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Sample records for defoliant thidiazuron gossypium

  1. Disruption of the polar auxin transport system in cotton seedlings following treatment with the defoliant thidiazuron

    International Nuclear Information System (INIS)

    Suttle, J.C.

    1988-01-01

    The effect of the defoliant thidiazuron (TDZ) on basipetal auxin transport in petiole segments isolated from cotton (Gossypium hirsutum L. cv LG102) seedlings was examined using the donor/receiver agar block technique. Treatment of intact seedlings with TDZ at concentrations of 1 micromolar or greater resulted in a dose-dependent inhibition of 14 C-IAA transport in petiole segment isolated 1 or 2 days after treatment. Using 100 micromolar TDZ, the inhibition was detectable 19 hours after treatment and was complete by 27 hours. Both leaves and petiole segments exhibited a marked increase in ethylene production following treatment with TDZ at concentrations of 0.1 micromolar or greater. The involvement of ethylene in this TDA response was evaluated by examining the effects of two inhibitors of ethylene action: silver thiosulfate, 2,5-norbornadiene. One day after treatment, both inhibitors effectively antagonized the TDZ-induced inhibition of auxin transport. Two days after TDZ treatment both inhibitors were ineffective. The decrease in IAA transport in TDZ treated tissues was associated with increased metabolism of IAA. The transport of 14 C-2,4-dichlorophenoxyacetic acid was also inhibited by TDZ treatment. This inhibition was not accompanied by increased metabolism. Incorporation of TDZ into the receiver blocks had no effect on auxin transport. The ability of the phytotropin N-1-naphthylphthalamic acid to stimulate IAA uptake from a bathing medium was reduced in TDZ-treated tissues. This reduction is thought to reflect a decline in the auxin efflux system following TDZ treatment

  2. Cloreto de mepiquat, thidiazuron e ethephon aplicados no algodoeiro em Ponta Porã, MS Mepiquat chloride, thidiazuron and ethephon applied on cotton in Ponta Porã, MS, Brazil

    Directory of Open Access Journals (Sweden)

    Fernando Mendes Lamas

    1999-10-01

    Full Text Available O objetivo do presente estudo foi avaliar os efeitos de diferentes dosagens de cloreto de mepiquat, thidiazuron e ethephon, aplicadas parceladamente no algodoeiro (Gossypium hirsutum L. na Fazenda Itamarati, Ponta Porã, MS. As dosagens de cloreto de mepiquat foram: (0; 12,5 + 12,5 + 25,0 = 50; 25 + 25 + 25 = 75; 0 + 50 + 50 = 100; 12,5 + 62,5 + 50 = 125 g ha-1, com aplicações efetuadas aos 34, 47 e 62 dias após a emergência (DAE em 1993/94, e aos 42, 60 e 73 DAE, em 1994/95, enquanto o thidiazuron foi aplicado quando 70% dos capulhos estavam abertos, nas dosagens de 0, 45, 60 e 75 g ha-1; já o ethephon foi aplicado sete dias após o thidiazuron, quando já se observava desfolha de 85%, nas dosagens de 0, 960 e 1.440 g ha-1. O delineamento experimental utilizado foi o de blocos casualizados em faixa, com subparcelas subdivididas e quatro repetições. O cloreto de mepiquat proporcionou redução do número de frutos verdes, aumento do peso de 100 sementes e do peso médio de um capulho; a percentagem de desfolha aumentou com as dosagens de thidiazuron e ethephon; constatou-se que a interação cloreto de mepiquat x thidiazuron x ethephon foi significativa para percentagem de abertura de capulhos e produção de algodão em caroço.The objective of this study was to evaluate the effect of doses of mepiquat chloride, thidiazuron and ethephon on cotton (Gossypium hirsutum L., applied in parcels, and were surveyed in Itamarati Farm at Ponta Porã county. The mepiquat chloride doses were: (0.0; 12.5 + 12.5 + 25.0 = 50.0; 25.0 + 25.0 + 25.0 = 75.0; 0.0 + 50.0 + 50.0 = 100.0; 12.5 + 62.5 + 50.0 = 125.0 g ha-1. The applications were made at 34, 47 and 63 days after emergence(DAE in 1993/94 and at 42, 60 and 73 DAE in 1994/95. Thidiazuron was applied when 70% of bolls were opened at the doses 0.0, 45.0, 60.0 and 75.0 g ha-1. Ethephon was applied seven days after thidiazuron, when 85% defoliation was observed, in the doses of 0.0, 960.0 and 1,440.0 g

  3. Effect of different defoliants and application times on the yield and ...

    African Journals Online (AJOL)

    This study was conducted to determine the effect of different defoliants (Dropp ultra® (DU): thidiazuron+diuron and Roundup (RU): glyphosate) and application times [60, 75 and 90 days after flowering (DAF)] on cotton. The research was carried out at the Harran University, Faculty of Agriculture Research and Application ...

  4. Thidiazuron induced micropropagation of Hypericum triquetrifolium ...

    African Journals Online (AJOL)

    STORAGESEVER

    2009-08-04

    Aug 4, 2009 ... Hypericum genus is commonly used as a medicinal plant for its anti-depressant properties. Harvesting such medicinal ... Key words: Hypericum triquetrifolium, micropropagation, medicinal plant, thidiazuron. INTRODUCTION ..... Biotechnology of the micropropagation of medicinal and aromatic plants.

  5. DETERMINATION THE EFFECT OF DEFOLIATION TIMING ON COTTON YIELD AND QUALITY

    Directory of Open Access Journals (Sweden)

    Karademir Emine

    2007-12-01

    Full Text Available This study was carried out for determining the effect of different application times at 40, 50, 60 and 70 % boll opening and untreated plot of the defoliant on cotton yield, earliness and technological properties in Southeast Anatolia Region conditions in Turkey. Maras 92 cotton variety was used as plant material in the experiment field of the Southeast Anatolia Agricultural Research Institute during 2000-2001. Defoliant was including thidiazuron + diuron chemical substance. The result of this study showed that ginning percentage, 100 seed weight, seed germination percentage, fiber fineness, fiber length, fiber strength, reflectance, elongation and seed cotton yield were not affected by the treatment; plant height and first picking percentage in 2001, fiber uniformity in 2000 were 5 % significantly affected. This study showed that application of defoliant didn’t affect significantly yield and technological properties of cotton and after 40 % boll opening the defoliant can be used.

  6. thidiazuron improves adventitious bud and shoot regeneration

    African Journals Online (AJOL)

    Prof. Adipala Ekwamu

    Induction of adventitious buds and shoots from intact leaves and stem internode segments of two recalcitrant. Ugandan sweetpotato (Ipomoea batatas L.) cultivars was investigated in vitro on Murashige and Skoog (MS) medium, supplemented with 3 different levels (0.5, 2.0 and 4.0 µM) of Thidiazuron (TDZ). Shoots were.

  7. Thidiazuron: A multi-dimensional plant growth regulator | Guo ...

    African Journals Online (AJOL)

    Thidiazuron (TDZ) has gained a considerable attention during past decades due to its efficient role in plant cell and tissue culture. Wide array of physiological responses were observed in response to TDZapplication in different plant species. TDZ has shown both auxin and cytokinin like effects, although, chemically, it is ...

  8. thidiazuron improves adventitious bud and shoot regeneration in ...

    African Journals Online (AJOL)

    Prof. Adipala Ekwamu

    Induction of adventitious buds and shoots from intact leaves and stem internode segments of two recalcitrant. Ugandan sweetpotato (Ipomoea batatas L.) cultivars was investigated in vitro on Murashige and Skoog (MS) medium, supplemented with 3 different levels (0.5, 2.0 and 4.0 µM) of Thidiazuron (TDZ). Shoots were.

  9. Highly efficient degradation of thidiazuron with Ag/AgCl- activated carbon composites under LED light irradiation

    Energy Technology Data Exchange (ETDEWEB)

    Yang, Yisi [College of Bioscience and Biotechnology, Hunan Agricultural University, Changsha 410128 (China); Hubei Key Laboratory for Processing and Application of Catalytic Materials, Huanggang Normal University, Huanggang 438000 (China); College of Chemical Engineering, Huanggang Normal University, Huanggang 438000 (China); Zhang, Yan [Hubei Key Laboratory for Processing and Application of Catalytic Materials, Huanggang Normal University, Huanggang 438000 (China); College of Chemical Engineering, Huanggang Normal University, Huanggang 438000 (China); Dong, Mingguang; Yan, Ting; Zhang, Maosheng [College of Chemical Engineering, Huanggang Normal University, Huanggang 438000 (China); Zeng, Qingru, E-mail: 40083763@qq.com [College of Bioscience and Biotechnology, Hunan Agricultural University, Changsha 410128 (China)

    2017-08-05

    Highlights: • Photocatalytic degradation of thidiazuron was performed in a neutral water matrix. • This was carried out in the presence of Ag/AgCl-activated carbon composites and LED light. • The pH effect and the dominant active species were explored. • Degradation products and pathways in water were studied for the first time. - Abstract: Thidiazuron (TDZ; 1-phenyl-3-(1,2,3-thiadiazol-5-yl)urea) is one of the most widely used defoliant and easy to dissolve in surface water. Risk associated with the pesticide is not clearly defined, so it is important to remove/degrade TDZ with an efficient and environment friendly technology. Here, we investigated the use of Ag/AgCl-activated carbon (Ag/AgCl–AC) composites in photocatalytic degradation of TDZ under LED light. By the synergic effect of Ag/AgCl and AC, the optimum Ag/carbon weight ratio of 2:1 exhibited superior visible-light photocatalytic activity, the highest removal efficiency was close to 91% in pH 7 matrix. Different types of Ag/AgCl–AC composites were tested, all showed much faster photodegradation kinetics than bare Ag/AgCl in 210 min. The degradation products as identified by HPLC–MS revealed that the hydroxylation by hydroxyl radicals and that of oxidation by superoxide radicals as well as holes were the two main pathways for TDZ degradation. Results revealed that the adsorption concentrated TDZ molecules and the photocatalytically generated radicals rapidly degradated TDZ, the two contributions functioned together for removal of the pollutant from water.

  10. Multiresidue analysis of cotton defoliant, herbicide, and insecticide residues in water by solid-phase extraction and GC-NPD, GC-MS, and HPLC-diode array detection.

    Science.gov (United States)

    Potter, T L; Marti, L; Belflower, S; Truman, C C

    2000-09-01

    A multiresidue procedure was developed for analysis of cotton pesticide and harvest-aid chemicals in water using solid-phase extraction and analysis by GC-NPD, GC-MS, and HPLC-DAD. Target compounds included the defoliants tribufos, dimethipin, thidiazuron; the herbicide diuron; and the insecticide methyl parathion. Three solid-phase extraction (SPE) media, octadecylsilyl (ODS), graphitized carbon black (GCB), and a divinylbenzene-N-vinyl pyrollidine copolymer (DVBVP), were evaluated. On GCB and ODS, recoveries varied depending on compound type. Recoveries were quantitative for all compounds on DVBVP, ranging from 87 to 115% in spiked deionized water and surface runoff. The method detection limit was less than 0.1 microg L(-)(1). SPE with DVBVP was applied to post-defoliation samples of surface runoff and tile drainage from a cotton research plot and surface runoff from a commercial field. The research plot was defoliated with a tank mixture of dimethipin and thidiazuron, and the commercial field, with tribufos. Dimethipin was detected (1.9-9.6 microg L(-)(1)) in all research plot samples. In the commercial field samples, tribufos concentration ranged from 0.1 to 135 microg L(-)(1). An exponentially decreasing concentration trend was observed with each successive storm event.

  11. Future Risk of Gypsy Moth Defoliation

    Data.gov (United States)

    U.S. Environmental Protection Agency — Data from the suitable habitat combined with forest density, and adjusted by prefered species basal area and the predicited geographic pattern of defoliation can be...

  12. Carry-over effect of Thidiazuron on banana in vitro proliferation at ...

    African Journals Online (AJOL)

    Thidiazuron (TDZ) is an active cytokinin that was shown to induce increased shoot proliferation and habituation in black walnut, Phaseolus lunatus and evergreen azalea, which are tree species but has not been widely investigated in bananas. Unlike other cytokines commonly in use that are adeninebased, TDZ is a urea ...

  13. Effect of thidiazuron on in vivo shoot proliferation of popular banana ...

    African Journals Online (AJOL)

    SARAH

    2014-09-30

    Sep 30, 2014 ... Mzuzu underscore the need for further studies to determine alternative best cytokine-based growth regulators. Key words: Thidiazuron, in vivo proliferation, Sucker growth, Banana. INTRODUCTION. In vivo macropropagation is an alternative technique for mass production of banana planting materials.

  14. Thidiazuron-induced in vitro bud organogenesis of the date palm ...

    African Journals Online (AJOL)

    Thidiazuron-induced in vitro bud organogenesis of the date palm (Phoenix dactylifera L.) CV. Hillawi. AMW Al-Mayahi. Abstract. The objective of the present was to enhance the frequency of plant regeneration in date palm (Phoenix dactylifera L.) cv. Hillawi. Explants were incubated on Murashige and Skoog (MS) medium ...

  15. Pencapaian Fase Embriosomatik Manggis (Garcinia mangostana L. dengan Penambahan Thidiazuron dalam Medium Setengah MS Cair

    Directory of Open Access Journals (Sweden)

    Innaka Ageng Rineksane

    2016-02-01

    Full Text Available One of the problems related to the establishment of mangosteen plantation is to obtain seedlings throughout the year, which can be solved by micropropagation.   The propagation of Mangosteen was done through somatic embryogenesis. The objective of this study was to determine the effect of Thidiazuron concentration in ½ MS medium to achieve somatic embryo stages of mangosteen seed. The study consisted of two experiments. Experiment 1: The embryogenic callus c.a.1 g derived from MS solid medium containing of Thidiazuron (0,1; 0,5; dan 1 mg/l and 2,4-Dichlorophenoxy acetic acid (4,6,8 dan 10 mg/l was subcultured into ½ MS0 liquid medium. 2. The embryogenic callus from the previous medium were subcultured into ½ MS liquid medium containing Thidiazuron (0, 1, 2, 4 dan 8 mg/L and Casein hydrolysate 500 mg/L. The results showed that cell suspension were developed after mangosteen embryogenic callus subcultured into ½ MS0 liquid medium.  Somatic embryo stages such as globular, heart and torpedo were formed after the calli derived from the previous ½ MS solid medium containing 10 mg/L 2,4-D and 1 mg/L Thidiazuron were subcultured into ½ MS0 liquid medium in 8 weeks.  Cell suspension in ½ MS liquid medium with or without the addition of  Thidiazuron and Casein hydrolysate has induced the formation of embryo somatic stages such as globular, heart and torpedo after 6 months of incubation.

  16. The response of Acacia karroo plants to defoliation by hand ...

    African Journals Online (AJOL)

    Shoot production of all plants defoliated by hand was no different to that of the undefoliated control plants and was considerably less than that of the plants defoliated by goats. Keywords: acacia karroo; browse production; browsing; clipping; defoliation; goats; growth stimulation; leaf growth; leaves; shoot growth; shoot ...

  17. The effect of selective defoliation and fertilization on Cymbopogon ...

    African Journals Online (AJOL)

    A small plot trial with different heights of defoliation of unpalatable and other plant species at three levels of fertilization was conducted over a three year period in Cymbopogon-Themeda veld. Keywords: defoliations|fertilisation|veld|defoliation heights|unpalatable plants|plant species|simulations|grazing ...

  18. Simulated impacts of insect defoliation on forest carbon dynamics

    Science.gov (United States)

    D. Medvigy; K.L. Clark; N.S. Skowronski; K.V.R. Schäfer

    2012-01-01

    Many temperate and boreal forests are subject to insect epidemics. In the eastern US, over 41 million meters squared of tree basal area are thought to be at risk of gypsy moth defoliation. However, the decadal-to-century scale implications of defoliation events for ecosystem carbon dynamics are not well understood. In this study, the effects of defoliation intensity,...

  19. Gypsy moth egg-mass density and subsequent defoliation

    Science.gov (United States)

    Robert W. Campbell

    1966-01-01

    The relationship between insect density and subsequent defoliation is usually important among the many factors involved in deciding if, when, and where to take control action against a defoliator such as the gypsy moth. Unfortunately, the proportion of the foliage that will be removed by a defoliator in any given place and year depends not only upon the number of...

  20. The influence of nitrogen and defoliation on digestibility and fibre ...

    African Journals Online (AJOL)

    OMD, NDF and ADF content were significantly (P < 0.01) influenced by N level, defoliation interval and the interaction between these two factors. Nitrogen level had a lesser influence on OMD, NDF and ADF than defoliation interval, because defoliation interval exerts a greater influence on plant growth stage and maturity ...

  1. Gossypium arboreum GHSP26 enhances drought tolerance in Gossypium hirsutum.

    Science.gov (United States)

    Maqbool, Asma; Abbas, Waseem; Rao, Abdul Qayyum; Irfan, Muhammad; Zahur, Muzna; Bakhsh, Allah; Riazuddin, Shiekh; Husnain, Tayyab

    2010-01-01

    Heat-shock proteins (HSP) are molecular chaperones for protein molecules. These proteins play an important role in protein-protein interactions such as, folding and assisting in the establishment of proper protein conformation and prevention of unwanted protein aggregation. A small HSP gene GHSP26 present in Gossypium arboreum responds to dehydration. In the present study, an attempt was made to overcome the problem of drought stress in cotton. A cDNA of GHSP26 was isolated from G. arboreum, cloned in plant expression vector, pCAMBIA-1301 driven by the cauliflower mosaic virus 35S promoter and introduced into Gossypium hirsutum. The integration and expression studies of putative transgenic plants were performed through GUS assay; PCR from genomic DNA, and quantitative real-time PCR analysis. Transgenic cotton plants showed an enhanced drought tolerance, suggesting that GHSP26 may play a role in plant responsiveness to drought.

  2. Induction of Somatic Embryogenesis in Sengon (Falcataria moluccana With Thidiazuron and Light Treatments

    Directory of Open Access Journals (Sweden)

    Ari Sunandar

    2017-04-01

    Full Text Available Falcataria moluccana is important for reforestation and afforestation in Indonesia. However, epidemic of gall rust disease in F. moluccana plantations decreases its productivity. Genetic engineering is an alternative solution to against gall rust disease. Somatic embryogenesis is an efficient in vitro plant regeneration for successful plant improvement through genetic engineering. The objective of this study was to investigate the effect of thidiazuron and light treatments on the induction of somatic embryogenesis of F. moluccana. The effects of thidiazuron concentration (5, 10 or 15 μM and light (continuous light, 7 days of dark followed by light, or continuous dark on the induction of somatic embryogenesis in leaf explants were assessed. The highest production of somatic embryos was obtained in 5 μM thidiazuron and dark treatments for 7 days followed by light in Murashige and Skoog medium supplemented with 1.2 g/L proline. Histological analysis in globular and cotyledon stages confirmed that cells had progressed to secondary somatic embryogenesis. This research needs more improvements to become a successful and efficient somatic embryogenesis method and as a potential method for successful plant improvement through genetic engineering in F. moluccana.

  3. Simulated impacts of insect defoliation on forest carbon dynamics

    International Nuclear Information System (INIS)

    Medvigy, D; Clark, K L; Skowronski, N S; Schäfer, K V R

    2012-01-01

    Many temperate and boreal forests are subject to insect epidemics. In the eastern US, over 41 million meters squared of tree basal area are thought to be at risk of gypsy moth defoliation. However, the decadal-to-century scale implications of defoliation events for ecosystem carbon dynamics are not well understood. In this study, the effects of defoliation intensity, periodicity and spatial pattern on the carbon cycle are investigated in a set of idealized model simulations. A mechanistic terrestrial biosphere model, ecosystem demography model 2, is driven with observations from a xeric oak–pine forest located in the New Jersey Pine Barrens. Simulations indicate that net ecosystem productivity (equal to photosynthesis minus respiration) decreases linearly with increasing defoliation intensity. However, because of interactions between defoliation and drought effects, aboveground biomass exhibits a nonlinear decrease with increasing defoliation intensity. The ecosystem responds strongly with both reduced productivity and biomass loss when defoliation periodicity varies from 5 to 15 yr, but exhibits a relatively weak response when defoliation periodicity varies from 15 to 60 yr. Simulations of spatially heterogeneous defoliation resulted in markedly smaller carbon stocks than simulations with spatially homogeneous defoliation. These results show that gypsy moth defoliation has a large effect on oak–pine forest biomass dynamics, functioning and its capacity to act as a carbon sink. (letter)

  4. Defoliation effects on pasture photosynthesis and respiration

    Science.gov (United States)

    Ecosystem C gain or loss from managed grasslands can depend on the type and intensity of management practices that are employed. However, limited information is available at the field scale on how the type of defoliation, specifically grazing vs. cutting, affects gross primary productivity (GPP) an...

  5. INFLUENCE BY ARTIFICIAL DEFOLIATION AND NPK FERTILIZER ...

    African Journals Online (AJOL)

    Dr. K.E. Law-Ogbomo

    of dry pod per stand, number of seeds per pod and stand. Obtained data were analyzed using analysis of variance procedure for split – split plot design and means were compared using LSD at 5 % level of significance. Results obtained indicated that defoliation considerably affected plant height and days to 50 % flowering.

  6. Defoliation management affects morphogenetic and structural ...

    African Journals Online (AJOL)

    ... leaf accumulation rates of both grass and legume. Therefore, to enhance productivity and stability when these species are associated we recommend defoliating at 90–95% LI, which represents a canopy height ranging from 26 to 32 cm. Keywords: Arachis pintoi, Brachiaria brizantha, palisade grass, warm-season forage ...

  7. Stream Response to an Extreme Defoliation Event

    Science.gov (United States)

    Gold, A.; Loffredo, J.; Addy, K.; Bernhardt, E. S.; Berdanier, A. B.; Schroth, A. W.; Inamdar, S. P.; Bowden, W. B.

    2017-12-01

    Extreme climatic events are known to profoundly impact stream flow and stream fluxes. These events can also exert controls on insect outbreaks, which may create marked changes in stream characteristics. The invasive Gypsy Moth (Lymantria dispar dispar) experiences episodic infestations based on extreme climatic conditions within the northeastern U.S. In most years, gypsy moth populations are kept in check by diseases. In 2016 - after successive years of unusually warm, dry spring and summer weather -gypsy moth caterpillars defoliated over half of Rhode Island's 160,000 forested ha. No defoliation of this magnitude had occurred for more than 30 years. We examined one RI headwater stream's response to the defoliation event in 2016 compared with comparable data in 2014 and 2015. Stream temperature and flow was gauged continuously by USGS and dissolved oxygen (DO) was measured with a YSI EXO2 sonde every 30 minutes during a series of deployments in the spring, summer and fall from 2014-2016. We used the single station, open channel method to estimate stream metabolism metrics. We also assessed local climate and stream temperature data from 2009-2016. We observed changes in stream responses during the defoliation event that suggest changes in ET, solar radiation and heat flux. Although the summer of 2016 had more drought stress (PDSI) than previous years, stream flow occurred throughout the summer, in contrast to several years with lower drought stress when stream flow ceased. Air temperature in 2016 was similar to prior years, but stream temperature was substantially higher than the prior seven years, likely due to the loss of canopy shading. DO declined dramatically in 2016 compared to prior years - more than the rising stream temperatures would indicate. Gross Primary Productivity was significantly higher during the year of the defoliation, indicating more total fixation of inorganic carbon from photo-autotrophs. In 2016, Ecosystem Respiration was also higher and Net

  8. Selection of Gossypium hirsutum genotypes for interspecific ...

    African Journals Online (AJOL)

    FORRESTER

    ARS), Crop Genetics Research Unit in. Stoneville, Mississippi ... Key words: Cotton, germplasm, immature embryo, tissue culture, wide-hybridization. INTRODUCTION. Tetraploid upland cotton, Gossypium hirsutum L., is comprised of over 90% ...

  9. Proceedings: integrated management and dynamics of forest defoliating insects

    Science.gov (United States)

    A.M. Liebhold; M.L. McManus; I.S. Otvos; S.L.C Fosbroke

    2001-01-01

    This publication contains 18 research papers about the population ecology and management of forest insect defoliators. These papers were presented at a joint meeting of working parties s7.03.06, "Integrated Management of Forest Defoliating Insects," and S7.03.07, "Population Dynamics of Forest Insects," of the International Union of...

  10. Non-defoliating and defoliating strains from cotton correlate with races 1 and 2 of Verticillium dahliae

    Science.gov (United States)

    Verticillium wilt caused by Verticillium dahliae is an important disease of cotton worldwide. Isolates of V. dahliae can be characterized as race 1 or race 2 based on the responses of differential cultivars of tomato and lettuce or as defoliating or non-defoliating based on symptom expression in cot...

  11. Effect of intensity and frequency of defoliation on aerial growth and ...

    African Journals Online (AJOL)

    Acacia karroo trees were defoliated by goats at two intensities and four frequencies; 2, 4, 8 and 12-weekly. Leaf accumulation and carbohydrate reserve levels were compared to a non-defoliated control, and to plants (defoliation controls) which were defoliated for the first time that season each time a frequency treatment ...

  12. A general Landsat model to predict canopy defoliation in broadleaf deciduous forests

    Science.gov (United States)

    Phillip A. Townsend; Aditya Singh; Jane R. Foster; Nathan J. Rehberg; Clayton C. Kindon; Keith N. Eshleman; Steven W. Seagle

    2012-01-01

    Defoliation by insect herbivores can be a persistent disturbance affecting ecosystem functioning. We developed an approach to map canopy defoliation due to gypsy moth based on site differences in Landsat vegetation index values between non-defoliation and defoliation dates. Using field data from two study areas in the U.S. central Appalachians and five different years...

  13. Calogênese e brotações adventícias em tecido somático de Kiwi suplementados com Thidiazuron Callogenesis and adventitious shoots in Kiwi somatic tissue suplemented with Thidiazuron

    Directory of Open Access Journals (Sweden)

    Eva Choer

    1997-08-01

    Full Text Available Discos foliares com 0.46cm² foram coletados de brotações adventícias de Kiwi cultivados in vitro pertencentes a cv. Matua e condicionados por 24 horas em meio líquido contendo 2,4- D (5mg/l. Após este período o material foi cultivado em meio MS acrescido com Thidiazuron nas seguintes concentrações: 0; 0,25; 0,5; 1; 2; 4; 8 e 16mg/l. Os explantes inoculados com a superfície adaxial em contato com o meio de cultura permaneceram três semanas em ambiente escuro a temperatura de 25°C e, posteriormente, foram transferidos para sala de crescimento com fotoperíodo de 16 horas, 2.000 lux de luminância e temperatura de 23 ± 2°C. Nesse ambiente os tratamentos foram mantidos por mais três semanas e então avaliados. As doses mais elevadas de Thidiazuron (8 e 16 mg/l mostraram-se fitotóxicas, levando os explantes à morte. A formação de raízes foi observada apenas no tratamento controle. A intensidade de formação de calos, numero de brotações adventícias, peso da matéria seca e o número de gemas apresentaram comportamento quadrático, em relação às concentrações de Thidiazuron. O Thidiazuron não foi eficiente para formar brotações adventícias de Kiwi. A intensidade de formação de calo aumentou nas concentrações de até 2,21mg/l deThidiazuron, diminuindo a partir deste valor.Leaf discs (0.46cm² were collected from adventitious shoots of 'Matua' Kiwi cultivated in vitro and were conditioned during 24 hours in liquid medium with 2.4- D (5mg/l. After this period they were cultured in MS medium additioned with Thidiazuron in the concentrations following: 0; 0.25; 0.5; 1; 2; 4; 8 and 16mg/l. Explants were inoculated with the adaxial surface in contact with the culture medium and were maintained for about three weeks at 25°C in darkness. After this time they were kept for three weeks in a growth room and exposed to a 16 hour photoperiod, light intensity of approximately 2,000 lux and temperature of 23 ± 2°C. The higher

  14. Forecasting defoliation by the gypsy moth in oak stands

    Science.gov (United States)

    Robert W. Campbell; Joseph P. Standaert

    1974-01-01

    A multiple-regression model is presented that reflects statistically significant correlations between defoliation by the gypsy moth, the dependent variable, and a series of biotic and physical independent variables. Both possible uses and shortcomings of this model are discussed.

  15. Absence of effects on nutrient budgets after insect defoliation

    Energy Technology Data Exchange (ETDEWEB)

    Fernandez, C.; Vega, J. A.; Bara, S.; Alonso, M.; Fonturbel, T.

    2011-07-01

    Nutrient export via stream flow after the defoliation by Gonipterus scutellatus Gill. in a Eucalyptus globulus Labill. watershed in Galicia (NW Spain) was monitored from 1999 to 2006. The effects of such defoliation on nutrients balance had not been previously evaluated. Insect defoliation caused no significant changes in stream flow nutrient concentrations during the period of study compared with the pre-perturbation period and nutrient exports in stream flow were compensated via precipitation in all cases. The results presented here show that in spite of the reduction in E.globulus growth caused by the defoliation, nutrient balances were positive, suggesting a minor impact in the soil-plant system nutrient budget. (Author) 35 refs.

  16. Remote monitoring of forest insect defoliation. A review

    Energy Technology Data Exchange (ETDEWEB)

    Rullan-Silva, C. D.; Olthoff, A. E.; Delgado de la Mata, J. A.; Pajares-Alonso, J. A.

    2013-07-01

    Aim of study: This paper reviews the global research during the last 6 years (2007-2012) on the state, trends and potential of remote sensing for detecting, mapping and monitoring forest defoliation caused by insects. Area of study: The review covers research carried out within different countries in Europe and America. Main results: A nation or region wide monitoring system should be scaled in two levels, one using time-series with moderate to coarse resolutions, and the other with fine or high resolution. Thus, MODIS data is increasingly used for early warning detection, whereas Landsat data is predominant in defoliation damage research. Furthermore, ALS data currently stands as the more promising option for operative detection of defoliation. Vegetation indices based on infrared-medium/near-infrared ratios and on moisture content indicators are of great potential for mapping insect pest defoliation, although NDVI is the most widely used and tested. Research highlights: Among most promising methods for insect defoliation monitoring are Spectral Mixture Analysis, best suited for detection due to its sub-pixel recognition enhancing multispectral data, and use of logistic models as function of vegetation index change between two dates, recommended for predicting defoliation. (Author)

  17. Remote Monitoring of Forest Insect Defoliation -A Review-

    Directory of Open Access Journals (Sweden)

    C.D. Rullan-Silva

    2013-12-01

    Full Text Available Aim of study: This paper reviews the global research during the last 6 years (2007-2012 on the state, trends and potential of remote sensing for detecting, mapping and monitoring forest defoliation caused by insects.Area of study: The review covers research carried out within different countries in Europe and America.Main results: A nation or region wide monitoring system should be scaled in two levels, one using time-series with moderate to coarse resolutions, and the other with fine or high resolution. Thus, MODIS data is increasingly used for early warning detection, whereas Landsat data is predominant in defoliation damage research. Furthermore, ALS data currently stands as the more promising option for operative detection of defoliation.Vegetation indices based on infrared-medium/near-infrared ratios and on moisture content indicators are of great potential for mapping insect pest defoliation, although NDVI is the most widely used and tested.Research highlights: Among most promising methods for insect defoliation monitoring are Spectral Mixture Analysis, best suited for detection due to its sub-pixel recognition enhancing multispectral data, and use of logistic models as function of vegetation index change between two dates, recommended for predicting defoliation.Key words: vegetation damage; pest outbreak; spectral change detection.

  18. Selection of Gossypium hirsutum genotypes for interspecific ...

    African Journals Online (AJOL)

    Ovule culture is one of the techniques currently used to introgress desirable traits from Gossypium arboreum germplasm into G. hirsutum cultivars. Twenty-six (26) G. hirsutum breeding lines were used as female parents in crosses with five G. arboreum accessions to determine if the G. hirsutum parent influenced the ...

  19. (Gossypium hirsutum L.) CONTRE LA FUSARIOSE EFFECT ...

    African Journals Online (AJOL)

    EFFECT OFOLIGOSACCHARIDE FRACTION OF Fusarium oxysporum f. sp. vasinfectum ON COTTON PROTECTION (Gossypium hirsutum L.) AGAINST FUSARIUM WILT. R. A. N'GORAN épse BLA1,2, H. T. KOUAKOU2, F. K. Y. KONAN2, B. CAMARA1,. N. K. KOUASSI3 et D. KONE1. 1Laboratoire de Physiologie Végétale, ...

  20. Assessing Pine Processionary Moth Defoliation Using Unmanned Aerial Systems

    Directory of Open Access Journals (Sweden)

    Adrián Cardil

    2017-10-01

    Full Text Available Pine processionary moth (PPM is one of the most destructive insect defoliators in the Mediterranean for many conifers, causing losses of growth, vitality and eventually the death of trees during outbreaks. There is a growing need for cost-effective monitoring of the temporal and spatial impacts of PPM in forest ecology to better assess outbreak spread patterns and provide guidance on the development of measures targeting the negative impacts of the species on forests, industry and human health. Remote sensing technology mounted on unmanned aerial systems (UASs with high-resolution image processing has been proposed to assess insect outbreak impacts at local and forest stand levels. Here, we used UAS-acquired RGB imagery in two pine sites to quantify defoliation at the tree-level and to verify the accuracy of the estimates. Our results allowed the identification of healthy, infested and completely defoliated trees and suggested that pine defoliation estimates using UASs are robust and allow high-accuracy (79% field-based infestation indexes to be derived that are comparable to those used by forest technicians. When compared to current field-based methods, our approach provides PPM impact assessments with an efficient data acquisition method in terms of time and staff, allowing the quantitative estimation of defoliation at tree-level scale. Furthermore, our method could be expanded to a number of situations and scaled up in combination with satellite remote sensing imagery or citizen science approaches.

  1. Defoliation height and potassium fertilization of Mulato II grass

    Directory of Open Access Journals (Sweden)

    Carlos Eduardo Avelino Cabral

    2017-08-01

    Full Text Available A pot trial in greenhouse conditions was carried out to identify at which defoliation height Mulato II grass (Urochloa hibrida cv. Mulato II should be managed and to determine whether potassium fertilization is necessary in soil with high potassium content. The experiment was carried out in a greenhouse in a randomized block design with six treatments and five replications. Treatments consisted of a 3 × 2 factorial arrangement, with three defoliation heights (50, 65, and 80 cm and with or without potassium maintenance fertilization. The production characteristics and chemical composition of the forage plant were evaluated. There was no interaction effect between defoliation height and fertilization with or without potassium on any of the analyzed variables, except for mineral content in Mulato II grass. The tillers and leaves number, shoot dry matter, leaf+sheath, root system, and residue were influenced by defoliation heights and potassium fertilization, except for the leaf blades and root dry matter, leaf blade/stem+sheath ratio, and leaves number, which were not influenced by potassium fertilization. Higher shoot dry matter was observed at the heights of 65 and 80 cm; however, comparing these two heights, leaf + sheath dry matter was lower at 65 cm. Regarding the grass’s chemical composition, there was an increase in neutral and acid detergent fiber and indigestible neutral detergent fiber contents as the defoliation height increased, which resulted in lower production of potentially digestible dry matter, which can compromise the potential use of the forage by animals. Among evaluated treatments, Mulato II grass defoliation is recommended for a maximum height of 65 cm. Potassium fertilization increases the yield and the potentially digestible dry matter content of Mulato II grass, even when cultivated in soil with high potassium content.

  2. Comparative Proteomic Analysis of Gossypium thurberi in Response to Verticillium dahliae Inoculation

    Directory of Open Access Journals (Sweden)

    Weiping Fang

    2015-10-01

    Full Text Available Verticillium wilt is threatening cotton productivity globally. This disease is caused by soil-borne Verticillium dahliae which directly infects cotton roots, and exclusively colonizes and occludes xylem vessels, finally resulting in necrosis, defoliation, and most severely, plant death. For the first time, iTRAQ (isobaric tags for relative and absolute quantification was applied to screen the differentially expressed proteins of Gossypium thurberi inoculated with V. dahliae. A total of 6533 proteins were identified from the roots of G. thurberi after inoculation with V. dahliae, and 396 showed up- and 279 down-regulated in comparison to a mock-inoculated roots. Of these identified proteins, the main functional groups were those involved in cell wall organization and reinforcement, disease-resistant chemicals of secondary metabolism, phytohormone signaling, pathogenesis-related proteins, and disease-resistant proteins. Physiological and biochemical analysis showed that peroxidase activity, which promotes the biosynthesis and accumulation of lignin, was induced early in the hypocotyl after inoculation with V. dahliae. Similarly, salicylic acid also accumulated significantly in hypocotyl of the seedlings after inoculation. These findings provide an important knowledge of the molecular events and regulatory networks occurring during G. thurberi-V. dahliae interaction, which may provide a foundation for breeding disease-resistance in cotton.

  3. Polyploidization effect in two diploid cotton ( Gossypium herbaceum ...

    African Journals Online (AJOL)

    Anti-mitotic agents such as colchicine have been used to induce polyploidy in various plants. Here we examined the effects of different doses of colchicine on polyploidy induction in two cotton species (Gossypium herbaceum and Gossypium arboreum). The data reveal that the dose of colchicine, treatment duration, ...

  4. Multiple shoot regeneration of cotton ( Gossypium hirsutum L.) via ...

    African Journals Online (AJOL)

    Multiple shoot regeneration of cotton (Gossypium hirsutum L.) via shoot apex culture system. MM Bazargani, BES Tabatabaei, M Omidi. Abstract. Induction of multiple shoots of cotton (Gossypium hirsutum L.) plant in two commercial varieties (Sahel and Varamin) using shoot apex was done. Explants were isolated from 3 - 4 ...

  5. Distribution and Molecular Diversity of Arborescent Gossypium Species.

    Science.gov (United States)

    Mexico is a center of diversity of Gossypium. As currently circumscribed, arborescent Gossypium species (Section Erioxylum) are widely distributed in dry deciduous forests located from the central state of Sinaloa at the north of its range to the eastern state of Oaxaca in the south. However, extens...

  6. Assessment of cotton-seed ( Gossypium species) meal as ingredient ...

    African Journals Online (AJOL)

    The effect of feeding graded levels of cotton GossypiumSpp. seed meal as an inclusion in the diet of Clariasgariepinus juveniles for growth performance was analysed in comparison with the conventional commercial fish feed. Six experimental rations formulated were cotton-seed Gossypium spp. meal replaced fish meal at ...

  7. Biochemical characterization of embryogenic calli of Vanilla planifolia in response to two years of thidiazuron treatment.

    Science.gov (United States)

    Kodja, Hippolyte; Noirot, Michel; Khoyratty, Shahnoo S; Limbada, Hafsah; Verpoorte, Robert; Palama, Tony Lionel

    2015-11-01

    Vanilla planifolia embryogenic calli were cultured for two years on a medium containing thidiazuron (TDZ). Due to the presence of TDZ, these calli were under permanent chemical treatment and the differentiation of adventitious shoots from protocorm-like-bodies (PLBs) was blocked. When embryogenic calli were transferred onto a medium without TDZ, shoot organogenesis and plantlet regeneration occurred. To gain better knowledge about the biochemical and molecular processes involved in the morphoregulatory role of TDZ, hormonal and metabolomic analyses were performed. Our results indicate that in the presence of TDZ, embryogenic calli contained a high amount of abscisic acid (ABA) essentially metabolized into abscisic acid glucosyl ester (ABAGE) and phaseic acid (PA), which was the most abundant. When transferred onto a medium without TDZ, shoot regeneration and development take place in four stages that include: embryogenic calli growth, differentiation of PLBs from meristmatic cells zones (MCZ), shoot organogenesis from PLBs and the elongation of well-formed shoots. From a hormonal perspective, the significant reduction in ABA metabolism and its readjustment in the ABAGE pathway triggered PLBs formation. However, this first morphogenesis was stimulated by a strong reduction in IAA metabolism. The organogenesis of PLBs into shoots is associated with an increase in ABA catabolism and a gradual shift in cellular metabolism towards shoot differentiation. Thus, the initiation of the elongation process in shoots is correlated with an alteration in metabolite composition, including an increase in energy reserves (sucrose/starch) and a rapid decrease in alanine content. Our data highlighted the relationship between endogenous hormone signalling, carbohydrate metabolism and shoot organogenesis in Orchid plants. Copyright © 2015 Elsevier Masson SAS. All rights reserved.

  8. Grass defoliation affecting survival and growth of seedlings of ...

    African Journals Online (AJOL)

    Two experiments were conducted, one in the field and the other in the greenhouse, to investigate the effects of the intensity and frequency of grass defoliation on the survival and growth of Acacia karroo seedlings. In the greenhouse, seedlings growing with heavily clipped grasses had higher biomass production than those ...

  9. Defoliation effects of perennial grasses – continuing confusion | DL ...

    African Journals Online (AJOL)

    Although an adequate knowledge of growth patterns and defoliation effects in perennial grasses is a prerequisite for the rational use of veld and pastures for animal production, our knowledge of this subject is far from adequate. The results of various physiological and clipping studies on tropical and sub-tropical grasses are ...

  10. Effect of the intensity and phenophase of defoliation and water ...

    African Journals Online (AJOL)

    A field study was conducted with Acacia karroo plant to determine changes in relative photosynthetic rates, the extent of carbohydrate reserve depletion and the rate reserves take to recover, following defoliation by goats at different intensities and phenophases, at a "wet" and a "dry" site. The rate of photosynthesis of fully ...

  11. The influence of nitrogen and defoliation on production and water ...

    African Journals Online (AJOL)

    The objective of this study was to investigate the influence of different nitrogen fertiliser application levels in combination with different defoliation intervals on the dry matter (DM) production and water-use efficiency of ryegrass (Lolium multiflorum) cv. Midmar. In a field trial, four nitrogen levels (0, 150, 300 and 450kg N ha-1) ...

  12. The influence of defoliation and moisture on the tannin and ...

    African Journals Online (AJOL)

    To determine whether tannin and total polyphenol contents of Portulacaria afra change owing to damage, different trees were subjected to three intensities of defoliation, namely, none, fifty and ninety per cent. In addition, the influence of an improved water supply through irrigation was determined. Results showed an initial ...

  13. Research Note The impact of season, time of defoliation and ...

    African Journals Online (AJOL)

    ... 9:00, 12:00 and 15:00, respectively. It was concluded that dehydration of samples had the most significant impact on the concentration of mimosine followed by the time of defoliation and the season. Keywords: dihydroxypyridine; DHP; fodder trees; secondary compounds. African Journal of Range & Forage Science 2009, ...

  14. Influence by artificial defoliation and NPK fertilizer application on ...

    African Journals Online (AJOL)

    A field trial to determine the effect of artificial defoliation and NPK fertilizer application on growth and yield of okra was conducted in 2010 and 2011 at the Teaching and Research Farms of the Faculty of Agriculture, University of Benin, Benin City, Nigeria. Okra “Uselu Local” was sourced locally and subjected to four rates of ...

  15. Research Note The impact of season, time of defoliation and ...

    African Journals Online (AJOL)

    This study evaluated the variation of the concentration of mimosine in Leucaena forage with season, the time of defoliation and dehydration. Fresh samples were collected randomly from Leucaena regrowth and sorted into four types of samples (primordial tips, young leaves, mature leaves and edible twigs). The samples ...

  16. [Simultaneous determination of ethephon, thidiazuron, diuroN residues in cotton by using high performance liquid chromatography-tandem mass spectrometry].

    Science.gov (United States)

    Xie, Wen; Shi, Yingzhu; Hou, Jianbo; Huang, Chaoqun; Zhao, Dong; Pan, Lulu; Dong, Suozhuai

    2014-02-01

    A method for the determination of ethephon, thidiazuron and diuron in cotton samples has been developed by high performance liquid chromatography-tandem mass spectrometry (HPLC-MS/MS). The sample was extracted with methanol-water. The separation was carried out on a C8 column (150 mm x 4.6 mm, 5 microm) with methanol-water (6:4, v/v) as mobile phase at a flow rate of 0.4 mL/min, and the injection volume was 20 microL. Then the sample solution was analyzed by HPLC-MS/MS in negative ion mode with multiple reaction monitoring (MRM). There were one precursor/two product ion transitions for each pesticide. The results showed that the working curves were linear in the range of 0-10 microg/L for ethephon and thidiazuron, and 0-1 microg/L for diuron. The correlation coefficients (r) were all over 0. 999. The limits of quantitation (LOQ) of ethephon, diuron were 40 microg/kg, that of thidiazuron was 4 microg/kg. The average recoveries varied from 89.4% to 100.2% with the relative standard deviations (RSDs) of 5.7%-11.5% at three spiked levels (LOQ, 2LOQ and 4LOQ). The method is simple, rapid and accurate, and can meet the requirements of the domestic and international legislation. The method adapts to confirm the residues of ethephon, thidiazuron and diuron pesticides in cotton samples.

  17. Differential Effects of Thidiazuron on Production of Anticancer Phenolic Compounds in Callus Cultures of Fagonia indica.

    Science.gov (United States)

    Khan, Tariq; Abbasi, Bilal Haider; Khan, Mubarak Ali; Shinwari, Zabta Khan

    2016-04-01

    Fagonia indica, a very important anticancer plant, has been less explored for its in vitro potential. This is the first report on thidiazuron (TDZ)-mediated callogenesis and elicitation of commercially important phenolic compounds. Among the five different plant growth regulators tested, TDZ induced comparatively higher fresh biomass, 51.0 g/100 mL and 40.50 g/100 mL for stem and leaf explants, respectively, after 6 weeks of culture time. Maximum total phenolic content (202.8 μg gallic acid equivalent [GAE]/mL for stem-derived callus and 161.3 μg GAE/mL for leaf-derived callus) and total flavonoid content (191.03 μg quercetin equivalent [QE]/mL for stem-derived callus and 164.83 μg QE/mL for leaf-derived callus) were observed in the optimized callus cultures. The high-performance liquid chromatography (HPLC) data indicated higher amounts of commercially important anticancer secondary metabolites such as gallic acid (125.10 ± 5.01 μg/mL), myricetin (32.5 ± 2.05 μg/mL), caffeic acid (12.5 ± 0.52 μg/mL), catechin (9.4 ± 1.2 μg/mL), and apigenin (3.8 ± 0.45 μg/mL). Owing to the greater phenolic content, a better 2-2-diphenyl-1-picrylhydrazyl (DPPH) radical-scavenging activity (69.45 % for stem explant and 63.68 % for leaf explant) was observed in optimized calluses. The unusually higher biomass and the enhanced amount of phenolic compounds as a result of lower amounts of TDZ highlight the importance of this multipotent hormone as elicitor in callus cultures of F. indica.

  18. Thidiazuron Triggers Morphogenesis in Rosa canina L. Protocorm-like bodies by Changing Incipient Cell Fate

    Directory of Open Access Journals (Sweden)

    Kou eYaping

    2016-05-01

    Full Text Available Thidiazuron (N-phenyl-N'-1,2,3-thiadiazol-5-ylurea; TDZ is an artificial plant growth regulator that is widely used in plant tissue culture. Protocorm-like bodies (PLBs induced by TDZ serve as an efficient and rapid in vitro regeneration system in Rosa species. Despite this, the mechanism of PLB induction remains relatively unclear. TDZ, which can affect the level of endogenous auxins and cytokinins, converts the cell fate of rhizoid tips and triggers PLB formation and plantlet regeneration in Rosa canina L. In callus-rhizoids, which are rhizoids that co-develop from callus, auxin and a Z-type cytokinin accumulated after applying TDZ, and transcription of the auxin transporter gene RcPIN1 was repressed. The expression of RcARF4, RcRR1, RcCKX2, RcCKX3, and RcLOG1 increased in callus-rhizoids and rhizoid tips while the transcription of an auxin response factor (RcARF1 and auxin transport proteins (RcPIN2, RcPIN3 decreased in callus-rhizoids but increased in rhizoid tips. In situ hybridization of rhizoids showed that RcWUS and RcSERK1 were highly expressed in columella cells and root stem cells resulting in the conversion of cell fate into shoot apical meristems or embryogenic callus. In addition, transgenic XVE::RcWUS lines showed repressed RcWUS overexpression while RcWUS had no effect on PLB morphogenesis. Furthermore, higher expression of the root stem cell marker RcWOX5 and root stem cell maintenance regulator genes RcPLT1 and RcPLT2 indicated the presence of a dedifferentiation developmental pathway in the stem cell niche of rhizoids. Viewed together, our results indicate that different cells in rhizoid tips acquired regeneration competence after induction by TDZ. A novel developmental pathway containing different cell types during PLB formation was identified by analyzing the endogenous auxin and cytokinin content. This study also provides a deeper understanding of the mechanisms underlying in vitro regeneration in Rosa.

  19. Effects of time and intensity of defoliation on yield and yield components of corn

    Directory of Open Access Journals (Sweden)

    parisa mahmoodi

    2009-06-01

    Full Text Available In order to evaluate the effects of time (20, 40, 60 and 100 days after sowing and intensity of defoliation (0, 33, 66 and 100% on a corn cultivar ( three way cross 647, a complete randomized block design with split plot arrangement and three replications was conducted in Experimental Field of Faculty of Agriculture Ferdowsi University of Mashhad.The main plots were consisted of defoliation time and the sub plots were consisted of defoliation intensity. For this purpose leaves were defoliated at 33, 66, and 100% and at the end of experiment, different morphologic and physiologic criteria such as number of leaves per plent, total dry matter and plant components dry matter, seed yield and yield components and also harvest index were evaluated. Results indicated that defoliation at the early stage of crop growth (20 and 40 days and at the end of crop growth (100 days showed no effects on most of criteria measured. However at the middle of growth period, defoliation reduced these parameters. Intensity of defoliatin up to 66% had no effects, but 100% reduced all those parameters. Therefore, it appears that by defoliation up to more the 50% of plant leaves, plants could recover and appears as a normal plant, but with 100% defoliation this was not happened. Defoliation at early stages had no negative effects, because regrowth of leaves could have compensated for these type of damage. At the end of growing season, plant cycle was completed and so defoliation had no negative effects on growth and development, while at the middle stage (60 and 80 days the negative effect was due to the fact that plants could not recover completely from defoliation. Key words: Zea mays, times of defoliation, intensity of defoliation, yield.

  20. Effects of artificial defoliation on growth and biomass accumulation in short-rotation sweetgum (Liquidambar styraciflua) in North Carolina.

    Science.gov (United States)

    Jetton, Robert M; Robison, Daniel J

    2014-01-01

    Sweetgum, Liquidambar styraciflua L. (Hamamelidales: Hamamelidaceae), is a species of interest for short-rotation plantation forestry in the southeastern United States. Despite its high levels of resistance to many native insects and pathogens, the species is susceptible to generalist defoliators during outbreak epidemics. The objective of this field study was to evaluate the potential impact of defoliation on sweetgum growth and productivity within the context of an operational plantation. Over three growing seasons, trees were subjected to artificial defoliation treatments of various intensity (control = 0% defoliation; low intensity = 33% defoliation; moderate intensity = 67% defoliation; high intensity = 99% defoliation) and frequency (not defoliated; defoliated once in April of the first growing season; defoliated twice, once in April of the first growing season and again in April of the second growing season). The responses of stem height, stem diameter, stem volume, crown volume, total biomass accumulation, and branch growth were measured in November of each growing season. At the end of the first growing season, when trees had received single defoliations, significant reductions in all growth traits followed the most severe (99%) defoliation treatment only. After the second and third growing seasons, when trees had received one or two defoliations of varying intensity, stem diameter and volume and total tree biomass were reduced significantly by 67 and 99% defoliation, while reductions in stem height and crown volume followed the 99% treatment only. All growth traits other than crown volume were reduced significantly by two defoliations but not one defoliation. Results indicate that sweetgum is highly resilient to single defoliations of low, moderate, and high intensity. However, during the three-year period of the study, repeated high-intensity defoliation caused significant reductions in growth and productivity that could have lasting impacts on yield

  1. Evidence for Transient increase of rhizodeposition  following a severe defoliation of Plantago arenaria

    DEFF Research Database (Denmark)

    Henry, Frédéric; Madsen, Mette Vestergård; Christensen, Søren

    2007-01-01

    Plants are often grazed resulting in a sudden and significant removal of shoot tissue, which decreases photosynthesis and changes C allocation between within the plant. From results obtained in percolated sand it is possible to demonstrate an increase of rhizodeposition within few days after...... defoliation followed by a decrease of rhizodeposition. The aim of our study was to test if this pattern can be also observed for plants grown in soil. We grew Plantago arenaria in microcosms and defoliated half of them after 45 d. Half of the defoliated and non-defoliated microcosms were harvested 1.5 d......, and the other half 8.5 d, after defoliation. We observed an increase of microbial biomass 1.5 d after defoliation followed by a decrease assessed 8.5 d after the treatment. In parallel, soil soluble C and the metabolic quotient of the microbial biomass first decreased and then increased at the second harvest...

  2. Consequences of resource limitation for recovery from repeated defoliation in Eucalyptus globulus Labilladière.

    Science.gov (United States)

    Barry, Karen M; Quentin, Audrey; Eyles, Alieta; Pinkard, Elizabeth A

    2012-01-01

    Recovery following defoliation can be modified by co-occurring site resource limitations. The growth response of young Eucalyptus globulus saplings to two defoliation events was examined in an experimental plantation with combinations of low (-) or high (+) water (W) and nitrogen (N) resources. Artificial defoliation was applied at 3 and 9 months of age to remove ~40 and 55% of leaf area in the upper crown, respectively. At 18 months of age, height, stem diameter and leaf area were not significantly different between control and defoliated saplings, across all resource treatments. However, stem volume, bark volume and branch number were significantly increased in defoliated saplings, including a significant interaction with resource treatment. Total above-ground biomass of saplings in response to defoliation was significantly higher (almost double) than controls for the low water (N + W-) treatment only. Significantly increased foliar starch content (and a trend for increased soluble sugars) in the upper crown zone was found in the defoliated saplings of the N + W- treatment compared with the upper zone of control saplings. Foliar total non-structural carbohydrates were significantly correlated to stem biomass regardless of resource treatment or defoliation, and we suggest that foliar resources are most important for stem growth in E. globulus rather than stored carbon (C) from other tissues. After repeated defoliation and several months recovery, E. globulus saplings were generally not C limited in this study.

  3. Analysing Atmospheric Processes and Climatic Drivers of Tree Defoliation to Determine Forest Vulnerability to Climate Warming

    Directory of Open Access Journals (Sweden)

    Raúl Sánchez-Salguero

    2016-12-01

    Full Text Available Crown defoliation is extensively monitored across European forests within the International Co-operative Programme (ICP as a proxy of forest health. Climate warming and drought are assumed to be the major drivers of tree growth and crown defoliation, particularly in seasonally dry areas such as the Mediterranean Basin. Here we analyse how climate, drought, and atmospheric processes are related to defoliation time series of five oak and five pine species that are dominant across Spanish ICP monitoring forest plots. We found that warmer and drier conditions during April were linked to enhanced defoliation. Warm April conditions were also related to high values of the Atlantic Multi-decadal Oscillation (AMO, thereby indicating large-scale links between atmospheric processes, temperature, and defoliation patterns. The temperature-defoliation association was species-specific since some tree species from wet sites showed a weak association (e.g., Quercus robur L. whereas others from dry sites (e.g., Quercus ilex L. presented the strongest associations. The latter tree species could be considered vulnerable to heat stress in terms of leaf shedding. We also explored if defoliation was related to radial growth and found negative associations in relatively dry areas. Warmer and drier conditions linked to increasing AMO values are connected to the post-1990s rise of defoliation in Spanish ICP forest plots. Combined incorporation of defoliation and growth into mortality models can provide insights into assessments of forest vulnerability.

  4. The effect of frequency of defoliation on Themeda triandra in the ...

    African Journals Online (AJOL)

    Tufts of Themeda triandra were subjected to different frequencies of defoliation during a single season under irrigated and non-irrigated conditions. Frequent defoliation (> 5 times per year) severely reduced clipped yield on both moisture treatments. On irrigated treatments, root mass declined and shoot apex elevation was ...

  5. Assessment of MODIS NDVI time series data products for detecting forest defoliation by gypsy moth outbreaks

    Science.gov (United States)

    Joseph P. Spruce; Steven Sader; Robert E. Ryan; James Smoot; Philip Kuper; al. et.

    2011-01-01

    This paper discusses an assessment of Moderate Resolution Imaging Spectroradiometer (MODIS) time-series data products for detecting forest defoliation from European gypsy moth (Lymantria dispar). This paper describes an effort to aid the United States Department of Agriculture (USDA) Forest Service in developing and assessing MODIS-based gypsy moth defoliation...

  6. Effects of Basal Defoliation on Wine Aromas: A Meta-Analysis

    Directory of Open Access Journals (Sweden)

    Yu Wang

    2018-03-01

    Full Text Available Basal defoliation, as one of the most common viticulture management practices to modify fruit zone microclimates, has been widely applied aiming at improving wine quality. Wine aroma contributes greatly to wine quality, yet the effects of basal defoliation on wine aromas show discrepancies according to previous studies. This study is a meta-analysis performed to dissect the factors related to the influence of basal defoliation on volatile compounds in wine. Timing of basal defoliation plays an important role in the concentration of varietal aromas in wine. Pre-veraison defoliation induces an increase in β-damascenone and linalool as well as a reduction in 3-isobutyl-2-methoxypyrazine (IBMP. The effects of basal defoliation on certain volatile compounds relative to fermentation aromas in wine (1-hexanol, β-phenylethanol, 2-phenylethyl acetate, decanoic acid, and ethyl octanoate depend on grape maturity. There are also other factors, such as cultivar and climate conditions, that might be responsible for the effect of basal defoliation on wine aromas. The concentrations of isobutanol, isoamyl alcohol, hexanoic acid, and octanoic acid as well as ethyl isobutyrate, ethyl hexanoate, ethyl isovalerate, and ethyl decanoate in wine are not markedly affected by basal defoliation. Due to limited studies included in this meta-analysis, more trials are needed to confirm the current findings.

  7. Effects of defoliation on black currant ( Ribes nigrum l. ) infection by ...

    African Journals Online (AJOL)

    Field inoculation trials and laboratory studies were used to investigate the effects of defoliation stress on potted black currant plants and the infection by English and African isolates of Armillaria. Defoliation has varying effects on the carbohydrate, fatty acids and amino acids contents of roots. All isolates of Armillaria tested ...

  8. Responses of an Insect Folivore and Its Parastoids to Multiyear Experimental Defoliation of Aspen

    Science.gov (United States)

    Dylan Parry; Daniel A. Herms; William J. Mattson

    2003-01-01

    Foliage quality may decline in deciduous trees following defoliation, thus affecting the insect generation responsible for the herbivory (rapid induced resistance, RIR), or future generations (delayed induced resistance, DIR). During outbreaks, trees often suffer partial or complete defoliation for two or more successive years, yet most studies have examined induced...

  9. Proceedings: population dynamics, impacts, and integrated management of forest defoliating insects

    Science.gov (United States)

    M.L. McManus; A.M., eds. Liebhold

    1998-01-01

    This publication contains 52 research papers about the population ecology and management of forest insect defoliators. These papers were presented at a joint meeting of working parties S7.03.06, "Integrated Management of Forest Defoliating Insects", and S7.03.07, "Population dynamics of forest insects", of the International Union of Forestry...

  10. Effects of defoliation and drought on root food reserves in sugar maple seedlings

    Science.gov (United States)

    Johnson Parker; Johnson Parker

    1970-01-01

    The artificial defoliation of sugar maple (Acer. saccharum Marsh.) can cause a marked decline in root food reserves, especially starch, and an increase in the levels of the reducing sugars, fructose and glucose. Defoliation can also bring on the dieback-decline syndrome in sugar maples (Parker and Houston 1968). Two experiments designed to examine this question were...

  11. Defoliation reduces soil biota - and modifies stimulating effects of elevated CO2

    DEFF Research Database (Denmark)

    Dam, Marie; Christensen, Søren

    2015-01-01

    To understand the responses to external disturbance such as defoliation and possible feedback mechanisms at global change in terrestrial ecosystems, it is necessary to examine the extent and nature of effects on aboveground-belowground interactions. We studied a temperate heathland system subjected...... to experimental climate and atmospheric factors based on prognoses for year 2075 and further exposed to defoliation. By defoliating plants, we were able to study how global change modifies the interactions of the plant-soil system. Shoot production, root biomass, microbial biomass, and nematode abundance were...... assessed in the rhizosphere of manually defoliated patches of Deschampsia flexuosa in June in a full-factorial FACE experiment with the treatments: increased atmospheric CO2, increased nighttime temperatures, summer droughts, and all of their combinations. We found a negative effect of defoliation...

  12. Efeito de thidiazuron na indução e manutenção de calos de erva-baleeira (Cordia verbenacea L. Effects of thidiazuron on callus induction and maintenance of Cordia verbenacea L

    Directory of Open Access Journals (Sweden)

    Osmar Alves Lameira

    1997-03-01

    Full Text Available O trabalho teve como objetivo avaliar a influência do Thidiazuron (TDZ na formação e manutenção de calos de Cordia verbenacea. Segmentos caulinares com 3 a 4cm de comprimento provenientes de mudas cultivadas em casa de vegetação foram desinfestados em solução contendo hipoclorito de sódio comercial a 30% e duas gotas de detergente por 10 minutos, sendo 5 minutos em agitação. Posteriormente, foram excisados e inoculados com 5mm de tamanho em meio sólido a 0,6% de Murashige & Skoog (MURASHIGE & SKOOG, 1962 - MS, complementado com 0,22; 0,68: 2,04 e 6,l3uM de TDZ. A formação de calos ocorreu em todos os tratamentos com 10 a 15 dias de cultivo Os tratamentos que apresentaram o explante com a maior área coberta com calos, em média 75%, foram 2,04 e 6,13miM de TDZ. Somente nesses tratamentos os calos aumentaram de volume e mantiveram a coloração inicial quando transferidos para o meio fresco de cultura. Os tratamentos com menores concentrações de TDZ apresentaram explantes com 50% da área coberta com calos e quando transferidos para o meio fresco de cultura ocorreu a paralisação do crescimento com a posterior morte dos calos.The influence of thidiazuron on calius formation and maintenance of Corola verbenacea was evaluated. Stem segments with 3 to 4cm length were excisedfrom greenhouse plants and surface sterilized with 30% commercial sodium hypochiorite for 10 minutes. Explants were inoculated with 5mm on Murashige and Skoog (MVRASHIGE & SKOOG, 1962 - MSsolid médium (0.6% suppiemented with 0.22, 0.68, 2.04 and 6.13muM TDZ. Calius induction was observed 10 to 15 days after incubation. The media contaming, 2.04 and 6.13uM TDZ induced 75% expiam with calius. The calius when transferred to fresh culture médium exhibited active growth. The treatments containing lower concentration induced 50% expiam with caltus that when transferred to fresh culture médium, showed no development.

  13. Evaluation of IRS-1C LISS-3 satellite data for Norway spruce defoliation assessment

    Energy Technology Data Exchange (ETDEWEB)

    Falkenstroem, H.

    1999-02-01

    Satellite based remote sensing supported by air photo and field surveys, provide a means to area covering forest health assessment on a regional scale. Landsat TM data has been extensively used in studies of spruce and fir defoliation in Europe and North America. The temporal coverage of Landsat TM in combination with cloudiness however restrict the availability of data. In this study the LISS-3 sensor onboard the Indian Resource Satellite, IRS-1C, was evaluated for defoliation assessments in Norway spruce (Picea abies) in the central part of Sweden. The near infrared wavelength band proved to be best correlated with mean stand defoliation. After normalisation of satellite data for topographic conditions, the correlation coefficient increased from -0,19 to -0,83. Normalising satellite data for species composition did not improve the results though. The correction coefficients involved in the procedure were originally developed for Landsat TM, and proved to be inadequate for the LISS-3 data set. A thorough examination of the effects of species composition on LISS-3 data is needed to yield better results. The correlation between observed defoliation in the verification stands and predicted (based on the inverse regression function between corrected NIR values and defoliation in reference stands) was 0,70, despite a very limited range of defoliation in the verification set. IRS-1C LISS-3 is fully comparable to Landsat TM for spruce defoliation studies, although the results would probably not be significantly improved 49 refs, 7 figs, 10 tabs

  14. Defoliation of strawberry mother plants for the production of runner tips

    Directory of Open Access Journals (Sweden)

    Miriane Dal Picio

    2014-07-01

    Full Text Available The objective of this work was to determine the sink-source relationships and their effects on the number and growth of runner tips of 'Camino Real' strawberry stock plants. Three types of sources were evaluated: one defoliation at 96 days after planting (DAP, two defoliations at 50 and 96 DAP, and mother plants without defoliation. Four types of sink were accessed: runner tips collected weekly and monthly, four stolons with rooted runner tips in pots, and four freely-grown stolons. A completely randomized experimental design was used in a split-plot arrangement, with four replicates. The source types were placed in the plots, and sink types in the subplots. The number of runner tips, the crown diameter, and the dry matter mass were determined. Number and growth of tips were higher on plants without defoliation, and decreased 44.7% on twice-defoliated mother plants. The two-defoliation management did not reduce runner tip dry matter mass only on plants with rooted stolons, which produced runner tips 50% heavier. Defoliation of mother plants bearing rooting stolons can be used to reduce their growth, without reducing the emission and growth of runner tips.

  15. The mode of action of thidiazuron: auxins, indoleamines, and ion channels in the regeneration of Echinacea purpurea L.

    Science.gov (United States)

    Jones, Maxwell P A; Cao, Jin; O'Brien, Rob; Murch, Susan J; Saxena, Praveen K

    2007-09-01

    The biochemical mechanisms underlying thidiazuron (TDZ)-induced regeneration in plant cells have not been clearly elucidated. Exposure of leaf explants of Echinacea purpurea to a medium containing TDZ results in undifferentiated cell proliferation and differentiated growth as mixed shoot organogenesis and somatic embryogenesis. The current studies were undertaken to determine the potential roles of auxin, indoleamines, and ion signaling in the dedifferentiation and redifferentiation of plant cells. E. purpurea leaf explants were found to contain auxin and the related indoleamine neurotransmitters, melatonin, and serotonin. The levels of these endogenous indoleamines were increased by exposure to TDZ associated with the induction of regeneration. The auxin-transport inhibitor 2,3,5-triiodobenzoic acid and auxin action inhibitor, p-chlorophenoxyisobutyric acid decreased the TDZ-induced regeneration but increased concentrations of endogenous serotonin and melatonin. As well, inhibitors of calcium and sodium transport significantly reduced TDZ-induced morphogenesis while increasing endogenous indoleamine content. These data indicate that TDZ-induced regeneration is the manifestation of a metabolic cascade that includes an initial signaling event, accumulation, and transport of endogenous plant signals such as auxin and melatonin, a system of secondary messengers, and a concurrent stress response.

  16. Correlation of epiphyllous bud differentiation with foliar senescence in crassulacean succulent Kalanchoe pinnata as revealed by thidiazuron and ethrel application.

    Science.gov (United States)

    Jaiswal, Sarita; Sawhney, Sudhir

    2006-05-01

    Leaves of Kalanchoe pinnata have crenate margins with each notch bearing a dormant bud competent to develop into a healthy plantlet. Leaf detachment is a common signal for inducing two contrastingly different leaf-based processes, i.e. epiphyllous bud development into plantlet and foliar senescence. To investigate differentiation of bud and its correlation, if any, with foliar senescence, thidiazuron (TDZ), having cytokinin activity and ethrel (ETH), an ethylene releasing compound, were employed. The experimental system was comprised of marginal leaf discs, each harbouring an epiphyllous bud. Most of the growth characteristics of plantlet developing from the epiphyllous bud were significantly inhibited by TDZ but promoted by ETH. The two regulators modulated senescence in a manner different for leaf discs and plantlet leaves. Thus, TDZ caused a complete retention whereas ETH a complete loss of chlorophyll in the leaf discs. In contrast, the former resulted in a complete depletion of chlorophyll from the plantlet leaves producing an albino effect, while the latter reduced it by 50% only. In combined dispensation of the two regulators, the effect of TDZ was expressed in majority of responses studied. The results presented in this investigation clearly show that the foliar processes of epiphyllous bud differentiation and senescence are interlinked as TDZ that delayed senescence inhibited epiphyllous bud differentiation and ETH that hastened senescence promoted it. A working hypothesis to interpret responsiveness of the disc-bud composite on lines of a source-sink duo, has been proposed.

  17. Nutrients and defoliation increase soil carbon inputs in grassland.

    Science.gov (United States)

    Ziter, Carly; MacDougall, Andrew S

    2013-01-01

    Given the regulatory impact of resources and consumers on plant production, decomposition, and soil carbon sequestration, anthropogenic changes to nutrient inputs and grazing have likely transformed how grasslands process atmospheric CO2. The direction and magnitude of these changes, however, remain unclear in this system, whose soils contain -20% of the world's carbon pool. Nutrients stimulate production but can also increase tissue palatability and decomposition. Grazing variously affects tissue quality and quantity, decreasing, standing biomass, but potentially increasing leaf nutrient concentrations, root production, or investment in tissue defenses that slow litter decay. Here, we quantified individual and interactive impacts of nutrient addition and simulated grazing (mowing) on above- and belowground production, tissue quality, and soil carbon inputs in a western North American grassland with globally distributed agronomic species. Given that nutrients and grazing are often connected with increased root production and higher foliar tissue quality, we hypothesized that these treatments would combine to reduce inputs of recalcitrant-rich litter critical for C storage. This hypothesis was unsupported. Nutrients and defoliation combined to significantly increase belowground production but did not affect root tissue quality. There were no significant interactions between nutrients and defoliation for any measured response. Three years of nutrient addition increased root and shoot biomass by 37% and 23%, respectively, and had no impact on decomposition, resulting in a -15% increase in soil organic matter and soil carbon. Defoliation triggered a significant burst of short-lived lignin-rich roots, presumably a compensatory response to foliar loss, which increased root litter inputs by 33%. The majority of root and shoot responses were positively correlated, with aboveground biomass a reasonable proxy for whole plant responses. The exceptions were decomposition, with

  18. Association mapping of resistance to Verticillium wilt in Gossypium ...

    African Journals Online (AJOL)

    Verticillium wilt is a major disease affecting the growth of cotton. For screening the resistant genes, 320 Gossypium hirsutum germplasms were evaluated in Verticillium nursery, and association mapping was used to detect the markers associated with the Verticillium wilt resistance. 106 microsatellite marker primer pairs ...

  19. KUTUN : a morphogenetic model for cotton (Gossypium hirsitum L.)

    NARCIS (Netherlands)

    Mutsaers, H.J.W.

    1982-01-01

    A whole crop model for growth and development of cotton ( Gossypium hirsutum L.) is presented. The model is based on previous extensive studies on plant morphogenesis, growth of fruits and canopy photosynthesis. The crop model basically is a carbohydrate budget, but all

  20. The Nutritive Potentials Of Cotton ( Gossypium barbadense ) Leaves ...

    African Journals Online (AJOL)

    Sample of cotton plants (Gossypium barbadense) leaves were analyzed for phytochemical contents, heavy metals, trace elements, proximate composition and toxic/ anti nutritional components. On screening of the leaf extract it was found to contain alkaloids such as quinoline, indole and morphine, but tropane was absent.

  1. Ethyl ester purpurine-18 from Gossypium mustelinum (Malvaceae)

    International Nuclear Information System (INIS)

    Silva, Tania Maria Sarmento; Camara, Celso Amorim; Barbosa-Filho, Jose Maria; Giulietti, Ana Maria

    2010-01-01

    The phaeophorbide ethyl ester named Purpurine-18 and the flavonoids quercetin and kaempferol were obtained by chromatographic procedures from the chloroform fraction of aerial parts of Gossypium mustelinum. The structure of these compound was determined by NMR, IR and mass spectra data analysis. This is the first occurrence of this compound in Angiosperm. (author)

  2. Effect of nitrates on embryo induction efficiency in cotton (Gossypium ...

    African Journals Online (AJOL)

    Fred

    Cotton (Gossypium hirsutum L.) cv Coker-312 callus culture was assessed in terms of its usefulness as a system for investigating the effect of nitrates from different chemical compounds of nitrogen on embryo induction percentage in calli as the plant growth and cell differentiation mainly based on nitrogen. Both sources and ...

  3. Polyploidization effect in two diploid cotton (Gossypium herbaceum ...

    African Journals Online (AJOL)

    SERVER

    2008-01-18

    Jan 18, 2008 ... pomegranate (Punica granatum). Plant Cell Tissue Organ Cult., 75: 241-246. Sheidai M, Alishah O, Vojdani P (1996). Karyological studies in. Gossypium herbaceum L. cultivars of Iran. Cytologia 61: 365-374. Singh RJ (1993). The handling of chromosomes. Plant cytogenetics,. CRC Press. London, pp.

  4. Decadal-scale ecosystem memory reveals interactive effects of drought and insect defoliation on boreal forest productivity

    Science.gov (United States)

    Itter, M.; D'Orangeville, L.; Dawson, A.; Kneeshaw, D.; Finley, A. O.

    2017-12-01

    Drought and insect defoliation have lasting impacts on the dynamics of the boreal forest. Impacts are expected to worsen under global climate change as hotter, drier conditions forecast for much of the boreal increase the frequency and severity of drought and defoliation events. Contemporary ecological theory predicts physiological feedbacks in tree responses to drought and defoliation amplify impacts potentially causing large-scale productivity losses and forest mortality. Quantifying the interactive impacts of drought and insect defoliation on regional forest health is difficult given delayed and persistent responses to disturbance events. We developed a Bayesian hierarchical model to estimate forest growth responses to interactions between drought and insect defoliation by species and size class. Delayed and persistent responses to past drought and defoliation were quantified using empirical memory functions allowing for improved detection of interactions. The model was applied to tree-ring data from stands in Western (Alberta) and Eastern (Québec) regions of the Canadian boreal forest with different species compositions, disturbance regimes, and regional climates. Western stands experience chronic water deficit and forest tent caterpillar (FTC) defoliation; Eastern stands experience irregular water deficit and spruce budworm (SBW) defoliation. Ecosystem memory to past water deficit peaked in the year previous to growth and decayed to zero within 5 (West) to 8 (East) years; memory to past defoliation ranged from 8 (West) to 12 (East) years. The drier regional climate and faster FTC defoliation dynamics (compared to SBW) likely contribute to shorter ecosystem memory in the West. Drought and defoliation had the largest negative impact on large-diameter, host tree growth. Surprisingly, a positive interaction was observed between drought and defoliation for large-diameter, non-host trees likely due to reduced stand-level competition for water. Results highlight the

  5. INFLUÊNCIA DO THIDIAZURON E DA INOCULAÇÃO COM Azospirillum brasilense NO CRESCIMENTO E PRODUTIVIDADE DO ARROZ DE TERRAS ALTAS / INFLUENCE OF THIDIAZURON AND INOCULATION WITH Azospirillum brasilense IN THE GROWTH AND PRODUCTIVITY OF HIGHLAND RICE

    Directory of Open Access Journals (Sweden)

    L. M. Garé

    2017-12-01

    Full Text Available A inoculação com bactérias do gênero Azospirillum pode contribuir com o fornecimento de nitrogênio (N e com o crescimento das plantas, pois esses microrganismos são também promotores de crescimento. Por outro lado a aplicação nas doses e épocas adequadas do regulador vegetal de efeito citocinínico thidiazuron (TDZ pode vir a beneficiar a produtividade de grãos. Dessa maneira, o objetivo do trabalho foi avaliar o efeito de doses de TDZ sobre a produtividade do arroz, na presença e ausência da inoculação foliar com Azospirillum brasilense. Foi utilizada a cultivar ANa 5015, no delineamento experimental de blocos casualizados em esquema fatorial 4 x 2, sendo quatro doses de TDZ (0,0; 0,5; 1,0 e 1,5g ha-1 aplicadas por ocasião do perfilhamento, 30 DAE, e da aplicação de Azospirillum brasilense (presença ou ausência em dose fixa aos 20 DAE. Verificou-se que a cultivar ANa 5015 não se mostrou responsiva para a inoculação foliar com Azospirillum brasilense na dose de 200 mL ha-1. Para as doses de TDZ aplicadas via foliar, houve uma variação significativa na altura de plantas, cuja dose de 0,41 g ha-1 resultou na altura máxima de 1,11 m. Não houve efeito das doses de TDZ na produtividade, massa de 100 grãos, número de panículas por m², grãos por panícula e massa hectolítrica.

  6. Ethyl ester purpurine-18 from Gossypium mustelinum (Malvaceae);Feoforbideo (etoxi-purpurina-18) isolado de Gossypium mustelinum (Malvaceae)

    Energy Technology Data Exchange (ETDEWEB)

    Silva, Tania Maria Sarmento; Camara, Celso Amorim, E-mail: taniasarmento@dq.ufrpe.b [Universidade Federal de Pernambuco (UFPE), Recife, PE (Brazil). Dept. de Quimica; Barbosa-Filho, Jose Maria [Universidade Federal da Paraiba (UFPB), Joao Pessoa, PB (Brazil). Lab. de Tecnologia Farmaceutica; Giulietti, Ana Maria [Universidade Estadual de Feira de Santana, BA (Brazil). Dept. de Ciencias Biologicas

    2010-07-01

    The phaeophorbide ethyl ester named Purpurine-18 and the flavonoids quercetin and kaempferol were obtained by chromatographic procedures from the chloroform fraction of aerial parts of Gossypium mustelinum. The structure of these compound was determined by NMR, IR and mass spectra data analysis. This is the first occurrence of this compound in Angiosperm. (author)

  7. Distinct physiological responses underlie defoliation tolerance in African lawn and bunch grasses

    NARCIS (Netherlands)

    Anderson, T.M.; Kumordzi, B.B.; Fokkema, W.; Valls Fox, H.; Olff, H.

    Premise of research. African grass communities are dominated by two distinct functional types: tall, caespitose bunch grasses and short, spreading lawn grasses. Functional type coexistence has been explained by differences in defoliation tolerance, because lawn grasses occur in intensively grazed

  8. The Virgin River Tamarisk Defoliation by Diorhabda carinulata: It's Effects on Evapotranspiration Rates and Groundwater Consumption

    Science.gov (United States)

    Sueki, S.; Healey, J. M.; Acharya, K.

    2013-12-01

    Saltcedar (tamarisk; Tamarix spp) has become the most widespread invasive plant species in the western United States. Waterways and their corridors have evolved into mono-species stands of saltcedar. Chemical and mechanical methods of tamarisk eradication have been partially effective and prove to be expensive and cause irrepressible damage to natural resources. In the late 1960s, biological control program began in order to reduce the risk of damaging native plants. In 2001, Diorhabda elongate (leaf beetles) was released for open field tests followed by other releases in several locations in the western United States. One of the successful releases occurred in St. George, UT along the Virgin River in 2006. The last few years has seen establishment of large scale populations in the lower Virgin River. Eddy covariance (EC) tower including groundwater monitoring well was set up along the Virgin River near Mesquite, NV in 2010 to monitor effects of tamarisk defoliation on evapotranspiration (ET). Initial 2010 data (pre-beetle) established a baseline for characterization of tamarisk ET and groundwater consumption prior to defoliation of tamarisk. The beetles arrived at the site in late 2010 and established a healthy population at the growing season of 2011. 2010 data compared to the episodic herbivore events, observed at the site in 2011 and 2012, clearly show the direct impact of tamarisk defoliation. The results show that the post-defoliation ET values along with magnitude of diurnal fluctuations, found in the water level record, decreased compared to the pre-defoliation values. However, magnitude of the effects of defoliation seemed to be dependent on growth stage of tamarisk at the time of defoliation. Also, the defoliation periods are short lived as tamarisk quickly recovered and establish new growth. In 2012, the defoliation occurred twice since tamarisk re-foliated quickly after the first defoliation by late summer before beetles started overwintering

  9. The use of non-lethal defoliation to minimize the foliar Cs-uptake by vine

    International Nuclear Information System (INIS)

    Carini, F.; Montruccoli, M.; Anguissola-Scotti, I.; Silva, S.

    1994-01-01

    The chemical non-lethal defoliation of fruit trees might be used to minimize the translocation of radionuclides from the leaves to the fruits and to the internal ligneous tissues, reducing their redistribution in next harvest. The current paper describes a study on vine - a Mediteranian arboreous specie of high economical value. The leaf-fruit translocation of radiocaesium has been analyzed from different points of view, in particular, the possibility of reducing the foliar uptake of such radionuclide by means of a nonlethal defoliation. Vines grown in pots have been directly contaminated in two different years by sprinkling a carrier free solution of 134 Cs on leaves. Grapes have been covered during sprinkling to avoid their direct contamination. Other vines have been defoliated after contamination to evaluate the influence of leaf removal on the radiocaesium translocation to the fruits. The radiocaesium concentration has been determined in grapes at the ripening stage in the must. The radiocaesium interception measured on removed leaves is about 30% of the sprinkled activity. The radioactivity of covered grapes is with 20% lower than uncovered ones. Such a lower activity is likely ascribable only to leaf-fruit translocation without direct contamination of the grapes. The translocation factor expressed as percentage of fruit activity compared to the total intercepted one is about four times lower when the leaf removal treatment is affected just after the contamination. Grapes of plants contaminated a year before have a 134 Cs residual activity about 17 times lower than plants contaminated in the same year. When the vines have been contaminated and defoliated the year before, the residual activity of grapes is about 70 times lower. The ratio between defoliated and non-defoliated plants is still 1:4. Radioactivity of the must is five times lower for defoliated vines than for non-defoliated ones. (author)

  10. Leaf-cutting ant attack in initial pine plantations and growth of defoliated plants

    Directory of Open Access Journals (Sweden)

    Mariane Aparecida Nickele

    2012-07-01

    Full Text Available The objective of this work was to evaluate the natural attack by Acromyrmex crassispinus in initial Pinus taeda plantations without control measures against ants, as well as the effect of defoliation in seedlings of P. taeda. Evaluations of the attack of leaf-cutting ants on P. taeda plantations were done monthly in the first six months, then 9 and 12 months after planting. The percentages of plants that were naturally attacked by ants were registered. The effect of defoliation was evaluated by artificial defoliation, simulating the natural patterns of attack by A. crassispinus on P. taeda seedlings. The natural attack of A. crassispinus was greater during the first months after planting, being more intense in the first 30 days. Artificial defoliation indicated that there were no significant losses in diameter and height in plants with less than 75% defoliation. However, there were significant losses in diameter and height in plants with 100% defoliation, independently of the cut of the apical meristem, and also plant death. The control of leaf-cutting ants in P. taeda plantings, in which A. crassispinus is the most frequent leaf-cutting ant, should be intense only at the beginning of planting, since the most severe attacks occur during this time.

  11. Resource allocation in an annual herb: Effects of light, mycorrhizal fungi, and defoliation

    Science.gov (United States)

    Aguilar-Chama, Ana; Guevara, Roger

    2016-02-01

    Concurrent interactions and the availability of resources (e.g., light) affect the cost/benefit balance during mutualistic and antagonistic interactions, as well as plant resource allocation patterns. Mycorrhizal interactions and herbivory concur in most plants, where mycorrhizae can enhance the uptake of soil nutrients by plants as well as consuming a large fraction of the plant's carbon, and defoliation usually reduces light interception and photosynthesis, thereby causing direct losses to the hosts of mycorrhizal fungi. Both types of interactions affect the carbon budget of their host plants and thus we predict that the relative costs of herbivory and mycorrhizal colonization will increase when photosynthesis is reduced, for instance in light limited environments. We conducted a greenhouse experiment using Datura stramonium to investigate the effects of defoliation and mycorrhizal inoculation on the resource allocation patterns in two different light environments. Defoliated plants overcompensated in terms of leaf mass in both light environments, but total seed mass per fruit was negatively affected by defoliation in both light environments. Mycorrhizal inoculation had a positive effect on vegetative growth and the leaf nitrogen content, but defoliation negates the benefit of mycorrhizal interactions in terms of the leaf nitrogen content. In general, D. stramonium compensated for the relative costs of concurrent mycorrhizal interactions and defoliation; plants that lacked both interactions exhibited the same performance as plants with both types of interactions.

  12. Modeling forest defoliation using simulated BRDF and assessing its effect on reflectance and sensor reaching radiance

    Science.gov (United States)

    Rengarajan, Rajagopalan; Schott, John R.

    2016-09-01

    Remote sensing techniques such as change detection are widely used for mapping and monitoring forest cover to detect the declining health and vigor of forests. These techniques rely on the assumption that the biophysical variation in the forest introduces a corresponding variation in its reflectance. The biophysical variations are assessed by foresters, but these assessment techniques are expensive and cannot be performed frequently to identify a specific level of change in the forest, for example, infection due to gypsy moths that results in forest defoliation. Further, the interaction of atmosphere, sensor characteristics, and phenology that are inherent in the remotely sensed images makes it difficult to separate biophysical changes from observational effects. We have addressed these limitations by developing a method to model the spectral reflectance properties of forests with varying degrees of defoliation using the Digital Image and Remote Sensing Image Generation (DIRSIG) tool. This paper discusses the in-canopy radiative approach and the impact of defoliation on the reflectance and radiance observed by sensors such as Landsat. The results indicate that the relative variation in forest reflectance between a non-defoliated and a 30% defoliated deciduous forest can be as high as 10% in the NIR spectral band. A function can be fit to predict the level of defoliation from the relative variation in radiance. The modeling and analysis techniques can be extended to assess the impact of atmospheric factors and sensor characteristics relative to the biophysical changes as well as for assessing other biophysical variables in forests.

  13. Near-Real-Time Monitoring of Insect Defoliation Using Landsat Time Series

    Directory of Open Access Journals (Sweden)

    Valerie J. Pasquarella

    2017-07-01

    Full Text Available Introduced insects and pathogens impact millions of acres of forested land in the United States each year, and large-scale monitoring efforts are essential for tracking the spread of outbreaks and quantifying the extent of damage. However, monitoring the impacts of defoliating insects presents a significant challenge due to the ephemeral nature of defoliation events. Using the 2016 gypsy moth (Lymantria dispar outbreak in Southern New England as a case study, we present a new approach for near-real-time defoliation monitoring using synthetic images produced from Landsat time series. By comparing predicted and observed images, we assessed changes in vegetation condition multiple times over the course of an outbreak. Initial measures can be made as imagery becomes available, and season-integrated products provide a wall-to-wall assessment of potential defoliation at 30 m resolution. Qualitative and quantitative comparisons suggest our Landsat Time Series (LTS products improve identification of defoliation events relative to existing products and provide a repeatable metric of change in condition. Our synthetic-image approach is an important step toward using the full temporal potential of the Landsat archive for operational monitoring of forest health over large extents, and provides an important new tool for understanding spatial and temporal dynamics of insect defoliators.

  14. Impact of Zeatin and Thidiazuron on Phenols and Flavonoids Accumulation in Callus Cultures of Gardenia (Gardenia jasminoides).

    Science.gov (United States)

    Gabr, Ahmed Mohamed Magdy; Arafa, Nermeen Mohamed; El-Ashry, Amal Abd El-Latif; El-Bahr, Mohamed Kamal

    2017-01-01

    Gardenia (Gardenia jasminoides) has many pharmacological actions such as anti-inflammatory, antioxidant and fibrolytic activities and cytotoxic effects, etc. This study was conducted to recognize the effect of zeatin and thidiazuron (TDZ) on callus proliferation, total phenolic content, total flavonoids and DPPH scavenging activity of gardenia callus cultures. Calli were cultured on Murashige and Skoog (MS) medium supplement with different concentrations (2, 4 or 6 mg L-1) of zeatin or TDZ individually as well as combination of 2 mg L-1 zeatin+4 mg L-1 TDZ. Cultures contained 4 mg L-1 TDZ gave the highest callus fresh weight followed by those contained 2 mg L-1 zeatin then that cultured on 4 mg L-1 zeatin. Data reported as Mean±Standard Deviation (SD). Data were subjected to one-way analysis of variance (pdetermined through DPPH radical scavenging activity. Callus cultured on 4 mg L-1 TDZ showed the highest antioxidant activity then those cultured on 4 mg L-1 zeatin. The HPLC analysis for phenolic acids showed that chlorogenic acid, rosmarinic acid and cinnamic reached their highest contents with callus cultured on 4 mg L-1 TDZ (123.24, 322.14 and 278.22 μg g-1, respectively). Regarding flavonoids and using HPLC analysis, rutin, apigenin-7-glucoside and kaempferol were detected. Callus cultured with 4 mg L-1 TDZ gave the highest rutin and kaempferol contents (287.76 and 10.38 μg g-1, respectively). However, apigenin-7-glucoside was detected with high content (129.86 μg g-1) in callus culture with 4 mg L-1 Zeatin. The HPLC analysis recommended that TDZ is more effective in accumulation of individual phenolic and flavonoid than Zeatin. The present study provided a useful system for further study on in vitro culture of G. jasminoides as alternative and new source for important secondary products.

  15. Short and mid-term effects of artificial defoliation on the growth of euramerican poplar (Populus × canadensis clone I-214 in poplar stands in relation to the intensity and seasonal timing of defoliation.

    Directory of Open Access Journals (Sweden)

    Allegro G

    2017-08-01

    Full Text Available The impact of artificial defoliations on the growth of euramerican poplar (Populus × canadensis clone I-214 was investigated in three field assays. Young poplar trees (1st-3rd cultivation year were subjected to 25%, 50%, 75% and 100% defoliation either in the early or in the late growing season (or in both periods, and their growth was measured in the same year and during the following 2-3 years. Only trees treated to 75% and 100% defoliation exhibited a significant growth decrease compared to control trees: the diametric growth of early defoliated trees was reduced up to 20-40% in the year of defoliation, whereas trees defoliated at the same rates late in the season, or defoliated twice in a single year, suffered the heaviest damage, showing a growth loss up to 50% in the year following the defoliation events. In the latter cases, a delayed sprouting at spring and the death of branchlets were observed. A financial analysis showed that the economic damage caused by the highest defoliation rates, mainly when occurring late in the season, definitely exceeds the cost of treatments, thus suggesting the adoption of appropriate control strategies.

  16. Rapid evolutionary divergence of diploid and allotetraploid Gossypium mitochondrial genomes.

    Science.gov (United States)

    Chen, Zhiwen; Nie, Hushuai; Wang, Yumei; Pei, Haili; Li, Shuangshuang; Zhang, Lida; Hua, Jinping

    2017-11-13

    Cotton (Gossypium spp.) is commonly grouped into eight diploid genomic groups and an allotetraploid genomic group, AD. The mitochondrial genomes supply new information to understand both the evolution process and the mechanism of cytoplasmic male sterility. Based on previously released mitochondrial genomes of G. hirsutum (AD 1 ), G. barbadense (AD 2 ), G. raimondii (D 5 ) and G. arboreum (A 2 ), together with data of six other mitochondrial genomes, to elucidate the evolution and diversity of mitochondrial genomes within Gossypium. Six Gossypium mitochondrial genomes, including three diploid species from D and three allotetraploid species from AD genome groups (G. thurberi D 1 , G. davidsonii D 3-d and G. trilobum D 8 ; G. tomentosum AD 3 , G. mustelinum AD 4 and G. darwinii AD 5 ), were assembled as the single circular molecules of lengths about 644 kb in diploid species and 677 kb in allotetraploid species, respectively. The genomic structures of mitochondrial in D group species were identical but differed from the mitogenome of G. arboreum (A 2 ), as well as from the mitogenomes of five species of the AD group. There mainly existed four or six large repeats in the mitogenomes of the A + AD or D group species, respectively. These variations in repeat sequences caused the major inversions and translocations within the mitochondrial genome. The mitochondrial genome complexity in Gossypium presented eight unique segments in D group species, three specific fragments in A + AD group species and a large segment (more than 11 kb) in diploid species. These insertions or deletions were most probably generated from crossovers between repetitive or homologous regions. Unlike the highly variable genome structure, evolutionary distance of mitochondrial genes was 1/6th the frequency of that in chloroplast genes of Gossypium. RNA editing events were conserved in cotton mitochondrial genes. We confirmed two near full length of the integration of the mitochondrial

  17. Effect of thidiazuron and indole-butyric acid in the in vitro propagation of two varieties of strawberry (Oso Grande and Sweet Charlie from foliar sections

    Directory of Open Access Journals (Sweden)

    Pillco-Tancara Hilda Corina

    2017-08-01

    Full Text Available Strawberry farmers indicate that yields are low compared to other countries. This effect is due to the fact that they plant seedlings that come from stolons since the strawberries are propagated asexual. This con-ventional form of reproduction has disadvantages such as: decreased yield, loss of fruit quality. An alter-native to solve this problem is micropropagation. The present research evaluated the in vitro behavior of two varieties of strawberry (Oso Grande and Sweet Charlie from leaf segments with different degrees of maturation (juvenile and adult in two periods of introduction. To induce in vitro propagation, the culture media were supplemented with growth regulators, using two concentrations 4.54 and 9.08 μM of thidiazuron with the combination of three concentrations of 0, 0.98 and 2.5 μM of acid Indolebutyric acid. Explants of leaf segments showing juvenile tissues (May came to form buds. The same did not occur with those that came from adult tissue (June, so it can be noted that those that came from juvenile tissue had a better response in vitro. It was determined that the combination of 9.08 μM thidiazuron and 0.98 μM indolbutyric acid was the most suitable for the in vitro propagation of leaf sections of strawberry leaves in both varieties, since in this medium more formation was obtained Of cell aggregates, for the formation of outbreaks compared to the other treatments.

  18. Purification and biosynthesis of cottonseed (Gossypium hirsutum L.) catalase.

    OpenAIRE

    Kunce, C M; Trelease, R N; Turley, R B

    1988-01-01

    As part of our research on peroxisome biogenesis, catalase was purified from cotyledons of dark-grown cotton (Gossypium hirsutum L.) seedlings and monospecific antibodies were raised in rabbits. Purified catalase appeared as three distinct electrophoretic forms in non-denaturing gels and as a single protein band (with a subunit Mr of 57,000) on silver-stained SDS/polyacrylamide gels. Western blots of crude extracts and isolated peroxisomes from cotton revealed one immunoreactive polypeptide w...

  19. Evolution and Stress Responses of Gossypium hirsutum SWEET Genes.

    Science.gov (United States)

    Li, Wei; Ren, Zhongying; Wang, Zhenyu; Sun, Kuan; Pei, Xiaoyu; Liu, Yangai; He, Kunlun; Zhang, Fei; Song, Chengxiang; Zhou, Xiaojian; Zhang, Wensheng; Ma, Xiongfeng; Yang, Daigang

    2018-03-08

    The SWEET (sugars will eventually be exported transporters) proteins are sugar efflux transporters containing the MtN3_saliva domain, which affects plant development as well as responses to biotic and abiotic stresses. These proteins have not been functionally characterized in the tetraploid cotton, Gossypium hirsutum , which is a widely cultivated cotton species. In this study, we comprehensively analyzed the cotton SWEET gene family. A total of 55 putative G. hirsutum SWEET genes were identified. The GhSWEET genes were classified into four clades based on a phylogenetic analysis and on the examination of gene structural features. Moreover, chromosomal localization and an analysis of homologous genes in Gossypium arboreum , Gossypium raimondii , and G. hirsutum suggested that a whole-genome duplication, several tandem duplications, and a polyploidy event contributed to the expansion of the cotton SWEET gene family, especially in Clade III and IV. Analyses of cis -acting regulatory elements in the promoter regions, expression profiles, and artificial selection revealed that the GhSWEET genes were likely involved in cotton developmental processes and responses to diverse stresses. These findings may clarify the evolution of G. hirsutum SWEET gene family and may provide a foundation for future functional studies of SWEET proteins regarding cotton development and responses to abiotic stresses.

  20. Gossypolhemiquinone, a dimeric sesquiterpenoid identified in cotton (Gossypium).

    Science.gov (United States)

    Stipanovic, Robert; Puckhaber, Lorraine; Frelichowski, James; Esquivel, Jesus; Westbrook, John; O'Neil, Mike; Bell, Alois; Dowd, Michael; Hake, Kater; Duke, Sara

    2016-02-01

    The report that the cotton leaf perforator, Bucculatrix thurberiella, is one of the few insect herbivores to attack Gossypium thurberi prompted an investigation of the terpenoids present in the leaves of this wild species of cotton. Members of Gossypium produce subepidermal pigment glands in their leaves that contain the dimeric sesquiterpenoid gossypol as well as other biosynthetically related terpenoids. In addition to gossypol, a previously unknown dimeric sesquiterpenoid, gossypolhemiquinone (GHQ), was identified in trace amounts in G. thurberi, a member of the D genome. Other members of the D genome of Gossypium were subsequently found to contain this compound, but GHQ was not detected in commercial cotton cultivars. When fed to Helicoverpa zea in an artificial diet, GHQ delayed days-to-pupation, reduced pupal weights, and survival to adulthood to a lesser or equal extent than gossypol in comparison to the control diet. However, GHQ had a synergistic effect on survival and days-to-pupation when combined with gossypol at the highest dosage tested (0.18%; 15.5:84.5 GHQ:gossypol). Because gossypol exhibits anti-cancer activity, GHQ was also evaluated for its anti-cancer activity against the National Cancer Institute's 60-Human Tumor Cell Line Screen. Significant inhibitory activity against most of these cell lines was not observed, but the results may offer some promise against leukemia cancer cell lines. Published by Elsevier Ltd.

  1. Interactive effects of water supply and defoliation on photosynthesis, plant water status and growth of Eucalyptus globulus Labill.

    Science.gov (United States)

    Quentin, A G; O'Grady, A P; Beadle, C L; Mohammed, C; Pinkard, E A

    2012-08-01

    Increased climatic variability, including extended periods of drought stress, may compromise on the health of forest ecosystems. The effects of defoliating pests on plantations may also impact on forest productivity. Interactions between climate signals and pest activity are poorly understood. In this study, we examined the combined effects of reduced water availability and defoliation on maximum photosynthetic rate (A(sat)), stomatal conductance (g(s)), plant water status and growth of Eucalyptus globulus Labill. Field-grown plants were subjected to two water-availability regimes, rain-fed (W-) and irrigated (W+). In the summer of the second year of growth, leaves from 75% of crown length removed from trees in both watering treatments and physiological responses within the canopies were examined. We hypothesized that defoliation would result in improved plant water status providing a mechanistic insight into leaf- and canopy-scale gas-exchange responses. Defoliated trees in the W+ treatment exhibited higher A(sat) and g(s) compared with non-defoliated trees, but these responses were not observed in the W- treatment. In contrast, at the whole-plant scale, maximum rates of transpiration (E(max)) and canopy conductance (G(Cmax)) and soil-to-leaf hydraulic conductance (K(P)) increased in both treatments following defoliation. As a result, plant water status was unaffected by defoliation and trees in the defoliated treatments exhibited homeostasis in this respect. Whole-plant soil-to-leaf hydraulic conductance was strongly correlated with leaf scale g(s) and A(sat) following the defoliation, providing a mechanistic insight into compensatory up-regulation of photosynthesis. Above-ground height and diameter growth were unaffected by defoliation in both water availability treatments, suggesting that plants use a range of responses to compensate for the impacts of defoliation.

  2. Monitoring of defoliation in mixed-aged Eucalyptus plantations using Landsat 5-TM

    Science.gov (United States)

    Somers, B.; Verbesselt, J.; Ampe, E. M.; Sims, N.; Verstraeten, W. W.; Coppin, P.

    2010-05-01

    The amount of foliage is one of the primary physiological controls of plant functioning, which ultimately influences plant survival and growth. Repeated severe defoliation events have been linked to reduced growth rates and tree mortality in Eucalyptus forests throughout the world. Satellite remote sensing provides a cost-effective alternative to traditional ground-based assessment of forest health. In this study the potential of spectral mixture analysis for defoliation monitoring is evaluated. A novel spectral unmixing technique, referred to as weighted Multiple Endmember Spectral Mixture Analysis (wMESMA), was developed and successfully applied to Landsat 5 TM data acquired over a Eucalyptus globulus (Labill.) plantation in southern Australia. This technique combines an iterative mixture analysis cycle allowing endmembers to vary on a per pixel basis (MESMA) and a weighting algorithm that prioritizes wavebands based on their robustness against endmember variability. Spectral mixture analysis provides an estimate of the physically interpretable canopy cover, which is not necessarily correlated with defoliation in mixed aged plantations due to natural variation in canopy cover as stands age. Results show that considerable variability in the degree of defoliation exists as well as in stand age amongst sites. In this study significantly improvement of the link between spectral unmixing and defoliation is observed by the inclusion of an age correction algorithm for the multispectral (R² no age correction = 0.55 vs. R² age correction = 0.73).

  3. Efeitos do thidiazuron e do ácido giberélico nas características dos cachos e bagos da uva de mesa 'Vênus' na região noroeste do estado de São Paulo Effects of thidiazuron and gibberellic acid on cluster and berry characteristics of 'Vênus' table grape in the Northwestern São Paulo State

    Directory of Open Access Journals (Sweden)

    Renato Vasconcelos Botelho

    2003-04-01

    Full Text Available O uso de reguladores de crescimento está amplamente difundido no cultivo da videira para a melhoria da qualidade das uvas (Vitis vinifera L., visando principalmente ao aumento em tamanho e ao pegamento dos bagos, à descompactação dos cachos e à eliminação de sementes. Nesse contexto, um experimento foi conduzido em vinhedo do cultivar Vênus localizado em Urânia-SP, região noroeste de São Paulo, por dois ciclos consecutivos. Para os tratamentos, utilizam-se thidiazuron a 5 ou 10 mg.L-1 e ácido giberélico a 30 mg.L-1, combinados ou não. Foram avaliadas as seguintes variáveis: comprimento, largura e massa dos cachos e bagos; massa dos engaços; número de bagos; número de sementes-traço; e teor de sólidos solúveis totais, acidez total titulável e relação SST/ATT do mosto. As aplicações de ácido giberélico aumentaram a massa, o comprimento, a largura e o número dos bagos, e reduziram o número de sementes-traço de uvas 'Vênus'. A associação de thidiazuron com ácido giberélico potencializou o efeito desse regulador de crescimento no aumento do pegamento dos frutos e na redução do número de sementes-traço. Aplicações de thidiazuron a 10 mg.L-1, associado ou não ao ácido giberélico, atrasaram a maturação da uva, diminuindo o teor de sólidos solúveis totais e a relação SST/ATT e reduziram a acidez total titulável do mosto. Aplicações de reguladores de crescimento também aumentaram a massa dos cachos e dos engaços.The use of growth regulators is widely diffused in vine crops to improve grapes quality (Vitis vinifera L., aiming mainly the increase of fruit size and set, loosening clusters, and elimination of seeds. In this context, a trial was carried out in a vineyard located at Urânia-SP, Northwestern São Paulo State, during two seasons. It was used thidiazuron at 5 or 10mg.L-1 and gibberellic acid at 30mg.L-1, combined or not. The following variables were evaluated: weight, length and width of

  4. Simulated western spruce budworm defoliation reduces torching and crowning potential: A sensitivity analysis using a physics-based fire model

    Science.gov (United States)

    Gregory M. Cohn; Russell A. Parsons; Emily K. Heyerdahl; Daniel G. Gavin; Aquila Flower

    2014-01-01

    The widespread, native defoliator western spruce budworm (Choristoneura occidentalis Freeman) reduces canopy fuels, which might affect the potential for surface fires to torch (ignite the crowns of individual trees) or crown (spread between tree crowns). However, the effects of defoliation on fire behaviour are poorly understood. We used a physics-based fire model to...

  5. Consequences of repeated defoliation on belowground bud banks of Carex brevicuspis (Cyperaceae in the Dongting Lake wetlands, China

    Directory of Open Access Journals (Sweden)

    Xinsheng Chen

    2016-07-01

    Full Text Available Despite the predominant role of bud banks in the regeneration of clonal macrophyte populations, few studies have examined the way in which clonal macrophytes adjust the demographic features of bud banks to regulate population dynamics in response to defoliation in wetlands. We investigated the density and composition of bud banks under repeated defoliation in the wetland sedge Carex brevicuspis C. B. Clarke in the Dongting Lake wetlands, China. The density and biomass of rhizome buds and shoots did not decrease significantly in response to repeated defoliation over two consecutive years. The composition of bud banks, which consisted of long and short rhizome buds, also did not change significantly in response to repeated defoliation. Nevertheless, the ramet height and the shoot, root, and rhizome mass of C. brevicuspis declined significantly under repeated defoliation. Our findings suggest that bud banks are a conservative reproductive strategy that enables C. brevicuspis to tolerate a certain amount of defoliation. The maintenance of large bud banks after repeated defoliation may enable C. brevicuspis populations to regenerate and persist in disturbed habitats. However, bud bank density of C. brevicuspis might decline in the long term because the amount of carbon stored in rhizome buds and plants is reduced by frequent defoliation.

  6. Thidiazuron-enhanced biosynthesis and antimicrobial efficacy of silver nanoparticles via improving phytochemical reducing potential in callus culture of Linum usitatissimum L.

    Directory of Open Access Journals (Sweden)

    Anjum S

    2016-02-01

    Full Text Available Sumaira Anjum, Bilal Haider AbbasiDepartment of Biotechnology, Quaid-i-Azam University, Islamabad, PakistanAbstract: Green synthesis of silver nanoparticles (AgNPs by using plants is an emerging class of nanobiotechnology. It revolutionizes all domains of medical sciences by synthesizing chemical-free AgNPs for various biomedical applications. In this report, AgNPs were successfully synthesized by using whole plant extract (WPE and thidiazuron-induced callus extract (CE of Linum usitatissimum. The phytochemical analysis revealed that the total phenolic and flavonoid contents were higher in CE than that in WPE. Ultraviolet-visible spectroscopy of synthesized AgNPs showed a characteristic surface plasmon band in the range of 410–426 nm. Bioreduction of CE-mediated AgNPs was completed in a shorter time than that of WPE-mediated AgNPs. Scanning electron microscopy showed that both types of synthesized AgNPs were spherical in shape, but CE-mediated AgNPs were smaller in size (19–24 nm and more scattered in distribution than that of WPE-mediated AgNPs (49–54 nm. X-ray diffraction analysis confirmed crystalline nature (face-centered cubic of both types of AgNPs. Fourier-transform infrared spectroscopy revealed that the polyphenols and flavonoids were mainly responsible for reduction and capping of synthesized AgNPs. Energy dispersive X-ray analysis further confirmed the successful synthesis of AgNPs. Moreover, the synthesized AgNPs were found to be stable over months with no change in the surface plasmon bands. More importantly, CE-mediated AgNPs displayed significantly higher bactericidal activity against multiple drug-resistant human pathogens than WPE-mediated AgNPs. The present work highlighted the potent role of thidiazuron in in vitro-derived cultures for enhanced biosynthesis of chemical-free AgNPs, which can be used as nanomedicines in many biomedical applications.Keywords: silver nanoparticles, Linum usitatissimum L., in vitro

  7. Tamarisk (Tamarix spp.) water fluxes before, during and after episodic defoliation by the saltcedar leaf beetle

    Science.gov (United States)

    Hultine, K.R.; Nagler, P.L.; Dennison, P.E.; Bush, S.E.; Ehleringer, J.R.

    2009-01-01

    Tamarisk (Tamarix) species are among the most successful and economically costly plant invaders in the western United States, in part due to its potential to remove large amounts of water from shallow aquifers. Accordingly, local, state and federal agencies have released a new biological control - the saltcedar leaf beetle (Diorhabda elongata) along many watersheds in the western United States to reduce the spread of tamarisk. The beetle defoliates tamarisk for much of the growing season resulting in potentially large seasonal declines in productivity, fitness, and water loss from tamarisk stands. We measured sap flux density (Js) using heat dissipation sensors to investigate water use patterns of tamarisk before, during and after a single, six week beetle-induced defoliation event in southeastern, Utah, USA. Granier-style probes were installed on 20 dominant trees from May through September 2008, a period that covers almost the entire growing season. As the beetle emerged from dormancy in mid-June, daytime and nighttime Js measurably increased for approximately two weeks before declining to less than 20% of predicted values (predicted by modeling Js with atmospheric vapor pressure deficit in May and June before defoliation). Tamarisk trees in mid-August produced new leaves and Js returned to pre-defoliation levels. Total Js, summed over the duration of the study was 13% lower than predicted values. These data suggest that defoliation results in only small changes in seasonal water loss from tamarisk stands. Current research is focusing on long-term ecohydrological impacts of tamarisk defoliation over multiple growing seasons.

  8. Mapping Historic Gypsy Moth Defoliation with MODIS Satellite Data: Implications for Forest Threat Early Warning System

    Science.gov (United States)

    Spurce, Joseph P.; Hargrove, William; Ryan, Robert E.; Smooth, James C.; Prados, Don; McKellip, Rodney; Sader, Steven A.; Gasser, Jerry; May, George

    2008-01-01

    This viewgraph presentation reviews a project, the goal of which is to study the potential of MODIS data for monitoring historic gypsy moth defoliation. A NASA/USDA Forest Service (USFS) partnership was formed to perform the study. NASA is helping USFS to implement satellite data products into its emerging Forest Threat Early Warning System. The latter system is being developed by the USFS Eastern and Western Forest Threat Assessment Centers. The USFS Forest Threat Centers want to use MODIS time series data for regional monitoring of forest damage (e.g., defoliation) preferably in near real time. The study's methodology is described, and the results of the study are shown.

  9. The influence of KJ, CuSO4, and Mg(ClO32 on defoliation and subsequent frost resistance and growth of apple trees in nurseries

    Directory of Open Access Journals (Sweden)

    Alina Basak

    2015-06-01

    Full Text Available In most cases 2-year-old trees of 3 cultivars responded better to defoliants than 1-year-old ones. Spraying with defoliants on September 25 - 28 was more effective than spraying 10 days earlier. There was also more bark injury in the autumn, and more frost injury on trees defoliated on the ealier date. Mg(ClO32 seemed to be the best defoliant but markedly decreased the frost resistance of McIntosh trees. Defoliants investigated may be applied to limited extent to 2-year-old trees but not to 1-year-old ones.

  10. Defoliation and gender effects on fitness components in three congeneric and sympatric understorey palms

    NARCIS (Netherlands)

    Hernández-Barrios, J.C.; Anten, N.P.R.; Ackerly, D.D.

    2012-01-01

    1.Rain forest understorey perennial plants can be frequently exposed to leaf area losses induced by herbivory or physical damage from falling canopy debris. In dioecious species, tolerance to defoliation may differ between genders (e.g. females may suffer more than males), but this topic has so far

  11. Defoliation effects on seed dispersal and seedling recruitment in a tropical rain forest understorey palm

    NARCIS (Netherlands)

    Lent, van J.; Hernandez-Barrios, J.C.; Anten, N.P.R.; Martinez-Ramos, M.

    2014-01-01

    1. Assessing the demographic effects of leaf area losses in perennial plants is important to determine population resilience to natural and anthropogenic disturbances. Yet, while impacts of defoliation on vital rates of adult plants have been well documented, consequences for seed dispersal and

  12. Predicting abundance and productivity of blueberry plants under insect defoliation in Alaska

    Science.gov (United States)

    Robin Reich; Nathan Lojewski; John Lundquist; Vanessa Bravo

    2018-01-01

    Unprecedented outbreaks of defoliating insects severely damaged blueberry crops near Port Graham on the Kenai Peninsula in Alaska from 2008-2012. The Native people in this region rely heavily on gathered blueberries and other foods for sustenance and nourishment. Influences of topography and stand structure on blueberry abundance and fruiting were examined and used to...

  13. An insect countermeasure impacts plant physiology: midrib vein cutting, defoliation and leaf photosynthesis.

    Science.gov (United States)

    Delaney, Kevin J; Higley, Leon G

    2006-07-01

    One type of specialised herbivory receiving little study even though its importance has frequently been mentioned is vein cutting. We examined how injury to a leaf's midrib vein impairs gas exchange, whether impairment occurs downstream or upstream from injury, duration of impairment, compared the severity of midrib injury with non-midrib defoliation, and modelled how these two leaf injuries affect whole-leaf photosynthesis. Leaf gas exchange response to midrib injury was measured in five Asclepiadaceae (milkweed), one Apocynaceae (dogbane), one Polygonaceae and one Fabaceae species, which have been observed or reported to have midrib vein cutting injury in their habitats. Midrib vein injury impaired several leaf gas exchange parameters, but only downstream (distal) from the injury location. The degree of gas exchange impairment from midrib injury was usually more severe than from manually imposed and actual insect defoliation (non-midrib), where partial recovery occurred after 28 d in one milkweed species. Non-midrib tissue defoliation reduced whole-leaf photosynthetic activity mostly by removing photosynthetically active tissue, while midrib injury was most severe as the injury location came closer to the petiole. Midrib vein cutting has been suggested to have evolved as a countermeasure to deactivate induced leaf latex or cardenolide defences of milkweeds and dogbanes, yet vein cutting effects on leaf physiology seem more severe than the non-midrib defoliation the defences evolved to deter.

  14. Effect of different defoliants and application times on the yield and ...

    African Journals Online (AJOL)

    USER

    2010-04-05

    Apr 5, 2010 ... 1Department of Crop Science, Faculty of Agriculture, Harran University, 63040 Sanliurfa-Turkey. ... Mechanized harvesting of cotton requires the application of harvest-facilitating. *Corresponding author. E-mail: osmancopur@gmail.com. Phone: (90) 4143183690, Fax: (90) 4143183882. defoliants ...

  15. Abundance and distribution of rhizomorphs of Armillaria spp. in defoliated mixed oak stands in western Maryland

    Science.gov (United States)

    Mark J. Twery; Garland N. Mason; Philip M. Wargo; Kurt W. Gottschalk

    1990-01-01

    The abundance and distribution of rhizomorphs of Armillaria spp. in the soil were quantified in undisturbed stands and in stands defoliated 1 and 5 years previously by insects. Although the species of Armillaria was not determined, similar mixed oak forests in south central Pennsylvania contain North American biological species VII...

  16. Defoliation patterns and tillering dynamics in Italian ryegrass under different herbage allowances

    Directory of Open Access Journals (Sweden)

    Larissa Arnhold Graminho

    2014-09-01

    Full Text Available This work was carried out in order to generate information on the tillering process and to contribute for the understanding of the defoliation process on Italian ryegrass (Lolium multiflorum Lam. grazed by lambs under different herbage allowances: 6, 8 and12 kg  of dry matter  per100 kg of animal live weight  per day. The grazing method was intermittent. The experimental design was completely randomized following a repeated measure arrangement, with three treatments and two area replications. The intensity of defoliation is greater at 6 and 9% herbage allowances. The defoliation interval is higher at 12% herbage allowance, intermediate at 9% and lower at 6%. The rates of tiller emergence, survival and death, stability index the tiller population are similar for the different herbage allowances and differ according to the phenological stage of ryegrass. Structural changes caused by canopy management with low herbage allowance and/or due to the advance in developmental stage of ryegrass alter defoliation strategies, with more intense and frequent grazing.

  17. Short-term response of burnt grassland to defoliation in a semi-arid ...

    African Journals Online (AJOL)

    The impact of defoliation on the productivity and soil temperature of burnt grassland (head and back fires) was investigated over the short term (one and two growing seasons after burning). Head fires had greater flame height and rate of spread than back fires. However, back fires were more intense and exceeded 100°C at ...

  18. Nitrogen reserves, spring regrowth and winter survival of field-grown alfalfa (Medicago sativa) defoliated in the autumn.

    Science.gov (United States)

    Dhont, Catherine; Castonguay, Yves; Nadeau, Paul; Bélanger, Gilles; Drapeau, Raynald; Laberge, Serge; Avice, Jean-Christophe; Chalifour, François-P

    2006-01-01

    The objective of the study was to characterize variations in proline, arginine, histidine, vegetative storage proteins, and cold-inducible gene expression in overwintering roots of field-grown alfalfa, in response to autumn defoliation, and in relation to spring regrowth and winter survival. Field trials, established in 1996 in eastern Canada, consisted of two alfalfa cultivars ('AC Caribou' and 'WL 225') defoliated in 1997 and 1998 either only twice during the summer or three times with the third defoliation taken 400, 500 or 600 growing degree days (basis 5 degrees C) after the second summer defoliation. The root accumulation of proline, arginine, histidine and soluble proteins of 32, 19 and 15 kDa, characterized as alfalfa vegetative storage proteins, was reduced the following spring by an early autumn defoliation at 400 or 500 growing degree days in both cultivars; the 600-growing-degree-days defoliation treatment had less or no effect. Transcript levels of the cold-inducible gene msaCIA, encoding a glycine-rich protein, were markedly reduced by autumn defoliation in 'WL 225', but remained unaffected in the more winter-hardy cultivar 'AC Caribou'. The expression of another cold-inducible gene, the dehydrin homologue msaCIG, was not consistently affected by autumn defoliation. Principal component analyses, including components of root organic reserves at the onset of winter, along with yield and plant density in the following spring, revealed that (a) amino acids and soluble proteins are positively related to the vigour of spring regrowth but poorly related to winter survival and (b) winter survival, as indicated by plant density in the spring, is associated with higher concentrations of cryoprotective sugars in alfalfa roots the previous autumn. An untimely autumn defoliation of alfalfa reduces root accumulation of specific N reserves such as proline, arginine, histidine and vegetative storage proteins that are positively related to the vigour of spring

  19. Detection of tamarisk defoliation by the northern tamarisk beetle based on multitemporal Landsat 5 thematic mapper imagery

    Science.gov (United States)

    Meng, Ran; Dennison, Philip E.; Jamison, Levi R.; van Riper, Charles; Nager, Pamela; Hultine, Kevin R.; Bean, Dan W.; Dudley, Tom

    2012-01-01

    The spread of tamarisk (Tamarix spp., also known as saltcedar) is a significant ecological disturbance in western North America and has long been targeted for control, leading to the importation of the northern tamarisk beetle (Diorhabda carinulata) as a biological control agent. Following its initial release along the Colorado River near Moab, Utah in 2004, the beetle has successfully established and defoliated tamarisk across much of the upper Colorado River Basin. However, the spatial distribution and seasonal timing of defoliation are complex and difficult to quantify over large areas. To address this challenge, we tested and compared two remote sensing approaches to mapping tamarisk defoliation: Disturbance Index (DI) and a decision tree method called Random Forest (RF). Based on multitemporal Landsat 5 TM imagery for 2006-2010, changes in DI and defoliation probability from RF were calculated to detect tamarisk defoliation along the banks of Green, Colorado, Dolores and San Juan rivers within the Colorado Plateau area. Defoliation mapping accuracy was assessed based on field surveys partitioned into 10 km sections of river and on regions of interest created for continuous riparian vegetation. The DI method detected 3711 ha of defoliated area in 2007, 7350 ha in 2008, 10,457 ha in 2009 and 5898 ha in 2010. The RF method detected much smaller areas of defoliation but proved to have higher accuracy, as demonstrated by accuracy assessment and sensitivity analysis, with 784 ha in 2007, 960 ha in 2008, 934 ha in 2009, and 1008 ha in 2010. Results indicate that remote sensing approaches are likely to be useful for studying spatiotemporal patterns of tamarisk defoliation as the tamarisk leaf beetle spreads throughout the western United States.

  20. Xylem traits, leaf longevity and growth phenology predict growth and mortality response to defoliation in northern temperate forests.

    Science.gov (United States)

    Foster, Jane R

    2017-09-01

    Defoliation outbreaks are biological disturbances that alter tree growth and mortality in temperate forests. Trees respond to defoliation in many ways; some recover rapidly, while others decline gradually or die. Functional traits such as xylem anatomy, growth phenology or non-structural carbohydrate (NSC) storage could explain these responses, but idiosyncratic measures used by defoliation studies have frustrated efforts to generalize among species. Here, I test for functional differences with published growth and mortality data from 37 studies, including 24 tree species and 11 defoliators from North America and Eurasia. I synthesized data into standardized variables suitable for numerical models and used linear mixed-effects models to test the hypotheses that responses to defoliation vary among species and functional groups. Standardized data show that defoliation responses vary in shape and degree. Growth decreased linearly or curvilinearly, least in ring-porous Quercus and deciduous conifers (by 10-40% per 100% defoliation), whereas growth of diffuse-porous hardwoods and evergreen conifers declined by 40-100%. Mortality increased exponentially with defoliation, most rapidly for evergreen conifers, then diffuse-porous, then ring-porous species and deciduous conifers (Larix). Goodness-of-fit for functional-group models was strong (R2c = 0.61-0.88), if lower than species-specific mixed-models (R2c = 0.77-0.93), providing useful alternatives when species data are lacking. These responses are consistent with functional differences in leaf longevity, wood growth phenology and NSC storage. When defoliator activity lags behind wood-growth, either because xylem-growth precedes budburst (Quercus) or defoliator activity peaks later (sawflies on Larix), impacts on annual wood-growth will always be lower. Wood-growth phenology of diffuse-porous species and evergreen conifers coincides with defoliation and responds more drastically, and lower axial NSC storage makes them

  1. Characterization of conserved circular RNA in polyploid Gossypium species and their ancestors.

    Science.gov (United States)

    Zhao, Ting; Wang, Luyao; Li, Sai; Xu, Min; Guan, Xueying; Zhou, Baoliang

    2017-11-01

    Circular RNA (circRNA) is a regulatory class of long, noncoding RNA found in both plant and animal kingdoms. The profile and characterization of circRNA in cotton species remains to be explored. Here, using 24 rRNA-depleted RNA-seq libraries of putative diploid progenitors of Gossypium spp., Gossypium arboreum and Gossypium raimondii, their interspecies hybrid (F 1 ) and allotetraploid Gossypium hirsutum, 1041, 1478, 1311, and 499 circRNAs were identified in each cotton species, respectively. A prevalence of 23 exon-circRNAs contain noncanonical GT/AG signals, and only ~ 10% of exon-circRNA is associated with reverse complementary intronic sequences. This result implies that plants employ a method of circRNA splicing distinct from that of animals. In addition, 432 circRNAs are stably expressed in multiple cotton species. © 2017 Federation of European Biochemical Societies.

  2. GhNAC18 , a novel cotton ( Gossypium hirsutum L.) NAC gene, is ...

    African Journals Online (AJOL)

    GhNAC18, a novel cotton (Gossypium hirsutum L.) NAC gene, is involved in leaf senescence and diverse stress responses. Ondati Evans, Lingling Dou, Yaning Guo, Chaoyou Pang, Hengling Wei, Meizhen Song, Shuli Fan, Shuxun Yu ...

  3. Impact of grape cluster defoliation on TDN potential in cool climate Riesling wines

    Directory of Open Access Journals (Sweden)

    Schüttler Armin

    2015-01-01

    Full Text Available Many cool climate grape vine growing regions are and will be affected by the global climate change. It is likely that increasing temperatures, as well as changing precipitation pattern will impact the wines’ composition and wine styles. In the last decades the sensory concept of German Riesling wines was considered to represent fresh and fruity notes. However, aged wines of this variety are characterized by petrol like aroma, which is not appreciated in modern Riesling wines. The C13-norisoprenoid 1,1,6-trimethyl-1,2-dihydronaphthalene (TDN is considered to be the marker compound for this undesired sensory impression. The biogenesis of this compound is impacted by grape vine growth conditions. Wines made from Riesling grapes grown in warmer climates have higher concentrations of TDN. Therefore “TDN management” will be one of the most challenging tasks in viticulture in Riesling growing regions in general and particularly in cool climate regions. Two approaches considered are the canopy management of the grape vines as well as an appropriate selection of yeast strain for alcoholic fermentation. Therefore, the aim of this project was to study the impact of grape zone defoliation on potential TDN concentrations in grapes, must and finished wines under cool climate conditions, in example of regional conditions of the landmark Hessische Bergstraße, in com- bination with the usage of two commercially available yeast strains during alcoholic fermentation. The experiment consisted of four treatments in a balanced incomplete block design, grape zone defoliation at berry set on the eastern side of the canopy, grape zone defoliation at berry set on eastern and western side of the canopy, grape zone defoliation at veraison on eastern and western side of the canopy, and a non-defoliated treatment. The treatments and repetitions were harvested separately, pressed, and then fermented with two different commercial Saccharomyces cerevisiae strains. Grape

  4. Defoliation in ‘Pinotage’ during the harvests 2014/15 and 2015/16 in Dom Pedrito-RS

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    Hamm B.L.

    2016-01-01

    Full Text Available The objective of this study was to evaluate the effect on must from defoliation in ‘Pinotage’ in a property in the region Dom Pedrito, conducted in espalier and from East / West direction. The work was performed by the Nucleus of Study, Research and Extension in Oenology (NEPE2; in 2014/2015 and 2015/2016 harvests. The treatments were: T1 – control; T2 – Defoliation in thenorth; T3 – Defoliation in the south and; T4 – Defoliation South and North. The response variables were analyzed by infrared spectrometry fourier transform (FTIR; these analyzes in the must were: total soluble solids (TSS in ∘Brix, pH, potassium and gluconic acid. The experimental design was a randomized block design with four replications and 20 plants per plot. The results were submitted to analysis of variance (F test and multiple comparison of averages by Tukey test at 5% probability. TSS is kept equal in the 2014/15 crop, but in the 2015/16 season were different and the treatment T4 (Defoliation North and South; significantly higher, followed by treatment T3 (Defoliation to the south.

  5. Genome-wide identification of mitogen-activated protein kinase gene family in Gossypium raimondii and the function of their corresponding orthologs in tetraploid cultivated cotton.

    Science.gov (United States)

    Zhang, Xueying; Wang, Liman; Xu, Xiaoyang; Cai, Caiping; Guo, Wangzhen

    2014-12-10

    Mitogen-activated protein kinase (MAPK) cascades play a crucial role in plant growth and development as well as biotic and abiotic stress responses. Knowledge about the MAPK gene family in cotton is limited, and systematic investigation of MAPK family proteins has not been reported. By performing a bioinformatics homology search, we identified 28 putative MAPK genes in the Gossypium raimondii genome. These MAPK members were anchored onto 11 chromosomes in G. raimondii, with uneven distribution. Phylogenetic analysis showed that the MAPK candidates could be classified into the four known A, B, C and D groups, with more MAPKs containing the TEY phosphorylation site (18 members) than the TDY motif (10 members). Furthermore, 21 cDNA sequences of MAPKs with complete open reading frames (ORFs) were identified in G. hirsutum via PCR-based approaches, including 13 novel MAPKs and eight with homologs reported previously in tetraploid cotton. The expression patterns of 23 MAPK genes reveal their important roles in diverse functions in cotton, in both various developmental stages of vegetative and reproductive growth and in the stress response. Using a reverse genetics approach based on tobacco rattle virus-induced gene silencing (TRV-VIGS), we further verified that MPK9, MPK13 and MPK25 confer resistance to defoliating isolates of Verticillium dahliae in cotton. Silencing of MPK9, MPK13 and MPK25 can significantly enhance cotton susceptibility to this pathogen. This study presents a comprehensive identification of 28 mitogen-activated protein kinase genes in G. raimondii. Their phylogenetic relationships, transcript expression patterns and responses to various stressors were verified. This study provides the first systematic analysis of MAPKs in cotton, improving our understanding of defense responses in general and laying the foundation for future crop improvement using MAPKs.

  6. Comparative transmission genetics of introgressed chromatin in Gossypium (cotton) polyploids.

    Science.gov (United States)

    Waghmare, Vijay N; Rong, Junkang; Rogers, Carl J; Bowers, John E; Chee, Peng W; Gannaway, John R; Katageri, Ishwarappa; Paterson, Andrew H

    2016-04-01

    Introgression is widely acknowledged as a potential source of valuable genetic variation, and growing effort is being invested in analysis of interspecific crosses conferring transgressive variation. Experimental backcross populations provide an opportunity to study transmission genetics following interspecific hybridization, identifying opportunities and constraints to introgressive crop improvement. The evolutionary consequences of introgression have been addressed at the theoretical level, however, issues related to levels and patterns of introgression among (plant) species remain inadequately explored, including such factors as polyploidization, subgenome interaction inhabiting a common nucleus, and the genomic distribution and linkage relationships of introgressant alleles. We analyze introgression into the polyploid Gossypium hirsutum (upland cotton) from its sister G. tomentosum and compare the level and pattern with that of G. barbadense representing a different clade tracing to the same polyploidization. Across the genome, recurrent backcrossing to Gossypium hirsutum yielded only one-third of the expected average frequency of the G. tomentosum allele, although one unusual region showed preferential introgression. Although a similar rate of introgression is found in the two subgenomes of polyploid (AtDt) G. hirsutum, a preponderance of multilocus interactions were largely within the Dt subgenome. Skewed G. tomentosum chromatin transmission is polymorphic among two elite G. hirsutum genotypes, which suggests that genetic background may profoundly affect introgression of particular chromosomal regions. Only limited correspondence is found between G. hirsutum chromosomal regions that are intolerant to introgression from the two species, G. barbadense and G. tomentosum, concentrated near possible inversion polymorphisms. Complex transmission of introgressed chromatin highlights the challenges to utilization of exotic germplasm in crop improvement. © 2016

  7. IMPACT OF MONOCROTOPHOS AND NEEM OIL MIXTURE ON DEFOLIATOR MANGMENT IN GROUNDNUT

    Directory of Open Access Journals (Sweden)

    K SAHAYARAJ

    2006-12-01

    Full Text Available The integrated effect of intercropping, a synthetic pesticide (monocrotopas (M and neem based biopesticide (neem oil - 2% (NO on three-groundnut defoliators damage and also the groundnut production was studied. The monocrotopas and neem oil combination was found to be very effective in reducing the defoliator infestation. Defoliator’s incidence was signifi cantly higher in untreated plots, resulting in signifi cantly lower yield (1539.03 Kg h-1. The groundnut yield was increased (2011.18 Kg h-1 when monocrotophos and neem oil mixture was applied than monocrotophos (1877.77 Kg h-1 and control categories. The estimated avoidable groundnut and black gram yield loss were lower in monocrotopas.

  8. TWIG BLIGHT AND DEFOLIATION CAUSED BY Colletotrichum horii IN PERSIMMONS IN BRAZIL

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    LOUISE LARISSA MAY DE MIO

    2015-03-01

    Full Text Available Persimmon anthracnose has been a great concern to Brazilian producers. This study aimed to identify and characterized the causal species from Brazilian persimmons byassessing morphological and molecular characteristics and pathogenicity tests. Five fungal isolatesobtained from diseased twigs and fruits were identified as Colletotrichum horii, based on morphologicalcharacteristics and nucleotide sequences of ITS region. Inoculation tests revealed that the fungal isolates caused necrotic spots followed by defoliation of leaves, blight of twigs and buds of potted persimmon plants.

  9. The influence of nitrogen and defoliation on the nitrogen content of ...

    African Journals Online (AJOL)

    The response of the nitrogen content in ryegrass (Lolium multiflorum cv. Midmar) to a variation in applied nitrogen (0kg N ha-1, 150kg N ha-1, 300kg N ha-1 and 450kg N ha-1) and defoliation intervals (every 2, 4, 6 and 8 weeks, as well as twice a season) was determined. In a field trial, the four nitrogen levels were ...

  10. Simulation of defoliation caused by Black Sigatoka in the yield and quality of banana 'Nanica ' fruits

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    Juliana Domingues Lima

    Full Text Available ABSTRACT: Defoliation caused by Black Sigatoka in yield and quality of banana 'Nanica' was stimulated in this study. A completely randomized 2x8 factorial design with six repetitions was used, in which period of bunch formation and number of leaves at flowering were established as factors. Plants for defoliation were selected on 04/05/2013 (Period 1, and on 07/01/2014 (Period 2. Six to to 13 leaves remained per plant by removing those with more than 50% of blade with injury or senescence. More appropriate climatic conditions before and after flowering, promoted greater mass accumulation in the bunch in Period 2. The increased number of leaves at flowering increased the length of the fruit and the mass of 4th hand, as well as the bunch mass and postharvest period. Defoliation is suggested only for non-functional leaves as well as the maintenance of at least 10 leaves per plant, independent of the period of bunch formation.

  11. Cotton fiber cell walls of Gossypium hirsutum and Gossypium barbadense have differences related to loosely-bound xyloglucan.

    Science.gov (United States)

    Avci, Utku; Pattathil, Sivakumar; Singh, Bir; Brown, Virginia L; Hahn, Michael G; Haigler, Candace H

    2013-01-01

    Cotton fiber is an important natural textile fiber due to its exceptional length and thickness. These properties arise largely through primary and secondary cell wall synthesis. The cotton fiber of commerce is a cellulosic secondary wall surrounded by a thin cuticulated primary wall, but there were only sparse details available about the polysaccharides in the fiber cell wall of any cotton species. In addition, Gossypium hirsutum (Gh) fiber was known to have an adhesive cotton fiber middle lamella (CFML) that joins adjacent fibers into tissue-like bundles, but it was unknown whether a CFML existed in other commercially important cotton fibers. We compared the cell wall chemistry over the time course of fiber development in Gh and Gossypium barbadense (Gb), the two most important commercial cotton species, when plants were grown in parallel in a highly controlled greenhouse. Under these growing conditions, the rate of early fiber elongation and the time of onset of secondary wall deposition were similar in fibers of the two species, but as expected the Gb fiber had a prolonged elongation period and developed higher quality compared to Gh fiber. The Gb fibers had a CFML, but it was not directly required for fiber elongation because Gb fiber continued to elongate rapidly after CFML hydrolysis. For both species, fiber at seven ages was extracted with four increasingly strong solvents, followed by analysis of cell wall matrix polysaccharide epitopes using antibody-based Glycome Profiling. Together with immunohistochemistry of fiber cross-sections, the data show that the CFML of Gb fiber contained lower levels of xyloglucan compared to Gh fiber. Xyloglucan endo-hydrolase activity was also higher in Gb fiber. In general, the data provide a rich picture of the similarities and differences in the cell wall structure of the two most important commercial cotton species.

  12. Molecular characters and different expression of WRKY1 gene from Gossypium barbadense L. and Gossypium hirsutum L.

    Directory of Open Access Journals (Sweden)

    Jianfeng Liu

    2016-11-01

    Full Text Available Cotton is one of the most important economic crops in the world. Gossypium barbadense L. has higher resistance to Verticillium wilt than Gossypium hirsutum L. In the present study, seedlings of Pima90-53 (G. barbadense had better growth performance than those of CRI8 (G. hirsutum inoculated with Verticillium dahliae. WRKY1 genomic DNA of Pima90-53 and CRI8 were isolated (GbWRKY1 and GhWRKY1 and predicted to include three introns which were 289, 92, 87 bp and 286, 92, 87 bp in length, respectively. Compared with the DNA sequence of GbWRKY1, GhWRKY1 had a 13-base deletion in exon 4, which resulted in premature termination of translation. It was predicted that the GbWRKY1 and GhWRKY1 proteins contain two WRKY domains and zinc-finger motifs belonging to group I WRKY proteins. Two promoters, located 1745 bp and 1738 bp upstream of GbWRKY1 and GhWRKY1, were cloned and predicted to contain important regulatory elements (TATA-box, CAAT-box and pathogen/elicitor-related elements. Interestingly, compared with GbWRKY1, the GhWRKY1 promoter lacked an ethylene-responsive element (ERE component. The relative expression of GbWRKY1, too, was higher than that of GhWRKY1 after V. dahliae and ACC (1-aminocyclopropane-1-carboxylic acid induction. The results suggest that the difference in the promoter sequence could probably be one of the reasons that lead to different expression patterns and resistance to Verticillium wilt in Pima90-53 and CRI8.

  13. Link between defoliation and light treatments on root vitality of five understory shrubs with different resistance to insect herbivory.

    Science.gov (United States)

    Karolewski, Piotr; Zadworny, Marcin; Mucha, Joanna; Napierała-Filipiak, Anna; Oleksyn, Jacek

    2010-08-01

    Understory shrubs are frequently attacked by insect herbivores. However, very little is known regarding possible interactions between light condition, defoliation (D) and fine root vitality (% live roots) and metabolic activity, and whether different plant strategies (compensation, trade-off and equilibrium) to defoliation depend on individual species light requirements. To explore the response of roots to such conditions, an experiment was established in which we experimentally removed 50% of leaves in 1-year-old seedlings of Sambucus nigra, Cornus sanguinea, Prunus serotina, Frangula alnus and Corylus avellana grown in 15% and full sunlight. On average, defoliation leads to a 15% reduction in fine root (vitality (% live roots). However, a statistically significant reduction in root vitality after defoliation was detected only in those species that are less herbivorized in nature (48% in S. nigra and 5% in C. sanguinea). On average, shade conditions (L) resulted in 18% decline in root vitality, and the effects of defoliation were also 22% higher than for plants grown in full light. Root vitality in both treatments (D and L) was significantly correlated with their dry mass, concentration of total phenol (TPh) and carbon to nitrogen ratio, and negatively correlated with nitrogen, soluble carbohydrates, starch and total non-structural carbohydrates (TNC). To a large extent, root vitality and chemistry varied by species. Higher root vitality was related to higher concentrations of phenolics, more than to N and TNC concentrations. Concentrations of phenolics also differed significantly between defoliated plants and controls. However, in defoliated plants, an increase in TPh was observed only in two species, which belong to two different groups in light requirements and susceptibility to insect grazing (C. sanguinea and P. serotina). This study indicated that higher vitality of roots occurred in species that are characterized by higher insect defoliation under natural

  14. Feoforbídeo (etoxi-purpurina-18 isolado de Gossypium mustelinum (Malvaceae Ethyl ester putpurin-18 from Gossypium mustelinum (Malvaceae

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    Tania Maria Sarmento Silva

    2010-01-01

    Full Text Available The phaeophorbide ethyl ester named Purpurin-18 and the flavonoids quercetin and kaempferol were obtained by chromatographic procedures from the chloroform fraction of aerial parts of Gossypium mustelinum. The structure of these compound was determined by NMR, IR and mass spectra data analysis. This is the first occurrence of this compound in Angiosperm.

  15. Genome-wide divergence, haplotype distribution and population demographic histories for Gossypium hirsutum and Gossypium barbadense as revealed by genome-anchored SNPs

    Science.gov (United States)

    Use of 10,129 singleton SNPs of known genomic location in tetraploid cotton provided unique opportunities to characterize genome-wide diversity among 440 Gossypium hirsutum and 219 G. barbadense cultivars and landrace accessions of widespread origin. Using the SNPs distributed genome-wide, we exami...

  16. Analysis of Complete Nucleotide Sequences of 12 Gossypium Chloroplast Genomes: Origin and Evolution of Allotetraploids

    Science.gov (United States)

    Xu, Qin; Xiong, Guanjun; Li, Pengbo; He, Fei; Huang, Yi; Wang, Kunbo; Li, Zhaohu; Hua, Jinping

    2012-01-01

    Background Cotton (Gossypium spp.) is a model system for the analysis of polyploidization. Although ascertaining the donor species of allotetraploid cotton has been intensively studied, sequence comparison of Gossypium chloroplast genomes is still of interest to understand the mechanisms underlining the evolution of Gossypium allotetraploids, while it is generally accepted that the parents were A- and D-genome containing species. Here we performed a comparative analysis of 13 Gossypium chloroplast genomes, twelve of which are presented here for the first time. Methodology/Principal Findings The size of 12 chloroplast genomes under study varied from 159,959 bp to 160,433 bp. The chromosomes were highly similar having >98% sequence identity. They encoded the same set of 112 unique genes which occurred in a uniform order with only slightly different boundary junctions. Divergence due to indels as well as substitutions was examined separately for genome, coding and noncoding sequences. The genome divergence was estimated as 0.374% to 0.583% between allotetraploid species and A-genome, and 0.159% to 0.454% within allotetraploids. Forty protein-coding genes were completely identical at the protein level, and 20 intergenic sequences were completely conserved. The 9 allotetraploids shared 5 insertions and 9 deletions in whole genome, and 7-bp substitutions in protein-coding genes. The phylogenetic tree confirmed a close relationship between allotetraploids and the ancestor of A-genome, and the allotetraploids were divided into four separate groups. Progenitor allotetraploid cotton originated 0.43–0.68 million years ago (MYA). Conclusion Despite high degree of conservation between the Gossypium chloroplast genomes, sequence variations among species could still be detected. Gossypium chloroplast genomes preferred for 5-bp indels and 1–3-bp indels are mainly attributed to the SSR polymorphisms. This study supports that the common ancestor of diploid A-genome species in

  17. Polyploidization altered gene functions in cotton (Gossypium spp.).

    Science.gov (United States)

    Xu, Zhanyou; Yu, John Z; Cho, Jaemin; Yu, Jing; Kohel, Russell J; Percy, Richard G

    2010-12-16

    Cotton (Gossypium spp.) is an important crop plant that is widely grown to produce both natural textile fibers and cottonseed oil. Cotton fibers, the economically more important product of the cotton plant, are seed trichomes derived from individual cells of the epidermal layer of the seed coat. It has been known for a long time that large numbers of genes determine the development of cotton fiber, and more recently it has been determined that these genes are distributed across At and Dt subgenomes of tetraploid AD cottons. In the present study, the organization and evolution of the fiber development genes were investigated through the construction of an integrated genetic and physical map of fiber development genes whose functions have been verified and confirmed. A total of 535 cotton fiber development genes, including 103 fiber transcription factors, 259 fiber development genes, and 173 SSR-contained fiber ESTs, were analyzed at the subgenome level. A total of 499 fiber related contigs were selected and assembled. Together these contigs covered about 151 Mb in physical length, or about 6.7% of the tetraploid cotton genome. Among the 499 contigs, 397 were anchored onto individual chromosomes. Results from our studies on the distribution patterns of the fiber development genes and transcription factors between the At and Dt subgenomes showed that more transcription factors were from Dt subgenome than At, whereas more fiber development genes were from At subgenome than Dt. Combining our mapping results with previous reports that more fiber QTLs were mapped in Dt subgenome than At subgenome, the results suggested a new functional hypothesis for tetraploid cotton. After the merging of the two diploid Gossypium genomes, the At subgenome has provided most of the genes for fiber development, because it continues to function similar to its fiber producing diploid A genome ancestor. On the other hand, the Dt subgenome, with its non-fiber producing D genome ancestor

  18. Mineral and Nutrient Leaf Composition of Two Cassava (Manihot esculenta Crantz Cultivars Defoliated at Varying Phenological Phases

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    Oyeyemi Adigun DADA

    2010-12-01

    Full Text Available The effect of defoliation on mineral and food value of two cassava varieties defoliated at varying phenological phases was studied to ascertain the appropriate phenological phase when harvested leaves would contain the optimum mineral and proximate composition, gross energy and the least cyanide content. Two cassava cultivars were subjected to defoliation at varying phenological stages including logarithmic, vegetative and physiological maturity phases. The mineral content was highest at the logarithmic phase than any other phases. The proximate composition of the cassava leaves showed that crude protein was highest at physiological maturity, while the least HCN was observed in cassava defoliated at logarithmic phase. Analysis of mineral and proximate content showed that leaf of the �TMS30572� cultivar had the highest mineral content, fat, fibre, ash, dry matter and gross energy at the logarithm phase while �Oko-Iyawo� had the highest crude protein and HCN at physiological maturity. This study indicates the high potential of cassava leaf as an unconventional source of protein for both humans and animals when defoliated at logarithmic growth phase.

  19. CMD: a Cotton Microsatellite Database resource for Gossypium genomics

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    Liu Shaolin

    2006-05-01

    Full Text Available Abstract Background The Cotton Microsatellite Database (CMD http://www.cottonssr.org is a curated and integrated web-based relational database providing centralized access to publicly available cotton microsatellites, an invaluable resource for basic and applied research in cotton breeding. Description At present CMD contains publication, sequence, primer, mapping and homology data for nine major cotton microsatellite projects, collectively representing 5,484 microsatellites. In addition, CMD displays data for three of the microsatellite projects that have been screened against a panel of core germplasm. The standardized panel consists of 12 diverse genotypes including genetic standards, mapping parents, BAC donors, subgenome representatives, unique breeding lines, exotic introgression sources, and contemporary Upland cottons with significant acreage. A suite of online microsatellite data mining tools are accessible at CMD. These include an SSR server which identifies microsatellites, primers, open reading frames, and GC-content of uploaded sequences; BLAST and FASTA servers providing sequence similarity searches against the existing cotton SSR sequences and primers, a CAP3 server to assemble EST sequences into longer transcripts prior to mining for SSRs, and CMap, a viewer for comparing cotton SSR maps. Conclusion The collection of publicly available cotton SSR markers in a centralized, readily accessible and curated web-enabled database provides a more efficient utilization of microsatellite resources and will help accelerate basic and applied research in molecular breeding and genetic mapping in Gossypium spp.

  20. Anther development and microsporegenesis in Gossypium herbaceum L.

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    Zahra Tajik Khaveh

    2016-11-01

    Full Text Available Gosseypium herbaceum L. is known as cotton plant belongs to the family Malvaceae. This plant is widely distributed throughout western India, Africa, Middle East countries, central Asia, and Availability is found in Iran, Afghanistan, Russian and Turkistan. Gossypium herbaceum L. is a cultivateda cotton species (2n=2x =26,A₁ A₁ has favorable traits such as excellent drought tolerance and resistance to sucking insects and leaf curl virus. In this study, microsporegenesis and anther development of G.herbaceum were studied. The flower, in different developmental stages, were removed, fixed in formalin-glacial acetic acid- lcohol(FAA,stored in 70%ethanol,embedded in paraffin and then sliced at 8-10Mm by rotary microtom. Staining was carried out by periodic Acid Shiff (PASand contrasted with hematoxylin. Scanning electron microscope(SEM was used to analyze the mature pollen grains. The results indicated that anthers wall development followed the dicotyledonous type and were tetrasporangiate which composed of epidermal layer, endotheciumlayer, middle layer and tapetum layer.

  1. Elevated CO2, not defoliation, enhances N cycling and increases short-term soil N immobilization regardless of N addition in a semiarid grassland

    Science.gov (United States)

    Elevated CO2 and defoliation effects on nitrogen (N) cycling in rangeland soils remain poorly understood. Here we tested whether effects of elevated CO2 and defoliation (clipping to 2.5 cm height) on N cycling depended on soil N availability (addition of 1 vs. 11 g N/m2) in intact mesocosms extracte...

  2. Características dos cachos e bagas de uvas ‘Centennial Seedless’ tratadas com thidiazuron e ácido giberélico / Characteristics of clusters and berries of ‘Centennial Seedless’ table grapes treated with thidiazuron and giberellic acid

    Directory of Open Access Journals (Sweden)

    Willian Rodrigues Macedo

    2010-12-01

    Full Text Available Com o objetivo de avaliar os efeitos das doses de ácido giberélico (AG3 e do thidiazuron (TDZ nas características dos cachos e bagas da uva ‘Centennial Seedless’, um experimento foi realizado em um vinhedo comercial em São Miguel Arcanjo (SP. Os tratamentos consistiram de AG3 nas doses de 0 e 5 mg L-1 associados às doses de 0, 2, 4, 6, 8 e 10 mg L-1 de TDZ, sendo estes reguladores vegetais aplicados aos 15 dias após o pleno florescimento, via pulverização direta nos cachos. Foram avaliadas as variáveis diâmetro do pedicelo, índice de esbagoamento, massa, comprimento e largura dos cachos, bagas e engaços; teores de sólidos solúveis, pH, acidez titulável e relação SS/AT do mosto. A dose de 8 mg L-1 de TDZ associada a 5 mg L-1 de AG3, resultou em maiores médias de massa, comprimento e largura dos cachos, sendo que esta interação não alterou o pH, a relação SS/AT e o índice de esbagoamento dos cachos. O TDZ promoveu aumentos lineares sobre a massa e largura das bagas e reduziu os teores de sólidos solúveis, sendo que do ponto de vista agronômico a dose de 8 mg L-1, apresentou-se mais promissora para uso comercial.Abstract With the objective of evaluating the effects of gibberellic acid (GA3 and thidiazuron (TDZ on the physicochemical characteristics of ‘Centennial Seedless’ table grapes a trial was carried out in a commercial vineyard located in São Miguel Arcanjo (SP, Brazil. The treatments consisted of GA3 on the doses at 0 and 5 mg L-1 associated to 0, 2, 4, 6, 8 and 10 mg L-1 of thidiazuron, applied 15 days after full bloom, sprayed directly to the clusters. The following variables were evaluated: pedicel diameter, drop index, weight, length and width of clusters, berries and rachis; soluble solutes content, pH, titratable acidity and ratio SS/TA of the juice. The dose at 8 mg L-1 of TDZ associated to 5 mg L-1 of AG3 resulted in the highest means of cluster weight, length and width, this interaction did not

  3. Defoliating Insect Mass Outbreak Affects Soil N Fluxes and Tree N Nutrition in Scots Pine Forests

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    Maren M. Grüning

    2017-06-01

    Full Text Available Biotic stress by mass outbreaks of defoliating pest insects does not only affect tree performance by reducing its photosynthetic capacity, but also changes N cycling in the soil of forest ecosystems. However, how insect induced defoliation affects soil N fluxes and, in turn, tree N nutrition is not well-studied. In the present study, we quantified N input and output fluxes via dry matter input, throughfall, and soil leachates. Furthermore, we investigated the effects of mass insect herbivory on tree N acquisition (i.e., organic and inorganic 15N net uptake capacity of fine roots as well as N pools in fine roots and needles in a Scots pine (Pinus sylvestris L. forest over an entire vegetation period. Plots were either infested by the nun moth (Lymantria monacha L. or served as controls. Our results show an increased N input by insect feces, litter, and throughfall at the infested plots compared to controls, as well as increased leaching of nitrate. However, the additional N input into the soil did not increase, but reduce inorganic and organic net N uptake capacity of Scots pine roots. N pools in the fine roots and needles of infested trees showed an accumulation of total N, amino acid-N, protein-N, and structural N in the roots and the remaining needles as a compensatory response triggered by defoliation. Thus, although soil N availability was increased via surplus N input, trees did not respond with an increased N acquisition, but rather invested resources into defense by accumulation of amino acid-N and protein-N as a survival strategy.

  4. Monitoring gypsy moth defoliation by applying change detection techniques to Landsat imagery

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    Williams, D. L.; Stauffer, M. L.

    1978-01-01

    The overall objective of a research effort at NASA's Goddard Space Flight Center is to develop and evaluate digital image processing techniques that will facilitate the assessment of the intensity and spatial distribution of forest insect damage in Northeastern U.S. forests using remotely sensed data from Landsats 1, 2 and C. Automated change detection techniques are presently being investigated as a method of isolating the areas of change in the forest canopy resulting from pest outbreaks. In order to follow the change detection approach, Landsat scene correction and overlay capabilities are utilized to provide multispectral/multitemporal image files of 'defoliation' and 'nondefoliation' forest stand conditions.

  5. Potential of VIIRS Data for Regional Monitoring of Gypsy Moth Defoliation: Implications for Forest Threat Early Warning System

    Science.gov (United States)

    Spruce, Joseph P.; Ryan, Robert E.; Smoot, James C.; Prados, Donald; McKellip, Rodney; Sader. Steven A.; Gasser, Jerry; May, George; Hargrove, William

    2007-01-01

    A NASA RPC (Rapid Prototyping Capability) experiment was conducted to assess the potential of VIIRS (Visible/Infrared Imager/Radiometer Suite) data for monitoring non-native gypsy moth (Lymantria dispar) defoliation of forests. This experiment compares defoliation detection products computed from simulated VIIRS and from MODIS (Moderate Resolution Imaging Spectroradiometer) time series products as potential inputs to a forest threat EWS (Early Warning System) being developed for the USFS (USDA Forest Service). Gypsy moth causes extensive defoliation of broadleaved forests in the United States and is specifically identified in the Healthy Forest Restoration Act (HFRA) of 2003. The HFRA mandates development of a national forest threat EWS. This system is being built by the USFS and NASA is aiding integration of needed satellite data products into this system, including MODIS products. This RPC experiment enabled the MODIS follow-on, VIIRS, to be evaluated as a data source for EWS forest monitoring products. The experiment included 1) assessment of MODIS-simulated VIIRS NDVI products, and 2) evaluation of gypsy moth defoliation mapping products from MODIS-simulated VIIRS and from MODIS NDVI time series data. This experiment employed MODIS data collected over the approximately 15 million acre mid-Appalachian Highlands during the annual peak defoliation time frame (approximately June 10 through July 27) during 2000-2006. NASA Stennis Application Research Toolbox software was used to produce MODIS-simulated VIIRS data and NASA Stennis Time Series Product Tool software was employed to process MODIS and MODIS-simulated VIIRS time series data scaled to planetary reflectance. MODIS-simulated VIIRS data was assessed through comparison to Hyperion-simulated VIIRS data using data collected during gypsy moth defoliation. Hyperion-simulated MODIS data showed a high correlation with actual MODIS data (NDVI R2 of 0.877 and RMSE of 0.023). MODIS-simulated VIIRS data for the same

  6. Genotype and planting density effects on rooting traits and yield in cotton (Gossypium hirsutum L.)

    NARCIS (Netherlands)

    Zhang, L.Z.; Li, B.G.; Yan, G.T.; Werf, van der W.; Spiertz, J.H.J.; Zhang, S.P.

    2006-01-01

    Root density distribution of plants is a major indicator of competition between plants and determines resource capture from the soil. This experiment was conducted in 2005 at Anyang, located in the Yellow River region, Henan Province, China. Three cotton (Gossypium hirsutum L.) cultivars were

  7. Development of a core set of SSR markers for the characterization of Gossypium germplasm

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    Molecular markers such as simple sequence repeats (SSR) are a useful tool for characterizing genetic diversity of Gossypium germplasm collections. Genetic profiles by DNA fingerprinting of cotton accessions can only be compared among different collections if a common set of molecular markers are us...

  8. Genome-Wide Characterization and Expression Profiles of the Superoxide Dismutase Gene Family in Gossypium

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    Jingbo Zhang

    2016-01-01

    Full Text Available Superoxide dismutase (SOD as a group of significant and ubiquitous enzymes plays a critical function in plant growth and development. Previously this gene family has been investigated in Arabidopsis and rice; it has not yet been characterized in cotton. In our study, it was the first time for us to perform a genome-wide analysis of SOD gene family in cotton. Our results showed that 10 genes of SOD gene family were identified in Gossypium arboreum and Gossypium raimondii, including 6 Cu-Zn-SODs, 2 Fe-SODs, and 2 Mn-SODs. The chromosomal distribution analysis revealed that SOD genes are distributed across 7 chromosomes in Gossypium arboreum and 8 chromosomes in Gossypium raimondii. Segmental duplication is predominant duplication event and major contributor for expansion of SOD gene family. Gene structure and protein structure analysis showed that SOD genes have conserved exon/intron arrangement and motif composition. Microarray-based expression analysis revealed that SOD genes have important function in abiotic stress. Moreover, the tissue-specific expression profile reveals the functional divergence of SOD genes in different organs development of cotton. Taken together, this study has imparted new insights into the putative functions of SOD gene family in cotton. Findings of the present investigation could help in understanding the role of SOD gene family in various aspects of the life cycle of cotton.

  9. Isolation and characterization of terpene synthases in cotton (Gossypium hirsutum).

    Science.gov (United States)

    Yang, Chang-Qing; Wu, Xiu-Ming; Ruan, Ju-Xin; Hu, Wen-Li; Mao, Yin-Bo; Chen, Xiao-Ya; Wang, Ling-Jian

    2013-12-01

    Cotton plants accumulate gossypol and related sesquiterpene aldehydes, which function as phytoalexins against pathogens and feeding deterrents to herbivorous insects. However, to date little is known about the biosynthesis of volatile terpenes in this crop. Herein is reported that 5 monoterpenes and 11 sesquiterpenes from extracts of a glanded cotton cultivar, Gossypium hirsutum cv. CCRI12, were detected by gas chromatography-mass spectrometry (GC-MS). By EST data mining combined with Rapid Amplification of cDNA Ends (RACE), full-length cDNAs of three terpene synthases (TPSs), GhTPS1, GhTPS2 and GhTPS3 were isolated. By in vitro assays of the recombinant proteins, it was found that GhTPS1 and GhTPS2 are sesquiterpene synthases: the former converted farnesyl pyrophosphate (FPP) into β-caryophyllene and α-humulene in a ratio of 2:1, whereas the latter produced several sesquiterpenes with guaia-1(10),11-diene as the major product. By contrast, GhTPS3 is a monoterpene synthase, which produced α-pinene, β-pinene, β-phellandrene and trace amounts of other monoterpenes from geranyl pyrophosphate (GPP). The TPS activities were also supported by Virus Induced Gene Silencing (VIGS) in the cotton plant. GhTPS1 and GhTPS3 were highly expressed in the cotton plant overall, whereas GhTPS2 was expressed only in leaves. When stimulated by mechanical wounding, Verticillium dahliae (Vde) elicitor or methyl jasmonate (MeJA), production of terpenes and expression of the corresponding synthase genes were induced. These data demonstrate that the three genes account for the biosynthesis of volatile terpenes of cotton, at least of this Upland cotton. Copyright © 2013 Elsevier Ltd. All rights reserved.

  10. Dose and time dependent efficacy alteration of different defoliants on seed cotton yield.

    Science.gov (United States)

    Singh, Kulvir; Rathore, Pankaj; Singh, Kuldeep

    2015-07-01

    Field experiments were conducted during 2012 and 2013 to determine the effect of select defoliants i.e dropp ultra and ethrel, their optimal dose and suitable time of application on earliness and seed cotton yield in 3 American cotton cultivars. MRC7361BGII (3055.2 kg ha(-1)) and MRC7017BGII (2913.0 kg ha(-1)) resulted in significantly improved seed cotton yield as compared to F1 861 (2346.0 kg ha(-1)). Dropp ultra? @ 200 ml ha(-1) revealed highest yield (3018.7 kg ha(-1)) followed by ethrel @ 2000 ppm (2820.1 kg ha(-1)) and control (2730.0 kg ha(-1)) , while statistically least yield (2516.9 kg ha(-1)) was observed with higher dose of dropp ultra @ 225 ml ha(-1). Defoliants applied 150 days after sowing (DAS) resulted in significantly better yield (2853.3 kg ha(-1)) as compared to the early application at 140 DAS (2689.5 kg ha(-1) owing to improvement in open bolls and boll weight. Pooled data indicated that dropp ultra @ 200 ml ha(-1) has potential to promote crop earliness, better boll opening and their retention by keeping vegetative and reproductive growth in harmony to enhance seed cotton yield.

  11. Classification of Defoliated Trees Using Tree-Level Airborne Laser Scanning Data Combined with Aerial Images

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    Juha Hyyppa

    2010-11-01

    Full Text Available Climate change and rising temperatures have been observed to be related to the increase of forest insect damage in the boreal zone. The common pine sawfly (Diprion pini L. (Hymenoptera, Diprionidae is regarded as a significant threat to boreal pine forests. Defoliation by D. pini can cause severe growth loss and tree mortality in Scots pine (Pinus sylvestris L. (Pinaceae. In this study, logistic LASSO regression, Random Forest (RF and Most Similar Neighbor method (MSN were investigated for predicting the defoliation level of individual Scots pines using the features derived from airborne laser scanning (ALS data and aerial images. Classification accuracies from 83.7% (kappa 0.67 to 88.1% (kappa 0.76 were obtained depending on the method. The most accurate result was produced using RF with a combination of data from the two sensors, while the accuracies when using ALS and image features separately were 80.7% and 87.4%, respectively. Evidently, the combination of ALS and aerial images in detecting needle losses is capable of providing satisfactory estimates for individual trees.

  12. Public tolerance to defoliation and flower distortion in a public horticulture garden.

    Science.gov (United States)

    Sadof, Clifford S; Sclar, D Casey

    2002-04-01

    Surveys of visitor and grower perception of live potted plant quality were conducted in various locations in a large public display garden. Canna lily, Canna x generalis L.H.Bailey, was used to examine effects of defoliation by Japanese beetle, Popillia japonica Newman, on public perception. Chrysanthemums, Chrysanthemum x morifolium Ramat., were used to identify visitor and grower tolerance to flower distortion caused by western flower thrips, Frankliniella occidentalis (Pergande), on single and multiple flowered plants. On average, the maximum amount of defoliation or flower distortion tolerated by any respondent was low (< or = 10% for canna and < or = 25% for chrysanthemum). The level of acceptable injury was influenced by factors intrinsic to both the respondents and the plants themselves. Tolerance to injury was negatively associated with the risk aversion of the respondents. Visitors were less tolerant of injury on plants they considered for purchase than those that they would view at the garden. Similarly, grower tolerance was lower than that of visitors because producing substandard plants could put their professional reputation at risk. Factors that distracted visitor attention (e.g., presence of flowers and higher levels of background injury) increased their tolerance to plant injury. Visitors tolerated greater levels of flower distortion on multiple flowering chrysanthemum than on those with single flowers. We suggest that tolerance to insect pests can be increased by designing plantings that distract viewers from injured plant parts.

  13. EFFECT OF DEFOLIATION ON THE YIELD AND QUALITY OF ‘PRATA COMUM’ BANANA FRUITS

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    JULIANA DOMINGUES LIMA

    Full Text Available ABSTRACT With the advent of black sigatoka in commercial banana crops in the “Vale do Ribeira” region, state of São Paulo, the monitoring the severity and chemical control of the disease in susceptible varieties have become more frequent in order to avoid leaf loss. This study simulated the effect of defoliation caused by the disease on the yield and quality of ‘Prata Comum’ banana fruits, depending on the formation period and fruit position in the bunch. The experimental design was completely randomized in a 2 x11 factorial scheme (period of bunch formation x number of leaves at flowering, 6-16 leaves at flowering in two periods of bunch formation with six replicates. In Period 1, flowering occurred at 04/15/13 and in Period 2 at 01/07/14, although in Period 1, bunch mass was higher and in Period 2, higher average maximum and minimum daily temperatures, precipitation and radiation were observed. Regardless of formation period, the number of leaves at flowering affected bunch mass, which ranged from 18 to 23 kg plant-1. Defoliation affected the size of fruits of hand 1 and last hand of the bunch, but not the variability in fruit size due to the position the fruit occupies in the bunch and physicochemical characteristics.

  14. The influence of Tamarix ramosissima defoliation on population movements of the northern tamarisk beetle (Diorhabda carinulata) within the Colorado Plateau: Chapter 18

    Science.gov (United States)

    Jamison, Levi R.; van Riper, Charles; Bean, Dan W.

    2015-01-01

    The northern tamarisk beetle (Diorhabda carinulata) was introduced to the Colorado Plateau within the Colorado River Basin in 2004, in an effort to control invasive/exotic tamarisk (Tamarix ramosissima) plants. Since release, there has been rapid beetle colonization and subsequent defoliation of tamarisk along the Colorado River corridor. We collected plant phenology and beetle abundance data from the Dolores and San Juan rivers, two major tributaries of the Colorado River, to document tamarisk defoliation and beetle movement patterns. We found D. carinulata population movement patterns to be highly influenced by the availability of food resources, with local beetle boom and bust events appearing common. Beetles were able to defoliate from 35-65 km of river corridor tamarisk habitat each year. Following intensive tamarisk defoliation of large riparian reaches, beetles displayed a pattern of temporary abandonment in the following year with recolonization of that habitat in the subsequent year. Larvae were found primarily in areas that had partial defoliation, while adults occurred throughout the river corridor but most often on the leading edge of defoliated habitats. Understanding this type of beetle behavior and movement patterns will be useful in the management of areas where D. carinulata has been established, and in areas where it has not yet colonized. This will also assist land managers to further understand how defoliation and the presence of D. carinulata influence tamarisk-dominated habitats within Colorado Plateau riparian ecosystems.

  15. Cloning and expression of 1-aminocyclopropane-1-carboxylate oxidase cDNA induced by thidiazuron during somatic embryogenesis of alfalfa (Medicago sativa).

    Science.gov (United States)

    Feng, Bi-Hong; Wu, Bei; Zhang, Chun-Rong; Huang, Xia; Chen, Yun-Feng; Huang, Xue-Lin

    2012-01-15

    Embryogenic callus (EC) induced from petioles of alfalfa (Medicago sativa L. cv. Jinnan) on B5h medium turned green, compact and non-embryogenic when the kinetin (KN) in the medium was replaced partially or completely by thidiazuron (TDZ). The application of CoCl₂, which is an inhibitor of 1-aminocyclopropane-1-carboxylate oxidase (ACO), counteracted the effect of TDZ. Ethylene has been shown to be involved in the modulation of TDZ-induced morphogenesis responses. However, very little is known about the genes involved in ethylene formation during somatic embryogenesis (SE). To investigate whether ethylene mediated by ACO is involved in the effect of TDZ on inhibition of embryogenic competence of the alfalfa callus. In this study we cloned full-length ACO cDNA from the alfalfa callus, named MsACO, and observed changes in this gene expression during callus formation and induction of SE under treatment with TDZ or TDZ plus CoCl₂. RNA blot analysis showed that during the EC subcultural period, the expression level of MsACO in EC was significantly increased on the 2nd day, rose to the highest level on the 8th day and remained at this high level until the 21st day. However, the ACO expression in the TDZ (0.93 μM)-treated callus was higher than in the EC especially on the 8th day. Moreover the ACO expression level increased with increasing TDZ concentration during the subcultural/maintenance period of the callus. It is worth noting that comparing the treatment with TDZ alone, the treatment with 0.93 μM TDZ plus 50 μM CoCl₂ reduced both of the ACO gene expressions and ACO activity in the treated callus. These results indicate that the effect of TDZ could be counteracted by CoCl₂ either on the ACO gene expression level or ACO activity. Thus, a TDZ inhibitory effect on embryogenic competence of alfalfa callus could be mediated by ACO gene expression. Crown Copyright © 2011. Published by Elsevier GmbH. All rights reserved.

  16. Some timber product market and trade implications of an invasive defoliator: the case of Asian lymantria in the United States

    Science.gov (United States)

    Jeffrey P. Prestemon; James A. Turner; Joseph Buongiorno; Shushuai Zhu; Ruhong Li

    2008-01-01

    US policy and forest product industry decisionmakers need quantitative information about the magnitude of timber product market impacts from the possible introduction of an exotic and potentially dangerous defoliating forest pest. We applied the Global Forest Products Model to evaluate the effects on the United States of an invasion by the Asian gypsy (...

  17. Development of Screening Trials to Rank Pinus radiata Genotypes for Resistance to Defoliation by Monterey Pine Aphid (Essigella californica)

    Science.gov (United States)

    Stephen Elms; Peter Ades; Nick Collet

    2012-01-01

    The Monterey pine aphid (Essigella californica) is a recent arrival in Australia, having first been detected in 1998. It quickly spread throughout the national radiata pine (Pinus radiata D. Don) plantation estate, causing seasonal defoliation and compromising tree growth in many areas. Selection of resistant radiata...

  18. Defoliation and Soil Compaction Jointly Drive Large-Herbivore Grazing Effects on Plants and Soil Arthropods on Clay Soil

    NARCIS (Netherlands)

    van Klink, R.; Schrama, M.; Nolte, S.; Bakker, J. P.; WallisDeVries, M. F.; Berg, M. P.

    In addition to the well-studied impacts of defecation and defoliation, large herbivores also affect plant and arthropod communities through trampling, and the associated soil compaction. Soil compaction can be expected to be particularly important on wet, fine-textured soils. Therefore, we

  19. Defoliation and Soil Compaction Jointly Drive Large-Herbivore Grazing Effects on Plants and Soil Arthropods on Clay Soil

    NARCIS (Netherlands)

    van Klink, R.; Schrama, M.; Nolte, S.; Bakker, Jan P.; WallisDeVries, M.F.; Berg, M.P.

    2015-01-01

    In addition to the well-studied impacts of defecation and defoliation, large herbivores also affect plant and arthropod communities through trampling, and the associated soil compaction. Soil compaction can be expected to be particularly important on wet, fine-textured soils. Therefore, we

  20. Fire and season of post-fire defoliation effects on biomass, composition and cover in mixed-grass prairie

    Science.gov (United States)

    North American prairies are acknowledged to have evolved with grazing following fire. Given this evolutionary fire-grazing interaction, our objective was to determine whether seasonal timing of defoliation following fire alters subsequent productivity and species composition. Following the April 201...

  1. Impact of the defoliating moth Hypena opulenta on invasive swallow-worts (Vincetoxicum species) under different light environments

    Science.gov (United States)

    Black and pale swallow-wort (Vincetoxicum nigrum and V. rossicum, Apocynaceae: Asclepiadoideae) are twining vines from Europe that have become invasive in the northeastern USA and southeastern Canada. Hypena opulenta (Christoph) (Lepidoptera: Erebidae), a defoliating forest moth from the Ukraine, ha...

  2. Gas exchange and plant growth after defoliation on Leandra lacunosa, a cerrado woody species with continuous leaf production

    Directory of Open Access Journals (Sweden)

    Maria Angélica Damascos

    2005-11-01

    Full Text Available Morphological and physiological leaf traits were studied on control and defoliated potted Leandra lacunosa young plants. After defoliation, remaining bottom leaves showed no significant change in net photosynthesis and stomatal conductance values with time, but the leaf transpiration rate was higher. The production of the new leaves was greater after defoliation in top defoliated plants. Bottom defoliated plants increased stem extension rates and net photosynthesis transitorily. Two months after defoliation, control and defoliated plants did not differ in stem length and root dry mass values. In spite of smaller area and photosynthetic capacity, remaining bottom leaves were able to compensate top leaves elimination. The effectiveness of this compensatory response, however, depended on the ability of new leaves to escape from herbivores.Características morfológicas e fisiológicas foliares foram estudadas em indivíduos jovens envasados de Leandra lacunosa que sofreram desfolhamento e em indivíduos controle. Após o desfolhamento, as folhas remanescentes da parte inferior não apresentaram mudanças significativas dos valores de fotossíntese e condutância estomática. Entretanto, a taxa de transpiração foliar foi maior quando comparada com plantas desfolhadas em porções inferiores. A rebrota de folhas foi maior após o desfolhamento da parte superior. Nas plantas desfolhadas em porções inferiores, ocorreu, momentaneamente, aumento da taxa fotossintética e da extensão do caule. Após dois meses de desfolhamento as plantas controle e desfolhadas não diferiram quanto aos valores do comprimento do caule e massa seca da raiz. Portanto, apesar da menor área foliar e menor capacidade fotossintética, as folhas na parte inferior foram capazes de compensar a eliminação das folhas superiores. A efetividade desta resposta compensatória, no entanto, dependerá da habilidade das novas folhas emitidas escaparem do ataque dos herbívoros.

  3. Sequential effects of severe drought and defoliation on tree growth and survival in a diverse temperate mesic forest

    Science.gov (United States)

    Matthes, J. H.; Pederson, N.; David, O.; Martin-Benito, D.

    2017-12-01

    Understanding the effects of climate change and biotic disturbance within diverse temperate mesic forests is complicated by the need to scale between impacts within individuals and across species in the community. It is not clear how these impacts within individuals and across a community influences the stand- and regional-scale response. Furthermore, co-occurring or sequential disturbances can make it challenging to interpret forest responses from observational data. In the northeastern United States, the 1960s drought was perhaps the most severe period of climatic stress within the past 300 years and negatively impacted the growth of individual trees across all species, but unevenly. Additionally, in 1981 the northeast experienced an outbreak of the defoliator Lymantria dispar, which preferentially consumes oak leaves, but in 1981 impacted a high proportion of other species as well. To investigate the effects of drought (across functional groups) and defoliation (within a functional group), we combined a long-term tree-ring dataset from an old-growth forest within the Palmaghatt Ravine in New York with a version of the Ecosystem Demography model that includes a scheme for representing forest insects and pathogens. We explored the sequential impacts of severe drought and defoliation on tree growth, community composition, and ecosystem-atmosphere interactions (carbon, water, and heat flux). W­e also conducted a set of modeling experiments with climate and defoliation disturbance scenarios to bound the potential long-term response of this forest to co-occurring and sequential drought-defoliator disturbances over the next fifty years.

  4. Whole-plant versus leaf-level regulation of photosynthetic responses after partial defoliation in Eucalyptus globulus saplings.

    Science.gov (United States)

    Eyles, Alieta; Pinkard, Elizabeth A; Davies, Noel W; Corkrey, Ross; Churchill, Keith; O'Grady, Anthony P; Sands, Peter; Mohammed, Caroline

    2013-04-01

    Increases in photosynthetic capacity (A1500) after defoliation have been attributed to changes in leaf-level biochemistry, water, and/or nutrient status. The hypothesis that transient photosynthetic responses to partial defoliation are regulated by whole-plant (e.g. source-sink relationships or changes in hydraulic conductance) rather than leaf-level mechanisms is tested here. Temporal variation in leaf-level gas exchange, chemistry, whole-plant soil-to-leaf hydraulic conductance (KP), and aboveground biomass partitioning were determined to evaluate mechanisms responsible for increases in A1500 of Eucalyptus globulus L. potted saplings. A1500 increased in response to debudding (B), partial defoliation (D), and combined B&D treatments by up to 36% at 5 weeks after treatment. Changes in leaf-level factors partly explained increases in A1500 of B and B&D treatments but not for D treatment. By week 5, saplings in B, B&D, and D treatments had similar leaf-specific KP to control trees by maintaining lower midday water potentials and higher transpiration rate per leaf area. Whole-plant source:sink ratios correlated strongly with A1500. Further, unlike KP, temporal changes in source:sink ratios tracked well with those observed for A1500. The results indicate that increases in A1500 after partial defoliation treatments were largely driven by an increased demand for assimilate by developing sinks rather than improvements in whole-plant water relations and changes in leaf-level factors. Three carbohydrates, galactional, stachyose, and, to a lesser extent, raffinose, correlated strongly with photosynthetic capacity, indicating that these sugars may function as signalling molecules in the regulation of longer term defoliation-induced gas exchange responses.

  5. Contrasting impacts of defoliation on root colonization by arbuscular mycorrhizal and dark septate endophytic fungi of Medicago sativa.

    Science.gov (United States)

    Saravesi, K; Ruotsalainen, A L; Cahill, J F

    2014-05-01

    Individual plants typically interact with multiple mutualists and enemies simultaneously. Plant roots encounter both arbuscular mycorrhizal (AM) and dark septate endophytic (DSE) fungi, while the leaves are exposed to herbivores. AMF are usually beneficial symbionts, while the functional role of DSE is largely unknown. Leaf herbivory may have a negative effect on root symbiotic fungi due to decreased carbon availability. However, evidence for this is ambiguous and no inoculation-based experiment on joint effects of herbivory on AM and DSE has been done to date. We investigated how artificial defoliation impacts root colonization by AM (Glomus intraradices) and DSE (Phialocephala fortinii) fungi and growth of Medicago sativa host in a factorial laboratory experiment. Defoliation affected fungi differentially, causing a decrease in arbuscular colonization and a slight increase in DSE-type colonization. However, the presence of one fungal species had no effect on colonization by the other or on plant growth. Defoliation reduced plant biomass, with this effect independent of the fungal treatments. Inoculation by either fungal species reduced root/shoot ratios, with this effect independent of the defoliation treatments. These results suggest AM colonization is limited by host carbon availability, while DSE may benefit from root dieback or exudation associated with defoliation. Reductions in root allocation associated with fungal inoculation combined with a lack of effect of fungi on plant biomass suggest DSE and AMF may be functional equivalent to the plant within this study. Combined, our results indicate different controls of colonization, but no apparent functional consequences between AM and DSE association in plant roots in this experimental setup.

  6. Assessing the Defoliation of Pine Forests in a Long Time-Series and Spatiotemporal Prediction of the Defoliation Using Landsat Data

    Directory of Open Access Journals (Sweden)

    Chenghao Zhu

    2018-02-01

    Full Text Available Pine forests (Pinus tabulaeformis have been in danger of defoliation by a caterpillar in the west Liaoning province of China for more than thirty years. This paper aims to assess and predict the degree of damage to pine forests by using remote sensing and ancillary data. Through regression analysis of the pine foliage remaining ratios of field plots with several vegetation indexes of Landsat data, a feasible inversion model was obtained to detect the degree of damage using the Normalized Difference Infrared Index of 5th band (NDII5. After comparing the inversion result of the degree of damage to the pine in 29 years and the historical damage record, quantized results of damage assessment in a long time-series were accurately obtained. Based on the correlation analysis between meteorological variables and the degree of damage from 1984 to 2015, the average degree of damage was predicted in temporal scale. By adding topographic and other variables, a linear prediction model in spatiotemporal scale was constructed. The spatiotemporal model was based on 5015 public pine points for 24 years and reached 0.6169 in the correlation coefficient. This paper provided a feasible and quantitative method in the spatiotemporal prediction of forest pest occurrence by remote sensing.

  7. Bioinformatics Analysis of Small RNAs in Pima (Gossypium barbadense L.)

    Science.gov (United States)

    Hu, Hongtao; Yu, Dazhao; Liu, Hong

    2015-01-01

    Small RNAs (sRNAs) are ~20 to 24 nucleotide single-stranded RNAs that play crucial roles in regulation of gene expression. In plants, sRNAs are classified into microRNAs (miRNAs), repeat-associated siRNAs (ra-siRNAs), phased siRNAs (pha-siRNAs), cis and trans natural antisense transcript siRNAs (cis- and trans-nat siRNAs). Pima (Gossypium barbadense L.) is one of the most economically important fiber crops, producing the best and longest spinnable fiber. Although some miRNAs are profiled in Pima, little is known about siRNAs, the largest subclass of plant sRNAs. In order to profile these gene regulators in Pima, a comprehensive analysis of sRNAs was conducted by mining publicly available sRNA data, leading to identification of 678 miRNAs, 3,559,126 ra-siRNAs, 627 pha-siRNAs, 136,600 cis-nat siRNAs and 79,994 trans-nat siRNAs. The 678 miRNAs, belonging to 98 conserved and 402 lineage-specific families, were produced from 2,138 precursors, of which 297 arose from introns, exons, or intron/UTR-exon junctions of protein-coding genes. Ra-siRNAs were produced from various repeat loci, while most (97%) were yielded from retrotransposons, especially LTRs (long terminal repeats). The genes encoding auxin-signaling-related proteins, NBS-LRRs and transcription factors were major sources of pha-siRNAs, while two conserved TAS3 homologs were found as well. Most cis-NATs in Pima overlapped in enclosed and convergent orientations, while a few hybridized in divergent and coincided orientations. Most cis- and trans-nat siRNAs were produced from overlapping regions. Additionally, characteristics of length and the 5’-first nucleotide of each sRNA class were analyzed as well. Results in this study created a valuable molecular resource that would facilitate studies on mechanism of controlling gene expression. PMID:25679373

  8. Parasitism and Food Web Structure in Defoliating Lepidoptera - Parasitoid Communities on Soybean.

    Science.gov (United States)

    Avalos, D S; Mangeaud, A; Valladares, G R

    2016-12-01

    Food webs are usually regarded as snapshots of community feeding interactions. Here, we describe the yearly and cumulative structure of parasitoid-caterpillar food webs on soybean in central Argentina, analyzing parasitism rates and their variability in relation to parasitoid diversity and food web vulnerability in the system. Lepidoptera larvae were collected along four seasons from soybean crops and reared in laboratory to obtain and identify adults and parasitoids. Eleven species of defoliating Lepidoptera and ten parasitoid species were recorded. Food web statistics showed rather low annual variability, with most variation coefficients in the order of 0.20 and generality showing the most stable values. Parasitism showed the highest variability, which was independent of parasitoid diversity and food web vulnerability, although parasitism rates were negatively related to parasitoid richness. Our study highlights the need to consider food web structure and variability in order to understand the functioning of ecological communities in general and in extensive agricultural ecosystems in particular.

  9. Characterization of eleven monosomic alien addition lines added from Gossypium anomalum to Gossypium hirsutum using improved GISH and SSR markers.

    Science.gov (United States)

    Wang, Xiaoxiao; Wang, Yingying; Wang, Chen; Chen, Yu; Chen, Yu; Feng, Shouli; Zhao, Ting; Zhou, Baoliang

    2016-10-07

    Gossypium anomalum (BB genome) possesses the desirable characteristics of drought tolerance, resistance to diseases and insect pests, and the potential for high quality fibers. However, it is difficult to transfer the genes associated with these desirable traits into cultivated cotton (G. hirsutum, AADD genome). Monosomic alien addition lines (MAALs) can be used as a bridge to transfer desired genes from wild species into G. hirsutum. In cotton, however, the high number and smaller size of the chromosomes has resulted in difficulties in discriminating chromosomes from wild species in cultivated cotton background, the development of cotton MAALs has lagged far behind many other crops. To date, no set of G. hirsutum-G. anomalum MAALs was reported. Here the amphiploid (AADDBB genome) derived from G. hirsutum × G. anomalum was used to generate a set of G. hirsutum-G. anomalum MAALs through a combination of consecutive backcrossing, genomic in situ hybridization (GISH), morphological survey and microsatellite marker identification. We improved the GISH technique used in our previous research by using a mixture of two probes from G. anomalum and G. herbaceum (AA genome). The results indicate that a ratio of 4:3 (G. anomalum : G. herbaceum) is the most suitable for discrimination of chromosomes from G. anomalum and the At-subgenome of G. hirsutum. Using this improved GISH technique, 108 MAAL individuals were isolated. Next, 170 G. hirsutum- and G. anomalum-specific codominant markers were obtained and employed for characterization of these MAAL individuals. Finally, eleven out of 13 MAALs were identified. Unfortunately, we were unable to isolate Chrs. 1B a and 5B a due to their very low incidences in backcrossing generation, as these remained in a condition of multiple additions. The characterized lines can be employed as bridges for the transfer of desired genes from G. anomalum into G. hirsutum, as well as for gene assignment, isolation of chromosome

  10. Phylogenetic analysis of Gossypium L. using restriction fragment length polymorphism of repeated sequences.

    Science.gov (United States)

    Zhang, Meiping; Rong, Ying; Lee, Mi-Kyung; Zhang, Yang; Stelly, David M; Zhang, Hong-Bin

    2015-10-01

    Cotton is the world's leading textile fiber crop and is also grown as a bioenergy and food crop. Knowledge of the phylogeny of closely related species and the genome origin and evolution of polyploid species is significant for advanced genomics research and breeding. We have reconstructed the phylogeny of the cotton genus, Gossypium L., and deciphered the genome origin and evolution of its five polyploid species by restriction fragment analysis of repeated sequences. Nuclear DNA of 84 accessions representing 35 species and all eight genomes of the genus were analyzed. The phylogenetic tree of the genus was reconstructed using the parsimony method on 1033 polymorphic repeated sequence restriction fragments. The genome origin of its polyploids was determined by calculating the diploid-polyploid restriction fragment correspondence (RFC). The tree is consistent with the morphological classification, genome designation and geographic distribution of the species at subgenus, section and subsection levels. Gossypium lobatum (D7) was unambiguously shown to have the highest RFC with the D-subgenomes of all five polyploids of the genus, while the common ancestor of Gossypium herbaceum (A1) and Gossypium arboreum (A2) likely contributed to the A-subgenomes of the polyploids. These results provide a comprehensive phylogenetic tree of the cotton genus and new insights into the genome origin and evolution of its polyploid species. The results also further demonstrate a simple, rapid and inexpensive method suitable for phylogenetic analysis of closely related species, especially congeneric species, and the inference of genome origin of polyploids that constitute over 70 % of flowering plants.

  11. GhNAC18, a novel cotton (Gossypium hirsutum L.) NAC gene, is ...

    African Journals Online (AJOL)

    EVANS

    GhNAC18 is a novel NAC gene that was isolated from cotton (Gossypium hirsutum L.). The full-length. cDNA was 1511 bp including an open reading frame of 1260 bp in length and encodes a protein of 419 amino acids. With qRT-PCR analysis, GhNAC18 was downregulated during natural and dark-induced senescence ...

  12. Ecotypic variation in growth responses to simulated herbivory: trade-off between maximum relative growth rate and tolerance to defoliation in an annual plant

    Science.gov (United States)

    Camargo, Iván D.; Tapia-López, Rosalinda; Núñez-Farfán, Juan

    2015-01-01

    It has been hypothesized that slow-growing plants are more likely to maximize above-ground biomass and fitness when defoliated by herbivores than those with an already high relative growth rate (RGR). Some populations of the annual herb Datura stramonium L. can tolerate foliar damage better than others. The physiological basis of this difference is examined here in a comparative study of two ecotypes that differ in tolerance and maximum growth rate, using a growth analytical approach. One hundred and fifty-four plants of each ecotype grown under controlled conditions were suddenly defoliated (35 % of total leaf area removed) and a similar sample size of plants remained undefoliated (control). Ontogenetic plastic changes in RGR and its growth components [net assimilation rate (NAR), specific leaf area and leaf weight ratio (LWR)] after defoliation were measured to determine whether these plastic changes maximize plant growth and fitness. Different ontogenetic phases of the response were discerned and increased RGR of defoliated plants was detected at the end of the experimental period, but brought about by a different growth component (NAR or LWR) in each ecotype. These changes in RGR are putatively related to increases in fitness in defoliated environments. At the intra-specific scale, data showed a trade-off between the ability to grow under benign environmental conditions and the ability to tolerate resource limitation due to defoliation. PMID:25725085

  13. Characterization of the global transcriptome for cotton (Gossypium hirsutum L.) anther and development of SSR marker.

    Science.gov (United States)

    Zhang, Xianwen; Ye, Zhenwei; Wang, Tiankang; Xiong, Hairong; Yuan, Xiaoling; Zhang, Zhigang; Yuan, Youlu; Liu, Zhi

    2014-11-10

    Cotton is an important fiber plant, and it's attractive to elucidate the molecular mechanism of anther development due to the close relationship between the anther fertility and boll-setting, and also fiber yield. In the present paper, 47.2 million paired-end reads with average length of 82.87 bp from the anthers of TM-1 (Gossypium hirsutum L.), a genetic standard line, were generated through transcriptome sequencing, and 210,965 unigenes of more than 100 bp were obtained. BLAST, KEGG, COG, and GO analyses showed that the genes were enriched in the processes of transcription, translation, and post-translation as well as hormone signal transduction, the transcription factor families, and cell wall-related genes mainly participating in cell expansion and carbohydrate metabolism. Further analysis identified 11,153 potential SSRs. A suit of 5122 primer pair sequences were designed, and 82 of 300 randomly selected primer pairs produced reproducible amplicons that were polymorphic among 22 cotton accessions from G. hirsutum, Gossypium barbadense and Gossypium arboreum. The UPGMA clustering analysis further confirmed high quality and effectiveness of these novel SSR markers. The present study provided insights into the transcriptome profile of the cotton and established a public information platform for functional genomics and molecular breeding. Copyright © 2014 Elsevier B.V. All rights reserved.

  14. Biomembrane stabilization and antiulcerogenic properties of aqueous leaf extract of Gossypium barbadense L. (Malvaceae

    Directory of Open Access Journals (Sweden)

    S. Sabiu

    2017-12-01

    Full Text Available Gossypium spp. belong to a class of botanicals with global therapeutic applications against a number of disorders including ulcers. This study evaluated the membrane stabilization and detoxification potential of aqueous leaf extract of Gossypium barbadense L. (Malvaceae in indomethacin-induced oxidative gastric ulceration in Wistar rats. The ulcerated rats were orally pretreated with the extract and esomeprazole for 4 weeks. Gastric function and antioxidative parameters were thereafter evaluated. The indomethacin-mediated significant elevations in the ulcer index, gastric volume, pepsin activity and mucosal level of malondialdehyde were dosedependently attenuated in the extract-treated animals. The extract also significantly modulated and improved the pH, mucin content, glutathione (reduced as well as gastric activities of superoxide dismutase and catalase in the ulcerated rats. These improvements may be ascribed to the antioxidant and membrane stabilization activities of the extract which are attributable to its active metabolites as revealed by the analytical chromatogram. The observed effects compared favorably with that of esomeprazole and are suggestive of the capability of the extract to prevent mucosal damage and preserve gastric functions as evidently supported by the macroscopical appearance of the stomachs and the % ulcer inhibitory values. Conclusively, the overall data from the present findings suggest that the aqueous leaf extract of G. barbadense could prevent indomethacin-mediated oxidative gastric ulceration via fortification of antioxidant defense mechanisms. Keywords: Esomeprazole, Gossypium barbadense, Indomethacin, Mucosal damage, Oxidative stress

  15. A comparative genomics approach revealed evolutionary dynamics of microsatellite imperfection and conservation in genus Gossypium.

    Science.gov (United States)

    Ahmed, Muhammad Mahmood; Shen, Chao; Khan, Anam Qadir; Wahid, Muhammad Atif; Shaban, Muhammad; Lin, Zhongxu

    2017-01-01

    Ongoing molecular processes in a cell could target microsatellites, a kind of repetitive DNA, owing to length variations and motif imperfection. Mutational mechanisms underlying such kind of genetic variations have been extensively investigated in diverse organisms. However, obscure impact of ploidization, an evolutionary process of genome content duplication prevails mostly in plants, on non-coding DNA is poorly understood. Genome sequences of diversely originated plant species were examined for genome-wide motif imperfection pattern, and various analytical tools were employed to canvass characteristic relationships among repeat density, imperfection and length of microsatellites. Moreover, comparative genomics approach aided in exploration of microsatellites conservation footprints in Gossypium evolution. Based on our results, motif imperfection in repeat length was found intricately related to genomic abundance of imperfect microsatellites among 13 genomes. Microsatellite decay estimation depicted slower decay of long motif repeats which led to predominant abundance of 5-nt repeat motif in Gossypium species. Short motif repeats exhibited rapid decay through the evolution of Gossypium lineage ensuing drastic decrease of 2-nt repeats, of which, "AT" motif type dilapidated in cultivated tetraploids of cotton. The outcome could be a directive to explore comparative evolutionary footprints of simple non-coding genetic elements i.e., repeat elements, through the evolution of genus-specific characteristics in cotton genomes.

  16. Effect of drought and defoliation on the susceptibility of eucalypts to cankers caused by Endothia gyrosa and Botryosphaeria ribis

    Energy Technology Data Exchange (ETDEWEB)

    Old, K.M.; Gibbs, R.; Craig, I.; Myers, B.J. (CSIRO, Canberra (Australia)); Yuan, Z.Q. (Xinjiang August 1st Agricultural College (China))

    1990-01-01

    Seedlings, saplings and mature eucalypts were susceptible to infection by Endothia gyrosa and Botryosphaeria ribis. Eucalyptus regnans and E. delegatensis were more susceptible than E. grandis and E. saligna. In trees not subjected to stress, cankers were limited in extent and often healed. When trees were defoliated, either manually or by severe insect attack, stem concentrations of both starch and soluble carbohydrates were reduced and canker development in some pathogen/host combinations was increased. Seedlings subjected to water stress were not predisposed to canker formation. The association of E. gyrosa with branch dieback of rural eucalypts suffering from chronic defoliation suggests that canker fungi contribute to the crown dieback syndrome in south-eastern Australia.

  17. Tamarisk Water Flux Patterns Before, During and After Episodic Defoliation by the Salt Cedar Leaf Beetle on the Colorado Plateau, USA

    Science.gov (United States)

    Hultine, K. R.; Nagler, P. L.; Dennison, P. E.

    2008-12-01

    Tamarisk (Tamarix) species are among the most successful plant invaders in the western United States, and has had significant impacts on watershed hydrology and water resources. Accordingly, local, state and federal agencies have undertaken considerable efforts to eradicate tamarisk and restore riparian habitats to pre-invasion status. A biological control - the saltcedar leaf beetle (Diorhabda elongata) - was released in the summer of 2004 at several locations in eastern Utah, USA to control the spread and impact of tamarisk within the Colorado River watershed. Beginning in April of 2008, sap flux techniques were used to monitor changes in transpiration fluxes in response to canopy defoliation by the beetle. Specifically we installed modified (10 mm length) heat dissipation probes into the main stem of 20 mature tamarisk trees within a single stand on the Colorado Plateau. In July, the saltcedar leaf beetle reduced the total leaf area to near 0% of pre-beetle invasion status. Consequently, sap flux declined by up to 80% compared to pre-beetle invasion fluxes. By mid-August, refoliation of the canopy occurred, and sap flux rates returned to pre- defoliation status. Sap flux rates prior to defoliation were modeled against atmospheric vapor pressure deficit in order to predict the amount of water salvage from defoliation. Sap flux from June 1 through September 1 was on average 36% lower than predicted values. Combined with scaling techniques, the heat dissipation approach shows a high potential for monitoring changes in watershed hydrology in response to tamarisk defoliation by the saltcedar leaf beetle. Nevertheless, tamarisk sap flux studies with heat dissipation probes presents several challenges, including, narrow sapwood depth, low flux rates in response to defoliation, and large thermal gradients that are inevitable in warm climates (particularly after defoliation removes canopy shading). We will present results from ongoing research to address these potential

  18. Hybridization of an invasive shrub affects tolerance and resistance to defoliation by a biological control agent

    Science.gov (United States)

    Williams, Wyatt I.; Friedman, Jonathan M.; Gaskin, John F.; Norton, Andrew P.

    2014-01-01

    Evolution has contributed to the successful invasion of exotic plant species in their introduced ranges, but how evolution affects particular control strategies is still under evaluation. For instance, classical biological control, a common strategy involving the utilization of highly specific natural enemies to control exotic pests, may be negatively affected by host hybridization because of shifts in plant traits, such as root allocation or chemical constituents. We investigated introgression between two parent species of the invasive shrub tamarisk (Tamarix spp.) in the western United States, and how differences in plant traits affect interactions with a biological control agent. Introgression varied strongly with latitude of origin and was highly correlated with plant performance. Increased levels of T. ramosissima introgression resulted in both higher investment in roots and tolerance to defoliation and less resistance to insect attack. Because tamarisk hybridization occurs predictably on the western U.S. landscape, managers may be able to exploit this information to maximize control efforts. Genetic differentiation in plant traits in this system underpins the importance of plant hybridization and may explain why some biological control releases are more successful than others.

  19. Compatibility of chemical insecticides and entomopathogenic fungi for control of soybean defoliating pest, Rachiplusia nu.

    Science.gov (United States)

    Pelizza, Sebastian A; Schalamuk, Santiago; Simón, María R; Stenglein, Sebastian A; Pacheco-Marino, Suani G; Scorsetti, Ana C

    2017-10-24

    Rachiplusia nu (Guenée) (Lepidoptera: Noctuidae) is one of the major lepidopteran pests defoliating soybeans (Glycine max Merrill) in Argentina. The combined use of chemical insecticides and entomopathogenic fungi is a promising pest-control option to minimize adverse chemical effects. In this work, we evaluated the interactions between five insecticides-two being considered biorational-and five fungal entomopathogenic strains under laboratory conditions in order to determine the possible usefulness of combinations of these agents against R. nu. The insecticides were tested for compatibility at four doses by in vitro bioassay and for the lethality of R. nu by inoculations at three doses. Fungal strains were applied at 1×10 8 , 1×10 6 , and 1×10 4 conidia/ml. The combinations of those insecticides with Beauveria bassiana (LPSc 1067, LPSc 1082, LPSc 1098), Metarhizium anisopliae (LPSc 907), and Metarhizium robertsii (LPSc 963) caused higher R. nu-larval mortalities than any of the individual agents alone. We observed significant differences in the in vitro conidial viability, vegetative growth, and conidia production of the five strains of entomopathogenic fungi exposed to different doses of the chemical insecticides. The combination gamma-cyhalothrin-LPSc-1067 caused the highest percent mortality of R. nu larvae, with synergism occurring between the two agents at 50% and 25% of the maximum field doses. Copyright © 2017 Asociación Argentina de Microbiología. Publicado por Elsevier España, S.L.U. All rights reserved.

  20. Potential of VIIRS Time Series Data for Aiding the USDA Forest Service Early Warning System for Forest Health Threats: A Gypsy Moth Defoliation Case Study

    Science.gov (United States)

    Spruce, Joseph P.; Ryan, Robert E.; Smoot, James; Kuper, Phillip; Prados, Donald; Russell, Jeffrey; Ross, Kenton; Gasser, Gerald; Sader, Steven; McKellip, Rodney

    2007-01-01

    This report details one of three experiments performed during FY 2007 for the NASA RPC (Rapid Prototyping Capability) at Stennis Space Center. This RPC experiment assesses the potential of VIIRS (Visible/Infrared Imager/Radiometer Suite) and MODIS (Moderate Resolution Imaging Spectroradiometer) data for detecting and monitoring forest defoliation from the non-native Eurasian gypsy moth (Lymantria dispar). The intent of the RPC experiment was to assess the degree to which VIIRS data can provide forest disturbance monitoring information as an input to a forest threat EWS (Early Warning System) as compared to the level of information that can be obtained from MODIS data. The USDA Forest Service (USFS) plans to use MODIS products for generating broad-scaled, regional monitoring products as input to an EWS for forest health threat assessment. NASA SSC is helping the USFS to evaluate and integrate currently available satellite remote sensing technologies and data products for the EWS, including the use of MODIS products for regional monitoring of forest disturbance. Gypsy moth defoliation of the mid-Appalachian highland region was selected as a case study. Gypsy moth is one of eight major forest insect threats listed in the Healthy Forest Restoration Act (HFRA) of 2003; the gypsy moth threatens eastern U.S. hardwood forests, which are also a concern highlighted in the HFRA of 2003. This region was selected for the project because extensive gypsy moth defoliation occurred there over multiple years during the MODIS operational period. This RPC experiment is relevant to several nationally important mapping applications, including agricultural efficiency, coastal management, ecological forecasting, disaster management, and carbon management. In this experiment, MODIS data and VIIRS data simulated from MODIS were assessed for their ability to contribute broad, regional geospatial information on gypsy moth defoliation. Landsat and ASTER (Advanced Spaceborne Thermal Emission

  1. Molecular characterization of the Gossypium Diversity Reference Set of the US National Cotton Germplasm Collection.

    Science.gov (United States)

    Hinze, Lori L; Fang, David D; Gore, Michael A; Scheffler, Brian E; Yu, John Z; Frelichowski, James; Percy, Richard G

    2015-02-01

    A core marker set containing markers developed to be informative within a single commercial cotton species can elucidate diversity structure within a multi-species subset of the Gossypium germplasm collection. An understanding of the genetic diversity of cotton (Gossypium spp.) as represented in the US National Cotton Germplasm Collection is essential to develop strategies for collecting, conserving, and utilizing these germplasm resources. The US collection is one of the largest world collections and includes not only accessions with improved yield and fiber quality within cultivated species, but also accessions possessing sources of abiotic and biotic stress resistance often found in wild species. We evaluated the genetic diversity of a subset of 272 diploid and 1,984 tetraploid accessions in the collection (designated the Gossypium Diversity Reference Set) using a core set of 105 microsatellite markers. Utility of the core set of markers in differentiating intra-genome variation was much greater in commercial tetraploid genomes (99.7 % polymorphic bands) than in wild diploid genomes (72.7 % polymorphic bands), and may have been influenced by pre-selection of markers for effectiveness in the commercial species. Principal coordinate analyses revealed that the marker set differentiated interspecific variation among tetraploid species, but was only capable of partially differentiating among species and genomes of the wild diploids. Putative species-specific marker bands in G. hirsutum (73) and G. barbadense (81) were identified that could be used for qualitative identification of misclassifications, redundancies, and introgression within commercial tetraploid species. The results of this broad-scale molecular characterization are essential to the management and conservation of the collection and provide insight and guidance in the use of the collection by the cotton research community in their cotton improvement efforts.

  2. Construction of a complete set of alien chromosome addition lines from Gossypium australe in Gossypium hirsutum: morphological, cytological, and genotypic characterization.

    Science.gov (United States)

    Chen, Yu; Wang, Yingying; Wang, Kai; Zhu, Xiefei; Guo, Wangzhen; Zhang, Tianzhen; Zhou, Baoliang

    2014-05-01

    We report the first complete set of alien addition lines of G. hirsutum . The characterized lines can be used to introduce valuable traits from G. australe into cultivated cotton. Gossypium australe is a diploid wild cotton species (2n = 26, GG) native to Australia that possesses valuable characteristics unavailable in the cultivated cotton gene pool, such as delayed pigment gland morphogenesis in the seed and resistances to pests and diseases. However, it is very difficult to directly transfer favorable traits into cultivated cotton through conventional gene recombination due to the absence of pairing and crossover between chromosomes of G. australe and Gossypium hirsutum (2n = 52, AADD). To enhance the transfer of favorable genes from wild species into cultivated cotton, we developed a set of hirsutum-australe monosomic alien chromosome addition lines (MAAL) using a combination of morphological survey, microsatellite marker-assisted selection, and molecular cytogenetic analysis. The amphidiploid (2n = 78, AADDGG) of G. australe and G. hirsutum was consecutively backcrossed with upland cotton to develop alien addition lines of individual G. australe chromosomes in G. hirsutum. From these backcross progeny, we generated the first complete set of chromosome addition lines in cotton; 11 of 13 lines are monosomic additions, and chromosomes 7G(a) and 13G(a) are multiple additions. MAALs of 1G(a) and 11G(a) were the first to be isolated. The chromosome addition lines can be employed as bridges for the transfer of desired genes from G. australe into G. hirsutum, as well as for gene assignment, isolation of chromosome-specific probes, flow sorting and microdissection of chromosome, development of chromosome-specific ''paints'' for fluorochrome-labeled DNA fragments, physical mapping, and selective isolation and mapping of cDNAs for a particular G. australe chromosome.

  3. Simple Sequence Repeat (SSR Genetic Linkage Map of D Genome Diploid Cotton Derived from an Interspecific Cross between Gossypium davidsonii and Gossypium klotzschianum

    Directory of Open Access Journals (Sweden)

    Joy Nyangasi Kirungu

    2018-01-01

    Full Text Available The challenge in tetraploid cotton cultivars is the narrow genetic base and therefore, the bottleneck is how to obtain interspecific hybrids and introduce the germplasm directly from wild cotton to elite cultivars. Construction of genetic maps has provided insight into understanding the genome structure, interrelationships between organisms in relation to evolution, and discovery of genes that carry important agronomic traits in plants. In this study, we generated an interspecific hybrid between two wild diploid cottons, Gossypium davidsonii and Gossypium klotzschianum, and genotyped 188 F2:3 populations in order to develop a genetic map. We screened 12,560 SWU Simple Sequence Repeat (SSR primers and obtained 1000 polymorphic markers which accounted for only 8%. A total of 928 polymorphic primers were successfully scored and only 728 were effectively linked across the 13 chromosomes, but with an asymmetrical distribution. The map length was 1480.23 cM, with an average length of 2.182 cM between adjacent markers. A high percentage of the markers on the map developed, and for the physical map of G. raimondii, exhibited highly significant collinearity, with two types of duplication. High level of segregation distortion was observed. A total of 27 key genes were identified with diverse roles in plant hormone signaling, development, and defense reactions. The achievement of developing the F2:3 population and its genetic map constructions may be a landmark in establishing a new tool for the genetic improvement of cultivars from wild plants in cotton. Our map had an increased recombination length compared to other maps developed from other D genome cotton species.

  4. Embryogenèse somatique chez le cotonnier ( Gossypium hirsutum L ...

    African Journals Online (AJOL)

    L'implication des lipides dans le processus de l'embryogenèse somatique a été étudiée chez deux variétés de cotonnier (Gossypium hirsutum L.) : Coker 312, variété embryogène et ISA 205N, variété non embryogène. Le taux de lipides totaux de la variété ISA 205N est en général plus élevé que celui de la variété Coker ...

  5. Wood ants and a geometrid defoliator of birch: predation outweighs beneficial effects through the host plant.

    Science.gov (United States)

    Karhu, Kari J; Neuvonen, Seppo

    1998-02-01

    Soil amelioration by a wood-ant species and its consequences for the larval performance of autumnal moths feeding on mountain birch were studied at various distances from the nest mound. Soil nitrate and ammonium nitrogen did not show any clear relationship with distance. However, trees growing in the mound had over 20% more foliar nitrogen than more distant trees. When moth larvae were experimentally protected from predation, their survival rate and final weight tended to decrease with increasing distance. In a laboratory experiment with detached leaves, the relative growth rate of larvae was roughly 30% higher on leaves from trees located on the mound. Differences in larval performance refute the Plant Stress Hypothesis proposed by T.C.R. White and support P.W. Price's Plant Vigor Hypothesis. Predation by ants was examined along the same gradient in trees with and without a glue band that excluded ants from the canopy. Reduction in the daily survival rate of larvae attributable to ant predation was about 35% in trees growing in the mound and around 5% at a distance of 20 m. Other things being equal, about 25 times more larvae entering the penultimate instar would achieve the pupal stage outside the wood-ant territory than in the vicinity of the mound. While both the fertilizing and predatory influence of wood ants is clear, the domain of predation is much larger than the area where trees and their herbivores can exploit enhanced nutrient levels in and around ant mounds. The existence of undamaged green islands around ant mounds in otherwise totally defoliated mountain-birch forests cannot be explained by soil amelioration by wood ants but rather by their predatory activity.

  6. Foraging behaviour of the exotic wasp Vespula germanica (Hymenoptera: Vespidae) on a native caterpillar defoliator.

    Science.gov (United States)

    Pietrantuono, A L; Moreyra, S; Lozada, M

    2017-09-19

    Vespula germanica is a social wasp and an opportunistic predator. While foraging, these wasps learn and integrate different kinds of cues. They have successfully invaded many parts of the world, including native Nothofagus and Lophozonia forests located in the Andean-Patagonian region, where they forage on native arthropods. Perzelia arda, a lepidopteron defoliator of Lophozonia obliqua, uses the foliage to hide in and feed on. The purpose of this work is to study whether V. germanica use olfactory cues when foraging on P. arda. To do this, we used a Y-tube olfactometer and established three treatments to compare pairs of all combinations of stimuli (larvae, leaves with larval traces, and leaves without larval traces) and controls. Data were analysed via two developed models that showed decisions made by V. germanica and allowed to establish a scale of preferences between the stimuli. The analysis demonstrates that V. germanica wasps choose P. arda as larval prey and are capable of discriminating between the offered stimuli (deviance information criterion (DIC) null model = 873.97; DIC simple model = 84.5, n = 152). According to the preference scale, V. germanica preferred leaves with traces of larvae, suggesting its ability to associate these traces with the presence of the prey. This may be because, under natural conditions, larvae are never exposed outside their shelters of leaves and therefore V. germanica uses indirect signals. The presence of V. germanica foraging on P. arda highlights the flexible foraging behaviour of this wasp which may also act as a positive biological control, reducing lepidopteran populations.

  7. Species of Lepidoptera defoliators of Eucalyptus as new host for the parasitoid Palmistichus elaeisis (Hymenoptera: Eulophidae

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    Fabricio Fagundes Pereira

    2008-04-01

    Full Text Available Pupae of Thyrinteina arnobia (Stoll and Thyrinteina leucoceraea Rindge (Lepidoptera: Geometridae were obtained from Eucalyptus cloeziana F. Muell and Eucalyptus urophylla S.T. Blake plants, respectively. Specimens of a parasitoid emerged from T. arnobia pupae and also found parasitising T. leucoceraea pupae in the field were identified as Palmistichus elaeisis Delvare and LaSalle (Hymenoptera: Eulophidae. This is the first report on P. elaeisis parasitizing T. arnobia and T. leucoceraea pupae in natural conditions in Brazil. P. elaeisis also parasitized these hosts and Bombyx mori Linnaeus (Lepidoptera: Bombycidae, Anticarsia gemmatalis Hubner, Pseudaletia sequax Franclemont, Alabama argillacea Huebner (Lepidoptera: Noctuidae, Dirphia moderata Bouvier (Lepidoptera: Saturniidae and Halysidota pearsoni Watson (Lepidoptera: Arctiidae in the laboratory. The production and release of P. elaeisis could be an efficient alternative for controlling Lepidoptera defoliators in eucalyptus plantations.Pupas de Thyrinteina arnobia (Stoll e Thyrinteina leucoceraea Rindge (Lepidoptera: Geometridae foram coletadas em Eucalyptus cloeziana F. Muell e Eucalyptus urophylla S.T. Blake, respectivamente. Espécimes de Palmistichus elaeisis Delvare and LaSalle (Hymenoptera: Eulophidae emergiram de T. arnobia e foram encontrados sobre pupas de T. leucoceraea em plantas de eucalipto no campo. Esse é o primeiro relato de P. elaeisis parasitando pupas de T. arnobia e T. leucoceraea em condições naturais no Brasil. Além desses hospedeiros, P. elaeisis parasitou em laboratório Bombyx mori Linnaeus (Lepidoptera: Bombycidae, Anticarsia gemmatalis Hubner, Pseudaletia sequax Franclemont, Alabama argillacea Huebner (Lepidoptera: Noctuidae, Dirphia moderata Bouvier (Lepidoptera: Saturniidae e Halysidota pearsoni Watson (Lepidoptera: Arctiidae. A produção de P. elaeisis e sua liberação em eucaliptais podem representar uma alternativa eficiente de controle de lagartas

  8. Morphogenesis of dwarf elephant grass clones in response to intensity and frequency of defoliation in dry and rainy seasons

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    Carlos Augusto de Miranda Gomide

    2011-07-01

    Full Text Available The aim of this study was to evaluate during the dry and rainy seasons the morphogenesis traits of two clones of dwarf elephant grass under different management strategies. The study was conducted in a factorial 2 × 2 × 3 design, using two clones, one green and one purple, two residual heights, 25 and 45 cm, and three frequencies of defoliation according to the light interception of 90, 95 and 100%. The design was a randomized block with three replications. The variables were leaf elongation and leaf senescence rate, stem elongation rate and phyllochron. The leaf lifespan and the number of living leaves per tiller were also estimated. The clones presented low stem elongation rates, showing adaptation for grazing use. In the rainy season, the light interception of 100% promoted the highest stem elongation rate and increased the leaf senescence rate. In the dry season, the leaf elongation rate (LER was higher for the purple clone than for the green one (23 vs 15 mm.tiller-1.day-1. In the rainy season, the LER of the green clone exceeded that of the purple one by 71% (149 vs. 87 mm.tiller-1.day-1. The phyllochron varied among clones only in the rainy season, when the value was 4.6 days.leaf-1 for the green clone and 8.4 days.leaf-1 for the purple one; both of these values are below the mean value observed during the drought (21,6 days.leaf-1. The residual heights did not affect, in an isolated way, any of the variables. The clones are well adapted to grazing, presenting low stem elongation rates. The interval between defoliations should consider the scope of light interception between 90 and 95%. The green clone, with a greater flow of biomass, requires handling with shorter defoliation intervals.

  9. Phylogeny of the New World diploid cottons (Gossypium L., Malvaceae) based on sequences of three low-copy nuclear genes.

    Science.gov (United States)

    I. Alvarez; R. Cronn; J.F. Wendel

    2005-01-01

    American diploid cottons (Gossypium L., subgenus Houzingenia Fryxell) form a monophyletic group of 13 species distributed mainly in western Mexico, extending into Arizona, Baja California, and with one disjunct species each in the Galapagos Islands and Peru. Prior phylogenetic analyses based on an alcohol dehydrogenase gene (...

  10. Cotton (Gossypium hirsutum L.) boll rotting bacteria vectored by the brown stink bug, Euschistus servus (Say) (Hemiptera: Pentatomidea)

    Science.gov (United States)

    Determine the capacity of the brown stink bug (Euschistus servus) to transmit an infective Pantoea agglomerans into cotton (Gossypium hirsutum, L.) bolls. A laboratory colony of the brown stink bug (BSB) was maintained on fresh green beans. The P. agglomerans mutant strain Sc 1-R that holds rifamp...

  11. Phosphorus and Defoliation Interact and Improve the Growth and Composition of the Plant Community and Soil Properties in an Alpine Pasture of Qinghai-Tibet Plateau.

    Science.gov (United States)

    Qi, Juan; Nie, Zhongnan; Jiao, Ting; Zhang, Degang

    2015-01-01

    Pasture degradation caused by overgrazing and inappropriate fertiliser management is a major production and environmental threat in Qinghai-Tibet Plateau. Previous research has focused on the effects of mixed nitrogen (N) and phosphorus (P) fertiliser and reduced grazing pressure on the plant community of the grassland; however, the role of P and how it interacts with various defoliation (the process of the complete or partial removal of the above-ground parts of plants by grazing or cutting) intensities on the plant and soil of the grassland ecosystem have not been quantified. A field experiment was conducted to quantify how P application in combination of defoliation pressure could impact the dynamic change of the plant and soil in a native alpine grassland ecosystem of the Qinghai-Tibet Plateau, China, from May 2012 to September 2014. A split-plot design with 4 replicates and repeated measures was used to determine the growth and composition of plant community and soil physical and chemical properties under various levels of P fertiliser and defoliation intensity. The results showed that applying 20 kg P/ha increased the herbage yield of Melissitus ruthenica by 68% and total pasture yield by 25%. Close defoliation favoured the growth and plant frequency of the shorter species, whereas lax defoliation favoured that of the taller plant species. Medium P rate and cutting to 3 cm above ground gave an overall best outcome in pasture yield, quality and frequency and soil moisture and nutrient concentration. Application of P fertiliser with a moderate defoliation pressure to promote legume growth and N fixation has the potential to achieve multiple benefits in increasing pasture and livestock production and improving environmental sustainability in the alpine pasture of Qinghai-Tibet Plateau, a fragile and P-deficient ecosystem zone in China and its western neighbouring countries.

  12. Metabolic and enzymatic changes associated with carbon mobilization, utilization and replenishment triggered in grain amaranth (Amaranthus cruentus in response to partial defoliation by mechanical injury or insect herbivory

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    Castrillón-Arbeláez Paula

    2012-09-01

    Full Text Available Abstract Background Amaranthus cruentus and A. hypochondriacus are crop plants grown for grain production in subtropical countries. Recently, the generation of large-scale transcriptomic data opened the possibility to study representative genes of primary metabolism to gain a better understanding of the biochemical mechanisms underlying tolerance to defoliation in these species. A multi-level approach was followed involving gene expression analysis, enzyme activity and metabolite measurements. Results Defoliation by insect herbivory (HD or mechanical damage (MD led to a rapid and transient reduction of non-structural carbohydrates (NSC in all tissues examined. This correlated with a short-term induction of foliar sucrolytic activity, differential gene expression of a vacuolar invertase and its inhibitor, and induction of a sucrose transporter gene. Leaf starch in defoliated plants correlated negatively with amylolytic activity and expression of a β-amylase-1 gene and positively with a soluble starch synthase gene. Fatty-acid accumulation in roots coincided with a high expression of a phosphoenolpyruvate/phosphate transporter gene. In all tissues there was a long-term replenishment of most metabolite pools, which allowed damaged plants to maintain unaltered growth and grain yield. Promoter analysis of ADP-glucose pyrophosphorylase and vacuolar invertase genes indicated the presence of cis-regulatory elements that supported their responsiveness to defoliation. HD and MD had differential effects on transcripts, enzyme activities and metabolites. However, the correlation between transcript abundance and enzymatic activities was very limited. A better correlation was found between enzymes, metabolite levels and growth and reproductive parameters. Conclusions It is concluded that a rapid reduction of NSC reserves in leaves, stems and roots followed by their long-term recovery underlies tolerance to defoliation in grain amaranth. This requires the

  13. First occurrence of Alcaeorrhynchus grandis (Dallas) (Hemiptera: Pentatomidae) preying on defoliating caterpillars of oil palm in the state of Para, Brazil

    International Nuclear Information System (INIS)

    Ribeiro, Rafael C.; Lemos, Walkymario P.; Muller, Antonio A.

    2010-01-01

    The oil palm Elaeis guineensis is usually attacked by pests, particularly, defoliating caterpillars. Between 2004 and 2006 a stinkbug predator (Asopinae) was registered preying on caterpillars of Brassolis sophorae L., Opsiphanes invirae Hubner (Lepidoptera: Nymphalidae) and Sibine spp. (Lepidoptera: Limacodidae), reducing their populations in commercial oil palm plantations in the State of Para, Brazil. Specimens of the natural enemy were collected, mounted, and identified as Alcaeorrhynchus grandis (Dallas) (Hemiptera: Pentatomidae), corresponding to the first report of the occurrence of this stinkbug attacking defoliating caterpillars of oil palm in Brazil. (author)

  14. GraP: platform for functional genomics analysis of Gossypium raimondii.

    Science.gov (United States)

    Zhang, Liwei; Guo, Jinyan; You, Qi; Yi, Xin; Ling, Yi; Xu, Wenying; Hua, Jinping; Su, Zhen

    2015-01-01

    Cotton (Gossypium spp.) is one of the most important natural fiber and oil crops worldwide. Improvement of fiber yield and quality under changing environments attract much attention from cotton researchers; however, a functional analysis platform integrating omics data is still missing. The success of cotton genome sequencing and large amount of available transcriptome data allows the opportunity to establish a comprehensive analysis platform for integrating these data and related information. A comprehensive database, Platform of Functional Genomics Analysis in Gossypium raimondii (GraP), was constructed to provide multi-dimensional analysis, integration and visualization tools. GraP includes updated functional annotation, gene family classifications, protein-protein interaction networks, co-expression networks and microRNA-target pairs. Moreover, gene set enrichment analysis and cis-element significance analysis tools are also provided for gene batch analysis of high-throughput data sets. Based on these effective services, GraP may offer further information for subsequent studies of functional genes and in-depth analysis of high-throughput data. GraP is publically accessible at http://structuralbiology.cau.edu.cn/GraP/, with all data available for downloading. © The Author(s) 2015. Published by Oxford University Press.

  15. Intervalo e intensidade de desfolhação nas taxas de crescimento, senescência e desfolhação e no equilíbrio de gramíneas em associação Interval and intensity of defoliation on the growth, senescence and defoliation fluxes and equilibrium of associated grasses

    Directory of Open Access Journals (Sweden)

    Andréa Machado Groff

    2002-09-01

    Full Text Available O experimento foi realizado no INRA (Institut National de la Recherche Agronomique em Theix, França. Duas gramíneas (azevém perene e festucaforam semeadas em caixas (0,13 m² e submetidas a três intervalos (3,5, 7 e 14 dias e três intensidades (160, 320 e 640 bocados.m-2 a cada desfolhação de desfolhação, com quatro repetições por tratamento. Quatro meses após a semeadura, a cada data de desfolhação, as caixas foram oferecidas, individualmente, a quatro ovelhas secas e retiradas após a realização de um determinado número de bocados. Para cada gramínea foram estudadas as taxas de crescimento, senescência e desfolhação. Os resultados mostraram que o intervalo e a intensidade de desfolhação tiveram efeitos diferenciados nas taxas de crescimento, senescência e desfolhação e no equilíbrio da associação.The experiment was carried in INRA (Institut National de la Recherche Agronomique at Theix, France. Two grasses (perennial ryegrass and tall fescue were grown in sward boxes (0,13 m² and submitted to three defoliation intervals (3,5, 7 and 14 days between two successive defoliation and three defoliation intensities (160, 320 and 640 bites.m-2 at each defoliation. Four months after sowing, at defoliation date, sward boxes were offered to four individual dry ewes and removed after a given number of bites had been taken. For each grass species, the growth, senescence and defoliation fluxes were studied. The results showed that the interval and the intensity of grazing had distinct effects on the growth, senescence and defoliation fluxes as well as on the equilibrium of grass mixtures.

  16. Asynchrony between Host Plant and Insects-Defoliator within a Tritrophic System: The Role of Herbivore Innate Immunity.

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    Vyacheslav V Martemyanov

    Full Text Available The effects of asynchrony in the phenology of spring-feeding insect-defoliators and their host plants on insects' fitness, as well as the importance of this effect for the population dynamics of outbreaking species of insects, is a widespread and well-documented phenomenon. However, the spreading of this phenomenon through the food chain, and especially those mechanisms operating this spreading, are still unclear. In this paper, we study the effect of seasonally declined leafquality (estimated in terms of phenolics and nitrogen content on herbivore fitness, immune parameters and resistance against pathogen by using the silver birch Betula pendula--gypsy moth Lymantria dispar--nucleopolyhedrovirus as the tritrophic system. We show that a phenological mismatch induced by the delay in the emergence of gypsy moth larvae and following feeding on mature leaves has negative effects on the female pupal weight, on the rate of larval development and on the activity of phenoloxidase in the plasma of haemolymph. In addition, the larval susceptibility to exogenous nucleopolyhydrovirus infection as well as covert virus activation were both enhanced due to the phenological mismatch. The observed effects of phenological mismatch on insect-baculovirus interaction may partially explain the strong and fast fluctuations in the population dynamics of the gypsy moth that is often observed in the studied part of the defoliator area. This study also reveals some indirect mechanisms of effect related to host plant quality, which operate through the insect innate immune status and affect resistance to both exogenous and endogenous virus.

  17. Exp2 polymorphisms associated with variation for fiber quality properties in cotton (Gossypium spp.

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    Daohua He

    2014-10-01

    Full Text Available Plant expansins are a group of extracellular proteins thought to affect the quality of cotton fibers. Previous expression profile analysis revealed that six Expansin A genes are present in cotton, of which two (GhExp1 and GhExp2 produce transcripts that are specific to the developing cotton fiber. To identify the phenotypic function of Exp2, and to determine whether nucleotide variation among alleles of Exp2 affects fiber quality, candidate gene association mapping was conducted. Gene-specific primers were designed to amplify the Exp2 gene. By amplicon sequencing, the nucleotide diversity of Exp2 was investigated across 92 accessions (including 7 Gossypium arboreum, 74 Gossypium hirsutum, and 11 Gossypium barbadense accessions with different fiber qualities. Twenty-six SNPs and seven InDels including 14 from the coding region of Exp2 were detected, forming twelve distinct haplotypes in the cotton collection. Among the 14 SNPs in the coding region, five were missense mutations and nine were synonymous nucleotide changes. The average SNP/InDel per nucleotide ratio was 2.61% (one SNP per 39 bp, with 1.81 and 3.87% occurring in coding and non-coding regions, respectively. Nucleotide and haplotype diversity across the entire Exp2 region was 0.00603 (π and 0.844, respectively, and diversity in non-coding regions was higher than that in coding regions. For linkage disequilibrium (LD, the mean r2 value for all polymorphism loci pairs was 0.48, and LD did not decay over 748 bp. Based on 132 simple sequence repeat (SSR loci evenly covering 26 chromosomes, the population structure was estimated, and the accessions were divided into seven groups that agreed well with their genomic origin and evolutionary history. A general linear model was used to calculate the Exp2-wide diversity–trait associations of 5 fiber quality traits, considering population structure (Q. Four SNPs in Exp2 were associated with at least one of the fiber quality traits, but not with

  18. Spectral mixture analysis to monitor defoliation in mixed-aged Eucalyptus globulus Labill plantations in southern Australia using Landsat 5-TM and EO-1 Hyperion data

    NARCIS (Netherlands)

    Somers, B.; Verbesselt, J.; Ampe, E.M.; Sims, N.; Verstraeten, W.W.; Coppin, P.

    2010-01-01

    Defoliation is a key parameter of forest health and is associated with reduced productivity and tree mortality. Assessing the health of forests requires regular observations over large areas. Satellite remote sensing provides a cost-effective alternative to traditional ground-based assessment of

  19. Effect of defoliation frequency and height of cutting on growth, dry matter yield and nutritive value of Napier grass (Pennisetum purpureum (L.) Schumach)

    NARCIS (Netherlands)

    Tessema, Z.K.; Mihret, J.; Solomon, M.

    2010-01-01

    Growth characteristics, dry-matter (DM) yield, chemical components and in vitro dry-matter digestibility (IVDMD) of Napier grass were studied in a randomized complete block design with three replications at Haramaya University, Ethiopia. The treatments were three defoliation frequencies (60, 90 and

  20. Historical patterns of spruce budworm defoliation and bark beetle outbreaks in North American conifer forests: an atlas and description of digital maps

    Science.gov (United States)

    David W. Williams; Richard A. Birdsey

    2003-01-01

    This atlas presents maps of historical defoliation by the eastern and western spruce budworms and historical outbreaks of the mountain and southern pine beetles during the past half century. The maps encompass various regions of the conterminous United States and eastern Canada. This publication also serves as documentation for an extended set of digital maps, which...

  1. Sap flux-scaled transpiration by tamarisk (Tamarix spp.) before, during and after episodic defoliation by the saltcedar leaf beetle (Diorhabda carinulata)

    Science.gov (United States)

    Hultine, K.R.; Nagler, P.L.; Morino, K.; Bush, S.E.; Burtch, K.G.; Dennison, P.E.; Glenn, E.P.; Ehleringer, J.R.

    2010-01-01

    The release of the saltcedar beetle (Diorhabda carinulata) has resulted in the periodic defoliation of tamarisk (Tamarix spp.) along more than 1000 river km in the upper Colorado River Basin and is expected to spread along many other river reaches throughout the upper basin, and possibly into the lower Colorado River Basin. Identifying the impacts of these release programs on tamarisk water use and subsequent water cycling in arid riparian systems are largely unknown, due in part to the difficulty of measuring water fluxes in these systems. We used lab-calibrated, modified heat-dissipation sap flux sensors to monitor tamarisk water use (n=20 trees) before, during and after defoliation by the saltcedar leaf beetle during the 2008 and 2009 growing seasons (May-October) in southeastern Utah. We incorporated a simple model that related mean stem sap flux density (Js) with atmospheric vapor pressure deficit (vpd) before the onset of defoliation in 2008. The model was used to calculate differences between predicted Js and Js measured throughout the two growing seasons. Episodic defoliation resulted in a 16% reduction in mean annual rates of Js in both 2008 and 2009, with decreases occurring only during the periods in which the trees were defoliated (about 6-8 weeks per growing season). In other words, rates of Js rebounded to values predicted by the model when the trees produced new leaves after defoliation. Sap flux data were scaled to stand water use by constructing a tamarisk-specific allometric equation to relate conducting sapwood area to stem diameter, and by measuring the size distribution of stems within the stand. Total water use in both years was 0.224m, representing a reduction of about 0.04myr-1. Results showed that repeated defoliation/refoliation cycles did not result in a progressive decrease in either leaf production or water use over the duration of the study. This investigation improves ground-based estimates of tamarisk water use, and will support

  2. Sequencing of allotetraploid cotton (Gossypium hirsutum L. acc. TM-1) provides a resource for fiber improvement.

    Science.gov (United States)

    Zhang, Tianzhen; Hu, Yan; Jiang, Wenkai; Fang, Lei; Guan, Xueying; Chen, Jiedan; Zhang, Jinbo; Saski, Christopher A; Scheffler, Brian E; Stelly, David M; Hulse-Kemp, Amanda M; Wan, Qun; Liu, Bingliang; Liu, Chunxiao; Wang, Sen; Pan, Mengqiao; Wang, Yangkun; Wang, Dawei; Ye, Wenxue; Chang, Lijing; Zhang, Wenpan; Song, Qingxin; Kirkbride, Ryan C; Chen, Xiaoya; Dennis, Elizabeth; Llewellyn, Danny J; Peterson, Daniel G; Thaxton, Peggy; Jones, Don C; Wang, Qiong; Xu, Xiaoyang; Zhang, Hua; Wu, Huaitong; Zhou, Lei; Mei, Gaofu; Chen, Shuqi; Tian, Yue; Xiang, Dan; Li, Xinghe; Ding, Jian; Zuo, Qiyang; Tao, Linna; Liu, Yunchao; Li, Ji; Lin, Yu; Hui, Yuanyuan; Cao, Zhisheng; Cai, Caiping; Zhu, Xiefei; Jiang, Zhi; Zhou, Baoliang; Guo, Wangzhen; Li, Ruiqiang; Chen, Z Jeffrey

    2015-05-01

    Upland cotton is a model for polyploid crop domestication and transgenic improvement. Here we sequenced the allotetraploid Gossypium hirsutum L. acc. TM-1 genome by integrating whole-genome shotgun reads, bacterial artificial chromosome (BAC)-end sequences and genotype-by-sequencing genetic maps. We assembled and annotated 32,032 A-subgenome genes and 34,402 D-subgenome genes. Structural rearrangements, gene loss, disrupted genes and sequence divergence were more common in the A subgenome than in the D subgenome, suggesting asymmetric evolution. However, no genome-wide expression dominance was found between the subgenomes. Genomic signatures of selection and domestication are associated with positively selected genes (PSGs) for fiber improvement in the A subgenome and for stress tolerance in the D subgenome. This draft genome sequence provides a resource for engineering superior cotton lines.

  3. Association mapping analysis of fiber yield and quality traits in Upland cotton (Gossypium hirsutum L.).

    Science.gov (United States)

    Ademe, Mulugeta Seyoum; He, Shoupu; Pan, Zhaoe; Sun, Junling; Wang, Qinglian; Qin, Hongde; Liu, Jinhai; Liu, Hui; Yang, Jun; Xu, Dongyong; Yang, Jinlong; Ma, Zhiying; Zhang, Jinbiao; Li, Zhikun; Cai, Zhongmin; Zhang, Xuelin; Zhang, Xin; Huang, Aifen; Yi, Xianda; Zhou, Guanyin; Li, Lin; Zhu, Haiyong; Pang, Baoyin; Wang, Liru; Jia, Yinhua; Du, Xiongming

    2017-12-01

    Fiber yield and quality are the most important traits for Upland cotton (Gossypium hirsutum L.). Identifying high yield and good fiber quality genes are the prime concern of researchers in cotton breeding. Association mapping offers an alternative and powerful method for detecting those complex agronomic traits. In this study, 198 simple sequence repeats (SSRs) were used to screen markers associated with fiber yield and quality traits with 302 elite Upland cotton accessions that were evaluated in 12 locations representing the Yellow River and Yangtze River cotton growing regions of China. Three subpopulations were found after the estimation of population structure. The pair-wise kinship values varied from 0 to 0.867. Only 1.59% of the total marker locus pairs showed significant linkage disequilibrium (LD, p cotton molecular breeding programs.

  4. RNA interference for functional genomics and improvement of cotton (Gossypium spp.

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    Ibrokhim Y. Abdurakhmonov

    2016-02-01

    Full Text Available RNA interference (RNAi, is a powerful new technology in the discovery of genetic sequence functions, and has become a valuable tool for functional genomics of cotton (Gossypium ssp.. The rapid adoption of RNAi has replaced previous antisense technology. RNAi has aided in the discovery of function and biological roles of many key cotton genes involved in fiber development, fertility and somatic embryogenesis, resistance to important biotic and abiotic stresses, and oil and seed quality improvements as well as the key agronomic traits including yield and maturity. Here, we have comparatively reviewed seminal research efforts in previously used antisense approaches and currently applied breakthrough RNAi studies in cotton, analyzing developed RNAi methodologies, achievements, limitations, and future needs in functional characterizations of cotton genes. We also highlighted needed efforts in the development of RNAi-based cotton cultivars, and their safety and risk assessment, small and large-scale field trials, and commercialisation.

  5. The Complete Mitochondrial Genome of Gossypium hirsutum and Evolutionary Analysis of Higher Plant Mitochondrial Genomes

    Science.gov (United States)

    Su, Aiguo; Geng, Jianing; Grover, Corrinne E.; Hu, Songnian; Hua, Jinping

    2013-01-01

    Background Mitochondria are the main manufacturers of cellular ATP in eukaryotes. The plant mitochondrial genome contains large number of foreign DNA and repeated sequences undergone frequently intramolecular recombination. Upland Cotton (Gossypium hirsutum L.) is one of the main natural fiber crops and also an important oil-producing plant in the world. Sequencing of the cotton mitochondrial (mt) genome could be helpful for the evolution research of plant mt genomes. Methodology/Principal Findings We utilized 454 technology for sequencing and combined with Fosmid library of the Gossypium hirsutum mt genome screening and positive clones sequencing and conducted a series of evolutionary analysis on Cycas taitungensis and 24 angiosperms mt genomes. After data assembling and contigs joining, the complete mitochondrial genome sequence of G. hirsutum was obtained. The completed G.hirsutum mt genome is 621,884 bp in length, and contained 68 genes, including 35 protein genes, four rRNA genes and 29 tRNA genes. Five gene clusters are found conserved in all plant mt genomes; one and four clusters are specifically conserved in monocots and dicots, respectively. Homologous sequences are distributed along the plant mt genomes and species closely related share the most homologous sequences. For species that have both mt and chloroplast genome sequences available, we checked the location of cp-like migration and found several fragments closely linked with mitochondrial genes. Conclusion The G. hirsutum mt genome possesses most of the common characters of higher plant mt genomes. The existence of syntenic gene clusters, as well as the conservation of some intergenic sequences and genic content among the plant mt genomes suggest that evolution of mt genomes is consistent with plant taxonomy but independent among different species. PMID:23940520

  6. Extensive and biased intergenomic nonreciprocal DNA exchanges shaped a nascent polyploid genome, Gossypium (cotton).

    Science.gov (United States)

    Guo, Hui; Wang, Xiyin; Gundlach, Heidrun; Mayer, Klaus F X; Peterson, Daniel G; Scheffler, Brian E; Chee, Peng W; Paterson, Andrew H

    2014-08-01

    Genome duplication is thought to be central to the evolution of morphological complexity, and some polyploids enjoy a variety of capabilities that transgress those of their diploid progenitors. Comparison of genomic sequences from several tetraploid (AtDt) Gossypium species and genotypes with putative diploid A- and D-genome progenitor species revealed that unidirectional DNA exchanges between homeologous chromosomes were the predominant mechanism responsible for allelic differences between the Gossypium tetraploids and their diploid progenitors. Homeologous gene conversion events (HeGCEs) gradually subsided, declining to rates similar to random mutation during radiation of the polyploid into multiple clades and species. Despite occurring in a common nucleus, preservation of HeGCE is asymmetric in the two tetraploid subgenomes. At-to-Dt conversion is far more abundant than the reciprocal, is enriched in heterochromatin, is highly correlated with GC content and transposon distribution, and may silence abundant A-genome-derived retrotransposons. Dt-to-At conversion is abundant in euchromatin and genes, frequently reversing losses of gene function. The long-standing observation that the nonspinnable-fibered D-genome contributes to the superior yield and quality of tetraploid cotton fibers may be explained by accelerated Dt to At conversion during cotton domestication and improvement, increasing dosage of alleles from the spinnable-fibered A-genome. HeGCE may provide an alternative to (rare) reciprocal DNA exchanges between chromosomes in heterochromatin, where genes have approximately five times greater abundance of Dt-to-At conversion than does adjacent intergenic DNA. Spanning exon-to-gene-sized regions, HeGCE is a natural noninvasive means of gene transfer with the precision of transformation, potentially important in genetic improvement of many crop plants. Copyright © 2014 by the Genetics Society of America.

  7. Characterization of a cDNA encoding metallothionein 3 from cotton (Gossypium hirsutum L.).

    Science.gov (United States)

    Jordan, Robin H; Turley, Rickie B; Defauw, Sherri L; Steele, Mark

    2005-04-01

    A cDNA encoding metallothionein (MT) was isolated from a library constructed with poly A(+) RNA purified from 48 h etiolated cotton (Gossypium hirsutum L.) cotyledons. This cDNA encodes a deduced protein with 63 residues and a molecular weight of 6.3 kDa. The protein has 10 cysteines of which 4 are within the CXXCXCXXXXXC amino-terminus motif and six are within the CXCXXXCXCXXCXC carboxyl-terminus motif characteristic of the type III MT (MT3). The cotton MT3 protein sequence is 76.2, 69.8, 66.7, 60.3 and 33.5% identical to MT3 from Carica papaya, Rubus idaeus, Ribes nigrum, Citrus unshiu, and Gossypium hirsutum type I MT, respectively. A fusion protein was constructed by producing PCR primers for the 5' and 3' ends of the cotton MT3 cDNA and ligating the PCR product inframe at the 3' end of a bacterial glutathione S-transferase (GST) gene in the pGEX3 vector. The 5' PCR primer incorporated a segment of the cotton MT3 noncoding region, resulting in an addition of 9 residues to the MT3 (after Factor Xa digestion site) which increased the size of the expressed protein to 72 residues and 7.6 kDa. Expression of the 7.6 kDa protein in bacteria was confirmed by SDS-PAGE. Induction and accumulation of the GST-MT3 protein began inhibiting bacterial growth after 1 h. Addition of Cu (1 muM to 1 mM), 1 mM cysteine, or 1 mM cystine to the media did not rescue growth. Additionally, this protein was evaluated for its ability to bind Cd, Cu, Ni and Zn in the bacterial expression system. We found that cotton MT3 preferentially binds Cu.

  8. Duplication, divergence and persistence in the Phytochrome photoreceptor gene family of cottons (Gossypium spp.

    Directory of Open Access Journals (Sweden)

    Abdukarimov Abdusattor

    2010-06-01

    Full Text Available Abstract Background Phytochromes are a family of red/far-red photoreceptors that regulate a number of important developmental traits in cotton (Gossypium spp., including plant architecture, fiber development, and photoperiodic flowering. Little is known about the composition and evolution of the phytochrome gene family in diploid (G. herbaceum, G. raimondii or allotetraploid (G. hirsutum, G. barbadense cotton species. The objective of this study was to obtain a preliminary inventory and molecular-evolutionary characterization of the phytochrome gene family in cotton. Results We used comparative sequence resources to design low-degeneracy PCR primers that amplify genomic sequence tags (GSTs for members of the PHYA, PHYB/D, PHYC and PHYE gene sub-families from A- and D-genome diploid and AD-genome allotetraploid Gossypium species. We identified two paralogous PHYA genes (designated PHYA1 and PHYA2 in diploid cottons, the result of a Malvaceae-specific PHYA gene duplication that occurred approximately 14 million years ago (MYA, before the divergence of the A- and D-genome ancestors. We identified a single gene copy of PHYB, PHYC, and PHYE in diploid cottons. The allotetraploid genomes have largely retained the complete gene complements inherited from both of the diploid genome ancestors, with at least four PHYA genes and two genes encoding PHYB, PHYC and PHYE in the AD-genomes. We did not identify a PHYD gene in any cotton genomes examined. Conclusions Detailed sequence analysis suggests that phytochrome genes retained after duplication by segmental duplication and allopolyploidy appear to be evolving independently under a birth-and-death-process with strong purifying selection. Our study provides a preliminary phytochrome gene inventory that is necessary and sufficient for further characterization of the biological functions of each of the cotton phytochrome genes, and for the development of 'candidate gene' markers that are potentially useful for

  9. QTL analysis of cotton fiber length in advanced backcross populations derived from a cross between Gossypium hirsutum and G. mustelinum.

    Science.gov (United States)

    Wang, Baohua; Draye, Xavier; Zhuang, Zhimin; Zhang, Zhengsheng; Liu, Min; Lubbers, Edward L; Jones, Don; May, O Lloyd; Paterson, Andrew H; Chee, Peng W

    2017-06-01

    QTLs for fiber length mapped in three generations of advanced backcross populations derived from crossing Gossypium hirsutum and Gossypium mustelinum showed opportunities to improve elite cottons by introgression from wild relatives. The molecular basis of cotton fiber length in crosses between Gossypium hirsutum and Gossypium mustelinum was dissected using 21 BC 3 F 2 and 12 corresponding BC 3 F 2:3 and BC 3 F 2:4 families. Sixty-five quantitative trait loci (QTLs) were detected by one-way analysis of variance. The QTL numbers detected for upper-half mean length (UHM), fiber uniformity index (UI), and short fiber content (SFC) were 19, 20, and 26 respectively. Twenty-three of the 65 QTLs could be detected at least twice near adjacent markers in the same family or near the same markers across different families/generations, and 32 QTLs were detected in both one-way variance analyses and mixed model-based composite interval mapping. G. mustelinum alleles increased UHM and UI and decreased SFC for five, one, and one QTLs, respectively. In addition to the main-effect QTLs, 17 epistatic QTLs were detected which helped to elucidate the genetic basis of cotton fiber length. Significant among-family genotypic effects were detected at 18, 16, and 16 loci for UHM, UI, and SFC, respectively. Six, two, and two loci showed genotype × family interaction for UHM, UI and SFC, respectively, illustrating complexities that might be faced in introgression of exotic germplasm into cultivated cotton. Co-location of many QTLs for UHM, UI, and SFC accounted for correlations among these traits, and selection of these QTLs may improve the three traits simultaneously. The simple sequence repeat (SSR) markers associated with G. mustelinum QTLs will assist breeders in transferring and maintaining valuable traits from this exotic source during cultivar development.

  10. Genetic diversity and structure of elite cotton germplasm (Gossypium hirsutum L.) using genome-wide SNP data.

    Science.gov (United States)

    Ai, XianTao; Liang, YaJun; Wang, JunDuo; Zheng, JuYun; Gong, ZhaoLong; Guo, JiangPing; Li, XueYuan; Qu, YanYing

    2017-10-01

    Cotton (Gossypium spp.) is the most important natural textile fiber crop, and Gossypium hirsutum L. is responsible for 90% of the annual cotton crop in the world. Information on cotton genetic diversity and population structure is essential for new breeding lines. In this study, we analyzed population structure and genetic diversity of 288 elite Gossypium hirsutum cultivar accessions collected from around the world, and especially from China, using genome-wide single nucleotide polymorphisms (SNP) markers. The average polymorphsim information content (PIC) was 0.25, indicating a relatively low degree of genetic diversity. Population structure analysis revealed extensive admixture and identified three subgroups. Phylogenetic analysis supported the subgroups identified by STRUCTURE. The results from both population structure and phylogenetic analysis were, for the most part, in agreement with pedigree information. Analysis of molecular variance revealed a larger amount of variation was due to diversity within the groups. Establishment of genetic diversity and population structure from this study could be useful for genetic and genomic analysis and systematic utilization of the standing genetic variation in upland cotton.

  11. Characterization and expression analysis of TERMINAL FLOWER1 homologs from cultivated alloteraploid cotton (Gossypium hirsutum) and its diploid progenitors.

    Science.gov (United States)

    Argiriou, Anagnostis; Michailidis, Georgios; Tsaftaris, Athanasios S

    2008-10-09

    The seasonal cycle and persistence of a plant is governed by a combination of the determinate or indeterminate status of shoot and root apical meristems. A perennial plant is one in which the apical meristem of at least one of its shoot axes remains indeterminate beyond the first growth season. TERMINAL FLOWER1 (TFL1) genes play important roles in regulating flowering time, the fate of inflorescence meristem and perenniality. To investigate the role of TFL1-like genes in the determination of the apical meristems in an industrially important crop cultivated for its fibers, we isolated and characterized two TFL1 homologs (TFL1a and TFL1b) from tetraploid cultivated cotton (Gossypium hirsutum) and its diploid progenitors (Gossypium arboreum and Gossypium raimondii). All isolated genes maintain the same exon-intron organization. Their phylogenetic analysis at the amino acid level confirmed that the isolated sequences are TFL1-like genes and collocate in the TFL1 clade of the PEBP protein family. Expression analysis revealed that the genes TFL1a and TFL1b have slightly different expression patterns, suggesting different functional roles in the determination of the meristems. Additionally, promoter analysis by computational methods revealed the presence of common binding motifs in TFL1-like promoters. These are the first reported TFL1-like genes isolated from cotton, the most important crop for the textile industry.

  12. Plot- and landscape-level changes in climate and vegetation following defoliation of exotic saltcedar (Tamarix sp.) from the biocontrol agent Diorhabda carinulata along a stream in the Mojave Desert (USA)

    Science.gov (United States)

    Bateman, H.L.; Nagler, P.L.; Glenn, E.P.

    2013-01-01

    The biocontrol agent, northern tamarisk beetle (Diorhabda carinulata), has been used to defoliate non-native saltcedar (Tamarix spp.) in USA western riparian systems since 2001. Biocontrol has the potential to impact biotic communities and climatic conditions in affected riparian areas. To determine the relationships between biocontrol establishment and effects on vegetation and climate at the plot and landscape scales, we measured temperature, relative humidity, foliage canopy, solar radiation, and used satellite imagery to assess saltcedar defoliation and evapotranspiration (ET) along the Virgin River in the Mojave Desert. Following defoliation solar radiation increased, daily humidity decreased, and maximum daily temperatures tended to increase. MODIS and Landsat satellite imagery showed defoliation was widespread, resulting in reductions in ET and vegetation indices. Because biocontrol beetles are spreading into new saltcedar habitats on arid western rivers, and the eventual equilibrium between beetles and saltcedar is unknown, it is necessary to monitor trends for ecosystem functions and higher trophic-level responses in habitats impacted by biocontrol.

  13. Ten alien chromosome additions of Gossypium hirsutum-Gossypium bickii developed by integrative uses of GISH and species-specific SSR markers.

    Science.gov (United States)

    Tang, Dong; Feng, Shouli; Li, Sai; Chen, Yu; Zhou, Baoliang

    2018-03-27

    Gossypium bickii: (2n = 26, G 1 G 1 ), a wild diploid cotton, carries many favourable traits. However, these favourable traits cannot be directly transferred into G. hirsutum (2n = 52, AADD) cultivars due to the differences in genomes. Monosomic alien addition lines (MAALs) are considered an invaluable tool for the introgression of genes of interest from wild relatives into cultivated crops. In this study, the G. hirsutum-G. bickii amphidiploid (2n = 78, AADDG 1 G 1 ) was backcrossed with G. hirsutum to develop alien additions containing individual G. bickii chromosomes in a G. hirsutum background. Genomic in situ hybridization was employed to detect the number of alien chromosomes added to the backcross progenies. A total of 183 G. bickii-specific DNA markers were developed to discriminate the identities of the G. bickii chromosomes added to G. hirsutum and assess the alien chromosome transmissibility. Chromosomes 4G b and 13G b showed the highest transmissibility, while chromosomes 1G b , 7G b and 11G b showed the lowest. Ten of the 13 possible G. hirsutum-G. bickii MAALs were isolated and characterized, which will lay the foundation for transferring resistance genes of G. bickii into G. hirsutum, as well as for gene assignment, physical mapping, and selective isolation and mapping of cDNAs for particular G. bickii chromosomes. The strategies of how to use MAALs to develop varieties with the trait of interest from wild species (such as glanded plant-glandless seed) were proposed and discussed.

  14. Gossypium hirsutum

    Indian Academy of Sciences (India)

    2015-03-12

    Mar 12, 2015 ... of molecular markers and the refinement of statistical tools have created renewed interest in this ..... types revealed that although 94% of the genetic diversity was attributable to differences within ..... Y. Z., Hua J. P., Sun X. L., Zhang Q. F. and. Corke H. 2001 Mapping quantitative trait loci for milling quality,.

  15. Development of a data management front end for use with a LANDSAT based information system. [assessing gypsy moth defoliation damage in Pennsylvania

    Science.gov (United States)

    Turner, B. J. (Principal Investigator)

    1982-01-01

    A user friendly front end was constructed to facilitate access to the LANDSAT mosaic data base supplied by JPL and to process both LANDSAT and ancillary data. Archieval and retrieval techniques were developed to efficiently handle this data base and make it compatible with requirements of the Pennsylvania Bureau of Forestry. Procedures are ready for: (1) forming the forest/nonforest mask in ORSER compressed map format using GSFC-supplied classification procedures; (2) registering data from a new scene (defoliated) to the mask (which may involve mosaicking if the area encompasses two LANDSAT scenes; (3) producing a masked new data set using the MASK program; (4) analyzing this data set to produce a map showing degrees of defoliation, output on the Versatec plotter; and (5) producing color composite maps by a diazo-type process.

  16. Comparative transcriptome analysis of Gossypium hirsutum L. in response to sap sucking insects: aphid and whitefly.

    Science.gov (United States)

    Dubey, Neeraj Kumar; Goel, Ridhi; Ranjan, Alok; Idris, Asif; Singh, Sunil Kumar; Bag, Sumit K; Chandrashekar, Krishnappa; Pandey, Kapil Deo; Singh, Pradhyumna Kumar; Sawant, Samir V

    2013-04-11

    Cotton (Gossypium hirsutum L.) is a major fiber crop that is grown worldwide; it faces extensive damage from sap-sucking insects, including aphids and whiteflies. Genome-wide transcriptome analysis was performed to understand the molecular details of interaction between Gossypium hirsutum L. and sap-sucking pests, namely Aphis gossypii (Aphid) and Bemisia tabacci (Whiteflies). Roche's GS-Titanium was used to sequence transcriptomes of cotton infested with aphids and whiteflies for 2 h and 24 h. A total of 100935 contigs were produced with an average length of 529 bp after an assembly in all five selected conditions. The Blastn of the non-redundant (nr) cotton EST database resulted in the identification of 580 novel contigs in the cotton plant. It should be noted that in spite of minimal physical damage caused by the sap-sucking insects, they can change the gene expression of plants in 2 h of infestation; further change in gene expression due to whiteflies is quicker than due to aphids. The impact of the whitefly 24 h after infestation was more or less similar to that of the aphid 2 h after infestation. Aphids and whiteflies affect many genes that are regulated by various phytohormones and in response to microbial infection, indicating the involvement of complex crosstalk between these pathways. The KOBAS analysis of differentially regulated transcripts in response to aphids and whiteflies indicated that both the insects induce the metabolism of amino acids biosynthesis specially in case of whiteflies infestation at later phase. Further we also observed that expression of transcript related to photosynthesis specially carbon fixation were significantly influenced by infestation of Aphids and Whiteflies. A comparison of different transcriptomes leads to the identification of differentially and temporally regulated transcripts in response to infestation by aphids and whiteflies. Most of these differentially expressed contigs were related to genes involved in biotic

  17. Spectral mixture analysis to monitor defoliation in mixed-aged Eucalyptus globulus Labill plantations in southern Australia using Landsat 5-TM and EO-1 Hyperion data

    Science.gov (United States)

    Somers, B.; Verbesselt, J.; Ampe, E. M.; Sims, N.; Verstraeten, W. W.; Coppin, P.

    2010-08-01

    Defoliation is a key parameter of forest health and is associated with reduced productivity and tree mortality. Assessing the health of forests requires regular observations over large areas. Satellite remote sensing provides a cost-effective alternative to traditional ground-based assessment of forest health, but assessing defoliation can be difficult due to mixed pixels where vegetation cover is low or fragmented. In this study we apply a novel spectral unmixing technique, referred to as weighted Multiple Endmember Spectral Mixture Analysis (wMESMA), to Landsat 5-TM and EO-1 Hyperion data acquired over a Eucalyptus globulus (Labill.) plantation in southern Australia. This technique combines an iterative mixture analysis cycle allowing endmembers to vary on a per pixel basis (MESMA) and a weighting algorithm that prioritizes wavebands based on their robustness against endmember variability. Spectral mixture analysis provides an estimate of the physically interpretable canopy cover, which is not necessarily correlated with defoliation in mixed-aged plantations due to natural variation in canopy cover as stands age. There is considerable variability in the degree of defoliation as well as in stand age among sites and in this study we found that results were significantly improved by the inclusion of an age correction algorithm for both the multi-spectral ( R2no age correction = 0.55 vs R2age correction = 0.73 for Landsat) and hyperspectral ( R2no age correction = 0.12 vs R2age correction = 0.50 for Hyperion) image data. The improved accuracy obtained from Landsat compared to the Hyperion data illustrates the potential of applying SMA techniques for analysis of multi-spectral datasets such as MODIS and SPOT-VEGETATION.

  18. Timing of Drought Triggers Distinct Growth Responses in Holm Oak: Implications to Predict Warming-Induced Forest Defoliation and Growth Decline

    Directory of Open Access Journals (Sweden)

    J. Julio Camarero

    2015-05-01

    Full Text Available Droughts negatively impact forests by reducing growth and increasing defoliation leading to forest dieback as the climate becomes warmer and drier. However, the timing and severity of droughts determine how differently or intensively water shortage affects primary (shoot and leaf formation and secondary growth (stem radial growth based on tree-ring widths. We compare the impact of two severe droughts (2005, 2012, showing different climatic characteristics on the growth responses of three Mediterranean holm oak stands in northeastern Spain. We also quantify climate trends and drought severity. Then, we use remote sensing data to infer how those droughts impacted forest productivity. Both droughts were characterized by warm and dry spring conditions leading to reduced budburst, low shoot production, asynchrony in primary growth and decreased productivity and scarce radial growth, particularly in 2005. However, defoliation peaked in 2012 when radial growth showed minimum values and early spring and late summer temperatures reached maximum values. We discuss how uncoupled and resilient are the responses of primary and secondary growth to drought. Finally, these findings are used to gain insight into the drought-related drivers of defoliation in Spanish holm oak forests.

  19. Effects of artificial defoliation of pines on the structure and physiology of the soil fungal community of a mixed pine-spruce forest

    Science.gov (United States)

    Cullings, Ken; Raleigh, Christopher; New, Michael H.; Henson, Joan

    2005-01-01

    Loss of photosynthetic area can affect soil microbial communities by altering the availability of fixed carbon. We used denaturing gradient gel electrophoresis (DGGE) and Biolog filamentous-fungus plates to determine the effects of artificial defoliation of pines in a mixed pine-spruce forest on the composition of the fungal community in a forest soil. As measured by DGGE, two fungal species were affected significantly by the defoliation of pines (P soil fungus increased. The decrease in the amount of Cenococcum organisms may have occurred because of the formation of extensive hyphal networks by species of this genus, which require more of the carbon fixed by their host, or because this fungus is dependent upon quantitative differences in spruce root exudates. The defoliation of pines did not affect the overall composition of the soil fungal community or fungal-species richness (number of species per core). Biolog filamentous-fungus plate assays indicated a significant increase (P soil fungi and the rate at which these substrates were used, which could indicate an increase in fungal-species richness. Thus, either small changes in the soil fungal community give rise to significant increases in physiological capabilities or PCR bias limits the reliability of the DGGE results. These data indicate that combined genetic and physiological assessments of the soil fungal community are needed to accurately assess the effect of disturbance on indigenous microbial systems.

  20. Effects of artificial defoliation of pines on the structure and physiology of the soil fungal community of a mixed pine-spruce forest

    Science.gov (United States)

    Cullings, Ken; Raleigh, Christopher; New, Michael H.; Henson, Joan

    2005-01-01

    Loss of photosynthetic area can affect soil microbial communities by altering the availability of fixed carbon. We used denaturing gradient gel electrophoresis (DGGE) and Biolog filamentous-fungus plates to determine the effects of artificial defoliation of pines in a mixed pine-spruce forest on the composition of the fungal community in a forest soil. As measured by DGGE, two fungal species were affected significantly by the defoliation of pines (P genus Cenococcum decreased significantly, while the frequency of organisms of an unidentified soil fungus increased. The decrease in the amount of Cenococcum organisms may have occurred because of the formation of extensive hyphal networks by species of this genus, which require more of the carbon fixed by their host, or because this fungus is dependent upon quantitative differences in spruce root exudates. The defoliation of pines did not affect the overall composition of the soil fungal community or fungal-species richness (number of species per core). Biolog filamentous-fungus plate assays indicated a significant increase (P indigenous microbial systems.

  1. Effect of Climatic Variables on Abundance and Dispersal of Lecanosticta acicola Spores and Their Impact on Defoliation on Eastern White Pine.

    Science.gov (United States)

    Wyka, S A; McIntire, C D; Smith, C; Munck, I A; Rock, B N; Asbjornsen, H; Broders, K D

    2018-03-01

    The disease complex white pine needle damage (WPND), first reported in 2006, has now escalated to an epidemic state across the northeastern United States. Although this complex is composed of several fungal species, Lecanosticta acicola is considered to be the primary causal agent. Knowledge regarding the epidemiology, specific climatic factors that affect the spread of L. acicola on eastern white pine (Pinus strobus) in natural forest settings, and potential risks repeated defoliation may have on tree health is limited. Therefore, this study examined how climatic variables affect the abundance and distance of spore dispersal of L. acicola and compared litterfall caused by defoliation versus natural needle abscission. Conidia were observed on spore traps from May through August, with a peak in abundance occurring in June, corresponding to the defoliation of second- and third-year foliage measured in litter traps. During peak spore production, relative humidity and the occurrence of rainfall was found to have the greatest influence on spore abundance. Our results will aid managers in determining how far from infected trees natural regeneration will likely be affected and predicting future disease severity based on climatic conditions.

  2. The influence of apical and basal defoliation on the canopy structure and biochemical composition of Vitis vinifera cv. Shiraz grapes and wine

    Science.gov (United States)

    Zhang, Pangzhen; Wu, Xiwen; Needs, Sonja; Liu, Di; Fuentes, Sigfredo; Howell, Kate

    2017-07-01

    Defoliation is a commonly used viticultural technique to balance the ratio between grapevine vegetation and fruit. Defoliation is conducted around the fruit zone to reduce the leaf photosynthetic area, and to increase sunlight exposure of grape bunches. Apical leaf removal is not commonly practiced, and therefore its influence on canopy structure and resultant wine aroma is not well studied. This study quantified the influences of apical and basal defoliation on canopy structure parameters using canopy cover photography and computer vision algorithms. The influence of canopy structure changes on the chemical compositions of grapes and wines was investigated over two vintages (2010-11 and 2015-16) in Yarra Valley, Australia. The Shiraz grapevines were subjected to five different treatments: no leaf removal (Ctrl); basal (TB) and apical (TD) leaf removal at veraison and intermediate ripeness, respectively. Basal leaf removal significantly reduced the leaf area index and foliage cover and increased canopy porosity, while apical leaf removal had limited influences on canopy parameters. However, the latter tended to result in lower alcohol level in the finished wine. Statistically significant increases in pH and decreases in TA was observed in shaded grapes, while no significant changes in the color profile and volatile compounds of the resultant wine were found. These results suggest that apical leaf removal is an effective method to reduce wine alcohol concentration with minimal influences on wine composition.

  3. Structure and dynamics of the oribatid mite communities (Acari, Oribatida in some Quercus forests, in relation with the treatments used in the control of defoliating insects

    Directory of Open Access Journals (Sweden)

    Otilia Ivan

    2009-11-01

    Full Text Available This study was carried out in the context of some complex researches concerning the effects of long standing use of the pesticides in the control of the defoliating insects, in forest ecosystems. These investigations showed that the structural parameters of the oribatid mites' communities are obviously influenced by the stands biotic and abiotic factors, alongside some varied anthropogenic factors, such as:treatments, industrial pollution, some management measures etc. This paper includes a comparative analysis of the research results obtained in two forest stands placed in the Moldavian Plateau (Ciurea Forest District, Iasi county: Tomesti-Poieni (integratedcontrol of the defoliating insects and ªanta (chemical control. The analysis of the faunistic material collected in these two forests has shown that, in the first stand (the control perimeter, the density, the number of species, and also the specific diversity have higher values compared to the second station. In unfavourable climatic conditions(e. g. during the winter season it was observed a more increased decline of these parameters in the ªanta forest, related to the control station. In such conditions (low temperatures, deficit of humidity etc. the change of the vertical distribution of the effectives was observed in both stands, and a massive migration of the oribatid mites in the deeper, humiferous layer of the soil. The results gathered during the project emphasize that the chemical treatments used against the defoliating insects enhance the negative effects of some natural factors, representing an additional stressing factor on the edaphic microarthropods' communities.

  4. Proteomic profiling of developing cotton fibers from wild and domesticated Gossypium barbadense.

    Science.gov (United States)

    Hu, Guanjing; Koh, Jin; Yoo, Mi-Jeong; Grupp, Kara; Chen, Sixue; Wendel, Jonathan F

    2013-10-01

    Pima cotton (Gossypium barbadense) is widely cultivated because of its long, strong seed trichomes ('fibers') used for premium textiles. These agronomically advanced fibers were derived following domestication and thousands of years of human-mediated crop improvement. To gain an insight into fiber development and evolution, we conducted comparative proteomic and transcriptomic profiling of developing fiber from an elite cultivar and a wild accession. Analyses using isobaric tag for relative and absolute quantification (iTRAQ) LC-MS/MS technology identified 1317 proteins in fiber. Of these, 205 were differentially expressed across developmental stages, and 190 showed differential expression between wild and cultivated forms, 14.4% of the proteome sampled. Human selection may have shifted the timing of developmental modules, such that some occur earlier in domesticated than in wild cotton. A novel approach was used to detect possible biased expression of homoeologous copies of proteins. Results indicate a significant partitioning of duplicate gene expression at the protein level, but an approximately equal degree of bias for each of the two constituent genomes of allopolyploid cotton. Our results demonstrate the power of complementary transcriptomic and proteomic approaches for the study of the domestication process. They also provide a rich database for mining for functional analyses of cotton improvement or evolution. © 2013 The Authors. New Phytologist © 2013 New Phytologist Trust.

  5. Proteomics profiling of fiber development and domestication in upland cotton (Gossypium hirsutum L.).

    Science.gov (United States)

    Hu, Guanjing; Koh, Jin; Yoo, Mi-Jeong; Pathak, Dharminder; Chen, Sixue; Wendel, Jonathan F

    2014-12-01

    Comparative proteomic analyses were performed to detail the evolutionary consequences of strong directional selection for enhanced fiber traits in modern upland cotton (Gossypium hirsutum L.). Using two complementary proteomic approaches, 2-DE and iTRAQ LC-MS/MS, fiber proteomes were examined for four representative stages of fiber development. Approximately 1,000 protein features were characterized using each strategy, collectively resulting in the identification and functional categorization of 1,223 proteins. Unequal contributions of homoeologous proteins were detected for over a third of the fiber proteome, but overall expression was balanced with respect to the genome-of-origin in the allopolyploid G. hirsutum. About 30% of the proteins were differentially expressed during fiber development within wild and domesticated cotton. Notably, domestication was accompanied by a doubling of protein developmental dynamics for the period between 10 and 20 days following pollination. Expression levels of 240 iTRAQ proteins and 293 2-DE spots were altered by domestication, collectively representing multiple cellular and metabolic processes, including metabolism, energy, protein synthesis and destination, defense and stress response. Analyses of homoeolog-specific expression indicate that duplicated gene products in cotton fibers can be differently regulated in response to selection. These results demonstrate the power of proteomics for the analysis of crop domestication and phenotypic evolution.

  6. MicroRNA-target gene responses to lead-induced stress in cotton (Gossypium hirsutum L.).

    Science.gov (United States)

    He, Qiuling; Zhu, Shuijin; Zhang, Baohong

    2014-09-01

    MicroRNAs (miRNAs) play key roles in plant responses to various metal stresses. To investigate the miRNA-mediated plant response to heavy metals, cotton (Gossypium hirsutum L.), the most important fiber crop in the world, was exposed to different concentrations (0, 25, 50, 100, and 200 µM) of lead (Pb) and then the toxicological effects were investigated. The expression patterns of 16 stress-responsive miRNAs and 10 target genes were monitored in cotton leaves and roots by quantitative real-time PCR (qRT-PCR); of these selected genes, several miRNAs and their target genes are involved in root development. The results show a reciprocal regulation of cotton response to lead stress by miRNAs. The characterization of the miRNAs and the associated target genes in response to lead exposure would help in defining the potential roles of miRNAs in plant adaptation to heavy metal stress and further understanding miRNA regulation in response to abiotic stress.

  7. Genome-wide characterization and expression analyses of superoxide dismutase (SOD) genes in Gossypium hirsutum.

    Science.gov (United States)

    Wang, Wei; Zhang, Xiaopei; Deng, Fenni; Yuan, Rui; Shen, Fafu

    2017-05-12

    Superoxide dismutases (SODs) are a key antioxidant enzyme family, which have been implicated in protecting plants against the toxic effects of reactive oxygen species. Despite current studies have shown that the gene family are involved in plant growth and developmental processes and biotic and abiotic stress responses, little is known about its functional role in upland cotton. In the present study, we comprehensively analyzed the characteristics of the SOD gene family in upland cotton (Gossypium hirsutum). Based on their conserved motifs, 18 GhSOD genes were identified and phylogenetically classified into five subgroups which corroborated their classifications based on gene-structure patterns and subcellular localizations. The GhSOD sequences were distributed at different densities across 12 of the 26 chromosomes. The conserved domains, gene family evolution cis-acting elements of promoter regions and miRNA-mediated posttranscriptional regulation were predicted and analyzed. In addition, the expression pattern of 18 GhSOD genes were tested in different tissues/organs and developmental stages, and different abiotic stresses and abscisic acid, which indicated that the SOD gene family possessed temporal and spatial specificity expression specificity and may play important roles in reactive oxygen species scavenging caused by various stresses in upland cotton. This study describes the first genome-wide analysis of the upland cotton SOD gene family, and the results will help establish a foundation for the further cloning and functional verification of the GhSOD gene family during stress responses, leading to crop improvement.

  8. Genome-wide identification and characterization of phospholipase C gene family in cotton (Gossypium spp.).

    Science.gov (United States)

    Zhang, Bing; Wang, Yanmei; Liu, Jin-Yuan

    2018-01-01

    Phospholipase C (PLC) are important regulatory enzymes involved in several lipid and Ca 2+ -dependent signaling pathways. Previous studies have elucidated the versatile roles of PLC genes in growth, development and stress responses of many plants, however, the systematic analyses of PLC genes in the important fiber-producing plant, cotton, are still deficient. In this study, through genome-wide survey, we identified twelve phosphatidylinositol-specific PLC (PI-PLC) and nine non-specific PLC (NPC) genes in the allotetraploid upland cotton Gossypium hirsutum and nine PI-PLC and six NPC genes in two diploid cotton G. arboretum and G.raimondii, respectively. The PI-PLC and NPC genes of G. hirsutum showed close phylogenetic relationship with their homologous genes in the diploid cottons and Arabidopsis. Segmental and tandem duplication contributed greatly to the formation of the gene family. Expression profiling indicated that few of the PLC genes are constitutely expressed, whereas most of the PLC genes are preferentially expressed in specific tissues and abiotic stress conditions. Promoter analyses further implied that the expression of these PLC genes might be regulated by MYB transcription factors and different phytohormones. These results not only suggest an important role of phospholipase C members in cotton plant development and abiotic stress response but also provide good candidate targets for future molecular breeding of superior cotton cultivars.

  9. Development and characterization of genomic and expressed SSRs for levant cotton (Gossypium herbaceum L.).

    Science.gov (United States)

    Jena, Satya Narayan; Srivastava, Anukool; Rai, Krishan Mohan; Ranjan, Alok; Singh, Sunil K; Nisar, Tarannum; Srivastava, Meenal; Bag, Sumit K; Mantri, Shrikant; Asif, Mehar Hasan; Yadav, Hemant Kumar; Tuli, Rakesh; Sawant, Samir V

    2012-02-01

    Four microsatellite-enriched genomic libraries for CA(15), GA(15), AAG(8) and ATG(8) repeats and transcriptome sequences of five cDNA libraries of Gossypium herbaceum were explored to develop simple sequence repeat (SSR) markers. A total of 428 unique clones from repeat enriched genomic libraries were mined for 584 genomic SSRs (gSSRs). In addition, 99,780 unigenes from transcriptome sequencing were explored for 8,900 SSR containing sequences with 12,471 expressed SSRs. The present study adds 1,970 expressed SSRs and 263 gSSRs to the public domain for the use of genetic studies of cotton. When 150 gSSRs and 50 expressed SSRs were tested on a panel of four species of cotton, 68 gSSRs and 12 expressed SSRs revealed polymorphism. These 200 SSRs were further deployed on 15 genotypes of levant cotton for the genetic diversity assessment. This is the first report on the successful use of repeat enriched genomic library and expressed sequence database for microsatellite markers development in G. herbaceum.

  10. Characterization of two NADPH: cytochrome P450 reductases from cotton (Gossypium hirsutum).

    Science.gov (United States)

    Yang, Chang-Qing; Lu, Shan; Mao, Ying-Bo; Wang, Ling-Jian; Chen, Xiao-Ya

    2010-01-01

    Cytochrome P450 monooxygenases (P450s) are commonly involved in biosynthesis of endogenous compounds and catabolism of xenobiotics, and their activities rely on a partner enzyme, cytochrome P450 reductase (CPR, E.C.1.6.2.4). Two CPR cDNAs, GhCPR1 and GhCPR2, were isolated from cotton (Gossypium hirsutum). They are 71% identical to each other at the amino acid sequence level and belong to the Class I and II of dicotyledonous CPRs, respectively. The recombinant enzymes reduced cytochrome c, ferricyanide and dichlorophenolindophenol (DCPIP) in an NADPH-dependent manner, and supported the activity of CYP73A25, a cinnamate 4-hydroxylase of cotton. Both GhCPR genes were widely expressed in cotton tissues, with a reduced expression level of GhCPR2 in the glandless cotton cultivar. Expression of GhCPR2, but not GhCPR1, was inducible by mechanical wounding and elicitation, indicating that the GhCPR2 is more related to defense reactions, including biosynthesis of secondary metabolites. 2009 Elsevier Ltd. All rights reserved.

  11. Urease from cotton (Gossypium hirsutum) seeds: isolation, physicochemical characterization, and antifungal properties of the protein.

    Science.gov (United States)

    Menegassi, Angela; Wassermann, German E; Olivera-Severo, Deiber; Becker-Ritt, Arlete B; Martinelli, Anne Helene S; Feder, Vanessa; Carlini, Celia R

    2008-06-25

    Ureases (EC 3.5.1.5) are metalloenzymes that hydrolyze urea to produce ammonia and carbon dioxide These enzymes, which are found in fungi, bacteria, and plants, show very similar structures. Despite an abundance of urease in vegetal tissues, the physiological role of this enzyme in plants is still poorly understood. It has been previously described that ureases from the legumes jackbean ( Canavalia ensiformis) and soybean ( Glycine max) have insecticidal activity and antifungal properties. This work presents the physicochemical purification and characterization of a urease from cotton ( Gossypium hirsutum) seeds, the first description of this enzyme in Malvaceae. The urease content varied among different cotton cultivars. Cotton seed urease (98.3 kDa) displayed low ureolytic activity but exhibited potent antifungal properties at sub-micromolar concentrations against different phytopathogenic fungi. As described for other ureases, the antifungal effect of cotton urease persisted after treatment with an irreversible inhibitor of its enzyme activity. The data suggest an important role of these proteins in plant defense.

  12. Genome-wide identification and characterization of TCP transcription factor genes in upland cotton (Gossypium hirsutum).

    Science.gov (United States)

    Li, Wen; Li, Deng-Di; Han, Li-Hong; Tao, Miao; Hu, Qian-Qian; Wu, Wen-Ying; Zhang, Jing-Bo; Li, Xue-Bao; Huang, Geng-Qing

    2017-08-31

    TCP proteins are plant-specific transcription factors (TFs), and perform a variety of physiological functions in plant growth and development. In this study, 74 non-redundant TCP genes were identified in upland cotton (Gossypium hirsutum L.) genome. Cotton TCP family can be classified into two classes (class I and class II) that can be further divided into 11 types (groups) based on their motif composition. Quantitative RT-PCR analysis indicated that GhTCPs display different expression patterns in cotton tissues. The majority of these genes are preferentially or specifically expressed in cotton leaves, while some GhTCP genes are highly expressed in initiating fibers and/or elongating fibers of cotton. Yeast two-hybrid results indicated that GhTCPs can interact with each other to form homodimers or heterodimers. In addition, GhTCP14a and GhTCP22 can interact with some transcription factors which are involved in fiber development. These results lay solid foundation for further study on the functions of TCP genes during cotton fiber development.

  13. Isolation and characterization of a sterile-dwarf mutant in Asian cotton (Gossypium arboreum L.).

    Science.gov (United States)

    Wu, Chuntai; Zhou, Baoliang; Zhang, Tianzhen

    2009-06-01

    Plant height is an important trait in cotton. To elucidate the molecular mechanisms of the dwarf phenotype, a sterile-dwarf mutant derived from Gossypium arboreum L. cv. Jinhuazhongmian was developed by (60)Co gamma-ray irradiation. The results demonstrated that the sterile dwarf mutant phenotype was controlled by a pair of recessive gene, which was designated sd(a). Plants carrying the sd(a) gene contained lower levels of indole-3-acetic acid (IAA) and abscisic acid (ABA) compared with wild-type (WT) plants. The chlorophyll content and net photosynthetic rate in mutant leaves were markedly decreased. However, it was possible that ABA biosynthesis or signaling was involved in governing the sd(a) phenotype. Semi-quantitative RT-PCR analysis detected 13 differentially expressed ESTs, and the sterile-dwarf mutant exhibited decreased expression levels relative to the WT. The role of nine potential hormone biosynthetic genes in the synthesis of IAA, ABA, polyamines (PAs) and jasmonic acid (JA) were discussed.

  14. Characterization and Functional Analysis of PEBP Family Genes in Upland Cotton (Gossypium hirsutum L.).

    Science.gov (United States)

    Zhang, Xiaohong; Wang, Congcong; Pang, Chaoyou; Wei, Hengling; Wang, Hantao; Song, Meizhen; Fan, Shuli; Yu, Shuxun

    2016-01-01

    Upland cotton (Gossypium hirsutum L.) is a naturally occurring photoperiod-sensitive perennial plant species. However, sensitivity to the day length was lost during domestication. The phosphatidylethanolamine-binding protein (PEBP) gene family, of which three subclades have been identified in angiosperms, functions to promote and suppress flowering in photoperiod pathway. Recent evidence indicates that PEBP family genes play an important role in generating mobile flowering signals. We isolated homologues of the PEBP gene family in upland cotton and examined their regulation and function. Nine PEBP-like genes were cloned and phylogenetic analysis indicated the genes belonged to four subclades (FT, MFT, TFL1 and PEBP). Cotton PEBP-like genes showed distinct expression patterns in relation to different cotton genotypes, photoperiod responsive and cultivar maturity. The GhFT gene expression of a semi-wild race of upland cotton were strongly induced under short day condition, whereas the GhPEBP2 gene expression was induced under long days. We also elucidated that GhFT but not GhPEBP2 interacted with FD-like bZIP transcription factor GhFD and promote flowering under both long- and short-day conditions. The present result indicated that GhPEBP-like genes may perform different functions. This work corroborates the involvement of PEBP-like genes in photoperiod response and regulation of flowering time in different cotton genotypes, and contributes to an improved understanding of the function of PEBP-like genes in cotton.

  15. Genome-wide identification and characterization of JAZ gene family in upland cotton (Gossypium hirsutum).

    Science.gov (United States)

    Li, Wen; Xia, Xiao-Cong; Han, Li-Hong; Ni, Ping; Yan, Jing-Qiu; Tao, Miao; Huang, Geng-Qing; Li, Xue-Bao

    2017-06-05

    Plant JAZ (Jasmonate ZIM-domain) proteins play versatile roles in multiple aspects of plant development and defense. However, little is known about the JAZ family in allotetraploid upland cotton (Gossypium hirsutum) so far. In this study, 30 non-redundant JAZ genes were identified in upland cotton through genome-wide screening. Phylogenetic analysis revealed that the 30 proteins in cotton JAZ family are further divided into five groups (I - V), and members in the same group share highly conserved motif structures. Subcellular localization assay demonstrated that GhJAZ proteins are localized in the cell nucleus. Quantitative RT-PCR analysis indicated that GhJAZs display different expression patterns in cotton tissues, and most of them could be induced by Jasmonic (JA). Furthermore, some GhJAZ genes are preferentially expressed in cotton ovules and fibers, and showed differential expression in ovules of wild type cotton and fiberless mutant (fl) during fiber initiation. GhJAZ proteins could interact with each other to form homodimer or heterodimer, and they also interacted with some JA signaling regulators and the proteins involved in cotton fiber initiation. Collectively, our data suggested that some GhJAZ proteins may play important roles in cotton fiber initiation and development by regulating JA signaling as well as some fiber-related proteins.

  16. Purification and biochemical characterization of polyphenol oxidases from embryogenic and nonembryogenic cotton (Gossypium hirsutum L.) cells.

    Science.gov (United States)

    Kouakou, Tanoh Hilaire; Kouadio, Yatty Justin; Kouamé, Patrice; Waffo-Téguo, Pierre; Décendit, Alain; Mérillon, Jean-Michel

    2009-08-01

    Polyphenol oxidases (PPOs) were isolated from cell suspensions of two cultivars of cotton (Gossypium hirsutum L.), and their biochemical characteristics were studied. PPO from Coker 312, an embryogenic cultivar, showed a highest affinity to catechol 20 mM, and PPO from R405-2000, a nonembryogenic cultivar, showed a highest affinity to 4-methylcatechol 20 mM. The optimal pH for PPO activity was 7.0 and 6.0 for Coker 312 and R405-2000, respectively. The enzyme had an optimal temperature of 25 degrees C and was relatively stable at 20-30 degrees C. Reducing sodium metabisulfite, ascorbic acid, dithiothreitol, SnCl(2), and FeCl(3) markedly inhibited PPO activity, whereas its activity was highly enhanced by Mg(2+), Ca(2+), and Mn(2+) and was moderately inhibited by Ba(2+), Cu(2+), and Zn(2+). The analysis revealed a single band on the sodium dodecyl sulfate polyacrylamide gel electrophoresis which corresponded to a molecular weight of 55 kDa for Coker 312 and 42 kDa for R405-2000.

  17. Elucidation of thermotolerance diversity in cotton (Gossypium hirsutum L.) using physio-molecular approaches.

    Science.gov (United States)

    Rana, R M; Khan, S H; Ali, Z; Khan, A I; Khan, I A

    2011-06-14

    Cotton (Gossypium hirsutum) is an important cash crop, but high temperature during its growing season is one of the major factors that limit its productivity. This problem compels plant breeders to breed for heat tolerance, which can help to overcome this challenge. It is very important to make a comprehensive screening of heat-tolerant genotypes so that only the best are chosen. Here we report the combined use of several techniques that can help breeders to screen their germplasm. Twelve cultivated cotton genotypes were evaluated for thermotolerance, using assays that included electrolyte leakage, chlorophyll accumulation and protein profiling, as well as RAPDs to assess genetic diversity. Two genotypes (B-557 and NIAB-78) showed tolerant behavior in three thermotolerance assays. RAPD analysis results showed maximum similarity in a range of 86.7-66.7% between the genotypes MNH-554 and CIM-443. We conclude that combined use should be made of relative electrolyte leakage, chlorophyll stability and differential display with SDS-PAGE to aid in screening for stress tolerance. RAPD-based diversity analysis will further help to improve the efficiency of breeding programs.

  18. Response of Cotton (Gossypium Hirsutum L.) to Nitrogen Phosphorous Fertilizers in Western Kenya

    International Nuclear Information System (INIS)

    Kouko, W.O; Owino, G.

    1999-01-01

    The requirements for nitrogen and phosphorous fertilizers for growing cotton (Gossypium hirsutum L.) in Kenya are 26-kg N ha - 1 and 27 kg P ha - 1, respectively. Calcium ammonium nitrate (CAN) was recommended at the rate of 100 kg ha - 1 for black cotton soils while double superphosphate (DSP) was recommended at the rate of 150 kg ha - 1 on reddish brown clays. However, experiments conducted on a major soil types on which cotton is grown in Kenya showed that, soil colour is not the best indicator of nutrients supply power of the soil. It was found that Verto-eutric planosols of National Fibre Research Centres-Kibos requires application of 13-kg ha - 1 as CAN for optimal yields. Ferralo-eurtric Acrisols of Alupe Agricultural Research Sub-Centre, Busia needed 26-kg N ha - 1 and 9 kg P ha - 1 to give high yields. At Siaya FTC 9 kg P ha - 1 was adequate in providing the highest yields without nitrogen. Strict observation of recommended agronomic practices for growing cotton and good soil management practices for growing cotton and good soil management practices were observed a prerequisite for high response and efficient utilisation of fertilizers

  19. Comprehensive analysis of TCP transcription factors and their expression during cotton (Gossypium arboreum) fiber early development

    Science.gov (United States)

    Ma, Jun; Liu, Fang; Wang, Qinglian; Wang, Kunbo; Jones, Don C.; Zhang, Baohong

    2016-01-01

    TCP proteins are plant-specific transcription factors implicated to perform a variety of physiological functions during plant growth and development. In the current study, we performed for the first time the comprehensive analysis of TCP gene family in a diploid cotton species, Gossypium arboreum, including phylogenetic analysis, chromosome location, gene duplication status, gene structure and conserved motif analysis, as well as expression profiles in fiber at different developmental stages. Our results showed that G. arboreum contains 36 TCP genes, distributing across all of the thirteen chromosomes. GaTCPs within the same subclade of the phylogenetic tree shared similar exon/intron organization and motif composition. In addition, both segmental duplication and whole-genome duplication contributed significantly to the expansion of GaTCPs. Many these TCP transcription factor genes are specifically expressed in cotton fiber during different developmental stages, including cotton fiber initiation and early development. This suggests that TCP genes may play important roles in cotton fiber development. PMID:26857372

  20. Genome-wide identification and expression analysis of TCP transcription factors in Gossypium raimondii.

    Science.gov (United States)

    Ma, Jun; Wang, Qinglian; Sun, Runrun; Xie, Fuliang; Jones, Don C; Zhang, Baohong

    2014-10-16

    Plant-specific TEOSINTE-BRANCHED1/CYCLOIDEA/PCF (TCP) transcription factors play versatile functions in multiple aspects of plant growth and development. However, no systematical study has been performed in cotton. In this study, we performed for the first time the genome-wide identification and expression analysis of the TCP transcription factor family in Gossypium raimondii. A total of 38 non-redundant cotton TCP encoding genes were identified. The TCP transcription factors were divided into eleven subgroups based on phylogenetic analysis. Most TCP genes within the same subfamily demonstrated similar exon and intron organization and the motif structures were highly conserved among the subfamilies. Additionally, the chromosomal distribution pattern revealed that TCP genes were unevenly distributed across 11 out of the 13 chromosomes; segmental duplication is a predominant duplication event for TCP genes and the major contributor to the expansion of TCP gene family in G. raimondii. Moreover, the expression profiles of TCP genes shed light on their functional divergence.

  1. Genome-wide mining, characterization, and development of microsatellite markers in gossypium species.

    Science.gov (United States)

    Wang, Qiong; Fang, Lei; Chen, Jiedan; Hu, Yan; Si, Zhanfeng; Wang, Sen; Chang, Lijing; Guo, Wangzhen; Zhang, Tianzhen

    2015-06-01

    Although much research has been conducted to characterize microsatellites and develop markers, the distribution of microsatellites remains ambiguous and the use of microsatellite markers in genomic studies and marker-assisted selection is limited. To identify microsatellites for cotton research, we mined 100,290, 83,160, and 56,937 microsatellites with frequencies of 41.2, 49.1, and 74.8 microsatellites per Mb in the recently sequenced Gossypium species: G. hirsutum, G. arboreum, and G. raimondii, respectively. The distributions of microsatellites in their genomes were non-random and were positively and negatively correlated with genes and transposable elements, respectively. Of the 77,996 developed microsatellite markers, 65,498 were physically anchored to the 26 chromosomes of G. hirsutum with an average marker density of 34 markers per Mb. We confirmed 67,880 (87%) universal and 7,705 (9.9%) new genic microsatellite markers. The polymorphism was estimated in above three species by in silico PCR and validated with 505 markers in G. hirsutum. We further predicted 8,825 polymorphic microsatellite markers within G. hirsutum acc. TM-1 and G. barbadense cv. Hai7124. In our study, genome-wide mining and characterization of microsatellites, and marker development were very useful for the saturation of the allotetraploid genetic linkage map, genome evolution studies and comparative genome mapping.

  2. Analysis of upland cotton (Gossypium hirsutum) response to Verticillium dahliae inoculation by transcriptome sequencing.

    Science.gov (United States)

    Shao, B X; Zhao, Y L; Chen, W; Wang, H M; Guo, Z J; Gong, H Y; Sang, X H; Cui, Y L; Wang, C H

    2015-10-27

    Verticillium wilt is one of the main diseases in cotton (Gossypium hirsutum), severely reduces yield and fiber quality, and is difficult to be con-trolled effectively. At present, the molecular mechanism that confers resistance to this disease is unclear. Transcriptome sequencing is an important method to detect resistance genes, explore metabolic pathways, and study resistance mechanisms. In this study, the transcriptome of a disease-resistant inbred cot-ton line inoculated with Verticillium dahliae was sequenced. A total of 126,402 unigenes were obtained using de novo assembly and data analysis, 99,712 (78.88%) of which were annotated into the Nr, Nt, Swiss-Prot, KEGG, COG, and GO databases. The expression patterns of 16 candidate disease-resis-tance genes showed that some genes were upregulated soon after V. dahliae inoculation and others were upregulated later, which may indicate instanta-neous basal defense and lagged specific defense, respectively. We conducted a preliminary analysis of the transcriptome database, which will contribute to further research regarding the cloning of disease-resistance genes.

  3. Differential expression of genes regulated in response to drought stress in diploid cotton (Gossypium arboreum) (abstract)

    International Nuclear Information System (INIS)

    Hussain, T.; Majeed, A.; Maqbool, A.; Hussain, S.S.; Ali, T.; Riazuddin, S.

    2005-01-01

    Negative effects on the Water status of plants is one of the most common and deleterious stresses experienced by wild and cultivated plants throughout the World. Our project is designed to identify, clone and characterize gene sequences regulated in response to Water stress (e.g., drought). We used the differential-display reverse transcriptase polymerase chain reaction (DD-RT- PCA) methodology to accomplish our Objectives. Structural and functional characterization of environmental stress-induced genes has contributed to a better understanding of how plants respond and adapt to different abiotic stresses. Differential display was used to compare overall difference in gene expression between draught stressed and unstressed (control) plants of diploid Cotton (Gossypium arboreum). DDRT-PCR product from stressed and unstressed samples resolved side by side on 6% PAGE to compare qualitative and quantitative difference in mRNA expression. A total of 81 primer combinations were tested. DDRT -PCR enabled us to identify differentially expressed transcripts between water stressed and non-stressed cotton seedlings. PAGE revealed a total of 347 DNA transcripts in stressed samples (New Transcripts) while 110 down regulated and 209 up regulated DNA transcripts were also recorded. Similarly. 22 DNA transcripts were identified based on the comparative study of PAGE and Agarose gel electrophoresis. These sequences showed various degree homology With draught tolerant genes in the gene bank. (author)

  4. Structural analysis of Gossypium hirsutum fibers grown under greenhouse and hydroponic conditions.

    Science.gov (United States)

    Natalio, Filipe; Tahir, Muhammad Nawaz; Friedrich, Norman; Köck, Margret; Fritz-Popovski, Gerhard; Paris, Oskar; Paschke, Reinhard

    2016-06-01

    Cotton is the one of the world's most important crops. Like any other crop, cotton growth/development and fiber quality is highly dependent on environmental factors. Increasing global weather instability has been negatively impacting its economy. Cotton is a crop that exerts an intensive pressure over natural resources (land and water) and demands an overuse of pesticides. Thus, the search for alternative cotton culture methods that are pesticide-free (biocotton) and enable customized standard fiber quality should be encouraged. Here we describe a culture of Gossypium hirsutum ("Upland" Cotton) utilizing a greenhouse and hydroponics in which the fibers are morphological similar to conventional cultures and structurally fit into the classical two-phase cellulose I model with 4.19nm crystalline domains surrounded by amorphous regions. These fibers exhibit a single crystalline form of cellulose I-Iß, monoclinic unit cell. Fiber quality bulk analysis shows an improved length, strength, whiteness when compared with soil-based cultures. Finally, we show that our fibers can be spun, used for production of non-woven fabrics and indigo-vat stained demonstrating its potential in industrial and commercial applications. Copyright © 2016 Elsevier Inc. All rights reserved.

  5. Wood Anatomy and Insect Defoliator Systems: Is there an anatomical response to sustained feeding by the western spruce budworm (Choristoneura occidentalis) on Douglas-fir (Pseudotusga menziesii)?

    Science.gov (United States)

    Axelson, Jodi; Gärtner, Holger; Alfaro, René; Smith, Dan

    2013-04-01

    The western spruce budworm (Choristoneura occidentalis Freeman) is the most widespread and destructive defoliator of coniferous forests in western North America, and has a long-term coexistence with its primary host tree, Douglas-fir (Pseudotsuga menziesii Franco). Western spruce budworm (WSB) outbreaks usually last for several years, and cause reductions in annual growth, stem defects, and regeneration delays. In British Columbia, the WSB is the second most damaging insect after the mountain pine beetle, and sustained and/or severe defoliation can result in the mortality of host trees. Numerous studies have used tree rings to reconstruct WSB outbreaks across long temporal scales, to evaluate losses in stand productivity, and examine isotope ratios. Although some studies have looked at the impacts of artificial defoliation on balsam fir in eastern North America, there has been no prior research on how WSB outbreaks affect the anatomical structure of the stem as described by intra-annual wood density and potential cell size variations. The objective of this study was to anatomically examine the response of Douglas-fir to sustained WSB outbreaks in two regions of southern British Columbia. We hypothesize that the anatomical intra-annual characteristics of the tree rings, such as cell wall thickness, latewood cell size, and/or lumen area changes during sustained WSB outbreaks. To test this hypothesis we sampled four permanent sample plots in coastal and dry interior sites, which had annually resolved defoliation data collected over a 7-12 year period. At each site diameter-at-breast height (cm), height (m), and crown position were recorded and three increment cores were extracted from 25 trees. Increment cores were prepared to permit anatomical and x-ray density analyses. For each tree, a 15µm thick micro section was cut from the radial plane. Digital images of the micro sections were captured and processed. In each annual ring, features such as cell lumen area (µm2

  6. Transcriptome Sequencing and Differential Gene Expression Analysis of Delayed Gland Morphogenesis in Gossypium australe during Seed Germination

    Science.gov (United States)

    Tao, Tao; Zhao, Liang; Lv, Yuanda; Chen, Jiedan; Hu, Yan; Zhang, Tianzhen; Zhou, Baoliang

    2013-01-01

    The genus Gossypium is a globally important crop that is used to produce textiles, oil and protein. However, gossypol, which is found in cultivated cottonseed, is toxic to humans and non-ruminant animals. Efforts have been made to breed improved cultivated cotton with lower gossypol content. The delayed gland morphogenesis trait possessed by some Australian wild cotton species may enable the widespread, direct usage of cottonseed. However, the mechanisms about the delayed gland morphogenesis are still unknown. Here, we sequenced the first Australian wild cotton species ( Gossypium australe ) and a diploid cotton species ( Gossypium arboreum ) using the Illumina Hiseq 2000 RNA-seq platform to help elucidate the mechanisms underlying gossypol synthesis and gland development. Paired-end Illumina short reads were de novo assembled into 226,184, 213,257 and 275,434 transcripts, clustering into 61,048, 47,908 and 72,985 individual clusters with N50 lengths of 1,710 bp, 1544 BP and 1,743 bp, respectively. The clustered Unigenes were searched against three public protein databases (TrEMBL, SwissProt and RefSeq) and the nucleotide and protein sequences of Gossypium raimondii using BLASTx and BLASTn. A total of 21,987, 17,209 and 25,325 Unigenes were annotated. Of these, 18,766 (85.4%), 14,552 (84.6%) and 21,374 (84.4%) Unigenes could be assigned to GO-term classifications. We identified and analyzed 13,884 differentially expressed Unigenes by clustering and functional enrichment. Terpenoid-related biosynthesis pathways showed differentially regulated expression patterns between the two cotton species. Phylogenetic analysis of the terpene synthases family was also carried out to clarify the classifications of TPSs. RNA-seq data from two distinct cotton species provide comprehensive transcriptome annotation resources and global gene expression profiles during seed germination and gland and gossypol formation. These data may be used to further elucidate various mechanisms and

  7. Clustering, haplotype diversity and locations of MIC-3: a unique root-specific defense-related gene family in upland cotton (Gossypium hirsutum L.)

    Science.gov (United States)

    MIC-3-related genes of cotton (Gossypium spp.) were identified and shown to have root-specific expression, associated with pathogen defense-related function and specifically increased expression in root-knot nematode (RKN) resistant plants after nematode infection. Here we cloned and sequenced MIC-...

  8. Effects of rotation of cotton (Gossypium hirsutum L.) and soybean [Glycine max (L.) Merr.] crops on soil fertility in Elizabeth, Mississippi, USA

    Science.gov (United States)

    The effects of cotton (Gossypium hirsutum L.):soybean [Glycine max (L.) Merr.] rotations on the soil fertility levels are limited. An irrigated soybean:cotton rotation experiment was conducted from 2012 through 2015 near Elizabeth, MS. Rotation sequences were; continuous soybean, continuous cotton...

  9. Analysis of root-knot nematode and fusarium wilt disease resistance in cotton (Gossypium spp.) using chromosome substitution lines from two alien species

    Science.gov (United States)

    To Identify a new germplasm resource, and to validate chromosomal regions and favorable alleles associated with nematode and fungal disease resistance traits, a series of interspecific cotton (Gossypium spp.) chromosome substitution (CS) lines were used in this study. The CS lines were developed in ...

  10. Elevated CO2, warmer temperatures and soil water deficit affect plant growth, physiology and water use of cotton (Gossypium hirsutum L.)

    Science.gov (United States)

    Changes in temperature, atmospheric [CO2] and precipitation under the scenarios of projected climate change present a challenge to crop production, and may have significant impacts on the physiology, growth and yield of cotton (Gossypium hirsutum L.). A glasshouse experiment explored the early growt...

  11. The GhTT2_A07 gene is linked to the brown colour and natural flame retardancy phenotypes of Lc1 cotton (Gossypium hirsutum L.) fibres

    Science.gov (United States)

    Some naturally-coloured brown cotton fibres from accessions of Gossypium hirsutum can be used to make textiles with enhanced flame retardancy (FR). Several independent brown fibre loci have been identified and mapped to chromosomes, but the underlying genes have yet to be identified, and the mechan...

  12. Overexpression of MIC-3 indicates a direct role for the MIC gene family in mediating Upland cotton (Gossypium hirsutum) resistance to root-knot nematode (Meloidogyne incognita)

    Science.gov (United States)

    Major quantitative trait loci (QTL) have been mapped to Upland cotton (Gossypium hirsutum L.) chromosomes 11 and 14 that govern the highly resistant phenotype in response to infection by root-knot nematode (RKN; Meloidogyne incognita Chitwood & White); however, nearly nothing is known regarding the ...

  13. Genome-wide identification of ABA receptor PYL family and expression analysis of PYLs in response to ABA and osmotic stress in Gossypium

    Directory of Open Access Journals (Sweden)

    Gaofeng Zhang

    2017-12-01

    Full Text Available Abscisic acid (ABA receptor pyrabactin resistance1/PYR1-like/regulatory components of ABA receptor (PYR1/PYL/RCAR (named PYLs for simplicity are core regulators of ABA signaling, and have been well studied in Arabidopsis and rice. However, knowledge is limited about the PYL family regarding genome organization, gene structure, phylogenesis, gene expression and protein interaction with downstream targets in Gossypium. A comprehensive analysis of the Gossypium PYL family was carried out, and 21, 20, 40 and 39 PYL genes were identified in the genomes from the diploid progenitor G. arboretum, G. raimondii and the tetraploid G. hirsutum and G. barbadense, respectively. Characterization of the physical properties, chromosomal locations, structures and phylogeny of these family members revealed that Gossypium PYLs were quite conservative among the surveyed cotton species. Segmental duplication might be the main force promoting the expansion of PYLs, and the majority of the PYLs underwent evolution under purifying selection in Gossypium. Additionally, the expression profiles of GhPYL genes were specific in tissues. Transcriptions of many GhPYL genes were inhibited by ABA treatments and induced by osmotic stress. A number of GhPYLs can interact with GhABI1A or GhABID in the presence and/or absence of ABA by the yeast-two hybrid method in cotton.

  14. Rapid evolutionary divergence of Gossypium barbadense and G. hirsutum mitochondrial genomes.

    Science.gov (United States)

    Tang, Mingyong; Chen, Zhiwen; Grover, Corrinne E; Wang, Yumei; Li, Shuangshuang; Liu, Guozheng; Ma, Zhiying; Wendel, Jonathan F; Hua, Jinping

    2015-10-12

    The mitochondrial genome from upland cotton, G. hirsutum, was previously sequenced. To elucidate the evolution of mitochondrial genomic diversity within a single genus, we sequenced the mitochondrial genome from Sea Island cotton (Gossypium barbadense L.). Mitochondrial DNA from week-old etiolated seedlings was extracted from isolated organelles using discontinuous sucrose density gradient method. Mitochondrial genome was sequenced with Solexa using paired-end, 90 bp read. The clean reads were assembled into contigs using ABySS and finished via additional fosmid and BAC sequencing. Finally, the genome was annotated and analyzed using different softwares. The G. barbadense (Sea Island cotton) mitochondrial genome was fully sequenced (677,434-bp) and compared to the mitogenome of upland cotton. The G. barbadense mitochondrial DNA contains seven more genes than that of upland cotton, with a total of 40 protein coding genes (excluding possible pseudogenes), 6 rRNA genes, and 29 tRNA genes. Of these 75 genes, atp1, mttB, nad4, nad9, rrn5, rrn18, and trnD(GTC)-cp were each represented by two identical copies. A single 64 kb repeat was largely responsible for the 9 % difference in genome size between the two mtDNAs. Comparison of genome structures between the two mitochondrial genomes revealed 8 rearranged syntenic regions and several large repeats. The largest repeat was missing from the master chromosome in G. hirsutum. Both mitochondrial genomes contain a duplicated copy of rps3 (rps3-2) in conjunction with a duplication of repeated sequences. Phylogenetic and divergence considerations suggest that a 544-bp fragment of rps3 was transferred to the nuclear genome shortly after divergence of the A- and D- genome diploid cottons. These results highlight the insights to the evolution of structural variation between Sea Island and upland cotton mitochondrial genomes.

  15. The damaging effects of nitrogen ion beam implantation on upland cotton (Gossypium hirsutum L.) pollen grains

    Energy Technology Data Exchange (ETDEWEB)

    Yu Yanjie [College of Agronomy, Nanjing Agricultural University, Nanjing Jiangsu 210095 (China); Wu Lijun; Wu Yuejin [Key Laboratory of Ion Beam Bioengineering, Institute of Plasma Physics, Chinese Academy of Sciences, Hefei, Anhui 230031 (China); Wang Qingya [College of Life Science, Nanjing Agricultural University, Nanjing, Jiangsu 210095 (China); Tang Canming [College of Agronomy, Nanjing Agricultural University, Nanjing Jiangsu 210095 (China)], E-mail: tang20@jlonline.com

    2008-09-15

    With the aim to study the effects of an ion beam on plant cells, upland cotton (Gossypium hirsutum L.) cultivar 'Sumian 22' pollen grains were irradiated in vacuum (7.8 x 10{sup -3} Pa) by low-energy nitrogen ions with an energy of 20 keV at various fluences ranging from 0.26 x 10{sup 16} to 0.78 x 10{sup 16} N{sup +}/cm{sup 2}. The irradiation effects on pollen grains were tested, considering the ultrastructural changes in the exine and interior walls of pollen grains, their germination rate, the growth speed of the pollen tubes in the style, fertilization and boll development after the pistils were pollinated by the pollen grains which had been implanted with nitrogen ions. Nitrogen ions entered the pollen grains by etching and penetrating the exine and interior walls and destroying cell structures. A greater percentage of the pollen grains were destroyed as the fluence of N{sup +} ions increased. Obviously, the nitrogen ion beam penetrated the exine and interior walls of the pollen grains and produced holes of different sizes. As the ion fluence increased, the amount and the density of pollen grain inclusions decreased and the size of the lacuna and starch granules increased. Pollen grain germination rates decreased with increasing ion fluence. The number of pollen tubes in the style declined with increased ion implantation into pollen grains, but the growth speed of the tubes did not change. All of the pollen tubes reached the end of the style at 13 h after pollination. This result was consistent with that of the control. Also, the weight and the diameter of the ovary decreased and shortened with increased ion beam implantation fluence. No evident change in the fecundation time of the ovule was observed. These results indicate that nitrogen ions can enter pollen grains and cause a series of biological changes in pollen grains of upland cotton.

  16. Potassium-phosphorus relationships in cotton (gossypium hirsutum L.) as affected by potassium nutrition

    International Nuclear Information System (INIS)

    Makhdum, M.I.; Ashraf, M.

    2007-01-01

    Field studies were undertaken to determine the interrelationship between potassium (K+) concentration in various organs of plant and phosphorus (P) content as influenced by K-nutrition in cotton. The experiment was conducted on Miani soil series silt loam and classified as Calcaric Cambisols, fine silty, mixed Hyperthermic Fluventic Haplocambids. The treatments consisted .of (a) four cotton (Gossypium hirsutum L.) cultivars (CI.M-448, CIM-IIOO, Karishma, S-12); and (b) four potassium fertilizer doses (0, 62.5, 125.0, 250.0 kg K ha-l). The design of experiment was split plot (main: cultivars, sub-plot: K-doses). The plant samples were collected at five stages of growth, i.e., first flower bud., first flower, peak flowering, first boll split and maturity. The various parts of plants were analyzed for phosphorus and potassium concentration at various stages of growth. Phosphorus concentration in leaves, stems, burs, seed and lint decreased with concurrent increase in K-doses. Crop maintained 0.22% phosphorus concentration in leaf tissues at first flower bud and dropped to 0.11% at maturity. Cultivars differed greatly amongst themselves in terms of maintaining P content in their different parts. Averaged across K-doses, cv. CIM-448 maintained the highest P content in all parts than other cultivars. There was a negative and significant correlation co-efficient between K and P concentration in various parts of the plant. The study demonstrated antagonistic interaction between K+ and P in cotton plant under irrigated conditions. (author)

  17. Spatial and temporal variation in fungal endophyte communities isolated from cultivated cotton (Gossypium hirsutum.

    Directory of Open Access Journals (Sweden)

    María J Ek-Ramos

    Full Text Available Studies of fungi in upland cotton (Gossypium hirsutum cultivated in the United States have largely focused on monitoring and controlling plant pathogens. Given increasing interest in asymptomatic fungal endophytes as potential biological control agents, surveys are needed to better characterize their diversity, distribution patterns and possible applications in integrated pest management. We sampled multiple varieties of cotton in Texas, USA and tested for temporal and spatial variation in fungal endophyte diversity and community composition, as well as for differences associated with organic and conventional farming practices. Fungal isolates were identified by morphological and DNA identification methods. We found members of the genera Alternaria, Colletotrichum and Phomopsis, previously isolated as endophytes from other plant species. Other recovered species such as Drechslerella dactyloides (formerly Arthrobotrys dactyloides and Exserohilum rostratum have not, to our knowledge, been previously reported as endophytes in cotton. We also isolated many latent pathogens, but some species such as Alternaria tennuissima, Epicoccum nigrum, Acremonium alternatum, Cladosporium cladosporioides, Chaetomium globosum and Paecilomyces sp., are known to be antagonists against plant pathogens, insects and nematode pests. We found no differences in endophyte species richness or diversity among different cotton varieties, but did detect differences over time and in different plant tissues. No consistent patterns of community similarity associated with variety, region, farming practice, time of the season or tissue type were observed regardless of the ecological community similarity measurements used. Results indicated that local fungal endophyte communities may be affected by both time of the year and plant tissue, but the specific community composition varies across sites. In addition to providing insights into fungal endophyte community structure, our survey

  18. Characterization of indigenous gossypium arboreum L. genotypes for various fiber quality traits

    International Nuclear Information System (INIS)

    Iqbal, M. A.; Abbas, A.; Zafar, Y.

    2015-01-01

    Diploid cotton (Gossypium arboreum L.) being an Old World cultivated cotton species, evolved in Indo-Pak subcontinent, has been known for conferring resistance to biotic and abiotic stresses. To the extent of our knowledge, there is no comprehensive report available on the characterization of G. arboreum germplasm. Hence, the present study was conducted to characterize 26 G. arboreum genotypes by deploying univariate and multivariate analysis in 2010 at NIBGE, Faisalabad. All these genotypes were characterized for boll weight, GOT percentage, micronaire value, staple length, fiber bundle strength and uniformity index. Genotypic variation was significant (p<0.01) for all the analyzed traits except boll weight. Maximum boll weight (2.47g) was observed for genotype 23718. GOT ranged from 18.75% (Haroonabad) to 36.94 percentage (DC-116).The finest fiber was obtained from synthetic (4.37 micro g/inch) and this genotype also exhibited the higher values for staple length (23.81 mm) and fiber bundle strength (27.37 g/tex). Range for uniformity index was observed from 76.19 percentage (Garohill) to 77.98 percentage (212). Principal component analysis (PCA) exhibited that first five components accounted for >63 percentage of the total variability. Cluster analysis identified four groups based on their agronomic properties. Significant relationships among different traits can be useful to select best genotypes having good fiber quality traits. These genotypes may prove a valuable resource to fuel the breeding efforts for not only broadening the genetic base of the newly developed material but can also add synergy to various cotton genomic projects. (author)

  19. Genotypic variations in photosynthetic and physiological adjustment to potassium deficiency in cotton (Gossypium hirsutum).

    Science.gov (United States)

    Wang, Ning; Hua, Hanbai; Eneji, A Egrinya; Li, Zhaohu; Duan, Liusheng; Tian, Xiaoli

    2012-05-02

    A hydroponic culture experiment was conducted to determine genotypic variation in photosynthetic rate and the associated physiological changes in response to potassium (K) deficiency in cotton (Gossypium hirsutum L.) seedlings with contrasting two cotton cultivars in K efficiency. The K-efficient Liaomian18 produced 66.7% more biomass than the K-inefficient NuCOTN99(B) under K deficiency, despite their similar biomass under K sufficiency. Compared with NuCOTN99(B), Liaomian18 showed 19.4% higher net photosynthetic rate (P(n), per unit leaf area) under K deficient solutions and this was associated with higher photochemical efficiency and faster export of soluble sugars from the phloem. The lower net P(n) of NuCOTN99(B) was attributed to higher capacity for nitrate assimilation and lower export of soluble sugars. Furthermore, NuCOTN99(B) showed 38.4% greater ETR/P(n) than Liaomian18 under K deficiency, indicating that more electrons were driven to other sinks. Higher superoxide dismutase (SOD) and lower catalase (CAT) and ascorbate peroxidase (APX) activities resulted in higher levels of reactive oxygen species (ROS; e.g. O(2)(-)and H(2)O(2)) in NuCOTN99(B) relative to Liaomian18. Thus, the K inefficiency of NuCOTN99(B), indicated by lower biomass and net P(n) under K deficiency, was associated with excessively high nitrogen assimilation, lower export of carbon assimilates, and greater ROS accumulation in the leaf. Crown Copyright © 2012. Published by Elsevier B.V. All rights reserved.

  20. Genome-wide analysis of the GST gene family in Gossypium hirsutum L.

    Science.gov (United States)

    Xu, Lei; Chen, Wen; Si, Guo-Yang; Huang, Yi-Yuan; Lin, Yi; Cai, Yong-Ping; Gao, Jun-Shan

    2017-08-20

    Glutathione-S-transferase (GST) is a ubiquitous multi-functional protein superfamily that plays important roles in plant primary and secondary metabolism, stress and intercellular signal transduction. Concomitantly, it also functions as a ligand in the metabolism of plant hormones and substance transport. In order to understand the GST gene family in upland cotton (Gossypium hirsutum L.), herein we analyzed the species, evolutionary relationship, physical location, gene structure, conserved motifs and expression patterns. We identified 70 GST genes in the whole genome of upland cotton, and divided them into U, F, T, Z, EF1Bγ and TCHQD groups by phylogenetic tree and gene structure analyses. The gene mapping analysis indicated that the GST genes were on every chromosome except chromosome AD/At2, AD/At4, AD/At5, AD/Dt5 and AD/Dt10. Moreover, the GST gene cluster appeared on four chromosomes (AD/At9, AD/Dt7, AD/Dt12 and AD/Dt13). qRT-PCR assays showed that eight genes (GhGSTF2-9) were expressed in the root, stem, leave and fiber of different developmental stages while GhGSTF1 might be a pseudogene. Combining qRT-PCR and bioinformatic analysis, we speculated that GhGSTF8 might be involved in the transport and accumulation of proanthocyanidins/anthocyanins; GhGSTF4, 6 and 9 might play roles in regulating the growth and stress response of upland cotton; the function of GhGSTF2, 3, 5 and 7 remains to be further investigated. Our work provides a theoretical basis for further studies on the molecular evolution and function of the GST gene family in upland cotton.

  1. Identification of semiochemicals released by cotton, Gossypium hirsutum, upon infestation by the cotton aphid, Aphis gossypii.

    Science.gov (United States)

    Hegde, Mahabaleshwar; Oliveira, Janser N; da Costa, Joao G; Bleicher, Ervino; Santana, Antonio E G; Bruce, Toby J A; Caulfield, John; Dewhirst, Sarah Y; Woodcock, Christine M; Pickett, John A; Birkett, Michael A

    2011-07-01

    The cotton aphid, Aphis gossypii (Homoptera: Aphididae), is increasing in importance as a pest worldwide since the introduction of Bt-cotton, which controls lepidopteran but not homopteran pests. The chemical ecology of interactions between cotton, Gossypium hirsutum (Malvaceae), A. gossypii, and the predatory lacewing Chrysoperla lucasina (Neuroptera: Chrysopidae), was investigated with a view to providing new pest management strategies. Behavioral tests using a four-arm (Pettersson) olfactometer showed that alate A. gossypii spent significantly more time in the presence of odor from uninfested cotton seedlings compared to clean air, but significantly less time in the presence of odor from A. gossypii infested plants. A. gossypii also spent significantly more time in the presence of headspace samples of volatile organic compounds (VOCs) obtained from uninfested cotton seedlings, but significantly less time with those from A. gossypii infested plants. VOCs from uninfested and A. gossypii infested cotton seedlings were analyzed by gas chromatography (GC) and coupled GC-mass spectrometry (GC-MS), leading to the identification of (Z)-3-hexenyl acetate, (E)-4,8-dimethyl-1,3,7-nonatriene (DMNT), methyl salicylate, and (E,E)-4,8,12-trimethyl-1,3,7,11-tridecatetraene (TMTT), which were produced in larger amounts from A. gossypii infested plants compared to uninfested plants. In behavioral tests, A. gossypii spent significantly more time in the control (solvent) arms when presented with a synthetic blend of these four compounds, with and without the presence of VOCs from uninfested cotton. Coupled GC-electroantennogram (EAG) recordings with the lacewing C. lucasina showed significant antennal responses to VOCs from A. gossypii infested cotton, suggesting they have a role in indirect defense and indicating a likely behavioral role for these compounds for the predator as well as the aphid.

  2. Structure, expression differentiation and evolution of duplicated fiber developmental genes in Gossypium barbadense and G. hirsutum.

    Science.gov (United States)

    Zhu, Huayu; Han, Xiaoyong; Lv, Junhong; Zhao, Liang; Xu, Xiaoyang; Zhang, Tianzhen; Guo, Wangzhen

    2011-02-25

    Both Gossypium hirsutum and G. barbadense probably originated from a common ancestor, but they have very different agronomic and fiber quality characters. Here we selected 17 fiber development-related genes to study their structures, tree topologies, chromosomal location and expression patterns to better understand the interspecific divergence of fiber development genes in the two cultivated tetraploid species. The sequence and structure of 70.59% genes were conserved with the same exon length and numbers in different species, while 29.41% genes showed diversity. There were 15 genes showing independent evolution between the A- and D-subgenomes after polyploid formation, while two evolved via different degrees of colonization. Chromosomal location showed that 22 duplicate genes were located in which at least one fiber quality QTL was detected. The molecular evolutionary rates suggested that the D-subgenome of the allotetraploid underwent rapid evolutionary differentiation, and selection had acted at the tetraploid level. Expression profiles at fiber initiation and early elongation showed that the transcripts levels of most genes were higher in Hai7124 than in TM-1. During the primary-secondary transition period, expression of most genes peaked earlier in TM-1 than in Hai7124. Homeolog expression profile showed that A-subgenome, or the combination of A- and D-subgenomes, played critical roles in fiber quality divergence of G. hirsutum and G. barbadense. However, the expression of D-subgenome alone also played an important role. Integrating analysis of the structure and expression to fiber development genes, suggests selective breeding for certain desirable fiber qualities played an important role in divergence of G. hirsutum and G. barbadense.

  3. The damaging effects of nitrogen ion beam implantation on upland cotton ( Gossypium hirsutum L.) pollen grains

    Science.gov (United States)

    Yu, Yanjie; Wu, Lijun; Wu, Yuejin; Wang, Qingya; Tang, Canming

    2008-09-01

    With the aim to study the effects of an ion beam on plant cells, upland cotton (Gossypium hirsutum L.) cultivar "Sumian 22" pollen grains were irradiated in vacuum (7.8 × 10-3 Pa) by low-energy nitrogen ions with an energy of 20 keV at various fluences ranging from 0.26 × 1016 to 0.78 × 1016 N+/cm2. The irradiation effects on pollen grains were tested, considering the ultrastructural changes in the exine and interior walls of pollen grains, their germination rate, the growth speed of the pollen tubes in the style, fertilization and boll development after the pistils were pollinated by the pollen grains which had been implanted with nitrogen ions. Nitrogen ions entered the pollen grains by etching and penetrating the exine and interior walls and destroying cell structures. A greater percentage of the pollen grains were destroyed as the fluence of N+ ions increased. Obviously, the nitrogen ion beam penetrated the exine and interior walls of the pollen grains and produced holes of different sizes. As the ion fluence increased, the amount and the density of pollen grain inclusions decreased and the size of the lacuna and starch granules increased. Pollen grain germination rates decreased with increasing ion fluence. The number of pollen tubes in the style declined with increased ion implantation into pollen grains, but the growth speed of the tubes did not change. All of the pollen tubes reached the end of the style at 13 h after pollination. This result was consistent with that of the control. Also, the weight and the diameter of the ovary decreased and shortened with increased ion beam implantation fluence. No evident change in the fecundation time of the ovule was observed. These results indicate that nitrogen ions can enter pollen grains and cause a series of biological changes in pollen grains of upland cotton.

  4. Selectivity and stability of vegetation-applied herbicides in cotton (Gossypium hirsutum L.

    Directory of Open Access Journals (Sweden)

    T. Barakova

    2016-06-01

    Full Text Available Abstract. An experiment was carried out during 2013 – 2015 in the experimental field of the Field Crops Institute, Chirpan, with two cotton cultivars − Helius and Darmi (Gossypium hirsutum L.. Herbicides: Goal 2 E, oxyfluorfen (80 ml/da; Linuron 45 SC, linuron (200 ml/da; Wing-P, pendimethalin + dimethenamid (400 ml/da; Merlin 750 WG, isoxaflutol (5 g/da; Bazagran 480 SL, bentazone (150 ml/da were investigated. They were treated separately or combined with growth regulator Amalgerol (500 ml/da or foliar fertilizer Lactofol O (500 ml/da in the budding stage of the cotton. It was established that selectivity is the lowest in the two cotton cultivars with herbicides Linuron 45 CK and Merlin 750 WG. The purpose of this investigation was to establish the selectivity and stability of some herbicides and their tank mixtures on the cotton by influence of different meteorological conditions. It has been found that the highest phytotoxicity on cotton is given the vegetation-applied herbicides Merlin and Linuron. Foliar fertilizer Laktofol O reduces phytotoxicity of herbicides Goal, Wing, Merlin and Bazagran in two cotton cultivars. Herbicides Wing and Bazagran have excellent selectivity for the two cotton cultivars – Helius and Darmi. The highest yield was obtained by vegetation treatment with herbicide Bazagran, followed by herbicides Wing and Goal. Tank mixtures of Goal, Bazagran and Wing with Laktofol, followed by those with Amalgerol are technologically the most valuable. They combine high yield with high stability over the years. Аlone application of herbicides Linuron and Merlin and their tank mixtures with Amalgerol and Laktofol have low estimate.

  5. Construction of microsatellite-based linkage map and mapping of nectarilessness and hairiness genes in Gossypium tomentosum.

    Science.gov (United States)

    Hou, Meiying; Cai, Caiping; Zhang, Shuwen; Guo, Wangzhen; Zhang, Tianzhen; Zhou, Baoliang

    2013-12-01

    Gossypium tomentosum, a wild tetraploid cotton species with AD genomes, possesses genes conferring strong fibers and high heat tolerance. To effectively transfer these genes into Gossypium hirsutum, an entire microsatellite (simple sequence repeat, SSR)-based genetic map was constructed using the interspecific cross of G. hirsutum x G. tomentosum (HT). We detected 1800 loci from 1347 pairs of polymorphic primers. Of these, 1204 loci were grouped into 35 linkage groups at LOD ≥ 4. The map covers 3320.8 cM, with a mean density of 2.76 cM per locus. We detected 420 common loci (186 in the At subgenome and 234 in Dt) between the HT map and the map of TM-1 (G. hirsutum) and Hai 7124 (G. barbadense; HB map). The linkage groups were assigned chromosome numbers based on location of common loci and the HB map as reference. A comparison of common markers revealed that no significant chromosomal rearrangement exist between G. tomentosum and G. barbadense. Interestingly, however, we detected numerous (33.7%) segregation loci deviating from 3:1 ratio (P constructed in this study will be useful for further genetic studies on cotton breeding, including mapping loci controlling quantitative traits associated with fiber quality, stress tolerance and developing chromosome segment specific introgression lines from G. tomentosum into G. hirsutum using marker-assisted selection.

  6. Isolation and characterization of drought-related trehalose 6-phosphate-synthase gene from cultivated cotton (Gossypium hirsutum L.).

    Science.gov (United States)

    Kosmas, Sotirios A; Argyrokastritis, Alexandros; Loukas, Michael G; Eliopoulos, Elias; Tsakas, Spyros; Kaltsikes, Pantouses J

    2006-01-01

    Due to the important role of cotton drought-tolerant varieties and the reported involvement in this trait of trehalose-6-phosphate-synthase, the respective gene (TPS) was isolated and characterized from cultivated cotton, Gossypium hirsutum (ZETA 2 cultivar), using a chromosome-walking technique. TPS has three exons comprising the coding region. Southern blot analysis indicated that the Gossypium genomes (A and D) contain a single copy of TPS per genome. In addition, the expression of this gene was studied in different plant tissues. Plants of the Australian cotton variety Siokra L23, known for its drought tolerance, were subjected to drought stress (using PEG 6,000 solution, for 4 h during the dark period of the day and for four consecutive days); leaves, stems and roots were collected after the end of the stress period. Total extracted RNA was examined for the presence of transcripts, in the above-mentioned tissues of stressed and well-watered plants, by reverse transcription-polymerase chain reaction (RT-PCR). The expression levels, determined semi-quantitatively, indicated that the gene was expressed in all plant tissues under both water availability conditions. However, increased expression levels of TPS were observed mainly in stressed leaves and roots compared to those of the well-watered control. This finding is in agreement with the fact that TPS participates in trehalose biosynthesis, known for its participation in stress signal transduction in higher plants.

  7. UJI KETAHANAN BEBERAPA GALUR KAPAS (Gossypium hirsutum HASIL RADIASI TERHADAP SERANGGA HAMA PENGGEREK BUAH Helicoverpa armigera(Hǖbner

    Directory of Open Access Journals (Sweden)

    Dwi Sunarto

    2015-09-01

    Full Text Available Uji  ketahanan beberapa galur kapas (Gossypium hirsutum terhadap  penggerek buah Helicoverpa armigera (Hǖbner dilaksanakan di laboratorium Entomologi Balai Penelitian Tanaman Pemanis dan Serat Malang pada bulan Januari sampai dengan Mei 2011. Penelitian bertujuan untuk mengevaluasi ketahanan beberapa galur kapas hasil radiasi terhadap penggerek buah H. armigera.  Perlakuan disusun menggunakan Rancangan Acak Kelompok (RAK yang terdiri atas empat galur hasil radiasi yaitu galur IA, 2A, 4A, dan 2C, dua varietas hasil radiasi yaitu Karisma, NIAB, dan dua varietas hasil pemuliaan konvensional yaitu Kanesia 10 dan Kanesia 15.  Setiap perlakuan diulang 3 kali.  Pengujian dilakukan dengan cara uji pakan (feeding assay daun, kuncup daun, dan buah muda sesuai dengan perkembangan larva H. armigera.  Larva instar I, instar II-III, dan instar IV-V berturut-turut diberikan daun muda, kuncup bunga, dan buah muda. Hasil penelitian menunjukkan bahwa galur kapas nomor 1A, 2A, 4A, dan 4C merupakan galur yang toleran terhadap H. armigera.  Kata kunci : Gossypium hirsutum, Helicoverpa armigera,   ketahanan  varietas.

  8. Thidiazuron induced micropropagation of Hypericum triquetrifolium ...

    African Journals Online (AJOL)

    Hypericum genus is commonly used as a medicinal plant for its anti-depressant properties. Harvesting such medicinal plants from the nature is causing a loss of genetic diversity. Plants with very small seeds like Hypericum triquetrifolium Turra cannot be cultured by traditional methods, easily. In the present study, a rapid ...

  9. Effects of artificial defoliation of pines on the structure and physiology of the soil fungal community of a mixed pine-spruce forest

    Science.gov (United States)

    Cullings, Ken; Raleigh, Christopher; New, Michael H.; Henson, Joan

    2005-01-01

    Loss of photosynthetic area can affect soil microbial communities by altering the availability of fixed carbon. We used denaturing gradient gel electrophoresis (DGGE) and Biolog filamentous-fungus plates to determine the effects of artificial defoliation of pines in a mixed pine-spruce forest on the composition of the fungal community in a forest soil. As measured by DGGE, two fungal species were affected significantly by the defoliation of pines (P < 0.001); the frequency of members of the ectomycorrhizal fungus genus Cenococcum decreased significantly, while the frequency of organisms of an unidentified soil fungus increased. The decrease in the amount of Cenococcum organisms may have occurred because of the formation of extensive hyphal networks by species of this genus, which require more of the carbon fixed by their host, or because this fungus is dependent upon quantitative differences in spruce root exudates. The defoliation of pines did not affect the overall composition of the soil fungal community or fungal-species richness (number of species per core). Biolog filamentous-fungus plate assays indicated a significant increase (P < 0.001) in the number of carbon substrates utilized by the soil fungi and the rate at which these substrates were used, which could indicate an increase in fungal-species richness. Thus, either small changes in the soil fungal community give rise to significant increases in physiological capabilities or PCR bias limits the reliability of the DGGE results. These data indicate that combined genetic and physiological assessments of the soil fungal community are needed to accurately assess the effect of disturbance on indigenous microbial systems.

  10. Effects of artificial defoliation of pines on the structure and physiology of the soil fungal community of a mixed pine-spruce forest

    Science.gov (United States)

    Cullings, Ken; Raleigh, Christopher; New, Michael H.; Henson, Joan

    2005-01-01

    Loss of photosynthetic area can affect soil microbial communities by altering the availability of fixed carbon. We used denaturing gradient gel electrophoresis (DGGE) and Biolog filamentous-fungus plates to determine the effects of artificial defoliation of pines in a mixed pine-spruce forest on the composition of the fungal community in a forest soil. As measured by DGGE, two fungal species were affected significantly by the defoliation of pines (P the frequency of members of the ectomycorrhizal fungus genus Cenococcum decreased significantly, while the frequency of organisms of an unidentified soil fungus increased. The decrease in the amount of Cenococcum organisms may have occurred because of the formation of extensive hyphal networks by species of this genus, which require more of the carbon fixed by their host, or because this fungus is dependent upon quantitative differences in spruce root exudates. The defoliation of pines did not affect the overall composition of the soil fungal community or fungal-species richness (number of species per core). Biolog filamentous-fungus plate assays indicated a significant increase (P the number of carbon substrates utilized by the soil fungi and the rate at which these substrates were used, which could indicate an increase in fungal-species richness. Thus, either small changes in the soil fungal community give rise to significant increases in physiological capabilities or PCR bias limits the reliability of the DGGE results. These data indicate that combined genetic and physiological assessments of the soil fungal community are needed to accurately assess the effect of disturbance on indigenous microbial systems.

  11. Effect of harvesting with a trunk shaker and an abscission chemical on fruit detachment and defoliation of citrus grown under Mediterranean conditions

    Energy Technology Data Exchange (ETDEWEB)

    Moreno, R.; Torregrosa, A.; Moltó, E.; Chueca, P.

    2015-07-01

    Spain ranks as the world’s leading exporter of citrus for fresh consumption. Manual harvest accounts for 50% of the total production costs. Mechanical harvest would increase labor productivity and benefits of growers. Efficiency of these machines depends on the varieties and operating conditions. Use of abscission chemicals has been promoted to increase the detachment rate of fruit without affecting its quality. This work is aimed at studying whether the mechanical harvest and/or the application of an abscission agent affect the quality and quantity of harvested fruit and tree defoliation under the conditions of citrus cultivation in Spain. Trials were made in a completely randomized experimental design. From 2008 to 2011, different orchards of mandarin and orange trees were sprayed with different doses of ethephon as abscission agent and harvested with a trunk shaker. Harvest related variables (detachment percentage, defoliation and fruit without calyx) were measured. The percentage of fruit detached by the trunk shaker ranged between 70 and 85% and it did not depend on the orchard. The shaker produced minimal damage to the bark when gripped incorrectly. Increased doses of ethephon increased fruit detachment except in ‘Clemenules’ orchard, but also increased the fruit without calyx in 1-9%. Moreover, ethephon promoted significant defoliation. Neither gummosis nor death of branches was observed. This work demonstrates that mechanical harvesting with trunk shakers may be a feasible solution for citrus cultivated in Spain for fresh market. Use of ethephon could only be recommended for citrus destined to industry and only for certain varieties. (Author)

  12. Effect of harvesting with a trunk shaker and an abscission chemical on fruit detachment and defoliation of citrus grown under Mediterranean conditions

    Directory of Open Access Journals (Sweden)

    Rosana Moreno

    2015-03-01

    Full Text Available Spain ranks as the world’s leading exporter of citrus for fresh consumption. Manual harvest accounts for 50% of the total production costs. Mechanical harvest would increase labor productivity and benefits of growers. Efficiency of these machines depends on the varieties and operating conditions. Use of abscission chemicals has been promoted to increase the detachment rate of fruit without affecting its quality. This work is aimed at studying whether the mechanical harvest and/or the application of an abscission agent affect the quality and quantity of harvested fruit and tree defoliation under the conditions of citrus cultivation in Spain. Trials were made in a completely randomized experimental design. From 2008 to 2011, different orchards of mandarin and orange trees were sprayed with different doses of ethephon as abscission agent and harvested with a trunk shaker. Harvest related variables (detachment percentage, defoliation and fruit without calyx were measured. The percentage of fruit detached by the trunk shaker ranged between 70 and 85% and it did not depend on the orchard. The shaker produced minimal damage to the bark when gripped incorrectly. Increased doses of ethephon increased fruit detachment except in ‘Clemenules’ orchard, but also increased the fruit without calyx in 1-9%. Moreover, ethephon promoted significant defoliation. Neither gummosis nor death of branches was observed. This work demonstrates that mechanical harvesting with trunk shakers may be a feasible solution for citrus cultivated in Spain for fresh market. Use of ethephon could only be recommended for citrus destined to industry and only for certain varieties.

  13. Mortality of the defoliator Euselasia eucerus (Lepidoptera: Riodinidae) by biotic factors in an Eucalyptus urophylla plantation in Minas Gerais State, Brazil.

    Science.gov (United States)

    Zanuncio, José C; Torres, Jorge B; Sediyama, Camilla A Z; Pereira, Fabricio F; Pastori, Patrik L; Wermelinger, Eduardo D; Ramalho, Francisco S

    2009-03-01

    Euselasia eucerus (Hewitson, 1872) (Lepidoptera: Riodinidae) is a Brazilian native species commonly found in Eucalyptus plantations. Biotic mortality factors of this defoliator were studied in a Eucalyptus urophylla plantation in Minas Gerais State, Brazil aiming to identify natural enemies and their impact on this insect. Euselasia eucerus had biotic mortality factors during all development stages. The most important were Trichogramma maxacalii Voegelé and Pointel, 1980 (Hymenoptera: Trichogrammatidae) during egg stage (48.9%), a tachinid fly (Diptera: Tachinidae) during larval stages (10%) and Itoplectis sp. (Hymenoptera: Ichneumonidae) during pupal stage (52.2%). The parasitism rate was higher in the basal part of the plant canopy (37.8%).

  14. First occurrence of Alcaeorrhynchus grandis (Dallas) (Hemiptera: Pentatomidae) preying on defoliating caterpillars of oil palm in the state of Para, Brazil; Primeira ocorrencia de Alcaeorrhynchus grandis (Dallas) (Hemiptera: Pentatomidae) predando lagartas desfolhadoras do dendezeiro no estado do Para, Brasil

    Energy Technology Data Exchange (ETDEWEB)

    Ribeiro, Rafael C.; Lemos, Walkymario P.; Muller, Antonio A. [EMBRAPA Amazonia Oriental, Belem, PA (Brazil). Lab. de Entomologia], e-mail: rafaufra@yahoo.com.br, e-mail: wplemos@cpatu.embrapa.br; Muller, Antonio A. [Embrapa Amazonia Oriental, Belem, PA (Brazil). Lab. de Entomologia; Bernardino, Aline S.; Buecke, Joel [Grupo Agropalma S/A., Tailandia, PA (Brazil)

    2010-01-15

    The oil palm Elaeis guineensis is usually attacked by pests, particularly, defoliating caterpillars. Between 2004 and 2006 a stinkbug predator (Asopinae) was registered preying on caterpillars of Brassolis sophorae L., Opsiphanes invirae Hubner (Lepidoptera: Nymphalidae) and Sibine spp. (Lepidoptera: Limacodidae), reducing their populations in commercial oil palm plantations in the State of Para, Brazil. Specimens of the natural enemy were collected, mounted, and identified as Alcaeorrhynchus grandis (Dallas) (Hemiptera: Pentatomidae), corresponding to the first report of the occurrence of this stinkbug attacking defoliating caterpillars of oil palm in Brazil. (author)

  15. Development of chromosome-specific markers with high polymorphism for allotetraploid cotton based on genome-wide characterization of simple sequence repeats in diploid cottons (Gossypium arboreum L. and Gossypium raimondii Ulbrich).

    Science.gov (United States)

    Lu, Cairui; Zou, Changsong; Zhang, Youping; Yu, Daoqian; Cheng, Hailiang; Jiang, Pengfei; Yang, Wencui; Wang, Qiaolian; Feng, Xiaoxu; Prosper, Mtawa Andrew; Guo, Xiaoping; Song, Guoli

    2015-02-06

    Tetraploid cotton contains two sets of homologous chromosomes, the At- and Dt-subgenomes. Consequently, many markers in cotton were mapped to multiple positions during linkage genetic map construction, posing a challenge to anchoring linkage groups and mapping economically-important genes to particular chromosomes. Chromosome-specific markers could solve this problem. Recently, the genomes of two diploid species were sequenced whose progenitors were putative contributors of the At- and Dt-subgenomes to tetraploid cotton. These sequences provide a powerful tool for developing chromosome-specific markers given the high level of synteny among tetraploid and diploid cotton genomes. In this study, simple sequence repeats (SSRs) on each chromosome in the two diploid genomes were characterized. Chromosome-specific SSRs were developed by comparative analysis and proved to distinguish chromosomes. A total of 200,744 and 142,409 SSRs were detected on the 13 chromosomes of Gossypium arboreum L. and Gossypium raimondii Ulbrich, respectively. Chromosome-specific SSRs were obtained by comparing SSR flanking sequences from each chromosome with those from the other 25 chromosomes. The average was 7,996 per chromosome. To confirm their chromosome specificity, these SSRs were used to distinguish two homologous chromosomes in tetraploid cotton through linkage group construction. The chromosome-specific SSRs and previously-reported chromosome markers were grouped together, and no marker mapped to another homologous chromosome, proving that the chromosome-specific SSRs were unique and could distinguish homologous chromosomes in tetraploid cotton. Because longer dinucleotide AT-rich repeats were the most polymorphic in previous reports, the SSRs on each chromosome were sorted by motif type and repeat length for convenient selection. The primer sequences of all chromosome-specific SSRs were also made publicly available. Chromosome-specific SSRs are efficient tools for chromosome

  16. Transcriptome analysis of Gossypium hirsutum flower buds infested by cotton boll weevil (Anthonomus grandis) larvae.

    Science.gov (United States)

    Artico, Sinara; Ribeiro-Alves, Marcelo; Oliveira-Neto, Osmundo Brilhante; de Macedo, Leonardo Lima Pepino; Silveira, Sylvia; Grossi-de-Sa, Maria Fátima; Martinelli, Adriana Pinheiro; Alves-Ferreira, Marcio

    2014-10-04

    Cotton is a major fibre crop grown worldwide that suffers extensive damage from chewing insects, including the cotton boll weevil larvae (Anthonomus grandis). Transcriptome analysis was performed to understand the molecular interactions between Gossypium hirsutum L. and cotton boll weevil larvae. The Illumina HiSeq 2000 platform was used to sequence the transcriptome of cotton flower buds infested with boll weevil larvae. The analysis generated a total of 327,489,418 sequence reads that were aligned to the G. hirsutum reference transcriptome. The total number of expressed genes was over 21,697 per sample with an average length of 1,063 bp. The DEGseq analysis identified 443 differentially expressed genes (DEG) in cotton flower buds infected with boll weevil larvae. Among them, 402 (90.7%) were up-regulated, 41 (9.3%) were down-regulated and 432 (97.5%) were identified as orthologues of A. thaliana genes using Blastx. Mapman analysis of DEG indicated that many genes were involved in the biotic stress response spanning a range of functions, from a gene encoding a receptor-like kinase to genes involved in triggering defensive responses such as MAPK, transcription factors (WRKY and ERF) and signalling by ethylene (ET) and jasmonic acid (JA) hormones. Furthermore, the spatial expression pattern of 32 of the genes responsive to boll weevil larvae feeding was determined by "in situ" qPCR analysis from RNA isolated from two flower structures, the stamen and the carpel, by laser microdissection (LMD). A large number of cotton transcripts were significantly altered upon infestation by larvae. Among the changes in gene expression, we highlighted the transcription of receptors/sensors that recognise chitin or insect oral secretions; the altered regulation of transcripts encoding enzymes related to kinase cascades, transcription factors, Ca2+ influxes, and reactive oxygen species; and the modulation of transcripts encoding enzymes from phytohormone signalling pathways. These

  17. Gene expression in developing fibres of Upland cotton (Gossypium hirsutum L.) was massively altered by domestication.

    Science.gov (United States)

    Rapp, Ryan A; Haigler, Candace H; Flagel, Lex; Hovav, Ran H; Udall, Joshua A; Wendel, Jonathan F

    2010-11-15

    Understanding the evolutionary genetics of modern crop phenotypes has a dual relevance to evolutionary biology and crop improvement. Modern upland cotton (Gossypium hirsutum L.) was developed following thousands of years of artificial selection from a wild form, G. hirsutum var. yucatanense, which bears a shorter, sparser, layer of single-celled, ovular trichomes ('fibre'). In order to gain an insight into the nature of the developmental genetic transformations that accompanied domestication and crop improvement, we studied the transcriptomes of cotton fibres from wild and domesticated accessions over a developmental time course. Fibre cells were harvested between 2 and 25 days post-anthesis and encompassed the primary and secondary wall synthesis stages. Using amplified messenger RNA and a custom microarray platform designed to interrogate expression for 40,430 genes, we determined global patterns of expression during fibre development. The fibre transcriptome of domesticated cotton is far more dynamic than that of wild cotton, with over twice as many genes being differentially expressed during development (12,626 versus 5273). Remarkably, a total of 9465 genes were diagnosed as differentially expressed between wild and domesticated fibres when summed across five key developmental time points. Human selection during the initial domestication and subsequent crop improvement has resulted in a biased upregulation of components of the transcriptional network that are important for agronomically advanced fibre, especially in the early stages of development. About 15% of the differentially expressed genes in wild versus domesticated cotton fibre have no homology to the genes in databases. We show that artificial selection during crop domestication can radically alter the transcriptional developmental network of even a single-celled structure, affecting nearly a quarter of the genes in the genome. Gene expression during fibre development within accessions and expression

  18. Variations in physicochemical attributes of seed oil among different varieties of cotton (gossypium hirsutum l.)

    International Nuclear Information System (INIS)

    Kouser, S.; Mahmood, K.

    2015-01-01

    Variation in the physicochemical attributes of the seeds and the extracted seed oils from six varieties (CIM-496, N-121, Z-33, AA-802, Desi, and CIM-534) of cotton (Gossypium hirsutum L.) were appraised. The amount of oil and protein in the tested seeds varied from 15.06 to 18.35% and 20.42 and 27.03%, respectively revealing a significant (p<0.05) differences among varieties analyzed while the contents of fiber (20.65-21.31%), ash (3.46-4.64%) and moisture (6.36-8.44%) did not vary considerably.The physicochemical properties including density (24 degree C) 0.9154-0.9207 mg/mL, refractive index (40 degree C) 1.4607-1.4632, iodine value 100.54-108.73 I/100g of oil, saponification value 180.39-190.28 (mg of KOH/g of oil), unsaponifiable matter 0.49-0.58%, free fatty acids content 0.71-1.24%, and color 12.01-13.04 R +63.61-68.11Y of the extracted cottonseed oils (CSOs) indicated a slight variation among varieties selected. The oxidation parameters of CSOs, as assessed by estimation of conjugated dienes, conjugated trienes, peroxide value, para-anisidine and induction period (Rancimat, 20 L/ h, 120 degree C), were noted to be 2.32-2.61, 0.91-0.99, 1.81-1.98 (meq/ kg of oil), 2.00-2.3 and 3.19-3.61 h, respectively. The tested CSOs mainly contained linoleic acid (48.96-50.46%), followed by palmitic acid (24.42-25.80%), oleic acid (17.81-23.15%) and stearic acid (2.49-2.81%). The contents of alpha (125.47-296.20), gama (269.23-326.21) and zeta (2.23-5.47 mg/kg) tocopherols among CSOs varied significantly. In conclusion, some of the physicochemical parameters of the oils varied significantly (p<0.05) among varieties selected that might be attributed to the different genetic makeup of the cotton plants. The results of this study can be useful for the selection of an appropriate cotton variety in the specified area. (author)

  19. Genetic variation and heritability for cotton seed, fiber and oil traits in gossypium hirsutum

    International Nuclear Information System (INIS)

    Khan, N.U.; Farhatullah; Batool, S.; Makhdoom, K.; Marwat, K.B.; Hassan, G.; Ahmad, W.; Khan, H.U.

    2010-01-01

    The research work pertaining to the study of genetic variability, heritability, genetic gain and correlation for cottonseed, fiber and cottonseed oil % in Gossypium hirsutum cultivars was conducted during 2005 at NWFP Agricultural University Peshawar, Pakistan. Analysis of variance manifested highly significant differences among the genotypes for all the traits except seeds per locule. Genetic potential range of eight cotton cultivars for different parameters was recorded i.e. seeds locule-1 (6.33 to 6.60), seeds boll-1 (26.10 to 28.47), seed index (8.61 to 9.69 g), lint index (5.35 to 6.05 g), lint % (35.17 to 38.13 %), seed cotton yield (1200 to 2450 kg ha/sup -1/) and cottonseed oil % (27.52 to 30.15%). Genetic variances were found almost greater than the environmental variances for all the traits except seeds locule-1 and seed index. High broad sense heritability and selection response were also formulated for seeds boll-1 (0.67, 0.84), seed index (0.77, 0.47 g), lint index (0.96, 0.33 g), lint % (0.96, 1.66 %), seed cotton yield (0.98, 643.16 kg) and cottonseed oil % (0.87, 1.28 %), respectively. Correlation of yield with other traits was found positive for majority of traits except seeds locule-1 and cotton seed oil %. Seed cotton yield is our ultimate goal in growing cotton besides lint %. Highest seed cotton yield was recorded in CIM-499 followed by CIM-473, CIM-496 and CIM-506 and were also found as the second and third top scoring genotypes for seeds per boll, seed index, lint % and cottonseed oil %. Cultivar SLH-279 performed better for lint index, lint % and oil %. This type of correlation is rarely found and ultra desirable by the cotton breeders and a little genetic gain in seed and lint traits, and oil content is a great accomplishment. (author)

  20. Identification and characterization of CONSTANS-like (COL) gene family in upland cotton (Gossypium hirsutum L.).

    Science.gov (United States)

    Cai, Darun; Liu, Hui; Sang, Na; Huang, Xianzhong

    2017-01-01

    The CONSTANS/FLOWERING LOCUS T (CO/FT) regulon plays a central role in the control of flowering time in photoperiod-sensitive plants. Flowering time in wild cotton (Gossypium spp.) has strict photoperiod sensitivity, but domesticated cotton is day-neutral. Information on the molecular characterization of the CO and CO-like (COL) genes in cotton is very limited. In this study, we identified 42 COL homologs (GhCOLs) in the G. hirsutum genome, and many of them were previously unreported. We studied their chromosome distribution, phylogenetic relationships, and structures of genes and proteins. Our results showed that GhCOLs were classified into three groups, and 14 COLs in group I showed conserved structure when compared with other plants. Two homoeologous pairs, GhCOL1-A and GhCOL1-D in Group I, showed the highest sequence similarity to Arabidopsis thaliana CO and rice CO homologous gene Heading date1 (Hd1). Tissue-specific expression showed that 42 GhCOL genes may function as tissue-specific regulators in different cells or organs. We cloned and sequenced the 14 GhCOL genes in Group I related to flowering induction to study their diurnal expression pattern, and found that their expression showed distinct circadian regulation. Most of them peaked at dawn and decreased rapidly to their minima at dusk, then started to accumulate until following dawn under long- or short-day conditions. Transgenic study in the Arabidopsis co-2 mutant demonstrated that GhCOL1-A and GhCOL1-D fully rescued the late-flowering phenotype, whereas GhCOL3-A, GhCOL3-D, GhCOL7-A, and GhCOL7-D partially rescued the late-flowering phenotype, and the other five homoeologous pairs in Group I did not promote flowering. These results indicate that GhCOL1-A and GhCOL1-D were potential flowering inducers, and are candidate genes for research in flowering regulation in cotton.

  1. Identification and characterization of CONSTANS-like (COL gene family in upland cotton (Gossypium hirsutum L..

    Directory of Open Access Journals (Sweden)

    Darun Cai

    Full Text Available The CONSTANS/FLOWERING LOCUS T (CO/FT regulon plays a central role in the control of flowering time in photoperiod-sensitive plants. Flowering time in wild cotton (Gossypium spp. has strict photoperiod sensitivity, but domesticated cotton is day-neutral. Information on the molecular characterization of the CO and CO-like (COL genes in cotton is very limited. In this study, we identified 42 COL homologs (GhCOLs in the G. hirsutum genome, and many of them were previously unreported. We studied their chromosome distribution, phylogenetic relationships, and structures of genes and proteins. Our results showed that GhCOLs were classified into three groups, and 14 COLs in group I showed conserved structure when compared with other plants. Two homoeologous pairs, GhCOL1-A and GhCOL1-D in Group I, showed the highest sequence similarity to Arabidopsis thaliana CO and rice CO homologous gene Heading date1 (Hd1. Tissue-specific expression showed that 42 GhCOL genes may function as tissue-specific regulators in different cells or organs. We cloned and sequenced the 14 GhCOL genes in Group I related to flowering induction to study their diurnal expression pattern, and found that their expression showed distinct circadian regulation. Most of them peaked at dawn and decreased rapidly to their minima at dusk, then started to accumulate until following dawn under long- or short-day conditions. Transgenic study in the Arabidopsis co-2 mutant demonstrated that GhCOL1-A and GhCOL1-D fully rescued the late-flowering phenotype, whereas GhCOL3-A, GhCOL3-D, GhCOL7-A, and GhCOL7-D partially rescued the late-flowering phenotype, and the other five homoeologous pairs in Group I did not promote flowering. These results indicate that GhCOL1-A and GhCOL1-D were potential flowering inducers, and are candidate genes for research in flowering regulation in cotton.

  2. SELETIVIDADE DE INSETICIDAS AO COMPLEXO DE INIMIGOS NATURAIS NA CULTURA DO ALGODÃO (Gossypium hirsutum L. SELECTIVITY OF INSECTICIDES ON THE COMPLEX OF NATURAL ENEMIES IN COTTON CROP (Gossypium hirsutum L.

    Directory of Open Access Journals (Sweden)

    Fábio Shigeo Takatsuka

    2007-09-01

    Full Text Available

    Avaliou-se a seletividade de inseticidas sobre o complexo de inimigos naturais na cultura do algodão (Gossypium hirsutum L., no município de Goiânia, GO. Utilizou-se a cultivar Deltapine e o delineamento experimental em blocos ao acaso, com sete tratamentos e quatro repetições. Os tratamentos foram: testemunha, thiamethoxam (300 g.ha-1, lufenuron (300 mL.ha-1, betacyflutrin (800 mL.ha-1, imidacloprid (70 g.ha-1, diflubenzuron (6,0 g.ha-1, endosulfan (1500 mL.ha-1, em suas apresentações comerciais. A pulverização dos inseticidas foi efetuada aos 45 dias após a emergência das plantas. Além da avaliação prévia, foram efetuadas avaliações aos três e sete dias após a aplicação dos inseticidas. As amostragens foram realizadas através do método de batida de pano, com duas batidas ao acaso por parcela, identificando-se e contando-se, o número de inimigos naturais presentes. Três dias após a aplicação dos tratamentos, os inseticidas thiamethoxam (300 g.ha-1, lufenuron (300 mL.ha-1 e diflubenzuron (60 g.ha-1, considerando os produtos comerciais, não apresentaram efeito de choque sobre o complexo de inimigos naturais presentes na cultura do algodoeiro. Entretanto, aos sete dias após a aplicação, apenas o tratamento com lufenuron manteve a seletividade.a esses artrópodes predadores.

    PALAVRAS-CHAVE: Inseticida; controle biológico; Gossypium.

  3. Defoliation effects on enzyme activities of the ectomycorrhizal fungus Suillus granulatus in a Pinus contorta (lodgepole pine) stand in Yellowstone National Park.

    Science.gov (United States)

    Cullings, Ken; Ishkhanova, Galina; Henson, Joan

    2008-11-01

    Ectomycorrhizal (EM) basidiomycete fungi are obligate mutualists of pines and hardwoods that receive fixed C from the host tree. Though they often share most recent common ancestors with wood-rotting fungi, it is unclear to what extent EM fungi retain the ability to express enzymes that break down woody substrates. In this study, we tested the hypothesis that the dominant EM fungus in a pure pine system retains the ability to produce enzymes that break down woody substrates in a natural setting, and that this ability is inducible by reduction of host photosynthetic potential via partial defoliation. To achieve this, pines in replicate blocks were defoliated 50% by needle removal, and enzyme activities were measured in individual EM root tips that had been treated with antibiotics to prevent possible bacterial activity. Results indicate that the dominant EM fungal species (Suillus granulatus) expressed all enzymes tested (endocellulase D: -glucosidase, laccase, manganese peroxidase, lignin peroxidase, phosphatase and protease), and that activities of these enzymes increased significantly (P pine) has the potential to play a significant role in C, N and P cycling in this forested ecosystem. Therefore, many above-ground factors that reduce photosynthetic potential or divert fixed C from roots may have wide-reaching ecosystem effects.

  4. Effect of ecological management of weed control on economical income, yield and yield components of cotton (Gossypium hirsutum L.

    Directory of Open Access Journals (Sweden)

    A. Zare Feizabadi

    2016-04-01

    Full Text Available In order to compare of ecological management of weed control on economical income, yield and yield components of cotton (Gossypium hirsutum L., a Randomized Complete Block design with 12 treatments and four replications was conducted in Mahvelat of Khorasan Razavi province, Iran. Treatments consisted of weeding, harrowing, burning, two times weeding, weeding + harrowing, weeding + burning, harrowing + harrowing, harrowing + weeding, harrowing + burning, weeding+ harrowing+ burning, weed free and weedy as a check treatment. Investigated traits were plant height, number of boll in plant, 20 boll weight, 20 boll cotton lint weight, cotton lint yield per plant, cotton yield, number and biomass of weeds, outcome, net and gross income. The result showed that treatments had significant effect (p

  5. Differential Cotton leaf crumple virus-VIGS-mediated gene silencing and viral genome localization in different Gossypium hirsutum genetic backgrounds

    KAUST Repository

    Idris, Ali

    2010-12-01

    A Cotton leaf crumple virus (CLCrV)-based gene silencing vector containing a fragment of the Gossypium hirsutum Magnesium chelatase subunit I was used to establish endogenous gene silencing in cotton of varied genetic backgrounds. Biolistic inoculation resulted in systemic and persistent photo-bleaching of the leaves and bolls of the seven cultivars tested, however, the intensity of silencing was variable. CLCrV-VIGS-mediated expression of green fluorescent protein was used to monitor the in planta distribution of the vector, indicating successful phloem invasion in all cultivars tested. Acala SJ-1, one of the cotton cultivars, was identified as a particularly optimal candidate for CLCrV-VIGS-based cotton reverse-genetics. © 2010 Elsevier Ltd.

  6. Transcriptome Analysis of Cotton (Gossypium hirsutum L.) Genotypes That Are Susceptible, Resistant, and Hypersensitive to Reniform Nematode (Rotylenchulus reniformis).

    Science.gov (United States)

    Li, Ruijuan; Rashotte, Aaron M; Singh, Narendra K; Lawrence, Kathy S; Weaver, David B; Locy, Robert D

    2015-01-01

    Reniform nematode is a semi-endoparasitic nematode species causing significant yield loss in numerous crops, including cotton (Gossypium hirsutum L.). An RNA-sequencing analysis was conducted to measure transcript abundance in reniform nematode susceptible (DP90 & SG747), resistant (BARBREN-713), and hypersensitive (LONREN-1) genotypes of cotton (Gossypium hirsutum L.) with and without reniform nematode infestation. Over 90 million trimmed high quality reads were assembled into 84,711 and 80, 353 transcripts using the G. arboreum and the G. raimondii genomes as references. Many transcripts were significantly differentially expressed between the three different genotypes both prior to and during nematode pathogenesis, including transcripts corresponding to the gene ontology categories of cell wall, hormone metabolism and signaling, redox reactions, secondary metabolism, transcriptional regulation, stress responses, and signaling. Further analysis revealed that a number of these differentially expressed transcripts mapped to the G. raimondii and/or the G. arboreum genomes within 1 megabase of quantitative trait loci that had previously been linked to reniform nematode resistance. Several resistance genes encoding proteins known to be strongly linked to pathogen perception and resistance, including LRR-like and NBS-LRR domain-containing proteins, were among the differentially expressed transcripts mapping near these quantitative trait loci. Further investigation is required to confirm a role for these transcripts in reniform nematode susceptibility, hypersensitivity, and/or resistance. This study presents the first systemic investigation of reniform nematode resistance-associated genes using different genotypes of cotton. The candidate reniform nematode resistance-associated genes identified in this study can serve as the basis for further functional analysis and aid in further development of reniform a nematode resistant cotton germplasm.

  7. A melting pot of Old World begomoviruses and their satellites infecting a collection of Gossypium species in Pakistan.

    Directory of Open Access Journals (Sweden)

    Muhammad Shah Nawaz-ul-Rehman

    Full Text Available CLCuD in southern Asia is caused by a complex of multiple begomoviruses (whitefly transmitted, single-stranded [ss]DNA viruses in association with a specific ssDNA satellite; Cotton leaf curl Multan betasatellite (CLCuMuB. A further single ssDNA molecule, for which the collective name alphasatellites has been proposed, is also frequently associated with begomovirus-betasatellite complexes. Multan is in the center of the cotton growing area of Pakistan and has seen some of the worst problems caused by CLCuD. An exhaustive analysis of the diversity of begomoviruses and their satellites occurring in 15 Gossypium species (including G. hirsutum, the mainstay of Pakistan's cotton production that are maintained in an orchard in the vicinity of Multan has been conducted using φ29 DNA polymerase-mediated rolling-circle amplification, cloning and sequence analysis. The non-cultivated Gossypium species, including non-symptomatic plants, were found to harbor a much greater diversity of begomoviruses and satellites than found in the cultivated G. hirsutum. Furthermore an African cassava mosaic virus (a virus previously only identified in Africa DNA-A component and a Jatropha curcas mosaic virus (a virus occurring only in southern India DNA-B component were identified. Consistent with earlier studies of cotton in southern Asia, only a single species of betasatellite, CLCuMuB, was identified. The diversity of alphasatellites was much greater, with many previously unknown species, in the non-cultivated cotton species than in G. hirsutum. Inoculation of newly identified components showed them to be competent for symptomatic infection of Nicotiana benthamiana plants. The significance of the findings with respect to our understanding of the role of host selection in virus diversity in crops and the geographical spread of viruses by human activity are discussed.

  8. A melting pot of Old World begomoviruses and their satellites infecting a collection of Gossypium species in Pakistan.

    Science.gov (United States)

    Nawaz-ul-Rehman, Muhammad Shah; Briddon, Rob W; Fauquet, Claude M

    2012-01-01

    CLCuD in southern Asia is caused by a complex of multiple begomoviruses (whitefly transmitted, single-stranded [ss]DNA viruses) in association with a specific ssDNA satellite; Cotton leaf curl Multan betasatellite (CLCuMuB). A further single ssDNA molecule, for which the collective name alphasatellites has been proposed, is also frequently associated with begomovirus-betasatellite complexes. Multan is in the center of the cotton growing area of Pakistan and has seen some of the worst problems caused by CLCuD. An exhaustive analysis of the diversity of begomoviruses and their satellites occurring in 15 Gossypium species (including G. hirsutum, the mainstay of Pakistan's cotton production) that are maintained in an orchard in the vicinity of Multan has been conducted using φ29 DNA polymerase-mediated rolling-circle amplification, cloning and sequence analysis. The non-cultivated Gossypium species, including non-symptomatic plants, were found to harbor a much greater diversity of begomoviruses and satellites than found in the cultivated G. hirsutum. Furthermore an African cassava mosaic virus (a virus previously only identified in Africa) DNA-A component and a Jatropha curcas mosaic virus (a virus occurring only in southern India) DNA-B component were identified. Consistent with earlier studies of cotton in southern Asia, only a single species of betasatellite, CLCuMuB, was identified. The diversity of alphasatellites was much greater, with many previously unknown species, in the non-cultivated cotton species than in G. hirsutum. Inoculation of newly identified components showed them to be competent for symptomatic infection of Nicotiana benthamiana plants. The significance of the findings with respect to our understanding of the role of host selection in virus diversity in crops and the geographical spread of viruses by human activity are discussed.

  9. Generation, annotation and analysis of first large-scale expressed sequence tags from developing fiber of Gossypium barbadense L.

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    Daojun Yuan

    Full Text Available BACKGROUND: Cotton fiber is the world's leading natural fiber used in the manufacture of textiles. Gossypium is also the model plant in the study of polyploidization, evolution, cell elongation, cell wall development, and cellulose biosynthesis. G. barbadense L. is an ideal candidate for providing new genetic variations useful to improve fiber quality for its superior properties. However, little is known about fiber development mechanisms of G. barbadense and only a few molecular resources are available in GenBank. METHODOLOGY AND PRINCIPAL FINDINGS: In total, 10,979 high-quality expressed sequence tags (ESTs were generated from a normalized fiber cDNA library of G. barbadense. The ESTs were clustered and assembled into 5852 unigenes, consisting of 1492 contigs and 4360 singletons. The blastx result showed 2165 unigenes with significant similarity to known genes and 2687 unigenes with significant similarity to genes of predicted proteins. Functional classification revealed that unigenes were abundant in the functions of binding, catalytic activity, and metabolic pathways of carbohydrate, amino acid, energy, and lipids. The function motif/domain-related cytoskeleton and redox homeostasis were enriched. Among the 5852 unigenes, 282 and 736 unigenes were identified as potential cell wall biosynthesis and transcription factors, respectively. Furthermore, the relationships among cotton species or between cotton and other model plant systems were analyzed. Some putative species-specific unigenes of G. barbadense were highlighted. CONCLUSIONS/SIGNIFICANCE: The ESTs generated in this study are from the first large-scale EST project for G. barbadense and significantly enhance the number of G. barbadense ESTs in public databases. This knowledge will contribute to cotton improvements by studying fiber development mechanisms of G. barbadense, establishing a breeding program using marker-assisted selection, and discovering candidate genes related to

  10. Proceedings, forest defoliator--host interactions: A comparison between gypsy moth and spruce budworms; 1983 April 5-7; New Haven, CT: Summary of Life History and Hosts of the Spruce Budworms

    Science.gov (United States)

    Robert L. Talerico; Michael Montgomery

    1983-01-01

    The Canada/U.S. Spruce Budworms Program in cooperation with the Center for Biological Control of Northeastern Forest Insects and Diseases of the Northeastern Forest Experiment Station co-sponsored this Forest Defoliator-Host Interaction Workshop.This invitational workshop was limited to investigators of the spruce bud worms and gypsy moth in the Forest Service,...

  11. Effects of rotation of cotton (Gossypium hirsutum L.) and soybean [Glycine max (L.) Merr.] crops on soil fertility in Elizabeth, Mississippi, USA

    OpenAIRE

    H.A., Reddy, K. and Pettigrew, W.T.

    2018-01-01

    The effects of cotton (Gossypium hirsutum L.): soybean [Glycine max (L.) Merr.] rotation on the soil fertility levels are limited. An irrigated soybean: cotton rotation experiment was conducted from 2012 through 2015 near Elizabeth, Mississippi, USA. The crop rotation sequences were included continuous cotton (CCCC), continuous soybean (SSSS), cotton-soybean-cotton-soybean (CSCS), cotton-soybean-soybean-cotton (CSSC), soybean-cotton-cotton-soybean (SCCS), soybean-cotton-soybean-cotton (SCSC)....

  12. Genome-Wide Identification and Expression Analysis of the Biotin Carboxyl Carrier Subunits of Heteromeric Acetyl-CoA Carboxylase in Gossypium

    Science.gov (United States)

    Cui, Yupeng; Zhao, Yanpeng; Wang, Yumei; Liu, Zhengjie; Ijaz, Babar; Huang, Yi; Hua, Jinping

    2017-01-01

    Acetyl-CoA carboxylase is an important enzyme, which catalyzes acetyl-CoA’s carboxylation to produce malonyl-CoA and to serve as a committed step for de novo fatty acid biosynthesis in plastids. In this study, 24 putative cotton BCCP genes were identified based on the lately published genome data in Gossypium. Among them, 4, 4, 8, and 8 BCCP homologs were identified in Gossypium raimondii, G. arboreum, G. hirsutum, and G. barbadense, respectively. These genes were divided into two classes based on a phylogenetic analysis. In each class, these homologs were relatively conserved in gene structure and motifs. The chromosomal distribution pattern revealed that all the BCCP genes were distributed equally on corresponding chromosomes or scaffold in the four cotton species. Segmental duplication was a predominant duplication event in both of G. hirsutum and G. barbadense. The analysis of the expression profile showed that 8 GhBCCP genes expressed in all the tested tissues with changed expression levels, and GhBCCP genes belonging to class II were predominantly expressed in developing ovules. Meanwhile, the expression analysis for the 16 cotton BCCP genes from G. raimondii, G. arboreum and G. hirsutum showed that they were induced or suppressed by cold or salt stress, and their expression patterns varied among different tissues. These findings will help to determine the functional and evolutionary characteristics of the BCCP genes in Gossypium species. PMID:28507552

  13. Genome-Wide Identification and Expression Analysis of the Biotin Carboxyl Carrier Subunits of Heteromeric Acetyl-CoA Carboxylase in Gossypium

    Directory of Open Access Journals (Sweden)

    Jinping Hua

    2017-05-01

    Full Text Available Acetyl-CoA carboxylase is an important enzyme, which catalyzes acetyl-CoA’s carboxylation to produce malonyl-CoA and to serve as a committed step for de novo fatty acid biosynthesis in plastids. In this study, 24 putative cotton BCCP genes were identified based on the lately published genome data in Gossypium. Among them, 4, 4, 8, and 8 BCCP homologs were identified in Gossypium raimondii, G. arboreum, G. hirsutum, and G. barbadense, respectively. These genes were divided into two classes based on a phylogenetic analysis. In each class, these homologs were relatively conserved in gene structure and motifs. The chromosomal distribution pattern revealed that all the BCCP genes were distributed equally on corresponding chromosomes or scaffold in the four cotton species. Segmental duplication was a predominant duplication event in both of G. hirsutum and G. barbadense. The analysis of the expression profile showed that 8 GhBCCP genes expressed in all the tested tissues with changed expression levels, and GhBCCP genes belonging to class II were predominantly expressed in developing ovules. Meanwhile, the expression analysis for the 16 cotton BCCP genes from G. raimondii, G. arboreum and G. hirsutum showed that they were induced or suppressed by cold or salt stress, and their expression patterns varied among different tissues. These findings will help to determine the functional and evolutionary characteristics of the BCCP genes in Gossypium species.

  14. Genome-wide identification and comparative analysis of squamosa-promoter binding proteins (sbp) transcription factor family in gossypium raimondii and arabidopsis thaliana

    International Nuclear Information System (INIS)

    Ali, M.A.; Alia, K.B.; Atif, R.M.; Rasulj, I.; Nadeem, H.U.; Shahid, A.; Azeem, F

    2017-01-01

    SQUAMOSA-Promoter Binding Proteins (SBP) are class of transcription factors that play vital role in regulation of plant tissue growth and development. The genes encoding these proteins have not yet been identified in diploid cotton. Thus here, a comprehensive genome wide analysis of SBP genes/proteins was carried out to identify the genes encoding SBP proteins in Gossypium raimondii and Arabidopsis thaliana. We identified 17 SBP genes from Arabidopsis thaliana genome and 30 SBP genes from Gossypium raimondii. Chromosome localization studies revealed the uneven distribution of SBP encoding genes both in the genomes of A. thaliana and G. raimondii. In cotton, five SBP genes were located on chromosome no. 2, while no gene was found on chromosome 9. In A. thaliana, maximum seven SBP genes were identified on chromosome 9, while chromosome 4 did not have any SBP gene. Thus, the SBP gene family might have expanded as a result of segmental as well as tandem duplications in these species. The comparative phylogenetic analysis of Arabidopsis and cotton SBPs revealed the presence of eight groups. The gene structure analysis of SBP encoding genes revealed the presence of one to eleven inrons in both Arabidopsis and G. raimondii. The proteins sharing the same phyletic group mostly demonstrated the similar intron-exon occurrence pattern; and share the common conserved domains. The SBP DNA-binding domain shared 24 absolutely conserved residues in Arabidopsis. The present study can serve as a base for the functional characterization of SBP gene family in Gossypium raimondii. (author)

  15. Measuring Phenological Changes due to Defoliation of the Non-Native Species, Saltcedar (Tamarisk) Following Episodic Foliage Removal by the Beetle Diorhabda elongate and Phenological Impacts on Forage Quality for Insectivorous Birds on the Dolores River

    Science.gov (United States)

    Nagler, P. L.; Dennison, P. E.; Hultine, K. R.; van Riper, C.; Glenn, E. P.

    2008-12-01

    Since its introduction to the western U.S. more than a century ago, tamarisk (Tamarix spp.) has become dominant or sub-dominant over many major arid, and semi-arid river systems and their tributaries. The presence of tamarisk has been cited for reducing water availability for human enterprise and biodiversity, displacing native vegetation and for reducing habitat quality for wildlife. With increasing emphasis by public and private sectors on controlling saltcedar (Tamarix chinensis) in the western US, there will likely be a dramatic change in riparian vegetation composition over the course of the next several decades. The rates at which these changes will occur, and the resultant effects on riparian insects and birds that utilize insects for food, are presently unknown. Effects on riparian vegetation communities, resulting from changes in host plant species composition, will likely include changes in plant biomass, microclimate changes, and plant species diversity. These changes could potentially have a profound impact on migratory and breeding birds within riparian corridors throughout the southwest. Recently, the saltcedar leaf beetle (Diorhabda elongata) was released as a tamarisk biocontrol agent. This beetle has successfully defoliated tamarisk where it has been introduced, but there are currently no comprehensive programs in place for monitoring the rapid spread of Diorhabda, the impact of defoliation on habitat and water resources, or the long-term impact of defoliation on tamarisk. We used higher spatial resolution ASTER data and coarser MODIS data for monitoring defoliation caused by Diorhabda elongata and subsequent changes in evapotranspiration (ET). Widespread tamarisk defoliation was observed in an eastern Utah study area during summers 2007, 2008. We measured stem sap flux, leaf carbon isotope ratios, leaf area, LAI, and vegetation indices from mounted visible and infrared cameras and satellite imagery. The cameras were paired on towers installed 30

  16. Genome-wide cloning, identification, classification and functional analysis of cotton heat shock transcription factors in cotton (Gossypium hirsutum).

    Science.gov (United States)

    Wang, Jun; Sun, Na; Deng, Ting; Zhang, Lida; Zuo, Kaijing

    2014-11-06

    Heat shock transcriptional factors (Hsfs) play important roles in the processes of biotic and abiotic stresses as well as in plant development. Cotton (Gossypium hirsutum, 2n=4x=(AD)2=52) is an important crop for natural fiber production. Due to continuous high temperature and intermittent drought, heat stress is becoming a handicap to improve cotton yield and lint quality. Recently, the related wild diploid species Gossypium raimondii genome (2n=2x=(D5)2=26) has been fully sequenced. In order to analyze the functions of different Hsfs at the genome-wide level, detailed characterization and analysis of the Hsf gene family in G. hirsutum is indispensable. EST assembly and genome-wide analyses were applied to clone and identify heat shock transcription factor (Hsf) genes in Upland cotton (GhHsf). Forty GhHsf genes were cloned, identified and classified into three main classes (A, B and C) according to the characteristics of their domains. Analysis of gene duplications showed that GhHsfs have occurred more frequently than reported in plant genomes such as Arabidopsis and Populus. Quantitative real-time PCR (qRT-PCR) showed that all GhHsf transcripts are expressed in most cotton plant tissues including roots, stems, leaves and developing fibers, and abundantly in developing ovules. Three expression patterns were confirmed in GhHsfs when cotton plants were exposed to high temperature for 1 h. GhHsf39 exhibited the most immediate response to heat shock. Comparative analysis of Hsfs expression differences between the wild-type and fiberless mutant suggested that Hsfs are involved in fiber development. Comparative genome analysis showed that Upland cotton D-subgenome contains 40 Hsf members, and that the whole genome of Upland cotton contains more than 80 Hsf genes due to genome duplication. The expression patterns in different tissues in response to heat shock showed that GhHsfs are important for heat stress as well as fiber development. These results provide an improved

  17. Overexpression of GhDof1 improved salt and cold tolerance and seed oil content in Gossypium hirsutum.

    Science.gov (United States)

    Su, Ying; Liang, Wei; Liu, Zhengjie; Wang, Yumei; Zhao, Yanpeng; Ijaz, Babar; Hua, Jinping

    2017-11-01

    A homologous GhDof1, which belongs to a large family of plant-specific transcription factor DOF, was isolated from Upland cotton (Gossypium hirsutum L.). GhDof1 protein was located in the nucleus of onion epidermal cells, the core domain of transcriptional activity existed in the C-terminal, and the activity elements of GhDof1 promoter existed in the regions of -645∼ -469bp and -286∼ -132bp of transcriptional start codon. GhDof1 constitutively expressed in leaves, roots and stems, accumulated highest in leaves. The salinity and cold treatments induced GhDof1 transcript accumulation. The GhDof1-overexpressed cotton showed significantly higher salt and cold tolerance over the wild-type plants. Under salt stress, the root growth of overexpressed GhDof1 lines was promoted. The expression levels of stress-responsive genes, GhP5CS, GhSOD and GhMYB, were differently up-regulated in transgenic lines. Oil contents increased in some transgenic plants, and protein contents reduced compared with transformed receptor. These results suggested that GhDof1 was a functional transcription factor for improving the abiotic tolerance and seed oil content in Upland cotton. Copyright © 2017 Elsevier GmbH. All rights reserved.

  18. Plant tissue culture independent Agrobacterium tumefaciens mediated In-planta transformation strategy for upland cotton (Gossypium hirsutum

    Directory of Open Access Journals (Sweden)

    Bipinchandra B. Kalbande

    2016-06-01

    Full Text Available A new method of transgenic development called “In-planta” transformation method, where Agrobacterium is used to infect the plantlets but the steps of in vitro regeneration of plants is totally avoided. In this study, we have reported a simple In-planta method for efficient transformation of diploid cotton Gossypium hirsutum cv LRK-516 Anjali using Agrobacterium tumefaciens EHA-105 harbouring recombinant binary vector plasmid pBinAR with Arabidopsis At-NPR1 gene. Four day old plantlets were used for transformation. A vertical cut was made at the junction of cotyledonary leaves, moderately bisecting the shoot tip and exposing meristem cells at apical meristem. This site was infected with Agrobacterium inoculum. The transgenic events obtained were tested positive for the presence of At-NPR1 gene with promoter nptII gene. They are also tested negative for vector backbone integration and Agrobacterium contamination in T0 events. With this method a transformation frequency of 6.89% was reported for the cv LRK-516.

  19. Genome-Wide Identification of R2R3-MYB Genes and Expression Analyses During Abiotic Stress in Gossypium raimondii

    Science.gov (United States)

    He, Qiuling; Jones, Don C.; Li, Wei; Xie, Fuliang; Ma, Jun; Sun, Runrun; Wang, Qinglian; Zhu, Shuijin; Zhang, Baohong

    2016-01-01

    The R2R3-MYB is one of the largest families of transcription factors, which have been implicated in multiple biological processes. There is great diversity in the number of R2R3-MYB genes in different plants. However, there is no report on genome-wide characterization of this gene family in cotton. In the present study, a total of 205 putative R2R3-MYB genes were identified in cotton D genome (Gossypium raimondii), that are much larger than that found in other cash crops with fully sequenced genomes. These GrMYBs were classified into 13 groups with the R2R3-MYB genes from Arabidopsis and rice. The amino acid motifs and phylogenetic tree were predicted and analyzed. The sequences of GrMYBs were distributed across 13 chromosomes at various densities. The results showed that the expansion of the G. Raimondii R2R3-MYB family was mainly attributable to whole genome duplication and segmental duplication. Moreover, the expression pattern of 52 selected GrMYBs and 46 GaMYBs were tested in roots and leaves under different abiotic stress conditions. The results revealed that the MYB genes in cotton were differentially expressed under salt and drought stress treatment. Our results will be useful for determining the precise role of the MYB genes during stress responses with crop improvement. PMID:27009386

  20. Silicon (Si) alleviates cotton (Gossypium hirsutum L.) from zinc (Zn) toxicity stress by limiting Zn uptake and oxidative damage.

    Science.gov (United States)

    Anwaar, Shad Ali; Ali, Shafaqat; Ali, Skhawat; Ishaque, Wajid; Farid, Mujahid; Farooq, Muhammad Ahsan; Najeeb, Ullah; Abbas, Farhat; Sharif, Muhammad

    2015-03-01

    Silicon (Si) is as an important fertilizer element, which has been found effective in enhancing plant tolerance to variety of biotic and a-biotic stresses. This study investigates the Si potential to alleviate zinc (Zn) toxicity stress in cotton (Gossypium hirsutum L.). Cotton plants were grown in hydroponics and exposed to different Zn concentration, 0, 25, and 50 μM, alone and/or in combination with 1 mM Si. Incremental Zn concentration in growth media instigated the cellular oxidative damage that was evident from elevated levels of hydrogen peroxide (H2O2), electrolyte leakage, and malondialdehyde (MDA) and consequently inhibited cotton growth, biomass, chlorophyll pigments, and photosynthetic process. Application of Si significantly suppressed Zn accumulation in various plant parts, i.e., roots, stems, and leaves and thus promoted biomass, photosynthetic, growth parameters, and antioxidant enzymes activity of Zn-stressed as well unstressed plants. In addition, Si reduced the MDA and H2O2 production and electrolyte leakage suggesting its role in protecting cotton plants from Zn toxicity-induced oxidative damage. Thus, the study indicated that exogenous Si application could improve growth and development of cotton crop experiencing Zn toxicity stress by limiting Zn bioavailability and oxidative damage.

  1. Genome wide identification of cotton (Gossypium hirsutum)-encoded microRNA targets against Cotton leaf curl Burewala virus.

    Science.gov (United States)

    Shweta; Akhter, Yusuf; Khan, Jawaid Ahmad

    2018-01-05

    Cotton leaf curl Burewala virus (CLCuBV, genus Begomovirus) causes devastating cotton leaf curl disease. Among various known virus controlling strategies, RNAi-mediated one has shown potential to protect host crop plants. Micro(mi) RNAs, are the endogenous small RNAs and play a key role in plant development and stress resistance. In the present study we have identified cotton (Gossypium hirsutum)-encoded miRNAs targeting the CLCuBV. Based on threshold free energy and maximum complementarity scores of host miRNA-viral mRNA target pairs, a number of potential miRNAs were annotated. Among them, ghr-miR168 was selected as the most potent candidate, capable of targeting several vital genes namely C1, C3, C4, V1 and V2 of CLCuBV genome. In addition, ghr-miR395a and ghr-miR395d were observed to target the overlapping transcripts of C1 and C4 genes. We have verified the efficacy of these miRNA targets against CLCuBV following suppression of RNAi-mediated virus control through translational inhibition or cleavage of viral mRNA. Copyright © 2017 Elsevier B.V. All rights reserved.

  2. Genetic regulation of salt stress tolerance revealed by RNA-Seq in cotton diploid wild species, Gossypium davidsonii.

    Science.gov (United States)

    Zhang, Feng; Zhu, Guozhong; Du, Lei; Shang, Xiaoguang; Cheng, Chaoze; Yang, Bing; Hu, Yan; Cai, Caiping; Guo, Wangzhen

    2016-02-03

    Cotton is an economically important crop throughout the world, and is a pioneer crop in salt stress tolerance research. Investigation of the genetic regulation of salinity tolerance will provide information for salt stress-resistant breeding. Here, we employed next-generation RNA-Seq technology to elucidate the salt-tolerant mechanisms in cotton using the diploid cotton species Gossypium davidsonii which has superior stress tolerance. A total of 4744 and 5337 differentially expressed genes (DEGs) were found to be involved in salt stress tolerance in roots and leaves, respectively. Gene function annotation elucidated salt overly sensitive (SOS) and reactive oxygen species (ROS) signaling pathways. Furthermore, we found that photosynthesis pathways and metabolism play important roles in ion homeostasis and oxidation balance. Moreover, our studies revealed that alternative splicing also contributes to salt-stress responses at the posttranscriptional level, implying its functional role in response to salinity stress. This study not only provides a valuable resource for understanding the genetic control of salt stress in cotton, but also lays a substantial foundation for the genetic improvement of crop resistance to salt stress.

  3. Comprehensive Analysis of the COBRA-Like (COBL) Gene Family in Gossypium Identifies Two COBLs Potentially Associated with Fiber Quality

    Science.gov (United States)

    Niu, Erli; Shang, Xiaoguang; Cheng, Chaoze; Bao, Jianghao; Zeng, Yanda; Cai, Caiping; Du, Xiongming; Guo, Wangzhen

    2015-01-01

    COBRA-Like (COBL) genes, which encode a plant-specific glycosylphosphatidylinositol (GPI) anchored protein, have been proven to be key regulators in the orientation of cell expansion and cellulose crystallinity status. Genome-wide analysis has been performed in A. thaliana, O. sativa, Z. mays and S. lycopersicum, but little in Gossypium. Here we identified 19, 18 and 33 candidate COBL genes from three sequenced cotton species, diploid cotton G. raimondii, G. arboreum and tetraploid cotton G. hirsutum acc. TM-1, respectively. These COBL members were anchored onto 10 chromosomes in G. raimondii and could be divided into two subgroups. Expression patterns of COBL genes showed highly developmental and spatial regulation in G. hirsutum acc. TM-1. Of them, GhCOBL9 and GhCOBL13 were preferentially expressed at the secondary cell wall stage of fiber development and had significantly co-upregulated expression with cellulose synthase genes GhCESA4, GhCESA7 and GhCESA8. Besides, GhCOBL9 Dt and GhCOBL13 Dt were co-localized with previously reported cotton fiber quality quantitative trait loci (QTLs) and the favorable allele types of GhCOBL9 Dt had significantly positive correlations with fiber quality traits, indicating that these two genes might play an important role in fiber development. PMID:26710066

  4. Potassium improves photosynthetic tolerance to and recovery from episodic drought stress in functional leaves of cotton (Gossypium hirsutum L.).

    Science.gov (United States)

    Zahoor, Rizwan; Zhao, Wenqing; Dong, Haoran; Snider, John L; Abid, Muhammad; Iqbal, Babar; Zhou, Zhiguo

    2017-10-01

    To investigate whether potassium (K) application enhances the potential of cotton (Gossypium hirsutum L.) plants to maintain physiological functions during drought and recovery, low K-sensitive (Siza 3) and -tolerant (Simian 3) cotton cultivars were exposed to three K rates (0, 150, and 300 K 2 O kg ha -1 ) and either well-watered conditions or severe drought stress followed by a recovery period. Under drought stress, cotton plants showed a substantial decline in leaf water potential, stomatal conductance, photosynthetic rate, and the maximum and actual quantum yield of PSII, resulting in greater non-photochemical quenching and lipid peroxidation as compared to well-watered plants. However, plants under K application not only showed less of a decline in these traits but also displayed greater potential to recover after rewatering as compared to the plants without K application. Plants receiving K application showed lower lipid peroxidation, higher antioxidant enzyme activities, and increased proline accumulation as compared to plants without K application. Significant relationships between rates of photosynthetic recovery and K application were observed. The cultivar Siza 3 exhibited a more positive response to K application than Simian 3. The results suggest that K application enhances the cotton plant's potential to maintain functionality under drought and facilitates recovery after rewatering. Copyright © 2017 Elsevier Masson SAS. All rights reserved.

  5. Role of xyloglucan in cotton (Gossypium hirsutum L.) fiber elongation of the short fiber mutant Ligon lintless-2 (Li2).

    Science.gov (United States)

    Naoumkina, Marina; Hinchliffe, Doug J; Fang, David D; Florane, Christopher B; Thyssen, Gregory N

    2017-08-30

    Xyloglucan is a matrix polysaccharide found in the cell walls of all land plants. In growing cells, xyloglucan is thought to connect cellulose microfibrils and regulate their separation during wall extension. Ligon lintless-2 (Li 2 ) is a monogenic dominant cotton fiber mutation that causes extreme reduction in lint fiber length with no pleiotropic effects on vegetative growth. Li 2 represents an excellent model system to study fiber elongation. To understand the role of xyloglucan in cotton fiber elongation we used the short fiber mutant Li 2 and its near isogenic wild type for analysis of xyloglucan content and expression of xyloglucan-related genes in developing fibers. Accumulation of xyloglucan was significantly higher in Li 2 developing fibers than in wild type. Genes encoding enzymes for nine family members of xyloglucan biosynthesis were identified in the draft Gossypium hirsutum genome. RNAseq analysis revealed that most differentially expressed xyloglucan-related genes were down-regulated in Li 2 fiber cells. RT-qPCR analysis revealed that the peak of expression for the majority of xyloglucan-related genes in wild type developing fibers was 5-16days post anthesis (DPA) compared to 1-3 DPA in Li 2 fibers. Thus, our results suggest that early activation of xyloglucan-related genes and down regulation of xyloglucan degradation genes during the elongation phase lead to elevated accumulation of xyloglucan that restricts elongation of fiber cells in Li 2 . Copyright © 2017. Published by Elsevier B.V.

  6. Characterization and functional analysis of GhRDR6, a novel RDR6 gene from cotton (Gossypium hirsutum L.).

    Science.gov (United States)

    Wang, Mian; Li, Shanwei; Yang, Haifang; Gao, Zheng; Wu, Changai; Guo, Xingqi

    2012-04-01

    RDR6 (RNA-dependent RNA polymerase 6) is not only involved in virus resistance but also plays an important role in natural plant development. In the present study, a novel RDR gene, named GhRDR6 (Gossypium hirsutum RDR6), was isolated from cotton (G. hirsutum L.). Alignment and evolutionary relationship analyses showed that GhRDR6 was more closely related to RDR6 than to other RDRs. Expression analysis indicated that this single-copy gene is constitutively expressed in the roots, stems and leaves. Semi-quantitative RT-PCR (reverse transcription-PCR) showed that GhRDR6 was up-regulated by the application of various phytohormones, including MeJA [methyl JA (jasmonate)], ABA (abscisic acid), JA, α-naphthylacetic acid, gibberellins and ET (ethylene). In addition, GhRDR6 expression increased in response to wounding, cold (4°C) and NaCl treatments, but not by drought. Furthermore, overexpression of GhRDR6 in transgenic Nicotiana benthamiana plants resulted in root lengths longer than the wide-type during the seeding stage. Interestingly, the GhRDR6-overexpressing plants displayed reduced tolerance to oxidative damage, resulting in reduced ABA-sensitivity, but they tolerated freezing. Moreover, resistance to potato virus Y was enhanced in transgenic N. benthamiana plants. These results suggest that GhRDR6 may play an important role in plant defence responses and a pivotal role in plant development.

  7. Characterization of a novel annexin gene from cotton (Gossypium hirsutum cv CRI 35) and antioxidative role of its recombinant protein.

    Science.gov (United States)

    Zhou, Lu; Duan, Jin; Wang, Xiao-Ming; Zhang, Heng-Mu; Duan, Ming-Xing; Liu, Jin-Yuan

    2011-05-01

    Plant annexins represent a multigene family involved in cellular elongation and development. A cDNA encoding a novel annexin was isolated from a cotton (Gossypium hirsutum) fiber cDNA library and designated GhAnx1. This gene encodes a 316 amino acid protein with a theoretical molecular mass of 36.06 kDa and a theoretical pI of 6.19. At the amino acid level, it shares high sequence similarity and has evolutionary relationships with annexins from higher plants. The purified recombinant protein expressed in Escherichia coli was used to investigate its physicochemical properties. Circular dichroism spectrum analyses showed a positive peak rising to the maximum at 196 nm and a broad negative band rounding 215 nm, suggesting that the GhAnx1 protein was prominently α-helical. The fluorescence measurements indicated that it could bind to Ca(2+) in vitro. These results demonstrated that GhAnx1 was a typical annexin protein in cotton. A bioassay experiment was conducted to analyze its potential function and showed that E. coli cells expressing GhAnx1 were protected from tert-butyl hydroperoxide (tBH) stress, suggesting that it had a potential antioxidative role. Northern blot analyses revealed that GhAnx1 was highly expressed in fibers, especially during the elongation stage, suggesting that it might be important for fiber elongation. © 2011 Institute of Botany, Chinese Academy of Sciences.

  8. Functional characterization of GhSOC1 and GhMADS42 homologs from upland cotton (Gossypium hirsutum L.).

    Science.gov (United States)

    Zhang, Xiaohong; Wei, Jianghui; Fan, Shuli; Song, Meizhen; Pang, Chaoyou; Wei, Hengling; Wang, Chengshe; Yu, Shuxun

    2016-01-01

    In Arabidopsis flowering pathway, MADS-box genes encode transcription factors, with their structures and functions highly conserved in many species. In our study, two MADS-box genes GhSOC1 and GhMADS42 (Gossypium hirsutum L.) were cloned from upland cotton CCRI36 and transformed into Arabidopsis. GhSOC1 was additionally transformed into upland cotton. Comparative analysis demonstrated sequence conservation between GhSOC1 and GhMADS42 and genes of other plant species. Tissue-specific expression analysis of GhSOC1 and GhMADS42 revealed spatiotemporal expression patterns involving high transcript levels in leaves, shoot apical buds, and flowers. In addition, overexpression of both GhSOC1 and GhMADS42 in Arabidopsis accelerated flowering, with GhMADS42 transgenic plants showing abnormal floral organ phenotypes. Overexpression of GhSOC1 in upland cotton also produced variations in floral organs. Furthermore, chromatin immunoprecipitation assay demonstrated that GhSOC1 could regulate GhMADS41 and GhMADS42, but not FLOWERING LOCUS T, by directly binding to the genes promoter. Finally, yeast two-hybrid and bimolecular fluorescence complementation approaches were undertaken to better understand the interaction of GhSOC1 and other MADS-box factors. These experiments showed that GhSOC1 can interact with APETALA1/FRUITFULL-like proteins in cotton. Copyright © 2015 Elsevier Ireland Ltd. All rights reserved.

  9. Molecular cloning and characterization of GhNPR1, a gene implicated in pathogen responses from cotton (Gossypium hirsutum L.).

    Science.gov (United States)

    Zhang, Ying; Wang, Xia; Cheng, Cheng; Gao, Qiuqiang; Liu, Jingyun; Guo, Xingqi

    2008-02-01

    A novel gene, designated as GhNPR1 (Gossypium hirsutum non-expressor of pathogenesis-related genes 1), was isolated from G. hirsutum (cotton) by RT-PCR (reverse transcription-PCR) and RACE (rapid amplification of cDNA ends). The full-length cDNA was 2108 bp long and had an ORF (open reading frame) that putatively encoded a polypeptide of 592 amino acids, with a predicted molecular mass of 66 kDa. Comparison of this protein sequence with that of Arabidopsis thaliana, Brassica juncea and Nicotiana tabacum showed that the amino-acid homology was 52.98, 52.32 and 54.98% respectively. Analysis of the exon-intron structure of the GhNPR1 gene showed that GhNPR1 consisted of four exons and three introns. Southern-blot analysis revealed that the GhNPR1 was a single-copy gene in cotton. Northern-blot analysis indicated that GhNPR1 was constitutively expressed in all tested tissues, including roots, stems and leaves, with the high expression in stems and leaves. In addition, GhNPR1 was also found to be induced by signalling molecules for plant defence responses, such as methyl jasmonate, salicylic acid and ethylene, as well as attack by pathogens, such as Fusarium oxysporum and Xanthomonas campestris. These results suggest that GhNPR1 may play an important role in the response to pathogen infections in cotton plants.

  10. Molecular cloning and characterization of five genes encoding pentatricopeptide repeat proteins from Upland cotton (Gossypium hirsutum L.).

    Science.gov (United States)

    Yang, Luming; Zhu, Huayu; Guo, Wangzhen; Zhang, Tianzhen

    2010-02-01

    The pentatricopeptide repeat (PPR) protein family is one of the largest and most complex families in plants. These proteins contain multiple 35-amino acid repeats that are proposed to form a super helix capable of binding RNA. PPR proteins have been implicated in many crucial functions broadly involving organelle biogenesis and plant development. In this study, we identified many genes encoding PPR protein in Upland cotton through an extensive survey of the database of Gossypium hirsutum. Furthermore, we isolated five full-length cDNA of PPR genes from G. hirsutum 0-613-2R which were named GhPPR1-GhPPR5. Domain analysis revealed that the deduced amino acid sequences of GhPPR1-5 contained from 5 to 10 PPR motifs and those PPR proteins were divided into two different PPR subfamilies. GhPPR1-2 belonged to the PLS subfamily and GhPPR3-5 belonged to the P subfamily. Phylogenetic analysis of the five GhPPR proteins and 18 other plant PPR proteins also revealed that the same subfamily clustered together. All five GhPPR genes were differentially but constitutively expressed in roots, stems, leaves, pollens, and fibers based on the gene expression analysis by real-time quantitative RT-PCR. This study is the first report and analysis of genes encoding PPR proteins in cotton.

  11. Comparison of ionomic and metabolites response under alkali stress in old and young leaves of cotton (Gossypium hirsutum L. seedlings

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    Rui Guo

    2016-11-01

    Full Text Available Soil salinization is an important agriculture-related environmental problem. Alkali stress and salt stress strongly influence the metabolic balance in plants. Salt and alkali stresses exert varied effects on old and young tissues, which display different adaptive strategies. In this study, we used cotton (Gossypium hirsutum L. plants as experimental material to investigate whether alkali stress exerts varied effects on ion balance and metabolism in old and young leaves of cotton plants exposed to alkali stress. Moreover, we compared the functions of young and old leaves in alkali tolerance. Results showed that alkali stress exerted a considerably stronger growth inhibition on old leaves than on young leaves. Under alkali stress, young leaves can maintain low Na and high K contents and retain relatively stable pigment accumulation and tricarboxylic acid cycle (TCA, resulting in greater accumulation of photosynthetic metabolites. In terms of metabolic response, the young and old leaves clearly displayed different mechanisms of osmotic regulation. The amounts of inositol and mannose significantly increased in both old and young leaves of cotton exposed to alkali stress, and the extent of increase was higher in young leaves than in old leaves. In old leaves, synthesis of amino acids, such as GABA, valine, and serine, was dramatically enhanced, and this phenomenon is favorable for osmotic adjustment and membrane stability. Organs at different developmental stages possibly display different mechanisms of metabolic regulation under stress condition. Thus, we propose that future investigations on alkali stress should use more organs obtained at different developmental stages.

  12. Propagación clonal in vitro y enraizamiento de estacas de algodón nativo (Gossypium barbadense L.

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    Consuelo Rojas-Idrogo

    2013-12-01

    Full Text Available En este trabajo se evalúo el efecto de reguladores de crecimiento en la propagación clonal in vitro y el efecto de diferentes soluciones nutritivas y reguladores de crecimiento en el enraizamiento de estacas de algodón (Gossypium barbadense. En el enraizamiento se evaluó el efecto del agua corriente, las soluciones nutritivas de Knop y Knudson y los reguladores de crecimiento AIA, AIB y floroglucinol sobre estacas obtenidas de las zonas apical, media y basal de la planta. En la combinación ANA 0.1 mg/lt - BAP 1.0 y 2.0 mg/lt, después de 30 días de cultivo in vitro, se alcanzó la mayor elongación de brotes (38.1 y 30.7 mm y número de nudos formados (4.1 y 3.4; el mejor enraizamiento se observó con AIA 0.2 mg/lt formando 3.6 raíces. El enraizamiento de estacas, con brotes formados (40 y 50%, fue mayor cuando se utilizó el tercio medio y superior, tanto en agua corriente como en la solución de Knop y únicamente suplementados con AIB 25 y 50 mg/lt.

  13. Energy use analysis of cotton (Gossypium hirsutum L. production in Golestan Province and a few strategies for increasing resources productivity

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    M. Ahmadi

    2016-05-01

    Full Text Available Cotton (Gossypium hirsutum L. as a unique crop in natural fiber production has an important role in texture industry. It has also a large share in oil production for human nutrition and as a protein concentrate for animal feeding. Therefore, cotton role in job opportunities in agriculture, industry and business divisions are undeniable. In order to determine the share of each direct and indirect energy inputs (consisted of fossil fuels, human labore and ... in energy use efficiency (EUE of cotton production in Golestan Province (cotton pole of Iran a field survey was conducted during 2010. Necessary information has been collected via technical questionnaire and face to face interview with 23 farmers who produced cotton in 0.5 to 50 ha. According to data analysis EUE of cotton production in Golestan province estimated as amount of 1.0968. Results showed that the share of variant inputs for cotton production were different. Fuel for tractor and irrigation pump have 24 and 30% of energy input, respectively and in overall 54% of input energy in cotton production was devoted to diesel fuel. Fertilizers and chemicals with 24 and 13% have second and third share of energy use. For improvising productivity of resources (water, soil and chemical inputs and increment of EUE in cotton production at Golestan province a few technical and management strategy could be recommended. Our top recommendation have been focused on suitable fuel storage, correct operation and maintenance of machines, improvement of cultural practices and fertilizing management.

  14. Short Communication: Cotton (Gossypium hirsutum L. varieties responded differently to foliar applied boron in terms of quality and yield

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    S. Ahmad

    2009-05-01

    Full Text Available Foliar application of boron improves seed cotton yield and fiber traits. A field experiment was conducted to study the effects of foliar application of 37 grams of boron (B per acre (91.4 g ha-1 on quality and quantity of cotton (Gossypium hirsutum L.. Ten varieties of cotton viz, VH-183, VH-206, VH-208, VH-209, VH-214, VH-224, VH-225, VH-255, VH-257 and CIM-496 were sown at Cotton Research Station, Vehari during 2006-07 using randomized complete block design with three replications in two sets. The foliar application of B resulted in improvement of seed cotton yield (48-124%, ginning outturn (7.2-10.2%, staple length (1.4-10.1% and micronaire (7.4-32.8%. A significant genetic variability existed for all the traits studied in cotton. The cotton varieties VH-183 and VH-206 were found to be the most promising varieties which responded well to B foliar application compared to other varieties. The results suggested that foliar application of B can be helpful in improvement of cotton yield and other plant and fiber traits.

  15. Comprehensive cytological characterization of the Gossypium hirsutum genome based on the development of a set of chromosome cytological markers

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    Wenbo Shan

    2016-08-01

    Full Text Available Cotton is the world's most important natural fiber crop. It is also a model system for studying polyploidization, genomic organization, and genome-size variation. Integrating the cytological characterization of cotton with its genetic map will be essential for understanding its genome structure and evolution, as well as for performing further genetic-map based mapping and cloning. In this study, we isolated a complete set of bacterial artificial chromosome clones anchored to each of the 52 chromosome arms of the tetraploid cotton Gossypium hirsutum. Combining these with telomere and centromere markers, we constructed a standard karyotype for the G. hirsutum inbred line TM-1. We dissected the chromosome arm localizations of the 45S and 5S rDNA and suggest a centromere repositioning event in the homoeologous chromosomes AT09 and DT09. By integrating a systematic karyotype analysis with the genetic linkage map, we observed different genome sizes and chromosomal structures between the subgenomes of the tetraploid cotton and those of its diploid ancestors. Using evidence of conserved coding sequences, we suggest that the different evolutionary paths of non-coding retrotransposons account for most of the variation in size between the subgenomes of tetraploid cotton and its diploid ancestors. These results provide insights into the cotton genome and will facilitate further genome studies in G. hirsutum.

  16. Mycorrhizal colonization does not affect tolerance to defoliation of an annual herb in different light availability and soil fertility treatments but increases flower size in light-rich environments.

    Science.gov (United States)

    Aguilar-Chama, Ana; Guevara, Roger

    2012-01-01

    Heterogeneous distribution of resources in most plant populations results in a mosaic of plant physiological responses tending to maximize plant fitness. This includes plant responses to trophic interactions such as herbivory and mycorrhizal symbiosis which are concurrent in most plants. We explored fitness costs of 50% manual defoliation and mycorrhizal inoculation in Datura stramonium at different light availability and soil fertility environments in a greenhouse experiment. Overall, we showed that non-inoculated and mycorrhiza-inoculated plants did not suffer from 50% manual defoliation in all the tested combinations of light availability and soil fertility treatments, while soil nutrients and light availability predominately affected plant responses to the mycorrhizal inoculation. Fifty percent defoliation had a direct negative effect on reproductive traits whereas mycorrhiza-inoculated plants produced larger flowers than non-inoculated plants when light was not a limiting factor. Although D. stramonium is a facultative selfing species, other investigations had shown clear advantages of cross-pollination in this species; therefore, the effects of mycorrhizal inoculation on flower size observed in this study open new lines of inquiry for our understanding of plant responses to trophic interactions. Also in this study, we detected shifts in the limiting resources affecting plant responses to trophic interactions.

  17. Inhibitory effect of aqueous extract of different parts of Gossypium herbaceum on key enzymes linked with type 2 diabetes and oxidative stress in rat pancreas in vitro

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    Ayodeji Augustine Olabiyi

    2016-06-01

    Full Text Available This study sought to determine the inhibitory effect of aqueous extract of different parts (bark, leaf, and flower of cotton plant (Gossypium herbaceum on key enzymes linked with type 2 diabetes and oxidative stress in rat pancreas in vitro. The aqueous extract (1:10 w/v of Gossypium herbaceum was prepared and the ability of the extract to inhibit the activity of α-amylase and α-glucosidase as well as activities of pro-oxidant Fe2+-induced lipid peroxidation was determined spectrophotometrically. The results revealed that the three varieties were able to inhibit the activity of α-amylase and α-glucosidase in rat's pancreas in a dose dependent manner (0–88.8 mg/ml. Also, the incubation of pancreas tissue homogenate in the presence of Fe2+ caused a significant increase (233.3% in the malondialdehyde (MDA content of pancreas homogenate, nevertheless, the introduction of the aqueous extract inhibited MDA production dose dependently (0–33.33 mg/ml and also exhibited further antioxidant properties as represented by their high radical scavenging and Fe2+ chelating abilities. Inhibition of α-amylase and α-glucosidase activities has been the primary treatment for the management/prevention of type 2 diabetes. Therefore, the α-amylase and α-glucosidase inhibitory activities of aqueous extracts of different parts of Gossypium herbaceum in rat pancreas and prevention of lipid peroxidation in the tissue may be attributed to the presence of polyphenol content of the plant.

  18. ANÁLISIS DE LA PRESENCIA NATURAL DE MICORRIZAS EN CULTIVOS DE ALGODÓN (Gossypium barbadense L.) INOCULADOS CON Bacillus megaterium Y/O Bradyrhizobium yuanmingense

    OpenAIRE

    Valencia, Claudia; Universidad Nacional Agraria La Molina (Perú).; Zúñiga, Doris; Universidad Nacional Agraria La Molina (Perú).

    2015-01-01

    Para el proceso de optimización de protocolos se probaron diferentes modificaciones del proceso de tinción propuesto por Phillips & Hayman para permitir la identificación de estructuras intra- radicales derivadas de la interacción planta-hongo; para ello, se extrajeron las raíces de cultivos de algodón (Gossypium barbadense L.) inoculados con Bacillus megaterium (B), Bradyrhizobium yuanmingense (Br) y la interacción de ambos (I), además los controles positivo, con nitrato de potasio, (N+)...

  19. Effect ofthydiazuron and choline chloride bioregulators on yield and fruit quality ofthree apple (Malus domestica Borkh. varieties Efecto de Thidiazuron y cloruro de colina como biorreguladores sobre el rendimiento y la calidad del fruto en tres variedades de manzano (Malus domestica borkh.

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    Benincore Mauricio

    2000-12-01

    Full Text Available In order to improve yield and quality of Colombian apple fruits, Thydiazuron (TDZ and Choline Chloride (CC biorregulators were evaluated as supposed stimulants of growth and development of 'Princesa', 'Golden Delicious' y 'Gala' varieties in the «La Calera» zone (2650 masl. 50, lOOand 150 mg-L:' of TDZ were sprayed between 30 and 45 days after blooming (dab and 500, 1000 and 1500 mg-L-' of CC 118 dab, using a completely randomized design for 'Princesa' and 'Golden Delicious' and a completely randomized
    block design for 'Gala'. TDZ showed chemical thinning and
    cytokinine activity, decreasing the number and acidity of harvested fruits, but increased mean fruit weight, In 'Gala', TDZ increased the harvested fruit number per tree; with 150 mg-L:' fruit color increased while soluble solids (SS concentration declined. On the other side, in 'Gala' apples, CC applications decreased fruit number per tree and showed higher mean weights, volume and SS content of fruits, especially with 500 mg-L:'. In 'Golden Delicious' CC produced oblong fruits with higher SS content and lower flesh firrnness.
    Con el fin de mejorar rendimiento y calidad del fruto de la manzana nacional, se evaluaron los biorreguladores Thidiazuron (TDZ y Cloruro de Colina (CC como supuestos estimuladores del crecimiento y desarrollo del fruto en las variedades 'Princesa', 'Golden Delicious' y 'Gala' en la zona de «La Calera» (2650 msnm. Para tal fin, se aplicaron 50, 100 y 150 mg-L" de TDZ entre los 30 y 45 días después de floración (ddt y 500, 1000 y 1500 mg-L-' de CC 118 ddf,
    bajo diseño completamente aleatorizado para 'Princesa' y 'Golden Delicious' y bloque completos al azar para 'Gala'. Thidiazuron actuó como agente químico raleante y como citoquinina, disminuyendo en 'Golden Delicious' el número de frutos cosechados y la acidez, pero aumentando el peso promedio del fruto. En 'Gala', TDZ aumentó el número de frutos por árbol, a 150 mg-L-' aumentó la

  20. Validação de escala diagramática para estimativa de desfolha provocada pela ferrugemasiática em soja Validation of diagrammatic scale for estimating defoliation caused by the Asian rust in soybeans

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    Mario Hirano

    2010-09-01

    Full Text Available Este estudo teve como objetivo avaliar a precisão e acurácia de avaliadores com o uso de escala diagramática, em estimativas de desfolha provocada por doenças em soja. A escala apresenta seis níveis de severidade de desfolha (5, 15, 45, 65, 85 e 100%. As imagens utilizadas para avaliação foram obtidas em parcelas atacadas por ferrugem asiática (Phakopsora pachyrhizi, apresentando diferentes níveis de desfolha. A validação foi feita por dez avaliadores, utilizando-se como parâmetro de comparação dados reais da área com cobertura foliar, obtidos através de processamento de imagens, nos softwares Paint Shop Pro 4, e Adobe Photoshop 7.0. Quando não foi utilizada a escala, os avaliadores apresentaram tendência de subestimar a severidade de desfolha nos níveis mais baixos e de superestimar em níveis altos. A acurácia e precisão dos avaliadores aumentaram com o auxílio da escala diagramática.This study aimed to evaluate the precision and accuracy of evaluators using diagrammatic scale to estimate defoliation caused by diseases in soybean. The scale had six levels of severity of defoliation (5, 15, 45, 65, 85 and 100%. The images used for evaluation were obtained in plots attacked by Asian soybean rust (Phakopsora pachyrhizi, presenting different levels of defoliation. The validation was performed by ten evaluators, comparing estimated data with the actual data of the area coverage leaf, obtained by processing images in Paint Shop Pro 4 software, and Adobe Photoshop 7.0. The evaluators presented tendency to underestimate the defoliation in the lower levels of severity and overestimate the defoliation in high levels of severity, when the scale was not used. The accuracy and precision of the evaluators increased with the use of the scale diagrammatic.

  1. Efecto del régimen de defoliación sobre la producción de grano en trigo doble propósito Effect of the defoliation regime on grain production in dual purpose wheat

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    N. Peralta

    2011-06-01

    Full Text Available La utilización de cultivos de trigo con doble propósito contribuiría a realizar un uso más eficiente de los recursos ambientales. En Balcarce (Buenos Aires, Argentina se estableció un cultivo de trigo (Triticum aestivum, cv. Baguette 20 sembrado en fecha temprana (17 de marzo de 2006 para comparar la producción de forraje obtenida con tres regímenes de defoliación: T1 (tres defoliaciones, T2 (dos defoliaciones y TG (sin defoliaciones. En esos tres tratamientos y en otro no defoliado sembrado en fecha normal para la producción de grano (7 de junio, TN se cuantificó la biomasa aérea (g MS m², el rendimiento de grano (kg ha-1 y sus componentes. La producción de forraje de T1 fue similar que la de T2 (497 y 392 g m-2, respectivamente. Las defoliaciones posteriores al estado de dos nudos (estado Zadoks 32 afectaron negativamente la radiación fotosintéticamente activa interceptada por el cultivo, disminuyendo tanto el número de granos m-2 como el peso por grano; en consecuencia, la producción de grano cayó 60% respecto de TG y 71% respecto de TN. Se estableció una relación cuantitativa entre la disminución del rendimiento en grano y el momento del último corte (i.e., días entre la última defoliación y antesis. El trigo presenta la ventaja de poseer un destino alternativo a su uso forrajero, que no la presentan otros verdeos de invierno. Puede destinarse sólo para uso forrajero, sólo para producir grano, o se lo puede utilizar buscando un balance entre la producción de forraje y grano.The utilization of dual purpose wheat crops may contribute to perform a more efficient use of environmental resources. In Balcarce (Buenos Aires, Argentina a wheat crop (Triticum aestivum, cv. Baguette 20 was seeded at an early date (March 17, 2006 and the forage production was compared with three defoliation frequencies: T1 (three defoliations; T2 (two defoliations and TG (without defoliations. The aerial biomass, grain yield (kg ha-1 and its

  2. Partial Dominance, Overdominance and Epistasis as the Genetic Basis of Heterosis in Upland Cotton (Gossypium hirsutum L.)

    Science.gov (United States)

    Wang, Yumei; Hua, Jinping

    2015-01-01

    Determination of genetic basis of heterosis may promote hybrid production in Upland cotton (Gossypium hirsutum L.). This study was designed to explore the genetic mechanism of heterosis for yield and yield components in F2: 3 and F2: 4 populations derived from a hybrid ‘Xinza No. 1’. Replicated yield field trials of the progenies were conducted in 2008 and 2009. Phenotypic data analyses indicated overdominance in F1 for yield and yield components. Additive and dominance effects at single-locus level and digenic epistatic interactions at two-locus level were analyzed by 421 marker loci spanning 3814 cM of the genome. A total of 38 and 49 QTLs controlling yield and yield components were identified in F2: 3 and F2: 4 populations, respectively. Analyses of these QTLs indicated that the effects of partial dominance and overdominance contributed to heterosis in Upland cotton simultaneously. Most of the QTLs showed partial dominance whereas 13 QTLs showing overdominance in F2:3 population, and 19 QTLs showed overdominance in F2:4. Among them, 21 QTLs were common in both F2: 3 and F2: 4 populations. A large number of two-locus interactions for yield and yield components were detected in both generations. AA (additive × additive) epistasis accounted for majority portion of epistatic effects. Thirty three complementary two-locus homozygotes (11/22 and 22/11) were the best genotypes for AA interactions in terms of bolls per plant. Genotypes of double homozygotes, 11/22, 22/11 and 22/22, performed best for AD/DA interactions, while genotype of 11/12 performed best for DD interactions. These results indicated that (1) partial dominance and overdominance effects at single-locus level and (2) epistasis at two-locus level elucidated the genetic basis of heterosis in Upland cotton. PMID:26618635

  3. Engineering cotton (Gossypium hirsutum L.) for resistance to cotton leaf curl disease using viral truncated AC1 DNA sequences.

    Science.gov (United States)

    Hashmi, Jamil A; Zafar, Yusuf; Arshad, Muhammad; Mansoor, Shahid; Asad, Shaheen

    2011-04-01

    Several important biological processes are performed by distinct functional domains found on replication-associated protein (Rep) encoded by AC1 of geminiviruses. Two truncated forms of replicase (tAC1) gene, capable of expressing only the N-terminal 669 bp (5'AC1) and C-terminal 783 bp (3'AC1) nucleotides cloned under transcriptional control of the CaMV35S were introduced into cotton (Gossypium hirsutum L.) using LBA4404 strain of Agrobacterium tumefaciens to make use of an interference strategy for impairing cotton leaf curl virus (CLCuV) infection in transgenic cotton. Compared with nontransformed control, we observed that transgenic cotton plants overexpressing either N-terminal (5'AC1) or C-terminal (3'AC1) sequences confer resistance to CLCuV by inhibiting replication of viral genomic and β satellite DNA components. Molecular analysis by Northern blot hybridization revealed high transgene expression in early and late growth stages associated with inhibition of CLCuV replication. Of the eight T(1) transgenic lines tested, six had delayed and minor symptoms as compared to nontransformed control lines which developed disease symptoms after 2-3 weeks of whitefly-mediated viral delivery. Virus biological assay and growth of T(2) plants proved that transgenic cotton plants overexpressing 5'- and 3'AC1 displayed high resistance level up to 72, 81%, respectively, as compared to non-transformed control plants following inoculation with viruliferous whiteflies giving significantly high cotton seed yield. Progeny analysis of these plants by polymerase chain reaction (PCR), Southern blotting and virus biological assay showed stable transgene, integration, inheritance and cotton leaf curl disease (CLCuD) resistance in two of the eight transgenic lines having single or two transgene insertions. Transgenic cotton expressing partial AC1 gene of CLCuV can be used as virus resistance source in cotton breeding programs aiming to improve virus resistance in cotton crop.

  4. Development and bin mapping of gene-associated interspecific SNPs for cotton (Gossypium hirsutum L.) introgression breeding efforts.

    Science.gov (United States)

    Hulse-Kemp, Amanda M; Ashrafi, Hamid; Zheng, Xiuting; Wang, Fei; Hoegenauer, Kevin A; Maeda, Andrea B V; Yang, S Samuel; Stoffel, Kevin; Matvienko, Marta; Clemons, Kimberly; Udall, Joshua A; Van Deynze, Allen; Jones, Don C; Stelly, David M

    2014-10-30

    Cotton (Gossypium spp.) is the largest producer of natural fibers for textile and is an important crop worldwide. Crop production is comprised primarily of G. hirsutum L., an allotetraploid. However, elite cultivars express very small amounts of variation due to the species monophyletic origin, domestication and further bottlenecks due to selection. Conversely, wild cotton species harbor extensive genetic diversity of prospective utility to improve many beneficial agronomic traits, fiber characteristics, and resistance to disease and drought. Introgression of traits from wild species can provide a natural way to incorporate advantageous traits through breeding to generate higher-producing cotton cultivars and more sustainable production systems. Interspecific introgression efforts by conventional methods are very time-consuming and costly, but can be expedited using marker-assisted selection. Using transcriptome sequencing we have developed the first gene-associated single nucleotide polymorphism (SNP) markers for wild cotton species G. tomentosum, G. mustelinum, G. armourianum and G. longicalyx. Markers were also developed for a secondary cultivated species G. barbadense cv. 3-79. A total of 62,832 non-redundant SNP markers were developed from the five wild species which can be utilized for interspecific germplasm introgression into cultivated G. hirsutum and are directly associated with genes. Over 500 of the G. barbadense markers have been validated by whole-genome radiation hybrid mapping. Overall 1,060 SNPs from the five different species have been screened and shown to produce acceptable genotyping assays. This large set of 62,832 SNPs relative to cultivated G. hirsutum will allow for the first high-density mapping of genes from five wild species that affect traits of interest, including beneficial agronomic and fiber characteristics. Upon mapping, the markers can be utilized for marker-assisted introgression of new germplasm into cultivated cotton and in

  5. Systematic Analysis and Comparison of Nucleotide-Binding Site Disease Resistance Genes in a Diploid Cotton Gossypium raimondii

    Science.gov (United States)

    Wei, Hengling; Li, Wei; Sun, Xiwei; Zhu, Shuijin; Zhu, Jun

    2013-01-01

    Plant disease resistance genes are a key component of defending plants from a range of pathogens. The majority of these resistance genes belong to the super-family that harbors a Nucleotide-binding site (NBS). A number of studies have focused on NBS-encoding genes in disease resistant breeding programs for diverse plants. However, little information has been reported with an emphasis on systematic analysis and comparison of NBS-encoding genes in cotton. To fill this gap of knowledge, in this study, we identified and investigated the NBS-encoding resistance genes in cotton using the whole genome sequence information of Gossypium raimondii. Totally, 355 NBS-encoding resistance genes were identified. Analyses of the conserved motifs and structural diversity showed that the most two distinct features for these genes are the high proportion of non-regular NBS genes and the high diversity of N-termini domains. Analyses of the physical locations and duplications of NBS-encoding genes showed that gene duplication of disease resistance genes could play an important role in cotton by leading to an increase in the functional diversity of the cotton NBS-encoding genes. Analyses of phylogenetic comparisons indicated that, in cotton, the NBS-encoding genes with TIR domain not only have their own evolution pattern different from those of genes without TIR domain, but also have their own species-specific pattern that differs from those of TIR genes in other plants. Analyses of the correlation between disease resistance QTL and NBS-encoding resistance genes showed that there could be more than half of the disease resistance QTL associated to the NBS-encoding genes in cotton, which agrees with previous studies establishing that more than half of plant resistance genes are NBS-encoding genes. PMID:23936305

  6. Artificial intelligence and regression analysis for Cd(II) ion biosorption from aqueous solution by Gossypium barbadense waste.

    Science.gov (United States)

    Fawzy, Manal; Nasr, Mahmoud; Nagy, Heba; Helmi, Shacker

    2018-02-01

    In this study, batch biosorption experiments were conducted to determine the removal efficiency of Cd(II) ion from aqueous solutions by Gossypium barbadense waste. The biosorbent was characterized by Fourier transform infrared spectroscopy (FTIR) and scanning electron microscopy (SEM) connected with energy dispersive X-ray (EDX). The sorption mechanism was described by complexation/chelation of Cd 2+ with the functional groups of O-H, C=O, -COO-, and C-O, as well as, cation-exchange with Mg 2+ and K + . At initial Cd(II) ion concentration (C o ), 50 mg/L, the adsorption equilibrium of 89.2% was achieved after 15 min under the optimum experimental factors of pH 6.0, biosorbent dosage 10 g/L, and particle diameter 0.125-0.25 mm. Both Langmuir and Freundlich models fitted well to the sorption data, suggesting the co-existence of monolayer coverage along with heterogenous surface biosorption. Artificial neural network (ANN) with a structure of 5-10-1 was performed to predict the Cd(II) ion removal efficiency. The ANN model provided high fit (R 2 0.923) to the experimental data and indicated that C o was the most influential input. A pure-quadratic model was developed to determine the effects of experimental factors on Cd(II) ion removal efficiency, which indicated the limiting nature of pH and biosorbent dosage on Cd(II) adsorption. Based on the regression model (R 2 0.873), the optimum experimental factors were pH 7.61, biosorbent dosage 24.74 g/L, particle size 0.125-0.25 mm, and adsorption time 109.77 min, achieving Cd 2+ removal of almost 100% at C o 50 mg/L.

  7. Cotton fiber elongation network revealed by expression profiling of longer fiber lines introgressed with different Gossypium barbadense chromosome segments.

    Science.gov (United States)

    Fang, Lei; Tian, Ruiping; Li, Xinghe; Chen, Jiedan; Wang, Sen; Wang, Peng; Zhang, Tianzhen

    2014-10-02

    Cotton fiber, a highly elongated, thickened single cell of the seed epidermis, is a powerful cell wall research model. Fiber length, largely determined during the elongation stage, is a key property of fiber quality. Several studies using expressed sequence tags and microarray analysis have identified transcripts that accumulate preferentially during fiber elongation. To further show the mechanism of fiber elongation, we used Digital Gene Expression Tag Profiling to compare transcriptome data from longer fiber chromosome introgressed lines (CSILs) containing segments of various Gossypium barbadense chromosomes with data from its recurrent parent TM-1 during fiber elongation (from 5 DPA to 20 DPA). A large number of differentially expressed genes (DEGs) involved in carbohydrate, fatty acid and secondary metabolism, particularly cell wall biosynthesis, were highly upregulated during the fiber elongation stage, as determined by functional enrichment and pathway analysis. Furthermore, DEGs related to hormone responses and transcription factors showed upregulated expression levels in the CSILs. Moreover, metabolic and regulatory network analysis indicated that the same pathways were differentially altered, and distinct pathways exhibited altered gene expression, in the CSILs. Interestingly, mining of upregulated DEGs in the introgressed segments of these CSILs based on D-genome sequence data showed that these lines were enriched in glucuronosyltransferase, inositol-1, 4, 5-trisphosphate 3-kinase and desulfoglucosinolate sulfotransferase activity. These results were similar to the results of transcriptome analysis. This report provides an integrative network about the molecular mechanisms controlling fiber length, which are mainly tied to carbohydrate metabolism, cell wall biosynthesis, fatty acid metabolism, secondary metabolism, hormone responses and Transcription factors. The results of this study provide new insights into the critical factors associated with cell

  8. Fine-mapping qFS07.1 controlling fiber strength in upland cotton (Gossypium hirsutum L.).

    Science.gov (United States)

    Fang, Xiaomei; Liu, Xueying; Wang, Xiaoqin; Wang, Wenwen; Liu, Dexin; Zhang, Jian; Liu, Dajun; Teng, Zhonghua; Tan, Zhaoyun; Liu, Fang; Zhang, Fengjiao; Jiang, Maochao; Jia, Xiuling; Zhong, Jianwei; Yang, Jinghong; Zhang, Zhengsheng

    2017-04-01

    KEY MESSAGE: qFS07.1 controlling fiber strength was fine-mapped to a 62.6-kb region containing four annotated genes. RT-qPCR and sequence of candidate genes identified an LRR RLK gene as the most likely candidate. Fiber strength is an important component of cotton fiber quality and is associated with other properties, such as fiber maturity, fineness, and length. Stable QTL qFS07.1, controlling fiber strength, had been identified on chromosome 7 in an upland cotton recombinant inbred line (RIL) population from a cross (CCRI35 × Yumian1) described in our previous studies. To fine-map qFS07.1, an F 2 population with 2484 individual plants from a cross between recombinant line RIL014 and CCRI35 was established. A total of 1518 SSR primer pairs, including 1062, designed from chromosome 1 of the Gossypium raimondii genome and 456 from chromosome 1 of the G. arboreum genome (corresponding to the QTL region) were used to fine-map qFS07.1, and qFS07.1 was mapped into a 62.6-kb genome region which contained four annotated genes on chromosome A07 of G. hirsutum. RT-qPCR and comparative analysis of candidate genes revealed a leucine-rich repeat protein kinase (LRR RLK) family protein to be a promising candidate gene for qFS07.1. Fine mapping and identification of the candidate gene for qFS07.1 will play a vital role in marker-assisted selection (MAS) and the study of mechanism of cotton fiber development.

  9. Comparison of rhizosphere properties as affected by different Bt- and non-Bt-cotton (Gossypium hirsutum L.) genotypes and fertilization.

    Science.gov (United States)

    Ahamd, Maqshoof; Abbasi, Waleed Mumtaz; Jamil, Moazzam; Iqbal, Muhammad; Hussain, Azhar; Akhtar, Muhammad Fakhar-U-Zaman; Nazli, Farheen

    2017-06-01

    Incorporation of genetically modified crops in the cropping system raises the need for studying the effect of these crops on the soil ecosystem. The current study aimed to compare the effect of Bacillus thuringiensis (Bt)- and non-Bt-cotton (Gossypium hirsutum L.) genotypes on rhizosphere properties under fertilized and unfertilized soil conditions. One non-Bt-cotton (IUB 75) and four Bt-cotton varieties (IUB-222, MM-58, IUB-13, FH-142) were sown in a Randomized Complete Block Design (RCBD) in a factorial fashion with three replications under unfertilized (T1) and fertilized (T2 at NPK 310-170-110 kg ha -1 ) soil conditions. The culturable soil bacterial population was recorded at flowering, boll opening, and harvesting stages, while other rhizosphere biological and chemical properties were recorded at harvesting. Results revealed that Bt-cotton genotypes IUB-222 and FH-142 showed significantly higher rhizosphere total nitrogen, NH 4 + -N, available phosphorus, and available potassium. Total organic carbon and microbial biomass carbon was also maximum in the rhizosphere of IUB-222 under fertilized conditions. Similarly, bacterial population (CFU g -1 ) at flowering stage and at harvesting was significantly higher in the rhizosphere of IUB-222 as compared to non-Bt- (IUB-75) and other Bt-cotton genotypes under same growth conditions. It showed that Bt genotypes can help in maintaining soil macronutrients (total nitrogen, available phosphorus, and available potassium) under proper nutrient management. Moreover, Bt-cotton genotypes seem to strengthen certain biological properties of the soil, thus increasing the growth and yield capability, maintaining available nutrients in the soil as compared to non-Bt cotton, while no harmful effects of Bt cotton on soil properties was detected.

  10. Molecular characterization of a transient expression gene encoding for 1-aminocyclopropane-1-carboxylate synthase in cotton (Gossypium hirsutum L.).

    Science.gov (United States)

    Wang, Xia; Zhang, Ying; Zhang, Jiedao; Cheng, Cheng; Guo, Xingqi

    2007-09-30

    Ethylene performs an important function in plant growth and development. 1-aminocyclopropane-1-carboxylate (ACC) synthase (ACS), the key enzyme involved in ethylene biosynthesis, has been the focus of most ethylene studies. Here, a cotton ACS gene referred to as Gossypium hirsutum ACS1 (GhACS1), was isolated. The full-length cDNA of GhACS1 encodes for a 476-amino acid protein which harbors seven conserved regions, 11 invariant amino acid residues, and the PLP binding active site, all of which characterize ACC synthases. Alignment analysis showed that GhACS1 shared a high degree of identity with other known ACC synthases from different species. Two introns were detected in the genomic DNA sequence, and the results of Southern blot analysis suggested that there might be a multi-gene family encoding for ACC synthase in cotton. From the phylogenetic tree constructed with 24 different kinds of ACC synthases, we determined that GhACS1 falls into group II, and was closely associated with the wound-inducible ACS of citrus. The analysis of the 5' flanking region of GhACS1 revealed a group of putative cis-acting elements. The results of expression analysis showed that GhACS1 displayed its transient expression nature after wounding, abscisic acid (ABA), and CuCl(2) treatments. These results indicate that GhACS1, which was transiently expressed in response to certain stimuli, may be involved in the production of ethylene for the transmission of stress signals.

  11. Identification and Characterization of miRNA Transcriptome in Asiatic Cotton (Gossypium arboreum) Using High Throughput Sequencing.

    Science.gov (United States)

    Farooq, Muhammad; Mansoor, Shahid; Guo, Hui; Amin, Imran; Chee, Peng W; Azim, M Kamran; Paterson, Andrew H

    2017-01-01

    MicroRNAs (miRNAs) are small 20-24nt molecules that have been well studied over the past decade due to their important regulatory roles in different cellular processes. The mature sequences are more conserved across vast phylogenetic scales than their precursors and some are conserved within entire kingdoms, hence, their loci and function can be predicted by homology searches. Different studies have been performed to elucidate miRNAs using de novo prediction methods but due to complex regulatory mechanisms or false positive in silico predictions, not all of them express in reality and sometimes computationally predicted mature transcripts differ from the actual expressed ones. With the availability of a complete genome sequence of Gossypium arboreum , it is important to annotate the genome for both coding and non-coding regions using high confidence transcript evidence, for this cotton species that is highly resistant to various biotic and abiotic stresses. Here we have analyzed the small RNA transcriptome of G. arboreum leaves and provided genome annotation of miRNAs with evidence from miRNA/miRNA ∗ transcripts. A total of 446 miRNAs clustered into 224 miRNA families were found, among which 48 families are conserved in other plants and 176 are novel. Four short RNA libraries were used to shortlist best predictions based on high reads per million. The size, origin, copy numbers and transcript depth of all miRNAs along with their isoforms and targets has been reported. The highest gene copy number was observed for gar-miR7504 followed by gar-miR166, gar-miR8771, gar-miR156, and gar-miR7484. Altogether, 1274 target genes were found in G. arboreum that are enriched for 216 KEGG pathways. The resultant genomic annotations are provided in UCSC, BED format.

  12. Characterization of two TT2-type MYB transcription factors regulating proanthocyanidin biosynthesis in tetraploid cotton, Gossypium hirsutum.

    Science.gov (United States)

    Lu, Nan; Roldan, Marissa; Dixon, Richard A

    2017-08-01

    Two TT2-type MYB transcription factors identified from tetraploid cotton are involved in regulating proanthocyanidin biosynthesis, providing new strategies for engineering condensed tannins in crops. Proanthocyanidins (PAs), also known as condensed tannins, are important secondary metabolites involved in stress resistance in plants, and are health supplements that help to reduce cholesterol levels. As one of the most widely grown crops in the world, cotton provides the majority of natural fabrics and is a supplemental food for ruminant animals. The previous studies have suggested that PAs present in cotton are a major contributor to fiber color. However, the biosynthesis of PAs in cotton still remains to be elucidated. AtTT2 (transparent testa 2) is a MYB family transcription factor from Arabidopsis that initiates the biosynthesis of PAs by inducing the expression of multiple genes in the pathway. In this study, we isolated two R2R3-type MYB transcription factors from Gossypium hirsutum that are homologous to AtTT2. Expression analysis showed that both genes were expressed at different levels in various cotton tissues, including leaf, seed coat, and fiber. Protoplast transactivation assays revealed that these two GhMYBs were able to activate promoters of genes encoding enzymes in the PA biosynthesis pathway, namely anthocyanidin reductase and leucoanthocyanidin reductase. Complementation experiments showed that both of the GhMYBs were able to recover the transparent testa seed coat phenotype of the Arabidopsis tt2 mutant by restoring PA biosynthesis. Ectopic expression of either of the two GhMYBs in Medicago truncatula hairy roots increased the contents of anthocyanins and PAs compared to control lines expressing the GUS gene, and expression levels of MtDFR, MtLAR, and MtANR were also elevated in lines expressing GhMYBs. Together, these data provide new insights into engineering condensed tannins in cotton.

  13. Characterization of a novel thermotolerant NAD+-dependent formate dehydrogenase from hot climate plant cotton (Gossypium hirsutumL.).

    Science.gov (United States)

    Kurt-Gür, Günseli; Ordu, Emel

    2018-03-01

    NAD + -dependent formate dehydrogenases (FDH, EC 1.2.1.2), providing energy to the cell in methylotrophic microorganisms, are stress proteins in higher plants and the level of FDH expression increases under several abiotic and biotic stress conditions. They are biotechnologically important enzymes in NAD(P)H regeneration as well as CO 2 reduction. Here, the truncated form of the Gossypium hirsutum fdh1 cDNA was cloned into pQE-2 vector, and overexpressed in Escherichia coli DH5α-T1 cells. Recombinant GhFDH1 was purified 26.3-fold with a yield of 87.3%. Optimum activity was observed at pH 7.0, when substrate is formate. Kinetic analyses suggest that GhFDH1 has considerably high affinity to formate (0.76 ± 0.07 mM) and NAD + (0.06 ± 0.01 mM). At the same time, the affinity (1.98 ± 0.4 mM) and catalytic efficiency (0.0041) values of the enzyme for NADP + show that GhFDH1 is a valuable enzyme for protein engineering studies that is trying to change the coenzyme preference from NAD to NADP which has a much higher cost than that of NAD. Improving the NADP specificity is important for NADPH regeneration which is an important coenzyme used in many biotechnological production processes. The T m value of GhFDH1 is 53.3 °C and the highest enzyme activity is measured at 30 °C with a half-life of 61 h. Whilst further improvements are still required, the obtained results show that GhFDH1 is a promising enzyme for NAD(P)H regeneration for its prominent thermostability and NADP + specificity.

  14. Development of Agrobacterium-mediated virus-induced gene silencing and performance evaluation of four marker genes in Gossypium barbadense.

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    Jinhuan Pang

    Full Text Available Gossypiumbarbadense is a cultivated cotton species and possesses many desirable traits, including high fiber quality and resistance to pathogens, especially Verticilliumdahliae (a devastating pathogen of Gossypium hirsutum, the main cultivated species. These elite traits are difficult to be introduced into G. hirsutum through classical breeding methods. In addition, genetic transformation of G. barbadense has not been successfully performed. It is therefore important to develop methods for evaluating the function and molecular mechanism of genes in G. barbadense. In this study, we had successfully introduced a virus-induced gene silencing (VIGS system into three cultivars of G. barbadense by inserting marker genes into the tobacco rattle virus (TRV vector. After we optimized the VIGS conditions, including light intensity, photoperiod, seedling age and Agrobacterium strain, 100% of plants agroinfiltrated with the GaPDS silencing vector showed white colored leaves. Three other marker genes, GaCLA1, GaANS and GaANR, were employed to further test this VIGS system in G. barbadense. The transcript levels of the endogenous genes in the silenced plants were reduced by more than 99% compared to control plants; these plants presented phenotypic symptoms 2 weeks after inoculation. We introduced a fusing sequence fragment of GaPDS and GaANR gene silencing vectors into a single plant, which resulted in both photobleaching and brownish coloration. The extent of silencing in plants agroinfiltrated with fusing two-gene-silencing vector was consistent with plants harboring a single gene silencing vector. The development of this VIGS system should promote analysis of gene function in G. barbadense, and help to contribute desirable traits for breeding of G. barbadense and G. hirsutum.

  15. Pectin Methylesterase and Pectin Remodelling Differ in the Fibre Walls of Two Gossypium Species with Very Different Fibre Properties

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    Liu, Qinxiang; Talbot, Mark; Llewellyn, Danny J.

    2013-01-01

    Pectin, a major component of the primary cell walls of dicot plants, is synthesized in Golgi, secreted into the wall as methylesters and subsequently de-esterified by pectin methylesterase (PME). Pectin remodelling by PMEs is known to be important in regulating cell expansion in plants, but has been poorly studied in cotton. In this study, genome-wide analysis showed that PMEs are a large multi-gene family (81 genes) in diploid cotton (Gossypium raimondii), an expansion over the 66 in Arabidopsis and suggests the evolution of new functions in cotton. Relatively few PME genes are expressed highly in fibres based on EST abundance and the five most abundant in fibres were cloned and sequenced from two cotton species. Their significant sequence differences and their stage-specific expression in fibres within a species suggest sub-specialisation during fibre development. We determined the transcript abundance of the five fibre PMEs, total PME enzyme activity, pectin content and extent of de-methylesterification of the pectin in fibre walls of the two cotton species over the first 25–30 days of fibre growth. There was a higher transcript abundance of fibre-PMEs and a higher total PME enzyme activity in G. barbadense (Gb) than in G. hirsutum (Gh) fibres, particularly during late fibre elongation. Total pectin was high, but de-esterified pectin was low during fibre elongation (5–12 dpa) in both Gh and Gb. De-esterified pectin levels rose thereafter when total PME activity increased and this occurred earlier in Gb fibres resulting in a lower degree of esterification in Gb fibres between 17 and 22 dpa. Gb fibres are finer and longer than those of Gh, so differences in pectin remodelling during the transition to wall thickening may be an important factor in influencing final fibre diameter and length, two key quality attributes of cotton fibres. PMID:23755181

  16. Identification and Characterization of miRNA Transcriptome in Asiatic Cotton (Gossypium arboreum Using High Throughput Sequencing

    Directory of Open Access Journals (Sweden)

    Muhammad Farooq

    2017-06-01

    Full Text Available MicroRNAs (miRNAs are small 20–24nt molecules that have been well studied over the past decade due to their important regulatory roles in different cellular processes. The mature sequences are more conserved across vast phylogenetic scales than their precursors and some are conserved within entire kingdoms, hence, their loci and function can be predicted by homology searches. Different studies have been performed to elucidate miRNAs using de novo prediction methods but due to complex regulatory mechanisms or false positive in silico predictions, not all of them express in reality and sometimes computationally predicted mature transcripts differ from the actual expressed ones. With the availability of a complete genome sequence of Gossypium arboreum, it is important to annotate the genome for both coding and non-coding regions using high confidence transcript evidence, for this cotton species that is highly resistant to various biotic and abiotic stresses. Here we have analyzed the small RNA transcriptome of G. arboreum leaves and provided genome annotation of miRNAs with evidence from miRNA/miRNA∗ transcripts. A total of 446 miRNAs clustered into 224 miRNA families were found, among which 48 families are conserved in other plants and 176 are novel. Four short RNA libraries were used to shortlist best predictions based on high reads per million. The size, origin, copy numbers and transcript depth of all miRNAs along with their isoforms and targets has been reported. The highest gene copy number was observed for gar-miR7504 followed by gar-miR166, gar-miR8771, gar-miR156, and gar-miR7484. Altogether, 1274 target genes were found in G. arboreum that are enriched for 216 KEGG pathways. The resultant genomic annotations are provided in UCSC, BED format.

  17. Analysis of [Gossypium capitis-viridis × (G.hirsutum × G.australe2] Trispecific Hybrid and Selected Characteristics.

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    Di Chen

    Full Text Available Speciation is always a contentious and challenging issue following with the presence of gene flow. In Gossypium, there are many valuable resources and wild diploid cotton especially C and B genome species possess some excellent traits which cultivated cotton always lacks. In order to explore character transferring rule from wild cotton to upland tetraploid cotton, the [G. capitis-viridis × (G. hirsutum × G. australe2] triple hybrid was synthesized by interspecies hybridization and chromosome doubling. Morphology comparisons were measured among this hybrid and its parents. It showed that trispecific hybrid F1 had some intermediate morphological characters like leaf style between its parents and some different characters from its parents, like crawl growth characteristics and two kind flower color. It is highly resistant to insects comparing with other cotton species by four year field investigation. By cytogenetic analysis, triple hybrid was further confirmed by meiosis behavior of pollen mother cells. Comparing with regular meiosis of its three parents, it was distinguished by the occurrence of polyads with various numbers of unbalanced microspores and finally generating various abnormal pollen grains. All this phenomenon results in the sterility of this hybrid. This hybrid was further identified by SSR marker from DNA molecular level. It showed that 98 selected polymorphism primers amplified effective bands in this hybrids and its parents. The genetic proportion of three parents in this hybrid is 47.8% from G. hirsutum, 14.3% from G. australe, 7.0% from G. capitis-viridis, and 30.9% recombination bands respectively. It was testified that wild genetic material has been transferred into cultivated cotton and this new germplasm can be incorporated into cotton breeding program.

  18. Characterization of a new partitivirus strain in Verticillium dahliae provides further evidence of the spread of the highly virulent defoliating pathotype through new introductions

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    Mari Carmen CAÑIZARES

    2015-12-01

    Full Text Available The soilborne pathogen Verticillium dahliae, causal agent of Verticillium wilt, has a worldwide distribution and many hosts of agronomic value. The worldwide spread of a highly virulent defoliating (D pathotype has greatly increased the threat posed by V. dahliae in olive trees. For effective disease management, it is important to know if the D pathotype is spreading long distances from contaminated material, or if D pathotype isolates may have originated locally from native V. dahliae populations several times. We identified a double-stranded RNA mycovirus in an olive D pathotype isolate from Turkey. Sequencing and phylogenetic analysis clustered the virus with members of the family Partitiviridae. The virus was most similar to a partitivirus previously identified in a V. dahliae isolate from cotton in China (VdPV1, with sequence identities of 94% and 91% at the nucleotide level for RNA1 and RNA2, respectively. The virus therefore corresponded to a strain of the established species, and we designated it VdPV1-ol (VdPV1 from olive. The identification of the same viral species in these two fungal isolates from geographically distant origins provides evidence of their relationships, supporting the hypothesis of long-distance movement of V. dahliae isolates.

  19. Mortality of the defoliator Euselasia eucerus (Lepidoptera: Riodinidae by biotic factors in an Eucalyptus urophylla plantation in Minas Gerais State, Brazil

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    José C. Zanuncio

    2009-03-01

    Full Text Available Euselasia eucerus (Hewitson, 1872 (Lepidoptera: Riodinidae is a Brazilian native species commonly found in Eucalyptus plantations. Biotic mortality factors of this defoliator were studied in a Eucalyptus urophylla plantation in Minas Gerais State, Brazil aiming to identify natural enemies and their impact on this insect. Euselasia eucerus had biotic mortality factors during all development stages. The most important were Trichogramma maxacalii Voegelé and Pointel, 1980 (Hymenoptera: Trichogrammatidae during egg stage (48.9%, a tachinid fly (Diptera: Tachinidae during larval stages (10% and Itoplectis sp. (Hymenoptera: Ichneumonidae during pupal stage (52.2%. The parasitism rate was higher in the basal part of the plant canopy (37.8%.Euselasia eucerus (Hewitson, 1872 (Lepidoptera: Riodinidae é uma espécie brasileira nativa, comumente encontrada em plantios de Eucalyptus. Um estudo da mortalidade por fatores bióticos desse desfolhador foi feito em um plantio de Eucalyptus urophylla no Estado de Minas Gerais, Brasil, com o objetivo de identificar os inimigos naturais e seu impacto sobre esse lepidóptero. Euselasia eucerus possui fatores bióticos de mortalidade durante todas as suas fases de desenvolvimento. Os mais importantes foram Trichogramma maxacalii Voegelé e Pointel, 1980 (Hymenoptera: Trichogrammatidae durante a fase de ovo (48,9%, um Diptera: Tachinidae durante a fase de larva (10% e Itoplectis sp. (Hymenoptera: Ichneumonidae durante a fase pupal (52,2%. A taxa de parasitismo foi mais elevada na parte basal de plantas de eucalipto (37,8%.

  20. Construction of a plant-transformation-competent BIBAC library and genome sequence analysis of polyploid Upland cotton (Gossypium hirsutum L.).

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    Lee, Mi-Kyung; Zhang, Yang; Zhang, Meiping; Goebel, Mark; Kim, Hee Jin; Triplett, Barbara A; Stelly, David M; Zhang, Hong-Bin

    2013-03-28

    Cotton, one of the world's leading crops, is important to the world's textile and energy industries, and is a model species for studies of plant polyploidization, cellulose biosynthesis and cell wall biogenesis. Here, we report the construction of a plant-transformation-competent binary bacterial artificial chromosome (BIBAC) library and comparative genome sequence analysis of polyploid Upland cotton (Gossypium hirsutum L.) with one of its diploid putative progenitor species, G. raimondii Ulbr. We constructed the cotton BIBAC library in a vector competent for high-molecular-weight DNA transformation in different plant species through either Agrobacterium or particle bombardment. The library contains 76,800 clones with an average insert size of 135 kb, providing an approximate 99% probability of obtaining at least one positive clone from the library using a single-copy probe. The quality and utility of the library were verified by identifying BIBACs containing genes important for fiber development, fiber cellulose biosynthesis, seed fatty acid metabolism, cotton-nematode interaction, and bacterial blight resistance. In order to gain an insight into the Upland cotton genome and its relationship with G. raimondii, we sequenced nearly 10,000 BIBAC ends (BESs) randomly selected from the library, generating approximately one BES for every 250 kb along the Upland cotton genome. The retroelement Gypsy/DIRS1 family predominates in the Upland cotton genome, accounting for over 77% of all transposable elements. From the BESs, we identified 1,269 simple sequence repeats (SSRs), of which 1,006 were new, thus providing additional markers for cotton genome research. Surprisingly, comparative sequence analysis showed that Upland cotton is much more diverged from G. raimondii at the genomic sequence level than expected. There seems to be no significant difference between the relationships of the Upland cotton D- and A-subgenomes with the G. raimondii genome, even though G

  1. Cotton (Gossypium hirsutum) 14-3-3 proteins participate in regulation of fibre initiation and elongation by modulating brassinosteroid signalling.

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    Zhou, Ying; Zhang, Ze-Ting; Li, Mo; Wei, Xin-Zheng; Li, Xiao-Jie; Li, Bing-Ying; Li, Xue-Bao

    2015-02-01

    Cotton (Gossypium hirsutum) fibre is an important natural raw material for textile industry in the world. Understanding the molecular mechanism of fibre development is important for the development of future cotton varieties with superior fibre quality. In this study, overexpression of Gh14-3-3L in cotton promoted fibre elongation, leading to an increase in mature fibre length. In contrast, suppression of expression of Gh14-3-3L, Gh14-3-3e and Gh14-3-3h in cotton slowed down fibre initiation and elongation. As a result, the mature fibres of the Gh14-3-3 RNAi transgenic plants were significantly shorter than those of wild type. This 'short fibre' phenotype of the 14-3-3 RNAi cotton could be partially rescued by application of 2,4-epibrassinolide (BL). Expression levels of the BR-related and fibre-related genes were altered in the Gh14-3-3 transgenic fibres. Furthermore, we identified Gh14-3-3 interacting proteins (including GhBZR1) in cotton. Site mutation assay revealed that Ser163 in GhBZR1 and Lys51/56/53 in Gh14-3-3L/e/h were required for Gh14-3-3-GhBZR1 interaction. Nuclear localization of GhBZR1 protein was induced by BR, and phosphorylation of GhBZR1 by GhBIN2 kinase was helpful for its binding to Gh14-3-3 proteins. Additionally, 14-3-3-regulated GhBZR1 protein may directly bind to GhXTH1 and GhEXP promoters to regulate gene expression for responding rapid fibre elongation. These results suggested that Gh14-3-3 proteins may be involved in regulating fibre initiation and elongation through their interacting with GhBZR1 to modulate BR signalling. Thus, our study provides the candidate intrinsic genes for improving fibre yield and quality by genetic manipulation. © 2014 Society for Experimental Biology, Association of Applied Biologists and John Wiley & Sons Ltd.

  2. Cloning and characterization of homeologous cellulose synthase catalytic subunit 2 genes from allotetraploid cotton (Gossypium hirsutum L.).

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    Kim, Hee Jin; Triplett, Barbara A; Zhang, Hong-Bin; Lee, Mi-Kyung; Hinchliffe, Doug J; Li, Ping; Fang, David D

    2012-02-25

    Cellulose synthase catalytic subunits (CesAs) are the catalytic sites within a multisubunit complex for cellulose biosynthesis in plants. CesAs have been extensively studied in diploid plants, but are not well characterized in polyploid plants. Gossypium hirsutum is an allotetraploid cotton species producing over 90% of the world's cotton fibers. Although G. hirsutum CesAs (GhCesAs) are responsible for cellulose production in cotton fiber, very limited numbers of GhCesA genes have been identified. Here, we report isolating and characterizing a pair of homeologous CesA2 genes and their full-length cDNAs from allotetraploid cotton. The GhCesA2-A(T) gene from the A-subgenome and GhCesA2-D(T) gene from the D-subgenome were screened from a G. hirsutum BAC library. These genes shared 92% sequence similarity throughout the entire sequence. The coding sequences were nearly identical, and the deduced amino acid sequences from GhCesA2-A(T) (1,039 amino acids) and GhCesA2-D(T) (1,040 amino acids) were identical except four amino acids, whereas the noncoding sequences showed divergence. Sequence analyses showed that all exons of GhCesA2-A(T) contained consensus splice donor dinucleotides, but one exon in GhCesA2-D(T) contained nonconsensus splice donor dinucleotides. Although the nonconsensus splice donor dinucleotides were previously suggested to be involved in alternative splice or pseudogenization, our results showed that a majority of GhCesA2-A(T) and GhCesA2-D(T) transcripts consisted of functional and full-length transcripts with little evidence for alternative mRNA isoforms in developing cotton fibers. Expression analyses showed that GhCesA2-A(T) and GhCesA2-D(T) shared common temporal and spatial expression patterns, and they were highly and preferentially expressed during the cellulose biosynthesis stage in developing cotton fibers. The observations of higher expression levels of both GhCesA2-A(T) and GhCesA2-D(T) in developing fibers of one near-isogenic line (NIL

  3. Genome-wide identification and characterization of SnRK2 gene family in cotton (Gossypium hirsutum L.).

    Science.gov (United States)

    Liu, Zhao; Ge, Xiaoyang; Yang, Zuoren; Zhang, Chaojun; Zhao, Ge; Chen, Eryong; Liu, Ji; Zhang, Xueyan; Li, Fuguang

    2017-06-12

    Sucrose non-fermenting-1-related protein kinase 2 (SnRK2) is a plant-specific serine/threonine kinase family involved in the abscisic acid (ABA) signaling pathway and responds to osmotic stress. A genome-wide analysis of this protein family has been conducted previously in some plant species, but little is known about SnRK2 genes in upland cotton (Gossypium hirsutum L.). The recent release of the G. hirsutum genome sequence provides an opportunity to identify and characterize the SnRK2 kinase family in upland cotton. We identified 20 putative SnRK2 sequences in the G. hirsutum genome, designated as GhSnRK2.1 to GhSnRK2.20. All of the sequences encoded hydrophilic proteins. Phylogenetic analysis showed that the GhSnRK2 genes were classifiable into three groups. The chromosomal location and phylogenetic analysis of the cotton SnRK2 genes indicated that segmental duplication likely contributed to the diversification and evolution of the genes. The gene structure and motif composition of the cotton SnRK2 genes were analyzed. Nine exons were conserved in length among all members of the GhSnRK2 family. Although the C-terminus was divergent, seven conserved motifs were present. All GhSnRK2s genes showed expression patterns under abiotic stress based on transcriptome data. The expression profiles of five selected genes were verified in various tissues by quantitative real-time RT-PCR (qRT-PCR). Transcript levels of some family members were up-regulated in response to drought, salinity or ABA treatments, consistent with potential roles in response to abiotic stress. This study is the first comprehensive analysis of SnRK2 genes in upland cotton. Our results provide the fundamental information for the functional dissection of GhSnRK2s and vital availability for the improvement of plant stress tolerance using GhSnRK2s.

  4. Mosquito Larvicidal Potential of Gossypium hirsutum (Bt cotton Leaves Extracts against Aedes aegypti and Anopheles stephensi larvae.

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    Chandrashekhar D Patil

    2014-06-01

    Full Text Available We aimed to extract the ingredients from leaves of Gossypium hirsutum (Bt cotton using different solvents and evaluate for potential use to control different larval stages of mosquito species, Aedes aegypti and Anopheles stephensi.Qualitative and quantitative estimation of ingredients from Go. hirsutum (Bt plant extract was carried out and their inhibitory action against mosquito larvae was determined using mosquito larvicidal assay.LC50 values of water, ethanol, ethyl acetate and hexane extracts for Ae. aegypti were 211.73±21.49, 241.64±19.92, 358.07±32.43, 401.03±36.19 and 232.56±26.00, 298.54±21.78, 366.50±30.59, 387.19±31.82 for 4(th instar of An. stephensi, respectively. The water extract displayed lowest LC50 value followed by ethanol, ethyl acetate and hexane. Owing to the comparatively better activity of water extract, its efficacy was further evaluated for mosquito larvicidal activity, which exhibited LC50 values of 133.95±12.79, 167.65±11.34 against 2(nd and 3(rd instars of Ae. aegypti and 145.48±11.76, 188.10±12.92 against 2(nd and 3(rd instars of An. stephensi, respectively. Crude protein from the water extract was precipitated using acetone and tested against 2(nd, 3(rd and 4(th instars of Ae. aegypti and An. stephensi. It revealed further decrease in LC50 values as 105.72±25.84, 138.23±23.18, 126.19±25.65, 134.04±04 and 137.88±17.59, 154.25±16.98 for 2(nd, 3(rd and 4(th instars of Ae. aegypti and An. stephensi, respectively.Leaves extracts of Go. hirsutum (Bt is potential mosquito larvicide and can be used as a potent alternative to chemical insecticides in integrated pest management.

  5. Mosquito Larvicidal Potential of Gossypium hirsutum (Bt cotton) Leaves Extracts against Aedes aegypti and Anopheles stephensi larvae.

    Science.gov (United States)

    Patil, Chandrashekhar D; Borase, Hemant P; Salunkhe, Rahul B; Suryawanshi, Rahul K; Narkhade, Chandrakant P; Salunke, Bipinchandra K; Patil, Satish V

    2014-01-01

    We aimed to extract the ingredients from leaves of Gossypium hirsutum (Bt cotton) using different solvents and evaluate for potential use to control different larval stages of mosquito species, Aedes aegypti and Anopheles stephensi. Qualitative and quantitative estimation of ingredients from Go. hirsutum (Bt) plant extract was carried out and their inhibitory action against mosquito larvae was determined using mosquito larvicidal assay. LC50 values of water, ethanol, ethyl acetate and hexane extracts for Ae. aegypti were 211.73±21.49, 241.64±19.92, 358.07±32.43, 401.03±36.19 and 232.56±26.00, 298.54±21.78, 366.50±30.59, 387.19±31.82 for 4(th) instar of An. stephensi, respectively. The water extract displayed lowest LC50 value followed by ethanol, ethyl acetate and hexane. Owing to the comparatively better activity of water extract, its efficacy was further evaluated for mosquito larvicidal activity, which exhibited LC50 values of 133.95±12.79, 167.65±11.34 against 2(nd) and 3(rd) instars of Ae. aegypti and 145.48±11.76, 188.10±12.92 against 2(nd) and 3(rd) instars of An. stephensi, respectively. Crude protein from the water extract was precipitated using acetone and tested against 2(nd), 3(rd) and 4(th) instars of Ae. aegypti and An. stephensi. It revealed further decrease in LC50 values as 105.72±25.84, 138.23±23.18, 126.19±25.65, 134.04±04 and 137.88±17.59, 154.25±16.98 for 2(nd), 3(rd) and 4(th) instars of Ae. aegypti and An. stephensi, respectively. Leaves extracts of Go. hirsutum (Bt) is potential mosquito larvicide and can be used as a potent alternative to chemical insecticides in integrated pest management.

  6. QTL delineation for five fiber quality traits based on an intra-specific Gossypium hirsutum L. recombinant inbred line population.

    Science.gov (United States)

    Jia, Xiaoyun; Wang, Hantao; Pang, Chaoyou; Ma, Qifeng; Su, Junji; Wei, Hengling; Song, Meizhen; Fan, Shuli; Yu, Shuxun

    2018-02-08

    Gossypium hirsutum L. is the most important fiber crop worldwide and contributes to more than 95% of global cotton production. Marker-assisted selection (MAS) is an effective approach for improving fiber quality, and quantitative trait loci (QTL) mapping of fiber quality traits is important for cotton breeding. In this study, a permanent intra-specific recombinant inbred line (RIL) population containing 137 families was used for fiber quality testing. Based on a previously reported high-density genetic map with an average marker distance of 0.63 cM, 186 additive QTLs were obtained for five fiber quality traits over five consecutive years, including 39 for fiber length (FL), 36 for fiber strength (FS), 50 for fiber uniformity (FU), 33 for micronaire (MC) and 28 for fiber elongation (FE). Three stable QTLs, qMC-A4-1, qMC-D2-3 and qFS-D9-1, were detected in four datasets, and another eight stable QTLs, qMC-A4-2, qMC-D11-2, qFU-A9-1, qFU-A10-4, qFS-D11-1, qFL-D9-2, qFL-D11-1 and qFE-A3-2, were detected in three datasets. The annotated genes in these 11 stable QTLs were collected, and these genes included many transcription factors with functions during fiber development. 33 QTL coincidence regions were found, and these involved nearly half of the total QTLs. Four chromosome regions containing at least 6 QTLs were promising for fine mapping. In addition, 41 pairs of epistatic QTLs (e-QTLs) were screened, including 6 for FL, 30 for FS, 2 for FU and 3 for MC. The identification of stable QTLs adds valuable information for further QTL fine mapping and gene positional cloning for fiber quality genetic detection and provides useful markers for further molecular breeding in enhancing fiber quality.

  7. Grazing ecology of female lambs on Italian ryegrass plus red clover pasture under different defoliation intensities Ecologia do pastejo por cordeiras em pastagem de azevém e trevo-vermelho sob diversas intensidades de desfolha

    Directory of Open Access Journals (Sweden)

    Carine Lisete Glienke

    2010-01-01

    Full Text Available The relationship between pasture dynamics and ingestive behavior of female lambs was studied on Italian ryegrass (Lolium multiflorum Lam. plus red clover (Trifolium pratense L. mixture under a range of defoliation intensities. Rotational grazing was used and the grazing interval was determined by the thermal sum of 313 degree days. The initial pre-grazing canopy height disappearance values were 65 (very high, 58 (high, 47 (medium and 37% (low. The sward vertical structure was similar among defoliation intensities. The forage allowance decreased linearly as defoliation intensities increased, with 0.35 bite/minute reduction for each 1% increase in forage allowance. The bite rate and number of bites/feeding station decreased with reduced contribution of leaves in the sward structure. It was associated, respectively, with an increase and a decrease of NDF and CP levels in forage as grazed by female lambs. The pasture cycle proves to be more important than defoliation intensities as a source for changes in feeding stations and displacement patterns of female lambs.Estudou-se a relação entre a dinâmica do pasto e o comportamento ingestivo de cordeiras em pastagem de azevém (Lolium multiflorum Lam. e trevo-vermelho (Trifolium pratense L. em diferentes intensidades de desfolha. O pastejo foi rotacionado e o intervalo entre pastejos foi determinado pela soma térmica de 313 graus-dia. Os valores de desaparecimento da altura do dossel no pré-pastejo foram de 65 (muito alta, 58 (alta, 47 (média e 37% (baixa, respectivamente. A estrutura vertical do pasto foi semelhante entre as intensidades de desfolha testadas. A oferta de forragem diminuiu linearmente com o aumento da intensidade de desfolha, com redução de 0,35 bocado/minuto a cada 1% a mais na oferta de forragem. A taxa de bocados e o número de bocados/estação alimentar reduziram com a diminuição da contribuição de folhas na estrutura da pastagem, acompanhada do aumento do teor de FDN e

  8. The Hairless Stem Phenotype of Cotton (Gossypium barbadense) Is Linked to a Copia-Like Retrotransposon Insertion in a Homeodomain-Leucine Zipper Gene (HD1).

    Science.gov (United States)

    Ding, Mingquan; Ye, Wuwei; Lin, Lifeng; He, Shae; Du, Xiongming; Chen, Aiqun; Cao, Yuefen; Qin, Yuan; Yang, Fen; Jiang, Yurong; Zhang, Hua; Wang, Xiyin; Paterson, Andrew H; Rong, Junkang

    2015-09-01

    Cotton (Gossypium) stem trichomes are mostly single cells that arise from stem epidermal cells. In this study, a homeodomain-leucine zipper gene (HD1) was found to cosegregate with the dominant trichome locus previously designated as T1 and mapped to chromosome 6. Characterization of HD1 orthologs revealed that the absence of stem trichomes in modern Gossypium barbadense varieties is linked to a large retrotransposon insertion in the ninth exon, 2565 bp downstream from the initial codon in the At subgenome HD1 gene (At-GbHD1). In both the At and Dt subgenomes, reduced transcription of GbHD1 genes is caused by this insertion. The disruption of At-HD1 further affects the expression of downstream GbMYB25 and GbHOX3 genes. Analyses of primitive cultivated accessions identified another retrotransposon insertion event in the sixth exon of At-GbHD1 that might predate the previously identified retrotransposon in modern varieties. Although both retrotransposon insertions results in similar phenotypic changes, the timing of these two retrotransposon insertion events fits well with our current understanding of the history of cotton speciation and dispersal. Taken together, the results of genetics mapping, gene expression and association analyses suggest that GbHD1 is an important component that controls stem trichome development and is a promising candidate gene for the T1 locus. The interspecific phenotypic difference in stem trichome traits also may be attributable to HD1 inactivation associated with retrotransposon insertion. Copyright © 2015 by the Genetics Society of America.

  9. Distribution and differentiation of wild, feral, and cultivated populations of perennial upland cotton (Gossypium hirsutum L. in Mesoamerica and the Caribbean.

    Directory of Open Access Journals (Sweden)

    Geo Coppens d'Eeckenbrugge

    Full Text Available Perennial forms of Gossypium hirsutum are classified under seven races. Five Mesoamerican races would have been derived from the wild race 'yucatanense' from northern Yucatán. 'Marie-Galante', the main race in the Caribbean, would have developed from introgression with G. barbadense. The racial status of coastal populations from the Caribbean has not been clearly defined. We combined Ecological Niche Modeling with an analysis of SSR marker diversity, to elucidate the relationships among cultivated, feral and wild populations of perennial cottons. Out of 954 records of occurrence in Mesoamerica and the Caribbean, 630 were classified into four categories cultivated, feral (disturbed and secondary habitats, wild/feral (protected habitats, and truly wild cotton (TWC populations. The widely distributed three first categories cannot be differentiated on ecological grounds, indicating they mostly belong to the domesticated pool. In contrast, TWC are restricted to the driest and hottest littoral habitats, in northern Yucatán and in the Caribbean (from Venezuela to Florida, as confirmed by their climatic envelope in the factorial analysis. Extrapolating this TWC climatic model to South America and the Pacific Ocean points towards places where other wild representatives of tetraploid Gossypium species have been encountered. The genetic analysis sample comprised 42 TWC accessions from 12 sites and 68 feral accessions from 18 sites; at nine sites, wild and feral accessions were collected in close vicinity. Principal coordinate analysis, neighbor joining, and STRUCTURE consistently showed a primary divergence between TWC and feral cottons, and a secondary divergence separating 'Marie-Galante' from all other feral accessions. This strong genetic structure contrasts strikingly with the absence of geographic differentiation. Our results show that TWC populations of Mesoamerica and the Caribbean constitute a homogenous gene pool. Furthermore, the relatively

  10. Distribution and differentiation of wild, feral, and cultivated populations of perennial upland cotton (Gossypium hirsutum L.) in Mesoamerica and the Caribbean.

    Science.gov (United States)

    Coppens d'Eeckenbrugge, Geo; Lacape, Jean-Marc

    2014-01-01

    Perennial forms of Gossypium hirsutum are classified under seven races. Five Mesoamerican races would have been derived from the wild race 'yucatanense' from northern Yucatán. 'Marie-Galante', the main race in the Caribbean, would have developed from introgression with G. barbadense. The racial status of coastal populations from the Caribbean has not been clearly defined. We combined Ecological Niche Modeling with an analysis of SSR marker diversity, to elucidate the relationships among cultivated, feral and wild populations of perennial cottons. Out of 954 records of occurrence in Mesoamerica and the Caribbean, 630 were classified into four categories cultivated, feral (disturbed and secondary habitats), wild/feral (protected habitats), and truly wild cotton (TWC) populations. The widely distributed three first categories cannot be differentiated on ecological grounds, indicating they mostly belong to the domesticated pool. In contrast, TWC are restricted to the driest and hottest littoral habitats, in northern Yucatán and in the Caribbean (from Venezuela to Florida), as confirmed by their climatic envelope in the factorial analysis. Extrapolating this TWC climatic model to South America and the Pacific Ocean points towards places where other wild representatives of tetraploid Gossypium species have been encountered. The genetic analysis sample comprised 42 TWC accessions from 12 sites and 68 feral accessions from 18 sites; at nine sites, wild and feral accessions were collected in close vicinity. Principal coordinate analysis, neighbor joining, and STRUCTURE consistently showed a primary divergence between TWC and feral cottons, and a secondary divergence separating 'Marie-Galante' from all other feral accessions. This strong genetic structure contrasts strikingly with the absence of geographic differentiation. Our results show that TWC populations of Mesoamerica and the Caribbean constitute a homogenous gene pool. Furthermore, the relatively low genetic

  11. A comparative study of the chemical and integrated treatments impact against the defoliating insects on the structure and dynamics of the edaphic mesofauna in two oak forests from North-Eastern Romania

    Directory of Open Access Journals (Sweden)

    Adina Cãlugãr

    2009-11-01

    Full Text Available The author presents in this paper some aspects about the edaphicmicroarthropods from the organic horizon of two forest soils belonging to the Ciurea Forest District, Iasi County: ªanta (mixed stands mainly with oak, chemically treated against defoliating insects and Poieni - Tomesti (Quercus robur and Quercuspetraea stands with integrated treatments. The study of edaphic microarthropods was performed both from qualitative and quantitative point of view. It considered the average of the total density of the microarthropod populations and by each taxonomic group, according to stations and subhorizons, as well as the ratio between thetaxonomical and trophic groups. The investigations concerning edaphic mesofauna consist in inventory and analysis of the mites belonging to Oribatida, Gamasida, Actinedida and Acaridida orders, of the Collembola, as well as other insects; other groups of microarthropods were taken into consideration too (pseudoscorpiones,myriapods etc. The consequences of the treatments against the defoliators on theedaphic mesofauna were performed at four different moments. Generally, lower densities were observed in the case of the chemically treated stands. The communities of the edaphic mesofauna from the integrated management treated stands are more stableduring the time. In the chemically treated stands, the densities of the microartropods vary between large limits; this instability could be assigned to this kind of treatment. The vertical distribution of the mesofauna depends on the textural characteristics of the soil, being at the same time a dynamic parameter that is modifyed according to the variation of the climatic factors.

  12. Tolerância da soja ao desfolhamento afetada pela redução do espaçamento entre fileiras Soybean tolerance to defoliation as affected by row spacing reduction

    Directory of Open Access Journals (Sweden)

    Geovano Parcianello

    2004-04-01

    Full Text Available A redução do espaçamento entre fileiras de 40 para 20cm incrementa a interceptação da radiação, o índice de área foliar e o rendimento de grãos. Este trabalho objetivou avaliar se a redução do espaçamento entre fileiras influencia a tolerância da soja à perda de área fotossintética. O experimento foi conduzido, em semeadura direta na Estação Experimental Agronômica da UFRGS, na safra 2000/01. Utilizou-se o delineamento experimental de blocos ao acaso, com quatro repetições, em parcelas sub-subdivididas. Os tratamentos foram desfolhamento em três estádios de desenvolvimento (V9 - nono nó, R2 - floração e R5 - inicio enchimento de grãos, dois espaçamentos entre fileiras (20 e 40cm e quatro níveis de desfolhamento (0 - testemunha, 33, 67 e 100%. Foi utilizada a cultivar FT-Abyara. Os desfolhamentos realizados no período reprodutivo reduziram o rendimento, sendo o estádio R5 o mais crítico. O rendimento médio de grãos da testemunha não desfolhada foi 21% maior no espaçamento de 20cm (4134kg ha-1 do que no de 40cm (3413kg ha-1 e manteve-se sempre superior, em todos os níveis de desfolhamento. O componente que mais influenciou o rendimento foi o número de legumes m-2. Estes resultados indicam que a redução do espaçamento entre fileiras de 40cm para 20cm é uma prática cultural favorável tanto para as plantas com área foliar intacta quando desfolhadas.The row spacing reduction from 40 to 20 cm increase radiation interception, leaf area index and grain yield. This experiment aimed to evaluate if the row spacing reduction influence soybean tolerance to loss of photosynthetic area. The research was performed using no-till tillage system at the Agronomic Experimental Station of Universidade Federal do Rio Grande do Sul, during the 2000/01 growing season. Treatments were arranged in a split-split plot randomized complete block design, with four replications. Treatments included five combination of defoliation in

  13. Potential for Water Savings by Defoliation of Saltcedar (Tamarix spp.) by Saltcedar Beetles (Diorhabda carinulata) in the Upper Colorado River Basin

    Science.gov (United States)

    Nagler, P. L.; Nguyen, U.; Bateman, H. L.; Jarchow, C.; van Riper, C., III; Waugh, W.; Glenn, E.

    2016-12-01

    Northern saltcedar beetles (Diorhabda carinata) have spread widely in riparian zones on the Colorado Plateau since their initial release in 2002. One goal of the releases was to reduce water consumption by saltcedar in order to conserve water through reduction of evapotranspiration (ET). The beetle moved south on the Virgin River and reached Big Bend State Park in Nevada in 2014, an expansion rate of 60 km/year. This is important because the beetle's photoperiod requirement for diapause was expected to prevent them from moving south of 37°N latitude, where endangered southwest willow flycatcher habitat occurs. In addition to focusing on the rate of dispersal of the beetles, we used remote sensing estimates of ET at 13 sites on the Colorado, San Juan, Virgin and Dolores rivers and their tributaries to estimate riparian zone ET before and after beetle releases. We estimate that water savings from 2007-2015 was 31.5 million m3/yr (25,547 acre-ft/yr), amounting to 0.258 % of annual river flow from the Upper Colorado River Basin to the Lower Basin. Reasons for the relatively low potential water savings are: 1) baseline ET before beetle release was modest (0.472 m/yr); 2) reduction in ET was low (0.061 m/yr) because saltcedar stands tended to recover after defoliation; 3) riparian ET even in the absence of beetles was only 1.8 % of river flows, calculated as the before beetle average annual ET (472 mm/yr) times the total area of saltcedar (51,588 ha) divided by the combined total average annual flows (1964-2015) from the upper to lower catchment areas of the Colorado River Basin at the USGS gages (12,215 million m3/yr or 9.90 million acre-ft). Further research is suggested to concentrate on the ecological impacts (both positive and negative) of beetles on riparian zones and on identifying management options to maximize riparian health.

  14. Suppression of cotton leaf curl disease symptoms in Gossypium hirsutum through over expression of host-encoded miRNAs.

    Science.gov (United States)

    Akmal, Mohd; Baig, Mirza S; Khan, Jawaid A

    2017-12-10

    Cotton leaf curl disease (CLCuD), a major factor resulting in the enormous yield losses in cotton crop, is caused by a distinct monopartite begomovirus in association with Cotton leaf curl Multan betasatellite (CLCuMB). Micro(mi)RNAs are known to regulate gene expression in eukaryotes, including antiviral defense in plants. In a previous study, we had computationally identified a set of cotton miRNAs, which were shown to have potential targets in the genomes of Cotton leaf curl Multan virus (CLCuMuV) and CLCuMB at multiple loci. In the current study, effect of Gossypium arboreum-encoded miRNAs on the genome of CLCuMuV and CLCuMB was investigated in planta. Two computationally predicted cotton-encoded miRNAs (miR398 and miR2950) that showed potential to bind multiple Open Reading Frames (ORFs; C1, C4, V1, and non- coding intergenic region) of CLCuMuV, and (βC1) of CLCuMB were selected. Functional validation of miR398 and miR2950 was done by overexpression approach in G. hirsutum var. HS6. A total of ten in vitro cotton plants were generated from independent events and subjected to biological and molecular analyses. Presence of the respective Precursor (pre)-miRNA was confirmed through PCR and Southern blotting, and their expression level was assessed by semi quantitative RT-PCR, Real Time quantitative PCR and northern hybridization in the PCR-positive lines. Southern hybridization revealed 2-4 copy integration of T-DNA in the genome of the transformed lines. Remarkably, expression of pre-miRNAs was shown up to 5.8-fold higher in the transgenic (T 0 ) lines as revealed by Real Time PCR. The virus resistance was monitored following inoculation of the transgenic cotton lines with viruliferous whitefly (Bemisia tabaci) insect vector. After inoculation, four of the transgenic lines remained apparently symptom free. While a very low titre of viral DNA could be detected by Rolling circle amplification, betasatellite responsible for symptom induction could not be detected

  15. Gossypium hirsutum L.

    Indian Academy of Sciences (India)

    cates recovery of mutants from high-energy-radiation treat- ments (Kohel et ... Field view of a just open pink flower on the mutant plant. We took great ... yield per plant (g). Lint (%). 33.3. 35.3. 34.5. 36.5. 35.8. Seed. Fuzzy. Fuzzy. Fuzzy. Fuzzy. Fuzzy. Lint colour. White. White. White. White. White. Boll weight (g). 2.97. 3.0. 3.5.

  16. Cotton (Gossypium hirsutum L.).

    Science.gov (United States)

    Rathore, Keerti S; Campbell, LeAnne M; Sherwood, Shanna; Nunes, Eugenia

    2015-01-01

    Cotton continues to be a crop of great economic importance in many developing and some developed countries. Cotton plants expressing the Bt gene to deter some of the major pests have been enthusiastically and widely accepted by the farmers in three of the major producing countries, i.e., China, India, and the USA. Considering the constraints related to its production and the wide variety of products derived from the cotton plant, it offers several target traits that can be improved through genetic engineering. Thus, there is a great need to accelerate the application of biotechnological tools for cotton improvement. This requires a simple, yet robust gene delivery/transformant recovery system. Recently, a protocol, involving large-scale, mechanical isolation of embryonic axes from germinating cottonseeds followed by direct transformation of the meristematic cells has been developed by an industrial laboratory. However, complexity of the mechanical device and the patent restrictions are likely to keep this method out of reach of most academic laboratories. In this chapter, we describe the method developed in our laboratory that has undergone further refinements and involves Agrobacterium-mediated transformation of cotton cells, selection of stable transgenic callus lines, and recovery of plants via somatic embryogenesis.

  17. Gossypium hirsutum L.

    Indian Academy of Sciences (India)

    dell

    . 0.387. 0.300. Admix. M002. Shi 09. Xinjiang. 0.978. 0.010. 0.012. 1. M003. Ji feng 107. Hebei. 0.631. 0.215. 0.154. 1. M004. Jin mian 31. Shanxi. 0.050. 0.412. 0.537. 3. M005. Lu 25A. Shandong. 0.956. 0.020. 0.024. 1. M006. Yin mian 1.

  18. (Gossypium barbadense) germplasm resources

    Indian Academy of Sciences (India)

    QI MA

    The SPSS 21.0 software (http://www.spss.com.cn/) was used to conduct variation, correlation and principal com- ponent analysis (PCA). The broad-sense heritability (h2. B. ) of each trait was estimated using SAS 8.1 software (SAS. Institute 1999). Results. Fibre yield and quality properties of G. barbadense germplasm.

  19. (Gossypium barbadense) germplasm resources

    Indian Academy of Sciences (India)

    Navya

    2017-03-28

    Mar 28, 2017 ... Because population structure analysis does not require any prior knowledge of the origin, geographic ..... barbadense germplasm accession and partitioned into segments representing admixture of ancestral ... The length of segments represents the percentage of a single ancestral background in that line.

  20. (Gossypium barbadense) germplasm resources

    Indian Academy of Sciences (India)

    QI MA

    species, accounting for 2% and 95%, respectively, of the annual worldwide cotton production (Cai et al. 2014). Although, G. barbadense has some shortcomings such as low-fibre yield, poor adaptability and difficulty in picking, it has superior fibre quality traits. The fibre traits of G. barbadense offer great potential for progress ...

  1. Gossypium hirsutum L.

    Indian Academy of Sciences (India)

    dell

    Campbell B.T., Williams V.E., Park W. 2009 Using molecular markers and field performance data to characterize the Pee Dee cotton germplasm resources. Euphytica 169, 285–301. doi:10.1007/s10681-009-9917-4. Chen G. and Du X.M. 2006 Genetic diversity of source germplasm of upland cotton in China as determined ...

  2. (Gossypium barbadense) germplasm resources

    Indian Academy of Sciences (India)

    Navya

    2017-03-28

    Mar 28, 2017 ... The R2 value represented the correlation between alleles at two loci, which is informative for evaluating the resolution of association approaches (Kantartzi et al. 2008). The SPSS 21.0 software (http://www.spss.com.cn/) was used to conduct variation, correlation and principal component analysis (PCA).

  3. Controle de plantas daninhas com cyanazine aplicado em mistura com outros herbicidas, na cultura do algodão (Gossypium hirsutum L. Weed control in cotton (Gossypium hirsutum L. with cyanazine and other herbicides

    Directory of Open Access Journals (Sweden)

    Julio Pedro Laca-Buendia

    1985-12-01

    Full Text Available Com a finalidade de estudar a mistura de tanque mais eficiente com cyanazine em aplicação de pré-emergência na cultura algodoeira (Gossypium hirsutum L. , foram estudados os seguintes tratamentos: cyanazine + diuron nas doses de 0,8 + 0,8 kg i.a/ha e 1,0 + 1,0 kg i.a/ha; cyanazine+ oryzalin , nas do sés de 1,2 + 0,8 kg i.a/ha e 1,6 + 1,2 kg i.a/h a; cyanazyne + metol a chlor, nas doses de 1,4 + 2,0 kg i.a/ha e 1,75 + 2,52 kg i.a/ ha;cianazine na dose de 1,75 kg i.a /ha; oryzalin na dose de 1,12 kg i.a/ha; metol achlor na dose de 2,52 kg i.a /ha e diuron na dose de 1,6 kg i.a /ha. Para efeito de comparação, utilizou-se uma testemunha sem capina e outra com capina manual. Nenhum tratamento apresentou injúria para as plantas de algodão e não houve diferenças significativas para o "stand" inicial. Já no "stand" final, a testemunha sem capina apresentou o menor número de plantas, sendo que não houve diferenças significativas dos outros tratamentos com a testemunha capinada. Para o rendimento, a mistura cyanazine + metolachior em ambas as doses estudadas, não apresentaram diferenças significativas da testemunha capinada. Quanto à altura da planta, peso de 100 sementes, porcentagem e índice de fibras não houve diferenças significativas entre os tratamentos estudados, somente o peso do capulho foi afetado pelo oryzalin. Pela avaliação visual (EWRC 1 a 9*, os herbicidas apres entaram um controle satisfatório somente até os 30 dias após aplicação, sendo que a mistura cyanazine + metolachlor foi efici ente quanto a testemunha capinada. No controle da Portulaca oleracea , a mistura cyanazine + oryzalin na maior dose e oryzalin apresentaram 71,4% de controle ate os 30 dias e 79,4% e 82,4%, respectivamente, até 45 dias da aplicação. Para Amaranthus sp., à exceção da cyanazine e cyanazine + diuron nas doses menores, não apresentaram nenhum controle, sendo que os outros herbicidas controlaram com eficiência superior a 70

  4. Historical Gypsy Moth Defoliation Frequency

    Data.gov (United States)

    U.S. Environmental Protection Agency — Gypsy moth populations may exist for many years at low densities such that it may be difficult to find any life stages. Then, for reasons that are not completely...

  5. Thidiazuron-induced shoot organogenesis of Cleome viscosa (L ...

    African Journals Online (AJOL)

    The highest rate of seed germination (55.3%) was noticed on full strength MS basal medium fortified with 0.5 mg/L GA3 after 30 days of culture. The excised 7 to 10 days old cotyledonary leaf, cotyledonary node and hypocotyls explants cultured on MS medium fortified with different concentration of individual cytokinin ...

  6. Thidiazuron-induced shoot organogenesis of Cleome viscosa (L ...

    African Journals Online (AJOL)

    MBA

    2014-02-26

    Feb 26, 2014 ... a simultaneous stress response (Guo et al., 2011). Therefore, TDZ emerged as an .... changes were recorded on the basis of visual observation. All experiments were .... Table 3. Optimum level of TDZ along with different auxins on microshoot induction in various explants of Cleome viscosa L. Explants.

  7. Novel thidiazuron-derived inhibitors of cytokinin oxidase/dehydrogenase

    Czech Academy of Sciences Publication Activity Database

    Nisler, Jaroslav; Kopečný, D.; Končitíková, R.; Zatloukal, Marek; Bazgier, Václav; Berka, K.; Zalabák, D.; Briozzo, P.; Strnad, Miroslav; Spíchal, Lukáš

    2016-01-01

    Roč. 92, 1-2 (2016), s. 235-248 ISSN 0167-4412 R&D Projects: GA MŠk(CZ) LO1204; GA ČR GA15-22322S Institutional support: RVO:61389030 Keywords : Cytokinin oxidase/dehydrogenase * Crystal structure * Molecular docking Subject RIV: EB - Genetics ; Molecular Biology Impact factor: 3.356, year: 2016

  8. Thidiazuron: A multi-dimensional plant growth regulator

    African Journals Online (AJOL)

    Jane

    2011-08-17

    Aug 17, 2011 ... the production of economically important secondary metabolites in some plant species (Nabila et al., 2003). The exogenous application of TDZ affects concentration of endogenous plant growth regulators in some members of dicots. TDZ affects pathways of purines and cytokinin metabolisms (Capelle et al., ...

  9. 40 CFR 180.403 - Thidiazuron; tolerances for residues.

    Science.gov (United States)

    2010-07-01

    ... metabolites in or on the following food commodities: Commodity Parts per million Cattle, fat 0.4 Cattle, meat 0.4 Cattle, meat byproducts 0.4 Cotton, gin byproducts 24.0 Cotton, undelinted seed 0.3 Goat, fat 0..., fat 0.4 Horse, meat 0.4 Horse, meat byproducts 0.4 Milk 0.05 Sheep, fat 0.4 Sheep, meat 0.4 Sheep...

  10. Densidade amostral aplicada ao monitoramento georreferenciado de lagartas desfolhadoras na cultura da soja Sample density applied to the georeferenced monitoring of defoliating caterpillars in soybean crop

    Directory of Open Access Journals (Sweden)

    Cinei Teresinha Riffel

    2012-12-01

    Full Text Available O conhecimento da distribuição espaço-temporal de insetos-praga na cultura da soja, por meio do uso de ferramentas da agricultura de precisão, tem sido apontado como uma importante estratégia no manejo integrado de pragas (MIP. Nesse sentido, o objetivo do trabalho foi avaliar a influência da densidade amostral no monitoramento de lagartas desfolhadoras na cultura da soja. O experimento foi conduzido em área experimental de 48,0ha, localizada no município de Júlio de Castilhos - RS, no ano agrícola 2008/2009. O monitoramento georreferenciado foi realizado seguindo três malhas amostrais regulares, 50x50m, 71x71m e 100x100m e também seguindo o método tradicional de amostragem. Durante todo o ciclo da cultura, e para cada malha amostral, foram realizadas cinco avaliações da infestação de lagartas, duas no estádio vegetativo e três no reprodutivo, com a utilização do pano-de-batida. Para analisar a distribuição espaço-temporal das lagartas na área, os dados foram submetidos à análise estatística descritiva e à geoestatística, utilizando semivariogramas e krigagem para elaboração dos mapas temáticos. Os resultados obtidos indicam que as grades amostrais avaliadas permitem caracterizar a distribuição espacial das lagartas e modelar a variabilidade espacial de lagartas na cultura da soja. A amostragem e monitoramento georreferenciado e posterior elaboração de mapas temáticos constituem-se numa alternativa potencial para agregarem-se às estratégias de MIP.The knowledge of the spatial and temporal distribution of pest insects on soybean crop through the use of precision agriculture tools, have been appointed as an important strategy in the integrated pest management (IPM. In this sense, the objective of this research was to evaluate the influence of sample density in the monitoring of defoliating caterpillars in soybean crop. The experiment was conducted in the experimental area of 47.98ha, located in Júlio de

  11. The Complexity of Posttranscriptional Small RNA Regulatory Networks Revealed by In Silico Analysis of Gossypium arboreum L. Leaf, Flower and Boll Small Regulatory RNAs.

    Directory of Open Access Journals (Sweden)

    Hongtao Hu

    Full Text Available MicroRNAs (miRNAs and secondary small interfering RNAs (principally phased siRNAs or trans-acting siRNAs are two distinct subfamilies of small RNAs (sRNAs that are emerging as key regulators of posttranscriptional gene expression in plants. Both miRNAs and secondary-siRNAs (sec-siRNAs are processed from longer RNA precursors by DICER-LIKE proteins (DCLs. Gossypium arboreum L., also known as tree cotton or Asian cotton, is a diploid, possibly ancestral relative of tetraploid Gossypium hirsutum L., the predominant type of commercially grown cotton worldwide known as upland cotton. To understand the biological significance of these gene regulators in G. arboreum, a bioinformatics analysis was performed on G. arboreum small RNAs produced from G. arboreum leaf, flower, and boll tissues. Consequently, 263 miRNAs derived from 353 precursors, including 155 conserved miRNAs (cs-miRNAs and 108 novel lineage-specific miRNAs (ls-miRNAs. Along with miRNAs, 2,033 miRNA variants (isomiRNAs were identified as well. Those isomiRNAs with variation at the 3'-miRNA end were expressed at the highest levels, compared to other types of variants. In addition, 755 pha-siRNAs derived 319 pha-siRNA gene transcripts (PGTs were identified, and the potential pha-siRNA initiators were predicted. Also, 2,251 non-phased siRNAs were found as well, of which 1,088 appeared to be produced by so-called cis- or trans-cleavage of the PGTs observed at positions differing from pha-siRNAs. Of those sRNAs, 148 miRNAs/isomiRNAs and 274 phased/non-phased siRNAs were differentially expressed in one or more pairs of tissues examined. Target analysis revealed that target genes for both miRNAs and pha-siRNAs are involved a broad range of metabolic and enzymatic activities. We demonstrate that secondary siRNA production could result from initial cleavage of precursors by both miRNAs or isomiRNAs, and that subsequently produced phased and unphased siRNAs could result that also serve as triggers

  12. Genome-Wide Analysis of the NF-YB Gene Family in Gossypium hirsutum L. and Characterization of the Role of GhDNF-YB22 in Embryogenesis.

    Science.gov (United States)

    Chen, Yanli; Yang, Zhaoen; Xiao, Yanqing; Wang, Peng; Wang, Ye; Ge, Xiaoyang; Zhang, Chaojun; Zhang, Xianlong; Li, Fuguang

    2018-02-06

    Members of the NF-YB transcription factor gene family play important roles in diverse processes related to plant growth and development, such as seed development, drought tolerance, and flowering time. However, the function of NF-YB genes in cotton remains unclear. A total of 23, 24, and 50 NF-YB genes were identified in Gossypium arboreum ( G. arboreum ), Gossypium raimondii ( G. raimondii ), and G. hirsutum , respectively. A systematic phylogenetic analysis was carried out in G. arboretum , G. raimondii , G. hirsutum , Arabidopsis thaliana , cacao, rice and, sorghum, where the 150 NF-YB genes were divided into five groups (α-ε). Of these groups, α is the largest clade, and γ contains the LEC1 type NF-YB proteins. Syntenic analyses revealed that paralogues of NF-YB genes in G. hirsutum exhibited good collinearity. Owing to segmental duplication within the A sub-genome (A t ) and D sub-genome (D t ), there was an expanded set of NF-YB genes in G. hirsutum . Furthermore, we investigated the structures of exons, introns, and conserved motifs of NF-YB genes in upland cotton. Most of the NF-YB genes had only one exon, and the genes from the same clade exhibited a similar motif pattern. Expression data show that most NF-YB genes were expressed ubiquitously, and only a few genes were highly expressed in specific tissues, as confirmed by quantitative real-time PCR (qRT-PCR) analysis. The overexpression of GhDNF-YB22 gene, predominantly expressed in embryonic tissues, indicates that GhDNF-YB22 may affect embryogenesis in cotton. This study is the first comprehensive characterization of the GhNF-YB gene family in cotton, and showed that NF-YB genes could be divided into five clades. The duplication events that occurred over the course of evolution were the major impetus for NF-YB gene expansion in upland cotton. Collectively, this work provides insight into the evolution of NF-YB in cotton and further our knowledge of this commercially important species.

  13. The Complexity of Posttranscriptional Small RNA Regulatory Networks Revealed by In Silico Analysis of Gossypium arboreum L. Leaf, Flower and Boll Small Regulatory RNAs

    Science.gov (United States)

    Hu, Hongtao; Rashotte, Aaron M.; Singh, Narendra K.; Weaver, David B.; Goertzen, Leslie R.; Singh, Shree R.; Locy, Robert D.

    2015-01-01

    MicroRNAs (miRNAs) and secondary small interfering RNAs (principally phased siRNAs or trans-acting siRNAs) are two distinct subfamilies of small RNAs (sRNAs) that are emerging as key regulators of posttranscriptional gene expression in plants. Both miRNAs and secondary-siRNAs (sec-siRNAs) are processed from longer RNA precursors by DICER-LIKE proteins (DCLs). Gossypium arboreum L., also known as tree cotton or Asian cotton, is a diploid, possibly ancestral relative of tetraploid Gossypium hirsutum L., the predominant type of commercially grown cotton worldwide known as upland cotton. To understand the biological significance of these gene regulators in G. arboreum, a bioinformatics analysis was performed on G. arboreum small RNAs produced from G. arboreum leaf, flower, and boll tissues. Consequently, 263 miRNAs derived from 353 precursors, including 155 conserved miRNAs (cs-miRNAs) and 108 novel lineage-specific miRNAs (ls-miRNAs). Along with miRNAs, 2,033 miRNA variants (isomiRNAs) were identified as well. Those isomiRNAs with variation at the 3’-miRNA end were expressed at the highest levels, compared to other types of variants. In addition, 755 pha-siRNAs derived 319 pha-siRNA gene transcripts (PGTs) were identified, and the potential pha-siRNA initiators were predicted. Also, 2,251 non-phased siRNAs were found as well, of which 1,088 appeared to be produced by so-called cis- or trans-cleavage of the PGTs observed at positions differing from pha-siRNAs. Of those sRNAs, 148 miRNAs/isomiRNAs and 274 phased/non-phased siRNAs were differentially expressed in one or more pairs of tissues examined. Target analysis revealed that target genes for both miRNAs and pha-siRNAs are involved a broad range of metabolic and enzymatic activities. We demonstrate that secondary siRNA production could result from initial cleavage of precursors by both miRNAs or isomiRNAs, and that subsequently produced phased and unphased siRNAs could result that also serve as triggers of a

  14. Ground measured evapotranspiration scaled to stand level using MODIS and Landsat sensors to study Tamarix spp.response to repeated defoliation by the Tamarix leaf beetle at two sites

    Science.gov (United States)

    Pearlstein, S.; Nagler, P. L.; Glenn, E. P.; Hultine, K. R.

    2012-12-01

    The Dolores River in Southern Utah and the Virgin River in Southern Nevada are ecosystems under pressure from increased groundwater withdrawal due to growing populations and introduced riparian species. We studied the impact of the biocontrol Tamarix leaf beetles (Dirohabda carinulata and D. elongata) on the introduced riparian species, Tamarix spp., phenology and water use over multiple cycles of annual defoliation. Heat balance sap flow measurements, leaf area index (LAI), well data, allometry and satellite imagery from Landsat Thematic Mapper 5 and EOS-1 Moderate Resolution Imaging Spectrometer (MODIS) sensors were used to assess the distribution of beetle defoliation and its effect on evapotranspiration (ET). Study objectives for the Virgin River were to measure pre-beetle arrival ET, while the Dolores River site has had defoliation since 2004 and is a site of long-term beetle effect monitoring. This study focuses on measurements conducted over two seasons, 2010 and 2011. At the Dolores River site, results from 2010 were inconclusive due to sensor malfunctions but plant ET by sap flow in 2011 averaged 1.02 mm/m^2 leaf area/day before beetle arrival, dropping to an average of 0.75 mm/m^2 leaf area/day after beetle arrival. Stand level estimations from May - December, 2010 by MODIS were about 0.63 mm/ day, results from Landsat were 0.51 mm/day in June and 0.78 in August. For January -September, 2011, MODIS values were about 0.6 mm/day, and Landsat was 0.57 mm/day in June and 0.62 mm/day in August. These values are lower than previously reported ET values for this site meaning that repeated defoliation does diminish stand level water use. The Virgin River site showed plant ET from sap flow averaged about 3.9-4 mm/m^2 leaf area/day from mid-May - September, 2010. In 2011, ET from sap flow averaged 3.83 mm/m^2 leaf area/day during June - July, but dropped to 3.73 mm/ m^2 leaf area/day after beetle arrival in August. The slight drop in plant ET is not significant

  15. Comportamento da cv. Pérola(Phaseolus vulgaris L. Submetida a diferentes níveis de desfolha artificial Effect of Different levels of defoliation on productivity of common beans (Phaseolus vulgaris L. cv. Perola

    Directory of Open Access Journals (Sweden)

    Murilo Fazolin

    2003-10-01

    Full Text Available Estudos sobre desfolha artificial são muito úteis, principalmente para simular danos às plantas, como os causados por insetos ou granizo, por exemplo. Em trabalhos com o feijoeiro, ficou evidente que os resultados são altamente dependentes da cultivar utilizada e das condições climáticas prevalecentes. Objetivou-se com este trabalho avaliar a redução na produtividadedevida à redução artificial da área foliar da cv. Pérola nas condições de Rio Branco, AC. O experimento foi conduzido no campo experimental da Embrapa Acre, em delineamento de blocos casualizados, com quatro repetições e esquema experimental de parcelas subdivididas, estudando-se nas parcelas cinco das etapas de desenvolvimento da planta (V3= primeira folha trifoliolada, V4= terceira folha trifoliolada, R6= floração, R7= formação de vagens e R8= enchimento de vagens e nas subparcelas, quatro níveis de desfolhamento (0%, 33%, 66% e 100%. Foram avaliadas, em média, 480 plantas nas 4 linhas centrais de cada subparcela, determinando-se o número de vagens por planta, o número de grãos por vagem e a produtividade de grãos. Paralelamente, em uma área adjacente, foram colhidas, ao acaso, 50 plantas de cada etapa de desenvolvimento para a obtenção da área foliar média. Nas etapas de desenvolvimento V3, V4 e R7, níveis de desfolhamento a partir de 33% causaram decréscimo no número de vagens por planta. O número de sementes por vagem não sofreu influência dos níveis de desfolhamento das plantas. O rendimento dos grãos foi significativamente reduzido à medida que as plantas foram submetidas a níveis crescentes de desfolha. A etapa de florescimento (R6 foi a que apresentou maior redução na produtividade como resposta à desfolha.Studies to evaluate artificial defoliation are very useful, mainly to simulate damages to plants, such, as the ones caused by insects or hail. Experiments with bean plant, indicated that the results are higly dependent on the

  16. A R2R3-MYB transcription factor that is specifically expressed in cotton (Gossypium hirsutum) fibers affects secondary cell wall biosynthesis and deposition in transgenic Arabidopsis.

    Science.gov (United States)

    Sun, Xiang; Gong, Si-Ying; Nie, Xiao-Ying; Li, Yang; Li, Wen; Huang, Geng-Qing; Li, Xue-Bao

    2015-07-01

    Secondary cell wall (SCW) is an important industrial raw material for pulping, papermaking, construction, lumbering, textiles and potentially for biofuel production. The process of SCW thickening of cotton fibers lays down the cellulose that will constitute the bulk (up to 96%) of the fiber at maturity. In this study, a gene encoding a MYB-domain protein was identified in cotton (Gossypium hirsutum) and designated as GhMYBL1. Quantitative real-time polymerase chain reaction (RT-PCR) analysis revealed that GhMYBL1 was specifically expressed in cotton fibers at the stage of secondary wall deposition. Further analysis indicated that this protein is a R2R3-MYB transcription factor, and is targeted to the cell nucleus. Overexpression of GhMYBL1 in Arabidopsis affected the formation of SCW in the stem xylem of the transgenic plants. The enhanced SCW thickening also occurred in the interfascicular fibers, xylary fibers and vessels of the GhMYBL1-overexpression transgenic plants. The expression of secondary wall-associated genes, such as CesA4, CesA7, CesA8, PAL1, F5H and 4CL1, were upregulated, and consequently, cellulose and lignin biosynthesis were enhanced in the GhMYBL1 transgenic plants. These data suggested that GhMYBL1 may participate in modulating the process of secondary wall biosynthesis and deposition of cotton fibers. © 2014 Scandinavian Plant Physiology Society.

  17. High Resolution Consensus Mapping of Quantitative Trait Loci for Fiber Strength, Length and Micronaire on Chromosome 25 of the Upland Cotton (Gossypium hirsutum L..

    Directory of Open Access Journals (Sweden)

    Zhen Zhang

    Full Text Available Cotton (Gossypium hirsutum L. is an important agricultural crop that provides renewable natural fiber resources for the global textile industry. Technological developments in the textile industry and improvements in human living standards have increased the requirement for supplies and better quality cotton. Upland cotton 0-153 is an elite cultivar harboring strong fiber strength genes. To conduct quantitative trait locus (QTL mapping for fiber quality in 0-153, we developed a population of 196 recombinant inbred lines (RILs from a cross between 0-153 and sGK9708. The fiber quality traits in 11 environments were measured and a genetic linkage map of chromosome 25 comprising 210 loci was constructed using this RIL population, mainly using simple sequence repeat markers and single nucleotide polymorphism markers. QTLs were identified across diverse environments using the composite interval mapping method. A total of 37 QTLs for fiber quality traits were identified on chromosome 25, of which 17 were stably expressed in at least in two environments. A stable fiber strength QTL, qFS-chr25-4, which was detected in seven environments and was located in the marker interval between CRI-SNP120491 and BNL2572, could explain 6.53%-11.83% of the observed phenotypic variations. Meta-analysis also confirmed the above QTLs with previous reports. Application of these QTLs could contribute to improving fiber quality and provide information for marker-assisted selection.

  18. High Resolution Consensus Mapping of Quantitative Trait Loci for Fiber Strength, Length and Micronaire on Chromosome 25 of the Upland Cotton (Gossypium hirsutum L.).

    Science.gov (United States)

    Zhang, Zhen; Li, Junwen; Muhammad, Jamshed; Cai, Juan; Jia, Fei; Shi, Yuzhen; Gong, Juwu; Shang, Haihong; Liu, Aiying; Chen, Tingting; Ge, Qun; Palanga, Koffi Kibalou; Lu, Quanwei; Deng, Xiaoying; Tan, Yunna; Li, Wei; Sun, Linyang; Gong, Wankui; Yuan, Youlu

    2015-01-01

    Cotton (Gossypium hirsutum L.) is an important agricultural crop that provides renewable natural fiber resources for the global textile industry. Technological developments in the textile industry and improvements in human living standards have increased the requirement for supplies and better quality cotton. Upland cotton 0-153 is an elite cultivar harboring strong fiber strength genes. To conduct quantitative trait locus (QTL) mapping for fiber quality in 0-153, we developed a population of 196 recombinant inbred lines (RILs) from a cross between 0-153 and sGK9708. The fiber quality traits in 11 environments were measured and a genetic linkage map of chromosome 25 comprising 210 loci was constructed using this RIL population, mainly using simple sequence repeat markers and single nucleotide polymorphism markers. QTLs were identified across diverse environments using the composite interval mapping method. A total of 37 QTLs for fiber quality traits were identified on chromosome 25, of which 17 were stably expressed in at least in two environments. A stable fiber strength QTL, qFS-chr25-4, which was detected in seven environments and was located in the marker interval between CRI-SNP120491 and BNL2572, could explain 6.53%-11.83% of the observed phenotypic variations. Meta-analysis also confirmed the above QTLs with previous reports. Application of these QTLs could contribute to improving fiber quality and provide information for marker-assisted selection.

  19. Recent long-distance transgene flow into wild populations conforms to historical patterns of gene flow in cotton (Gossypium hirsutum) at its centre of origin.

    Science.gov (United States)

    Wegier, A; Piñeyro-Nelson, A; Alarcón, J; Gálvez-Mariscal, A; Alvarez-Buylla, E R; Piñero, D

    2011-10-01

    Over 95% of the currently cultivated cotton was domesticated from Gossypium hirsutum, which originated and diversified in Mexico. Demographic and genetic studies of this species at its centre of origin and diversification are lacking, although they are critical for cotton conservation and breeding. We investigated the actual and potential distribution of wild cotton populations, as well as the contribution of historical and recent gene flow in shaping cotton genetic diversity and structure. We evaluated historical gene flow using chloroplast microsatellites and recent gene flow through the assessment of transgene presence in wild cotton populations, exploiting the fact that genetically modified cotton has been planted in the North of Mexico since 1996. Assessment of geographic structure through Bayesian spatial analysis, BAPS and Genetic Algorithm for Rule-set Production (GARP), suggests that G. hirsutum seems to conform to a metapopulation scheme, with eight distinct metapopulations. Despite evidence for long-distance gene flow, genetic variation among the metapopulations of G. hirsutum is high (He = 0.894 ± 0.01). We identified 46 different haplotypes, 78% of which are unique to a particular metapopulation, in contrast to a single haplotype detected in cotton cultivars. Recent gene flow was also detected (m = 66/270 = 0.24), with four out of eight metapopulations having transgenes. We discuss the implications of the data presented here with respect to the conservation and future breeding of cotton populations and genetic diversity at its centre of crop origin. © 2011 Blackwell Publishing Ltd.

  20. iTRAQ-facilitated proteomic profiling of anthers from a photosensitive male sterile mutant and wild-type cotton (Gossypium hirsutum L.).

    Science.gov (United States)

    Liu, Ji; Pang, Chaoyou; Wei, Hengling; Song, Meizhen; Meng, Yanyan; Ma, Jianhui; Fan, Shuli; Yu, Shuxun

    2015-08-03

    Male sterility is a common phenomenon in flowering plants, and it has been successfully developed in several crops by taking advantage of heterosis. Cotton (Gossypium hirsutum L.) is an important economic crop, used mainly for the production of textile fiber. Using a space mutation breeding technique, a novel photosensitive genetic male sterile mutant CCRI9106 was isolated from the wild-type upland cotton cultivar CCRI040029. To use CCRI9106 in cotton hybrid breeding, it is of great importance to study the molecular mechanisms of its male sterility. Here, histological and iTRAQ-facilitated proteomic analyses of anthers were performed to explore male sterility mechanisms of the mutant. Scanning and transmission electron microscopy of the anthers showed that the development of pollen wall in CCRI9106 was severely defective with a lack of exine formation. At the protein level, 6121 high-confidence proteins were identified and 325 of them showed differential expression patterns between mutant and wild-type anthers. The proteins up- or down-regulated in MT anthers were mainly involved in exine formation, protein degradation, calcium ion binding,etc. These findings provide valuable information on the proteins involved in anther and pollen development, and contribute to elucidate the mechanism of male sterility in upland cotton. Copyright © 2015. Published by Elsevier B.V.

  1. Identification of the group IIa WRKY subfamily and the functional analysis of GhWRKY17 in upland cotton (Gossypium hirsutum L.).

    Science.gov (United States)

    Gu, Lijiao; Li, Libei; Wei, Hengling; Wang, Hantao; Su, Junji; Guo, Yaning; Yu, Shuxun

    2018-01-01

    WRKY transcription factors play important roles in plant defense, stress response, leaf senescence, and plant growth and development. Previous studies have revealed the important roles of the group IIa GhWRKY genes in cotton. To comprehensively analyze the group IIa GhWRKY genes in upland cotton, we identified 15 candidate group IIa GhWRKY genes in the Gossypium hirsutum genome. The phylogenetic tree, intron-exon structure, motif prediction and Ka/Ks analyses indicated that most group IIa GhWRKY genes shared high similarity and conservation and underwent purifying selection during evolution. In addition, we detected the expression patterns of several group IIa GhWRKY genes in individual tissues as well as during leaf senescence using public RNA sequencing data and real-time quantitative PCR. To better understand the functions of group IIa GhWRKYs in cotton, GhWRKY17 (KF669857) was isolated from upland cotton, and its sequence alignment, promoter cis-acting elements and subcellular localization were characterized. Moreover, the over-expression of GhWRKY17 in Arabidopsis up-regulated the senescence-associated genes AtWRKY53, AtSAG12 and AtSAG13, enhancing the plant's susceptibility to leaf senescence. These findings lay the foundation for further analysis and study of the functions of WRKY genes in cotton.

  2. Introgression of genes for cotton leaf curl virus resistance and increased fiber strength from Gossypium stocksii into upland cotton (G. hirsutum).

    Science.gov (United States)

    Nazeer, W; Ahmad, S; Mahmood, K; Tipu, A L; Mahmood, A; Zhou, B

    2014-02-21

    Cotton leaf curl virus disease is a major hurdle for successful cotton production in Pakistan. There has been considerable economic loss due to this disease during the last decade. It would be desirable to have cotton varieties resistant to this disease. We explored the possibility of transferring virus resistant genes from the wild species Gossypium stocksii into MNH-786, a cultivar of G. hirsutum. Hybridization was done under field condition at the Cotton Research Station, Multan, during 2010-11. Boll shedding was controlled by application of exogenous hormones. F1 seeds were treated with 0.03% colchicine solution for 6 h and germinated. Cytological observations at peak squaring/flowering stage showed that these plants were hexaploid, having 2n = 6x = 78 chromosomes. The F1 plants showed intermediate expression for leaf size, leaf area, petiole length, bracteole number and size, bracteole area, bracteole dentation, flower size, pedicel size, and petal number and size. Moreover it possessed high fiber strength of 54.4 g/tex, which is 54% greater than that of the check variety, i.e. MNH-786 (G. hirsutum). The F1 population did not show any symptom of CLCuVD in the field, tested by grafting with CLCuVD susceptible rootstock (var. S12). We conclude that it is possible to transfer CLCuVD resistance and high fiber strength from G. stocksii to G. hirsutum.

  3. Molecular cloning and characterization of an inducible RNA-dependent RNA polymerase gene, GhRdRP, from cotton (Gossypium hirsutum L.).

    Science.gov (United States)

    Gao, Qiuqiang; Liu, Yan; Wang, Meimei; Zhang, Jiedao; Gai, Yingping; Zhu, Changxiang; Guo, Xingqi

    2009-01-01

    The RNA-dependent RNA polymerase (RdRP) cDNA, designated as Gossypium hirsutum RdRP (GhRdRP) was cloned from cotton by rapid amplification of cDNA ends-polymerase chain reaction (RACE-PCR). The full-length cDNA was 3,672 bp in size and encoded an open reading frame (ORF) of 1,110 amino acids which contained the RdRP conserved functional domain and the signature motif DbDGD. Amino acid sequence alignment indicated that GhRdRP shared the highest identity (66.37%) with AtRdRP1 and had homology with other plant, fungal, yeast and nematode RdRPs. The corresponding genomic DNA containing five exons and four introns, was isolated and analyzed. Also a 5'-flanking region was cloned, and a group of putative cis-acting elements were identified. Southern blot analysis revealed a single copy of the GhRdRP gene in cotton genome. The expression analysis by semi-quantitative RT-PCR showed that GhRdRP was induced by salicylic acid (SA), 5-chloroSA (5-CSA) and fungal infection of Rhizoctonia solani Kuhn. The cloning and characterization of the GhRdRP gene will be useful for further studies of biological roles of GhRdRP in plants.

  4. Genome-wide analysis of the HD-ZIP IV transcription factor family in Gossypium arboreum and GaHDG11 involved in osmotic tolerance in transgenic Arabidopsis.

    Science.gov (United States)

    Chen, Eryong; Zhang, Xueyan; Yang, Zhaoen; Wang, Xiaoqian; Yang, Zuoren; Zhang, Chaojun; Wu, Zhixia; Kong, Depei; Liu, Zhao; Zhao, Ge; Butt, Hamama Islam; Zhang, Xianlong; Li, Fuguang

    2017-06-01

    HD-ZIP IV proteins belong to the homeodomain-leucine zipper (HD-ZIP) transcription factor family and are involved in trichome development and drought stress in plants. Although some functions of the HD-ZIP IV group are well understood in Arabidopsis, little is known about their function in cotton. In this study, HD-ZIP genes were identified from three Gossypium species (G. arboreum, G. raimondii and G. hirsutum) and clustered into four families (HD-ZIP I, II, III and IV) to separate HD-ZIP IV from the other three families. Systematic analyses of phylogeny, gene structure, conserved domains, and expression profiles in different plant tissues and the expression patterns under osmotic stress in leaves were further conducted in G. arboreum. More importantly, ectopic overexpression of GaHDG11, a representative of the HD-ZIP IV family, confers enhanced osmotic tolerance in transgenic Arabidopsis plants, possibly due to elongated primary root length, lower water loss rates, high osmoprotectant proline levels, significant levels of antioxidants CAT, and/or SOD enzyme activity with reduced levels of MDA. Taken together, these observations may lay the foundation for future functional analysis of cotton HD-ZIP IV genes to unravel their biological roles in cotton.

  5. Identification of the group IIa WRKY subfamily and the functional analysis of GhWRKY17 in upland cotton (Gossypium hirsutum L..

    Directory of Open Access Journals (Sweden)

    Lijiao Gu

    Full Text Available WRKY transcription factors play important roles in plant defense, stress response, leaf senescence, and plant growth and development. Previous studies have revealed the important roles of the group IIa GhWRKY genes in cotton. To comprehensively analyze the group IIa GhWRKY genes in upland cotton, we identified 15 candidate group IIa GhWRKY genes in the Gossypium hirsutum genome. The phylogenetic tree, intron-exon structure, motif prediction and Ka/Ks analyses indicated that most group IIa GhWRKY genes shared high similarity and conservation and underwent purifying selection during evolution. In addition, we detected the expression patterns of several group IIa GhWRKY genes in individual tissues as well as during leaf senescence using public RNA sequencing data and real-time quantitative PCR. To better understand the functions of group IIa GhWRKYs in cotton, GhWRKY17 (KF669857 was isolated from upland cotton, and its sequence alignment, promoter cis-acting elements and subcellular localization were characterized. Moreover, the over-expression of GhWRKY17 in Arabidopsis up-regulated the senescence-associated genes AtWRKY53, AtSAG12 and AtSAG13, enhancing the plant's susceptibility to leaf senescence. These findings lay the foundation for further analysis and study of the functions of WRKY genes in cotton.

  6. Comparison of Ionomic and Metabolites Response under Alkali Stress in Old and Young Leaves of Cotton (Gossypium hirsutumL.) Seedlings.

    Science.gov (United States)

    Guo, Rui; Shi, LianXuan; Yang, ChunWu; Yan, ChangRong; Zhong, XiuLi; Liu, Qi; Xia, Xu; Li, HaoRu

    2016-01-01

    Soil salinization is an important agriculture-related environmental problem. Alkali stress and salt stress strongly influence the metabolic balance in plants. Salt and alkali stresses exert varied effects on old and young tissues, which display different adaptive strategies. In this study, we used cotton ( Gossypium hirsutum L.) plants as experimental material to investigate whether alkali stress induces ionic and metabolism changes in old and young leaves of cotton plants exposed to alkali stress. Results showed that alkali stress exerted a considerably stronger growth inhibition on old leaves than on young leaves. Under alkali stress, young leaves can maintain low Na and high K contents and retain relatively stable tricarboxylic acid cycle, resulting in greater accumulation of photosynthetic metabolites. In terms of metabolic response, the young and old leaves clearly displayed different mechanisms of osmotic regulation. The amounts of inositol and mannose significantly increased in both old and young leaves of cotton exposed to alkali stress, and the extent of increase was higher in young leaves than in old leaves. In old leaves, synthesis of amino acids, such as GABA, valine, and serine, was dramatically enhanced, and this phenomenon is favorable for osmotic adjustment and membrane stability. Organs at different developmental stages possibly display different mechanisms of metabolic regulation under stress condition. Thus, we propose that future investigations on alkali stress should use more organs obtained at different developmental stages.

  7. Polyamine and its metabolite H2O2 play a key role in the conversion of embryogenic callus into somatic embryos in upland cotton (Gossypium hirsutum L.

    Directory of Open Access Journals (Sweden)

    Wen-Han eCheng

    2015-12-01

    Full Text Available The objective of this study was to increase understanding about the mechanism by which polyamines (PAs promote the conversion of embryogenic calli (EC into somatic embryos in cotton (Gossypium hirsutum L.. We measured the levels of endogenous PAs and H2O2, quantified the expression levels of genes involved in the PAs pathway at various stages of cotton somatic embryogenesis (SE, and investigated the effects of exogenous PAs and H2O2 on differentiation and development of embryogenic calli. Putrescine (Put, spermidine (Spd and spermine (Spm significantly increased from the EC stage to the early phase of embryo differentiation. The levels of Put then decreased until the somatic embryo stage whereas Spd and Spm remained nearly the same. The expression profiles of GhADC genes were consistent with changes in Put during cotton SE. The H2O2 concentrations began to increase significantly at the EC stage, during which time both GhPAO1 and GhPAO4 expressions were highest and PAO activity was significantly increased. Exogenous Put, Spd, Spm and H2O2 not only enhanced embryogenic callus growth and embryo formation, but also alleviated the effects of D-arginine and 1, 8-diamino-octane, which are inhibitors of polyamine synthesis and PAO activity. Overall, the results suggest that both PAs and their metabolic product H2O2 are essential for the conversion of EC into somatic embryos in cotton.

  8. Comparative Analysis of the Cytology and Transcriptomes of the Cytoplasmic Male Sterility Line H276A and Its Maintainer Line H276B of Cotton (Gossypium barbadense L.

    Directory of Open Access Journals (Sweden)

    Xiangjun Kong

    2017-10-01

    Full Text Available In this study, the tetrad stage of microspore development in a new cotton (Gossypium barbadense L. cytoplasmic male sterility (CMS line, H276A, was identified using paraffin sections at the abortion stage. To explore the molecular mechanism underlying CMS in cotton, a comparative transcriptome analysis between the CMS line H276A and its maintainer line H276B at the tetrad stage was conducted using an Illumina HiSeq 4000 platform. The comparison of H276A with H276B revealed a total of 64,675 genes, which consisted of 59,255 known and 5420 novel genes. An analysis of the two libraries with a given threshold yielded a total of 3603 differentially expressed genes (DEGs, which included 1363 up- and 2240 down-regulated genes. Gene Ontology (GO annotation showed that 2171 DEGs were distributed into 38 categories, and a Kyoto Encyclopedia of Genes and Genomes (KEGG analysis showed that 2683 DEGs were classified into 127 groups. Thirteen DEGs were randomly selected and detected by quantitative reverse-transcribed PCR (qRT-PCR, and the results indicated that the transcriptome sequencing results were reliable. The bioinformatic analysis results in conjunction with previously reported data revealed key DEGs that might be associated with the male sterility features of H276A. Our results provide a comprehensive foundation for understanding anther development and will accelerate the study of the molecular mechanisms of CMS in cotton.

  9. Elargissement de la base génétique de la principale espèce de cotonnier cultivé Gossypium hirsutum L. par la création et l'exploitation de lignées monosomiques d'addition

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    Sarr D.

    2009-01-01

    Full Text Available Genetic broadening of the main cultivated cotton species Gossypium hirsutum L. by creation and exploitation of monosomic alien addition lines. The genus Gossypium is composed of about forty wild diploïd species that constitute an important reservoir of interesting genes for the genetic improvement of Gossypium hirsutum L., the main cultivated cotton species. Creation of monosomic alien addition lines (MAAL, made up of plants having in addition to the chromosome set of the cultivated species one wild species' supernumerary chromosome, is an interesting way to exploit this diversity. Numerous constraints limit the creation of MAAL, among them the most important is doubtless the production of first generation derivatives from pentaploids obtained by backcrossing G. hirsutum with bispecific hexaploid hybrids made of the cultivated species tetraploid genome and the genome of a donor diploid species. Raising this impediment by appropriate techniques allows to develop MAAL offering the possibility to introgress finely traits of interest from diploid species and to better understand genomic relationships between species in the genus Gossypium. Identification and exploitation of these MAAL have been for a long time based on not very reliable morphological characteristics and on the use of classical cytogenetic techniques, very heavy to implement. Nowadays, the exploitation of MAAL benefits from the great advances registered in molecular biology through the development of DNA markers and molecular cytogenetics. These progresses make of MAAL a promising way for the genetic improvement of the main cultivated cotton species.

  10. Demonstration of a diel trend in sensitivity of Gossypium to ozone: a step toward relating O3 injury to exposure or flux

    Science.gov (United States)

    Grantz, D.A.

    2013-01-01

    Plant injury by ozone (O3) occurs in three stages, O3 entrance through stomata, overcoming defences, and attack on bioreceptors. Concentration, deposition, and uptake of O3 are accessible by observation and modelling, while injury can be assessed visually or through remote sensing. However, the relationship between O3 metrics and injury is confounded by variation in sensitivity to O3. Sensitivity weighting parameters have previously been assigned to different plant functional types and growth stages, or by differentially weighting O3 concentrations, but diel and seasonal variability have not been addressed. Here a plant sensitivity parameter (S) is introduced, relating injury to O3 dose (uptake) using three independent injury endpoints in the crop species, Pima cotton (Gossypium barbadense). The diel variability of S was determined by assessment at 2h intervals. Pulses of O3 (15min) were used to assess passive (constitutive) defence mechanisms and dose was used rather than concentration to avoid genetic or environmental effects on stomatal regulation. A clear diel trend in S was apparent, with maximal sensitivity in mid-afternoon, not closely related to gas exchange, whole leaf ascorbate, or total antioxidant capacity. This physiologically based sensitivity parameter provides a novel weighting factor to improve modelled relationships between either flux or exposure to O3, and O3 impacts. This represents a substantial improvement over concentration- or phenology-based weighting factors currently in use. Future research will be required to characterize the variability and metabolic drivers of diel changes in S, and the performance of this parameter in prediction of O3 injury. PMID:23404900

  11. Diversity of endophytic fungi from different Verticillium-wilt-resistant Gossypium hirsutum and evaluation of antifungal activity against Verticillium dahliae in vitro.

    Science.gov (United States)

    Li, Zhi-Fang; Wang, Ling-Fei; Feng, Zi-Li; Zhao, Li-Hong; Shi, Yong-Qiang; Zhu, He-Qin

    2014-09-01

    Cotton plants were sampled and ranked according to their resistance to Verticillium wilt. In total, 642 endophytic fungi isolates representing 27 genera were recovered from Gossypium hirsutum root, stem, and leaf tissues, but were not uniformly distributed. More endophytic fungi appeared in the leaf (391) compared with the root (140) and stem (111) sections. However, no significant difference in the abundance of isolated endophytes was found among resistant cotton varieties. Alternaria exhibited the highest colonization frequency (7.9%), followed by Acremonium (6.6%) and Penicillium (4.8%). Unlike tolerant varieties, resistant and susceptible ones had similar endophytic fungal population compositions. In three Verticillium-wilt-resistant cotton varieties, fungal endophytes from the genus Alternaria were most frequently isolated, followed by Gibberella and Penicillium. The maximum concentration of dominant endophytic fungi was observed in leaf tissues (0.1797). The evenness of stem tissue endophytic communities (0.702) was comparatively more uniform than the other two tissues. Eighty endophytic fungi selected from 27 genera were evaluated for their inhibition activity against highly virulent Verticillium dahliae isolate Vd080 in vitro. Thirty-nine isolates exhibited fungistasis against the pathogen at varying degrees. Seven species, having high growth inhibition rates (≥75%), exhibited strong antifungal activity against V. dahliae. The antifungal activity of both volatile and nonvolatile metabolites was also investigated. The nonvolatile substances produced by CEF-818 (Penicillium simplicissimum), CEF-325 (Fusarium solani), CEF-714 (Leptosphaeria sp.), and CEF-642 (Talaromyces flavus) completely inhibited V. dahliae growth. These findings deepen our understanding of cotton-endophyte interactions and provide a platform for screening G. hirsutum endophytes with biocontrol potential.

  12. Water deficit in field-grown Gossypium hirsutum primarily limits net photosynthesis by decreasing stomatal conductance, increasing photorespiration, and increasing the ratio of dark respiration to gross photosynthesis.

    Science.gov (United States)

    Chastain, Daryl R; Snider, John L; Collins, Guy D; Perry, Calvin D; Whitaker, Jared; Byrd, Seth A

    2014-11-01

    Much effort has been expended to improve irrigation efficiency and drought tolerance of agronomic crops; however, a clear understanding of the physiological mechanisms that interact to decrease source strength and drive yield loss has not been attained. To elucidate the underlying mechanisms contributing to inhibition of net carbon assimilation under drought stress, three cultivars of Gossypium hirsutum were grown in the field under contrasting irrigation regimes during the 2012 and 2013 growing season near Camilla, Georgia, USA. Physiological measurements were conducted on three sample dates during each growing season (providing a broad range of plant water status) and included, predawn and midday leaf water potential (ΨPD and ΨMD), gross and net photosynthesis, dark respiration, photorespiration, and chlorophyll a fluorescence. End-of-season lint yield was also determined. ΨPD ranged from -0.31 to -0.95MPa, and ΨMD ranged from -1.02 to -2.67MPa, depending upon irrigation regime and sample date. G. hirsutum responded to water deficit by decreasing stomatal conductance, increasing photorespiration, and increasing the ratio of dark respiration to gross photosynthesis, thereby limiting PN and decreasing lint yield (lint yield declines observed during the 2012 growing season only). Conversely, even extreme water deficit, causing a 54% decline in PN, did not negatively affect actual quantum yield, maximum quantum yield, or photosynthetic electron transport. It is concluded that PN is primarily limited in drought-stressed G. hirsutum by decreased stomatal conductance, along with increases in respiratory and photorespiratory carbon losses, not inhibition or down-regulation of electron transport through photosystem II. It is further concluded that ΨPD is a reliable indicator of drought stress and the need for irrigation in field-grown cotton. Copyright © 2014 Elsevier GmbH. All rights reserved.

  13. A New Synthetic Amphiploid (AADDAA) between Gossypium hirsutum and G. arboreum Lays the Foundation for Transferring Resistances to Verticillium and Drought

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    Chen, Yu; Wang, Yingying; Zhao, Ting; Yang, Jianwei; Feng, Shouli; Nazeer, Wajad; Zhang, Tianzhen; Zhou, Baoliang

    2015-01-01

    Gossypium arboreum, a cultivated cotton species (2n = 26, AA) native to Asia, possesses invaluable characteristics unavailable in the tetraploid cultivated cotton gene pool, such as resistance to pests and diseases and tolerance to abiotic stresses. However, it is quite difficult to transfer favorable traits into Upland cotton through conventional methods due to the cross-incompatibility of G. hirsutum (2n = 52, AADD) and G. arboreum. Here, we improved an embryo rescue technique to overcome the cross-incompatibility between these two parents for transferring favorable genes from G. arboreum into G. hirsutum. Our results indicate that MSB2K supplemented with 0.5 mgl-1 kinetin and 250 mg-1 casein hydrolysate is an efficient initial medium for rescuing early (3 d after pollination) hybrid embryos. Eight putative hybrids were successfully obtained, which were further verified and characterized by cytology, molecular markers and morphological analysis. The putative hybrids were subsequently treated with different concentrations of colchicine solution to double their chromosomes. The results demonstrate that four putative hybrid plants were successfully chromosome-doubled by treatment with 0.1% colchicine for 24 h and become amphiploid, which were confirmed by cytological observation, self-fertilization and backcrossing. Preliminary assessments of resistance at seedling stage indicate that the synthetic amphiploid showed highly resistant to Verticillium and drought. The synthetic amphiploid between G. hirsutum × G. arboreum would lay the foundation for developing G. arboreum-introgressed lines with the uniform genetic background of G. hirsutum acc TM-1, which would greatly enhance and simplify the mining, isolation, characterization, cloning and use of G. arboreum-specific desirable genes in future cotton breeding programs. PMID:26061996

  14. The PIN gene family in cotton (Gossypium hirsutum): genome-wide identification and gene expression analyses during root development and abiotic stress responses.

    Science.gov (United States)

    He, Peng; Zhao, Peng; Wang, Limin; Zhang, Yuzhou; Wang, Xiaosi; Xiao, Hui; Yu, Jianing; Xiao, Guanghui

    2017-07-03

    Cell elongation and expansion are significant contributors to plant growth and morphogenesis, and are often regulated by environmental cues and endogenous hormones. Auxin is one of the most important phytohormones involved in the regulation of plant growth and development and plays key roles in plant cell expansion and elongation. Cotton fiber cells are a model system for studying cell elongation due to their large size. Cotton is also the world's most utilized crop for the production of natural fibers for textile and garment industries, and targeted expression of the IAA biosynthetic gene iaaM increased cotton fiber initiation. Polar auxin transport, mediated by PIN and AUX/LAX proteins, plays a central role in the control of auxin distribution. However, very limited information about PIN-FORMED (PIN) efflux carriers in cotton is known. In this study, 17 PIN-FORMED (PIN) efflux carrier family members were identified in the Gossypium hirsutum (G. hirsutum) genome. We found that PIN1-3 and PIN2 genes originated from the At subgenome were highly expressed in roots. Additionally, evaluation of gene expression patterns indicated that PIN genes are differentially induced by various abiotic stresses. Furthermore, we found that the majority of cotton PIN genes contained auxin (AuxREs) and salicylic acid (SA) responsive elements in their promoter regions were significantly up-regulated by exogenous hormone treatment. Our results provide a comprehensive analysis of the PIN gene family in G. hirsutum, including phylogenetic relationships, chromosomal locations, and gene expression and gene duplication analyses. This study sheds light on the precise roles of PIN genes in cotton root development and in adaption to stress responses.

  15. A New Synthetic Amphiploid (AADDAA between Gossypium hirsutum and G. arboreum Lays the Foundation for Transferring Resistances to Verticillium and Drought.

    Directory of Open Access Journals (Sweden)

    Yu Chen

    Full Text Available Gossypium arboreum, a cultivated cotton species (2n = 26, AA native to Asia, possesses invaluable characteristics unavailable in the tetraploid cultivated cotton gene pool, such as resistance to pests and diseases and tolerance to abiotic stresses. However, it is quite difficult to transfer favorable traits into Upland cotton through conventional methods due to the cross-incompatibility of G. hirsutum (2n = 52, AADD and G. arboreum. Here, we improved an embryo rescue technique to overcome the cross-incompatibility between these two parents for transferring favorable genes from G. arboreum into G. hirsutum. Our results indicate that MSB2K supplemented with 0.5 mg l(-1 kinetin and 250 mg(-1 casein hydrolysate is an efficient initial medium for rescuing early (3 d after pollination hybrid embryos. Eight putative hybrids were successfully obtained, which were further verified and characterized by cytology, molecular markers and morphological analysis. The putative hybrids were subsequently treated with different concentrations of colchicine solution to double their chromosomes. The results demonstrate that four putative hybrid plants were successfully chromosome-doubled by treatment with 0.1% colchicine for 24 h and become amphiploid, which were confirmed by cytological observation, self-fertilization and backcrossing. Preliminary assessments of resistance at seedling stage indicate that the synthetic amphiploid showed highly resistant to Verticillium and drought. The synthetic amphiploid between G. hirsutum × G. arboreum would lay the foundation for developing G. arboreum-introgressed lines with the uniform genetic background of G. hirsutum acc TM-1, which would greatly enhance and simplify the mining, isolation, characterization, cloning and use of G. arboreum-specific desirable genes in future cotton breeding programs.

  16. Cotton QTLdb: a cotton QTL database for QTL analysis, visualization, and comparison between Gossypium hirsutum and G. hirsutum × G. barbadense populations.

    Science.gov (United States)

    Said, Joseph I; Knapka, Joseph A; Song, Mingzhou; Zhang, Jinfa

    2015-08-01

    A specialized database currently containing more than 2200 QTL is established, which allows graphic presentation, visualization and submission of QTL. In cotton quantitative trait loci (QTL), studies are focused on intraspecific Gossypium hirsutum and interspecific G. hirsutum × G. barbadense populations. These two populations are commercially important for the textile industry and are evaluated for fiber quality, yield, seed quality, resistance, physiological, and morphological trait QTL. With meta-analysis data based on the vast amount of QTL studies in cotton it will be beneficial to organize the data into a functional database for the cotton community. Here we provide a tool for cotton researchers to visualize previously identified QTL and submit their own QTL to the Cotton QTLdb database. The database provides the user with the option of selecting various QTL trait types from either the G. hirsutum or G. hirsutum × G. barbadense populations. Based on the user's QTL trait selection, graphical representations of chromosomes of the population selected are displayed in publication ready images. The database also provides users with trait information on QTL, LOD scores, and explained phenotypic variances for all QTL selected. The CottonQTLdb database provides cotton geneticist and breeders with statistical data on cotton QTL previously identified and provides a visualization tool to view QTL positions on chromosomes. Currently the database (Release 1) contains 2274 QTLs, and succeeding QTL studies will be updated regularly by the curators and members of the cotton community that contribute their data to keep the database current. The database is accessible from http://www.cottonqtldb.org.

  17. Relative contribution of Na+/K+homeostasis, photochemical efficiency and antioxidant defense system to differential salt tolerance in cotton (Gossypium hirsutum L.) cultivars.

    Science.gov (United States)

    Wang, Ning; Qiao, Wenqing; Liu, Xiaohong; Shi, Jianbin; Xu, Qinghua; Zhou, Hong; Yan, Gentu; Huang, Qun

    2017-10-01

    In this study, the role of specific components of different coping strategies to salt load were identified. A pot experiment was conducted with four cotton (Gossypium hirsutum L.) cultivars (differing in salt-sensitivity) under salinity stress. Based on observed responses in growth performance and physiological characteristics, CZ91 was the most tolerant of the four cultivars, followed by cultivars CCRI44 and CCRI49, with Z571 being much more sensitive to salt stress. To perform this tolerant response, they implement different adaptative mechanisms to cope with salt-stress. The superior salt tolerance of CZ91 was conferred by at least three complementary physiological mechanisms: its ability to regulate K + and Na + transport more effectively, its higher photochemical efficiency and better antioxidant defense capacity. However, only one or a few specific components of these defense systems play crucial roles in moderately salt tolerant CCRI44 and CCRI49. Lower ROS load in CCRI44 may be attributed to simultaneous induction of antioxidant defenses by maintaining an unusually high level of SOD, and higher activities of CAT, APX, and POD during salt stress. CCRI49 could reduce the excess generation of ROS not only by maintaining a higher selective absorption of K + over Na + in roots across the membranes through SOS1, AKT1, and HAK5, but also by displaying higher excess-energy dissipation (e.g., higher ETR, P R and qN) during salt stress. Overall, our data provide a mechanistic explanation for differential salt stress tolerance among these cultivars and shed light on the different strategies employed by cotton cultivars to minimize the ill effects of stress. Copyright © 2017. Published by Elsevier Masson SAS.

  18. Genome-wide analysis of salinity-stress induced DNA methylation alterations in cotton (Gossypium hirsutum L.) using the Me-DIP sequencing technology.

    Science.gov (United States)

    Lu, X K; Shu, N; Wang, J J; Chen, X G; Wang, D L; Wang, S; Fan, W L; Guo, X N; Guo, L X; Ye, W W

    2017-06-29

    Cytosine DNA methylation is a significant form of DNA modification closely associated with gene expression in eukaryotes, fungi, animals, and plants. Although the reference genomes of cotton (Gossypium hirsutum L.) have been publically available, the salinity-stress-induced DNA methylome alterations in cotton are not well understood. Here, we constructed a map of genome-wide DNA methylation characteristics of cotton leaves under salt stress using the methylated DNA immunoprecipitation sequencing method. The results showed that the methylation reads on chromosome 9 were most comparable with those on the other chromosomes, but the greatest changes occurred on chromosome 8 under salt stress. The DNA methylation pattern analysis indicated that a relatively higher methylation density was found in the upstream2k and downstream2k elements of the CDS region and CG-islands. Almost 94% of the reads belonged to LTR-gspsy and LTR-copia, and the number of methylation reads in LTR-gypsy was four times greater than that in LTR-copia in both control and stressed samples. The analysis of differentially methylated regions (DMRs) showed that the gene elements upstream2k, intron, and downstream2k were hypomethylated, but the CDS regions were hypermethylated. The GO (Gene Ontology) analysis suggested that the methylated genes were most enriched in cellular processes, metabolic processes, cell parts and catalytic activities, which might be closely correlated with response to NaCl stress. In this study, we completed a genomic DNA methylation profile and conducted a DMR analysis under salt stress, which provided valuable information for the better understanding of epigenetics in response to salt stress in cotton.

  19. Characterization of PROFILIN genes from allotetraploid (Gossypium hirsutum) cotton and its diploid progenitors and expression analysis in cotton genotypes differing in fiber characteristics.

    Science.gov (United States)

    Argiriou, Anagnostis; Kalivas, Apostolos; Michailidis, Georgios; Tsaftaris, Athanasios

    2012-04-01

    The actin-binding protein profilin (PRF) plays an important role in cell growth and expansion by regulating the organization of the actin filaments. Recent studies have reported association between fiber elongation in cultivated cotton (Gossypium hirsutum) and PRF expression. In the present study, we cloned four genomic clones from allotetraploid cotton (G. hirsutum) and its putative diploid progenitors (G. arboreum and G. raimondii) designated GhPRF1_A, GhPRF1_D, GaPRF1, and GrPRF1 encoding cotton PRF and characterized their genomic structure, phylogenetic relationships and promoter structure. Sequence analysis of the coding regions of all clones resulted in a single protein product which revealed more than 80% similarity to most plant PRFs and a typical organization with an actin-binding and a polybasic phospholipid binding motif at the carboxy terminus. DNA blot hybridization suggested that PRF gene is present with more than one copy in the allotetraploid species G. hirsutum. Expression analysis performed in various organs of cultivated cotton revealed that the PRF gene was preferentially expressed in cotton fibers. Very low levels of expression were observed in whole flowers, while PRF transcripts were not detected in other organs examined. Furthermore, higher levels of expression were observed at the early stages of cotton fiber development (at 10 days post anthesis), indicative that this gene may play a major role in the early stages of cotton fiber development. Quantitation of the expression by real-time PCR revealed higher expression levels in a G. hirsutum variety with higher fiber percentage compared to a variety with lower percentage. In addition, higher levels of expression were found in cultivated allotetraploid G. barbadense cotton species with higher fiber length in comparison to cultivated allotetraploid G. hirsutum.

  20. Functional characterization of GhAKT1, a novel Shaker-like K⁺ channel gene involved in K⁺ uptake from cotton (Gossypium hirsutum).

    Science.gov (United States)

    Xu, Juan; Tian, Xiaoli; Egrinya Eneji, A; Li, Zhaohu

    2014-07-15

    Shaker-like potassium (K(+)) channels in plants play an important role in K(+) absorption and transport. In this study, we characterized a Shaker-like K(+) channel gene GhAKT1 from the roots of Gossypium hirsutum cv. Liaomian17. Phylogenetic analysis showed that the GhAKT1 belongs to the AKT1-subfamily in the Shaker-like K(+) channel family. Confocal imaging of a GhAKT1-green fluorescent fusion protein (GFP) in transgenic Arabidopsis plants indicated that GhAKT1 is localized in the plasma membrane. Transcript analysis located GhAKT1 predominantly in cotton leaves with low abundance in roots, stem and shoot apex. Similarly, β-glucuronidase (GUS) activity was detected in both leaves and roots of PGhAKT1::GUS transgenic Arabidopsis plants. In roots, the GUS signals appeared in the epidermis, cortex and endodermis and root hairs, suggesting the contribution of GhAKT1 to K(+) uptake. In leaves, GhAKT1 was expressed in differentiated leaf primordial as well as mesophyll cells and veins of expanded leaves, pointing to its involvement in cell elongation and K(+) transport and distribution in leaves. Severe K(+) deficiency did not affect the expression of GhAKT1 gene. GhAKT1-overexpression in either the Arabidopsis wild-type or akt1 mutant enhanced the growth of transgenic seedlings under low K(+) deficiency and raised the net K(+) influx in roots at 100μM external K(+) concentration, within the range of operation of the high-affinity K(+) uptake system. The application of 2mM BaCl2 resulted in net K(+) efflux in roots, and eliminated the differences between GhAKT1-overexpression lines and their acceptors indicating that the K(+) uptake mediated by GhAKT1 is also as Ba(2+)-sensitive as AtAKT1. Copyright © 2014 Elsevier B.V. All rights reserved.

  1. Functional characterization of a basic helix-loop-helix (bHLH) transcription factor GhDEL65 from cotton (Gossypium hirsutum).

    Science.gov (United States)

    Shangguan, Xiao-Xia; Yang, Chang-Qing; Zhang, Xiu-Fang; Wang, Ling-Jian

    2016-10-01

    Cotton fiber is proposed to share some similarity with the Arabidopsis thaliana leaf trichome, which is regulated by the MYB-bHLH-WD40 transcription complex. Although several MYB transcription factors and WD40 family proteins in cotton have been characterized, little is known about the role of bHLH family proteins in cotton. Here, we report that GhDEL65, a bHLH protein from cotton (Gossypium hirsutum), is a functional homologue of Arabidopsis GLABRA3 (GL3) and ENHANCER OF GLABRA3 (EGL3) in regulating trichome development. Transcripts of GhDEL65 were detected in 0 ∼ 1 days post-anthesis (DPA) ovules and abundant in 3-DPA fibers, implying that GhDEL65 may act in early fiber development. Ectopic expression of GhDEL65 in Arabidopsis gl3 egl3 double mutant partly rescued the trichome development, and constitutive expression of GhDEL65 in wild-type plants led to increased trichome density on rosette leaves and stems, mainly by activating the transcription of two key positive regulators of trichome development, GLABRA1 (GL1) and GLABRA2 (GL2), and suppressed the expression of a R3 single-repeat MYB factor TRIPTYCHON (TRY). GhDEL65 could interact with cotton R2R3 MYB transcription factors GhMYB2 and GhMYB3, as well as the WD40 protein GhTTG3, suggesting that the MYB-bHLH-WD40 protein complex also exists in cotton fiber cell, though its function in cotton fiber development awaits further investigation. © 2016 Scandinavian Plant Physiology Society.

  2. Promoter isolation and characterization of GhAO-like1, a Gossypium hirsutum gene similar to multicopper oxidases that is highly expressed in reproductive organs.

    Science.gov (United States)

    Lambret-Frotté, Julia; Artico, Sinara; Muniz Nardeli, Sarah; Fonseca, Fernando; Brilhante Oliveira-Neto, Osmundo; Grossi-de-Sá, Maria Fatima; Alves-Ferreira, Marcio

    2016-01-01

    Cotton is one of the most economically important cultivated crops. It is the major source of natural fiber for the textile industry and an important target for genetic modification for both biotic stress and herbicide tolerance. Therefore, the characterization of genes and regulatory regions that might be useful for genetic transformation is indispensable. The isolation and characterization of new regulatory regions is of great importance to drive transgene expression in genetically modified crops. One of the major drawbacks in cotton production is pest damage; therefore, the most promising, cost-effective, and sustainable method for pest control is the development of genetically resistant cotton lines. Considering this scenario, our group isolated and characterized the promoter region of a MCO (multicopper oxidase) from Gossypium hirsutum, named GhAO-like1 (ascorbate oxidase-like1). The quantitative expression, together with the in vivo characterization of the promoter region reveals that GhAO-like1 has a flower- and fruit-specific expression pattern. The GUS activity is mainly observed in stamens, as expected considering that the GhAO-like1 regulatory sequence is enriched in cis elements, which have been characterized as a target of reproductive tissue specific transcription factors. Both histological and quantitative analyses in Arabidopsis thaliana have confirmed flower (mainly in stamens) and fruit expression of GhAO-like1. In the present paper, we isolated and characterized both in silico and in vivo the promoter region of the GhAO-like1 gene. The regulatory region of GhAO-like1 might be useful to confer tissue-specific expression in genetically modified plants.

  3. Field trial of insect-resistant and herbicide-tolerant genetically modified cotton (Gossypium hirsutum L.) for environmental risk assessment in Japan.

    Science.gov (United States)

    Asanuma, Yoko; Gondo, Takahiro; Ishigaki, Genki; Inoue, Koichi; Zaita, Norihiro; Muguerza, Melody; Akashi, Ryo

    2017-04-03

    Japan imports cottonseed mainly from Australia and the USA where more than 96% of all cotton varieties grown are genetically modified (GM). GM crops undergo an environmental risk assessment (ERA) under the Law Concerning the Conservation and Sustainable Use of Biological Diversity before import into Japan. Potential adverse effects on biodiversity are comprehensively assessed based on competitiveness, production of harmful substances and outcrossing ability. Even though imported cottonseed is intended for food and feed uses and not for cultivation, the potential risks from seed spillage during transport must be evaluated. In most cases, the ERA requires data collected from in-country field trials to demonstrate how the GM crop behaves in Japan's environment. Confined field trials in Japan were conducted for the ERA of Lepidoptera-resistant and glufosinate-tolerant GM cotton (Gossypium hirsutum L.) lines GHB119 and T304-40. These lines were compared with conventional varieties for growth habit, morphological characteristics, seed dormancy, and allelopathic activity associated with competitiveness and production of harmful substances. Outcrossing ability was not a concern due to the absence of sexually compatible wild relatives in Japan. Although slight statistical differences were observed between the GM line and its conventional comparator for some morphological characteristics, transgenes or transformation were not considered to be responsible for these differences. The trial demonstrated that competitiveness and production of harmful substances by these GM cotton lines were equivalent to conventional cotton varieties that have a long history of safe use, and no potential adverse effects to biosafety in Japan were observed.

  4. Les cotonniers (Gossypium hirsutum L. génétiquement modifiés, Bt : quel avenir pour la petite agriculture familiale en Afrique francophone ?

    Directory of Open Access Journals (Sweden)

    Berti F.

    2006-01-01

    Full Text Available Gnetically modifi ed cotton (Gossypium hirsutum L. Bt.: what future for small family farms in French-speaking Africa?After a massive adoption in South Africa, genetically modifi ed cultivars are at the door step of francophone Africa. In order toanticipate the impact of Bt cotton on small-scale farming we propose a simple profi t analysis of the crop based on our resultsfound in South Africa and data collected by our colleagues in Mali. Whereas the introduction of Bt cotton can be justifi ed bya threat of the appearance of the bollworm resistance to insecticides, its profi tability seems to be uncertain. The farmer profi tmargin depends on yield level linked with climatic, agricultural and environmental conditions and with the technology feewhich the farmer must be charged for. With a 210 FCFA purchase price for raw cotton, a 25 USD fee per hectare seems to bethe upper limit for which the farmer wouldnʼt be exposed to fi nancial risk. Given the recent drop of the purchase price, theexistence of a technology fee supported by the small-scale farmer is very questionable. At a more general level of the cottonsector, the success of Bt adoption rests on several keys: 1 the prevention of the Bt-toxin resistance; 2 the strengthening of thecontrol of stinging pests; 3 the updating of the seed production sector and 4 the improvement of the extension and trainingnetwork. Bt cotton must be considered as a tool which is part of the integrated crop management but not as the solution of thepoverty alleviation.

  5. Changes in activities of both photosystems and the regulatory effect of cyclic electron flow in field-grown cotton (Gossypium hirsutum L) under water deficit.

    Science.gov (United States)

    Yi, Xiao-Ping; Zhang, Ya-Li; Yao, He-Sheng; Han, Ji-Mei; Chow, Wah Soon; Fan, Da-Yong; Zhang, Wang-Feng

    2018-01-01

    To clarify the influence of water deficit on the functionality of the photosynthetic apparatus of cotton plants, leaf gas exchange, chlorophyll a fluorescence, and P700 redox state were examined in field-grown cotton Gossypium hirsutum L. cv. Xinluzao 45. In addition, we measured changes in the P515 signal and analyzed the activity of ATP synthase and the trans-thylakoid proton gradient (ΔpH). With increasing water deficit, the net CO 2 assimilation rate (A N ) and stomatal conductance (g s ) significantly decreased, but the maximum quantum efficiency of PSII photochemistry (F v /F m ) did not change. The photochemical activity of photosystem II (PSII) was reflected by the photochemical quenching coefficient (qP), quantum efficiency of photosystem II [Y(II)], and electron transport rate through PSII [ETR(II)], while the activity of photosystem I (PSI) was reflected by the quantum efficiency of photosystem I [Y(I)] and the electron transport rate through PSI [ETR(I)]. Both activities were maintained under mild water deficit, but were slightly decreased under moderate water deficit. Under moderate water deficit, cyclic electron flow (CEF), the fraction of absorbed light dissipated thermally via the ΔpH- and xanthophyll-regulated process [Y(NPQ)], and the fraction of P700 oxidized under a given set of conditions [Y(ND)] increased. Our results suggest that the activities of both photosystems are stable under mild water deficit and decrease only slightly under moderate water deficit. Moderate water deficit stimulates CEF, and the stimulation of CEF is essential for protecting PSI and PSII against photoinhibition. Copyright © 2017 Elsevier GmbH. All rights reserved.

  6. A New Synthetic Amphiploid (AADDAA) between Gossypium hirsutum and G. arboreum Lays the Foundation for Transferring Resistances to Verticillium and Drought.

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    Chen, Yu; Wang, Yingying; Zhao, Ting; Yang, Jianwei; Feng, Shouli; Nazeer, Wajad; Zhang, Tianzhen; Zhou, Baoliang

    2015-01-01

    Gossypium arboreum, a cultivated cotton species (2n = 26, AA) native to Asia, possesses invaluable characteristics unavailable in the tetraploid cultivated cotton gene pool, such as resistance to pests and diseases and tolerance to abiotic stresses. However, it is quite difficult to transfer favorable traits into Upland cotton through conventional methods due to the cross-incompatibility of G. hirsutum (2n = 52, AADD) and G. arboreum. Here, we improved an embryo rescue technique to overcome the cross-incompatibility between these two parents for transferring favorable genes from G. arboreum into G. hirsutum. Our results indicate that MSB2K supplemented with 0.5 mg l(-1) kinetin and 250 mg(-1) casein hydrolysate is an efficient initial medium for rescuing early (3 d after pollination) hybrid embryos. Eight putative hybrids were successfully obtained, which were further verified and characterized by cytology, molecular markers and morphological analysis. The putative hybrids were subsequently treated with different concentrations of colchicine solution to double their chromosomes. The results demonstrate that four putative hybrid plants were successfully chromosome-doubled by treatment with 0.1% colchicine for 24 h and become amphiploid, which were confirmed by cytological observation, self-fertilization and backcrossing. Preliminary assessments of resistance at seedling stage indicate that the synthetic amphiploid showed highly resistant to Verticillium and drought. The synthetic amphiploid between G. hirsutum × G. arboreum would lay the foundation for developing G. arboreum-introgressed lines with the uniform genetic background of G. hirsutum acc TM-1, which would greatly enhance and simplify the mining, isolation, characterization, cloning and use of G. arboreum-specific desirable genes in future cotton breeding programs.

  7. Período crítico de competição entre comunidades de plantas daninhas e o algodoeiro (Gossypium hirsutum L. no Estado de Minas Gerais The critical period of competition between weed communities and cotton (Gossypium hirsutum L. in the State of Minas Gerais

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    J. P. del C. Laca-Buendia

    1979-12-01

    Full Text Available Foram instalados nove ensaios no período de 1973 a 1976 em solos LVA, LE e LR de três localidades do Triângulo e duas no Norte do Estado de Minas Gerais, Brasil, a fim de se estudar as épocas críticas de competição de plantas daninhas com o algodoeiro (Gossypium hirsutum L.. Os tratamentos foram: capinas até 2, 4, 6, 8 primeiras semanas e durante todo o ciclo; e capinas após 2, 4, 6, 8 primeiras semanas e todo o ciclo sem capinas. Os resultados mostraram que a competição das plantas daninhas, quando não controladas, com a cultura, provocou 90,22% de perda na produção no Triângulo Mineiro e 70,73% no Norte de Minas. Em relação à testemunha, mantida livre de competição durante todo o ciclo, o melhor rendimento foi obtido quando se manteve a cultura livre de competição durante seis: emanas após a emergência, no Triâgulo Mineiro, e durante oito semanas, no Norte de Minas. Não houve, entretanto, diferença significativa entre os tratamentos com 4, 6, 8 semanas e também com todo o ciclo sem competição, tanto no Triângulo quanto no Norte do Estado.Nine tests were made from 1973 up to 1976 on different soil types in five localities (three in the Triângulo Mineiro and two in the Northern Region of Minas Gerais State, Brazil to Study the critical periods of weed competition with cotton (Gossypium hirsutum L.. The treatments consisted of: weed free during the first 2, 4, 6, 8 weeks and all the cycle; and competition during the first 2, 4, 6, 8 weeks and all the cycle. The results showed yield losses of 90,22% in the Triângulo Mineiro and 70,73% in the Northern Region when weed were always present. Compared to the check free of weeds during all the cycle, the best yield was obtained when cotton was kept free of weeds during the first six weeks after emergence in the Triângulo Mineiro as well as during the first eight weeks in the Northern Region. However, there was no difference among the treatments consisting of 4, 6, 8

  8. Propriedades físicas e sensoriais da carne de cordeiros Santa Inês terminados em dietas com diferentes níveis de caroço de algodão integral (Gossypium hirsutum Physical and sensorial properties of Santa Ines lamb meat terminated in diets with increasing levels of whole cotton seed (Gossypium hirsutum

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    Thereza Raquel de Lucena Vieira

    2010-06-01

    Full Text Available Esta pesquisa teve como objetivo avaliar o efeito de dietas de terminação contendo diferentes níveis (0, 20, 30 e 40% de caroço de algodão integral (Gossypium hirsutum sobre os parâmetros físicos e sensoriais da carne de vinte e quatro cordeiros da raça Santa Inês. Foram avaliados os parâmetros de pH, capacidade de retenção de água (CRA, perda de peso por cocção (PPC, textura e cor, além dos parâmetros sensoriais de sabor, aroma, cor e textura. Apenas o parâmetro cor da carne ovina sofreu influência significativa da adição do caroço de algodão integral, observando-se variações para as coordenadas b* e L* (antes da cocção. Verificou-se também que os tratamentos apresentaram influência (p The objective of this research was to evaluate the effect of termination diets containing increasing levels (0, 20, 30, and 40% of whole cotton seed (Gossypium hirsutum on the physical (pH, water holding capacity, cooking losses, texture, colour and sensory parameters (flavour, odour, colour, texture of the lamb meat of twenty four Santa Ines sheep. Only the b* and L* colour parameters of the lamb meat were significantly affected by the addition of different levels of whole cotton seed to the diet. The inclusion of the whole cotton seed in the diet of the Santa Ines sheep also influenced sensory attributes such as natural colour, odour, and characteristic flavour. Based on these observations, considering the physical and sensory attributes of the lamb meat, the use of whole cotton seed at a 40% level for sheep in termination for short periods, i.e., up to 90 days, is recommended.

  9. In situ and genetic characterization of Gossypium barbadense populations from the states of Pará and Amapá, Brazil Caracterização in situ e genética de Gossypium barbadense dos Estados do Pará e do Amapá

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    Vanessa Cavalcante de Almeida

    2009-07-01

    Full Text Available The objective of this work was to characterize the populations of Gossypium barbadense in the states of Amapá and Pará, Brazil. In situ characterization was conducted through interviews with the owners of the plants and environmental observations. Leaf or petal tissue as well as seed samples were collected for genetic characterization by single sequence repeats markers and for storage in germplasm banks, respectively. The plants were maintained in dooryards and used mainly for medical purposes. The genetic analysis showed no heterozygous plants at the loci tested (f = 1, indicating that reproduction occurs mainly through selfing. The total genetic diversity was high (He = 0.39; and a high level of differentiation was observed between cotton plants from the two states (F ST = 0.36. Conventional methods of in situ maintenance of G. barbadense populations are not applicable. The conservation of the genetic variability of populations present in the two states could be achieved through germplasm collection and establishing of ex situ seed banks.O objetivo deste trabalho foi caracterizar populações de Gossypium barbadense dos estados do Amapá e Pará. A caracterização in situ foi conduzida por meio de entrevistas com os proprietários das plantas e por observações sobre o ambiente. Tecidos de folhas ou de pétalas, além de sementes, foram coletados para a caracterização genética com marcadores SSR ("single sequence repeats" e para o armazenamento em bancos de germoplasma, respectivamente. As plantas eram mantidas em fundos de quintal e usadas, principalmente, para fins medicinais. As análises genéticas não mostraram plantas heterozigotas nos locos testados (f = 1, o que indica que a reprodução ocorre principalmente por meio de autofecundação. A diversidade genética total foi alta (He = 0,39, e um alto nível de diferenciação foi observado entre as plantas de algodoeiro dos dois estados (F ST = 0,36. Métodos convencionais para a

  10. Desfolha, população de plantas e precocidade do milho afetam a incidência e a severidade de podridões de colmo Defoliation, plant population, and earliness of maize affect the incidence and severity of stalk rots

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    Luiz Eduardo Bassay Blum

    2003-10-01

    Full Text Available As relações entre fonte e dreno interferem sobre a ocorrência de podridões de colmo na cultura do milho (Zea mays. O estudo foi conduzido em Lages, SC, para avaliar o efeito da desfolha, população de plantas e híbridos sobre as podridões do colmo do milho. O delineamento experimental foi de blocos ao acaso com parcelas sub-subdivididas e três repetições. Os híbridos P32R21 (superprecoce, Premium (precoce e C333B (tardio foram testados sem desfolha e com 50% de desfolha no estágio de espigamento nas populações de 25.000, 50.000, 75.000 e 100.000 plantas ha-1. Avaliaram-se a incidência e a severidade das podridões do colmo causadas por Colletotrichum graminicola, Diplodia maydis e Fusarium moniliforme. O híbrido P32R21 foi o mais afetado pelos fungos causadores de podridões. Nos híbridos P32R21 e Premium, as plantas desfolhadas foram mais severamente infectadas pelos patógenos do que as intactas. O aumento da população de plantas aumentou a intensidade (incidência ou severidade de podridões de colmo nas plantas intactas e diminuiu a ocorrência nas desfolhadas.The relationship between source and sink interferes on maize (Zea mays stalk rot occurrence. This study was conducted in Lages, SC, Brazil, to evaluate the effect of defoliation, plant population, and hybrids on the intensity (incidence or severity of maize stalk rots. The experiment was set in a randomized complete block design (three replications with a split-split-plot arrangement. The hybrids P32R21 (very early, Premium (early and C333B (late were tested without defoliation and with 50% defoliation on ear formation stage at plant populations of 25,000, 50,000, 75,000, and 100,000 plants ha-1. The incidence and severity of Colletotrichum graminicola, Diplodia maydis and Fusarium moniliforme stalk rots were evaluated. The hybrid P32R21 was the most affected by stalk rots. Defoliation enhanced rots on P32R21 and Premium. Enhancements in plant population increased

  11. Distribuição horizontal e taxas de crescimento, senescência e desfolhação de azevém perene e festuca, puros e em associação Horizontal distribution and growth, senescence and defoliation fluxes of perennial ryegrass and tall fescue pure and mixed swards

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    Andréa Machado Groff

    2002-09-01

    Full Text Available O experimento foi realizado no INRA (Institut National de la Recherche Agronomique em Theix, França. Duas gramíneas (azevém perene e festucaforam semeadas em caixas (0,13 m² usando-se três distribuições horizontais do pasto (pura, linhas alternadas e faixas alternadas e três intervalos de desfolhações (3,5, 7 e 14 dias, com quatro repetições por tratamento. Quatro meses após a semeadura, a cada data de desfolhação, as caixas foram oferecidas, individualmente, a quatro ovelhas secas e retiradas após a realização de 340 bocados.m-2. Para cada gramínea estudaram-se a densidade populacional e a massa de perfilhos, a altura e a produção de matéria seca, a profundidade e a massa do bocado e as taxas de crescimento, senescência e desfolhação. A maior altura do pasto, gerada por desfolhações menos freqüentes, promoveu a realização de bocados mais profundos e de maior massa. Por outro lado, em desfolhações mais freqüentes a altura do pasto foi mantida mais baixa, e a profundidade e massa do bocado foram menores. A distribuição horizontal das plantas promoveu respostas diferenciadas em relação as taxas de crescimento, senescência e desfolhação. Quando em linhas alternadas a festuca teve a taxa de crescimento limitada, provavelmente desfavorecida pela competição.The experiment was carried in INRA (Institut National de la Recherche Agronomique at Theix, France. Two grasses (perennial ryegrass and tall fescue were grown in sward boxes (0,13 m², using three different sward horizontal distribution (pure, alternate rows and alternate strips and three defoliation intervals (3,5, 7 and 14 days between two successive defoliation with four replications. Four months after sowing, at defoliation date, sward boxes were offered to four individual dry ewes and removed after 340 bites.m-2 had been taken. For each grass species, the population density and the tiller mass, sward height, herbage production, bite depth and bite mass

  12. Characterization of expressed sequence tags from developing fibers of Gossypium barbadense and evaluation of insertion-deletion variation in tetraploid cultivated cotton species.

    Science.gov (United States)

    Lv, Yuanda; Zhao, Liang; Xu, Xiaoyang; Wang, Lei; Wang, Cheng; Zhang, Tianzhen; Guo, Wangzhen

    2013-03-13

    Cotton is the leading fiber crop worldwide. Gossypium barbadense is an important species of cotton because of its extra-long staple fibers with superior luster and silkiness. However, a systematic analysis and utilization of cDNA sequences from G. barbadense fiber development remains understudied. A total of 21,079 high quality sequences were generated from two non-normalized cDNA libraries prepared by using a mixture of G. barbadense Hai7124 fibers and ovules. After assembly processing, a set of 8,653 unigenes were obtained. Of those, 7,786 were matched to known proteins and 7,316 were assigned to functional categories. The molecular functions of these unigenes were mostly related to binding and catalytic activity, and carbohydrate, amino acid, and energy metabolisms were major contributors among the subsets of metabolism. Sequences comparison between G. barbadense and G. hirsutum revealed that 8,245 unigenes from G. barbadense were detected the similarity with those released publicly in G. hirsutum, however, the remaining 408 sequences had no hits against G. hirsutum unigenes database. Furthermore, 13,275 putative ESTs InDels loci involved in the orthologous and/or homoeologous differences between/within G. barbadense and G. hirsutum were discovered by in silico analyses, and 2,160 InDel markers were developed by ESTs with more than five insertions or deletions. By gel electrophoresis combined with sequencing verification, 71.11% candidate InDel loci were reconfirmed orthologous and/or homoeologous loci polymorphisms using G. hirsutum acc TM-1 and G. barbadense cv Hai7124. Blastx result showed among 2,160 InDel loci, 81 with significant function similarity with known genes associated with secondary wall synthesis process, indicating the important roles in fiber quality in tetraploid cultivated cotton species. Sequence comparisons and InDel markers development will lay the groundwork for promoting the identification of genes related to superior agronomic traits

  13. Analysis of root-knot nematode and fusarium wilt disease resistance in cotton (Gossypium spp.) using chromosome substitution lines from two alien species.

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    Ulloa, M; Wang, C; Saha, S; Hutmacher, R B; Stelly, D M; Jenkins, J N; Burke, J; Roberts, P A

    2016-04-01

    Chromosome substitution (CS) lines in plants are a powerful genetic resource for analyzing the contribution of chromosome segments to phenotypic variance. In this study, a series of interspecific cotton (Gossypium spp.) CS lines were used to identify a new germplasm resource, and to validate chromosomal regions and favorable alleles associated with nematode or fungal disease resistance traits. The CS lines were developed in the G. hirsutum L. TM-1 background with chromosome or chromosome segment substitutions from G. barbadense L. Pima 3-79 or G. tomentosum. Root-knot nematode (Meloidogyne incognita) and fusarium wilt (Fusarium oxysporum f. sp. vasinfectum) (races 1 and 4) resistance alleles and quantitative trait loci (QTL) previously placed on cotton chromosomes using SSR markers in two interspecific recombinant inbred line populations were chosen for testing. Phenotypic responses of increased resistance or susceptibility in controlled inoculation and infested field assays confirmed the resistance QTLs, based on substitution with the positive or negative allele for resistance. Lines CS-B22Lo, CS-B04, and CS-B18 showed high resistance to nematode root-galling, confirming QTLs on chromosomes 4 and 22 (long arm) with resistance alleles from Pima 3-79. Line CS-B16 had less fusarium race 1-induced vascular root staining and higher percent survival than the TM-1 parent, confirming a major resistance QTL on chromosome 16. Lines CS-B(17-11) and CS-B17 had high fusarium race 4 vascular symptoms and low survival due to susceptible alleles introgressed from Pima 3-79, confirming the localization on chromosome 17 of an identified QTL with resistance alleles from TM1 and other resistant lines. Analyses validated regions on chromosomes 11, 16, and 17 harboring nematode and fusarium wilt resistance genes and demonstrated the value of CS lines as both a germplasm resource for breeding programs and as a powerful genetic analysis tool for determining QTL effects for disease

  14. Comparative fiber property and transcriptome analyses reveal key genes potentially related to high fiber strength in cotton (Gossypium hirsutum L.) line MD52ne.

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    Islam, Md S; Fang, David D; Thyssen, Gregory N; Delhom, Chris D; Liu, Yongliang; Kim, Hee Jin

    2016-02-01

    Individual fiber strength is an important quality attribute that greatly influences the strength of the yarn spun from cotton fibers. Fiber strength is usually measured from bundles of fibers due to the difficulty of reliably measuring strength from individual cotton fibers. However, bundle fiber strength (BFS) is not always correlated with yarn strength since it is affected by multiple fiber properties involved in fiber-to-fiber interactions within a bundle in addition to the individual fiber strength. Molecular mechanisms responsible for regulating individual fiber strength remain unknown. Gossypium hirsutum near isogenic lines (NILs), MD52ne and MD90ne showing variations in BFS provide an opportunity for dissecting the regulatory mechanisms involved in individual fiber strength. Comprehensive fiber property analyses of the NILs revealed that the superior bundle strength of MD52ne fibers resulted from high individual fiber strength with minor contributions from greater fiber length. Comparative transcriptome analyses of the NILs showed that the superior bundle strength of MD52ne fibers was potentially related to two signaling pathways: one is ethylene and the interconnected phytohormonal pathways that are involved in cotton fiber elongation, and the other is receptor-like kinases (RLKs) signaling pathways that are involved in maintaining cell wall integrity. Multiple RLKs were differentially expressed in MD52ne fibers and localized in genomic regions encompassing the strength quantitative trait loci (QTLs). Several candidate genes involved in crystalline cellulose assembly were also up-regulated in MD52ne fibers while the secondary cell wall was produced. Comparative phenotypic and transcriptomic analyses revealed differential expressions of the genes involved in crystalline cellulose assembly, ethylene and RLK signaling pathways between the MD52ne and MD90ne developing fibers. Ethylene and its phytohormonal network might promote the elongation of MD52ne fibers

  15. Mapping by sequencing in cotton (Gossypium hirsutum) line MD52ne identified candidate genes for fiber strength and its related quality attributes.

    Science.gov (United States)

    Islam, Md S; Zeng, Linghe; Thyssen, Gregory N; Delhom, Christopher D; Kim, Hee Jin; Li, Ping; Fang, David D

    2016-06-01

    Three QTL regions controlling three fiber quality traits were validated and further fine-mapped with 27 new single nucleotide polymorphism (SNP) markers. Transcriptome analysis suggests that receptor-like kinases found within the validated QTLs are potential candidate genes responsible for superior fiber strength in cotton line MD52ne. Fiber strength, length, maturity and fineness determine the market value of cotton fibers and the quality of spun yarn. Cotton fiber strength has been recognized as a critical quality attribute in the modern textile industry. Fine mapping along with quantitative trait loci (QTL) validation and candidate gene prediction can uncover the genetic and molecular basis of fiber quality traits. Four previously-identified QTLs (qFBS-c3, qSFI-c14, qUHML-c14 and qUHML-c24) related to fiber bundle strength, short fiber index and fiber length, respectively, were validated using an F3 population that originated from a cross of MD90ne × MD52ne. A group of 27 new SNP markers generated from mapping-by-sequencing (MBS) were placed in QTL regions to improve and validate earlier maps. Our refined QTL regions spanned 4.4, 1.8 and 3.7 Mb of physical distance in the Gossypium raimondii reference genome. We performed RNA sequencing (RNA-seq) of 15 and 20 days post-anthesis fiber cells from MD52ne and MD90ne and aligned reads to the G. raimondii genome. The QTL regions contained 21 significantly differentially expressed genes (DEGs) between the two near-isogenic parental lines. SNPs that result in non-synonymous substitutions to amino acid sequences of annotated genes were identified within these DEGs, and mapped. Taken together, transcriptome and amino acid mutation analysis indicate that receptor-like kinase pathway genes are likely candidates for superior fiber strength and length in MD52ne. MBS along with RNA-seq demonstrated a powerful strategy to elucidate candidate genes for the QTLs that control complex traits in a complex genome like tetraploid

  16. EFEITO DO EXTRATO FOLIAR DE Gossypium arboreum L. (ALGODÃO SOB O CRESCIMENTO MICELIAL DE Lasiodiplodia theobromae (PAT. GRIFFON & MAUBL

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    Caroline da Cruz Vasconcelos

    2017-03-01

    Full Text Available O uso de extratos vegetais tem sido amplamente estudado como controle biológico alternativo de doenças de plantas, especialmente aquelas causadas por fungos patogênicos. Nesse sentido, o objetivo do presente estudo foi avaliar a atividade antifúngica in vitro do extrato bruto etanólico obtido de folhas de algodão (Gossypium arboreum L., Malvaceae em diferentes concentrações sob o desenvolvimento micelial do fungo fitopatogênico Lasiodiplodia theobromae. O ensaio foi conduzido nos Laboratórios de Microbiologia/Fitopatologia/Genética e de Cultivo/Isolamento da Universidade do Estado do Amapá/UEAP, em Macapá, Amapá. Em um Delineamento Inteiramente Casualizado (DIC, seis tratamentos e seis repetições foram organizados: T1 (controle negativo – BDA (Batata-Dextrose-Ágar + 0 mg.mL-1 (extrato foliar; T2 - BDA + 5 mg.mL-1 (extrato foliar; T3 - BDA + 10 mg.mL-1 (extrato foliar; T4 - BDA + 20 mg.mL-1 (extrato foliar; T5 - BDA + 2,5 mL de etanol e T6 (controle positivo - BDA + 2,5 mL de fungicida comercial (Derosal®. As variáveis inibição do crescimento micelial (ICM, índice de velocidade de crescimento micelial (IVCM e área abaixo da curva de cobertura de crescimento micelial (AACCM foram calculadas ao final do experimento. Os resultados mostraram que o extrato bruto etanólico das folhas de G. arboreum não apresentou atividade antifúngica in vitro frente ao fungo L. theobromae nas concentrações testadas. O extrato induziu o crescimento micelial do fungo, especialmente na concentração 10 mg.mL-1, a qual apresentou condição ideal para o desenvolvimento das estruturas do fungo. Palavras-chave: Malvaceae, extrato vegetal, controle biológico, fitopatógeno.

  17. A combined functional and structural genomics approach identified an EST-SSR marker with complete linkage to the Ligon lintless-2 genetic locus in cotton (Gossypium hirsutum L.

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    Tang Yuhong

    2011-09-01

    Full Text Available Abstract Background Cotton fiber length is an important quality attribute to the textile industry and longer fibers can be more efficiently spun into yarns to produce superior fabrics. There is typically a negative correlation between yield and fiber quality traits such as length. An understanding of the regulatory mechanisms controlling fiber length can potentially provide a valuable tool for cotton breeders to improve fiber length while maintaining high yields. The cotton (Gossypium hirsutum L. fiber mutation Ligon lintless-2 is controlled by a single dominant gene (Li2 that results in significantly shorter fibers than a wild-type. In a near-isogenic state with a wild-type cotton line, Li2 is a model system with which to study fiber elongation. Results Two near-isogenic lines of Ligon lintless-2 (Li2 cotton, one mutant and one wild-type, were developed through five generations of backcrosses (BC5. An F2 population was developed from a cross between the two Li2 near-isogenic lines and used to develop a linkage map of the Li2 locus on chromosome 18. Five simple sequence repeat (SSR markers were closely mapped around the Li2 locus region with two of the markers flanking the Li2 locus at 0.87 and 0.52 centimorgan. No apparent differences in fiber initiation and early fiber elongation were observed between the mutant ovules and the wild-type ones. Gene expression profiling using microarrays suggested roles of reactive oxygen species (ROS homeostasis and cytokinin regulation in the Li2 mutant phenotype. Microarray gene expression data led to successful identification of an EST-SSR marker (NAU3991 that displayed complete linkage to the Li2 locus. Conclusions In the field of cotton genomics, we report the first successful conversion of gene expression data into an SSR marker that is associated with a genomic region harboring a gene responsible for a fiber trait. The EST-derived SSR marker NAU3991 displayed complete linkage to the Li2 locus on

  18. Identification of Multiple Stress Responsive Genes by Sequencing a Normalized cDNA Library from Sea-Land Cotton (Gossypium barbadense L..

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    Bin Zhou

    Full Text Available Plants often face multiple stresses including drought, extreme temperature, salinity, nutrition deficiency and biotic stresses during growth and development. All the stresses result in a series of physiological and metabolic reactions and then generate reversible inhibition of metabolism and growth and can cause seriously irreversible damage, even death. At each stage of cotton growth, environmental stress conditions pose devastating threats to plant growth and development, especially yield and quality. Due to the complex stress conditions and unclear molecular mechanisms of stress response, there is an urgent need to explore the mechanisms of cotton response against abiotic stresses.A normalized cDNA library was constructed using Gossypium barbadense Hai-7124 treated with different stress conditions (heat, cold, salt, drought, potassium and phosphorus deficit and Verticillium dahliae infection. Random sequencing of this library generated 6,047 high-quality expressed sequence tags (ESTs. The ESTs were clustered and assembled into 3,135 uniESTs, composed of 2,497 contigs and 638 singletons. The blastx results demonstrated 2,746 unigenes showing significant similarity to known genes, 74 uniESTs displaying significant similarity to genes of predicted proteins, and 315 uniESTs remain uncharacterized. Functional classification unveiled the abundance of uniESTs in binding, catalytic activity, and structural molecule activity. Annotations of the uniESTs by the plant transcription factor database (PlantTFDB and Plant Stress Protein Database (PSPDB disclosed that transcription factors and stress-related genes were enriched in the current library. The expression of some transcription factors and specific stress-related genes were verified by RT-PCR under various stress conditions.Annotation results showed that a huge number of genes respond to stress in our study, such as MYB-related, C2H2, FAR1, bHLH, bZIP, MADS, and mTERF. These results will improve our

  19. Generation and analysis of a large-scale expressed sequence Tag database from a full-length enriched cDNA library of developing leaves of Gossypium hirsutum L.

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    Min Lin

    Full Text Available BACKGROUND: Cotton (Gossypium hirsutum L. is one of the world's most economically-important crops. However, its entire genome has not been sequenced, and limited resources are available in GenBank for understanding the molecular mechanisms underlying leaf development and senescence. METHODOLOGY/PRINCIPAL FINDINGS: In this study, 9,874 high-quality ESTs were generated from a normalized, full-length cDNA library derived from pooled RNA isolated from throughout leaf development during the plant blooming stage. After clustering and assembly of these ESTs, 5,191 unique sequences, representative 1,652 contigs and 3,539 singletons, were obtained. The average unique sequence length was 682 bp. Annotation of these unique sequences revealed that 84.4% showed significant homology to sequences in the NCBI non-redundant protein database, and 57.3% had significant hits to known proteins in the Swiss-Prot database. Comparative analysis indicated that our library added 2,400 ESTs and 991 unique sequences to those known for cotton. The unigenes were functionally characterized by gene ontology annotation. We identified 1,339 and 200 unigenes as potential leaf senescence-related genes and transcription factors, respectively. Moreover, nine genes related to leaf senescence and eleven MYB transcription factors were randomly selected for quantitative real-time PCR (qRT-PCR, which revealed that these genes were regulated differentially during senescence. The qRT-PCR for three GhYLSs revealed that these genes express express preferentially in senescent leaves. CONCLUSIONS/SIGNIFICANCE: These EST resources will provide valuable sequence information for gene expression profiling analyses and functional genomics studies to elucidate their roles, as well as for studying the mechanisms of leaf development and senescence in cotton and discovering candidate genes related to important agronomic traits of cotton. These data will also facilitate future whole-genome sequence

  20. Composição químico-bromatológica, digestibilidade e degradação in situ da dieta de ovinos em capim-tanzânia sob três frequências de desfolhação Chemical composition, digestibility and in situ degradation of sheep diet on Tanzania grass with three defoliation frequencies

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    Bruno Stefano Miranda Valente

    2010-01-01

    Full Text Available Objetivou-se avaliar a composição químico-bromatológica, a digestibilidade e a degradação in situ da matéria seca da dieta consumida por ovinos em pastagem de Panicum maximum cv. tanzânia sob três frequências de desfolhação, determinadas pela interceptação da radiação fotossinteticamente ativa (IRFA de 85, 95 e 97% no 1º e 4º dias de pastejo. O delineamento experimental foi inteiramente casualizado com arranjo fatorial 3 × 2 (três frequências de desfolhação e dois dias de pastejo, com quatro repetições (piquetes por tratamento. Para determinação da composição químico-bromatológica e da digestibilidade e ensaio de cinética de degradação da matéria seca da dieta, foi realizada uma simulação de pastejo no 1º e 4º dias de ocupação. A diminuição da frequência de desfolhação piorou a composição químico-bromatológica, a digestibilidade e a degradação do capim-tanzânia. Recomenda-se frequência de desfolhação no capim-tanzânia menor ou igual a 95% de interceptação da radiação fotossinteticamente ativa visando à manutenção da qualidade do pasto.The objective of this study was to evaluate the chemical composition, digestibility and in situ degradation of dry matter of the diet consumed by sheep grazing on Panicum maximum cv. Tanzania under three defoliation frequencies, determined by the interception of the photosynthetically active radiation in the canopy (PAR of 85, 95 and 97% on the first and fourth days of the grazing period. A randomized complete design in a 3 × 2 factorial arrangement (three defoliation frequencies and two days grazing, with four replications (poles. To determine the chemical composition, digestibility and an in situ dry matter degradation trial, a grazing simulation was carried out on the 1st and 4th days. Reduced defoliation frequency decreased the chemical composition, digestibility and in situ degradation of the diet. Thus defoliation frequency of tanzania grass is

  1. Identification of stable quantitative trait loci (QTLs) for fiber quality traits across multiple environments in Gossypium hirsutum recombinant inbred line population.

    Science.gov (United States)

    Jamshed, Muhammad; Jia, Fei; Gong, Juwu; Palanga, Koffi Kibalou; Shi, Yuzhen; Li, Junwen; Shang, Haihong; Liu, Aiying; Chen, Tingting; Zhang, Zhen; Cai, Juan; Ge, Qun; Liu, Zhi; Lu, Quanwei; Deng, Xiaoying; Tan, Yunna; Or Rashid, Harun; Sarfraz, Zareen; Hassan, Murtaza; Gong, Wankui; Yuan, Youlu

    2016-03-08

    The identification of quantitative trait loci (QTLs) that are stable and consistent across multiple environments and populations plays an essential role in marker-assisted selection (MAS). In the present study, we used 28,861 simple sequence repeat (SSR) markers, which included 12,560 Gossypium raimondii (D genome) sequence-based SSR markers to identify polymorphism between two upland cotton strains 0-153 and sGK9708. A total of 851 polymorphic primers were finally selected and used to genotype 196 recombinant inbred lines (RIL) derived from a cross between 0 and 153 and sGK9708 and used to construct a linkage map. The RIL population was evaluated for fiber quality traits in six locations in China for five years. Stable QTLs identified in this intraspecific cross could be used in future cotton breeding program and with fewer obstacles. The map covered a distance of 4,110 cM, which represents about 93.2 % of the upland cotton genome, and with an average distance of 5.2 cM between adjacent markers. We identified 165 QTLs for fiber quality traits, of which 47 QTLs were determined to be stable across multiple environments. Most of these QTLs aggregated into clusters with two or more traits. A total of 30 QTL clusters were identified which consisted of 103 QTLs. Sixteen clusters in the At sub-genome comprised 44 QTLs, whereas 14 clusters in the Dt sub-genome that included 59 QTLs for fiber quality were identified. Four chromosomes, including chromosome 4 (c4), c7, c14, and c25 were rich in clusters harboring 5, 4, 5, and 6 clusters respectively. A meta-analysis was performed using Biomercator V4.2 to integrate QTLs from 11 environmental datasets on the RIL populations of the above mentioned parents and previous QTL reports. Among the 165 identified QTLs, 90 were identified as common QTLs, whereas the remaining 75 QTLs were determined to be novel QTLs. The broad sense heritability estimates of fiber quality traits were high for fiber length (0.93), fiber strength (0

  2. Características morfogênicas e estruturais e produção de forragem do capim-marandu submetido a intensidades e freqüências de desfolhação Morphogenetic and structural traits and herbage production of marandugrass under intensities and frequencies of defoliation

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    Kênia Régia Anasenko Marcelino

    2006-12-01

    ção de forragem com grande quantidade de folhas e menor quantidade de pseudocolmo e material morto, condicionando melhor eficiência na produção de forragem.This trial was carried out to evaluate the influence of defoliation intensities (10 and 20 cm stubble height and defoliation frequencies (three cut intervals based on the appearance of 5, 7 and 9 leaves/tiller after each defoliation event on the morphogenetic and structural traits, tillering and herbage production of Brachiaria brizantha cv Marandu swards. Treatments were allocated to experimental units according to a completely randomized design, in a 2 x 3 factorial arrangement, with three replications, in a total of 18 experimental units. Two cuts were performed in the most frequent treatment and one cut for the remaining treatments. Greater defoliation intensity resulted in greater leaf tissue turn over and, when combined to greater defoliation frequencies resulted in younger tillers, which grew up in an environment with lesser light competition. Cutting intensity at 20 cm favored tiller transition from vegetative to reproductive stage, resulting in greater contribution of pseudo stem and dead material to the herbage mass. If frequent defoliation is used, the 10 cm stubble height is the recommended intensity. If less frequent defoliation is used, the 10 cm stubble height may decrease herbage yield, mainly when using the seven leaves frequency. Greater defoliation frequencies showed greater sward renovation, with greater leaf elongation and leaf appearance rates, greater leaf blade length and lesser pseudo-stem accumulation and elongation. Although greater herbage production was obtained at the 20 cm cutting height and 7 leaves frequency, considering all evaluated traits, more frequent cuts promoted greater tissue turn over with high herbage production characterized by its high amount of leaves and less amount of pseudo stem and dead material, allowing for higher herbage production efficiency.

  3. Morphogenic and structural characteristics of guinea grass pastures submitted to three frequencies and two defoliation severities Características morfogênicas e estruturais de pastos de capim-tanzânia submetidos a três frequências e duas severidades de desfolhação

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    Rodrigo Amorim Barbosa

    2011-05-01

    Full Text Available It was evaluated the morphogenic and structural characteristics of guinea grass under rotational at three grazing intervals and two defoliation intensities. Grazing intervals corresponded to the time needed by the forage canopy to reach 90, 95 or 100% of incident light interception during regrowth and they were evaluated combined to two defoliation severities (post-grazing conditions, 25 and 50 cm of height, being allocated to experimental units according to a complete randomized design, with three replicates and 3 × 2 factorial arrangement. The experiment was conducted from July 2003 to May 2004. For evaluation of morphogenetic and structural characteristics, ten tillers per experimental unit were selected. Morphogenetic and structural characteristics were strongly influenced by seasons of the year inasmuch as leaf elongation rate increased 3.5 fold from winter to summer. In addition to year season effect, there was also an effect of defoliation frequencies on tiller population density, which was greater in the defoliation period corresponding to 90% of light interception, especially if evaluated in relation to the interval corresponding to 100% of light interception. Defoliation frequency is determinant in expression of phenotypic plasticit, acting on the control of stem elongation.Foram avaliadas as características morfogênicas e estruturais do capim-tanzânia sob lotação rotativa em três intervalos de pastejo e duas severidades de desfolhação. Os intervalos de pastejo corresponderam aos tempos necessários para que o dossel forrageiro atingisse 90, 95 ou 100% de interceptação da luz incidente, durante a rebrotação e foram avaliados em combinação a duas severidades de desfolhação (condições pós-pastejo, 25 e 50 cm de altura, sendo alocados às unidades experimentais segundo um delineamento de blocos completos casualizados, com três repetições e arranjo fatorial 3 × 2. O experimento foi realizado de julho de 2003 a maio

  4. Mortality of the outbreak defoliator Ormiscodes amphimone (Lepidoptera: Saturniidae caused by natural enemies in northwestern Patagonia, Argentina Mortalidad del defoliador epidémico Ormiscodes amphimone (Lepidoptera: Saturniidae causada por enemigos naturales en el noroeste de la Patagonia Argentina

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    JUAN PARITSIS

    2012-03-01

    Full Text Available Outbreaks of the defoliator moth Ormiscodes amphimone are occurring more frequently in numerous Nothofagus forests of Patagonia. However, little is known about the life history of this species including its natural enemies as mortality agents. In this work we quantified mortality by parasitoids and generalist predators at the egg, larval and pupal life stages of O. amphimone in a Nothofagus pumilio (Poepp. & Endl. Krasser forest in northwestern Patagonia. Parasitism of eggs was relatively low (ca. 11 %, and we did not record significant larval predation by insectivorous birds. However, we recorded elevated mortality caused by larval parasitoids (ca. 50 % in third instar larvae and pupal predators (ca. 75 %, which suggests that these natural enemies could play a significant role in regulating O. amphimone populations. Our research is an initial step towards understanding the influence of natural enemies on O. amphimone population dynamics.Las irrupciones poblacionales de la polilla defoliadora Ormiscodes amphimone están ocurriendo de manera más frecuente en numerosos bosques de Nothofagus de la Patagonia. Sin embargo, se sabe poco de la historia natural de esta especie y, particularmente, de sus enemigos naturales. En este estudio se cuantificó la depredación de huevos, larvas y pupas de O. amphimone por parasitoides y otros depredadores en un bosque de Nothofagus pumilio (Poepp. & Endl. Krasser en el noroeste de la Patagonia. Se encontró que el parasitismo de huevos fue relativamente bajo (ca. 11 % y no se registró depredación significativa de larvas por aves insectívoras. No obstante, registramos niveles elevados de mortalidad causada por parasitoides de larvas (ca. 50 % en larvas en tercer instar y por depredadores de pupas (ca. 75 %, lo que parece indicar que estos enemigos naturales desempeñan un papel significativo en la regulación de poblaciones de O. amphimone. Este estudio representa un paso inicial hacia el entendimiento de la

  5. Competição de misturas de herbicidas nas principais regiões algodoeiras (Gossypium hirsutum L. no E. de Minas Gerais

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    J.P. del C. Laca-Buendia

    1978-09-01

    região foi encontrado efeito negativo da aplicação dos herbicidas.Several herbicide mixtures were tested on cotton, (Gossypium hirsutum L. in the main production areas of the State of Minas Gerais, Brasil. The cultivar "Minas Dona Beta", was used in the Metalúrgica region, whilst in Triângulo and Norte the cultivar employed was ."IAC-13-1", . In Triângulo litle regrowth occurred up to 30 days after application when the following mixtures were used: dinitramine + diuron, dinitroanilin + prometryne and pendimethalin + diuron. These treatments controlled 96.2%, 92.5% and 96.5% of the total weeds, respectively. When yields were compared, 1,962 Kg/ha were obtained in the best treatment (pendimethalin + diuron, against the control plots average of 1,130 Kg/ha. Tank mixtures of 2,00 Kg/ha of alachlor and 0.35 Kg/ha of metribuzin, or 3,00 Kg/ha of alachlor and 0,50 Kg/ha of metribuzin, and 1,00 Kg/ha of trifluralin and 0,50 Kg/ha of metribuzin were the most efficient in controlling grasses and dicotyledons. Effective weed control was recorded in Nor th of Minas Gerais when pendimethalin + diuron were applied expressed as: 86.4%, 83.6% and 70.3% of the total weeds after 30,50 and 80 days, respectively. The mixtures dinitramine + fluome - turon and dinitroanilin + fluometuron showed the best results regard to a cotton yield of 1,532 Kg/ha, produced in the treated plots against only 229 kg/ha in the control (unhoed. The best combination for total weed control in the Metalúrgica region was dinitramine + diuron with an efficiency of 67% after 30 days. When differences in fiber production were considered, however, the best mixture was dinitramine + fluometuron, the treated plots yielding 831 kg/ha and the control 145 kg/ha.

  6. Tolerance to insect defoliation: biocenotic aspects

    Science.gov (United States)

    Andrey A. Pleshanov; Victor I. Voronin; Elena S. Khlimankova; Valentina I. Epova

    1991-01-01

    Woody plant resistance to insect damage is of great importance in forest protection, and tree tolerance is an important element of this resistance. The compensating mechanisms responsible for tolerance are nonspecific as a rule and develop after damage has been caused by phytophagous animals or other unfavorable effects. Beyond that, plant tolerance depends on duration...

  7. Molecular characterization and temporal expression analyses indicate that the MIC (Meloidogyne Induced Cotton) gene family represents a novel group of root-specific defense-related genes in upland cotton (Gossypium hirsutum L.).

    Science.gov (United States)

    Wubben, Martin J; Callahan, Franklin E; Hayes, Russel W; Jenkins, Johnie N

    2008-06-01

    The molecular events underlying the resistance of Upland cotton (Gossypium hirsutum L.) to the root-knot nematode (RKN) are largely unknown. In this report, we further characterize the previously identified MIC3 gene including the identification of 14 related MIC cDNAs in nematode-infected roots of allotetraploid cotton that show >85% identity with MIC3. A time-course analysis of RKN infection in resistant and susceptible cotton lines showed that maximum MIC transcript accumulation occurred immediately prior to the phenotypic manifestation of resistance. MIC expression was not induced by mechanical wounding or by virulent reniform nematode infection. MIC expression was undetectable in cotton leaves undergoing a hypersensitive response to Xanthomonas campestris. A time-course analysis of defense gene expression (PR10, ERF5, CDNS, LOX1, POD4, POD8) in resistant and susceptible cotton roots showed that RKN infection specifically elicits the induction of MIC in resistant roots and not other common defense-signaling pathways. These results suggest that cotton resistance to RKN involves novel defense-signaling pathways and further supports the idea that the MIC genes are intimately involved in this resistance response and represent a group of root-specific defense-related genes in cotton.

  8. Influência de diferentes níveis de desfolha na produção e qualidade dos frutos da bananeira 'Prata-Anã' Influence of different defoliation levels on the production and quality of 'Prata-Anã' banana fruits

    Directory of Open Access Journals (Sweden)

    Maria Geralda Vilela Rodrigues

    2009-09-01

    , principalmente no quarto e quinto ciclos. Concluiu-se que desfolha mais acentuada reduziu o potencial produtivo de cachos pela perda de área fotossintética. Assim, a melhor alternativa testada foi a manutenção de 10 a 12 folhas por planta, para se obterem adequado número de frutos e desenvolvimento dos mesmos, a fim de conciliar produção e fitossanidade do bananal.Banana tree defoliation, in a rational way, it is a cultural practice that should be accomplished periodically, aiming at eliminating those leaves whose photosynthetic activity does not assist to the physiological needs of the plant, bringing among other advantages, facilitating the disease control. Concerning to sigatoka spots, the elimination of injured leaves is an important auxiliary tool for its control, for reducing the source of secondary inoculum, however it should be done with criterion to not cause more serious damages than those ones caused by the own disease. It is known that the banana trees of the subgroup Cavendish need 11 and 8 whole leaves in the moment of flowering and harvesting, respectively, to produce the necessary photoassimilates for the stuffing of the bunch, however for banana 'Prata-Anã' this is unknown yet. To avoid misunderstandings in the 'Prata-Anã' management, it was evaluated, for five consecutive productive cycles, the effect of different levels of defloliation on the production, defining a better relationship of defoliation level: production. The handlings consisted of the maintenance of 4, 6, 8, 10, 12 and 14 leaves per plant, besides the control (removal just of the dry and broken leaves. The mass of the bunches was greater in the plants maintained with a minimum of 12 leaves, as well as most of the characteristics related to production. An appropriate number of hands and fingers, as well as most of the hands characteristics, occurred when at least 10 leaves per plant were maintained. More accentuated defoliations, in which were kept 4, 6, 8 or 10 leaves per plant, reducing

  9. A New Synthetic Allotetraploid (A1A1G2G2) between Gossypium herbaceum and G. australe: Bridging for Simultaneously Transferring Favorable Genes from These Two Diploid Species into Upland Cotton

    Science.gov (United States)

    Chen, Yu; Wang, Yingying; Chen, Jinjin; Zhang, Tianzhen; Zhou, Baoliang

    2015-01-01

    Gossypium herbaceum, a cultivated diploid cotton species (2n = 2x = 26, A1A1), has favorable traits such as excellent drought tolerance and resistance to sucking insects and leaf curl virus. G. australe, a wild diploid cotton species (2n = 2x = 26, G2G2), possesses numerous economically valuable characteristics such as delayed pigment gland morphogenesis (which is conducive to the production of seeds with very low levels of gossypol as a potential food source for humans and animals) and resistance to insects, wilt diseases and abiotic stress. Creating synthetic allotetraploid cotton from these two species would lay the foundation for simultaneously transferring favorable genes into cultivated tetraploid cotton. Here, we crossed G. herbaceum (as the maternal parent) with G. australe to produce an F1 interspecific hybrid and doubled its chromosome complement with colchicine, successfully generating a synthetic tetraploid. The obtained tetraploid was confirmed by morphology, cytology and molecular markers and then self-pollinated. The S1 seedlings derived from this tetraploid gradually became flavescent after emergence of the fifth true leaf, but they were rescued by grafting and produced S2 seeds. The rescued S1 plants were partially fertile due to the existence of univalents at Metaphase I of meiosis, leading to the formation of unbalanced, nonviable gametes lacking complete sets of chromosomes. The S2 plants grew well and no flavescence was observed, implying that interspecific incompatibility, to some extent, had been alleviated in the S2 generation. The synthetic allotetraploid will be quite useful for polyploidy evolutionary studies and as a bridge for transferring favorable genes from these two diploid species into Upland cotton through hybridization. PMID:25879660

  10. Coupling of MIC-3 overexpression with the chromosomes 11 and 14 root-knot nematode (RKN) (Meloidogyne incognita) resistance QTLs provides insights into the regulation of the RKN resistance response in Upland cotton (Gossypium hirsutum).

    Science.gov (United States)

    Wubben, Martin J; Callahan, Franklin E; Jenkins, Johnie N; Deng, Dewayne D

    2016-09-01

    Genetic analysis of MIC-3 transgene with RKN resistance QTLs provides insight into the resistance regulatory mechanism and provides a framework for testing additional hypotheses. Resistance to root-knot nematode (RKN) (Meloidogyne incognita) in Upland cotton (Gossypium hirsutum) is mediated by two major quantitative trait loci (QTL) located on chromosomes 11 and 14. The MIC-3 (Meloidogyne Induced Cotton3) protein accumulates specifically within the immature galls of RKN-resistant plants that possess these QTLs. Recently, we showed that MIC-3 overexpression in an RKN-susceptible cotton genotype suppressed RKN egg production but not RKN-induced root galling. In this study, the MIC-3 overexpression construct T-DNA in the single-copy transgenic line '14-7-1' was converted into a codominant molecular marker that allowed the marker assisted selection of F2:3 cotton lines, derived from a cross between 14-7-1 and M-240 RNR, having all possible combinations of the chromosomes 11 and 14 QTLs with and without the MIC-3 overexpression construct. Root-knot nematode reproduction (eggs g(-1) root) and severity of RKN-induced root galling were assessed in these lines. We discovered that the addition of MIC-3 overexpression suppressed RKN reproduction in lines lacking both resistance QTLs and in lines having only the chromosome 14 QTL, suggesting an additive effect of the MIC-3 construct with this QTL. In contrast, MIC-3 overexpression did not improve resistance in lines having the single chromosome 11 QTL or in lines having both resistance QTLs, suggesting an epistatic interaction between the chromosome 11 QTL and the MIC-3 construct. Overexpression of MIC-3 did not affect the severity of RKN-induced root galling regardless of QTL genotype. These data provide new insights into the relative order of action of the chromosomes 11 and 14 QTLs and their potential roles in regulating MIC-3 expression as part of the RKN resistance response.

  11. L'étiolement est un facteur d'induction de l'embryogenèse somatique au cours de la callogenèse chez deux variétés récalcitrantes de cotonnier (Gossypium hirsutum L. cultivées en Côte d'Ivoire

    Directory of Open Access Journals (Sweden)

    D’Almeida M. A.

    2004-01-01

    Full Text Available Darkness etiolement is a favorable pre-treatment to induce somatic embryogenesis from hypocotyls of cotton (Gossypium hirsutum L.. In vitro tissue culture of two varieties of cotton, ISA 2 0 5 N and ISA G L 7, (Gossypium hirsutum L . , cultivated in Côte d’Ivoire, was established from hypocotyls fragments. These fragments were excised from etiolated and non etiolated seedlings (absence or presence of chlorophyll. The objective of the study was to induce somatic embryogenesis from these genetically non embryogenic varieties. The non etiolated hypocotyls of both varieties showed a significantly higher percentage of callus induction compared to the etiolated ones. However, cells proliferation from etiolated hypocotyls were higher only for variety ISA 205 N. Histological study of callus indicated that embryogenic cells or embryos formation depend on the origin of explants used in culture. With callus derived from etiolated explants, embryogenesis started earlier and embryos at the globular and heart-shape stage were observed after four months. With callus generated by non etiolated explants, cellular division was high with no embryo formation. From these results, it appears that variety ISA 205 N is more embryogenic than ISA GL 7. Additionally, it was shown that the darkness pre-treatment of the cultured explants would be a good condition to induce somatic embryogenesis of cotton.

  12. Características morfogênicas e estruturais do capim-xaraés submetido à adubação nitrogenada e desfolhação Morphogenetic and structural characteristics of xaraésgrass submitted to nitrogen fertilization and defoliation

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    Janaina Azevedo Martuscello

    2005-10-01

    Full Text Available O trabalho foi realizado com o objetivo de se avaliarem as características morfogênicas e estruturais de Brachiaria brizantha cv. Xaraés, submetido a quatro doses de nitrogênio (0, 40, 80 e 120 mg/dm³ e três regimes de desfolhação (três, quatro e cinco folhas completamente expandidas, em um esquema fatorial 4 x 3. O experimento foi conduzido em casa de vegetação, com os tratamentos dispostos em um delineamento inteiramente casualizado, com quatro repetições. Após desbaste, foram mantidas três plantas por vaso com capacidade de 5,8 dm³. As plantas receberam adubação fosfatada e potássica, de acordo com análise de fertilidade do solo. A adubação nitrogenada, via solução aquosa, foi parcelada em quatro aplicações. Quando apresentaram número de folhas expandidas indicador de corte, as plantas foram colhidas a 5 cm do solo, iniciando-se as avaliações das características morfogênicas e estruturais. Os resultados indicaram que o nitrogênio tem efeito sobre as características morfogênicas e estruturais e sobre a produção de MS, com exceção da MS radicular. Observou-se incremento de até 37% na taxa de alongamento (cm/dia para a mais elevada dose de N (120 mg/dm³ em relação ao tratamento sem adubação nitrogenada. A freqüência de corte influenciou a taxa de alongamento foliar, o filocrono, o comprimento final da lâmina, o número de folhas vivas por perfilhos, a taxa de senescência e o teor matéria seca da parte aérea e raiz.The morphogenetic and structural traits of Brachiaria brizantha cv. Xaraés submitted to the treatment combinations of four nitrogen rates (0, 40, 80 and 120 mg/dm3 and three defoliation frequencies (two, four and five completely expanded leaves were evaluated according to a 4 x 3 factorial arrangement. The experiments were conducted in a greenhouse, with the treatments arranged as factorial combination. The experimental design was completely randomized, with four replications. After

  13. Características estruturais do dossel de capim-tanzânia submetido a três frequências de desfolhação e dois resíduos pós-pastejo Structural characteristc of tanzania grass canopy submitted to three frequencies of defoliation and two post-grazing residues

    Directory of Open Access Journals (Sweden)

    José Antonio Alves Cutrim Junior

    2011-03-01

    Full Text Available Foram avaliadas as características da biomassa do capim-tanzânia sob três frequências de desfolhação (85, 95 e 97% da interceptação da radiação fotossinteticamente ativa - IRFA e dois resíduos pós-pastejo (índices de área foliar residual de 1,0 e 1,8 em delineamento inteiramente casualizado em arranjo fatorial 3 × 2, com quatro repetições. O maior período de descanso foi verificado para o menor resíduo pós-pastejo e a frequência com 97% de IRFA. Observou-se uma altura elevada, assim como maior IAF para a frequência com 97% de IRFA. Já no caso da densidade populacional de perfilhos (DPP e no nº de folhas/perfilho, ocorreu uma interação entre os fatores, com uma redução nos seus valores nos pastos manejados com IAF residual de 1,8. As massas de forragem, com exceção da forragem morta, foram fortemente influenciadas pela frequência de desfolhação, mostrando maior produção para frequência de desfolhação com 95% de IRFA. A interceptação luminosa no residual, assim como a altura nessa condição, foram maiores para o maior resíduo pós-pastejo. A DPP residual apresentou interação entre os fatores com redução no perfilhamento nas freqüências 85 e 95% de IRFA no IAFr de 1,8. Na condição residual as massas de forragem foram fortemente influenciadas pelo IAF residual, com maior material remanescente do pastejo observado para o IAFr de 1,8. O uso de uma pastagem de capim-tanzânia não deve exceder 95% da interceptação da radiação fotossinteticamente ativa, mas é possível adotar resíduo pós-pastejo com índice área foliar residual 1,0.It was evaluated the characteristics of the biomass of Tanzania grass under three defoliation frequencies (85, 95 and 97% interception of the photosynthetically active radiation - IPAR and two post-grazing residue (residual leaf area index of 1.0 and 1.8 in a complete randomized design in a 3 × 2 factorial scheme with four replications. The longest resting period was

  14. The influence of thidiazuron on shoot regeneration from leaf explants of fifteen cultivars of Rhododendron

    Czech Academy of Sciences Publication Activity Database

    Pavingerová, Daniela

    2009-01-01

    Roč. 53, č. 4 (2009), s. 797-799 ISSN 0006-3134 Institutional research plan: CEZ:AV0Z50510513 Keywords : plant growth regulators * tissue culture * Rhododendron Subject RIV: EB - Genetics ; Molecular Biology Impact factor: 1.656, year: 2009

  15. Carry-over effect of Thidiazuron on banana in vitro proliferation at ...

    African Journals Online (AJOL)

    USER

    2010-05-24

    May 24, 2010 ... Shoot tip culture for propagation and conservation of Musa germplasm. Trop. Agric. (Trinidad) 62(4): 323-328. Vuylsteke D, Swennen R, de Langhe E (1990). Tissue culture technology for improvement of African plantains. INIBAP workshop on sigatoka leaf spot disease of bananas. San Jose, Costa Rica.

  16. Effect of thidiazuron on in vivo shoot proliferation of popular banana ...

    African Journals Online (AJOL)

    Moistened sawdust was steam-sterilized for 45 minutes and then filled for cooling in wooden propagators. Banana suckers were cleaned to remove roots and surface-sterilized for 15 seconds. The sterilized corms were deshealthed to expose axillary buds and decorticated to suppress the apical meristems. These corns ...

  17. Cloning of Gossypium hirsutum Sucrose Non-Fermenting 1-Related Protein Kinase 2 Gene (GhSnRK2) and Its Overexpression in Transgenic Arabidopsis Escalates Drought and Low Temperature Tolerance

    Science.gov (United States)

    Bello, Babatunde; Zhang, Xueyan; Liu, Chuanliang; Yang, Zhaoen; Yang, Zuoren; Wang, Qianhua; Zhao, Ge; Li, Fuguang

    2014-01-01

    The molecular mechanisms of stress tolerance and the use of modern genetics approaches for the improvement of drought stress tolerance have been major focuses of plant molecular biologists. In the present study, we cloned the Gossypium hirsutum sucrose non-fermenting 1-related protein kinase 2 (GhSnRK2) gene and investigated its functions in transgenic Arabidopsis. We further elucidated the function of this gene in transgenic cotton using virus-induced gene silencing (VIGS) techniques. We hypothesized that GhSnRK2 participates in the stress signaling pathway and elucidated its role in enhancing stress tolerance in plants via various stress-related pathways and stress-responsive genes. We determined that the subcellular localization of the GhSnRK2-green fluorescent protein (GFP) was localized in the nuclei and cytoplasm. In contrast to wild-type plants, transgenic plants overexpressing GhSnRK2 exhibited increased tolerance to drought, cold, abscisic acid and salt stresses, suggesting that GhSnRK2 acts as a positive regulator in response to cold and drought stresses. Plants overexpressing GhSnRK2 displayed evidence of reduced water loss, turgor regulation, elevated relative water content, biomass, and proline accumulation. qRT-PCR analysis of GhSnRK2 expression suggested that this gene may function in diverse tissues. Under normal and stress conditions, the expression levels of stress-inducible genes, such as AtRD29A, AtRD29B, AtP5CS1, AtABI3, AtCBF1, and AtABI5, were increased in the GhSnRK2-overexpressing plants compared to the wild-type plants. GhSnRK2 gene silencing alleviated drought tolerance in cotton plants, indicating that VIGS technique can certainly be used as an effective means to examine gene function by knocking down the expression of distinctly expressed genes. The results of this study suggested that the GhSnRK2 gene, when incorporated into Arabidopsis, functions in positive responses to drought stress and in low temperature tolerance. PMID:25393623

  18. Utilisation des espèces sauvages australiennes Gossypium sturtianum J.H. Willis et G. australe F. Muell. pour l'amélioration du cotonnier cultivé G. hirsutum L

    Directory of Open Access Journals (Sweden)

    Ahoton, L.

    2003-01-01

    Full Text Available Use of the Wild Australian Species Gossypium sturtianum J. H. Willis and G. australe F. Muell to Improve G. hirsutum L. Huit variétés de niébé améliorées et une locale (témoin ont été testées en champ pendant trois ans en vue d'évaluer leur performance à produire à la fois des graines et du fourrage. Les résultats obtenus montrent que les taux de germination et de croissance étaient élevés (80% pour toutes les variétés étudiées. Les moyennes de rendement étaient respectivement de 1262 à 3598 kg/ha pour la production de fourrage sec et de 528 à 1149 kg/ha pour la production de graines. Les variétés IAR 4/48/15-1, IAR 72 et TVU 12349 ont produit la plus grande quantité de feuilles vertes (&gt; 50% au stade de la récolte de graines durant la saison sèche tandis que les variétés IAR 4/48/15-1, IAR 7/180-4-5 et TVU 12349 ont produit le plus grand nombre de gousses par plant. Le poids de 100 graines le plus élevé a été produit par la variété IT89KD-288 et la variété témoin (Kananado. Le pourcentage moyen de la matière protéique variait de 15,2 à 21,6%.Une faible corrélation a été observée entre les rendements en graines, les rendements en fourrage et le rapport gousses/plant. Pour l'augmentation du revenu des fermiers, les variétés TVU 12349, IT89KD-288, IAR 7/180-4-12 et IAR 4/48/15-1 s'avèrent les plus performantes pour ces paramètres étudiés et sont à recommander dans un système de production intégré.

  19. Relações planta-animal em ambiente pastoril heterogêneo: padrões de desfolhação e seleção de dietas Plant-animal relationships in pastoral heterogeneous environments: defoliation and selectivity patterns

    Directory of Open Access Journals (Sweden)

    Edna Nunes Gonçalves

    2009-04-01

    , represented by four sward heights (4, 8 12 and 16 cm on defoliation and selectivity patterns of calves and ewes, in 45-minute grazing tests. A completely randomized design with four treatments and two replicates in time and space were used. Sward structure was characterized by sward height, herbage mass, leaf blade mass, herbage bulk density, leaf blade bulk density, and number and length of fully-emerged and emerging leaves. Forty tillers were marked in each experimental unit to determine the number and length of leaf blade. Defoliation and selectivity patterns were evaluated by defoliation probability and by passive selectively (PS and active selectively (AS indexes. A positive correlation between sward height and herbage mass, and negative between sward height and herbage bulk density were observed. Above 4 cm, leaf blade was almost exclusive, meaning optimal conditions for herbage intake by the animals. A reduction in the defoliation probability was observed with increasing sward height due to a lower stocking rate/available forage relationship. PS and AS were negatively affected by sward height. PS did not differ between calves and ewes, and above 6.7 cm, animals consumed less emerging leaf blade in relation to fully-emerged leaf blade. However, it did not mean that animals fail to select leaf blade, since AS remained above reference value 1 for both animal species. Ewes differed from calves in terms of AS. The increase in sward height affects the opportunity of animals to find emerging leaf blade, however, they selected younger leaf blade in the attempt to obtain a better food quality. Ewes selected emerging leaf blade more effectively than calves.

  20. Genetic relationships of cotton (Gossypium barbadense L ...

    African Journals Online (AJOL)

    The cluster analysis of the 24 cotton genotypes depending upon the morphological traits divided them into two main groups (A and B) while molecular data divided them into six groups. The cotton genotypes were distributed according to principal coordinate analysis (PCOORDA) analysis of both morphological traits and ...

  1. Biological and morphometric aspects and rearing of Syssphinx molina (Cramer (Lepidoptera: Saturniidae, a defoliator of parica tree Aspectos biológicos e morfométricos e criação de Syssphinx molina (Cramer (Lepidoptera: Saturniidae, desfolhadora de paricá

    Directory of Open Access Journals (Sweden)

    Telma Fátima Vieira Batista

    2013-06-01

    Full Text Available The objective of this research was to describe the biological and morphometric aspects of the parica tree defoliator, Syssphinx molina (Cramer, and make recommendations about the insect rearing. The life cycle was 62.9 days with mean periods for the egg, larval, pre-pupal and pupal stages of 5.6, 31.1, 2.2 and 16.6 days respectively. The pupal viability was 60.5% for females and 48.6% for males. The sexual ratio was 0.5 with mean production of 182.3 ± 2.2 eggs per female and egg viability of 24.3%. The mean longevity was 7.9 ± 2 and 8.1 ± 3 days for females and males respectively. Other parameters were also observed and compared with description of other Saturniidae species.O objetivo desse trabalho foi descrever os aspectos biológicos e morfométricos da lagarta desfolhadora do paricá, Syssphinx molina (Cramer, e fazer recomendações para a criação do inseto. O ciclo de vida foi de 62,9 dias com períodos médios para as fases de ovo, lagarta, pré-pupa e pupa de 5,6; 31,1; 2,2 e 16,6 dias, respectivamente. A viabilidade das pupas foi de 60,5% para fêmeas e 48,6% nos machos. A razão sexual foi de 0,5 e a produção média de 182,3 ± 2,2 ovos por fêmea com viabilidade de ovos de 24,3%. A longevidade média foi de 7,9 ± 2 e 8,1 ± 3 dias para fêmeas e machos, respectivamente. Outros parâmetros foram igualmente observados e comparados com a descrição de outras espécies de Saturniidae.

  2. Damage caused by different levels of artificial defoliation, simulating the leaf-cutting ants attack on young plantations of Pinus taeda and Eucalyptus grandis Danos causados por diferentes níveis de desfolha artificial para simulação do ataque de formigas cortadeiras em Pinus taeda e Eucalyptus grandis

    Directory of Open Access Journals (Sweden)

    Wilson Reis Filho

    2011-03-01

    Full Text Available

    The artificial defoliation allows to measure the defoliation intensity caused by insects. The objectives of this work were to evaluate the damages caused by leaf-cutting ants in young plantations of Pinus taeda and Eucalyptus grandis using different levels of artificial defoliation. A classification was established according to defoliation levels that were caused by leaf-cutting ants in P. taeda: level 1: 50%, level 2: 75%, level 3: 100% and level 4: 100%, including the cut of the apical meristem. And in E. grandis: level 1: 50% of defoliation; level 2: 75% and level 3: 100%. After one year, the P. taeda seedlings had losses in diameter and height for defoliation level above 75%. Seedlings severely defoliated (level 4, had losses of 37.0% in height and 45.4% in diameter. The E. grandis seedlings had losses since three months old and the reductions were proportional to the defoliation intensity. After one year, the losses of 13.3% in height and 20% in diameter were verified in plants with 100% of defoliation. P. taeda plants are more damaged by leaf-cutting attack.

    doi: 10.4336/2011.pfb.31.65.37

    A desfolha artificial permite mensurar a intensidade do dano devido à desfolha causada por insetos. No presente estudo, buscou-se avaliar os danos causados por formigas cortadeiras em plantios de Pinus taeda e Eucalyptus grandis com 30 dias de idade. Foi estabelecida uma classificação baseada em níveis de desfolha semelhantes aos causados por formigas cortadeiras. Para P. taeda, os níveis foram: N1: 50%, N2: 75%, N3: 100% e N4: 100% de desfolha, incluindo o corte do meristema apical. Para E. grandis, os níveis foram N1: 50%, N2: 75% e N3: 100% de desfolha, incluindo o corte do meristema apical. Após um ano, as mudas de P. taeda tiveram perdas em altura e diâmetro nos níveis de N2 a N4. Mudas de P. taeda desfolhadas no nível N4 apresentaram perdas de

  3. Comportamento ingestivo de novilhos sob suplementação em pastagens de capim-tanzânia sob diferentes intensidades de desfolhação Chewing activity of supplemented steers in pasture of tanzaniagrass submitted to different defoliation intensity

    Directory of Open Access Journals (Sweden)

    Ricardo Pereira Manzano

    2007-06-01

    Full Text Available Avaliou-se o efeito da intensidade de desfolhação da forragem e da suplementação protéica ou energética sobre o comportamento ingestivo de bovinos de corte. Foram utilizados oito novilhos canulados no rúmen, além dos animais traçadores para pastejar o capim-tanzânia (Panicum maximum Jacq., em um sistema rotacionado com ciclos de pastejo de 33 dias de descanso e três dias de ocupação. As intensidades de desfolhação pré-definidas foram 1.000 e 4.000 kg matéria seca verde/ha (kg MSV/ha. Os novilhos foram distribuídos em dois quadrados latinos 4 x 4 e separados em dois grupos iguais nos piquetes, onde receberam os suplementos: SS = sem suplementação; MMG = 2,24 kg/dia de milho moído grosso, peneira de 8 mm; MF = 2,24 kg/dia de milho floculado; FS = 0,80 kg/dia de farelo de soja. Em cada período de ocupação, o comportamento ingestivo dos animais foi avaliado durante 24 horas consecutivas com observações a cada 5 minutos durante o dia e a cada 15 minutos à noite. A suplementação reduziu somente o tempo de ruminação. Os tempos em pastejo (470,6 vs 354,3 minutos/dia e ruminação (408,5 vs 319,1 minutos/dia aumentaram, enquanto o tempo em ócio reduziu nos animais mantidos em pastagem com intensidade de desfolhação de 1.000 kg MSV/ha em comparação àqueles mantidos na intensidade de desfolhação de 4.000 kg MSV/ha. Não houve efeito significativo da suplementação ou da interação MSV × suplementação sobre o comportamento ingestivo dos animais. A intensidade de desfolhação da forragem, em comparação à prática de suplementação, exerceu efeito mais acentuado sobre o comportamento ingestivo de bovinos em pastejo.The objective of this trial was to study the effect of forage defoliation intensity and energy or protein supplementation on chewing activity of beef cattle. Eight Nellore steers fitted with ruminal cannula were used in a rotational grazing system of tanzaniagrass (Panicum maximum Jacq. with 33 days

  4. Influence of sward defoliation and soil disturbance on seedling ...

    African Journals Online (AJOL)

    Development of vegetation from seed requires a seed bank, germination, emergence and subsequent seedling survival. Reports on the influence of a number of practicably feasible treatments to the vegetation and soil on emergence and survival of grass seedlings in the Southern Tall Grassveld of Natal. Illustrates with ...

  5. The effect of animal size and adaptation on defoliation, selective ...

    African Journals Online (AJOL)

    A conceptual model of the veld-herbivore relationship is presented. Large-sized, largely grazing animals feed relatively unselectively on abundant roughage. The carrying capacity of veld for them is high. They are low producers per animal, but high producers per ha. Per unit of metabolic mass they have a relatively minor ...

  6. Effect of nitrogen application, seeding rate and defoliation height on ...

    African Journals Online (AJOL)

    The interaction between Trifolium vesiculosum cv Amclo and Lolium multiflorum cv Midmar was measured in a field trial, in terms of dry matter production, crude protein content and crude protein production. The treatments included in the field trials were five different seeding rates of the grass component, four rates of ...

  7. Biomass flow of the tanzânia grass under three defoliation frequencies and two post-grazing residues Fluxo de biomassa em capim-tanzânia sob três frequências de desfolhação e dois resíduos pós-pastejo

    Directory of Open Access Journals (Sweden)

    Hilton Alexandre Vidal Carneiro

    2010-09-01

    Full Text Available The biomass flow were evaluated in tanzania grass under two defoliations frequencies, consisting of three levels of photosynthetically active radiation interception (IRFA 85, 95 and 97% and two post-grazing residues (residual leaf area index, IAFr, 1.0 and 1.8 in an entirely randomized design in a factorial arrangement 3x2, with four replicates. It had effect of photosynthetically active radiation interception and of residual leaf area index under foliate appearance tax (TAlF. There was effect of the interaction IRFA x IAFr under the relationship TAlF1/TAlF2. The steam allonge tax (TAlH suffered effect only of photosynthetically active radiation interception. There was effect of photosynthetically active radiation interception and of IAFr under foliate senescence tax. The photosynthetically active radiation interception of 85% as well as residual leaf area index 1.8 obtained the great values of foliate appearance tax. The Phylochron suffered effect of the interaction IRFA x IAFr. For accumulation forages tax was effect only of the photosynthetically active radiation interception. There was an expressive increase of steam allonge tax along the grazing cycles. The use of moment of the tanzânia grass must not to exceed 95% of interception, being able to use a residual leaf area index of 1,0 and to promote greater losses of forage by senescence.Foi avaliado o fluxo de biomassa do capim-tanzânia sob três frequências de desfolhações (85, 95 e 97% de intercepção da radiação fotossinteticamente ativa, IRFA e dois resíduos pós-pastejo (1,0 e 1,8 de índice de área foliar residual, IAF residual num delineamento inteiramente casualizado em arranjo fatorial 3x2, com quatro repetições (piquetes. Houve efeito da intercepção da radiação fotossinteticamente ativa e do índice de área foliar residual residual sobre a taxa de alongamento foliar (TAlF. Houve efeito da interação IRFA x IAF residual sobre a relação TAlF1/TAlF2. A taxa de

  8. Benzilaminopurina (BAP e thidiazuron (TDZ na propagação in vitro de Pfaffia glomerata (Spreng. Pedersen Benzylaminopurine (BAP and thidiazuron (TDZ on in vitro propagation of Pfaffia glomerata (Spreng. Pedersen

    Directory of Open Access Journals (Sweden)

    R. Flores

    2009-01-01

    Full Text Available Pfaffia glomerata (Spreng. Pedersen, conhecida como ginseng brasileiro, é muito utilizada pela medicina popular devido suas propriedades fitoterápicas. Este trabalho teve como objetivo avaliar o efeito de concentrações de BAP e de TDZ na propagação in vitro de dois acessos (BRA e JB-UFSM desta espécie. Segmentos nodais, provenientes de plantas assépticas, foram cultivados em meio Murashige e Skoog (MS suplementado com 0, 1 e 5 μM de BAP ou TDZ. Após 30 dias, as plantas foram transferidas para meio MS não suplementado com citocinina. Observou-se que a organogênese in vitro de P. glomerata é genótipo-dependente. O acesso BRA mostrou um maior potencial para a propagação in vitro em relação ao JB-UFSM. O cultivo dos segmentos nodais do acesso BRA em meio com 1 μM de TDZ, seguido pelo subcultivo dos brotos para meio isento de citocininas mostrou ser um método viável para a propagação in vitro devido à alta taxa de multiplicação e o bom desenvolvimento das plantas. No acesso JB-UFSM, o cultivo dos segmentos nodais em meio não acrescido de citocinina mostrou ser o método mais adequado para a produção de um grande número de plantas com alta qualidade.The plant Pfaffia glomerata (Spreng. Pedersen, known as Brazilian ginseng, is extensively used in folk medicine due to its phytotherapic characteristics. This work aimed to evaluate the effect of BAP and TDZ concentrations on the in vitro propagation of two sources (BRA and JB-UFSM of this species. Nodal segments originated from aseptically grown plants were cultured on Murashige and Skoog (MS medium supplemented with 0, 1 and 5 μM BAP or TDZ. After 30 days, the plants were transferred to MS medium without cytokinin. The in vitro organogenesis of P. glomerata is genotype-dependent. The source BRA had greater potential for in vitro propagation than JB-UFSM. The culture of BRA nodal segments on medium with 1 μM TDZ, followed by subcultivation of sprouts on cytokinin-free medium, showed to be a viable method for in vitro propagation due to high multiplication rate and good plant development. In the source JB-UFSM, the culture of nodal segments on medium without cytokinin was the best method to obtain a large number of high-quality plants.

  9. Topolins and hydroxylated thidiazuron derivatives are substrates of cytokinin O-glucosyltransferase with position specificity related to receptor recognition

    Czech Academy of Sciences Publication Activity Database

    Mok, M. C.; Martin, R. C.; Dobrev, Petre; Vaňková, Radomíra; Yonekura-Sakakibara, K.; Sakakibara, H.; Mok, D. W. S.

    2005-01-01

    Roč. 137, č. 3 (2005), s. 1057-1066 ISSN 0032-0889 R&D Projects: GA ČR GA522/04/0549; GA MŠk ME 406 Institutional research plan: CEZ:AV0Z50380511 Keywords : ARABIDOPSIS-THALIANA * AROMATIC CYTOKININS * PHASEOLUS - VULGARIS Subject RIV: EF - Botanics Impact factor: 6.114, year: 2005

  10. Thidiazuron: A potent cytokinin for efficient plant regeneration in Himalayan poplar (Populus ciliata Wall. using leaf explants

    Directory of Open Access Journals (Sweden)

    Gaurav Aggarwal

    2012-11-01

    Full Text Available Populus species are important resource for certain branches of industry and have special roles for scientific study on biological and agricultural systems. The present investigation was undertaken with an objective of enhancing the frequency of plant regeneration in Himalayan poplar (Populus ciliata Wall.. The effect of Thiadizuron (TDZ alone and in combination with adenine and α-Naphthalene acetic acid (NAA were studied on the regeneration potential of leaf explants. A high efficiency of shoot regeneration was observed in leaf (80.00% explants on MS basal medium supplemented with 0.024 mg/l TDZ and 79.7 mg/l adenine. Elongation and multiplication of shoots were obtained on Murashige and Skoog (MS basal medium, containing 0.5 mg/l 6. Benzyl aminopurine (BAP + 0.2mg/l Indole 3-acetic acid (IAA + 0.3 mg/l Gibberellic acid (GA3. High frequency root regeneration from in vitro developed shoots was observed on MS basal medium supplemented with 0.10 mg/l Indole 3-butyric acid(IBA. Maximum of the in vitro rooted plantlets were well accomplished to the mixture of sand: soil (1:1 and exhibited similar morphology with the field plants. A high efficiency plant regeneration protocol has been developedfrom leaf explants in Himalayan poplar (Populus ciliata Wall..

  11. Effects of thidiazuron and paclobutrazol on regeneration potential of tulip flower stalk explants in vitro and subsequent shoot multiplication

    Directory of Open Access Journals (Sweden)

    Małgorzata Podwyszyńska

    2011-01-01

    Full Text Available The effects of TDZ and paclobutrazol on the primary regeneration on tulip flower stalk explants of six cultivars and subsequent shoot multiplication were examined. Explants, flower stalk slices, were excised from cooled and subsequently forced bulbs. The explants were incubated for two months in darkness on medium containing NAA and cytokinins, 2iP and BAP, as control, or TDZ (0.5-4 mg l-1 and paclobutrazol (0.05-0.4 mg l-1. Then, the regenerating explants were subcultured on medium with TDZ and NAA applied at low concentrations. Different regeneration capabilities were found depending on cultivar and growth regulators. The percentage of explants forming leaf-like structures ranged, on the control medium, from 80% in 'Blue Parrot' and 'Prominence' to below 30% in 'Apeldoorn' and 'Mirjoran'. TDZ, applied at optimum for each cultivar concentration, greatly increased the regeneration potential up to 70-100%. Paclobutrazol, added to the TDZ-containing medium, significantly enhanced the response of explants, resulting in high numbers of leaf-like structures formed per explant (13.7-22.8. The structures developed gradually into characteristic forms: the growing up cotyledonary leaf, the probable root primordium formed at its base, the growing downwards stolon and the shoot meristem developed finely on its tip. It is suggested that such primary regeneration may have a nature of somatic embryogenesis. Then, the adventitious shoots developed and formed clusters, which were divided into 2-3 smaller ones every two months. The growth regulators, used at initial stage, markedly influenced subsequent shoot multiplication. Thus, the most intensive shoot formation was noted with TDZ at concentrations of 0.5-2 mg l-1 and paclobutrazol of 0.05-0.1 mg l-1.

  12. High density of defoliated tomato plants in protected cultivation and its effects on development of trusses and fruits Alta densidade com desfolhamento de plantas de tomateiro em cultivo protegido e seus efeitos sobre o desenvolvimento de inflorescências e frutos

    Directory of Open Access Journals (Sweden)

    Miguel A. Sandri

    2002-09-01

    Full Text Available Tomato fruit setting on high density defoliated tomato plants with similar leaf area index was determined in three environmental conditions, inside polyethylene tunnels. Experiment 1 was carried out in autumn when average solar radiation received by the crop was 8.0 MJ m-2 day-1. Average external temperature was 18.1ºC. Experiments 2 and 3 were conducted in spring, when average external temperature was 19.7ºC. In experiment 2, average solar radiation received by the crop was 12.4 MJ m-2 day-1, whereas in experiment 3 it was reduced to 5.9 MJ m-2 day-1 by a 52% shading net. Plants were grown in bags, spaced 1.0 m between row and 0.3 m within row bags distance, using 5.5 L of a commercial substrate. Nutrients and water were supplied by means of a nutrient solution, delivered daily in order to replace volumes lost by transpiration. Treatments consisted of one (T1, two (T2 and three (T3 plants per bag, leading to plant densities of 3.3, 6.7 and 10 plants m-2, respectively. In T1, three leaves per sympod were kept, with a ratio of 3:1 between number of leaves and inflorescences per sympod. In T2, two and one leaf was kept respectively on two consecutive sympods, alternatively on both plants. The ratio between number of leaves and inflorescences was 3:2. In T3, with three plants per bag, only one leaf per sympod was kept on each plant. The ratio between number of leaves and inflorescences was 3:3. In all experiments, the number of trusses per area in T2 and T3 was two and three times higher than in T1, respectively. The number of fruits per unit ground area was lower in T1 plants and similar in T2 and T3 plants in the first experiment, whereas in the second and third experiments similar values were observed among treatments. Results indicated that tomato plants adjust the number of fruits, and exceeding flowers are aborted. The use of a plant density of 6.7 plants m-2 combined with a 3:2 ratio between number of leaves and inflorescences per unit

  13. Meiosis in a triploid hybrid of Gossypium: high frequency of ...

    Indian Academy of Sciences (India)

    1Division of Genetics, Indian Agricultural Research Institute, New Delhi 110 012, India. 2Present ... Journal of Genetics, Vol. 86, No. 1, April .... spindle probably occurs through the combined effects of mi- crotubule bundling and specific motor activities (Waters and. Salmon 1997). In Lilium longiflorum, for example, bipolarity.

  14. Genetic transformation of cry1EC gene into cotton (Gossypium ...

    African Journals Online (AJOL)

    welcome

    2013-04-10

    Apr 10, 2013 ... cry1EC gene (Figure 4). No amplified product was detected from non transformed plant and the transformation efficiency measured as % of confirmed transgenic plant out of total number of plants raised and it was found to be 80% in T0 generation. Transgenic plant showing highest larval mortality rate has.

  15. Screening of cotton (gossypium hirsutum l.) genotypes for heat tolerance

    International Nuclear Information System (INIS)

    Abro, S.; Khan, M.A.; Sial, M.A.

    2015-01-01

    Cotton yield is highly affected due to biotic (diseases and pests) and abiotic (heat, dought and salinity) Stresses. Among them, high temperature is the main environmental constraint which adversely reduces cotton yield and quality. High temperature above 36 degree C affects plant growth and development especially during reproductive phase. Present studies were carried out to assess the tolerance of fifty-eight newly evolved cotton genotypes to heat stresses, based on agronomic and physiological characteristics. The genotypes were screened in field conditions under two temperature regimes. The studies were conducted at experimental farm of Nuclear Institute of Agriculture, Tando Jam, Pakistan. The results showed that March sown crop experienced high temperature (i.e. > 44 degree C in May and June), which significantly affected crop growth and productivity. The genotypes were identified as heat-tolerant on the basis of relative cell injury percentage (RCI %), heat susceptibility index (HSI) values, boll retention and seed cotton yield (kg/ha). RCI level in cotton genotypes ranged from 39.0 to 86.0%. Out of 58, seventeen genotypes (viz.NIA-80, NIA-81, NIA-83, NIA-84, NIA-M-30, NIA-M31, NIA-HM-48, NIA-HM-327, NIA-H-32, NIA-HM-2-1, NIA-Bt1, NIA-Bt2, NIA-Perkh, CRIS-342, CRIS-134, NIAB-111 and check variety Sadori indicated high level of heat tolerance at both (heat-stressed and non-stressed) temperature regimes; as shown the lowest relative injury level and relatively heat resistant index (HSI<1) values. Such genotypes could be used as heattolerant genotypes under heat-stressed environments. (author)

  16. Multiple shoot regeneration of cotton (Gossypium hirsutum L.) via ...

    African Journals Online (AJOL)

    user

    2011-03-14

    Corresponding author. E-mail: mitra_cb@yahoo.com. Cotton crop has been difficult to manipulate with high efficiency, since the tissue culture method used for rege- nerating transgenic plants was by indirect transformation.

  17. Yield and fiber quality properties of cotton (Gossypium hirsutum L ...

    African Journals Online (AJOL)

    Jane

    2011-10-03

    Oct 3, 2011 ... Key words: Cotton, yield, fiber quality properties, water stress, non-stress. INTRODUCTION. Water stress is the most important factor limiting crop productivity and adversely affects fruit production, square and boll shedding, lint yield and fiber quality properties in cotton (El-Zik and Thaxton, 1989). As the ...

  18. Correlations and Correlated Responses in Upland Cotton (Gossypium hirsutum L.

    Directory of Open Access Journals (Sweden)

    Echekwu, CA.

    2001-01-01

    Full Text Available Plant breeders must be concerned with the total array of economic characters in their efforts to develop a crop variety acceptable to farmers. Their selection endeavours must therefore take into consideration how changes in one trait affect, simultaneously changes in other economic attributes. The importance of correlations and correlated responses is therefore self evident in plant breeding endeavours. In this study F3 progenies from a cross between two cotton lines SAMCOT-9 x Y422 were evaluated for two years and performance data were used to obtain correlations between nine agronomic and fibre quality traits in upland cotton. The results indicated that plant helght was significantly and positively correlated with seed cotton yield, number of sympodial and monopodial branches, seed index, fibre length and micronaire index. Positive and significant correlations were also obtained between : seed cotton yield, tint percent and fibre strength and fibre length. Significant negative correlations were obtained between : plant height and lint percent ; number of monopodial branches, sympodial branches and lint percent ; fibre length, fibre strength and micronaire index. The correlated responses in the other eight traits when selection was practiced for seed cotton yield in the present study shows that it might be more profitable to practice direct selection for seed cotton yield compared to selecting for seed cotton yield through any of the other traits.

  19. Genetic transformation of cry1EC gene into cotton ( Gossypium ...

    African Journals Online (AJOL)

    Cotton is the chief fibre crop of global importance. It plays a significant role in the national economy. Cotton crop is vulnerable to a number of insect species, especially to the larvae of lepidopteron pests. 60% insecticides sprayed on cotton are meant to control the damage caused by bollworm complex. Transgenic ...

  20. A Mechanism for the Anti-inflammatory Activity of Gossypium ...

    African Journals Online (AJOL)

    -inflammatory action. The extract showed membrane stabilizing activities between 73.18 + 0.54% and 88.58 + 0.77% at an extract concentration range of 2.34 to 11.70mg/ml. The conventional drugs used as positive controls, acetylsalicylic acid ...

  1. Yield and fiber quality properties of cotton ( Gossypium hirsutum L ...

    African Journals Online (AJOL)

    The primary objective of this study was to determine the effect of water stress and non-stress conditions on cotton yield and fiber quality properties. A two-year field study was carried out at the Southeastern Anatolia Agricultural Research Institute (SAARI), in 2009 and 2010, with the aim of evaluating 12 cotton genotypes for ...

  2. Characterization of two cotton (Gossypium hirsutum L) invertase genes.

    Science.gov (United States)

    Taliercio, Earl; Scheffler, Jodi; Scheffler, Brian

    2010-12-01

    Two cotton vacuolar-invertase genes were identified and sequenced. Both genes had seven exons, including an unusually small second exon typical of acid invertases. These genes encode peptides with many features shared by acid invertases from other species including, leader sequences that probably target the peptide to the vacuole, active site motifs and substrate binding motifs. Expression analyses indicated that one of the genes was expressed in roots during the starch filling stage of development. However, expression of the same gene fluctuated during the starch utilization stage of development. Therefore this gene was unlikely to play a role in determining sink strength of this tissue. Both genes were expressed in elongating fibers where they were likely to play a role in cell expansion. The invertase gene uniquely expressed in fiber had a simple sequence repeat (SSR) in the third intron that was polymorphic among various cotton species. An EST was identified with an expansion of the SSR that included the third intron indicating this SSR is associated with a splice variant. The polymorphic SSR may be useful in investigating the function of this gene in fiber development.

  3. Cochlospermum religiosum (L.) Alston Syn. C. gossypium DC ...

    Indian Academy of Sciences (India)

    flowered cotton tree;. Hindi Gabdi, Galgal) of Cochlospermaceae is a small deciduous tree with smooth ash-coloured fibrous, deeply furrowed bark containing gum and lobed leaves. Flowers (in the foreground) which appear after leaffall are ...

  4. (Gossypium hirsutum L. race latifolium H.) cultivars and inbred lines ...

    African Journals Online (AJOL)

    Jane

    2010-12-13

    Dec 13, 2010 ... (L) Inbred line. Numbers from 10 to 21 refer to the four cultivars and eight inbred lines from US introduced in Mozambique in 2006. Table 2. Decamer arbritary primers used for DNA amplification. Primer. Nucleotide sequence (5' – 3'). Primer. Nucleotide sequence (5' – 3'). OPA-11. CAA TCG CCG T. OPF-16.

  5. (Gossypium hirsutum L.) au déficit hydrique indui

    African Journals Online (AJOL)

    Sci-Nat

    l'hypochlorite de sodium (2,5 %) pendant 20 min et rincer trois fois à l'eau distillée stérile. Les graines stériles sont ensuite placées une à une dans des tubes à ..... calcium in improving the PEG-induced water stress tolerance in liquorice cells. Bot. Bull. Acad. Sinica. 44 (4): 275-284. May L.H., & Milthrope F.L., 1962. Drought ...

  6. Meiosis in a triploid hybrid of Gossypium: high frequency of ...

    Indian Academy of Sciences (India)

    ... in a cell, meiosis I proceeded normally, with polyad formation. These observations strongly support the view that in plant meiocytes bilateral kinetochore symmetry is not required for establishing a bipolar spindle and that single unpaired chromosomes can initiate and stabilize the formation of a functional bipolar spindle.

  7. Asymmetric evolution and domestication in allotetraploid cotton (Gossypium hirsutum L.

    Directory of Open Access Journals (Sweden)

    Lei Fang

    2017-04-01

    Full Text Available Polyploidy plays a major role in genome evolution, which corresponds to environmental changes over millions of years. The mechanisms of genome evolution, particularly during the process of domestication, are of broad interest in the fields of plant science and crop breeding. Upland cotton is derived from the hybridization and polyploidization of its ancient A and D diploid ancestors. As a result, cotton is a model for polyploid genome evolution and crop domestication. To explore the genomic mysteries of allopolyploid cotton, we investigated asymmetric evolution and domestication in the A and D subgenomes. Interestingly, more structural rearrangements have been characterized in the A subgenome than in the D subgenome. Correspondingly, more transposable elements, a greater number of lost and disrupted genes, and faster evolution have been identified in the A subgenome. In contrast, the centromeric retroelement (RT-domain related sequence of tetraploid cotton derived from the D subgenome progenitor was found to have invaded the A subgenome centromeres after allotetrapolyploid formation. Although there is no genome-wide expression bias between the subgenomes, as with expression-level alterations, gene expression bias of homoeologous gene pairs is widespread and varies from tissue to tissue. Further, there are more positively selected genes for fiber yield and quality in the A subgenome and more for stress tolerance in the D subgenome, indicating asymmetric domestication. This review highlights the asymmetric subgenomic evolution and domestication of allotetraploid cotton, providing valuable genomic resources for cotton research and enhancing our understanding of the basis of many other allopolyploids.

  8. Problems and achievements of cotton (Gossypium Hirsutum L. weeds control

    Directory of Open Access Journals (Sweden)

    T. Barakova

    2017-09-01

    Full Text Available Abstract. Weed control in the cultivation of cotton is critical to the yield and quality of production. The influence of economically important weeds was studied. Chemical control is the most effective method of weed control in cotton but much of the information on it relates to primary weed infestation. Problems with primary weed infestation in cotton have been solved to a significant extent. The question of secondary weed infestation with annual and perennial graminaceous weeds during the period of cotton vegetation is also determined largely by the use of antigraminaceous herbicides. The data related to herbicides to effectively control secondary germinated broadleaf weeds in conventional technology for cotton growing are quite scarce, even globally. We are still seeking effective herbicides for control of these weeds in cotton crops. Studies on their influence on the sowing characteristics of cotton seed and the quality of cotton fiber are still insufficient. In the scientific literature there is not enough information on these questions. The combinations of herbicides, as well as their tank mixtures with fertilizers or plant growth regulators are more efficient than autonomous application. Often during their combined application higher synergistic effect on yield is produced. There is information about cotton cultivars resistant to glyphosate. These cultivars are GMO and they are banned within the European Union, including Bulgaria.

  9. Effects of cottonseed oil (Gossypium Spp.) and cottonseed meal on ...

    African Journals Online (AJOL)

    Experiments were conducted to determine the effects of various forms of cottonseed oil (whole Cottonseed, “Refined” industrially extracted Cottonseed oil and “Crude” locally extracted Cottonseed oil) on the Estrous cycle and Ovulation, and Histoarchitecture of female reproductive organs. Regular 4-day adult cyclic female ...

  10. APPLICATION OF DRIP IRRIGATION ON COTTON PLANT GROWTH (Gossypium sp.

    Directory of Open Access Journals (Sweden)

    Syahruni Thamrin

    2017-12-01

    Full Text Available The condition of cotton planting in South Sulawesi is always constrained in the fulfillment of water. All plant growth stages are not optimal to increase production, so it is necessary to introduce good water management technology, such as through water supply with drip irrigation system. This study aims to analyze the strategy of irrigation management in cotton plants using drip irrigation system. Model of application by designing drip irrigation system and cotton planting on land prepared as demonstration plot. Observations were made in the germination phase and the vegetative phase of the early plants. Based on the result of drip irrigation design, the emitter droplet rate (EDR was 34.266 mm/hour with an operational time of 4.08 min/day. From the observation of cotton growth, it is known that germination time lasted from 6 to 13 days after planting, the average plant height reached 119.66 cm, with the number of leaves averaging 141.93 pieces and the number of bolls averaging 57.16 boll.

  11. Canalization of Gene Action in the Gossypium Leaf Shape System

    Indian Academy of Sciences (India)

    genotype and is therefore not a function of the leaf-shape locus itself. The true inter- pretation ... by Slow and the writer as distinct-can no longer be considered so when subjected to more critical examination. ..... rapidly increasing numbers followed by intraspecific competition, are starvation or epi- demic outbreaks which ...

  12. Cochlospermum religiosum (L.) Alston Syn. C. gossypium DC ...

    Indian Academy of Sciences (India)

    fibrous, deeply furrowed bark containing gum and lobed leaves. Flowers (in the foreground) which appear after leaffall are large, golden yellow in terminal branched inflorescences. Fruit is large, and pear-shaped. Seeds are numerous and are covered with woolly hairs. Dried leaves and flowers are used as stimulant.

  13. An evaluation of some mutant cotton ( Gossypium hirsutum L ...

    African Journals Online (AJOL)

    The trial was established in randomized block design with four replications in four years (2001 to 2004). In the study, plant height, monopodia, number of sympodia and boll, weight of seed cotton per boll, ginning outturn, 100 seed weight, seed cotton yield, earliness ratio, fiber length, fiber fineness, strength and uniformity ...

  14. An evaluation of some mutant cotton (Gossypium hirsutum L ...

    African Journals Online (AJOL)

    user1

    2013-08-14

    Aug 14, 2013 ... The aim of this study was to determine seed cotton yield, yield components and fiber technological properties .... genotypes and environments. Genotype- .... Combined analysis of variance of the varieties tested for yield,yield components, earliness and fiber quality characters for four years (2001 to 2004).

  15. Comparative genomic study of ALDH gene superfamily in Gossypium: A focus on Gossypium hirsutum under salt stress.

    Directory of Open Access Journals (Sweden)

    Yating Dong

    Full Text Available Aldehyde dehydrogenases (ALDHs are a superfamily of enzymes which play important role in the scavenging of active aldehydes molecules. In present work, a comprehensive whole-genomic study of ALDH gene superfamily was carried out for an allotetraploid cultivated cotton species, G. hirsutum, as well as in parallel relative to their diploid progenitors, G. arboreum and G. raimondii. Totally, 30 and 58 ALDH gene sequences belong to 10 families were identified from diploid and allotetraploid cotton species, respectively. The gene structures among the members from same families were highly conserved. Whole-genome duplication and segmental duplication might be the major driver for the expansion of ALDH gene superfamily in G. hirsutum. In addition, the expression patterns of GhALDH genes were diverse across tissues. Most GhALDH genes were induced or repressed by salt stress in upland cotton. Our observation shed lights on the molecular evolutionary properties of ALDH genes in diploid cottons and their alloallotetraploid derivatives. It may be useful to mine key genes for improvement of cotton response to salt stress.

  16. Combined effects of fungal inoculants and the cytokinin-like growth regulator thidiazuron on growth, phytohormone contents and endophytic root fungi in Miscanthus × giganteus

    Czech Academy of Sciences Publication Activity Database

    Schmidt, Christoph Stephan; Mrnka, Libor; Frantík, Tomáš; Motyka, Václav; Dobrev, Petre; Vosátka, Miroslav

    2017-01-01

    Roč. 120, č. 9 (2017), s. 120-131 ISSN 0981-9428 R&D Projects: GA TA ČR TE01020080; GA ČR(CZ) GA16-14649S Institutional support: RVO:67985939 Keywords : Miscanthus * symbiotic fungi * phytohormones Subject RIV: EF - Botanics; EB - Genetics ; Molecular Biology (UEB-Q) OBOR OECD: Plant sciences, botany; Biochemistry and molecular biology (UEB-Q) Impact factor: 2.724, year: 2016

  17. The effect of fire, with and without subsequent defoliation on the ...

    African Journals Online (AJOL)

    On plots where the burn was followed by an 8-weekly clipping treatment, a slower biomass accumulation rate of the sward as a whole was recorded than on burnt plots allowed unchecked post-fire regrowth. The lowest rate was recorded on unburnt plots allowed unchecked growth. The burn plus 8-weekly clipping reduced ...

  18. Dispelling the 'bitter fog': fighting chemical defoliation in the American West.

    Science.gov (United States)

    Hay, Amy M

    2012-12-01

    Little doubt remains about the influence of Rachel Carson's Silent Spring in changing the consciousness of not just Americans, but citizens around the world, regarding the relationship between human beings and the natural world. Less has been done about the specific ways Carson's book inspired individual activists to continue challenging pesticide policy within the United States in the decades after the book's publication. The stories of three western women fighting the use of Agent Orange herbicides - the phenoxy herbicides 2,4-D and 2,4,5-T - illustrate the influence and mixed success of environmental activism after Silent Spring. Copyright © 2012 Elsevier Ltd. All rights reserved.

  19. Defoliation and mortality patterns in forests silviculturally managed for gypsy moth

    Science.gov (United States)

    Kurt W. Gottschalk; Rose-Marie Muzika

    1995-01-01

    Mixed hardwood forests of the Appalachian region support one of the most diverse communities of woody plants in North America, but the composition and relative dominance of the forest changes substantially with slight changes in physiography, soil type, or microclimate. Composition of oak and other species highly preferred by the gypsy moth determines the...

  20. The growth of veld in response to defoliation by various means in ...

    African Journals Online (AJOL)

    An experiment was concluded on Dohne Sourveld to determine the effect of mowing and burning during the late winter and spring on subsequent herbage yields. Mowing in spring and burning in late winter before rain gave the highest and lowest yields respectively. There was no difference between burning after the late ...

  1. Hybridization of an invasive shrub affects tolerance and resistance to defoliation by a biological control agent

    OpenAIRE

    Williams, Wyatt I; Friedman, Jonathan M; Gaskin, John F; Norton, Andrew P

    2014-01-01

    Evolution has contributed to the successful invasion of exotic plant species in their introduced ranges, but how evolution affects particular control strategies is still under evaluation. For instance, classical biological control, a common strategy involving the utilization of highly specific natural enemies to control exotic pests, may be negatively affected by host hybridization because of shifts in plant traits, such as root allocation or chemical constituents. We investigated introgressi...

  2. Do differences in inducible resistance explain the population dynamics of birch and pine defoliators?

    Science.gov (United States)

    Seppo Neuvonen; Pekka Niemela

    1991-01-01

    Damage inflicted by insects may trigger responses in their host plants resulting either in immediate effects on herbivores either rapidly or in effects upon subsequent herbivore generations. Differentiation between rapid and delayed inducible resistance is essential since the two responses affect the population dynamics of herbivores in fundamentally different ways (...

  3. DEFOLIATING BROAD NOSED WEEVIL, Plectrophoroides lutra; NOT SUITABLE FOR BIOLOGICAL CONTROL OF BRAZILIAN PEPPER

    Science.gov (United States)

    The adults of the weevil Plectrophoroides lutra were evaluated for potential as an agent for biological control of Schinus terebinthifolius. Our Brazilian field observations indicated that the adults were only collected from S. terebinthifolius, however when tested on North American and other valued...

  4. A Florida defoliator found: Nystalea ebalea (Lepidoptera: Notodontidae) feeding on Brazilian peppertree

    Science.gov (United States)

    A species of Notodontidae, Nystalea ebalea was discovered feeding on leaflets of the invasive weed Schinus terebinthifolius in south Florida. The larvae of this species have generally 5 instars and require 20-22 d to reach the pupal stage. Discovery of wild populations of this Neotropical species in...

  5. Leaf area index of Norway spruce stands in relation to age and defoliation

    Czech Academy of Sciences Publication Activity Database

    Pokorný, Radek; Stojnič, S.

    2012-01-01

    Roč. 5, č. 2 (2012), s. 173-180 ISSN 1803-2451 R&D Projects: GA MŠk(CZ) ED1.1.00/02.0073; GA TA ČR TA02010945 Institutional support: RVO:67179843 Keywords : health status * LAI * needle * Picea abies Subject RIV: GK - Forestry

  6. Note on gynandromorphism in the eucalyptus defoliator Thyrinteina arnobia (Stoll, 1782 (Lepidoptera: Geometridae

    Directory of Open Access Journals (Sweden)

    Aline S. Bernardino

    2007-06-01

    Full Text Available The brown moth Thyrinteina arnobia (Stoll, 1872 (Lepidoptera: Geometridae is an important pest in Brazilian eucalyptus plantations. A gynandromorph individual of T. arnobia was found in a population of this pest in a laboratory rearing and it is described.A mariposa marrom Thyrinteina arnobia (Stoll, 1872 (Lepidoptera: Geometridae é uma praga importante em plantios de eucalipto no Brasil. Um indivíduo ginandromorfo de T. arnobia foi encontrado em uma população desta praga em criação de laboratório e descrito nesta nota.

  7. Defoliation and bark harvesting affect life-history traits of a tropical tree

    DEFF Research Database (Denmark)

    Gaoue, Orou; Horvitz, Carol; Ticktin, Tamara

    2013-01-01

    Selectively harvesting whole individuals in managed populations (e.g. fisheries, hunting) has substantial effects on life expectancy and age at maturity. Although demographic rates of trees are impacted by recurrent harvest of plant organs (e.g. fruit, leaf, bark) known as non-timber forest...... products, the effect of such harvesting on life-history traits is less explored. Here, we investigate how different strategies of foliage and bark harvest by local people affect life expectancy and age at maturity of Khaya senegalensis across two climatic regions in West Africa. We compare elasticities....... However, there is an interactive effect of harvest on life-history traits between regions. Increasing harvesting pressure accelerates maturity and reduces life expectancy in the dry region but delays reproduction and increases life expectancy in the moist region. This indicates that stochasticity...

  8. Effects of defoliation on growth characteristics and N, P, K content in ...

    African Journals Online (AJOL)

    Les semis d'Alnus étaient sujets a 0, 25, 50 et 75% de défoliation artificielle répétée. La défoliation a réduit la hauteur et le diamètre, et la biomasse de tige, de feuille, de racine et de nodule en Alnus. L'Alnus a montré bien que principalement non significatif (P<0,05), la performance de croissance en culture croisée élevée ...

  9. Elevational gradient in the cyclicity of a forest-defoliating insect

    Science.gov (United States)

    Kyle J. Haynes; Andrew M. Liebhold; Derek M. Johnson

    2012-01-01

    Observed changes in the cyclicity of herbivore populations along latitudinal gradients and the hypothesis that shifts in the importance of generalist versus specialist predators explain such gradients has long been a matter of intense interest. In contrast, elevational gradients in population cyclicity are largely unexplored. We quantified the cyclicity of gypsy moth...

  10. Direct and indirect influences of intercrops on the coconut defoliatorOpisina arenosella.

    Science.gov (United States)

    Shameer, K S; Nasser, M; Mohan, Chandrika; Hardy, Ian C W

    2018-01-01

    Coconut palm ( Cocos nucifera ) infestation by Opisina arenosella (Lepidoptera: Oecophoridae) in the Indian subcontinent may occur in November to May each year in the same or adjoining areas of plantations. Parasitoids of O. arenosella may also be consistently present at these times. During other periods, pests and/or parasitoids could be maintained on intercrops that are commonly grown throughout the year. Field surveys of 54 intercrop species in Kerala, India, found that O. arenosella attacks banana, but not others, while laboratory screening showed that O. arenosella can mature on jack fruit, cashew and oil palm. Larvae of 20 lepidopteran species found on intercrops were screened for use by Goniozus nephantidis (Hymenoptera: Bethylidae), a larval parasitoid of O. arenosella , which oviposited on two species but its offspring failed to mature. Thirteen intercrop herbivore species were screened for use by Brachymeria nosatoi (Hymenoptera: Chalcididae), a pupal parasitoid of O. arenosella , which completed development on the pyralids Herculia nigrivita , Syllepte derogata and Psara basalis . Further, connectance trophic webs were compiled using prior field records of coconut, 33 species of intercrops, 58 species of lepidopteran herbivores and 29 species of primary parasitoids. Both laboratory and literature evidence suggests that populations of O. arenosella are unlikely to be maintained by feeding on intercrops or strongly influenced by direct competition with other lepidopterans but are likely to be affected by sharing parasitoids. Intercrop herbivores have clear potential for maintaining parasitoids of O. arenosella, and we recommend thirteen plant species as intercrops that should aid in conservation biocontrol.

  11. Single nucleotide polymorphism analysis of ubiquitin extension protein genes (ubq) of gossypium arboreum and gossypium herbaceum in comparison with arabidopsis thaliana

    International Nuclear Information System (INIS)

    Shaheen, T.; Zafar, Y.; Rahman, M.

    2014-01-01

    Single nucleotide polymorphism analysis is an expedient way to study polymorphisms at genomic level. In the present study we have explored Ubiquitin extension protein gene of G. arboreum (A2) and G. herbaceum (A1) of cotton which is a multiple copy gene. We have found SNPs at 16 positions in 200 bp region within A genome of cotton indicating frequency of SNPs 1/13 bp. Both sequences from cotton have shown maximum similarity with UBQ5 and UBQ6 of Arabidopsis thaliana. Sequence obtained from G. arboreum has shown SNPs at 28 positions in comparison with each UBQ5 and UBQ6 of Arabidopsis thaliana while sequence obtained from G. herbaceum has shown SNPs at 31 positions in comparison with each UBQ5 and UBQ6 of Arabidopsis thaliana. In conclusion although during pace of evolution ubiquitin extension protein genes of both A genome species have got some mutations from nature but still most of their sequence is similar. Single nucleotide polymorphism study can prove a vital tool to identify gene type in case of Multicopy genes. (author)

  12. The draft genome of a diploid cotton Gossypium raimondii

    DEFF Research Database (Denmark)

    Wang, Kunbo; Wang, Zhiwen; Li, Fuguang

    2012-01-01

    identified 2,355 syntenic blocks in the G. raimondii genome, and we found that approximately 40% of the paralogous genes were present in more than 1 block, which suggests that this genome has undergone substantial chromosome rearrangement during its evolution. Cotton, and probably Theobroma cacao...

  13. How to be sweet? Extra floral nectar allocation by Gossypium hirsutum fits optimal defense theory predictions

    NARCIS (Netherlands)

    Wäckers, F.L.; Bonifay, C.

    2004-01-01

    Plants employ nectar for two distinct functions. Floral nectar has traditionally been viewed in the context of pollination. Extrafloral nectar on the other hand, can act as an indirect defense, allowing the plant to recruit predators and parasitoids. Whereas this makes for a clear-cut

  14. Whole linted cottonseed meal (Gossypium hirsutum L. protein and fiber degradability in the rumen

    Directory of Open Access Journals (Sweden)

    Deborah Clea Ruy

    1996-12-01

    3 x 3 change-over design to evaluate the following treatments: A = 0% WLC; B = 6.6% WLC; and C = 15.0% WLC. Sorghum silage contributed with 70% in all three treatments. DM degradability at 48h incubation time was statistically different (p < 0.05 (A = 54.4%; B = 54.2% and C = 58.7%, as well as PB degradability at 12h (A = 40.3%; B = 47.7% and C = 53.1% and ADF degradability at 48h (A = 40.3%; B = 41.2% and C = 45.6%. Ruminal volume, turn overtime and ruminal pH weren’t affected by the experimental diets. Substitution of WLC for cottonseed meal up to 15% diet increased degradability of DM, CP and ADF of WLC.

  15. Herbicide-resistant cotton (Gossypium hirsutum) plants: an alternative way of manual weed removal.

    Science.gov (United States)

    Latif, Ayesha; Rao, Abdul Qayyum; Khan, Muhammad Azmat Ullah; Shahid, Naila; Bajwa, Kamran Shehzad; Ashraf, Muhammad Aleem; Abbas, Malik Adil; Azam, Muhammad; Shahid, Ahmad Ali; Nasir, Idrees Ahmad; Husnain, Tayyab

    2015-09-17

    Cotton yield has been badly affected by different insects and weed competition. In Past Application of multiple chemicals is required to manage insects and weed control was achieved by different conventional means, such as hand weeding, crop rotation and polyculture, because no synthetic chemicals were available. The control methods shifted towards high input and target-oriented methods after the discovery of synthetic herbicide in the 1930s. To utilise the transgenic approach, cotton plants expressing the codon-optimised CEMB GTGene were produced in the present study. Local cotton variety CEMB-02 containing Cry1Ac and Cry2A in single cassette was transformed by synthetic codon-optimised 5-enolpyruvylshikimate-3-phosphate synthase gene cloned into pCAMBIA 1301 vector under 35S promoter with Agrobacterium tumifaciens. Putative transgenic plants were screened in MS medium containing 120 µmol/L glyphosate. Integration and expression of the gene were evaluated by PCR from genomic DNA and ELISA from protein. A 1.4-kb PCR product for Glyphosate and 167-bp product for Cry2A were obtained by amplification through gene specific primers. Expression level of Glyphosate and Bt proteins in two transgenic lines were recorded to be 0.362, 0.325 µg/g leaf and 0.390, 0.300 µg/g leaf respectively. FISH analysis of transgenic lines demonstrates the presence of one and two copy no. of Cp4 EPSPS transgene respectively. Efficacy of the transgene Cp4 EPSPS was further evaluated by Glyphosate spray (41 %) assay at 1900 ml/acre and insect bioassay which shows 100 %mortality of insect feeding on transgenic lines as compared to control. The present study shows that the transgenic lines produced in this study were resistant not only to insects but also equally good against 1900 ml/acre field spray concentration of glyphosate.

  16. The natural refuge policy for Bt cotton (Gossypium L. in Pakistan – a situation analysis

    Directory of Open Access Journals (Sweden)

    Muhammad Sajjad Ali

    2013-07-01

    Full Text Available Bt cotton (event Cry1Ac was formally commercialized in Pakistan in 2010. However, there has been an increasing trend of planting unauthorized Bt cotton germplasm in farmers' fields since 2003 with a high rate of adoption in the core cotton areas especially in the province Punjab. The transgenic cotton technology has provided the growers with substantial economic benefits and has reduced their dependence on pesticides for pest control, especially against Helicoverpa armigera (Hubner. However, keeping in view the capacity of this insect to develop resistance against novel chemical formulations, it is easily speculated that Bt toxin, too, is no exception. Refuge crop policy for mono transgenic crop events has helped in delaying the rate of resistance evolution in the target pests. Thus, in Pakistan, where planting of structured refuge crops along Bt cotton fields is not mandatory, the effectiveness and durability of Bt cotton technology may decrease due to a number of factors which are discussed in this review.

  17. Influence of foliar application of glycine betaine on gas exchange characteristics of cotton (gossypium Hirsutum L.)

    International Nuclear Information System (INIS)

    Makhdum, M.I.; Din, S.U.

    2007-01-01

    Water is the most limiting factor in cotton production and numerous efforts are being made to improve crop drought tolerance. A field study was conducted with the objectives to determine the effects of different application rates of glycine betaine in field grown cotton at Central Cotton Research Institute, Multan. Four levels of glycine betaine (0.0, 1.0, 3.0 and 6.0 kg ha-1) were applied at three physiological growth stages i.e. at squaring, first flower and peak flowering. Cotton cultivar CIM-448 was used as test crop. Results showed that crop sprayed with glycine betaine at the rate of 6.0 kg ha-1 maintained 120.0, 62.1, 69.7 and 35.5 percent higher net CO/sub 2/ assimilation rate (PN), transpiration rate (E), stomatal resistance (gs) and water use efficiency (PN/E), respectively over that of untreated crop. Crop spayed with glycine betaine at peak flowering stage maintained higher PN, E, gs and PN/E compared to at other stages of growth. (author)

  18. Gamma ray induced diversity in restorer line of cotton (Gossypium Hirsutum)

    International Nuclear Information System (INIS)

    Mehetre, S.S.; Patil, V.R.; Surana, P.P.

    2000-01-01

    Looking to the limitation of very few restorers available in cotton a diversification of available restorer line was undertaken by gamma irradiation. The four hundred individual plants selected from individual M 2 families were crossed with CMS lines. Out of which 12 plants restored fertility in CMS lines and their F 1 's with CMS produced more heterotic hybrids than their checks (control). The results indicated that sufficient variability can be induced with the help of gamma rays and the diversification of restorers is possible within a short period with simultaneous improvement in either one or two characters. (author)

  19. Effect of phosphate solubilizing bacteria on the phosphorus availability and yield of cotton (gossypium)

    International Nuclear Information System (INIS)

    Akhtar, N.; Iqbal, A.; Qureshi, M.A.; Khan, K.H

    2010-01-01

    Phosphate solubilizing bacteria (PSB) and plants have symbiotic relationship, as bacteria provide soluble phosphate for the plants and plants supply root borne carbon compounds which can be metabolized for bacterial growth. PSB solubilize the applied and fixed soil phosphorus resulting in higher crop yield. Intensive cropping has resulted in wide spread deficiency of Phosphorus in our soils and situation is becoming more serious because of a drastic increase in the cost of phosphatic fertilizers. Keeping in view the capabilities of microbes (Bacillus sp.), a field experiment was conducted on cotton at farmer field district Faisalabad in 2008. Effect of PSM (Bacillus spp.) was studied at three phosphorus levels i.e.20, 40 and 60 kg ha-l while N was applied at recommended dose (120 kg ha/sup -1/). Bacillus spp. was applied as seed coating to the cotton crop (Var. BT 121). Recommended plant protection measures were adopted. Results revealed that Bacillus spp. significantly increased the seed cotton yield; number of boll plant-I, boll weight, plant height, GOT (%), staple length, plant P and available P in the soil. Maximum seed cotton yield 4250 kg ha/sup -l/ was obtained with Bacillus inoculation along with 60 kg of P followed by 4162 kg ha/sup -1/ with Bacillus inoculation and 40 kg of P compared with their respective controls i.e.4093 and 3962 kg ha/sup -1/ respectively. Soil P was improved from 8.1 to 9.5 ppm by Bacillus inoculation. Phosphorus in plant matter was also higher (0.39%) as compare with control (0.36%). Rhizosphere soil pH was found slightly decreased (8.12 to 8.0) by Bacillus inoculation compare with control. It is concluded that PSB inoculation not only exerts beneficial effect on crop growth but also enhances the phosphorus concentration in the plant and soil. (author)

  20. Modeling cotton (Gossypium spp) leaves and canopy using computer aided geometric design (CAGD)

    Science.gov (United States)

    The goal of this research is to develop a geometrically accurate model of cotton crop canopies for exploring changes in canopy microenvironment and physiological function with leaf structure. We develop an accurate representation of the leaves, including changes in three-dimensional folding and orie...