC concentration and flux were investigated at two geochemically distinct forested catchments in western Czech Republic. Mean discharge-weighted DOC concentrations averaged 18.8 mg L(-1) at the acidic Lysina catchment, and 20.2 mg L(-1) at base-rich and well-buffered Pluhuv Bor. Between 1993 and 2007 DOC in streamwater increased significantly in both catchments: the mean annual increase was 0.42 mg L(-1) yr(-1) (p DOC were correlated with only modest increases in stream pH in both catchments, but large declines in ionic strength (IS), that resulted from declining atmospheric deposition. Neither catchment has undergone changes in soil-water pH, yet DOC concentrations tripled in the soil-water of both catchments. We conclude that changes in ionic strength of soil-water and streamwater, rather than acidity, are the primary drivers of changes in streamwater DOC in this region. Temperature, precipitation and discharge show no statistically significant trends during the study period, suggesting that climate change has played no role in the changes in DOC that we have observed.

TOC/DOC: "It Has Changed the Way I Do Science".

Science.gov (United States)

Douglas, Kimberly; Roth, Dana L.

1997-01-01

Describes a user-based automated service developed at the California Institute of Technology that combines access to journal article databases with an in-house document delivery system. TOC/DOC (Tables of Contents/Document Delivery) has undergone a conceptual change from a catalog of locally-held journal articles to a broader, more retrospective…

Polycyclic aromatic hydrocarbons in upstream riverine runoff of the Pearl River Delta, China: An assessment of regional input sources

International Nuclear Information System (INIS)

Zhang Kai; Liang Bo; Wang Jizhong; Guan Yufeng; Zeng, Eddy Y.

2012-01-01

Water samples collected from upstream tributaries of the Pearl River Delta (PRD) and from locations within the PRD (South China) were analyzed for 27 polycyclic aromatic hydrocarbons (PAHs). Average concentrations (aqueous plus particulate) of total 27 PAHs (Σ 27 PAH), 16 priority PAHs designated by the United States Environmental Protection Agency (USEPA) except naphthalene (Σ 15 PAH), and the seven carcinogenic PAHs (Σ 7 PAH) classified by the USEPA were 260 ± 410, 130 ± 310, and 15 ± 12 ng/L, respectively. Riverine PAHs were predominantly generated from coal and vegetation combustion, coke production, vehicle exhausts, and petroleum residues, accounting for 28%, 25%, 22% and 21%, respectively, on average. Upstream riverine fluxes of Σ 27 PAH and Σ 15 PAH amounted to 38.9 and 12.9 tons/year, respectively. The net contributions of Σ 27 PAH and Σ 15 PAH from sources within the PRD were estimated at 21.4 and 21.0 tons/year, respectively. - Highlights: ► Upstream PAH levels were lower than downstream PAHs and pose low ecological risk. ► Riverine PAHs are predominantly pyrogenic. ► Parent PAHs in Pearl River are mainly derived from within the PRD. ► The 15 priority PAHs were mainly generated within the Pearl River Delta. - The 15 priority PAHs are mainly generated within the PRD while the other 12 PAHs from upstream areas.

Experimental study on the particulate matter and nitrogenous compounds from diesel engine retrofitted with DOC+CDPF+SCR

Science.gov (United States)

Zhang, Yunhua; Lou, Diming; Tan, Piqiang; Hu, Zhiyuan

2018-03-01

The increasingly stringent emission regulations will mandate the retrofit of after-treatment devices for in-use diesel vehicles, in order to reduce their substantial particulate matter and nitrogen oxides (NOX) emissions. In this paper, a combination of DOC (diesel oxidation catalyst), CDPF (catalytic diesel particulate filter) and SCR (selective catalytic reduction) retrofit for a heavy-duty diesel engine was employed to perform experiment on the engine test bench to evaluate the effects on the particulate matter emissions including particle number (PN), particle mass (PM), particle size distributions and nitrogenous compounds emissions including NOX, nitrogen dioxide (NO2)/NOX, nitrous oxide (N2O) and ammonia (NH3) slip. In addition, the urea injection was also of our concern. The results showed that the DOC+CDPF+SCR retrofit almost had no adverse effect on the engine power and fuel consumption. Under the test loads, the upstream DOC and CDPF reduced the PN and PM by an average of 91.6% and 90.9%, respectively. While the downstream SCR brought about an average decrease of 85% NOX. Both PM and NOX emission factors based on this retrofit were lower than China-Ⅳ limits (ESC), and even lower than China-Ⅴ limits (ESC) at medium and high loads. The DOC and CDPF changed the particle size distributions, leading to the increase in the proportion of accumulation mode particles and the decrease in the percentage of nuclear mode particles. This indicates that the effect of DOC and CDPF on nuclear mode particles was better than that of accumulation mode ones. The upstream DOC could increase the NO2/NOX ratio to 40%, higher NO2/NOX ratio improved the efficiency of CDPF and SCR. Besides, the N2O emission increased by an average of 2.58 times after the retrofit and NH3 slip occurred with the average of 26.7 ppm. The rate of urea injection was roughly equal to 8% of the fuel consumption rate. The DOC+CDPF+SCR retrofit was proved a feasible and effective measurement in terms

Viscosity changes of riparian water controls diurnal fluctuations of stream-flow and DOC concentration

Science.gov (United States)

Schwab, Michael; Klaus, Julian; Pfister, Laurent; Weiler, Markus

2015-04-01

Diurnal fluctuations in stream-flow are commonly explained as being triggered by the daily evapotranspiration cycle in the riparian zone, leading to stream flow minima in the afternoon. While this trigger effect must necessarily be constrained by the extent of the growing season of vegetation, we here show evidence of daily stream flow maxima in the afternoon in a small headwater stream during the dormant season. We hypothesize that the afternoon maxima in stream flow are induced by viscosity changes of riparian water that is caused by diurnal temperature variations of the near surface groundwater in the riparian zone. The patterns were observed in the Weierbach headwater catchment in Luxembourg. The catchment is covering an area of 0.45 km2, is entirely covered by forest and is dominated by a schistous substratum. DOC concentration at the outlet of the catchment was measured with the field deployable UV-Vis spectrometer spectro::lyser (scan Messtechnik GmbH) with a high frequency of 15 minutes over several months. Discharge was measured with an ISCO 4120 Flow Logger. During the growing season, stream flow shows a frequently observed diurnal pattern with discharge minima in the afternoon. During the dormant season, a long dry period with daily air temperature amplitudes of around 10 ° C occurred in March and April 2014, with discharge maxima in the afternoon. The daily air temperature amplitude led to diurnal variations in the water temperature of the upper 10 cm of the riparian zone. Higher riparian water temperatures cause a decrease in water viscosity and according to the Hagen-Poiseuille equation, the volumetric flow rate is inversely proportional to viscosity. Based on the Hagen-Poiseuille equation and the viscosity changes of water, we calculated higher flow rates of near surface groundwater through the riparian zone into the stream in the afternoon which explains the stream flow maxima in the afternoon. With the start of the growing season, the viscosity

Effect of moisture and temperature variation on DOC release from a peatland: conflicting results from laboratory, field and historical data analysis.

Science.gov (United States)

Preston, Michael D; Eimers, M Catherine; Watmough, Shaun A

2011-03-01

Peatlands are large repositories of atmospheric carbon and concern has been raised over the stability of this carbon store because increasing dissolved organic carbon (DOC) concentrations have been observed in peatland drainage waters. A number of potential causes have been proposed in the literature, and conflicting results among studies conducted at different spatial and temporal scales suggest that the methodological approach may be an important confounding factor. The objective of this study was to determine the influence of moisture and temperature on DOC release from a south-central Ontario peatland during the fall (a major export period) following three commonly used approaches: laboratory microcosms, an intensive field study and analysis of long-term data (1980-2008). The effect of variations in temperature and moisture differed among microcosm, field study and analysis of the long-term record. Water content was important at the microcosm scale as DOC concentration and aromaticity increased with peat water-saturation. Drought caused a decrease in DOC concentration and pH, and an increase in sulphate and base cation concentrations. In contrast, the field study indicated that DOC concentration was strongly associated with temperature, and weakly correlated (negatively) with stream discharge. Average fall DOC concentration (but not export) increased over the 29 year record, and was correlated with fall discharge and precipitation (negative) and summer precipitation and fall stream pH (positive). As no common strong predictor of fall DOC was found at three scales of investigation at a single, well-studied site, it may be unreasonable to expect to identify a universal driver behind the widespread increase in DOC concentration. Copyright © 2010 Elsevier B.V. All rights reserved.

Impacts of habitat degradation and stream spatial location on biodiversity in a disturbed riverine landscape

DEFF Research Database (Denmark)

Göthe, Emma; Wiberg-Larsen, Peter; Kristensen, Esben Astrup

2015-01-01

gradients. We used macrophyte, fish and macroinvertebrate data from Danish lowland streams to investigate whether (1) high connectivity in reaches situated in lower parts of the stream network (downstream sites) generates high α-diversity, while dispersal limitation and high habitat heterogeneity across......The ongoing degradation of freshwater habitat quality and subsequent losses of biodiversity is alarming. One key to successful freshwater management is to understand how different scale-dependent diversity components (i.e. γ-, α- and β-diversity) change along present-day anthropogenic impact...... the more isolated upper reaches (headwater sites) generate high β-diversity, (2) γ-, α- and β- diversity decrease with increasing hydromorphological impact and (3) high connectivity in downstream reaches buffers against impacts on biodiversity. Results showed that α-diversity was higher in downstream sites...

Targeted delivery of miR-200c/DOC to inhibit cancer stem cells and cancer cells by the gelatinases-stimuli nanoparticles.

Science.gov (United States)

Liu, Qin; Li, Ru-Tian; Qian, Han-Qing; Wei, Jia; Xie, Li; Shen, Jie; Yang, Mi; Qian, Xiao-Ping; Yu, Li-Xia; Jiang, Xi-Qun; Liu, Bao-Rui

2013-09-01

Cancer stem cells (CSCs) are recently discovered as vital obstacles for the successful cancer therapy. Emerging evidences suggest that miR-200c functions as an effective CSCs inhibitor and can restore sensitivity to microtubule-targeting drugs. In the present work, the intelligent gelatinases-stimuli nanoparticles (NPs) was set up to co-deliver miR-200c and docetaxel (DOC) to verify their synergetic effects on inhibition of CSCs and non-CSC cancer cells. After tumor cells were treated with miR-200c NPs, miR-200c and its targeted gene class III beta-tubulin (TUBB3)TUBB3 expression were evaluated. The effects of miR-200c/DOC NPs on tumor cell viability, migration and invasion as well as the expression of E-cadherin and CD44 were studied. The antitumor effects of miR-200c/DOC NPs were compared with DOC NPs in xenograft gastric cancer mice. Moreover, the residual tumors after treatment were subcutaneously seeded into nude mice to further investigate the effective maintenance of NPs. We found that the gelatinases-stimuli NPs facilitated miR-200c into cells, achieving sustained miR-200c expression in tumor cells during 9 days. The miR-200c/DOC NPs significantly enhanced cytotoxicity of DOC, possibly by decreasing TUBB3 level, and reversing EMT. The miR-200c NPs achieved high levels of in vivo accumulation and long retention in gastric cancer xenografts after intravenous administration. The miR-200c/DOC NPs prominently suppressed in vivo tumor growth with elevated miR-200c and E-cadherin levels and down-regulated TUBB3 and CD44 expressions. When the residual tumors after miR-200c/DOC NPs treatment were re-transplanted into nude mice, the tumors demonstrated the slowest growth speed. The miR-200c/DOC NPs may provide a promising modality for co-delivery of nucleic acid and drugs to simultaneously inhibit CSCs and non-CSC cancer cells. Copyright © 2013 Elsevier Ltd. All rights reserved.

Biochar feedstock and pyrolysis temperature effects on leachate: DOC characteristics and nitrate losses from a Brazilian Cerrado Arenosol mixed with agricultural waste biochars.

Science.gov (United States)

Speratti, Alicia B; Johnson, Mark S; Sousa, Heiriane Martins; Dalmagro, Higo J; Couto, Eduardo Guimarães

2018-04-01

Dissolved organic carbon (DOC) leached from Brazilian Cerrado Arenosols can lead to carbon (C) losses and lower soil fertility, while excessive nutrient, e.g. nitrate (NO 3 - ), leaching can potentially cause water contamination. As biochar has been shown to stabilize C and retain soil nutrients, a greenhouse experiment was conducted to test different biochars' contributions to DOC and NO 3 - leaching from a sandy soil. Biochars were made from four local agricultural waste feedstocks (cotton residue, swine manure, eucalyptus sawmill residue, sugarcane filtercake) pyrolysed at 400, 500 and 600 °C. Biochar was mixed with soil at 5% weight in pots and maize seeds planted. Leachate was collected weekly for six weeks and analyzed for DOC and NO 3 - concentrations, while fluorescence spectroscopy with parallel factor analysis (PARAFAC) was used to interpret DOC characteristics. Cotton and swine manure biochar treatments had higher DOC and NO 3 - losses than eucalyptus biochar, filtercake biochar, and control treatments. Cotton and swine manure biochar treatments at high temperatures lost mostly terrestrial, humified DOC, while swine manure, filtercake, and eucalyptus biochars at low temperatures lost mostly labile, microbially-derived DOC. Through the practical use of fluorescence spectroscopy, our study identified filtercake and eucalyptus biochars as most promising for retaining DOC and NO 3 - in a Cerrado Arenosol, potentially reducing stable C and nutrient losses. Copyright © 2018 Elsevier Ltd. All rights reserved.

Ecological significance of riverine gravel bars in regulated river reaches below dams

Science.gov (United States)

Ock, G.; Takemon, Y.; Sumi, T.; Kondolf, G. M.

2012-12-01

A gravel bar has been recognized as ecologically significant in that they provide simplified habitat with topographical, hydrological and thermo-chemical diversity, while enhancing material exchanges as interfaces laterally between aquatic and terrestrial habitats, and vertically between surface and subsurface waters. During past several decades, regulated rivers below dams have been loss of a number of the geomorphological features due to sediment starvation by upstream dams, accompanied by a subsequent degradation of their ecological functions. Despite a growing concern for gravel bar management recognizing its importance in recovering riverine ecosystem services, the ecological roles of gravel bars have not been assessed enough from the empirical perspectives of habitat diversity and organic matter interactions. In this study, we investigate the 'natural filtering effects' for reducing lentic plankton and contaminants associated with self-purification, and 'physicochemical habitat complexity' of gravel bars, focusing on reach-scaled gravel bars in rivers located in three different countries; First is the Uji River in central Japan, where there has been a loss of gravel bars in the downstream reaches since an upstream dam was constructed in 1965; second is the Tagliamento River in northeast Italy, which shows morphologically intact braided bar channels by natural flooding events and sediment supply; third is the Trinity River in the United States (located in northern California), the site of ongoing restoration efforts for creating new gravel bars through gravel augmentation and channel rehabilitation activities. We traced the downstream changes in particulate organic matter (POM) trophic sources (composed of allochthonous terrestrial inputs, autochthonous instream production and lentic plankton from dam outflows) in order to evaluate the roles of the geomorphological features in tailwater ecosystem food-resources shifting. We calculated suspended POM

Marine and giant viruses as indicators of a marine microbial community in a riverine system

OpenAIRE

Dann, Lisa M.; Rosales, Stephanie; McKerral, Jody; Paterson, James S.; Smith, Renee J.; Jeffries, Thomas C.; Oliver, Rod L.; Mitchell, James G.

2016-01-01

Abstract Viral communities are important for ecosystem function as they are involved in critical biogeochemical cycles and controlling host abundance. This study investigates riverine viral communities around a small rural town that influences local water inputs. Myoviridae, Siphoviridae, Phycodnaviridae, Mimiviridae, Herpesviridae, and Podoviridae were the most abundant families. Viral species upstream and downstream of the town were similar, with Synechoccocus phage, salinus, Prochlorococcu...

The Multimedia Environmental Pollutant Assessment System (MEPAS)reg-sign: Riverine pathway formulations

International Nuclear Information System (INIS)

Whelan, G.; McDonald, J.P.

1996-11-01

This report describes the mathematical formulations used for contaminant fate and transport in the riverine pathway of the Multimedia Environmental Pollutant Assessment System (MEPAS). Of the many types of surface-water bodies (e.g., nontidal rivers, estuaries, lakes, open coasts, reservoirs, impoundments, etc.) in which contaminant fate and transport could be simulated, only a nontidal river model is currently incorporated into MEPAS. Nontidal rivers refer to freshwater bodies with unidirectional flow in definable channels. Because the MEPAS methodology is compositely coupled, other surface-water models can be added when deemed necessary

Future export of particulate and dissolved organic carbon from land to coastal zones of the Baltic Sea

Science.gov (United States)

Strååt, Kim Dahlgren; Mörth, Carl-Magnus; Undeman, Emma

2018-01-01

The Baltic Sea is a semi-enclosed brackish sea in Northern Europe with a drainage basin four times larger than the sea itself. Riverine organic carbon (Particulate Organic Carbon, POC and Dissolved Organic Carbon, DOC) dominates carbon input to the Baltic Sea and influences both land-to-sea transport of nutrients and contaminants, and hence the functioning of the coastal ecosystem. The potential impact of future climate change on loads of POC and DOC in the Baltic Sea drainage basin (BSDB) was assessed using a hydrological-biogeochemical model (CSIM). The changes in annual and seasonal concentrations and loads of both POC and DOC by the end of this century were predicted using three climate change scenarios and compared to the current state. In all scenarios, overall increasing DOC loads, but unchanged POC loads, were projected in the north. In the southern part of the BSDB, predicted DOC loads were not significantly changing over time, although POC loads decreased in all scenarios. The magnitude and significance of the trends varied with scenario but the sign (+ or -) of the projected trends for the entire simulation period never conflicted. Results were discussed in detail for the "middle" CO2 emission scenario (business as usual, a1b). On an annual and entire drainage basin scale, the total POC load was projected to decrease by ca 7% under this scenario, mainly due to reduced riverine primary production in the southern parts of the BSDB. The average total DOC load was not predicted to change significantly between years 2010 and 2100 due to counteracting decreasing and increasing trends of DOC loads to the six major sub-basins in the Baltic Sea. However, predicted seasonal total loads of POC and DOC increased significantly by ca 46% and 30% in winter and decreased by 8% and 21% in summer over time, respectively. For POC the change in winter loads was a consequence of increasing soil erosion and a shift in duration of snowfall and onset of the spring flood

Derivation of the physical equations solved in the inertial confinement stability code DOC. Informal report

International Nuclear Information System (INIS)

Scannapieco, A.J.; Cranfill, C.W.

1978-11-01

There now exists an inertial confinement stability code called DOC, which runs as a postprocessor. DOC (a code that has evolved from a previous code, PANSY) is a spherical harmonic linear stability code that integrates, in time, a set of Lagrangian perturbation equations. Effects due to real equations of state, asymmetric energy deposition, thermal conduction, shock propagation, and a time-dependent zeroth-order state are handled in the code. We present here a detailed derivation of the physical equations that are solved in the code

Derivation of the physical equations solved in the inertial confinement stability code DOC. Informal report

Energy Technology Data Exchange (ETDEWEB)

Scannapieco, A.J.; Cranfill, C.W.

1978-11-01

There now exists an inertial confinement stability code called DOC, which runs as a postprocessor. DOC (a code that has evolved from a previous code, PANSY) is a spherical harmonic linear stability code that integrates, in time, a set of Lagrangian perturbation equations. Effects due to real equations of state, asymmetric energy deposition, thermal conduction, shock propagation, and a time-dependent zeroth-order state are handled in the code. We present here a detailed derivation of the physical equations that are solved in the code.

Understanding the relationship between DOC and nitrate export and dominant rainfall-runoff processes through long-term high frequency measurements

Science.gov (United States)

Schwab, Michael; Klaus, Julian; Pfister, Laurent; Weiler, Markus

2016-04-01

Over the past decades, stream sampling protocols for hydro-geochemical parameters were often limited by logistical and technological constraints. While long-term monitoring protocols were typically based on weekly sampling intervals, high frequency sampling was commonly limited to a few single events. In our study, we combined high frequency and long-term measurements to understand the DOC and nitrate behaviour and dynamics for different runoff events and seasons. Our study area is the forested Weierbach catchment (0.47 km2) in Luxembourg. The fractured schist bedrock is covered by cambisol soils. The runoff response of the catchment is characterized by a double peak behaviour. A first discharge peak occurs during or right after a rainfall event (triggered by fast near surface runoff generation processes), while a second delayed peak lasts several days (generated by subsurface flow/ shallow groundwater flow). Peaks in DOC concentrations are closely linked to the first discharge peak, whereas nitrate concentrations follow the second peak. Our observations were carried out with the field deployable instrument spectro::lyser (scan Messtechnik GmbH). This instrument relies on the principles of UV-Vis spectrometry and measures DOC and nitrate concentrations. The measurements were carried out at a high frequency of 15 minutes in situ in the Weierbach creek for more than two years. In addition, a long-term validation was carried out with data obtained from the analysis of water collected with automatic samplers. The long-term, high-frequency measurements allowed us to calculate a complete and detailed balance of DOC and nitrate export over two years. Transport behaviour of the DOC and nitrate showed different dynamics between the first and second hydrograph peaks. DOC is mainly exported during first peaks, while nitrate is mostly exported during the delayed second peaks. In combination with other measurements in the catchment, the long and detailed observations have

Plant species influence on soil C after afforestation of Mediterranean degraded soils

Science.gov (United States)

Dominguez, Maria T.; García-Vargas, Carlos; Madejón, Engracia; Marañón, Teodoro

2015-04-01

Increasing C sequestration in terrestrial ecosystems is one of the main current environmental challenges to mitigate climate change. Afforestation of degraded and contaminated lands is one of the key strategies to achieve an increase in C sequestration in ecosystems. Plant species differ in their mechanisms of C-fixation, C allocation into different plant organs, and interaction with soil microorganisms, all these factors influencing the dynamics of soil C following the afforestation of degraded soils. In this work we examine the influence of different woody plant species on soil C dynamics in degraded and afforested Mediterranean soils. The soils were former agricultural lands that were polluted by a mining accident and later afforested with different native plant species. We analysed the effect of four of these species (Olea europaea var. sylvestris Brot., Populus alba L., Pistacia lentiscus L. and Retama sphaerocarpa (L.) Boiss.) on different soil C fractions, soil nutrient availability, microbial activity (soil enzyme activities) and soil CO2 fluxes 15 years after the establishment of the plantations. Results suggest that the influence of the planted trees and shrubs is still limited, being more pronounced in the more acidic and nutrient-poor soils. Litter accumulation varied among species, with the highest C accumulated in the litter under the deciduous species (Populus alba L.). No differences were observed in the amount of total soil organic C among the studied species, or in the concentrations of phenols and sugars in the dissolved organic C (DOC), which might have indicated differences in the biodegradability of the DOC. Microbial biomass and activity was highly influenced by soil pH, and plant species had a significant influence on soil pH in the more acidic site. Soil CO2 fluxes were more influenced by the plant species than total soil C content. Our results suggest that changes in total soil C stocks after the afforestation of degraded Mediterranean

Light absorption properties of colored dissolved organic matter (CDOM) in adjacent waters of the Changjiang Estuary during a flood season: implication for DOC estimation

Science.gov (United States)

Liu, Yangyang; Shen, Fang; Li, Xiuzhen

2014-11-01

Light absorption properties of colored dissolved organic matter (CDOM) in adjacent waters of the Changjiang Estuary were investigated during the summer of 2013. CDOM absorption showed a substantial portion of the total absorption and clearly dominant among most investigation stations. It generally decreased from the northwest to the southeast, which controlled by physical mixing of fresh water and seawater as was indicated by a conservative behaviour of CDOM. CDOM absorption sharply increased during phytoplankton blooms. Similarly, dissolved organic carbon (DOC) also peaked during blooms period. However, DOC exhibited a more complex behavior relative to a simple conservative mixing, possibly attributed to multiple origins of DOC. CDOM absorption and DOC co-varied to some degree, implying a potential way of DOC estimation from CDOM absorption. However, more detailed information such as CDOM and DOC composition and more validation data were required to obtain a stable CDOM - DOC pattern. Lastly, empirical algorithms with limited data were developed to retrieve CDOM absorption. Further validation of the algorithms were needed when they were to be commonly applied.

PanMetaDocs - A tool for collecting and managing the long tail of "small science data"

Science.gov (United States)

Klump, J.; Ulbricht, D.

2011-12-01

In the early days of thinking about cyberinfrastructure the focus was on "big science data". Today, the challenge is not anymore to store several terabytes of data, but to manage data objects in a way that facilitates their re-use. Key to re-use by a user as a data consumer is proper documentation of the data. Also, data consumers need discovery metadata to find the data they need and they need descriptive metadata to be able to use the data they retrieved. Thus, data documentation faces the challenge to extensively and completely describe these objects, hold the items easily accessible at a sustainable cost level. However, data curation and documentation do not rank high in the everyday work of a scientist as a data producer. Data producers are often frustrated by being asked to provide metadata on their data over and over again, information that seemed very obvious from the context of their work. A challenge to data archives is the wide variety of metadata schemata in use, which creates a number of maintenance and design challenges of its own. PanMetaDocs addresses these issues by allowing an uploaded files to be described by more than one metadata object. PanMetaDocs, which was developed from PanMetaWorks, is a PHP based web application that allow to describe data with any xml-based metadata schema. Its user interface is browser based and was developed to collect metadata and data in collaborative scientific projects situated at one or more institutions. The metadata fields can be filled with static or dynamic content to reduce the number of fields that require manual entries to a minimum and make use of contextual information in a project setting. In the development of PanMetaDocs the business logic of panMetaWorks is reused, except for the authentication and data management functions of PanMetaWorks, which are delegated to the eSciDoc framework. The eSciDoc repository framework is designed as a service oriented architecture that can be controlled through a

Satellite-Derived Distributions, Inventories and Fluxes of Dissolved and Particulate Organic Matter Along the Northeastern U.S. Continental Margin

Science.gov (United States)

Mannino, A.; Hooker, S. B.; Hyde, K.; Novak, M. G.; Pan, X.; Friedrichs, M.; Cahill, B.; Wilkin, J.

2011-01-01

Estuaries and the coastal ocean experience a high degree of variability in the composition and concentration of particulate and dissolved organic matter (DOM) as a consequence of riverine and estuarine fluxes of terrigenous DOM, sediments, detritus and nutrients into coastal waters and associated phytoplankton blooms. Our approach integrates biogeochemical measurements, optical properties and remote sensing to examine the distributions and inventories of organic carbon in the U.S. Middle Atlantic Bight and Gulf of Maine. Algorithms developed to retrieve colored DOM (CDOM), Dissolved (DOC) and Particulate Organic Carbon (POC) from NASA's MODIS-Aqua and SeaWiFS satellite sensors are applied to quantify the distributions and inventories of DOC and POC. Horizontal fluxes of DOC and POC from the continental margin to the open ocean are estimated from SeaWiFS and MODIS-Aqua distributions of DOC and POC and horizontal divergence fluxes obtained from the Northeastern North Atlantic ROMS model. SeaWiFS and MODIS imagery reveal the importance of estuarine outflow to the export of CDOM and DOC to the coastal ocean and a net community production of DOC on the shelf.

Characterising Event-Based DOM Inputs to an Urban Watershed

Science.gov (United States)

Croghan, D.; Bradley, C.; Hannah, D. M.; Van Loon, A.; Sadler, J. P.

2017-12-01

Dissolved Organic Matter (DOM) composition in urban streams is dominated by terrestrial inputs after rainfall events. Urban streams have particularly strong terrestrial-riverine connections due to direct input from terrestrial drainage systems. Event driven DOM inputs can have substantial adverse effects on water quality. Despite this, DOM from important catchment sources such as road drains and Combined Sewage Overflows (CSO's) remains poorly characterised within urban watersheds. We studied DOM sources within an urbanised, headwater watershed in Birmingham, UK. Samples from terrestrial sources (roads, roofs and a CSO), were collected manually after the onset of rainfall events of varying magnitude, and again within 24-hrs of the event ending. Terrestrial samples were analysed for fluorescence, absorbance and Dissolved Organic Carbon (DOC) concentration. Fluorescence and absorbance indices were calculated, and Parallel Factor Analysis (PARAFAC) was undertaken to aid sample characterization. Substantial differences in fluorescence, absorbance, and DOC were observed between source types. PARAFAC-derived components linked to organic pollutants were generally highest within road derived samples, whilst humic-like components tended to be highest within roof samples. Samples taken from the CSO generally contained low fluorescence, however this likely represents a dilution effect. Variation within source groups was particularly high, and local land use seemed to be the driving factor for road and roof drain DOM character and DOC quantity. Furthermore, high variation in fluorescence, absorbance and DOC was apparent between all sources depending on event type. Drier antecedent conditions in particular were linked to greater presence of terrestrially-derived components and higher DOC content. Our study indicates that high variations in DOM character occur between source types, and over small spatial scales. Road drains located on main roads appear to contain the poorest

Simulation of low temperature combustion mechanism of different combustion-supporting agents in close-coupled DOC and DPF system.

Science.gov (United States)

Jiao, Penghao; Li, Zhijun; Li, Qiang; Zhang, Wen; He, Li; Wu, Yue

2018-07-01

In the coupled Diesel Oxidation Catalyst (DOC) and Diesel Particular Filter (DPF) system, soot cannot be completely removed by only using the passive regeneration. And DPF active regeneration is necessary. The research method in this paper is to spray different kinds of combustion-supporting agents to the DOC in the front of the DPF. Therefore, the low temperature combustion mechanism of different kinds of combustion-supporting agents in DOC was studied, in order to grasp the law of combustion in DOC, and the influence of follow-up emission on DPF removal of soot. During the study, CH 4 H 2 mixture and diesel (n-heptane + toluene) were used as combustion-supporting agents respectively. The simplified mechanisms of two kinds of gas mixtures used as the combustion-supporting agents in DPF have been constructed and testified in the paper. In this paper, the combustion and emission conditions of the two combustion-supporting agents were analyzed so as to meet the practical requirements of different working conditions. Copyright © 2017 ISA. Published by Elsevier Ltd. All rights reserved.

Deposition and light absorption characteristics of precipitation dissolved organic carbon (DOC) at three remote stations in the Himalayas and Tibetan Plateau, China.

Science.gov (United States)

Li, Chaoliu; Yan, Fangping; Kang, Shichang; Chen, Pengfei; Hu, Zhaofu; Han, Xiaowen; Zhang, Guoshuai; Gao, Shaopeng; Qu, Bin; Sillanpää, Mika

2017-12-15

The concentrations, depositions and optical properties of precipitation DOC at three remote stations (Nam Co, Lulang and Everest) were investigated in the Himalayas and Tibetan Plateau (HTP). The results showed that their volume-weighted mean DOC concentrations were 1.05±1.01mgCL -1 , 0.83±0.85mgCL -1 and 0.86±0.91mgCL -1 , respectively, close to those of other remote areas in the world and lower than those of typical polluted urban cities. Combined with precipitation amounts, the DOC depositions at these three stations were calculated to be 0.34±0.32gCm -2 yr -1 , 0.84±0.86gCm -2 yr -1 and 0.16±0.17gCm -2 yr -1 , respectively. The annual DOC deposition in the HTP was approximately 0.94±0.87TgC, the highest and lowest values appeared in the southeastern and northwestern plateau, respectively. The sources of DOC in the precipitation at these three stations were remarkably different, indicating large spatial heterogeneity in the sources of precipitation DOC over the HTP. Nam Co presented combustion sources from South Asia and local residents, Lulang showed biomass combustion source from South Asia, and Everest was mainly influenced by local mineral dust. The values of the MAC DOC at 365nm were 0.48±0.47m 2 g -1 , 0.25±0.15m 2 g -1 , and 0.64±0.49m 2 g -1 , respectively, for the precipitation at the three stations. All of these values were significantly lower than those of corresponding near-surface aerosol samples because precipitation DOC contains more secondary organic aerosol with low light absorption abilities. Additionally, this phenomenon was also observed in seriously polluted urban areas, implying it is universal in the atmosphere. Because precipitation DOC contains information for both particle-bound and gaseous components from the near surface up to the altitude of clouds where precipitation occurs, the MAC DOC of precipitation is more representative than that of near-surface aerosols for a given region. Copyright © 2017 Elsevier B.V. All rights

Plasma 11-deoxycorticosterone (DOC) and mineralocorticoid receptor testicular expression during rainbow trout Oncorhynchus mykiss spermiation: implication with 17alpha, 20beta-dihydroxyprogesterone on the milt fluidity?

Science.gov (United States)

Milla, Sylvain; Terrien, Xavier; Sturm, Armin; Ibrahim, Fidaa; Giton, Franck; Fiet, Jean; Prunet, Patrick; Le Gac, Florence

2008-05-19

In rainbow trout (Oncorhynchus mykiss), the endocrine control of spermiation is not fully understood. Besides 11ketotestosterone (11KT) and 17alpha, 20beta-dihydroxyprogesterone (MIS), the potential physiological ligand of the mineralocorticoid receptor (MR) 11-deoxycorticosterone (DOC), is a credible candidate in O. mykiss spermiation regulation as spermiation is accompanied with changes in aqueous and ionic flows. In this study, we investigated potential roles of DOC during spermiation 1) by describing changes in blood plasma DOC level, MR mRNA abundance during the reproductive cycle and MR localization in the reproductive tract 2) by investigating and comparing the effects of DOC (10 mg/kg) and MIS (5 mg/kg) supplementations on sperm parameters 3) by measuring the in vitro effect of DOC on testis MIS production. The plasma concentration of DOC increased rapidly at the end of the reproductive cycle to reach levels that were 10-50 fold higher in mature males than in immature fish. MR mRNA relative abundance was lower in maturing testes when compared to immature testes, but increased rapidly during the spermiation period, immediately after the plasma rise in DOC. At this stage, immunohistochemistry localized MR protein to cells situated at the periphery of the seminiferous tubules and in the efferent ducts. Neither DOC nor MIS had significant effects on the mean sperm volume, although MIS treatment significantly increased the percentage of males producing milt. However, a significant reduction in the spermatocrit was observed when DOC and MIS were administrated together. Finally, we detected an inhibitory effect of DOC on testis MIS production in vitro. These results are in agreement with potential roles of DOC and MR during spermiation and support the hypothesis that DOC and MIS mechanisms of action are linked during this reproductive stage, maybe controlling milt fluidity. They also confirm that in O. mykiss MIS is involved in spermiation induction.

Land management as a factor controlling dissolved organic carbon release from upland peat soils 1: spatial variation in DOC productivity.

Science.gov (United States)

Yallop, A R; Clutterbuck, B

2009-06-01

The importance of soil storage in global carbon cycling is well recognised and factors leading to increased losses from this pool may act as a positive feedback mechanism in global warming. Upland peat soils are usually assumed to serve as carbon sinks, there is however increasing evidence of carbon loss from upland peat soils, and DOC concentrations in UK rivers have increased markedly over the past three decades. A number of drivers for increasing DOC release from peat soils have been proposed although many of these would not explain fine-scale variations in DOC release observed in many catchments. We examined the effect of land use and management on DOC production in upland peat catchments at two spatial scales within the UK. DOC concentration was measured in streams draining 50 small-scale catchments (b3 km2) in three discrete regions of the south Pennines and one area in the North Yorkshire Moors. Annual mean DOC concentration was also derived from water colour data recorded at water treatment works for seven larger scale catchments (1.5-20 km2) in the south Pennines. Soil type and land use/management in all catchments were characterised from NSRI digital soil data and ortho-corrected colour aerial imagery. Of the factors assessed, representing all combinations of soil type and land use together with catchment slope and area, the proportion of exposed peat surface resulting from new heather burning was consistently identified as the most significant predictor of variation in DOC concentration. This relationship held across all blanket peat catchments and scales. We propose that management activities are driving changes in edaphic conditions in upland peat to those more favourable for aerobic microbial activity and thus enhance peat decomposition leading to increased losses of carbon from these environments.

Four-year-BS-position-paper.pdf | misc docs | academy | Indian ...

Indian Academy of Sciences (India)

Home; academy; misc docs; Four-year-BS-position-paper.pdf. 404! error. The page your are looking for can not be found! Please check the link or use the navigation bar at the top. YouTube; Twitter; Facebook; Blog. Academy News. IAS Logo. 29th Mid-year meeting. Posted on 19 January 2018. The 29th Mid-year meeting of ...

Sources and fate of organic (DOC, POC, CDOM) and inorganic (DIC) carbon in a mangrove dominated estuary (French Guiana)

Science.gov (United States)

Ray, R.; Michaud, E.; Vantrepotte, V.; Aller, R. C.; Morvan, S.; Thouzeau, G.

2016-12-01

We studied the mangrove dominated Sinnamary estuarine system in French Guiana during the dry and wet seasons in 2015 to examine the sources, transport and fate of surface water DOC, POC and DIC along the salinity gradient and the effect of tidal fluctuations on carbon dynamics. Elemental ratios, stable isotopes and optical properties (absorption) were applied as proxies to delineate the sources and molecular structure of the organic carbon. Results showed that during the wet season there were significant net inputs of POC and DOC along the salinity gradient from mangroves and enhanced surface runoff. Time series performed during the dry season at a station in channel water adjacent to mangroves revealed mangrove-derived export and exchanges of DOC and POC during the ebb and marine algae import during the flood. DOC was the dominant form of carbon in both seasons with DOC:POC ratios typically between 13 and 40. Both δ13DOC and CDOM descriptors (e.g., S275-295 and a*412) confirmed mangrove litter leaching to be the primary contributor of high molecular weight dissolved organic matter in the wet season which was replaced by marine phytoplanktonic OC during transport offshore in the dry season. CDOM aromaticity is lower in the dry season as mangrove inputs decrease. POC showed similar trends as DOC, with maximum contributions of terrestrial litter in the river and mixing zone, and in situ production dominant in the marine zone. The entire estuary is heterotrophic, exhibiting high pCO2 (837-5575µatm) and oxygen undersaturation (59-86%) in both seasons, and substantial CO2 emission fluxes (278-3671mmol m-2 d-1). Intense local remineralization and laterally transported CO2 originating from mangrove benthic respiration could account for the water column pCO2 enrichment during low tide and night time. Keywords: Organic carbon, stable isotopes, CDOM, pCO2, mangrove, French Guiana

15 CFR 20.1 - The purpose of DOC's age discrimination regulations.

Science.gov (United States)

2010-01-01

... NONDISCRIMINATION ON THE BASIS OF AGE IN PROGRAMS OR ACTIVITIES RECEIVING FEDERAL FINANCIAL ASSISTANCE General § 20... basis of age in programs or activities receiving Federal financial assistance. The Act and the general... 15 Commerce and Foreign Trade 1 2010-01-01 2010-01-01 false The purpose of DOC's age...

Integrated bicarbonate-form ion exchange treatment and regeneration for DOC removal: Model development and pilot plant study.

Science.gov (United States)

Hu, Yue; Boyer, Treavor H

2017-05-15

The application of bicarbonate-form anion exchange resin and sodium bicarbonate salt for resin regeneration was investigated in this research is to reduce chloride ion release during treatment and the disposal burden of sodium chloride regeneration solution when using traditional chloride-form ion exchange (IX). The target contaminant in this research was dissolved organic carbon (DOC). The performance evaluation was conducted in a completely mixed flow reactor (CMFR) IX configuration. A process model that integrated treatment and regeneration was investigated based on the characteristics of configuration. The kinetic and equilibrium experiments were performed to obtain required parameters for the process model. The pilot plant tests were conducted to validate the model as well as provide practical understanding on operation. The DOC concentration predicted by the process model responded to the change of salt concentration in the solution, and showed a good agreement with pilot plant data with less than 10% difference in terms of percentage removal. Both model predictions and pilot plant tests showed over 60% DOC removal by bicarbonate-form resin for treatment and sodium bicarbonate for regeneration, which was comparable to chloride-form resin for treatment and sodium chloride for regeneration. Lastly, the DOC removal was improved by using higher salt concentration for regeneration. Copyright © 2017 Elsevier Ltd. All rights reserved.

Salicylic acid determination in estuarine and riverine waters using hollow fiber liquid-phase microextraction and capillary zone electrophoresis.

Science.gov (United States)

da Silva, Gilmar Silvério; Lima, Diana L D; Esteves, Valdemar Inocêncio

2017-06-01

A low-cost methodology using hollow fiber liquid-phase microextraction (HF-LPME) and capillary zone electrophoresis (CZE) with UV-Vis detector was developed to analyze the salicylic acid (SA) in estuarine and riverine waters. The technique is easy-to-use and rapid, and demands little volume of organic solvent. The extraction was carried out using a polypropylene membrane supporting into octan-1-ol. HF-LPME under optimized conditions (donor solution sample pH 2, acceptor solution pH 14, sample volume 25 mL, fiber length 10 cm, acceptor volume 25 μL, extraction time 3 h and stirring speed 350 rpm) presented high enrichment factor (407 times) and good recovery in real water samples (from 88 to 110%). A limit of detection of 2.6 μg L -1 was achieved using CZE with UV-Vis detector as quantification method. The method was applied to direct quantification of SA in environmental complex estuarine and riverine water matrices.

Spatial distribution and implications to sources of halogenated flame retardants in riverine sediments of Taizhou, an intense e-waste recycling area in eastern China.

Science.gov (United States)

Zhou, Shanshan; Fu, Jie; He, Huan; Fu, Jianjie; Tang, Qiaozhi; Dong, Minfeng; Pan, Yongqiang; Li, An; Liu, Weiping; Zhang, Limin

2017-10-01

Concentrations and spatial distribution pattern of organohalogen flame retardants were investigated in the riverine surface sediments from Taizhou, an intensive e-waste recycling region in China. The analytes were syn- and anti- Dechlorane Plus (DP), Dechloranes 602, 603, and 604, a DP monoadduct, two dechlorinated DPs and 8 congeners of polybrominated diphenyl ethers (PBDEs). The concentrations of Σ 8 PBDEs, ΣDP, ΣDec600s, and ΣDP-degradates ranged from recycling facilities. Such patterns were largely shared by Dec602 and dechlorinated DP, although their concentration levels were much lower. These major flame retardants significantly correlate with each other, and cluster together in the loading plot of principle component analysis. In contrast, most non-deca PBDE congeners do not correlate with DPs. Dec604 stood out having distinctly different spatial distribution pattern, which could be linked to historical use of mirex. Organic matter content of the sediment was not the dominant factor in determining the spatial pattern of pollution by halogenated flame retardants in the rivers of this study. Copyright © 2017 Elsevier Ltd. All rights reserved.

TogoDoc server/client system: smart recommendation and efficient management of life science literature.

Directory of Open Access Journals (Sweden)

Wataru Iwasaki

Full Text Available In this paper, we describe a server/client literature management system specialized for the life science domain, the TogoDoc system (Togo, pronounced Toe-Go, is a romanization of a Japanese word for integration. The server and the client program cooperate closely over the Internet to provide life scientists with an effective literature recommendation service and efficient literature management. The content-based and personalized literature recommendation helps researchers to isolate interesting papers from the "tsunami" of literature, in which, on average, more than one biomedical paper is added to MEDLINE every minute. Because researchers these days need to cover updates of much wider topics to generate hypotheses using massive datasets obtained from public databases or omics experiments, the importance of having an effective literature recommendation service is rising. The automatic recommendation is based on the content of personal literature libraries of electronic PDF papers. The client program automatically analyzes these files, which are sometimes deeply buried in storage disks of researchers' personal computers. Just saving PDF papers to the designated folders makes the client program automatically analyze and retrieve metadata, rename file names, synchronize the data to the server, and receive the recommendation lists of newly published papers, thus accomplishing effortless literature management. In addition, the tag suggestion and associative search functions are provided for easy classification of and access to past papers (researchers who read many papers sometimes only vaguely remember or completely forget what they read in the past. The TogoDoc system is available for both Windows and Mac OS X and is free. The TogoDoc Client software is available at http://tdc.cb.k.u-tokyo.ac.jp/, and the TogoDoc server is available at https://docman.dbcls.jp/pubmed_recom.

TogoDoc server/client system: smart recommendation and efficient management of life science literature.

Science.gov (United States)

Iwasaki, Wataru; Yamamoto, Yasunori; Takagi, Toshihisa

2010-12-13

In this paper, we describe a server/client literature management system specialized for the life science domain, the TogoDoc system (Togo, pronounced Toe-Go, is a romanization of a Japanese word for integration). The server and the client program cooperate closely over the Internet to provide life scientists with an effective literature recommendation service and efficient literature management. The content-based and personalized literature recommendation helps researchers to isolate interesting papers from the "tsunami" of literature, in which, on average, more than one biomedical paper is added to MEDLINE every minute. Because researchers these days need to cover updates of much wider topics to generate hypotheses using massive datasets obtained from public databases or omics experiments, the importance of having an effective literature recommendation service is rising. The automatic recommendation is based on the content of personal literature libraries of electronic PDF papers. The client program automatically analyzes these files, which are sometimes deeply buried in storage disks of researchers' personal computers. Just saving PDF papers to the designated folders makes the client program automatically analyze and retrieve metadata, rename file names, synchronize the data to the server, and receive the recommendation lists of newly published papers, thus accomplishing effortless literature management. In addition, the tag suggestion and associative search functions are provided for easy classification of and access to past papers (researchers who read many papers sometimes only vaguely remember or completely forget what they read in the past). The TogoDoc system is available for both Windows and Mac OS X and is free. The TogoDoc Client software is available at http://tdc.cb.k.u-tokyo.ac.jp/, and the TogoDoc server is available at https://docman.dbcls.jp/pubmed_recom.

'Ike Wai Professional Development Model for Students and Post-docs

Science.gov (United States)

Bruno, B. C.

2016-12-01

'Ike Wai: Securing Hawaii's Water Future, funded by NSF EPSCoR, is an interdisciplinary research collaboration among geophysicists, geochemists, engineers, microbiologists, computational modelers, data scientists and social scientists. Key questions include: How much water is there? How does it flow? How long will it last? Undergraduate students, graduate students and post-docs are actively involved in the research, and their professional development is a key part of the project. An underlying principle is that students assume responsibility for their own learning and professional development. Based on the model created by the NSF Center for Microbial Oceanography: Research and Education (C-MORE) (Bruno et al, 2008; Guannel et al 2014, Bottjer et al 2014), the 'Ike Wai professional development program includes (1) Leadership. Each student and post-doc creates an Individualized Professional Development plan, which includes leadership training (provided by external facilitators) and assuming leadership roles (such as developing and implementing trainings for their peers). (2) EDventures. Based on the C-MORE model, EDventures combines proposal-writing training with the incentive of seed money. Rather than providing training a priori, the EDventures model encourages students and post-docs to write a proposal based on guidelines provided. Training occurs during a two-stage review stage: proposers respond to panel reviews and resubmit their proposal within a single review cycle. C-MORE EDventures alumni self-report statistically significant confidence gains on all questions posed. Their subsequent proposal success is envious: of the 12 proposals submitted by to NSF, 50% were funded. (Wood Charlson & Bruno, 2015) (3) Layered Mentoring Network. All ´Ike Wai participants serve as both mentor and mentee. Students are matched with a non-research mentor in addition to their advisor to promote a holistic approach to career development. They will also serve as mentors to more

Decreasing DOC trends in soil solution along the hillslopes at two IM sites in southern Sweden--geochemical modeling of organic matter solubility during acidification recovery.

Science.gov (United States)

Löfgren, Stefan; Gustafsson, Jon Petter; Bringmark, Lage

2010-12-01

Numerous studies report increased concentrations of dissolved organic carbon (DOC) during the last two decades in boreal lakes and streams in Europe and North America. Recently, a hypothesis was presented on how various spatial and temporal factors affect the DOC dynamics. It was concluded that declining sulphur deposition and thereby increased DOC solubility, is the most important driver for the long-term DOC concentration trends in surface waters. If this recovery hypothesis is correct, the DOC levels should increase both in the soil solution as well as in the surrounding surface waters as soil pH rises and the ionic strength declines due to the reduced input of SO(4)(2-) ions. In this project a geochemical model was set up to calculate the net humic charge and DOC solubility trends in soils during the period 1996-2007 at two integrated monitoring sites in southern Sweden, showing clear signs of acidification recovery. The Stockholm Humic Model was used to investigate whether the observed DOC solubility is related to the humic charge and to examine how pH and ionic strength influence it. Soil water data from recharge and discharge areas, covering both podzols and riparian soils, were used. The model exercise showed that the increased net charge following the pH increase was in many cases counteracted by a decreased ionic strength, which acted to decrease the net charge and hence the DOC solubility. Thus, the recovery from acidification does not necessarily have to generate increasing DOC trends in soil solution. Depending on changes in pH, ionic strength and soil Al pools, the trends might be positive, negative or indifferent. Due to the high hydraulic connectivity with the streams, the explanations to the DOC trends in surface waters should be searched for in discharge areas and peat lands. Copyright © 2010 Elsevier B.V. All rights reserved.

The influence of changes in lifestyle and mercury exposure in riverine populations of the Madeira River (Amazon Basin) near a hydroelectric project.

Science.gov (United States)

Hacon, Sandra S; Dórea, José G; Fonseca, Márlon de F; Oliveira, Beatriz A; Mourão, Dennys S; Ruiz, Claudia M V; Gonçalves, Rodrigo A; Mariani, Carolina F; Bastos, Wanderley R

2014-02-26

In the Amazon Basin, naturally occurring methylmercury bioaccumulates in fish, which is a key source of protein consumed by riverine populations. The hydroelectric power-plant project at Santo Antônio Falls allows us to compare the Hg exposure of riverine populations sparsely distributed on both sides of the Madeira river before the area is to be flooded. From 2009 to 2011, we concluded a population survey of the area (N = 2,008; representing circa 80% of community residents) that estimated fish consumption and mercury exposure of riverine populations with different degrees of lifestyle related to fish consumption. Fish samples from the Madeira river (N = 1,615) and 110 species were analyzed for Hg. Hair-Hg was significantly lower (p < 0.001) in less isolated communities near to the capital of Porto Velho (median 2.32 ppm) than in subsistence communities in the Cuniã Lake, 180 km from Porto Velho city (median 6.3 ppm). Fish Hg concentrations ranged from 0.01 to 6.06 µg/g, depending on fish size and feeding behavior. Currently available fish in the Madeira river show a wide variability in Hg concentrations. Despite cultural similarities, riparians showed hair-Hg distribution patterns that reflect changes in fish-eating habits driven by subsistence characteristics.

The Global Network of Isotopes in Rivers (GNIR): Integration of Stable Water Isotopes in Riverine Research and Management

International Nuclear Information System (INIS)

Halder, J.; Terzer, S.; Wassenaar, L.; Araguas, L.; Aggarwal, P.

2015-01-01

Rivers play a crucial role in the global water cycle as watershed-integrating hydrological conduits for returning terrestrial precipitation, runoff, surface and groundwater, as well as melting snow and ice back to the world’s oceans. The IAEA Global Network of Isotopes in Rivers (GNIR) is the coherent extension of the IAEA Global Network for Isotopes in Precipitation (GNIP) and aims to fill the informational data gaps between rainfall and river discharge. Whereas the GNIP has been surveying the stable hydrogen and oxygen isotopes, and tritium composition in precipitation, the objective of GNIR is to accumulate and disseminate riverine isotope data. We introduce the new global database of riverine water isotopes and evaluate its current long-term data holdings with the objective to improve the application of water isotopes and to inform water managers and researchers. An evaluation of current GNIR database holdings confirmed that seasonal variations of the stable water isotope composition in rivers are closely coupled to precipitation and snow-melt water run-off on a global scale. Rivers could be clustered on the basis of seasonal variations in their isotope composition and latitude. Results showed furthermore, that there were periodic phases within each of these groupings and additional modelling exercises allowed a priori prediction of the seasonal variability as well as the isotopic composition of stable water isotopes in rivers. This predictive capacity will help to improve existing and new sampling strategies, help to validate and interpret riverine isotope data, and identify important catchment processes. Hence, the IAEA promulgates and supports longterm hydrological isotope observation networks and the application of isotope studies complementary with conventional hydrological, water quality, and ecological studies. (author)

DOC1-Dependent Recruitment of NURD Reveals Antagonism with SWI/SNF during Epithelial-Mesenchymal Transition in Oral Cancer Cells

Directory of Open Access Journals (Sweden)

Adone Mohd-Sarip

2017-07-01

Full Text Available The Nucleosome Remodeling and Deacetylase (NURD complex is a key regulator of cell differentiation that has also been implicated in tumorigenesis. Loss of the NURD subunit Deleted in Oral Cancer 1 (DOC1 is associated with human oral squamous cell carcinomas (OSCCs. Here, we show that restoration of DOC1 expression in OSCC cells leads to a reversal of epithelial-mesenchymal transition (EMT. This is caused by the DOC1-dependent targeting of NURD to repress key transcriptional regulators of EMT. NURD recruitment drives extensive epigenetic reprogramming, including eviction of the SWI/SNF remodeler, formation of inaccessible chromatin, H3K27 deacetylation, and binding of PRC2 and KDM1A, followed by H3K27 methylation and H3K4 demethylation. Strikingly, depletion of SWI/SNF mimics the effects of DOC1 re-expression. Our results suggest that SWI/SNF and NURD function antagonistically to control chromatin state and transcription. We propose that disturbance of this dynamic equilibrium may lead to defects in gene expression that promote oncogenesis.

panMetaDocs, eSciDoc, and DOIDB—An Infrastructure for the Curation and Publication of File-Based Datasets for GFZ Data Services

Directory of Open Access Journals (Sweden)

Damian Ulbricht

2016-03-01

Full Text Available The GFZ German Research Centre for Geosciences is the national laboratory for Geosciences in Germany. As part of the Helmholtz Association, providing and maintaining large-scale scientific infrastructures are an essential part of GFZ activities. This includes the generation of significant volumes and numbers of research data, which subsequently become source materials for data publications. The development and maintenance of data systems is a key component of GFZ Data Services to support state-of-the-art research. A challenge lies not only in the diversity of scientific subjects and communities, but also in different types and manifestations of how data are managed by research groups and individual scientists. The data repository of GFZ Data Services provides a flexible IT infrastructure for data storage and publication, including minting of digital object identifiers (DOI. It was built as a modular system of several independent software components linked together through Application Programming Interfaces (APIs provided by the eSciDoc framework. Principal application software are panMetaDocs for data management and DOIDB for logging and moderating data publications activities. Wherever possible, existing software solutions were integrated or adapted. A summary of our experiences made in operating this service is given. Data are described through comprehensive landing pages and supplementary documents, like journal articles or data reports, thus augmenting the scientific usability of the service.

Seasonal estimates of DOC standing stocks in Apalachicola Bay estuary: Towards a better understanding using field, ocean color and model data

Science.gov (United States)

D'Sa, E. J.; Joshi, I.; Osburn, C. L.; Bianchi, T. S.; Ko, D. S.; Oviedo-Vargas, D.; Arellano, A.; Ward, N.

2016-12-01

Apalachicola Bay, a semi-enclosed estuary located in Florida's panhandle, is well known for its water quality and oyster yields. We present the use of combined field and ocean color satellite observations and the outputs of a high-resolution hydrodynamic model to study the influence of physical processes on the distribution and the transport of terrestrially derived CDOM and DOC to shelf waters during the spring and fall of 2015. Determination of DOC stocks were based on the development of a CDOM algorithm (R2 = 0.87, N = 9) for the VIIRS ocean color sensor, and the assessment of CDOM - DOC relationships (R2 = 0.88, N = 13 in March; R2 = 0.83, N = 24 in November) for the Apalachicola Bay. Satellite-derived CDOM and DOC maps together with model-based salinity distributions revealed their spatial extent, sources and transport to the shelf water. Furthermore, strong seasonal influence on DOM distribution in the bay was associated with inputs from Apalachicola and Carrabelle Rivers and the surrounding marshes. Estimates of DOC standing stocks in the bay obtained using ocean color data and high-resolution bathymetry showed relatively higher stocks in November ( 3.71 × 106 kg C, 560 km2) than in March ( 4.07 × 106 kg C, 560 km2) despite lower river discharge in dry season. Results of DOC flux estimates from the bay to coastal waters will also be presented.

High-frequency DOC and nitrate measurements provide new insights into their export and their relationships to rainfall-runoff processes

Science.gov (United States)

Schwab, Michael; Klaus, Julian; Pfister, Laurent; Weiler, Markus

2015-04-01

Over the past decades, stream sampling protocols for environmental tracers were often limited by logistical and technological constraints. Long-term sampling programs would typically rely on weekly sampling campaigns, while high-frequency sampling would remain restricted to a few days or hours at best. We stipulate that the currently predominant sampling protocols are too coarse to capture and understand the full amplitude of rainfall-runoff processes and its relation to water quality fluctuations. Weekly sampling protocols are not suited to get insights into the hydrological system during high flow conditions. Likewise, high frequency measurements of a few isolated events do not allow grasping inter-event variability in contributions and processes. Our working hypothesis is based on the potential of a new generation of field-deployable instruments for measuring environmental tracers at high temporal frequencies over an extended period. With this new generation of instruments we expect to gain new insights into rainfall-runoff dynamics, both at intra- and inter-event scales. Here, we present the results of one year of DOC and nitrate measurements with the field deployable UV-Vis spectrometer spectro::lyser (scan Messtechnik GmbH). The instrument measures the absorption spectrum from 220 to 720 nm in situ and at high frequencies and derives DOC and nitrate concentrations. The measurements were carried out at 15 minutes intervals in the Weierbach catchment (0.47 km2) in Luxemburg. This fully forested catchment is characterized by cambisol soils and fractured schist as underlying bedrock. The time series of DOC and nitrate give insights into the high frequency dynamics of stream water. Peaks in DOC concentrations are closely linked to discharge peaks that occur during or right after a rainfall event. Those first discharge peaks can be linked to fast near surface runoff processes and are responsible for a remarkable amount of DOC export. A special characterisation of

Carbon monoxide apparent quantum yields and photoproduction in the Tyne estuary

Directory of Open Access Journals (Sweden)

A. Stubbins

2011-03-01

Full Text Available Carbon monoxide (CO apparent quantum yields (AQYs are reported for a suite of riverine, estuarine and sea water samples, spanning a range of coloured dissolved organic matter (CDOM sources, diagenetic histories, and concentrations (absorption coefficients. CO AQYs were highest for high CDOM riverine samples and almost an order of magnitude lower for low CDOM coastal seawater samples. CO AQYs were between 47 and 80% lower at the mouth of the estuary than at its head. Whereas, a conservative mixing model predicted only 8 to 14% decreases in CO AQYs between the head and mouth of the estuary, indicating that a highly photoreactive pool of terrestrial CDOM is lost during estuarine transit. The CDOM absorption coefficient (a at 412 nm was identified as a good proxy for CO AQYs (linear regression r² > 0.8; n = 12 at all CO AQY wavelengths studied (285, 295, 305, 325, 345, 365, and 423 nm and across environments (high CDOM river, low CDOM river, estuary and coastal sea. These regressions are presented as empirical proxies suitable for the remote sensing of CO AQYs in natural waters, including open ocean water, and were used to estimate CO AQY spectra and CO photoproduction in the Tyne estuary based upon annually averaged estuarine CDOM absorption data. A minimum estimate of annual CO production was determined assuming that only light absorbed by CDOM leads to the formation of CO and a maximum limit was estimated assuming that all light entering the water column is absorbed by CO producing photoreactants (i.e. that particles are also photoreactive. In this way, annual CO photoproduction in the Tyne was estimated to be between 0.99 and 3.57 metric tons of carbon per year, or 0.004 to 0.014% of riverine dissolved organic carbon (DOC inputs to the estuary. Extrapolation of CO photoproduction rates to estimate total DOC photomineralisation indicate that less than 1% of DOC inputs are removed via photochemical processes during

Lipid catabolism of invertebrate predator indicates widespread wetland ecosystem degradation

Science.gov (United States)

Anteau, Michael J.; Afton, Alan D.

2011-01-01

Animals frequently undergo periods when they accumulate lipid reserves for subsequent energetically expensive activities, such as migration or breeding. During such periods, daily lipid-reserve dynamics (DLD) of sentinel species can quantify how landscape modifications affect function, health, and resilience of ecosystems. Aythya affinis (Eyton 1838; lesser scaup; diving duck) are macroinvertebrate predators; they migrate through an agriculturally dominated landscape in spring where they select wetlands with the greatest food density to refuel and accumulate lipid reserves for subsequent reproduction. We index DLD by measuring plasma-lipid metabolites of female scaup (n = 459) that were refueling at 75 spring migration stopover areas distributed across the upper Midwest, USA. We also indexed DLD for females (n = 44) refueling on a riverine site (Pool 19) south of our upper Midwest study area. We found that mean DLD estimates were significantly (P<0.05) less than zero in all ecophysiographic regions of the upper Midwest, and the greatest negative value was in the Iowa Prairie Pothole region (-31.6). Mean DLD was 16.8 at Pool 19 and was markedly greater than in any region of the upper Midwest. Our results indicate that females catabolized rather than stored lipid reserves throughout the upper Midwest. Moreover, levels of lipid catabolism are alarming, because scaup use the best quality wetlands available within a given stopover area. Accordingly, these results provide evidence of wetland ecosystem degradation across this large agricultural landscape and document affects that are carried-up through several trophic levels. Interestingly, storing of lipids by scaup at Pool 19 likely reflects similar ecosystem perturbations as observed in the upper Midwest because wetland drainage and agricultural runoff nutrifies the riverine habitat that scaup use at Pool 19. Finally, our results underscore how using this novel technique to monitor DLD, of a carefully selected sentinel

Lipid catabolism of invertebrate predator indicates widespread wetland ecosystem degradation.

Directory of Open Access Journals (Sweden)

Michael J Anteau

Full Text Available Animals frequently undergo periods when they accumulate lipid reserves for subsequent energetically expensive activities, such as migration or breeding. During such periods, daily lipid-reserve dynamics (DLD of sentinel species can quantify how landscape modifications affect function, health, and resilience of ecosystems. Aythya affinis (Eyton 1838; lesser scaup; diving duck are macroinvertebrate predators; they migrate through an agriculturally dominated landscape in spring where they select wetlands with the greatest food density to refuel and accumulate lipid reserves for subsequent reproduction. We index DLD by measuring plasma-lipid metabolites of female scaup (n = 459 that were refueling at 75 spring migration stopover areas distributed across the upper Midwest, USA. We also indexed DLD for females (n = 44 refueling on a riverine site (Pool 19 south of our upper Midwest study area. We found that mean DLD estimates were significantly (P<0.05 less than zero in all ecophysiographic regions of the upper Midwest, and the greatest negative value was in the Iowa Prairie Pothole region (-31.6. Mean DLD was 16.8 at Pool 19 and was markedly greater than in any region of the upper Midwest. Our results indicate that females catabolized rather than stored lipid reserves throughout the upper Midwest. Moreover, levels of lipid catabolism are alarming, because scaup use the best quality wetlands available within a given stopover area. Accordingly, these results provide evidence of wetland ecosystem degradation across this large agricultural landscape and document affects that are carried-up through several trophic levels. Interestingly, storing of lipids by scaup at Pool 19 likely reflects similar ecosystem perturbations as observed in the upper Midwest because wetland drainage and agricultural runoff nutrifies the riverine habitat that scaup use at Pool 19. Finally, our results underscore how using this novel technique to monitor DLD, of a carefully

STS-82 Pilot Scott J. 'Doc' Horowitz Suit Up

Science.gov (United States)

1997-01-01

STS-82 Pilot Scott J. 'Doc' Horowitz puts on a glove of his launch and entry suit with assistance from a suit technician in the Operations and Checkout Building. This is Horowitz''';s second space flight. He and the six other crew members will depart shortly for Launch Pad 39A, where the Space Shuttle Discovery awaits liftoff on a 10-day mission to service the orbiting Hubble Space Telescope (HST). This will be the second HST servicing mission. Four back-to-back spacewalks are planned.

Fluorescence measured in situ as a proxy of CDOM absorption and DOC concentration in the Baltic Sea

OpenAIRE

Piotr Kowalczuk; Monika Zabłocka; Sławomir Sagan; Karol Kuliński

2010-01-01

This study presents results from field surveys performed in 2008 and 2009 in the southern Baltic in different seasons. The main goal of these measurements was to identify the empirical relationships between DOM optical properties and DOC. CDOM absorption and fluorescence and DOC concentrations were measured during thirteen research cruises. The values of the CDOM absorption coefficient at 370 nm aCDOM(370) ranged from 0.70 m-1 to 7.94 m-1, and CDOM fluorescence intensities (ex./em. 370/460) I...

Speleothem records of acid sulphate deposition and organic carbon mobilisation

Science.gov (United States)

Wynn, Peter; Fairchild, Ian; Bourdin, Clement; Baldini, James; Muller, Wolfgang; Hartland, Adam; Bartlett, Rebecca

2017-04-01

Dramatic increases in measured surface water DOC in recent decades have been variously attributed to either temperature rise, or destabilisation of long-term soil carbon pools following sulphur peak emissions status. However, whilst both drivers of DOC dynamics are plausible, they remain difficult to test due to the restricted nature of the available records of riverine DOC flux (1978 to present), and the limited availability of SO2 emissions inventory data at the regional scale. Speleothems offer long term records of both sulphur and carbon. New techniques to extract sulphur concentrations and isotopes from speleothem calcite have enabled archives of pollution history and environmental acidification to be reconstructed. Due to the large dynamic range in sulphur isotopic values from end member sources (marine aerosol +21 ‰ to continental biogenic emissions -30 ‰) and limited environmental fractionation under oxidising conditions, sulphur isotopes form an ideal tracer of industrial pollution and environmental acidification in the palaeo-record. We couple this acidification history to the carbon record, using organic matter fluorescence and trace metals. Trace metal ratios and abundance can be used to infer the type and size of organic ligand and are therefore sensitive to changes in temperature as a driver of organic carbon processing and biodegradation. This allows fluorescent properties and ratios of trace metals in speleothem carbonate to be used to represent both the flux of organic carbon into the cave as well as the degradation pathway. Here we present some of the first results of this work, exploring sulphur acidification as a mechanistic control on carbon solubility and export throughout the twentieth century.

Transport and degradation of dissolved organic matter and associated freshwater pathways in the Laptev Sea (Siberian Arctic)

Science.gov (United States)

Hoelemann, Jens; Janout, Markus; Koch, Boris; Bauch, Dorothea; Hellmann, Sebastian; Eulenburg, Antje; Heim, Birgit; Kassens, Heidemarie; Timokhov, leonid

2016-04-01

The Siberian shelves are seasonally ice-covered and characterized by large freshwater runoff rates from some of the largest rivers on earth. These rivers also provide a considerable amount of dissolved organic carbon (DOC) to the Arctic Ocean. With an annual load of about 6 Tg DOC a-1 the Lena River contributes nearly 20 percent of the annual DOC discharge to the Arctic Ocean. We present a comprehensive dataset collected during multiple Laptev Sea expeditions carried out in spring, summer and fall (2010-15) in order to explore the processes controlling the dispersal and degradation of DOM during the river water's passage across the shelf. Our investigations are focused on CDOM (Colored Dissolved Organic Matter), which resembles the DOC concentration, interacts with solar radiation and forms a major fraction of the organic matter pool. Our results show an inverse correlation between salinity and CDOM, which emphasizes its terrigenous source. Further, the spectral slope of CDOM absorption indicates that photochemical bleaching is the main process that reduces the CDOM absorption (~ 20%) in freshwater along its transport across the shelf. The distribution of the Lena river water is primarily controlled by winds in summer. During summers with easterly or southerly winds, the plume remains on the central and northern Laptev shelf, and is available for export into the Arctic Basin. The CDOM-rich river water increases the absorption of solar radiation and enhances warming of a shallow surface layer. This emphasizes the importance of CDOM for sea surface temperatures and lateral ice melt on the shelf and adjacent basin. DOC concentrations in freshwater vary seasonally and become larger with increasing discharge. Our data indicate that the CDOM concentrations are highest during the freshet when landfast ice is still present. Subsequent mixing with local sea ice meltwater lowers CDOM to values that are characteristic for the Lena freshwater during the rest of the year.

Using Eco-hydrologic modeling in the Penobscot River Watershed to explore the role of climate and land use change on DOC concentration and flux

Science.gov (United States)

Rouhani, S. F. B. B.; Schaaf, C.; Douglas, E. M.; Huntington, T. G.; Kim, J.

2017-12-01

Dissolved Organic Carbon leaches from the terrestrial watersheds to serve as one of the largest sources of marine DOC. Runoff, slope, soil organic matter and land cover characteristics are the primary spatial factors controlling the variability of fluvial Dissolved Organic Carbon fluxes through the catchment. In large, more heterogeneous catchments, streamflow dissolved organic carbon dynamics are regulated by the combined effect of hydrological mechanisms and the proportion of major landscape elements, such as wetland and forested areas. A number of studies have demonstrated that the amount of wetlands, especially peatlands, controls the watershed level transport of DOC in streams.The Penobscot River Watershed is located in north-central Maine and drains into the Gulf of Maine. It is the second largest watershed in New England. The Penobscot River Watershed is primarily forested but also contains extensive bogs, marshes, and wooded swamps.Studying the spatial and temporal changes in DOC export in the Penobscot River Watershed allows us to better understand and detect carbon sinks to carbon source shifts (or vice versa) in northern forested ecosystems.The Regional Hydro-Ecological Simulation System, is a physical process based terrestrial model that has the ability to simulate both the source and transportation of DOC by combining both hydrological and ecological processes. The study is focused on simulating the DOC concentration and flux with RHESSys in the Penobscot River Watershed. The simulated results are compared with field measurements of DOC from the watershed and the model results from the LOADEST and the temporal DOC export patterns are explored. Future changes in the amount of streamflow DOC will also be investigated by using projected land cover and climate change scenarios. Incremental increases in the loss of wetland areas have been implemented to explore the sensitivity of this watershed to wetland loss and progressive changes in forested land cover

Could combined sleep and pain evaluation be useful in the diagnosis of disorders of consciousness (DOC)? Preliminary findings.

Science.gov (United States)

Aricò, Irene; Naro, Antonino; Pisani, Laura Rosa; Leo, Antonino; Muscarà, Nunzio; De Salvo, Simona; Silvestri, Rosalia; Bramanti, Placido; Calabrò, Rocco Salvatore

2016-01-01

The diagnosis of Disorders of Consciousness (DOC) is still challenging. Indeed, ~ 40% of patients in vegetative state (VS) are misdiagnosed, suggesting the need of more appropriate diagnostic tools. Emerging data are showing that EEG, including sleep structure evaluation and multimodal evoked potential recording could be helpful in DOC diagnosis. Moreover, pain perception evaluation could further increase diagnosis accuracy in such individuals. Fourteen individuals with DOC, due to severe brain injury, were enrolled and admitted to the Intensive Neurorehabilitation Unit of the Research Institute. All patients were evaluated by means of the Coma Recovery Scale-Revised, a 24(hh)-polysomnography and a Laser Evoked Potential (LEP) paradigm. Clinically-defined patients in Minimally Consciousness State showed a more preserved sleep structure, physiologic hypnic figures and preserved REM/NREM sleep distribution than subjects in VS. LEP showed increased latencies and reduced amplitudes and were also detectable in patients with more structured sleep. The data support previous findings concerning the importance of sleep study in DOC diagnosis, with more specific neurophysiological paradigms. Interestingly, the findings shed some light on the possible correlations among global brain connectivity, sleep structure and pain perception, which are related to the activity of the wide thalamo-cortical and cortico-cortical networks underlying consciousness.

Association of ABCB1, β tubulin I, and III with multidrug resistance of MCF7/DOC subline from breast cancer cell line MCF7.

Science.gov (United States)

Li, Wentao; Zhai, Baoping; Zhi, Hui; Li, Yuhong; Jia, Linjiao; Ding, Chao; Zhang, Bin; You, Wei

2014-09-01

Docetaxel is a first-line chemotherapeutic agent for treating advanced breast cancer. The development of chemoresistance or multidrug resistance (MDR), however, results in breast cancer chemotherapy failure. This study aims to explore the molecular mechanisms underlying docetaxel-resistance in treatment of breast cancer. The docetaxel-resistant subline MCF7/DOC, derived from the parental sensitive breast cancer cell line MCF7, was established by intermittent exposure to moderate concentrations of docetaxel, followed by examination of its phenotypes. The MCF7/DOC subline showed cross resistance against paclitaxel, doxorubicin, methotrexate, and 5-Fu. Compared to the parental MCF7, MCF7/DOC cells were enlarged with heterogeneous sizes and a cobblestone and polygonal appearance. They were arrested at G2/M phase and proliferated slowly. The colony formation potential of MCF7/DOC in soft agar was significantly increased. MCF7/DOC cells showed reduced intracellular accumulation and increased efflux of rhodamine 123. The mRNA expression level of adenosine triphosphate binding cassette (ABC) transporter family, i.e., ABCB1, ABCC1, ABCC2, ABCG2, and β tubulin isotypes were characterized by quantitative PCR. High-level expression of ABCB1, βI, and βIII tubulin mRNA in MCF7/DOC was detected. Downregulation of ABCB1, βI, and βIII tubulin mediated by three combined siRNAs resulted in stronger growth inhibition of MCF7/DOC than inhibition of the expression of individual genes. ABCB1, βI, and βIII tubulin might contribute to the MDR of MCF7/DOC and be potential therapeutic targets for overcoming MDR of breast cancer.

Mobilisation and immobilisation of uranium-DOC-species in three waste dumps in the district of Schlema/Alberoda

International Nuclear Information System (INIS)

Kupsch, H.

1998-01-01

The modelling of geochemical processes needs the detailed and comprehensive knowledge of all chemical interactions which are able to exist in the flow path of waste dumps, soils and aquifer. This includes the adsorption, displacement and transport of heavy metal species of fulvic and humic acids which represent the main amount of DOC in the liquid / solid system of flow path. Comparative measurements of DOC concentrations in the input and output flow at the three waste dumps in the district Schlema / Alberoda have indicated that DOC is produced and / or supplied within of waste dumps. The speciation of heavy metal compounds of fulvic and humic acids was realized by means of two methods (sequential chromatographic analysis SCA; ions focussed electrophoresis IFE). Between 5 and 20% of uranium in the flow path exist in the form of fulvic and humic acids species in which the bond of uranium is permanently. Their distribution coefficients are strongly correlated with the pH values of the several geochemical systems. (orig.) [de

Utilizing Colored Dissolved Organic Matter to Derive Dissolved Black Carbon Export by Arctic Rivers

Science.gov (United States)

Stubbins, Aron; Spencer, Robert; Mann, Paul; Holmes, R.; McClelland, James; Niggemann, Jutta; Dittmar, Thorsten

2015-10-01

Wildfires have produced black carbon (BC) since land plants emerged. Condensed aromatic compounds, a form of BC, have accumulated to become a major component of the soil carbon pool. Condensed aromatics leach from soils into rivers, where they are termed dissolved black carbon (DBC). The transport of DBC by rivers to the sea is a major term in the global carbon and BC cycles. To estimate Arctic river DBC export, 25 samples collected from the six largest Arctic rivers (Kolyma, Lena, Mackenzie, Ob’, Yenisey and Yukon) were analyzed for dissolved organic carbon (DOC), colored dissolved organic matter (CDOM), and DBC. A simple, linear regression between DOC and DBC indicated that DBC accounted for 8.9 ± 0.3% DOC exported by Arctic rivers. To improve upon this estimate, an optical proxy for DBC was developed based upon the linear correlation between DBC concentrations and CDOM light absorption coefficients at 254 nm (a254). Relatively easy to measure a254 values were determined for 410 Arctic river samples between 2004 and 2010. Each of these a254 values was converted to a DBC concentration based upon the linear correlation, providing an extended record of DBC concentration. The extended DBC record was coupled with daily discharge data from the six rivers to estimate riverine DBC loads using the LOADEST modeling program. The six rivers studied cover 53% of the pan-Arctic watershed and exported 1.5 ± 0.1 million tons of DBC per year. Scaling up to the full area of the pan-Arctic watershed, we estimate that Arctic rivers carry 2.8 ± 0.3 million tons of DBC from land to the Arctic Ocean each year. This equates to ~8% of Arctic river DOC export, slightly less than indicated by the simpler DBC vs DOC correlation-based estimate. Riverine discharge is predicted to increase in a warmer Arctic. DBC export was positively correlated with river runoff, suggesting that the export of soil BC to the Arctic Ocean is likely to increase as the Arctic warms.

Utilizing Colored Dissolved Organic Matter to Derive Dissolved Black Carbon Export by Arctic Rivers

Directory of Open Access Journals (Sweden)

Aron eStubbins

2015-10-01

Full Text Available Wildfires have produced black carbon (BC since land plants emerged. Condensed aromatic compounds, a form of BC, have accumulated to become a major component of the soil carbon pool. Condensed aromatics leach from soils into rivers, where they are termed dissolved black carbon (DBC. The transport of DBC by rivers to the sea is a major term in the global carbon and BC cycles. To estimate Arctic river DBC export, 25 samples collected from the six largest Arctic rivers (Kolyma, Lena, Mackenzie, Ob’, Yenisey and Yukon were analyzed for dissolved organic carbon (DOC, colored dissolved organic matter (CDOM, and DBC. A simple, linear regression between DOC and DBC indicated that DBC accounted for 8.9 ± 0.3% DOC exported by Arctic rivers. To improve upon this estimate, an optical proxy for DBC was developed based upon the linear correlation between DBC concentrations and CDOM light absorption coefficients at 254 nm (a254. Relatively easy to measure a254 values were determined for 410 Arctic river samples between 2004 and 2010. Each of these a254 values was converted to a DBC concentration based upon the linear correlation, providing an extended record of DBC concentration. The extended DBC record was coupled with daily discharge data from the six rivers to estimate riverine DBC loads using the LOADEST modeling program. The six rivers studied cover 53% of the pan-Arctic watershed and exported 1.5 ± 0.1 million tons of DBC per year. Scaling up to the full area of the pan-Arctic watershed, we estimate that Arctic rivers carry 2.8 ± 0.3 million tons of DBC from land to the Arctic Ocean each year. This equates to ~8% of Arctic river DOC export, slightly less than indicated by the simpler DBC vs DOC correlation-based estimate. Riverine discharge is predicted to increase in a warmer Arctic. DBC export was positively correlated with river runoff, suggesting that the export of soil BC to the Arctic Ocean is likely to increase as the Arctic warms.

¹H, ¹³C, and ¹⁵N backbone and side-chain chemical shift assignment of the toxin Doc in the unbound state.

Science.gov (United States)

De Gieter, Steven; Loris, Remy; van Nuland, Nico A J; Garcia-Pino, Abel

2014-04-01

Toxin-antitoxin (TA) modules in bacteria are involved in pathogenesis, antibiotic stress response, persister formation and programmed cell death. The toxin Doc, from the phd/doc module, blocks protein synthesis by targeting the translation machinery. Despite a large wealth of biophysical and biochemical data on the regulatory aspects of the operon transcription and role of Doc co-activator and co-repressor, little is still know on the molecular basis of Doc toxicity. Structural information about this toxin is only available for its inhibited state bound to the antitoxin Phd. Here we report the (1)H, (15)N and (13)C backbone and side chain chemical shift assignments of the toxin Doc from of bacteriophage P1 (the model protein from this family of TA modules) in its free state. The BMRB accession number is 18899.

Isotope geochemistry and fluxes of carbon and organic matter in tropical small mountainous river systems and adjacent coastal waters of the Caribbean

Science.gov (United States)

Moyer, Ryan; Bauer, James; Grottoli, Andrea

2012-01-01

Recent studies have shown that small mountainous rivers (SMRs) may act as sources of aged and/or refractory carbon (C) to the coastal ocean, which may increase organic C burial at sea and subsidize coastal food webs and heterotrophy. However, the characteristics and spatial and temporal variability of C and organic matter (OM) exported from tropical SMR systems remain poorly constrained. To address this, the abundance and isotopic character (δ13C and Δ14C) of the three major C pools were measured in two Puerto Rico SMRs with catchments dominated by different land uses (agricultural vs. non-agricultural recovering forest). The abundance and character of C pools in associated estuaries and adjacent coastal waters were also examined. Riverine dissolved and particulate organic C (DOC and POC, respectively) concentrations were highly variable with respect to land use and sampling month, while dissolved inorganic C (DIC) was significantly higher at all times in the agricultural catchment. In both systems, riverine DOC and POC ranged from modern to highly aged (2,340 years before present), while DIC was always modern. The agricultural river and irrigation canals contained very old DOC (1,184 and 2,340 years before present, respectively), which is consistent with findings in temperate SMRs and indicates that these tropical SMRs provide a source of aged DOC to the ocean. During months of high river discharge, OM in estuarine and coastal waters had C isotope signatures reflective of direct terrestrial input, indicating that relatively unaltered OM is transported to the coastal ocean at these times. This is also consistent with findings in temperate SMRs and indicates that C transported to the coastal ocean by SMRs may differ from that of larger rivers because it is exported from smaller catchments that have steeper terrains and fewer land-use types.

Spatial patterns of DOC concentration and DOM optical properties in a Brazilian tropical river-wetland system

Science.gov (United States)

Dalmagro, Higo J.; Johnson, Mark S.; de Musis, Carlo R.; Lathuillière, Michael J.; Graesser, Jordan; Pinto-Júnior, Osvaldo B.; Couto, Eduardo G.

2017-08-01

The Cerrado (savanna) and Pantanal (wetland) biomes of Central Western Brazil have experienced significant development activity in recent decades, including extensive land cover conversion from natural ecosystems to agriculture and urban expansion. The Cuiabá River transects the Cerrado biome prior to inundating large areas of the Pantanal, creating one of the largest biodiversity hot spots in the world. We measured dissolved organic carbon (DOC) and the optical absorbance and fluorescence properties of dissolved organic matter (DOM) from 40 sampling locations spanning Cerrado and Pantanal biomes during wet and dry seasons. In the upper, more agricultural region of the basin, DOC concentrations were highest in the rainy season with more aromatic and humified DOM. In contrast, DOC concentrations and DOM optical properties were more uniform for the more urbanized middle region of the basin between wet and dry seasons, as well as across sample locations. In the lower region of the basin, wet season connectivity between the river and the Pantanal floodplain led to high DOC concentrations, a fourfold increase in humification index (HIX) (an indicator of DOM humification), and a 50% reduction in the spectral slope (SR). Basin-wide, wet season values for SR, HIX, and FI (fluorescence index) indicated an increasing representation of terrestrially derived DOM that was more humified. Parallel factor analysis identified two terrestrially derived components (C1 and C2) representing 77% of total fluorescing DOM (fDOM). A third, protein-like fDOM component increased markedly during the wet season within the more urban-impacted region.

CDOM fluorescence as a proxy of DOC concentration in natural waters : a comparison of four contrasting tropical systems

OpenAIRE

Rochelle Newall, Emma; Hulot, F. D.; Janeau, Jean-Louis; Merroune, A.

2014-01-01

Chromophoric dissolved organic matter (CDOM) fluorescence or absorption is often proposed as a rapid alternative to chemical methods for the estimation of bulk dissolved organic carbon (DOC) concentration in natural waters. However, the robustness of this method across a wide range of systems remains to be shown. We measured CDOM fluorescence and DOC concentration in four tropical freshwater and coastal environments (estuary and coastal, tropical shallow lakes, water from the freshwater lens ...

Watershed scale spatial variability in dissolved and total organic and inorganic carbon in contrasting UK catchments

Science.gov (United States)

Cumberland, S.; Baker, A.; Hudson, N. J.

2006-12-01

Approximately 800 organic and inorganic carbon analyses have been undertaken from watershed scale and regional scale spatial surveys in various British catchments. These include (1) a small (urban catchment (Ouseburn, N England); (2) a headwater, lowland agricultural catchment (River Tern, C England) (3) a large UK catchment (River Tyne, ~3000 sq-km) and (4) a spatial survey of ~300 analyses from rivers from SW England (~1700 sq-km). Results demonstrate that: (1) the majority of organic and inorganic carbon is in the dissolved (DOC and DIC) fractions; (2) that with the exception of peat rich headwaters, DIC concentration is always greater than DOC; (3) In the rural River Tern, riverine DOC and DIC are shown to follow a simple end- member mixing between DIC (DOC) rich (poor) ground waters and DOC (DIC) rich (poor) riparian wetlands for all sample sites. (4) In the urbanized Ouseburn catchment, although many sample sites also show this same mixing trend, some tributaries follow a pollutant trend of simultaneous increases in both DOC and DIC. The Ouseburn is part of the larger Tyne catchment: this larger catchment follows the simple groundwater DIC- soil water DOC end member mixing model, with the exception of the urban catchments which exhibit an elevated DIC compared to rural sites. (5) Urbanization is demonstrated to increase DIC compared to equivalent rural catchments; this DIC has potential sources including diffuse source inputs from the dissolution of concrete, point sources such as trade effluents and landfill leachates, and bedrock derived carbonates relocated to the soil dissolution zone by urban development. (6) DIC in rural SW England demonstrates that spatial variability in DIC can be attributed to variations in geology; but that DIC concentrations in the SW England rivers dataset are typically lower than the urbanized Tyne catchments despite the presence of carbonate bedrock in many of the sample catchments in the SW England dataset. (7) Recent

The Influence of Changes in Lifestyle and Mercury Exposure in Riverine Populations of the Madeira River (Amazon Basin near a Hydroelectric Project

Directory of Open Access Journals (Sweden)

Sandra S. Hacon

2014-02-01

Full Text Available In the Amazon Basin, naturally occurring methylmercury bioaccumulates in fish, which is a key source of protein consumed by riverine populations. The hydroelectric power-plant project at Santo Antônio Falls allows us to compare the Hg exposure of riverine populations sparsely distributed on both sides of the Madeira river before the area is to be flooded. From 2009 to 2011, we concluded a population survey of the area (N = 2,008; representing circa 80% of community residents that estimated fish consumption and mercury exposure of riverine populations with different degrees of lifestyle related to fish consumption. Fish samples from the Madeira river (N = 1,615 and 110 species were analyzed for Hg. Hair-Hg was significantly lower (p < 0.001 in less isolated communities near to the capital of Porto Velho (median 2.32 ppm than in subsistence communities in the Cuniã Lake, 180 km from Porto Velho city (median 6.3 ppm. Fish Hg concentrations ranged from 0.01 to 6.06 µg/g, depending on fish size and feeding behavior. Currently available fish in the Madeira river show a wide variability in Hg concentrations. Despite cultural similarities, riparians showed hair-Hg distribution patterns that reflect changes in fish-eating habits driven by subsistence characteristics.

Delivery of adjuvant sequential dose-dense FEC-Doc to patients with breast cancer is feasible, but dose reductions and toxicity are dependent on treatment sequence.

Science.gov (United States)

Wildiers, H; Dirix, L; Neven, P; Prové, A; Clement, P; Squifflet, P; Amant, F; Skacel, T; Paridaens, R

2009-03-01

This study prospectively investigates the impact of dose densification and altering sequence of fluorouracil, epirubicin and cyclophosphamide [FEC(100)] and docetaxel [Doc] on dose delivery and tolerability of adjuvant chemotherapy in breast cancer patients. 117 patients with high-risk primary operable breast cancer were randomized (1:1:2:2) to conventional (three cycles of 3-weekly FEC(100) then three cycles of 3-weekly Doc 100 mg/m(2) or reverse sequence) or dose-dense (dd) treatment (four 10- to 11-day cycles of FEC(75) then four 2-weekly cycles of Doc 75 mg/m(2), or the reverse). In the dd arms, pegfilgrastim was given on day 2 of each cycle, but only as secondary prophylaxis in conventional arms. The primary endpoint was the proportion of patients completing intended cycles at relative dose intensity >or=85% and this was achieved by 95% of patients in each group except for the ddDoc-->FEC group (90%). Dose intensity in the dd arms increased by 48% for FEC and 11% for docetaxel, compared with the conventional arms (both P Doc dose reductions were more frequent with dd treatment and when Doc was given after FEC. Grade 3-4 neutropenia was significantly more frequent with conventional treatment, while fatigue and hand-foot syndrome were numerically more common with dd treatment, particularly when Doc was given after FEC. Discussion Delivery of adjuvant sequential ddFEC and Doc is feasible with growth factor support, and chemotherapy sequence appeared to affect delivery of target doses and toxicity.

Spatial variations in geochemical characteristics of the modern Mackenzie Delta sedimentary system

NARCIS (Netherlands)

Vonk, Jorien E.|info:eu-repo/dai/nl/370832833; Giosan, Liviu; Blusztajn, Jerzy; Montlucon, Daniel; Graf Pannatier, Elisabeth; McIntyre, Cameron; Wacker, Lukas; Macdonald, Robie W.; Yunker, Mark B.; Eglinton, Timothy I.

2015-01-01

The Mackenzie River in Canada is by far the largest riverine source of sediment and organic carbon (OC) to the Arctic Ocean. Therefore the transport, degradation and burial of OC along the land-to-ocean continuum for this riverine system is important to study both regionally and as a dominant

The Role of Dissolved Organic Carbon and Preadaptation in the Biotransformation of Trace Organic Chemicals during Aquifer Recharge and Recovery

KAUST Repository

Ouf, Mohamed

2012-05-01

Aquifer recharge and recovery (ARR) is a low-cost and environmentally-friendly treatment technology which uses conventionally treated wastewater effluent for groundwater recharge and subsequent recovery for agricultural, industrial or drinking water uses. This study investigated the effect of different dissolved organic carbon (DOC) composition in wastewater effluent on the fate of trace organic chemicals (TOrCs) during ARR. Four biologically active columns were setup receiving synthetic wastewater effluent with varying DOC compositions. The difference in DOC composition triggered variations in the microbial community’s diversity and hence its ability to degrade TOrCs. It was found that the presence of protein-like DOC enhances the removal of DOC in comparison with the presence of humic-like DOC. On the other hand, the presence of humic-like DOC, which is more difficult to degrade, improved the removal of several degradable TOrCs. Other column experiments were also carried out to investigate the role of previous and continuous exposure to TOrCs in their removal. The use of soil pre-exposed to low concentrations of TOrCs and DOC provided better removal of both DOC and TOrCs. The findings of this study suggest that the presence of more humic-like DOC in the effluent enhances the biotransformation of TOrCs during ARR. In addition, long exposure to both DOC and TOrCs increases the degree of their removal over time

A MIXED METHODS ANALYSIS OF THE EFFECT OF GOOGLE DOCS ENVIRONMENT ON EFL LEARNERS’ WRITING PERFORMANCE AND CAUSAL ATTRIBUTIONS FOR SUCCESS AND FAILURE

Directory of Open Access Journals (Sweden)

Zari Sadat SEYYEDREZAIE

2016-07-01

Full Text Available This study investigated the effect of writing process in Google Docs environment on Iranian EFL learners’ writing performance. It also examined students’ perceptions towards the effects of Google Docs and their perceived causes of success or failure in writing performance. In this regard, 48 EFL students were chosen based on their IELTs writing test scores. During the treatment, the students were taught how to write a formal five-paragraph essay in the class, but they were supposed to practice writing process and give feedback to their peers’ essays through Google Docs. At the end of the treatment phase, the participants received another sample of IELTs writing test (posttest. Moreover, 20 participants were interviewed for their perceptions regarding the causes for their success and failure and the influence of Google Docs on their writing performance. The analysis of a Paired-Sample t-test revealed that Google Docs played an effective role in improving students’ writing performance. In addition, the analysis of interview revealed that the students perceived both internal and external causes for their success and failure; but in case of failure, internal factors were cited more often than external ones. Also, it was revealed that students generally showed positive attitude towards the implication of Google Docs as a factor leading to success in their writing performance.

Photodegradation of estrone enhanced by dissolved organic matter under simulated sunlight

KAUST Repository

Caupos, Emilie

2011-05-01

In the present work the degradation of estrone (E1) a natural estrogenic hormone has been studied under simulated solar irradiation. The photodegradation of E1 has been investigated in the absence and in the presence of 7.7-8.9 mg L-1 of dissolved organic carbon (DOC), under solar light simulation with irradiance approximating that of the sun. DOC extracts from different origins have been used. Half-lives ranging between 3.9 h and 7.9 h were observed. Results indicated that E1 was photodegraded even in the absence of DOC. The presence of DOC was found to enhance the degradation of E1. Experiments performed with the addition of reactive species scavengers (azide ions and 2-propanol) have shown that these two species play a significant role in the photodegradation. Some experiments have been performed with a DOC previously submitted to solar irradiation. Changes in optical and physico-chemical properties of DOC strongly affect its photoinductive properties, and hence its efficiency on E1 degradation. A part of the study consisted in the investigation of photoproducts structures. Five photoproducts were shown by chromatographic analysis: one arising from direct photolysis and the four others from DOC photoinduced degradation. © 2011 Elsevier Ltd.

Photodegradation of estrone enhanced by dissolved organic matter under simulated sunlight

KAUST Repository

Caupos, Emilie; Mazellier, Patrick; Croue, Jean-Philippe

2011-01-01

In the present work the degradation of estrone (E1) a natural estrogenic hormone has been studied under simulated solar irradiation. The photodegradation of E1 has been investigated in the absence and in the presence of 7.7-8.9 mg L-1 of dissolved organic carbon (DOC), under solar light simulation with irradiance approximating that of the sun. DOC extracts from different origins have been used. Half-lives ranging between 3.9 h and 7.9 h were observed. Results indicated that E1 was photodegraded even in the absence of DOC. The presence of DOC was found to enhance the degradation of E1. Experiments performed with the addition of reactive species scavengers (azide ions and 2-propanol) have shown that these two species play a significant role in the photodegradation. Some experiments have been performed with a DOC previously submitted to solar irradiation. Changes in optical and physico-chemical properties of DOC strongly affect its photoinductive properties, and hence its efficiency on E1 degradation. A part of the study consisted in the investigation of photoproducts structures. Five photoproducts were shown by chromatographic analysis: one arising from direct photolysis and the four others from DOC photoinduced degradation. © 2011 Elsevier Ltd.

Biophysical processes affecting DOM dynamics at the Arno river mouth (Tyrrhenian Sea).

Science.gov (United States)

Retelletti Brogi, S; Gonnelli, M; Vestri, S; Santinelli, C

2015-02-01

Dissolved organic carbon (DOC) and optical properties (absorption and fluorescence) of chromophoric dissolved organic matter (CDOM) were measured in October 2012, at the Arno river mouth and in a coastal station close to it. The data reported indicates that the Arno river represents an important source of DOC and CDOM to this coastal area, with a total DOC flux of 11.23-12.04 · 10(9)g C · y(-1). Moving from the river to the sea, CDOM absorption and fluorescence decreased, while the spectral slope increased, suggesting a change in the molecular properties of CDOM. Mineralization experiments were carried out in order to investigate the main processes of DOM removal and/or transformation in riverine and coastal water. DOC removal rates were 20 μM · month(-1) in the river and 3 μM · month(-1) in the seawater, while CDOM was released during the first 30 days and removed in the following 40 days. Copyright © 2014 Elsevier B.V. All rights reserved.

Spatiotemporal Characterization of Chromophoric Dissolved Organic Matter (CDOM) and CDOM-DOC Relationships for Highly Polluted Rivers

OpenAIRE

Sijia Li; Jiquan Zhang; Guangyi Mu; Hanyu Ju; Rui Wang; Danjun Li; Ali Hassan Shabbir

2016-01-01

Spectral characteristics of CDOM (Chromophoric dissolved organic matter) in water columns are a key parameter for bio-optical modeling. Knowledge of CDOM optical properties and spatial discrepancy based on the relationship between water quality and spectral parameters in the Yinma River watershed with in situ data collected from highly polluted waters are exhibited in this study. Based on the comprehensive index method, the riverine waters showed serious contamination; especially the chemical...

Interbasin water transfer, riverine connectivity, and spatial controls on fish biodiversity

Science.gov (United States)

Grant, Evan H. Campbell; Lynch, Heather J.; Muneepeerakul, Rachata; Muthukumarasamy, Arunachalam; Rodríguez-Iturbe, Ignacio; Fagan, William F.

2012-01-01

Background Large-scale inter-basin water transfer (IBWT) projects are commonly proposed as solutions to water distribution and supply problems. These problems are likely to intensify under future population growth and climate change scenarios. Scarce data on the distribution of freshwater fishes frequently limits the ability to assess the potential implications of an IBWT project on freshwater fish communities. Because connectivity in habitat networks is expected to be critical to species' biogeography, consideration of changes in the relative isolation of riverine networks may provide a strategy for controlling impacts of IBWTs on freshwater fish communities Methods/Principal Findings Using empirical data on the current patterns of freshwater fish biodiversity for rivers of peninsular India, we show here how the spatial changes alone under an archetypal IBWT project will (1) reduce freshwater fish biodiversity system-wide, (2) alter patterns of local species richness, (3) expand distributions of widespread species throughout peninsular rivers, and (4) decrease community richness by increasing inter-basin similarity (a mechanism for the observed decrease in biodiversity). Given the complexity of the IBWT, many paths to partial or full completion of the project are possible. We evaluate two strategies for step-wise implementation of the 11 canals, based on economic or ecological considerations. We find that for each step in the project, the impacts on freshwater fish communities are sensitive to which canal is added to the network. Conclusions/Significance Importantly, ecological impacts can be reduced by associating the sequence in which canals are added to characteristics of the links, except for the case when all 11 canals are implemented simultaneously (at which point the sequence of canal addition is inconsequential). By identifying the fundamental relationship between the geometry of riverine networks and freshwater fish biodiversity, our results will aid in

Evidence for major input of riverine organic matter into the ocean

Science.gov (United States)

Cao, Xiaoyan; Aiken, George R.; Butler, Kenna D.; Huntington, Thomas G.; Balch, William M.; Mao, Jingdong; Schmidt-Rohr, Klaus

2018-01-01

The changes in the structure of XAD-8 isolated dissolved organic matter (DOM) samples along a river (Penobscot River) to estuary (Penobscot Bay) to ocean (across the Gulf of Maine) transect and from the Pacific Ocean were investigated using selective and two dimensional (2D) nuclear magnetic resonance (NMR) spectroscopy coupled with elemental and carbon isotope analysis. The results provide important insights into the nature of relatively stable structures in the river-to-ocean continuum and the enigma of the fate of terrestrial DOM in the marine system. First, lignin and carboxyl-rich alicyclic molecules (CRAMs), which are indistinguishable from mass spectrometry, were clearly differentiated with NMR spectroscopy. NMR unambiguously showed that CRAMs persisted along the river-to-ocean transect and in the Pacific Ocean, while lignin residues dramatically decreased in abundance from the river to the coastal ocean and the Pacific Ocean. The results challenge a previous conclusion that lignin-derived compounds are refractory and can accumulate in the coastal ocean. The loss of terrestrial plant-derived aromatic compounds such as lignin and tannin residues throughout the sequence of riverine, coastal, and open ocean DOM extracts could also partially explain the decreasing organic carbon recovery by XAD-8 isolation and the change in carbon stable isotope composition from riverine DOM (δ13C −27.6‰) to ocean DOM (δ13C −23.0‰) extracts. The observation, from advanced NMR, of similar CRAM molecules in XAD-8 isolated DOM samples from the Penobscot River to the Penobscot Bay and from the ocean refutes a previous conclusion that XAD-isolated DOM samples from seawater and river are distinctly different. The alicyclic structural features of CRAMs and their presence as the major structural units in DOM extracts from the Penobscot River to Gulf of Maine transect, together with the deduced old 14C age of CRAMs in the ocean, imply that terrestrial CRAMs may persist on

Molecular insights into the microbial formation of marine dissolved organic matter: recalcitrant or labile?

Science.gov (United States)

Koch, B. P.; Kattner, G.; Witt, M.; Passow, U.

2014-08-01

The degradation of marine dissolved organic matter (DOM) is an important control variable in the global carbon cycle. For our understanding of the kinetics of organic matter cycling in the ocean, it is crucial to achieve a mechanistic and molecular understanding of its transformation processes. A long-term microbial experiment was performed to follow the production of non-labile DOM by marine bacteria. Two different glucose concentrations and dissolved algal exudates were used as substrates. We monitored the bacterial abundance, concentrations of dissolved and particulate organic carbon (DOC, POC), nutrients, amino acids and transparent exopolymer particles (TEP) for 2 years. The molecular characterization of extracted DOM was performed by ultrahigh resolution Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS) after 70 days and after ∼2 years of incubation. Although glucose quickly degraded, a non-labile DOC background (5-9% of the initial DOC) was generated in the glucose incubations. Only 20% of the organic carbon from the algal exudate degraded within the 2 years of incubation. The degradation rates for the non-labile DOC background in the different treatments varied between 1 and 11 μmol DOC L-1 year-1. Transparent exopolymer particles, which are released by microorganisms, were produced during glucose degradation but decreased back to half of the maximum concentration within less than 3 weeks (degradation rate: 25 μg xanthan gum equivalents L-1 d-1) and were below detection in all treatments after 2 years. Additional glucose was added after 2 years to test whether labile substrate can promote the degradation of background DOC (co-metabolism; priming effect). A priming effect was not observed but the glucose addition led to a slight increase of background DOC. The molecular analysis demonstrated that DOM generated during glucose degradation differed appreciably from DOM transformed during the degradation of the algal exudates. Our

Hydrologic controls on DOC, As and Pb export from a polluted peatland - the importance of heavy rain events, antecedent moisture conditions and hydrological connectivity

Science.gov (United States)

Broder, T.; Biester, H.

2015-08-01

Bogs can store large amounts of lead (Pb) and arsenic (As) from atmospheric deposition of anthropogenic emissions. Pb and As are exported along with dissolved organic carbon (DOC) from these organic-rich systems, but it is not yet clear which hydrological (pre)conditions favor their export. This study combines a 1-year monitoring of precipitation, bog water level and pore water concentration changes with bog discharge and DOC, iron, As and Pb stream concentrations. From these data, annual DOC, As, and Pb exports were calculated. Concentrations ranged from 5 to 30 mg L-1 for DOC, 0.2 to 1.9 μg L-1 for As, and 1.3 to 12 μg L-1 for Pb, with highest concentrations in late summer. As and Pb concentrations significantly correlated with DOC concentrations. Fluxes depended strongly on discharge, as 40 % of As and 43 % of Pb were exported during 10 % of the time with the highest discharge, pointing out the over-proportional contribution of short-time, high-discharge events to annual As, Pb and DOC export. Exponential increase in element export from the bog is explained by connection of additional DOC, As and Pb pools in the acrotelm during water table rise, which is most pronounced after drought. Pb, As and DOC concentrations in pore water provide evidence of an increase in the soluble Pb pool as soon as the peat layer becomes hydrologically connected, while DOC and As peak concentrations in runoff lag behind in comparison to Pb. Our data indicate a distinct bog-specific discharge threshold of 8 L s-1, which is thought to depend mainly on the bogs size and drainage conditions. Above this threshold, element concentrations do not further increase and discharge becomes diluted. Combining pore water and discharge data shows that As and Pb exports are dependent on not only the amount of precipitation and discharge but also on the frequency and depth of water table fluctuations. Comparing the annual bog As and Pb export with element inventories indicates that As is much more

Seasonal Dynamics of Dissolved Organic Carbon Under Complex Circulation Schemes on a Large Continental Shelf: The Northern South China Sea

Science.gov (United States)

Meng, Feifei; Dai, Minhan; Cao, Zhimian; Wu, Kai; Zhao, Xiaozheng; Li, Xiaolin; Chen, Junhui; Gan, Jianping

2017-12-01

We examined the distribution and seasonality of dissolved organic carbon (DOC) based on a large data set collected from the northern South China Sea (NSCS) shelf under complex circulation schemes influenced by river plume, coastal upwelling, and downwelling. The highest surface values of ˜117 μmol L-1 were observed nearshore in summer suggesting high DOC supplies from the river inputs, whereas the lowest surface values of ˜62 μmol L-1 were on the outer shelf in winter due to entrainment of DOC-poor subsurface water under strengthened vertical mixing. While the summer coastal upwelling brought lower DOC from offshore depth to the nearshore surface, the winter coastal downwelling delivered higher surface DOC to the midshelf deep waters from the inner shelf fueled by the China Coastal Current (CCC) transporting relatively high DOC from the East China Sea to the NSCS. The intensified winter downwelling generated a cross-shelf DOC transport of 3.1 × 1012 g C over a large shelf area, which induced a significant depression of the NSCS DOC inventory in winter relative to in autumn. In addition to the variable physical controls, net biological production of DOC was semiquantified in both the river plume (2.8 ± 3.0 μmol L-1) and coastal upwelling (3.1 ± 1.3 μmol L-1) in summer. We demonstrated that the NSCS shelf had various origins of DOC including riverine inputs, inter-shelf transport and in situ production. Via cross-shelf transport, the accumulated DOC would be exported to and stored in the deep ocean, suggesting that continental shelves are a potentially effective carbon sink.

Bacterioplankton features and its relations with doc characteristics and other limnological variables in Paraná river floodplain environments (PR/MS-Brazil).

Science.gov (United States)

Teixeira, Mariana Carolina; Santana, Natália Fernanda; de Azevedo, Júlio César Rodrigues; Pagioro, Thomaz Aurélio

2011-07-01

Since the introduction of the Microbial Loop concept, many studies aimed to explain the role of bacterioplankton and dissolved organic carbon (DOC) in aquatic ecosystems. Paraná River floodplain system is a very complex environment where these subjects were little explored. The aim of this work was to characterize bacterial community in terms of density, biomass and biovolume in some water bodies of this floodplain and to verify its temporal variation and its relation with some limnological variables, including some indicators of DOC quality, obtained through Ultraviolet-visible (UV-VIS) and fluorescence spectroscopic analysis. Bacterial density, biomass and biovolume are similar to those from other freshwater environments and both density and biomass were higher in the period with less rain. The limnological and spectroscopic features that showed any relation with bacterioplankton were the concentrations of N-NH4 and P-PO4, water transparency, and some indicators of DOC quality and origin. The analysis of these relations showed a possible competition between bacterioplankton and phytoplankton for inorganic nutrients and that the DOC used by bacterioplankton is labile and probably from aquatic macrophytes.

An Alternative to EPA Method 9 -- Field Validation of the Digital Opacity Compliance System (DOCS)

National Research Council Canada - National Science Library

Rasmussen, Steve L; Stone, Daniel A

2005-01-01

The Digital Opacity Compliance System (DOCS) software translates images from a commercial digital camera into visual plume opacity measurements, and is proposed as an alternate reporting method to EPA Method 9...

Metacommunity theory as a multispecies, multiscale framework for studying the influence of river network structure on riverine communities and ecosystems

Science.gov (United States)

Brown, B.L.; Swan, C.M.; Auerbach, D.A.; Campbell, Grant E.H.; Hitt, N.P.; Maloney, K.O.; Patrick, C.

2011-01-01

Explaining the mechanisms underlying patterns of species diversity and composition in riverine networks is challenging. Historically, community ecologists have conceived of communities as largely isolated entities and have focused on local environmental factors and interspecific interactions as the major forces determining species composition. However, stream ecologists have long embraced a multiscale approach to studying riverine ecosystems and have studied both local factors and larger-scale regional factors, such as dispersal and disturbance. River networks exhibit a dendritic spatial structure that can constrain aquatic organisms when their dispersal is influenced by or confined to the river network. We contend that the principles of metacommunity theory would help stream ecologists to understand how the complex spatial structure of river networks mediates the relative influences of local and regional control on species composition. From a basic ecological perspective, the concept is attractive because new evidence suggests that the importance of regional processes (dispersal) depends on spatial structure of habitat and on connection to the regional species pool. The role of local factors relative to regional factors will vary with spatial position in a river network. From an applied perspective, the long-standing view in ecology that local community composition is an indicator of habitat quality may not be uniformly applicable across a river network, but the strength of such bioassessment approaches probably will depend on spatial position in the network. The principles of metacommunity theory are broadly applicable across taxa and systems but seem of particular consequence to stream ecology given the unique spatial structure of riverine systems. By explicitly embracing processes at multiple spatial scales, metacommunity theory provides a foundation on which to build a richer understanding of stream communities.

Phylogeography and Sex-Biased Dispersal across Riverine Manatee Populations (Trichechus inunguis and Trichechus manatus) in South America

OpenAIRE

Satiz?bal, Paula; Mignucci-Giannoni, Antonio A.; Duch?ne, Sebasti?n; Caicedo-Herrera, Dalila; Perea-Sicchar, Carlos M.; Garc?a-D?vila, Carmen R.; Trujillo, Fernando; Caballero, Susana J.

2012-01-01

Phylogeographic patterns and sex-biased dispersal were studied in riverine populations of West Indian (Trichechus manatus) and Amazonian manatees (T. inunguis) in South America, using 410bp D-loop (Control Region, Mitochondrial DNA) sequences and 15 nuclear microsatellite loci. This multi-locus approach was key to disentangle complex patterns of gene flow among populations. D-loop analyses revealed population structuring among all Colombian rivers for T. manatus, while microsatellite data sug...

1179-1187suppl.doc

Indian Academy of Sciences (India)

2.11 Application: Dynamic adsorption 8 ... Surface area was determined using N2 adsorption at 77 K using Micromeritics ASAP 2020 surface analyzer . .... A SETSYS TGA-DTA 10 instrument was used to determine the thermal degradation and stability behaviour of BC, CTS/BC, CTS/BC/PMAA under air using Al2O3 crucible ...

Alchornea cordifolia (Schumach. & Thonn.) Muell. Arg. (Euphorbiaceae), a disjunct Guineo-Congolian tree found in Ethiopia as dominant in riverine forest

DEFF Research Database (Denmark)

Friis, Ib; Harris, Timothy

2013-01-01

The small Guineo-Congolian tree Alchornea cordifolia (Euphorbiaceae) has been observed to dominate the undergrowth in an open type of southwest Ethiopian riverine forest not recorded before. The nearest previously known records of this species were at the South Sudan–Congo border and in Uganda...

Miniature circulatory systems: A new exposure system for ecotoxicological effect assessments in riverine organisms.

Science.gov (United States)

Feiner, Mona; Beggel, Sebastian; Geist, Juergen

2016-11-01

Long-term effect assessments in ecotoxicological investigations are important, yet there is a lack of suitable exposure systems for these experiments that can be used for riverine species. A cost-efficient miniature circulatory system was developed that was evaluated for its applicability in long-term exposures in 2 stream-dwelling species: brown trout (Salmo trutta) and an amphipod (Gammarus roeseli). In an egg-to-fry exposure of S. trutta, the toxicity of 2 reverse osmosis concentrates was investigated as examples. Control hatching rate of yolk sac fry was 75 ± 7% and thus complies with the Organisation for Economic Co-operation and Development validity criterion (≥66%). The reverse osmosis concentrates did not impair the hatching rate in any tested concentration. In G. roeseli, mortality rates remained below 20% during a 21-d cultivation, fulfilling the common validity criterion in ecotoxicological testing. Mortality was significantly lower when the species was fed with conditioned alder leaves instead of an artificial shrimp food. Finally, a toxicity test on G. roeseli using copper as the test substance revealed median lethal concentration (LC50) values of 156 μg/L after 96 h and 99 μg/L after 264 h, which is in line with literature findings using other accepted exposure units. In conclusion, the miniature circulatory system provides a novel and cost-efficient exposure system for long-term investigations on riverine species that may also be applicable for other species of fishes and macroinvertebrates. Environ Toxicol Chem 2016;35:2827-2833. © 2016 SETAC. © 2016 SETAC.

Partial coupling and differential regulation of biologically and photo-chemically labile dissolved organic carbon across boreal aquatic networks

Science.gov (United States)

Lapierre, J.-F.; del Giorgio, P. A.

2014-05-01

Despite the rapidly increasing volume of research on the biological and photochemical degradation of DOC in aquatic environments, little is known on the large-scale patterns in biologically and photo-chemically degradable DOC (Bd-DOC and Pd-DOC, respectively) in continental watersheds, and on the links that exist between these two key properties that greatly influence the flow of carbon from continents to oceans. Here we explore the patterns of Bd- and Pd-DOC across hundreds of boreal lakes, rivers and wetlands spanning a large range of system trophy and terrestrial influence, and compared the drivers of these two reactive pools of DOC at the landscape level. Using standardized incubations of natural waters, we found that the concentrations of Bd- and Pd-DOC co-varied across all systems studied but were nevertheless related to different pools of dissolved organic matter (DOM, identified by fluorescence analyses) in ambient waters. A combination of nutrients and protein-like DOM explained nearly half of the variation in Bd-DOC, whereas Pd-DOC was exclusively predicted by DOM optical properties, consistent with the photochemical degradability of specific fluorescent DOM (FDOM) pools that we experimentally determined. The concentrations of colored DOM (CDOM), a proxy of terrestrial influence, almost entirely accounted for the observed relationship between FDOM and the concentrations of both Bd- and Pd-DOC. The concentrations of CDOM and of the putative bio-labile fluorescence component shifted from complete decoupling in clear-water environments to strong coupling in browner streams and wetlands. This suggests a baseline autochthonous Bd-DOC pool fuelled by internal production that is gradually overwhelmed by land-derived Bd-DOC as terrestrial influence increases across landscape gradients. The importance of land as a major source of both biologically and photo-chemically degradable DOC for continental watersheds resulted in a partial coupling of those carbon pools in

Exploring the Roles of Google.doc and Peer e-Tutors in English Writing

Science.gov (United States)

Lin, Wen-Chuan; Yang, Shu Ching

2013-01-01

This study explored college students' experiences with and perceptions of integrating both the Google.doc and peer e-tutors into an English writing course. This socio-cultural study employed online collaborative learning mechanisms with an attempt to develop students' English writing skills and motivation over the course of one year. Participants…

Dynamics of dissolved organic matter in riverine sediments affected by weir impoundments: Production, benthic flux, and environmental implications.

Science.gov (United States)

Chen, Meilian; Kim, Sung-Han; Jung, Heon-Jae; Hyun, Jung-Ho; Choi, Jung Hyun; Lee, Hyo-Jin; Huh, In-Ae; Hur, Jin

2017-09-15

In order to understand the characteristics and dynamics of dissolved organic matter (DOM) in the sediment of rivers affected by impoundments, we examined the vertical profiles and the benthic fluxes of DOM in four different core sediments located at upstream sites of weirs in major rivers of South Korea. In three out of four sites, exponential accumulation of dissolved organic carbon (DOC) with depth was observed with the signature of seasonal variability. Except for the site displaying a below-detection limit of Fe(II), the general accumulation trends of DOC with depth was concurrent with the increases of Fe(II) and NH 4 + and the decrease of PO 4 3- , signifying a close linkage of the DOM dynamics with anaerobic respiration via iron reduction, an important early diagenesis pathway. The estimated benthic fluxes from the cores revealed that the sediments likely serve as DOC, chromophoric DOM (CDOM), and fluorescent DOM (FDOM) sources to the overlying water. The benthic effluxes based on DOC were comparable to the ranges previously reported in lake and coastal areas, and those of CDOM and FDOM showed even higher levels. These findings imply that impoundment-affected river systems would change the DOM composition of the overlying water, ultimately influencing the subsequent water treatment processes such as disinfection byproducts production and membrane fouling. A simple mass balance model indicated that the impoundment-affected river sediments may operate as a net carbon sink in the environments due to a greater extent of sedimentation compared to the estimated benthic efflux and sediment biological respiration. Copyright © 2017 Elsevier Ltd. All rights reserved.

3D FEM Analysis of a Pile-Supported Riverine Platform under Environmental Loads Incorporating Soil-Pile Interaction

Directory of Open Access Journals (Sweden)

Denise-Penelope N. Kontoni

2018-01-01

Full Text Available An existing riverine platform in Egypt, together with its pile group foundation, is analyzed under environmental loads using 3D FEM structural analysis software incorporating soil-pile interaction. The interaction between the transfer plate and the piles supporting the platform is investigated. Two connection conditions were studied assuming fixed or hinged connection between the piles and the reinforced concrete platform for the purpose of comparison of the structural behavior. The analysis showed that the fixed or hinged connection condition between the piles and the platform altered the values and distribution of displacements, normal force, bending moments, and shear forces along the length of each pile. The distribution of piles in the pile group affects the stress distribution on both the soil and platform. The piles were found to suffer from displacement failure rather than force failure. Moreover, the resulting bending stresses on the reinforced concrete plate in the case of a fixed connection between the piles and the platform were almost doubled and much higher than the allowable reinforced concrete stress and even exceeded the ultimate design strength and thus the environmental loads acting on a pile-supported riverine offshore platform may cause collapse if they are not properly considered in the structural analysis and design.

First evidence of the possible implication of the 11-deoxycorticosterone (DOC) in immune activity of Eurasian perch (Perca fluviatilis, L.): comparison with cortisol.

Science.gov (United States)

Mathieu, Cédric; Milla, Sylvain; Mandiki, S N M; Douxfils, Jessica; Douny, Caroline; Scippo, Marie-Louise; De Pauw, Edwin; Kestemont, Patrick

2013-06-01

Cortisol, the main corticosteroid in fish, is frequently described as a modulator of fish immune system. Moreover, 11-deoxycorticosterone (DOC) was shown to bind and transcriptionally activate the mineralocorticoid receptor and may act as a mineralocorticoid in fish. Immune modulations induced by intraperitoneal injections of these two corticosteroids were assessed in Eurasian perch juveniles. Cortisol and DOC were injected at 0.8 mg kg(-1) and 0.08 mg kg(-1) body weight respectively. Cortisol increased plasma lysozyme activity 72 h post-injection, C-type lysozyme expression in spleen from 1 to 72 h post-injection, and favoured blood neutrophils at the expense of a mixture of lymphocytes and thrombocytes. Moreover, 6 h after injection, cortisol reduced expression levels of the pro-inflammatory cytokine TNF-α in spleen. DOC had no effects on the immune variables measured in plasma, but increased expression levels of C-type lysozyme and apolipoprotein A1 mRNA in both gills and spleen. Meanwhile, DOC stimulated its putative signalling pathway by increasing expression of mineralocorticoid receptor and 11β-hydroxysteroid dehydrogenase-2 in spleen. These results confirmed the role of cortisol as an innate, short term immune stimulator. For the first time, DOC is described as a possible immune stimulator in fish. Copyright © 2013 Elsevier Inc. All rights reserved.

Characterizing the parent and alkyl polycyclic aromatic hydrocarbons in the Pearl River Estuary, Daya Bay and northern South China Sea: Influence of riverine input

International Nuclear Information System (INIS)

Yuan, Ke; Wang, Xiaowei; Lin, Li; Zou, Shichun; Li, Yan; Yang, Qingshu; Luan, Tiangang

2015-01-01

Distributions of 31 parent polycyclic aromatic hydrocarbons (PAHs) and 29 alkyl PAHs in surface sediments of the Pearl River Estuary (PRE), Daya Bay (DYB) and northern South China Sea (SCS) were examined to study the influence of riverine input. It was found that the contributions of riverine input to sediment PAHs in PRE was much higher than other areas. However, higher proportion of alkyl PAHs and low molecular weight PAHs in DYB and the northern SCS was observed, indicating their different sources. Nevertheless, the sediment PAHs in PRE were heterogeneous and affected by the hydrodynamic conditions. The high molecular weight PAHs were dominant in PRE and enriched in the depositional area of suspended particular matter (SPM). Moreover, the concentration of PAHs in SPM was similar to those in surface sediments and dominated in water columns. Therefore, SPM played a very important role in transportation and distribution of PAHs in PRE. - Highlights: • EPA 16 PAHs contributed a small amount of total PAHs. • Alkyl PAHs showed different behaviors from parent PAHs. • High weight PAHs preferably indicated riverine input. • PAHs distribution in sediment was related with the suspended particle deposition. - Suspended particular matter played a very important role in distribution of PAHs in tide-dominated estuary and alkyl PAHs showed different behavior from parent PAHs

Effects of gamma-sterilization on DOC, uranium and arsenic remobilization from organic and microbial rich stream sediments

International Nuclear Information System (INIS)

Schaller, Joerg; Weiske, Arndt; Dudel, E. Gert

2011-01-01

Organic-rich sediments are known to be effective accumulators for uranium and arsenic. Much is known about the capacity for metal or metalloid fixation by microbes and organic compounds as well as inorganic sediment particles. Experiments investigating the effect of microbes on the process of metal fixation in sediments require sterilized sediments as control treatment which is often realized by gamma-sterilization. Only few studies show that gamma-sterilization has an effect on the remobilization of metal and metalloids and on their physico-chemical properties. These studies deal with sediments with negligible organic content whereas almost nothing is known about organic-rich sediments including a probably high microbial activity. In view of this, we investigated the effect of gamma-sterilization of organic-rich sediments on uranium and arsenic fixation and release. After ten days within an exposure experiment we found a significant higher remobilization of uranium and arsenic in sterile compared to unsterile treatments. In line with these findings the content of dissolved organic carbon (DOC), manganese, and iron increased to even significantly higher concentration in the sterile compared to unsterile treatment. Gamma-sterilization seems to change the physico-chemical properties of organic-rich sediments. Microbial activity is effectively eliminated. From increased DOC concentrations in overlaying water it is concluded that microbes are eventually killed with leaching of cellular compounds in the overlaying water. This decreases the adsorption capacity of the sediment and leads to enhanced uranium and arsenic remobilization. - Research highlight s : →Remobilization of uranium and arsenic is higher in gamma-sterile treatments. →DOC mobilization is also higher in sterilized treatment. →Adsorption capacity in sediments is reduced by release of DOC.

Bacterioplankton features and its relations with doc characteristics and other limnological variables in Paraná river floodplain environments (PR/MS-Brazil

Directory of Open Access Journals (Sweden)

Mariana Carolina Teixeira

2011-09-01

Full Text Available Since the introduction of the Microbial Loop concept, many studies aimed to explain the role of bacterioplankton and dissolved organic carbon (DOC in aquatic ecosystems. Paraná River floodplain system is a very complex environment where these subjects were little explored. The aim of this work was to characterize bacterial community in terms of density, biomass and biovolume in some water bodies of this floodplain and to verify its temporal variation and its relation with some limnological variables, including some indicators of DOC quality, obtained through Ultraviolet-visible (UV-VIS and fluorescence spectroscopic analysis. Bacterial density, biomass and biovolume are similar to those from other freshwater environments and both density and biomass were higher in the period with less rain. The limnological and spectroscopic features that showed any relation with bacterioplankton were the concentrations of N-NH4 and P-PO4, water transparency, and some indicators of DOC quality and origin. The analysis of these relations showed a possible competition between bacterioplankton and phytoplankton for inorganic nutrients and that the DOC used by bacterioplankton is labile and probably from aquatic macrophytes.

Variable relationships of DOC with oxygen in the northwestern Indian Ocean and their ecological implications

Digital Repository Service at National Institute of Oceanography (India)

Rajendran, A.; DileepKumar, M.; Ramaiah, N.; Ittekkot, V.; Desai, B.N.

characterizEd. by the reducing environment, is found to outflux CO sub(2) much faster than the other regions. Considering the latitudinally variable relationships of DOC with oxidants, its different transport pathyways in the water column are discussed...

Dissolved Organic Matter Land-Ocean Linkages in the Arctic

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Mann, P. J.; Spencer, R. M.; Hernes, P. J.; Tank, S. E.; Striegl, R.; Dyda, R. Y.; Peterson, B. J.; McClelland, J. W.; Holmes, R. M.

2012-04-01

Rivers draining into the Arctic Ocean exhibit high concentrations of terrigenous dissolved organic carbon (DOC), and recent studies indicate that DOC export is changing due to climatic warming and alteration in permafrost condition. The fate of exported DOC in the Arctic Ocean is important for understanding the regional carbon cycle and remains a point of discussion in the literature. As part of the NSF funded Arctic Great Rivers Observatory (Arctic-GRO) project, samples were collected for DOC, chromophoric and fluorescent dissolved organic matter (CDOM & FDOM) and lignin phenols from the Ob', Yenisey, Lena, Kolyma, Mackenzie and Yukon rivers in 2009 - 2010. DOC and lignin concentrations were elevated during the spring freshet and measurements related to DOC composition indicated an increasing contribution from terrestrial vascular plant sources at this time of year (e.g. lignin carbon-normalized yield, CDOM spectral slope, SUVA254, humic-like fluorescence). CDOM absorption was found to correlate strongly with both DOC (r2=0.83) and lignin concentration (r2=0.92) across the major arctic rivers. Lignin composition was also successfully modeled using FDOM measurements decomposed using PARAFAC analysis. Utilizing these relationships we modeled loads for DOC and lignin export from high-resolution CDOM measurements (daily across the freshet) to derive improved flux estimates, particularly from the dynamic spring discharge maxima period when the majority of DOC and lignin export occurs. The new load estimates for DOC and lignin are higher than previous evaluations, emphasizing that if these are more representative of current arctic riverine export, terrigenous DOC is transiting through the Arctic Ocean at a faster rate than previously thought. It is apparent that higher resolution sampling of arctic rivers is exceptionally valuable with respect to deriving accurate fluxes and we highlight the potential of CDOM in this role for future studies and the applicability of in

Geochemistry and Flux of Terrigenous Dissolved Organic Matter to the Arctic Ocean

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Spencer, R. G.; Mann, P. J.; Hernes, P. J.; Tank, S. E.; Striegl, R. G.; Dyda, R. Y.; Peterson, B. J.; McClelland, J. W.; Holmes, R. M.

2011-12-01

Rivers draining into the Arctic Ocean exhibit high concentrations of terrigenous dissolved organic carbon (DOC) and recent studies indicate that DOC export is changing due to climatic warming and alteration in permafrost condition. The fate of exported DOC in the Arctic Ocean is of key importance for understanding the regional carbon cycle and remains a point of discussion in the literature. As part of the Arctic Great Rivers Observatory (Arctic-GRO) project, samples were collected for DOC, chromophoric dissolved organic matter (CDOM) and lignin phenols from the Ob', Yenisey, Lena, Kolyma, Mackenzie and Yukon rivers in 2009 - 2010. DOC and lignin concentrations were elevated during the spring freshet and measurements related to DOC composition indicated an increasing contribution from terrestrial vascular plant sources at this time of year (e.g. lignin carbon-normalized yield, CDOM spectral slope, SUVA254, humic-like fluorescence). CDOM absorption was found to correlate strongly with both DOC (r2=0.83) and lignin concentration (r2=0.92) across the major arctic rivers. Utilizing these relationships we modeled loads for DOC and lignin export from high-resolution CDOM measurements (daily across the freshet) to derive improved flux estimates, particularly from the dynamic spring discharge maxima period when the majority of DOC and lignin export occurs. The new load estimates for DOC and lignin are higher than previous evaluations, emphasizing that if these are more representative of current arctic riverine export, terrigenous DOC is transiting through the Arctic Ocean at a faster rate than previously thought. It is apparent that higher resolution sampling of arctic rivers is exceptionally valuable with respect to deriving accurate fluxes and we highlight the potential of CDOM in this role for future studies and the applicability of in-situ CDOM sensors.

Degradation of natural organic matter by UV/chlorine oxidation: Molecular decomposition, formation of oxidation byproducts and cytotoxicity.

Science.gov (United States)

Wang, Wen-Long; Zhang, Xue; Wu, Qian-Yuan; Du, Ye; Hu, Hong-Ying

2017-11-01

The degradation of natural organic matters (NOMs) by the combination of UV and chlorine (UV/chlorine) was investigated in this study. UV/chlorine oxidation can effectively degrade NOMs, with the degradation of chromophores (∼80%) and fluorophores (76.4-80.8%) being more efficient than that of DOC (15.1-18.6%). This effect was attributed to the chromophores and fluorophores (double bonds, aromatic groups and phenolic groups) being preferentially degraded by UV/chlorine oxidation, particularly reactive groups with high electron donating capacity. Radical species •OH and •Cl were generated during UV/chlorine oxidation, with the contribution of •OH 1.4 times as high as that of •Cl. The degradation kinetics of different molecular weight (MW) fractions suggests that UV/chlorine oxidation degrades high MW fractions into low MW fractions, with the degradation rates of high MW fractions (>3000 Da) 4.5 times of those of medium MW fractions (1000-3000 Da). In comparison with chlorination alone, UV/chlorine oxidation did not increase the formation (30 min) and formation potential (24 h) of trihalomethanes, but instead promoted the formation and formation potential of haloacetic acids and chloral hydrate. Adsorbable organic halogen (AOX) formed from UV/chlorine oxidation of NOM were 0.8 times higher than those formed from chlorination. Cytotoxicity studies indicated that the cytotoxicity of NOM increased after both chlorination and UV/chlorine oxidation, which may be due to the formation of AOX. Copyright © 2017 Elsevier Ltd. All rights reserved.

Toward a quantitative and empirical dissolved organic carbon budget for the Gulf of Maine, a semienclosed shelf sea

Science.gov (United States)

Balch, William; Huntington, Thomas; Aiken, George; Drapeau, David; Bowler, Bruce; Lubelczyk, Laura; Butler, Kenna

2016-02-01

A time series of organic carbon export from Gulf of Maine (GoM) watersheds was compared to a time series of biological, chemical, bio-optical, and hydrographic properties, measured across the GoM between Yarmouth, NS, Canada, and Portland, ME, U.S. Optical proxies were used to quantify the dissolved organic carbon (DOC) and particulate organic carbon in the GoM. The Load Estimator regression model applied to river discharge data demonstrated that riverine DOC export (and its decadal variance) has increased over the last 80 years. Several extraordinarily wet years (2006-2010) resulted in a massive pulse of chromophoric dissolved organic matter (CDOM; proxy for DOC) into the western GoM along with unidentified optically scattering material (DOC in the GoM and Scotian Shelf showed the strong influence of the Gulf of Saint Lawrence on the DOC that enters the GoM. A deep plume of CDOM-rich water was observed near the coast of Maine which decreased in concentration eastward. The Forel-Ule color scale was derived and compared to the same measurements made in 1912-1913 by Henry Bigelow. Results show that the GoM has yellowed in the last century, particularly in the region of the extension of the Eastern Maine Coastal Current. Time lags between DOC discharge and its appearance in the GoM increased with distance from the river mouths. Algae were also a significant source of DOC but not CDOM. Gulf-wide algal primary production has decreased. Increases in precipitation and DOC discharge to the GoM are predicted over the next century.

Occurrence and simulation of trihalomethanes in swimming pool water: A simple prediction method based on DOC and mass balance.

Science.gov (United States)

Peng, Di; Saravia, Florencia; Abbt-Braun, Gudrun; Horn, Harald

2016-01-01

Trihalomethanes (THM) are the most typical disinfection by-products (DBPs) found in public swimming pool water. DBPs are produced when organic and inorganic matter in water reacts with chemical disinfectants. The irregular contribution of substances from pool visitors and long contact time with disinfectant make the forecast of THM in pool water a challenge. In this work occurrence of THM in a public indoor swimming pool was investigated and correlated with the dissolved organic carbon (DOC). Daily sampling of pool water for 26 days showed a positive correlation between DOC and THM with a time delay of about two days, while THM and DOC didn't directly correlate with the number of visitors. Based on the results and mass-balance in the pool water, a simple simulation model for estimating THM concentration in indoor swimming pool water was proposed. Formation of THM from DOC, volatilization into air and elimination by pool water treatment were included in the simulation. Formation ratio of THM gained from laboratory analysis using native pool water and information from field study in an indoor swimming pool reduced the uncertainty of the simulation. The simulation was validated by measurements in the swimming pool for 50 days. The simulated results were in good compliance with measured results. This work provides a useful and simple method for predicting THM concentration and its accumulation trend for long term in indoor swimming pool water. Copyright © 2015 Elsevier Ltd. All rights reserved.

In Situ Stoichiometry in a Large River: Continuous Measurement of Doc, NO3 and PO4 in the Sacramento River

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Downing, B. D.; Pellerin, B. A.; Bergamaschi, B. A.; Saraceno, J.

2011-12-01

Studying controls on geochemical processes in rivers and streams is difficult because concentration and composition often changes rapidly in response to physical and biological forcings. Understanding biogeochemical dynamics in rivers will improve current understanding of the role of watershed sources to carbon cycling, river and stream ecology, and loads to estuaries and oceans. Continuous measurements of dissolved organic carbon (DOC), nitrate (NO3-) and soluble reactive phosphate (SRP) concentrations are now possible, along with some information about DOC composition. In situ sensors designed to measure these constituents provide high frequency, real-time data that can elucidate hydrologic and biogeochemical controls which are difficult to detect using more traditional sampling approaches. Here we present a coupled approach, using in situ optical instrumentation with discharge measurements to provide quantitative estimates of constituent loads to investigate C, NO3- and SRP sources and processing in the Sacramento River, CA, USA. Continuous measurement of DOC concentration was conducted by use of a miniature in situ fluorometer (Turner Designs Cyclops) designed to measure chromophoric dissolved organic matter fluorescence (FDOM) over the course of an entire year. Nitrate was measured concurrently using a Satlantic SUNA and phosphate was measured using a WETLabs model Cycle-P instrument for a two week period in July 2011. Continuous measurement from these instruments paired with continuous measurement of physical water quality variables such as temperature, pH, specific conductance, dissolved oxygen, and turbidity, were used to investigate physical and chemical dynamics of DOC, NO3-, SRP over varying time scales. Deploying these instruments at pre-existing USGS discharge gages allowed for calculation of instantaneous and integrated constituent fluxes, as well as filling in gaps in our understanding biogeochemical processes and transport. Results from the study

A Mixed Methods Analysis of the Effect of Google Docs Environment on EFL Learners' Writing Performance and Causal Attributions for Success and Failure

Science.gov (United States)

Seyyedrezaie, Zari Sadat; Ghonsooly, Behzad; Shahriari, Hesamoddin; Fatemi, Hazar Hosseini

2016-01-01

This study investigated the effect of writing process in Google Docs environment on Iranian EFL learners' writing performance. It also examined students' perceptions towards the effects of Google Docs and their perceived causes of success or failure in writing performance. In this regard, 48 EFL students were chosen based on their IELTs writing…

Google Docs: an experience in collaborative work in the University

Directory of Open Access Journals (Sweden)

Vanesa DELGADO BENITO

2013-01-01

Full Text Available The educational environment contains multiple reasons to make use of the new possibilities that Information and Communication Technologies (ICT as an educational resource offer. The educational experience presented here has been realized in the subject of New Technologies applied to Education, which forms part of the study plans for primary school teachers in the University of Burgos (UBU, and which has as its main goal to facilitate the acquisition of generic competences of ICT to work online. To reach this proposed goal, we have cultivated active learning of the students, from individual to collective learning. At first, they were given a text to work individually, to read and review. After that, groups were created to work on the document cooperatively, online, through the use of the office tool Google Docs. After sharing and editing the document, every group made a multimedia presentation in which all of their contributions are bundled. Finally, all of the presentations made by every one of the groups were made public. When the practical part of the course was done, the students answered a short questionnaire in which they were asked about their initial knowledge, and the level of dominion and didactic usefulness of the tool Google Docs. It is worth noting that 75% of the class did not know the application before the course and that, after using it, 92% say they would use it in the educational and professional future. This educational experience has been very satisfactory for students and professors alike.

Diazo dye Congo Red degradation using a Boron-doped diamond anode: An experimental study on the effect of supporting electrolytes.

Science.gov (United States)

Jalife-Jacobo, H; Feria-Reyes, R; Serrano-Torres, O; Gutiérrez-Granados, S; Peralta-Hernández, Juan M

2016-12-05

Diazo dye Congo Red (CR) solutions at 100mg/L, were degraded using different supporting electrolytes in an electrochemical advanced oxidation process (EAOPs), like the anodic oxidation (AOx/BDD). All experiments were carried out in a 3L flow reactor with a Boron-doped diamond (BDD) anode and stainless steel cathode (AISI 304), at 7.5, 15, 30 and 50mA/cm(2) current densities (j). Furthermore, each experiment was carried out under a flow rate of 7L/min. Additionally, HClO4, NaCl, Na2SO4, and H2SO4 were tested as supporting electrolytes at a 50mM concentration. The degradation process was at all times considerably faster in NaCl medium. Solutions containing SO4(2-) or ClO4(-) ions were less prompted to degradation due to the low oxidation power of these species into the bulk. Dissolved organic carbon (DOC) analysis, was carried out to evaluate the mineralization of CR. The degradation of CR, was evaluated with the HPLC analysis of the treated solutions. Copyright © 2016 Elsevier B.V. All rights reserved.

Application of a UV-Vis submersible probe for capturing changes in DOC concentrations across a mire complex during the snowmelt and summer periods

Science.gov (United States)

Avagyan, Armine; Runkle, Benjamin; Kutzbach, Lars

2013-04-01

An accurate quantification of dissolved organic carbon (DOC) is crucial for understanding changes in water resources under the influence of climate, land use and urbanization. However, the conventionally used methods do not allow high frequency in situ analyses in remote or hostile environments (e.g., industrial wastewater or during environmental high-flow events, such as snowmelt or floods). In particular, missing measurements during the snowmelt period in landscapes of the boreal region can lead to significant miscalculations in regional carbon budgets. Therefore, the aim of the study was to test the performance of a portable, submersible UV-Vis spectrophotometer (spectro::lyser, s::can Messtechnik GmbH, Austria) during the snowmelt period in a boreal mire-forest catchment, and to provide a conceptual understanding of the spatial and temporal dynamics of DOC concentrations during and after snowmelt. During 2011, water samples were collected from the near-pristine Ust-Pojeg mire complex in northwestern Russia (61° 56'N, 50° 13'E). Sampling started during the spring snowmelt period and continued until late fall. The mire presented a mosaic of different landscape units. The mire consisted of minerogeous (fen), ombrogenous (bog), and transitional forest-mire (lagg) zones. Water samples were taken from the surface across the mire (22 points at 50-m intervals). DOC concentrations were analyzed directly at the study site using a portable, submersible UV-Vis spectrophotometer, which uses high-resolution absorbance measurements over the wavelength range 200-742.5 nm at 2.5-nm intervals as a proxy for DOC content. Because the DOC composition of fluids varies by site, a local calibration replaced the default settings of the spectro::lyser (Global Calibration) to enhance the accuracy of the measurements. To evaluate the local calibration and correct for drift, the same samples (n = 157) were additionally analyzed using the wet persulfate oxidation method (O

eDOC: A collaboration infrastructure to manage knowledge and information on nuclear projects and research activities

International Nuclear Information System (INIS)

Van Craeynest, J.M.; Jacquemet, F.; Chermette, D.; Bonneau, S.

2004-01-01

After a brief recall of Knowledge Management issues and of the MKSM knowledge modelling method developed and used by the CEA, this paper focuses on the eDOC web collaboration platform designed to support a large range of cross-collaboration needs and a large spectrum of community types (from small units to large European Networks of Excellence). Online community members have different needs : knowing other members and their roles, accessing to reference information and documents, reviewing, annotating and publishing documents or sending information to all or part of members, being informed of events, scheduling shared jobs and manage tasks, discuss some questions using forums, etc. They also want to develop a common identity and portal look and structure customizations are very useful for that purpose. The Information System Department of the CEA has launched the eDOC project to supply a rapid demand growth for those tools. In the CEA, this demand is due to the growing importance and number of internal and external cross-collaborations and alliances with industrial and research partners. After a systematic evaluation campaign of both proprietary and open-source solutions, and after having defined the most pragmatic deployment strategy, we have chosen the Collaborative Portal Server (CPS) edited by Nuxeo. CPS is based on the Zope open-source object-oriented application server. Then we invested to improve functionalities and performances of CPS but also to design and implement a security policy adapted to different types of security requirements and information privacy levels. The eDOC web collaboration infrastructure is now used by 50 projects and this number keeps increasing. The main uses are internal documents repositories (to simplify classical 'Intranet' building and maintaining process) and information repositories (including documents but also events, news, calendar, conferences, etc.) for external collaborations. The 6th European research framework program

eLearning to enhance physician patient communication: a pilot test of "doc.com" and "WebEncounter" in teaching bad news delivery.

Science.gov (United States)

Daetwyler, Christof J; Cohen, Diane G; Gracely, Edward; Novack, Dennis H

2010-01-01

Physician-patient communication skills help determine the nature and quality of diagnostic information elicited from patients, the quality of the physician's counseling, and the patient's adherence to treatment. In spite of their importance, surveys have demonstrated a wide variability and deficiencies in the teaching of these skills. Describe two specific methodologies for teaching physician-patient communication skills developed at our institution and pilot test them for effectiveness. Between 2004 and 2009 we developed "doc.com," a series of 41 media-rich online modules on all aspects of healthcare communication jointly with the American Academy on Communication in Healthcare. Starting in 2006, we expanded our pre-existing experience with the videoconferencing system "WebOSCE" into the online application "WebEncounter." This new methodology combines practice of communication skills on standardized patients with structured assessment and constructive feedback. We had three randomized groups: controls who did only the assessment parts of a WebOSCE on two occasions, a doc.com group who had doc.com in between the assessment occasions, and a combined group that had both doc.com and a WebEncounter between assessments. We found significant improvement in skills as components were added, and the training program was well received.

Spatial distribution and mobility of organic carbon (POC and DOC) in a coastal Mediterranean environment (Saronikos Gulf, Greece) during 2007-2009 period.

Science.gov (United States)

Evangeliou, Nikolaos; Florou, Heleny

2013-08-01

Particulate (POC) and dissolved organic carbon (DOC) is an important parameter for the pollution assessment of coastal marine systems, especially those affected by anthropogenic, domestic, and industrial activities. In the present paper, a similar marine system (Saronikos Gulf) located in the west-central Aegean Sea (eastern Mediterranean Sea) was examined, in terms of the temporal and spatial distribution of organic carbon (POC and DOC), with respect to marine sources and pathways. POC was maximum in winter in the Saronikos Gulf, due to the bloom of phytoplankton, whereas in the Elefsis Bay (located in the north side of the Saronikos Gulf) in summer, since phytoplankton grazes in the Bay in the end of summer (except for winter). Approximately 60 % of the bulk DOC of the water column was estimated as non-refractory (labile and semi-labile), due to the major anthropogenic, domestic, and industrial effects of the region and the shallow depths. The spatial distribution of POC and DOC mainly affects the northeastern section of the Gulf, since that region has been accepted major organic discharges for a long time period, in connection to the relatively long renewal times of its waters.

Long-term genetic monitoring of a riverine dragonfly, Orthetrum coerulescens (Odonata: Libellulidae]: Direct anthropogenic impact versus climate change effects.

Science.gov (United States)

Herzog, Rebecca; Hadrys, Heike

2017-01-01

Modern conservationists call for long term genetic monitoring datasets to evaluate and understand the impact of human activities on natural ecosystems and species on a global but also local scale. However, long-term monitoring datasets are still rare but in high demand to correctly identify, evaluate and respond to environmental changes. In the presented study, a population of the riverine dragonfly, Orthetrum coerulescens (Odonata: Libellulidae), was monitored over a time period from 1989 to 2013. Study site was an artificial irrigation ditch in one of the last European stone steppes and "nature heritage", the Crau in Southern France. This artificial riverine habitat has an unusual high diversity of odonate species, prominent indicators for evaluating freshwater habitats. A clearing of the canal and destruction of the bank vegetation in 1996 was assumed to have great negative impact on the odonate larval and adult populations. Two mitochondrial markers (CO1 & ND1) and a panel of nuclear microsatellite loci were used to assess the genetic diversity. Over time they revealed a dramatic decline in diversity parameters between the years 2004 and 2007, however not between 1996 and 1997. From 2007 onwards the population shows a stabilizing trend but has not reached the amount of genetic variation found at the beginning of this survey. This decline cannot be referred to the clearing of the canal or any other direct anthropogenic impact. Instead, it is most likely that the populations' decay was due to by extreme weather conditions during the specific years. A severe drought was recorded for the summer months of these years, leading to reduced water levels in the canal causing also other water parameters to change, and therefore impacting temperature sensitive riverine habitat specialists like the O. coerulescens in a significant way. The data provide important insights into population genetic dynamics and metrics not always congruent with traditional monitoring data (e

Biodegradability of terrigenous dissolved organic matter in estuaries draining glacial and wetland-dominated watersheds

Science.gov (United States)

Fellman, J. B.; Hood, E.; Spencer, R. G.; Edwards, R. T.; D'Amore, D. V.; Hernes, P. J.

2008-12-01

The processing of terrigenous dissolved organic matter (DOM) by estuarine food webs mediates its transfer from riverine to near-shore coastal environments. We used PARAFAC modeling of fluorescence excitation- emission matrices (EEMs) and biodegradable dissolved organic carbon (BDOC) incubations to investigate changes in the chemical quality and biodegradability of terrigenous DOM along a salinity gradient in three estuaries in coastal southeastern Alaska: 1) a watershed with high glacial coverage, 2) a forested watershed with low glacial coverage and 3) a watershed with high wetland coverage. Biodegradable DOC incubations were conducted for each site by inoculating filtered river water with whole water collected from four different salinities (0, 2, 10 and 25 ppt) and incubating the water samples for 2, 7, 14 and 28 days. The percent BDOC ranged from 33-54% for the 28-day incubations at the three sites and greater than half of the total BDOC was consumed during the first 2 days of the incubations. The percent BDOC was also greater in the estuary draining the highly glaciated watershed for all four salinities. Moreover, percent BDOC increased with increasing salinity in all three estuaries, suggesting greater bacterial utilization of terrigenous DOC under estuarine as compared to riverine conditions. There are several potential explanations for the observed patterns in BDOC: 1) there is a shift in bacterial community composition along the salinity gradient we sampled and 2) marine bacteria contain a more diverse set of hydrolytic isoenzymes than riverine bacteria, allowing them to more effectively metabolize terrigenous DOM. Application of a conservative mixing model combined with PARAFAC modeling of fluorescence EEMs showed that fluorescent DOM behaved conservatively in all three estuaries, as indicated by the near-linear decrease in the contribution of humic-like fluorescence with increasing salinity. PARAFAC modeling further showed that the relative contribution

Comparison of single-step and two-step purified coagulants from Moringa oleifera seed for turbidity and DOC removal.

Science.gov (United States)

Sánchez-Martín, J; Ghebremichael, K; Beltrán-Heredia, J

2010-08-01

The coagulant proteins from Moringa oleifera purified with single-step and two-step ion-exchange processes were used for the coagulation of surface water from Meuse river in The Netherlands. The performances of the two purified coagulants and the crude extract were assessed in terms of turbidity and DOC removal. The results indicated that the optimum dosage of the single-step purified coagulant was more than two times higher compared to the two-step purified coagulant in terms of turbidity removal. And the residual DOC in the two-step purified coagulant was lower than in single-step purified coagulant or crude extract. (c) 2010 Elsevier Ltd. All rights reserved.

Century-long increasing trend and variability of dissolved organic carbon export from the Mississippi River basin driven by natural and anthropogenic forcing

Science.gov (United States)

Ren, Wei; Tian, Hanqin; Cai, Wei-Jun; Lohrenz, Steven E.; Hopkinson, Charles S.; Huang, Wei-Jen; Yang, Jia; Tao, Bo; Pan, Shufen; He, Ruoying

2016-09-01

There has been considerable debate as to how natural forcing and anthropogenic activities alter the timing and magnitude of the delivery of dissolved organic carbon (DOC) to the coastal ocean, which has ramifications for the ocean carbon budget, land-ocean interactions, and coastal life. Here we present an analysis of DOC export from the Mississippi River to the Gulf of Mexico during 1901-2010 as influenced by changes in climate, land use and management practices, atmospheric CO2, and nitrogen deposition, through the integration of observational data with a coupled hydrologic/biogeochemical land model. Model simulations show that DOC export in the 2000s increased more than 40% since the 1900s. For the recent three decades (1981-2010), however, our simulated DOC export did not show a significant increasing trend, which is consistent with observations by U.S. Geological Survey. Our factorial analyses suggest that land use and land cover change, including land management practices (LMPs: i.e., fertilization, irrigation, tillage, etc.), were the dominant contributors to the century-scale trend of rising total riverine DOC export, followed by changes in atmospheric CO2, nitrogen deposition, and climate. Decadal and interannual variations of DOC export were largely attributed to year-to-year climatic variability and extreme flooding events, which have been exacerbated by human activity. LMPs show incremental contributions to DOC increase since the 1960s, indicating the importance of sustainable agricultural practices in coping with future environmental changes such as extreme flooding events. Compared to the observational-based estimate, the modeled DOC export was 20% higher, while DOC concentrations were slightly lower. Further refinements in model structure and input data sets should enable reductions in uncertainties in our prediction of century-long trends in DOC.

Controls on dissolved organic matter (DOM) degradation in a headwater stream: the influence of photochemical and hydrological conditions in determining light-limitation or substrate-limitation of photo-degradation

Science.gov (United States)

Cory, R. M.; Harrold, K. H.; Neilson, B. T.; Kling, G. W.

2015-11-01

We investigated how absorption of sunlight by chromophoric dissolved organic matter (CDOM) controls the degradation and export of DOM from Imnavait Creek, a beaded stream in the Alaskan Arctic. We measured concentrations of dissolved organic carbon (DOC), as well as concentrations and characteristics of CDOM and fluorescent dissolved organic matter (FDOM), during ice-free periods of 2011-2012 in the pools of Imnavait Creek and in soil waters draining to the creek. Spatial and temporal patterns in CDOM and FDOM in Imnavait Creek were analyzed in conjunction with measures of DOM degradation by sunlight and bacteria and assessments of hydrologic residence times and in situ UV exposure. CDOM was the dominant light attenuating constituent in the UV and visible portion of the solar spectrum, with high attenuation coefficients ranging from 86 ± 12 m-1 at 305 nm to 3 ± 1 m-1 in the photosynthetically active region (PAR). High rates of light absorption and thus light attenuation by CDOM contributed to thermal stratification in the majority of pools in Imnavait Creek under low-flow conditions. In turn, thermal stratification increased the residence time of water and DOM, and resulted in a separation of water masses distinguished by contrasting UV exposure (i.e., UV attenuation by CDOM with depth resulted in bottom waters receiving less UV than surface waters). When the pools in Imnavait Creek were stratified, DOM in the pool bottom water closely resembled soil water DOM in character, while the concentration and character of DOM in surface water was reproduced by experimental photo-degradation of bottom water. These results, in combination with water column rates of DOM degradation by sunlight and bacteria, suggest that photo-degradation is the dominant process controlling DOM fate and export in Imnavait Creek. A conceptual model is presented showing how CDOM amount and lability interact with incident UV light and water residence time to determine whether photo-degradation

Enseñanza individual a través de Skype y Google Docs

Directory of Open Access Journals (Sweden)

Agata Łazor

2013-07-01

Full Text Available El artículo presenta ideas para clases on-line utilizando Google Docs ySkype. En la parte teórica se explica el concepto de enseñanza virtual asincrónica ysincrónica. Se comentan las ventajas e inconvenientes de ambos modos de enseñanza.Los ejercicios prácticos utilizan sobre todo los métodos y herramientas sincrónicos ytienen el propósito de utilizar varias aplicaciones de Google Docs. Todas las tareas seadaptan a diferentes estilos de aprendizaje. La primera está relacionada con recordar yrepetir colocaciones y expresiones. En el segundo ejercicio se utiliza una fotografía y sela etiqueta aprovechando la opción dada por Google Drawing. En la tercera tarea seaplican tanto las estrategias de e-learning sincrónico como asincrónico y consiste en lacorrección on-line de una tarea previamente escrita. La última tarea implica la búsquedaen internet de una página web y la simulación de un intercambio de e-mails con elpropietario de un piso.

Enseñanza individual a través de Skype y Google Docs

Directory of Open Access Journals (Sweden)

Agata Łazor

2013-01-01

Full Text Available El artículo presenta ideas para clases on-line utilizando Google Docs y Skype. En la parte teórica se explica el concepto de enseñanza virtual asincrónica y sincrónica. Se comentan las ventajas e inconvenientes de ambos modos de enseñanza.Los ejercicios prácticos utilizan sobre todo los métodos y herramientas sincrónicos y tienen el propósito de utilizar varias aplicaciones de Google Docs. Todas las tareas se adaptan a diferentes estilos de aprendizaje. La primera está relacionada con recordar y repetir colocaciones y expresiones. En el segundo ejercicio se utiliza una fotografía y se la etiqueta aprovechando la opción dada por Google Drawing. En la tercera tarea se aplican tanto las estrategias de e-learning sincrónico como asincrónico y consiste en la corrección on-line de una tarea previamente escrita. La última tarea implica la búsqueda en internet de una página web y la simulación de un intercambio de e-mails con el propietario de un piso.

Studies on radioactivity and risk assessment in the riverine environs of Cauvery

International Nuclear Information System (INIS)

Kaliprasad, C.S.; Narayana, Y.

2016-01-01

Aquatic environment is important to transfer all contaminants to the geographic area through water and sediments. When compared to all other aquatic environments, the riverine environs are vital for study of the natural radionuclides concentration. River sediments are used as construction materials and water used in agriculture, industries and house hold purposes. River sediments contains the natural radionuclides accumulated from the soil due to erosion, weathering of rocks and river bed itself. Monitoring the release of radiation from gamma sources is important to assess the radiation dose received by the human population. The natural radionuclide mainly arises from radioactive series 238 U and 232 Th and singly occurring radionuclide 40 K. The external gamma radiation exposure to the population changes due to the geology and geographical condition of the area and its associated radioactivity level in the soil

The physiological response of two green calcifying algae from the Great Barrier Reef towards high dissolved inorganic and organic carbon (DIC and DOC availability.

Directory of Open Access Journals (Sweden)

Friedrich Wilhelm Meyer

Full Text Available Increasing dissolved inorganic carbon (DIC concentrations associated with ocean acidification can affect marine calcifiers, but local factors, such as high dissolved organic carbon (DOC concentrations through sewage and algal blooms, may interact with this global factor. For calcifying green algae of the genus Halimeda, a key tropical carbonate producer that often occurs in coral reefs, no studies on these interactions have been reported. These data are however urgently needed to understand future carbonate production. Thus, we investigated the independent and combined effects of DIC (pCO2 402 μatm/ pHtot 8.0 and 996 μatm/ pHtot 7.7 and DOC (added as glucose in 0 and 294 μmol L-1 on growth, calcification and photosynthesis of H. macroloba and H. opuntia from the Great Barrier Reef in an incubation experiment over 16 days. High DIC concentrations significantly reduced dark calcification of H. opuntia by 130 % and led to net dissolution, but did not affect H. macroloba. High DOC concentrations significantly reduced daily oxygen production of H. opuntia and H. macroloba by 78 % and 43 %, respectively, and significantly reduced dark calcification of H. opuntia by 70%. Combined high DIC and DOC did not show any interactive effects for both algae, but revealed additive effects for H. opuntia where the combination of both factors reduced dark calcification by 162 % compared to controls. Such species-specific differences in treatment responses indicate H. opuntia is more susceptible to a combination of high DIC and DOC than H. macroloba. From an ecological perspective, results further suggest a reduction of primary production for Halimeda-dominated benthic reef communities under high DOC concentrations and additional decreases of carbonate accretion under elevated DIC concentrations, where H. opuntia dominates the benthic community. This may reduce biogenic carbonate sedimentation rates and hence the buffering capacity against further ocean

The physiological response of two green calcifying algae from the Great Barrier Reef towards high dissolved inorganic and organic carbon (DIC and DOC) availability.

Science.gov (United States)

Meyer, Friedrich Wilhelm; Vogel, Nikolas; Teichberg, Mirta; Uthicke, Sven; Wild, Christian

2015-01-01

Increasing dissolved inorganic carbon (DIC) concentrations associated with ocean acidification can affect marine calcifiers, but local factors, such as high dissolved organic carbon (DOC) concentrations through sewage and algal blooms, may interact with this global factor. For calcifying green algae of the genus Halimeda, a key tropical carbonate producer that often occurs in coral reefs, no studies on these interactions have been reported. These data are however urgently needed to understand future carbonate production. Thus, we investigated the independent and combined effects of DIC (pCO2 402 μatm/ pHtot 8.0 and 996 μatm/ pHtot 7.7) and DOC (added as glucose in 0 and 294 μmol L-1) on growth, calcification and photosynthesis of H. macroloba and H. opuntia from the Great Barrier Reef in an incubation experiment over 16 days. High DIC concentrations significantly reduced dark calcification of H. opuntia by 130 % and led to net dissolution, but did not affect H. macroloba. High DOC concentrations significantly reduced daily oxygen production of H. opuntia and H. macroloba by 78 % and 43 %, respectively, and significantly reduced dark calcification of H. opuntia by 70%. Combined high DIC and DOC did not show any interactive effects for both algae, but revealed additive effects for H. opuntia where the combination of both factors reduced dark calcification by 162 % compared to controls. Such species-specific differences in treatment responses indicate H. opuntia is more susceptible to a combination of high DIC and DOC than H. macroloba. From an ecological perspective, results further suggest a reduction of primary production for Halimeda-dominated benthic reef communities under high DOC concentrations and additional decreases of carbonate accretion under elevated DIC concentrations, where H. opuntia dominates the benthic community. This may reduce biogenic carbonate sedimentation rates and hence the buffering capacity against further ocean acidification.

Examining the interrelationship between DOC, bromide and chlorine dose on DBP formation in drinking water--a case study.

Science.gov (United States)

Bond, Tom; Huang, Jin; Graham, Nigel J D; Templeton, Michael R

2014-02-01

During drinking water treatment aqueous chlorine and bromine compete to react with natural organic matter (NOM). Among the products of these reactions are potentially harmful halogenated disinfection by-products, notably four trihalomethanes (THM4) and nine haloacetic acids (HAAs). Previous research has concentrated on the role of bromide in chlorination reactions under conditions of a given NOM type and/or concentration. In this study different concentrations of dissolved organic carbon (DOC) from U.K. lowland water were reacted with varying amounts of bromide and chlorine in order to examine the interrelationship between the three reactants in the formation of THM4, dihaloacetic acids (DHAAs) and trihaloacetic acids (THAAs). Results showed that, in general, molar yields of THM4 increased with DOC, bromide and chlorine concentrations, although yields did fluctuate versus chlorine dose. In contrast both DHAA and THAA yields were mainly independent of changes in bromide and chlorine dose at low DOC (1 mg·L(-1)), but increased with chlorine dose at higher DOC concentrations (4 mg·L(-1)). Bromine substitution factors reached maxima of 0.80, 0.67 and 0.65 for the THM4, DHAAs and THAAs, respectively, at the highest bromide/chlorine ratio studied. These results suggest that THM4 formation kinetics depend on both oxidation and halogenation steps, whereas for DHAAs and THAAs oxidation steps are more important. Furthermore, they indicate that high bromide waters may prove more problematic for water utilities with respect to THM4 formation than for THAAs or DHAAs. While mass concentrations of all three groups increased in response to increased bromide incorporation, only the THMs also showed an increase in molar yield. Overall, the formation behaviour of DHAA and THAA was more similar than that of THM4 and THAA. © 2013.

Temporal and spatial variation in Hg accumulation in zebra mussels (Dreissena polymorpha): possible influences of DOC and diet.

Science.gov (United States)

Kraemer, Lisa D; Evans, Douglas; Dillon, Peter J

2013-05-01

Zebra mussels (Dreissena polymorpha) are filter feeders located near the base of the foodweb and these animals are able to utilize a variety of carbon sources that may also vary seasonally. We conducted both a spatial and a temporal study in order to test the hypotheses: (1) dissolved organic carbon (DOC) concentrations influence Hg accumulation in zebra mussels sampled from a series of lakes and (2) seasonal variations in diet influence Hg accumulation. In the spatial study, we found a significant negative relationship between Hg concentrations and DOC concentrations, suggesting an influence of DOC on Hg bioaccumulation. In the temporal study, we used stable isotope ratios of nitrogen (δ(15)N) and carbon (δ(13)C) as ecological tools to provide a temporally integrated description of the feeding ecology of zebra mussels. Both δ(15)N and δ(13)C varied seasonally in a similar manner: more depleted values occurred in the summer and more enriched values occurred in the fall. Mercury concentrations also varied significantly over the year, with highest concentrations occurring in the summer, followed by a progressive decrease in concentrations into the fall. The C/N ratio of zebra mussels also varied significantly over the year with the lowest values occurring mid-summer and then values increased in the fall and winter, suggesting that there was significant variation in lipid stores. These results indicate that in addition to any effect of seasonal dietary changes, seasonal variation in energy stores also appeared to be related to Hg levels in the zebra mussels. Collectively results from this study suggest that DOC concentrations, seasonal variation in diet and seasonal depletion of energy stores are all important variables to consider when understanding Hg accumulation in zebra mussels. Copyright © 2013 Elsevier Inc. All rights reserved.

Functional diversity measures revealed impacts of non-native species and habitat degradation on species-poor freshwater fish assemblages.

Science.gov (United States)

Colin, Nicole; Villéger, Sébastien; Wilkes, Martin; de Sostoa, Adolfo; Maceda-Veiga, Alberto

2018-06-01

Trait-based ecology has been developed for decades to infer ecosystem responses to stressors based on the functional structure of communities, yet its value in species-poor systems is largely unknown. Here, we used an extensive dataset in a Spanish region highly prone to non-native fish invasions (15 catchments, N=389 sites) to assess for the first time how species-poor communities respond to large-scale environmental gradients using a taxonomic and functional trait-based approach in riverine fish. We examined total species richness and three functional trait-based indices available when many sites have ≤3 species (specialization, FSpe; originality, FOri and entropy, FEnt). We assessed the responses of these taxonomic and functional indices along gradients of altitude, water pollution, physical habitat degradation and non-native fish biomass. Whilst species richness was relatively sensitive to spatial effects, functional diversity indices were responsive across natural and anthropogenic gradients. All four diversity measures declined with altitude but this decline was modulated by physical habitat degradation (richness, FSpe and FEnt) and the non-native:total fish biomass ratio (FSpe and FOri) in ways that varied between indices. Furthermore, FSpe and FOri were significantly correlated with Total Nitrogen. Non-native fish were a major component of the taxonomic and functional structure of fish communities, raising concerns about potential misdiagnosis between invaded and environmentally-degraded river reaches. Such misdiagnosis was evident in a regional fish index widely used in official monitoring programs. We recommend the application of FSpe and FOri to extensive datasets from monitoring programs in order to generate valuable cross-system information about the impacts of non-native species and habitat degradation, even in species-poor systems. Scoring non-native species apart from habitat degradation in the indices used to determine ecosystem health is

Consumption and release of dissolved organic carbon by marine bacteria in a pulsed-substrate environment: from experiments to modelling.

NARCIS (Netherlands)

Eichinger, M.; Kooijman, S.A.L.M.; Sempere, R.; Poggiale, J.C.

2009-01-01

To investigate the effects of episodic occurrence of dissolved organic carbon(DOC) in the natural environment, bacterial degradation of labile DOC was studied under laboratory-controlled conditions followed by modelling. A single labile DOC compound was periodically added to the experimental culture

Utilizing chromophoric dissolved organic matter measurements to derive export and reactivity of dissolved organic carbon exported to the Arctic Ocean: A case study of the Yukon River, Alaska

Science.gov (United States)

Spencer, R.G.M.; Aiken, G.R.; Butler, K.D.; Dornblaser, M.M.; Striegl, Robert G.; Hernes, P.J.

2009-01-01

The quality and quantity of dissolved organic matter (DOM) exported by Arctic rivers is known to vary with hydrology and this exported material plays a fundamental role in the biogeochemical cycling of carbon at high latitudes. We highlight the potential of optical measurements to examine DOM quality across the hydrograph in Arctic rivers. Furthermore, we establish chromophoric DOM (CDOM) relationships to dissolved organic carbon (DOC) and lignin phenols in the Yukon River and model DOC and lignin loads from CDOM measurements, the former in excellent agreement with long-term DOC monitoring data. Intensive sampling across the historically under-sampled spring flush period highlights the importance of this time for total export of DOC and particularly lignin. Calculated riverine DOC loads to the Arctic Ocean show an increase from previous estimates, especially when new higher discharge data are incorporated. Increased DOC loads indicate decreased residence times for terrigenous DOM in the Arctic Ocean with important implications for the reactivity and export of this material to the Atlantic Ocean. Citation: Spencer, R. G. M., G. R. Aiken, K. D. Butler, M. M. Dornblaser, R. G. Striegl, and P. J. Hernes (2009), Utilizing chromophoric dissolved organic matter measurements to derive export and reactivity of dissolved organic carbon exported to the Arctic Ocean: A case study of the Yukon River, Alaska, Geophys. Res. Lett., 36, L06401, doi:10.1029/ 2008GL036831. Copyright 2009 by the American Geophysical Union.

Effect of dairy manure rate and the stabilization time of amended soils on atrazine degradation.

Science.gov (United States)

Aguilera, Paula; Briceño, Gabriela; Candia, Maribel; Mora, Maria de la Luz; Demanet, Rolando; Palma, Graciela

2009-10-01

The application rate of liquid cow manure (LCM) in the field and the stabilization time of amended soils before application of pre-plant herbicides are factors that determine their efficiency. This study includes evaluation of residual atrazine (2-chloro-4-ethylamino-6-isopropylamino-1,3,5-triazine) in soil and amended soils with equivalent rate of 100,000; 200,000; and 300,000 L ha(-1) of LCM and the effect of pre-incubation time of amended soils on atrazine degradation. The study was carried out under controlled conditions using an Andisol with previous historical application of atrazine. The respiratory activity and fluorescein diacetate (FDA) studies indicated that the time necessary for stabilization of amended soils is over 20-30 d. During the measurement of respiratory and FDA activity, no significant differences were observed when atrazine was applied. The half-life of atrazine ranged from 5 to 8d and the relative distribution of degradation products seem to be affected by the application of LCM. The pre-incubation time of amended soil and LCM dose would not affect atrazine degradation rate, when the soil has a history of herbicide application. However, repeated applications of LCM in a long period of time could change the soil pH and increase the content of dissolved organic carbon (DOC) which could further contribute to a faster degradation of atrazine. Both effects would reduce the effectiveness of atrazine in weed control.

Processing and evaluation of riverine waveforms acquired by an experimental bathymetric LiDAR

Science.gov (United States)

Kinzel, P. J.; Legleiter, C. J.; Nelson, J. M.

2010-12-01

Accurate mapping of fluvial environments with airborne bathymetric LiDAR is challenged not only by environmental characteristics but also the development and application of software routines to post-process the recorded laser waveforms. During a bathymetric LiDAR survey, the transmission of the green-wavelength laser pulses through the water column is influenced by a number of factors including turbidity, the presence of organic material, and the reflectivity of the streambed. For backscattered laser pulses returned from the river bottom and digitized by the LiDAR detector, post-processing software is needed to interpret and identify distinct inflections in the reflected waveform. Relevant features of this energy signal include the air-water interface, volume reflection from the water column itself, and, ideally, a strong return from the bottom. We discuss our efforts to acquire, analyze, and interpret riverine surveys using the USGS Experimental Advanced Airborne Research LiDAR (EAARL) in a variety of fluvial environments. Initial processing of data collected in the Trinity River, California, using the EAARL Airborne Lidar Processing Software (ALPS) highlighted the difficulty of retrieving a distinct bottom signal in deep pools. Examination of laser waveforms from these pools indicated that weak bottom reflections were often neglected by a trailing edge algorithm used by ALPS to process shallow riverine waveforms. For the Trinity waveforms, this algorithm had a tendency to identify earlier inflections as the bottom, resulting in a shallow bias. Similarly, an EAARL survey along the upper Colorado River, Colorado, also revealed the inadequacy of the trailing edge algorithm for detecting weak bottom reflections. We developed an alternative waveform processing routine by exporting digitized laser waveforms from ALPS, computing the local extrema, and fitting Gaussian curves to the convolved backscatter. Our field data indicate that these techniques improved the

The Influences of Riverine Dissolved Organic Matter in the Gulf of Maine

Science.gov (United States)

Aiken, G.; Cao, X.; Mao, J.; Spencer, R. G.; Balch, W. M.; Huntington, T. G.

2014-12-01

Dissolved organic matter (DOM) exported from the Gulf of St. Lawrence and by rivers in Maine, Nova Scotia, and New Brunswick is being studied to quantify and characterize optical proxies in the receiving waters of the Gulf of Maine (GoM). Measurements of DOC concentrations, absorption coefficients (254nm, 350 nm and 412 nm), specific ultraviolet absorbance (SUVA254), spectral slope, and fluorescence, and DOC fractionation and isotopic analyses were used to determine the amount and nature of DOM from major inflowing rivers, marine waters, and the GoM. In addition, lignin phenols, 14C-age, 13C-NMR and FTICR-MS analyses were performed on the hydrophobic (HPOA) and transphilic organic acid fractions of the DOM isolated using XAD resins for a smaller subset of samples from the Penobscot River, Penobscot Bay, GoM waters in the Eastern Maine Coastal Current (EMCC), a sample from the eastern portion of the GoM (Scotian Shelf waters), and the Pacific Ocean. These samples provide detailed DOM compositional data in support of the more easily collected concentration and optical data obtained from discrete samples, optical data obtained by in situ glider, and remotely sensed satellite observations. Optical measurements, 13C-NMR, and lignin phenol analyses showed that DOM associated with inflowing rivers to the GoM is rich in aromatic compounds resulting in a large flux of terrestrially derived chromophoric DOM (CDOM). As a result, GoM DOM is more aromatic and younger than open ocean samples collected from the Sargasso Sea and from the Pacific Ocean near Hawaii. This observation is consistent with isotopic data that indicated δ 13C values for the HPOA fractions from the Gulf samples (δ 13C= -27‰ and -25‰) were considerably depleted in comparison to the whole DOM sample (δ 13C = -19‰; which also includes algal-produced DOM) and are more similar to those from the terrestrial sources. Samples from the EMCC were the most heavily influenced by terrestrial sources. While NMR

Transport and transformation of soil-derived CO2, CH4 and DOC sustain CO2 supersaturation in small boreal streams.

Science.gov (United States)

Rasilo, Terhi; Hutchins, Ryan H S; Ruiz-González, Clara; Del Giorgio, Paul A

2017-02-01

Streams are typically supersaturated in carbon dioxide (CO 2 ) and methane (CH 4 ), and are recognized as important components of regional carbon (C) emissions in northern landscapes. Whereas there is consensus that in most of the systems the CO 2 emitted by streams represents C fixed in the terrestrial ecosystem, the pathways delivering this C to streams are still not well understood. We assessed the contribution of direct soil CO 2 injection versus the oxidation of soil-derived dissolved organic C (DOC) and CH 4 in supporting CO 2 supersaturation in boreal streams in Québec. We measured the concentrations of CO 2 , CH 4 and DOC in 43 streams and adjacent soil waters during summer base-flow period. A mass balance approach revealed that all three pathways are significant, and that the mineralization of soil-derived DOC and CH 4 accounted for most of the estimated stream CO 2 emissions (average 75% and 10%, respectively), and that these estimated contributions did not change significantly between the studied low order (≤3) streams. Whereas some of these transformations take place in the channel proper, our results suggest that they mainly occur in the hyporheic zones of the streams. Our results further show that stream CH 4 emissions can be fully explained by soil CH 4 inputs. This study confirms that these boreal streams, and in particular their hyporheic zones, are extremely active processors of soil derived DOC and CH 4 , not just vents for soil produced CO 2 . Copyright © 2016 Elsevier B.V. All rights reserved.

Los ejes DOC una estrategia conceptual y metodológica en la construcción del Conocimiento Profesional del Profesor

Directory of Open Access Journals (Sweden)

Guillermo Fonseca Amaya

2018-01-01

Full Text Available La didáctica de las ciencias como una disciplina en consolidación, se construye a través de diversas lineas de investigación, entre ellas El conocimiento Profesional del Profesor, que surge en razón de la necesidad de comprender cómo los profesores en formación y en ejercicio construyen un conocimiento singular de su profesión. Los Ejes DOC (Dinamizador, Obstáculo y Cuestionamiento, se constituyen en un dispositivo conceptual y metodológico de orden reflexivo sobre los aspectos que se articulan en la construcción del Conocimiento Profesional del Profesor. Acorde con ello, se presentan los resultados de un proceso de I-A, en donde un profesor en formación, comprende que la evaluación y la estrategia de enseñanza (investigación escolar, se constituyen en Ejes DOC que aportan en su proceso de formación como profesor de biología. Derivado del estudio de caso es posible evidenciar dos características de los Ejes DOC (Dinamizador, Obstáculo y Cuestionamiento la coexistencia temporal de los ejes sobre un conocimiento y la posibilidad de su transformación. Así, se considera que los Ejes DOC, son una propuesta conceptual que no sólo en la investigación en didáctica, sino también en los procesos formativos, realiza aportes tanto en la comprensión como en la transformación y enriquecimiento del conocimiento profesional.

eDOC : A collaboration infrastructure to manage knowledge and information on nuclear projects and research activities

International Nuclear Information System (INIS)

Van Craeynest, J.M.; Jacquemet, F.; Chermette, D.; Bonneau, S.

2004-01-01

One of EU's strategic goals was launched at Lisbon 2000 European summit: becoming the most competitive knowledge economy by 2010. In the field of nuclear technologies, we know that capitalizing knowledge and acquired experience is vital to preserve nuclear equipment's' safe use in the future. Knowledge Management encompasses various domains of business practices, relating to human resources management, information, information technologies, strategy, and accounting. Facing such complex issues, especially in R and D organizations, knowledge management cannot only stand on a few organizational or technical solutions. All functions must be involved to achieve those strategic objectives: management must find realistic incentives and inscribe Knowledge Management as a core management objective (just as Quality Insurance has been). Human Resources departments and education institutes can benefit from new technologies to improve training methods. Research units have to launch knowledge capitalization projects to retrieve, save and transfer critical knowledge, technical skills and know-how. An a-posteriori knowledge saving 'fireman-type' action must be done in the case of major events but we must promote an on-going capitalization effort as well and embed KM into projects and activities management methods. This effort during the project and afterwards is implemented through a perennial information system. This information system should provide a wide range of services for scientific publications and patents management, corporate or local knowledge bases and document repositories, project management and collaboration, rich media authoring, etc. Implementing virtual workspaces with eDOC Research and engineering activities are more and more cross-organizations funded and netlike organized. Furthermore, it is very difficult for project managers to deal with security constraints as they must share but protect knowledge as well. Before sharing information, teams have to share a

Suburban Soils: Are they the answer in determining factors controlling non-point-source DOC and DON in urban surface waters?

Science.gov (United States)

Aitkenhead-Peterson, J. A.

2016-12-01

Generally the quality of urban streams has been attributed to storm water runoff and sewage effluent discharge. Recent work in the upper Trinity Basin downstream from the Dallas/Fort Worth metropolis, TX concluded that sewage effluent only contributed between 1 and 35% of DOC dependent upon the population of the watershed. Change from native to urban land use increased DOC exports to between 938 - 1840 kg km-2 yr-1relative to the 517 kg km-2 yr-1 expected from native land use. Where this excess DOC might come from in an urban ecosystem was addressed in a separate study examining water extractable DOC (WEDOC) and DON (WEDON) in soils of single-family home lawns in Chicago, IL, Frederick, MD, Bryan/College Station, TX and Galveston, TX. These cities were exposed to different sources of sodium. Time of exposure to sodium was considered on the assumption that as new sub-divisions are built, new soil or turfgrass sod is introduced to the site. Exposure times were 0-5, 6-10, 11-20, 21-30 and > 30 yr. Length of exposure time of the soil to the urban environment was significant among the four cities examined for DOC (p < 0.001), DON (p < 0.001), sodium adsorption ratio (p < 0.006) but not for sodium (p = 0.08) or exchangeable sodium percent (ESP) (p = 0.09). In all cities WEDON increased with urban exposure time and in all cities except Galveston WEDOC increased with urban exposure time. Sodium, regardless of its source, explained 60% of the variance in WEDOC and 54% of the variance in WEDON across all cities (n = 136). To determine what other factors might be involved in increasing WEDOC and WEDON losses from suburban soils, backward stepwise regression models were used. Across the four cities, time of urban exposure, soil saturated hydraulic conductivity (Ksat), NO3-N, NH4-N, S, PO4-P, Na, Cu, Ca, Fe and Zn produced a significant model for WEDOC (Adjusted r2 = 0.85; p < 0.001) and Ksat, pH, NH4-N, PO4-P, S, Alkalinity and Cu produced a significant model for WEDON

Solar photoelectro-Fenton flow plant modeling for the degradation of the antibiotic erythromycin in sulfate medium

International Nuclear Information System (INIS)

Pérez, Tzayam; Sirés, Ignasi; Brillas, Enric; Nava, José L.

2017-01-01

Highlights: • Use of a 10 dm 3 solar plant with a FM01-LC cell and a CPC photoreactor. • Predominant H 2 O 2 production at the graphite-felt cathode and photolysis at the CPC. • Close agreement was obtained between theoretical and experimental data. • Four heterocyclic, one aromatic, one tertiary amine and five carboxylic acids detected. • Release of nitrate ions and, to a lesser extent, ammonium ion. - Abstract: A solar photoelectro-Fenton (SPEF) plant containing a filter-press FM01-LC flow reactor in series with a compound parabolic collector (CPC) as photoreactor, operating in batch recirculation mode, was simulated using a parametric model. The degradation of 10 dm 3 of solutions of the heterocyclic antibiotic erythromycin (ERY) in 0.050 mol dm −3 Na 2 SO 4 at pH 3.0 was used for validation. The filter-press reactor contained a platinized titanium plate anode and a graphite-felt cathode that produced H 2 O 2 from the reduction of dissolved oxygen (0.24 mmol dm −3 ). Trials were performed under potentiostatic and galvanostatic conditions with predominance of H 2 O 2 production, minimizing H 2 evolution reaction. The effect of initial catalyst (Fe 2+ ) concentration, current density (j), initial antibiotic concentration as dissolved organic carbon (DOC) and volumetric flow rate on the ERY mineralization was studied. Good agreement between simulations and experimental DOC decays was obtained. Mineralization current efficiencies and specific energy consumptions were also determined. The best performance under galvanostatic conditions was found for 0.225 mmol dm −3 ERY (100 mg dm −3 DOC), 0.50 mmol dm −3 Fe 2+ , volumetric flow rate of 3.0 dm 3 min −1 and j cath = -0.16 mA cm −2 , reaching 69% mineralization with current efficiency of 75% and specific energy consumption of 0.059 kWh (g DOC) −1 . Six organic by-products were identified by gas chromatography-mass spectrometry, whereas final short-chain carboxylic acids like formic and oxalic

The design of PoliDocs: a web information system for the disclosure of Dutch parliamentary publications

NARCIS (Netherlands)

Gielissen, T.; Marx, M.

2009-01-01

The development of PoliDocs.nl, a Web Information System for the disclosure of Dutch parliamentary publications, is an effort to improve the disclosure of parliamentary publications in The Netherlands. The data is distributed over three sources and is available through different Web Information

Medicinal animals: knowledge and use among riverine populations from the Negro River, Amazonas, Brazil

Directory of Open Access Journals (Sweden)

Andréa Leme da Silva

2008-12-01

Full Text Available The article documents the use of animals in the home medicine among riverine populations from the Negro River, State of Amazonas, Brazil. Data were collected through interviews and observations concerning to the knowledge and everyday practices of the use of medicinal animals. About 60 animal species are known with medicinal purposes. The knowledge is well distributed between sexes (men and women and localities (urban and rural. The use of medicinal animals is embedded in etiological concepts and involves a complex cosmological vision of the cure process. The rural exodus and the facilitated access to the western medicine may be promoting the loss of the traditional knowledge, which can be mitigated through the valorization and transmission of this knowledge to the future generations.

Google Docs as a Tool for Collaborative Writing in the Middle School Classroom

OpenAIRE

Yanan Fan; Megan P Woodrich

2017-01-01

Aim/Purpose: In this study, the authors examine how an online word processing tool can be used to encourage participation among students of different language back-grounds, including English Language Learners. To be exact, the paper discusses whether student participation in anonymous collaborative writing via Google Docs can lead to more successful products in a linguistically diverse eighth-grade English Language Arts classroom. Background: English Language Learners (ELLs) make up a con...

Production and degradation of fluorescent dissolved organic matter in surface waters of the eastern north Atlantic ocean

Science.gov (United States)

Lønborg, Christian; Yokokawa, Taichi; Herndl, Gerhard J.; Antón Álvarez-Salgado, Xosé

2015-02-01

The distribution and fate of coloured dissolved organic matter (CDOM) in the epipelagic Eastern North Atlantic was investigated during a cruise in the summer 2009 by combining field observations and culture experiments. Dissolved organic carbon (DOC) and nitrogen (DON), the absorption spectra of CDOM and the fluorescence intensity of proteins (Ex/Em 280/320 nm; F(280/320)) and marine humic-like substances (F(320/410)) were measured in the upper 200 m. DOC and DON showed higher concentrations in the top 20 m than below, and DOC increased southwards, while DON decreased. F(280/320) and F(320/410) showed maxima near the deep chlorophyll maximum (at about 50 m), suggesting that these fluorophores were linked to phytoplankton production and the metabolism of the associated microbial community. The coloured and fluorescent fractions of DOM showed low levels south of the Azores Front, at about 35 °N, likely due to the accumulated photobleaching of the waters transported eastwards by the Azores current into the study area (at 20°W). Twelve culture experiments were also conducted with surface water (5 m) to assess the impact of microbial degradation processes on the bulk, coloured and fluorescent fractions of DOM. After 72 h of incubation in the darkness, 14±9% (average±SD) of the initial DON was consumed at an average rate of 0.24±0.14 μmol l-1 d-1 and the protein-like fluorescence decayed by 29±9% at a net rate of 0.06±0.03 QSU d-1. These rates were significantly lower south of the Azores front, suggesting that DOM in this region was of a more recalcitrant nature. Conversely, the marine humic-like fluorescence increased at a net rate of 0.013±0.003 QSU d-1. The close linear relationship of DON uptake with F(280/320) consumption (R2= 0.91, p <0.0001, n=12) and F(320/410) production (R2= 0.52, p <0.008, n=12) that we found during these incubation experiments suggest that the protein-like fluorescence can be used as a proxy for the dynamics of the labile DON pool

Effects of ocean acidification and hydrodynamic conditions on carbon metabolism and dissolved organic carbon (DOC) fluxes in seagrass populations.

Science.gov (United States)

Egea, Luis G; Jiménez-Ramos, Rocío; Hernández, Ignacio; Bouma, Tjeerd J; Brun, Fernando G

2018-01-01

Global change has been acknowledged as one of the main threats to the biosphere and its provision of ecosystem services, especially in marine ecosystems. Seagrasses play a critical ecological role in coastal ecosystems, but their responses to ocean acidification (OA) and climate change are not well understood. There have been previous studies focused on the effects of OA, but the outcome of interactions with co-factors predicted to alter during climate change still needs to be addressed. For example, the impact of higher CO2 and different hydrodynamic regimes on seagrass performance remains unknown. We studied the effects of OA under different current velocities on productivity of the seagrass Zostera noltei, using changes in dissolved oxygen as a proxy for the seagrass carbon metabolism, and release of dissolved organic carbon (DOC) in a four-week experiment using an open-water outdoor mesocosm. Under current pH conditions, increasing current velocity had a positive effect on productivity, but this depended on shoot density. However, this positive effect of current velocity disappeared under OA conditions. OA conditions led to a significant increase in gross production rate and respiration, suggesting that Z. noltei is carbon-limited under the current inorganic carbon concentration of seawater. In addition, an increase in non-structural carbohydrates was found, which may lead to better growing conditions and higher resilience in seagrasses subjected to environmental stress. Regarding DOC flux, a direct and positive relationship was found between current velocity and DOC release, both under current pH and OA conditions. We conclude that OA and high current velocity may lead to favourable growth scenarios for Z. noltei populations, increasing their productivity, non-structural carbohydrate concentrations and DOC release. Our results add new dimensions to predictions on how seagrass ecosystems will respond to climate change, with important implications for the

Effects of ocean acidification and hydrodynamic conditions on carbon metabolism and dissolved organic carbon (DOC fluxes in seagrass populations.

Directory of Open Access Journals (Sweden)

Luis G Egea

Full Text Available Global change has been acknowledged as one of the main threats to the biosphere and its provision of ecosystem services, especially in marine ecosystems. Seagrasses play a critical ecological role in coastal ecosystems, but their responses to ocean acidification (OA and climate change are not well understood. There have been previous studies focused on the effects of OA, but the outcome of interactions with co-factors predicted to alter during climate change still needs to be addressed. For example, the impact of higher CO2 and different hydrodynamic regimes on seagrass performance remains unknown. We studied the effects of OA under different current velocities on productivity of the seagrass Zostera noltei, using changes in dissolved oxygen as a proxy for the seagrass carbon metabolism, and release of dissolved organic carbon (DOC in a four-week experiment using an open-water outdoor mesocosm. Under current pH conditions, increasing current velocity had a positive effect on productivity, but this depended on shoot density. However, this positive effect of current velocity disappeared under OA conditions. OA conditions led to a significant increase in gross production rate and respiration, suggesting that Z. noltei is carbon-limited under the current inorganic carbon concentration of seawater. In addition, an increase in non-structural carbohydrates was found, which may lead to better growing conditions and higher resilience in seagrasses subjected to environmental stress. Regarding DOC flux, a direct and positive relationship was found between current velocity and DOC release, both under current pH and OA conditions. We conclude that OA and high current velocity may lead to favourable growth scenarios for Z. noltei populations, increasing their productivity, non-structural carbohydrate concentrations and DOC release. Our results add new dimensions to predictions on how seagrass ecosystems will respond to climate change, with important

Mercury in fish from the Madeira River and health risk to Amazonian and riverine populations.

Science.gov (United States)

Soares, José Maria; Gomes, José M; Anjos, Marcelo R; Silveira, Josianne N; Custódio, Flavia B; Gloria, M Beatriz A

2018-07-01

The objective of this study was to quantify total mercury in highly popular Amazonian fish pacu, curimatã, jaraqui, and sardinha from the Madeira River and to estimate the exposure to methylmercury from fish consumption. The samples were obtained from two locations - Puruzinho Igarapé and Santa Rosa - near Humaitá, Amazonia, Brazil in two seasons of 2015 (high and low waters). The fish were identified, weighed and measured, and lipids were quantified. Total mercury was determined by gold amalgamation-atomic absorption spectrometry. Mean levels were used to calculate exposure of Amazonian and riverine populations. There was significant correlation (p < 0.05) between length × weight for all fish; length × lipid and weight × lipid were significant only for pacu. Total mercury levels varied along muscle tissue for the fish, except for sardinha; therefore muscle from the dorsal area along the fish were sampled, homogenized and used for analysis. The levels of total mercury varied from 0.01 to 0.46 mg/kg, with higher median levels in sardinha (0.24 mg/kg), followed by curimatã (0.16 mg/kg), jaraqui (0.13 mg/kg) and pacu (0.04 mg/kg), corresponding with the respective feeding habits along the trophic chain. Total mercury levels were not affected by the location of fish capture and by high and low waters seasons. Total mercury correlated significantly with length and weight for jaraqui and with length for sardinha (negative correlation). Total mercury levels in fish complied with legislation; however, exposures to methylmercury from fish consumption overpassed the safe intake reference dose for sardinha for Amazonians; however, for the riverine communities, all of the fish would cause potential health risk, mainly for children and women of childbearing age. Copyright © 2018 Elsevier Ltd. All rights reserved.

Ozonation for degradation of pharmaceutical in hospital wastewater

DEFF Research Database (Denmark)

Bester, Kai; Hansen, Kamilla S; Spiliotopoulou, Aikaterini

-pollutants (Antoniou et al., 2013). In the present work, ozonation of biological treated hospital wastewater spiked with pharmaceuticals were performed to determine the required ozone dose for 90 % removal of the investigated pharmaceuticals. Effluents with different DOC level were used to investigate the effect...... of DOC on the removal of the pharmaceuticals. Furthermore, the effect of pH on ozone decomposition was investigated in relevant pH range....

DOC and DON Dynamics along the Bagmati Drainage Network in Kathmandu Valley

Science.gov (United States)

Bhatt, M. P.; McDowell, W. H.

2005-05-01

We studied organic matter dynamics and inorganic chemistry of the Bagmati River in Kathmandu valley, Nepal, to understand the influence of human and geochemical processes on chemical loads along the drainage system. Population density appears to be the most fundamental control on the chemistry of surface waters within the Bagmati drainage system. DOC concentration increases 10-fold with distance downstream (from 2.38 to 23.95 mg/L) and shows a strong relationship with human population density. The composition of river water (nutrients, Cl) suggests that sewage effluent to the river has a major effect on water quality. Concentrations were highest during summer, and lowest during the winter monsoon season. In contrast to DOC, DON concentration shows surprisingly little variation, and tends to decrease in concentration with distance downstream. Ammonium contributes almost all nitrogen in the total dissolved nitrogen fraction and the concentration of nitrate is negligible, probably due to rapid denitrification within the stream channel under relatively low-oxygen conditions. Decreases in sulfate along the stream channel may also be due to the reduction of sulfate to sulfide due to the heavy organic matter loading. Water quality is unacceptable for any use and the whole ecosystem is severely affected within the urban areas. Based on a comparison of downstream and upstream water quality, it appears that human activities along the Bagmati, principally inputs of human sewage, are largely responsible for the changes in surface water chemistry within Kathmandu valley.

Optimized treatment conditions for textile wastewater reuse using photocatalytic processes under UV and visible light sources.

Science.gov (United States)

Starling, Maria Clara V M; Castro, Luiz Augusto S; Marcelino, Rafaela B P; Leão, Mônica M D; Amorim, Camila C

2017-03-01

In this study, photo-Fenton systems using visible light sources with iron and ferrioxalate were tested for the DOC degradation and decolorization of textile wastewater. Textile wastewaters originated after the dyeing stage of dark-colored tissue in the textile industry, and the optimization of treatment processes was studied to produce water suitable for reuse. Dissolved organic carbon, absorbance, turbidity, anionic concentrations, carboxylic acids, and preliminary cost analysis were performed for the proposed treatments. Conventional photo-Fenton process achieved near 99 % DOC degradation rates and complete absorbance removal, and no carboxylic acids were found as products of degradation. Ferrioxalate photo-Fenton system achieved 82 % of DOC degradation and showed complete absorbance removal, and oxalic acid has been detected through HPLC analysis in the treated sample. In contrast, photo-peroxidation with UV light was proved effective only for absorbance removal, with DOC degradation efficiency near 50 %. Treated wastewater was compared with reclaimed water and had a similar quality, indicating that these processes can be effectively applied for textile wastewater reuse. The results of the preliminary cost analysis indicated costs of 0.91 to 1.07 US$ m -3 for the conventional and ferrioxalate photo-Fenton systems, respectively. Graphical Abstract ᅟ.

What advice is given to newly qualified doctors on Twitter? An analysis of #TipsForNewDocs tweets.

Science.gov (United States)

Rashid, Mohammed Ahmed; McKechnie, Doug; Gill, Deborah

2018-07-01

Twitter is a social media platform on which users post very brief messages that can be rapidly communicated across wide geographical areas and audiences. Many doctors use Twitter for personal as well as professional communications and networking. The #TipsForNewDocs hashtag is used on Twitter to give advice to newly qualified doctors as they commence their careers. This study explores the nature and focus of such advice. An analysis of Twitter activity containing the #TipsForNewDocs hashtag was performed using Symplur health care analytics software. Tweets sent during a peak 48-hour period in 2016 (immediately preceding the first day of work for newly qualified UK doctors) were studied. The geographical locations and professional backgrounds of participants were categorised and the content of tweets was subjected to thematic analysis. During 1 and 2 August 2016, 661 unique #TipsForNewDocs tweets were posted. A total of 621 (94.0%) were posted by people in the UK; 522 (79.0%) were posted by doctors, and the remainder by allied health care professionals and patients. The majority of included tweets focused on aspects of professional development, improving personal or professional knowledge, particularly tacit knowledge, and developing 'know-how'. These aspects of professional knowledge have previously been described as fundamental to professional education and training. However, a significant subset of tweets focused on accelerating socialisation into the profession, an essential step in joining a professional community. The tweets relating to socialisation were often humorous and colloquial in nature. Despite their brief and often jocular nature, #TipsForNewDocs tweets provided meaningful advice for newcomers to the profession, often focusing on tacit learning and professional socialisation. Hashtag-driven enquiries can be a valuable and time-efficient way of accessing and sharing tacitly held knowledge. Social media content analysis can provide valuable insights

Effect of Inorganic and Organic Carbon Enrichments (DIC and DOC) on the Photosynthesis and Calcification Rates of Two Calcifying Green Algae from a Caribbean Reef Lagoon.

Science.gov (United States)

Meyer, Friedrich W; Schubert, Nadine; Diele, Karen; Teichberg, Mirta; Wild, Christian; Enríquez, Susana

2016-01-01

Coral reefs worldwide are affected by increasing dissolved inorganic carbon (DIC) and organic carbon (DOC) concentrations due to ocean acidification (OA) and coastal eutrophication. These two stressors can occur simultaneously, particularly in near-shore reef environments with increasing anthropogenic pressure. However, experimental studies on how elevated DIC and DOC interact are scarce and fundamental to understanding potential synergistic effects and foreseeing future changes in coral reef function. Using an open mesocosm experiment, the present study investigated the impact of elevated DIC (pHNBS: 8.2 and 7.8; pCO2: 377 and 1076 μatm) and DOC (added as 833 μmol L-1 of glucose) on calcification and photosynthesis rates of two common calcifying green algae, Halimeda incrassata and Udotea flabellum, in a shallow reef environment. Our results revealed that under elevated DIC, algal photosynthesis decreased similarly for both species, but calcification was more affected in H. incrassata, which also showed carbonate dissolution rates. Elevated DOC reduced photosynthesis and calcification rates in H. incrassata, while in U. flabellum photosynthesis was unaffected and thalus calcification was severely impaired. The combined treatment showed an antagonistic effect of elevated DIC and DOC on the photosynthesis and calcification rates of H. incrassata, and an additive effect in U. flabellum. We conclude that the dominant sand dweller H. incrassata is more negatively affected by both DIC and DOC enrichments, but that their impact could be mitigated when they occur simultaneously. In contrast, U. flabellum can be less affected in coastal eutrophic waters by elevated DIC, but its contribution to reef carbonate sediment production could be further reduced. Accordingly, while the capacity of environmental eutrophication to exacerbate the impact of OA on algal-derived carbonate sand production seems to be species-specific, significant reductions can be expected under future

Effect of Inorganic and Organic Carbon Enrichments (DIC and DOC on the Photosynthesis and Calcification Rates of Two Calcifying Green Algae from a Caribbean Reef Lagoon.

Directory of Open Access Journals (Sweden)

Friedrich W Meyer

Full Text Available Coral reefs worldwide are affected by increasing dissolved inorganic carbon (DIC and organic carbon (DOC concentrations due to ocean acidification (OA and coastal eutrophication. These two stressors can occur simultaneously, particularly in near-shore reef environments with increasing anthropogenic pressure. However, experimental studies on how elevated DIC and DOC interact are scarce and fundamental to understanding potential synergistic effects and foreseeing future changes in coral reef function. Using an open mesocosm experiment, the present study investigated the impact of elevated DIC (pHNBS: 8.2 and 7.8; pCO2: 377 and 1076 μatm and DOC (added as 833 μmol L-1 of glucose on calcification and photosynthesis rates of two common calcifying green algae, Halimeda incrassata and Udotea flabellum, in a shallow reef environment. Our results revealed that under elevated DIC, algal photosynthesis decreased similarly for both species, but calcification was more affected in H. incrassata, which also showed carbonate dissolution rates. Elevated DOC reduced photosynthesis and calcification rates in H. incrassata, while in U. flabellum photosynthesis was unaffected and thalus calcification was severely impaired. The combined treatment showed an antagonistic effect of elevated DIC and DOC on the photosynthesis and calcification rates of H. incrassata, and an additive effect in U. flabellum. We conclude that the dominant sand dweller H. incrassata is more negatively affected by both DIC and DOC enrichments, but that their impact could be mitigated when they occur simultaneously. In contrast, U. flabellum can be less affected in coastal eutrophic waters by elevated DIC, but its contribution to reef carbonate sediment production could be further reduced. Accordingly, while the capacity of environmental eutrophication to exacerbate the impact of OA on algal-derived carbonate sand production seems to be species-specific, significant reductions can be expected

Sean Michaletz Directors Post Doc Fellow Report

Energy Technology Data Exchange (ETDEWEB)

Wilson, Cathy Jean [Los Alamos National Lab. (LANL), Los Alamos, NM (United States)

2017-10-30

Predicting climate change effects on plant function is a central challenge of global change biology and a primary mission of DOE. Although increasing temperatures and drought have been associated with reduced growth and increased mortality of plants, accurate prediction of such responses is limited by a lack of process-based theory linking climate and whole-plant physiology. This inability to predict forest mortality can cause significant biases in climate forecasts. One way forward is metabolic scaling theory (MST), which proposes that physiologic rates – from cells to the globe – are governed by the rates of resource distribution through vascular networks and the kinetics of resource utilization by metabolic reactions. MST has traditionally not considered rates of resource acquisition from organism-environment interactions, but it has an ideal mechanistic basis for doing so. As a first step towards integrating these processes, Sean has extended MST to characterize effects of temperature and precipitation on plant growth and ecosystem production. Sean’s post doc fellowship aimed to address a remaining shortcoming in that the new theory does not yet consider the physical processes of resource acquisition, and thus cannot mechanistically predict plant performance in a changing climate.

Mansonella ozzardi (Nematoda: Onchocercidae in the riverine population of the Tefé River, State of Amazonia, Brazil

Directory of Open Access Journals (Sweden)

Jansen Fernandes Medeiros

2014-01-01

Full Text Available Introduction: This study assessed the prevalence of Mansonella ozzardi in riverine communities of the Tefé River, Amazonas, Brazil. Methods: The prevalence of M. ozzardi was estimated by microscopic examination of thick blood smears. Results: The M. ozzardi prevalence rate was 6.3% (19/300. Filarial infection was found in 8 of the 11 communities surveyed, with prevalence rates varying from 2.5% to 22.2%. Conclusions: Tefé is a region of oil and natural gas exploration, in which there is a high turnover of workers. Migration patterns may facilitate the dissemination of mansonelliasis to other regions.

Regional nitrogen budgets and riverine N & P fluxes for the drainages to the North Atlantic Ocean: Natural and human influences

Science.gov (United States)

Howarth, R.W.; Billen, G.; Swaney, D.; Townsend, A.; Jaworski, N.; Lajtha, K.; Downing, J.A.; Elmgren, Ragnar; Caraco, N.; Jordan, T.; Berendse, F.; Freney, J.; Kudeyarov, V.; Murdoch, P.; Zhu, Z.-L.

1996-01-01

We present estimates of total nitrogen and total phosphorus fluxes in rivers to the North Atlantic Ocean from 14 regions in North America, South America, Europe, and Africa which collectively comprise the drainage basins to the North Atlantic. The Amazon basin dominates the overall phosphorus flux and has the highest phosphorus flux per area. The total nitrogen flux from the Amazon is also large, contributing 3.3 Tg yr-1 out of a total for the entire North Atlantic region of 13.1 Tg yr-1. On a per area basis, however, the largest nitrogen fluxes are found in the highly disturbed watersheds around the North Sea, in northwestern Europe, and in the northeastern U.S., all of which have riverine nitrogen fluxes greater than 1,000 kg N km-2 yr-1. Non-point sources of nitrogen dominate riverine fluxes to the coast in all regions. River fluxes of total nitrogen from the temperate regions of the North Atlantic basin are correlated with population density, as has been observed previously for fluxes of nitrate in the world's major rivers. However, more striking is a strong linear correlation between river fluxes of total nitrogen and the sum of anthropogenically-derived nitrogen inputs to the temperate regions (fertilizer application, human-induced increases in atmospheric deposition of oxidized forms of nitrogen, fixation by leguminous crops, and the import/export of nitrogen in agricultural products). On average, regional nitrogen fluxes in rivers are only 25% of these anthropogenically derived nitrogen inputs. Denitrification in wetlands and aquatic ecosystems is probably the dominant sink, with storage in forests perhaps also of importance. Storage of nitrogen in groundwater, although of importance in some localities, is a very small sink for nitrogen inputs in all regions. Agricultural sources of nitrogen dominate inputs in many regions, particularly the Mississippi basin and the North Sea drainages. Deposition of oxidized nitrogen, primarily of industrial origin, is the

Study of 210Po and 210Pb in the riverine environments of coastal Karnataka

International Nuclear Information System (INIS)

Narayana, Y.; Rajashekara, K.M.

2010-01-01

Activity of 210 Po and 210 Pb were measured in soil and sediment samples collected from the major rivers Kali, Sharavathi and Netravathi of Coastal Karnataka. The activity of these two radionuclides were determined by radiochemical separation of 210 Po and counting the activity using a ZnS(Ag) Alpha counter. The activity of 210 Pb was higher than that of 210 Po in the riverine environs. The 210 Po and 210 Pb content in sediment was found to increase with silt/clay and organic matter contents. However no significant correlation was found between the activity 210 Po and 210 Pb with pH in sediments. The activity of 210 Po and 210 Pb and influence of physico-chemical parameters on these radionuclides were studied and discussed in this paper.

Pan-arctic trends in terrestrial dissolved organic matter from optical measurements

Directory of Open Access Journals (Sweden)

Paul James Mann

2016-03-01

Full Text Available Climate change is causing extensive warming across arctic regions resulting in permafrost degradation, alterations to regional hydrology, and shifting amounts and composition of dissolved organic matter (DOM transported by streams and rivers. Here, we characterize the DOM composition and optical properties of the six largest arctic rivers draining into the Arctic Ocean to examine the ability of optical measurements to provide meaningful insights into terrigenous carbon export patterns and biogeochemical cycling. The chemical composition of aquatic DOM varied with season, spring months were typified by highest lignin phenol and dissolved organic carbon (DOC concentrations with greater hydrophobic acid content, and lower proportions of hydrophilic compounds, relative to summer and winter months. Chromophoric DOM (CDOM spectral slope (S275-295 tracked seasonal shifts in DOM composition across river basins. Fluorescence and parallel factor analysis identified seven components across the six Arctic rivers. The ratios of ‘terrestrial humic-like’ versus ‘marine humic-like’ fluorescent components co-varied with lignin monomer ratios over summer and winter months, suggesting fluorescence may provide information on the age and degradation state of riverine DOM. CDOM absorbance (a350 proved a sensitive proxy for lignin phenol concentrations across all six river basins and over the hydrograph, enabling for the first time the development of a single pan-arctic relationship between a350 and terrigenous DOC (R2 = 0.93. Combining this lignin proxy with high-resolution monitoring of a350, pan-arctic estimates of annual lignin flux were calculated to range from 156 to 185 Gg, resulting in shorter and more constrained estimates of terrigenous DOM residence times in the Arctic Ocean (spanning 7 months to 2½ years. Furthermore, multiple linear regression models incorporating both absorbance and fluorescence variables proved capable of explaining much of the

Pan-arctic trends in terrestrial dissolved organic matter from optical measurements

Science.gov (United States)

Mann, Paul; Spencer, Robert; Hernes, Peter; Six, Johan; Aiken, George; Tank, Suzanne; McClelland, James; Butler, Kenna; Dyda, Rachael; Holmes, Robert

2016-03-01

Climate change is causing extensive warming across arctic regions resulting in permafrost degradation, alterations to regional hydrology, and shifting amounts and composition of dissolved organic matter (DOM) transported by streams and rivers. Here, we characterize the DOM composition and optical properties of the six largest arctic rivers draining into the Arctic Ocean to examine the ability of optical measurements to provide meaningful insights into terrigenous carbon export patterns and biogeochemical cycling. The chemical composition of aquatic DOM varied with season, spring months were typified by highest lignin phenol and dissolved organic carbon (DOC) concentrations with greater hydrophobic acid content, and lower proportions of hydrophilic compounds, relative to summer and winter months. Chromophoric DOM (CDOM) spectral slope (S275-295) tracked seasonal shifts in DOM composition across river basins. Fluorescence and parallel factor analysis identified seven components across the six Arctic rivers. The ratios of 'terrestrial humic-like' versus 'marine humic-like' fluorescent components co-varied with lignin monomer ratios over summer and winter months, suggesting fluorescence may provide information on the age and degradation state of riverine DOM. CDOM absorbance (a350) proved a sensitive proxy for lignin phenol concentrations across all six river basins and over the hydrograph, enabling for the first time the development of a single pan-arctic relationship between a350 and terrigenous DOC (R2 = 0.93). Combining this lignin proxy with high-resolution monitoring of a350, pan-arctic estimates of annual lignin flux were calculated to range from 156 to 185 Gg, resulting in shorter and more constrained estimates of terrigenous DOM residence times in the Arctic Ocean (spanning 7 months to 2½ years). Furthermore, multiple linear regression models incorporating both absorbance and fluorescence variables proved capable of explaining much of the variability in

Degradation of riverine dissolved organic matter by seawater bacteria

NARCIS (Netherlands)

Rochelle-Newall, E.J.; Pizay, M-D.; Middelburg, J.J.; Boschker, H.T.S.; Gattuso, J.P.

2004-01-01

The functional response of a seawater bacterial community transplanted into freshwater dissolved organic matter (DOM) was investigated together with the response of natural populations of bacteria to size-fractioned natural source water. Seawater bacteria were incubated over a period of 8 d in

Cycling of DOC and DON by Novel Heterotrophic and Photoheterotrophic Bacteria in the Ocean: Final Report

Energy Technology Data Exchange (ETDEWEB)

Kirchman, David L. [Univ. of Delaware, Newark, DE (United States)

2008-12-09

The flux of dissolved organic matter (DOM) through aquatic bacterial communities is a major process in carbon cycling in the oceans and other aquatic systems. Our work addressed the general hypothesis that the phylogenetic make-up of bacterial communities and the abundances of key types of bacteria are important factors influencing the processing of DOM in aquatic ecosystems. Since most bacteria are not easily cultivated, the phylogenetic diversity of these microbes has to be assessed using culture-independent approaches. Even if the relevant bacteria were cultivated, their activity in the lab would likely differ from that under environmental conditions. This project found variation in DOM uptake by the major bacterial groups found in coastal waters. In brief, the data suggest substantial differences among groups in the use of high and molecular weight DOM components. It also made key discoveries about the role of light in affecting this uptake especially by cyanobacteria. In the North Atlantic Ocean, for example, over half of the light-stimulated uptake was by the coccoid cyanobacterium, Prochlorococcus, with the remaining uptake due to Synechococcus and other photoheterotrophic bacteria. The project also examined in detail the degradation of one organic matter component, chitin, which is often said to be the second most abundant compound in the biosphere. The findings of this project contribute to our understanding of DOM fluxes and microbial dynamics supported by those fluxes. It is possible that these findings will lead to improvements in models of the carbon cycle that have compartments for dissolved organic carbon (DOC), the largest pool of organic carbon in the oceans.

Using Google Docs to Enhance the Teacher Work Sample: Building e-Portfolios for Learning and Practice

Science.gov (United States)

Gugino, Jessica

2018-01-01

The use of teaching portfolios in teacher education programs is a widely accepted practice. This article describes how a traditional teacher work sample was transformed using the online platform, Google Docs. The use of online digital portfolios may help to satisfy both the need to evaluate teacher candidates' performance in special education…

Google Docs as a Tool for Collaborative Writing in the Middle School Classroom

Directory of Open Access Journals (Sweden)

Yanan Fan

2017-10-01

Full Text Available Aim/Purpose: In this study, the authors examine how an online word processing tool can be used to encourage participation among students of different language back-grounds, including English Language Learners. To be exact, the paper discusses whether student participation in anonymous collaborative writing via Google Docs can lead to more successful products in a linguistically diverse eighth-grade English Language Arts classroom. Background: English Language Learners (ELLs make up a considerable portion of elementary and secondary public school students, as language and ethnic diversity has become the norm in the United States. The research literature finds that ELLs are statistically behind their monolingual peers on such key language and academic development indicators as writing. Educators and researchers then turn to collaborative writing with the assistance of online technology. Although it is shown in literature to be a worthwhile endeavor for students of all ages and ability levels, no studies have investigated the differences it makes, namely, in comparison to traditional face-to-face collaboration in the classroom, and to anonymous online collaboration in the virtual space. Methodology: Through face-to-face, online, and anonymous writing activities, a rubric, and a survey, this quantitative study asks if anonymous collaborative writing, com-pared to other modalities, equalizes participation among students of varying language fluencies, and if anonymous collaborative writing, compared to other modalities, affect student comfort levels. Contribution: This builds on research of online collaborative writing tools and suggests that using such tools (Google Docs in particular is beneficial, especially for students who are building their language abilities. The study further reveals varied degree of success and student comfort level in participating writing tasks in three modalities. Findings: We ascertain that students of varying language

Red de Repositorios IODE/COI/Unesco de acceso abierto en Ciencias Marinas en América Latina y el Caribe: OceanDocs

Directory of Open Access Journals (Sweden)

Andrea Cristiani

2014-03-01

Full Text Available Se presenta la organización, funciones y evolución de la red de repositorios de acceso abierto OceanDocs, particularmente la experiencia de instituciones vinculadas a las Ciencias Marinas en América Latina y el Caribe. En el marco de las Redes de Datos e Información Oceanográfica de la Comisión Oceanográfica Intergubernamental (COI de UNESCO, surgieron iniciativas de repositorios locales y regionales, que más tarde se consolidan y dan lugar a la red internacional de repositorios en Ciencias Marinas:  OceanDocs. En la actualidad esta red está integrada por repositorios institucionales, repositorios regionales y un repositorio central alojado por la COI. OceanDocs cuenta con políticas comunes definidas, un Grupo Directivo conformado por especialistas de distintas áreas que planifica y establece las directrices para la red, coordinadores nacionales y regionales, Unidades de Información a nivel institucional responsables de la carga de documentos, y una creciente comunidad de usuarios a nivel global.

A formação pedagógica institucional para a docência na Educação Superior

Directory of Open Access Journals (Sweden)

Cláudia Chueire Oliveira

2011-08-01

Full Text Available Apresentam-se resultados de uma pesquisa sobre docência e formação pedagógica na universidade, visando contribuir para o processo de formação dos docentes que atuam na Educação Superior, colhendo subsídios para a elaboração de programas institucionais. A opção metodológica pautou-se na abordagem de cunho qualitativo, de caráter exploratório-descritivo. O questionário foi o instrumento para a coleta de dados junto aos docentes e estudantes de cursos de graduação. Os resultados indicam que a construção da docência superior e o ensino de boa qualidade precisam de investimentos institucionais pedagógicos, administrativos e materiais; a carreira docente universitária requer propostas e iniciativas institucionais que alterem dimensões do ensino e da aprendizagem e sua sustentação teórico-pedagógica; a qualidade do ensino deve superar o equívoco da unilateralidade da pesquisa como instrumentalização para a ação docente; as possibilidades e limites institucionais refletem escolhas da profissionalização e permitem mapeamento das bases epistemológicas da docência no campo da Educação Superior.

Light absorption properties of CDOM in the Changjiang (Yangtze) estuarine and coastal waters: An alternative approach for DOC estimation

Science.gov (United States)

Yu, Xiaolong; Shen, Fang; Liu, Yangyang

2016-11-01

Field measurements of CDOM absorption properties and DOC concentrations were collected in the Changjiang estuarine and coastal waters from 2011 to 2013. CDOM absorption coefficient at 355 nm (ag (355)) was found to be inversely correlated with salinity, with Pearson's coefficients r of -0.901 and -0.826 for summer and winter observations, respectively. Analysis results of the relationships between salinity and CDOM optical properties (i.e., absorption coefficient and spectral slope) suggested that terrigenous inputs dominated CDOM sources in the Changjiang estuary, but the proportion of terrigenous CDOM declined with increasing salinity. The level of CDOM in the Changjiang estuary was lower compared to some of the major estuaries in the world, which could be attributed to several controlling factors such as vegetation cover in the drainage basin, the origin of recharged streams and high sediment load in the Changjiang estuary. We further evaluated the relationships between CDOM and DOC and their mixing behavior among world's major estuaries. An empirical model was finally developed to estimate DOC concentration from ag (355) and spectral slope S275-295 using a non-linear regression. This empirical relationship was calibrated using the Cal dataset, and was validated with the Val dataset, resulting in an acceptable error with the R2 of 0.746, the RMSE of 20.99 μmol/L and the rMAD of 14.46%.

Organic carbon budget for the eastern boundary of the North Atlantic subtropical gyre: major role of DOC in mesopelagic respiration.

Science.gov (United States)

Santana-Falcón, Yeray; Álvarez-Salgado, Xosé Antón; Pérez-Hernández, María Dolores; Hernández-Guerra, Alonso; Mason, Evan; Arístegui, Javier

2017-08-31

Transports of suspended particulate (POC susp ) and dissolved (DOC) organic carbon are inferred from a box-model covering the eastern boundary of the North Atlantic subtropical gyre. Corresponding net respiration rates (R) are obtained from a net organic carbon budget that is based on the transport estimates, and includes both vertical and lateral fluxes. The overall R in the mesopelagic layer (100-1500 m) is 1.6 ± 0.4 mmol C m -2 d -1 . DOC accounts for up to 53% of R as a result of drawdown of organic carbon within Eastern North Atlantic Central Water (ENACW) that is entrained into sinking Mediterranean Overflow Water (MOW) that leads to formation of Mediterranean water (MW) at intermediate depths (~900 m). DOC represents 90% of the respired non-sinking organic carbon. When converted into oxygen units, the computed net respiration rate represents less than half the oxygen utilization rates (OUR) reported for the mesopelagic waters of the subtropical North Atlantic. Mesoscale processes in the area, not quantified with our approach, could account in part for the OUR differences observed between our carbon budget and other published studies from the North Atlantic, although seasonal or interannual variability could also be responsible for the difference in the estimates.

C-MORE Professional Development Training Program for Graduate Students and Post-Docs

Science.gov (United States)

Bruno, B. C.; DeLeo, F.; Bottjer, D.; Jungbluth, S.; Burkhardt, B.; Hawco, N.; Boiteau, R.

2012-12-01

The Center for Microbial Oceanography: Research and Education (C-MORE) is a National Science Foundation-sponsored Science and Technology Center. C-MORE comprises six partner institutions: University of Hawaii (headquarters), Massachusetts Institute of Technology, Woods Hole Oceanographic Institution, Oregon State University, University of California at Santa Cruz and Monterey Bay Aquarium Research Institute. C-MORE's Professional Development Training Program is aimed at equipping graduate students and post-docs at all six institutions with the skills and experiences needed to maximize their potential and succeed in their professional careers. This program is administered through the C-MORE Education Office and was developed in close collaboration with graduate students, post-docs, and faculty. This program has formal but flexible requirements. There is only one required module (Outreach). The seven optional modules include: Science Communication, Leadership, Mentoring, Teaching, Research Exchange, Diversity and Proposal Writing. Masters students choose three optional modules; Ph.D. students and post-docs choose five. Most modules consist of a training component, followed by a practical component. All participants will are expected to complete program evaluations. Below are some examples of program offerings: Science Communication Module In partnership with the Communication Partnership for Science and the Sea, C-MORE organized three Science Communication workshops at the University of Hawaii, Monterey Bay Aquarium Research Institute and Massachusetts Institute of Technology. These workshops train participants to distill their research into language that is free of jargon and accessible to a general audience. After the training, participants are asked to produce a communication product based on their research, such as a magazine article, press release, podcast or a blog. Diversity Module To date, C-MORE has organized three teleconferences on diversity, attended by

Physical factors controlling carbon cycling dynamics in blackwater river-dominated and particle dominated estuaries

Science.gov (United States)

Arellano, A. R.; Bianchi, T. S.; Osburn, C. L.; D'Sa, E. J.; Oviedo-Vargas, D.; Ward, N. D.; Joshi, I.

2017-12-01

While most blue carbon habitat (wetlands, seagrass beds and mangroves) research has focused on carbon burial/stocks and habitat fragmentation of these communities, few studies have examined physical factors that control exports and losses of blue carbon sources of organic matter (OM) to adjacent coastal waters. Here, we report on spatiotemporal changes in the composition and concentration of dissolved organic carbon (DOC), particulate organic carbon (POC), particulate nitrogen, pCO2, δ13C-DOC, δ13C-POC, δ13C-CO2, dissolved lignin-phenols (dΣ8), particulate lignin-phenols (pΣ8) and carbon normalized dissolved and particulate lignin phenol yields (dΛ8 and pΛ8) in surface waters of the Apalachicola and Barataria bays in the Gulf of Mexico. Discriminant analysis described spatial variability along canonical axis I (24.4%) while temporal variability was explained by canonical axis II (23.2%). Apalachicola Bay was low in POC concentration and characterized by high values for pCO2, DOC, C:N, dΣ8 and (Ad:Al)V. The latter three parameters indicated a clear terrestrial source of OM at Apalachicola Bay reflecting the importance of riverine DOM inputs in this system. In contrast, Barataria Bay was characterized by high values for POC, C:V, S:V, and δ13C-POC, indicating blue-carbon sources due to a lack of direct river inputs and high prevalence of wetlands, some recently submerged. Extreme weather, such as intense precipitation events in Apalachicola Bay and enhanced northerly winds in Barataria Bay were characterized by δ13C-CO2, dΛ8, C:V (Barataria), and C:N (Apalachicola). Results indicate that such physical factors can exert strong control on OM sources and sinks across the gradient of coastal wetlands and shelf waters and lead to enhanced transfer and degradation of wetland-derived blue carbon in coastal waters.

Ecological impacts of Prosopis invasion in Riverine forests of Kenya

NARCIS (Netherlands)

Muturi, G.M.

2012-01-01

Drylands occupy over 41% of the global land surface, with Africa and Asia accounting for 32% of the global total each. Because of poor resource management, resource overexploitation and periodic droughts, drylands have experienced severe land degradation. Land degradation is manifested in

Required ozone doses for removing pharmaceuticals from wastewater effluents

DEFF Research Database (Denmark)

Antoniou, Maria; Hey, Gerly; Rodríguez Vega, Sergio

2013-01-01

of each investigated API (DDO3) was determined for each effluent by fitting a first order equation to the remaining concentration of API at each applied ozone dose. Ozone dose requirements were found to vary significantly between effluents depending on their matrix characteristics.The specific ozone dose...... was then normalized to the dissolved organic carbon (DOC) of each effluent. The DDO3/DOC ratios were comparable for each API between the effluents.15 of the 42 investigated APIs could be classified as easily degradable (DDO3/DOC≤0.7), while 19 were moderately degradable (0.71.4). Furthermore, we predict...... that a reasonable estimate of the ozone dose required to remove any of the investigated APIs may be attained by multiplying the experimental average DDO3/DOC obtained with the actual DOC of any effluent....

Dissolved Black Carbon in the Headwaters-To Continuum of PARAÍBA do Sul River, Brazil

Science.gov (United States)

Marques, Jomar S. J.; Dittmar, Thorsten; Niggemann, Jutta; Almeida, Marcelo G.; Gomez-Saez, Gonzalo V.; Rezende, Carlos E.

2017-02-01

Rivers annually carry 25-28 Tg carbon in the form of pyrogenic dissolved organic matter (dissolved black carbon, DBC) into the ocean, which is equivalent to about 10% of the entire riverine land-ocean flux of dissolved organic carbon (DOC). The objective of this study was to identify the main processes behind the release and turnover of DBC on a riverine catchment scale. As a model system, we chose the headwater-to-ocean continuum of Paraíba do Sul River (Brazil), the only river system with long-term DBC flux data available. The catchment was originally covered by Atlantic rain forest (mainly C3 plants) which was almost completely destroyed over the past centuries by slash-and-burn. As a result, large amounts of wood-derived charcoal reside in the soils. Today, fire-managed pasture and sugar cane (both dominated by C4 plants) cover most of the catchment area. Water samples were collected along the river, at the main tributaries, and also along the salinity gradient in the estuary and up to 35 km offshore during three different seasons. DBC was determined on a molecular level as benzenepolycarboxylic acids (BPCAs). Stable carbon isotopes (δ13C) were determined in solid phase extractable DOC (SPE-DOC) to distinguish C4 and C3 sources. Our results clearly show a relationship between hydrology and DBC concentrations in the river, with highest DBC concentrations and fluxes in the wet season (flux of 770 moles .sec 1 in 2013 and 59 moles .sec 1 in 2014) and lowest in the dry season (flux of 27 moles .sec 1). This relationship indicates that DBC is mainly mobilized from the upper soil horizons during heavy rainfalls. The relationship between DBC concentrations and δ13C-SPE-DOC indicated that most of DBC in the river system originated from C3 plants, i.e. from the historic burning event of the Atlantic rain forest. A conservative mixing model could largely reproduce the observed DBC fluxes within the catchment and the land to ocean continuum. Comparably slight

Jevgenij V. Doc: We do not want to build a monument at Mochovce

International Nuclear Information System (INIS)

Janoska, J.

2004-01-01

In this paper the interview with the General Manager of Inter RAO JES - Jevgenij V. Doc is published. Inter RAO JES applies for the privatisation of Slovenske elektrarne (Slovak Electric - SE). According to the General Manager of Inter RAO JES, the company does not need a foreign partner to provide financial support after the privatisation of SE, but rather it requires a political support. Plans about Bohunice NPP and of completion of the Mochovce NPP as well as of privatisation of the SE by the Inter RAO JES are presented

Assessment of mercury exposure and malaria in a Brazilian Amazon riverine community

International Nuclear Information System (INIS)

Crompton, Peter; Ventura, Ana Maria; Souza, Jose Maria de; Santos, Elisabeth; Strickland, G. Thomas; Silbergeld, Ellen

2002-01-01

Small-scale gold mining in the Brazilian Amazon occurs in areas with high rates of malaria transmission. Amazonian populations can be exposed to mercury through direct contact with the mining process and/or through fish consumption. Because of data from experimental studies, we examined the potential for mercury to affect host response to malaria. A cross-sectional survey was done in Jacareacanga, a riverine community in Para state, in a region of intense alluvial gold mining. A sample of 205 persons was selected by cluster sampling from the total population of approximately 2000. A brief medical history and exam were conducted, malaria slides were obtained, and air samples were taken to measure mercury levels. The average hair mercury level was 8.6 μg/g, ranging from 0.3 to 83.2 μg/g. The most important predictors of elevated mercury levels were high fish consumption and low income. Although there was no prevalent malaria, the odds of reporting a past malaria infection was four times higher for those also reporting a history of working with mercury

Flood frequency matters: Why climate change degrades deep-water quality of peri-alpine lakes

Science.gov (United States)

Fink, Gabriel; Wessels, Martin; Wüest, Alfred

2016-09-01

Sediment-laden riverine floods transport large quantities of dissolved oxygen into the receiving deep layers of lakes. Hence, the water quality of deep lakes is strongly influenced by the frequency of riverine floods. Although flood frequency reflects climate conditions, the effects of climate variability on the water quality of deep lakes is largely unknown. We quantified the effects of climate variability on the potential shifts in the flood regime of the Alpine Rhine, the main catchment of Lake Constance, and determined the intrusion depths of riverine density-driven underflows and the subsequent effects on water exchange rates in the lake. A simplified hydrodynamic underflow model was developed and validated with observed river inflow and underflow events. The model was implemented to estimate underflow statistics for different river inflow scenarios. Using this approach, we integrated present and possible future flood frequencies to underflow occurrences and intrusion depths in Lake Constance. The results indicate that more floods will increase the number of underflows and the intensity of deep-water renewal - and consequently will cause higher deep-water dissolved oxygen concentrations. Vice versa, fewer floods weaken deep-water renewal and lead to lower deep-water dissolved oxygen concentrations. Meanwhile, a change from glacial nival regime (present) to a nival pluvial regime (future) is expected to decrease deep-water renewal. While flood frequencies are not expected to change noticeably for the next decades, it is most likely that increased winter discharge and decreased summer discharge will reduce the number of deep density-driven underflows by 10% and favour shallower riverine interflows in the upper hypolimnion. The renewal in the deepest layers is expected to be reduced by nearly 27%. This study underlines potential consequences of climate change on the occurrence of deep river underflows and water residence times in deep lakes.

Flux and Seasonality of Dissolved Organic Matter From the Northern Dvina (Severnaya Dvina) River, Russia