Desulfotomaculum spp. and related Gram-positive sulfate-reducing bacteria in deep subsurface environments.

Directory of Open Access Journals (Sweden)

Thomas eAullo

2013-12-01

Full Text Available Gram-positive spore-forming sulfate reducers and particularly members of the genus Desulfotomaculum are commonly found in the subsurface biosphere by culture based and molecular approaches. Due to their metabolic versatility and their ability to persist as endospores. Desulfotomaculum spp. are well adapted for colonizing environments through a slow sedimentation process. Because of their ability to grow autotrophically (H2/CO2 and produce sulfide or acetate, these microorganisms may play key roles in deep lithoautotrophic microbial communities. Available data about Desulfotomaculum spp. and related species from studies carried out from deep freshwater lakes, marine sediments, oligotrophic and organic rich deep geological settings are discussed in this review.

Characterisation of DOC and its relation to the deep terrestrial biosphere

Science.gov (United States)

Vieth, Andrea; Vetter, Alexandra; Sachse, Anke; Horsfield, Brian

2010-05-01

-rich layers like coals and source rocks which may provide carbon sources for the deep biosphere by leaching water soluble organic compounds. We investigated the potential of a series of Eocene-Pleistocene coals, mudstones and sandstones from New Zealand with different maturities (Ro between 0.29 and 0.39) and total organic carbon content (TOC) regarding their potential to release such compounds. The water extraction of these New Zealand coals using Soxhlet apparatus resulted in yields of LMWOA that may feed the local deep terrestrial biosphere over geological periods of time (VIETH et al., 2008). However, the DOC of the water extracts mainly consisted of humic substances. To investigate the effect of thermal maturity of the organic matter as well as the effect of the organic matter type on the extraction yields, we examined additional coal samples (Ro between 0.29 and 0.80) and source rock samples from low to medium maturity (Ro between 0.3 to 1.1). Within our presentation we would like to show the compositional diversity and variability of dissolved organic compounds in natural formation fluids as well as in water extracts from a series of very different lithologies and discuss their effects on the carbon cycling in the deep terrestrial subsurface. References: Andrews, J. N., Youngman, M. J., Goldbrunner, J. E., and Darling, W. G., 1987. The geochemistry of formation waters in the Molasse Basin of Upper Austria. Environmental Geology 10, 43-57. Vieth, A., Mangelsdorf, K., Sykes, R., and Horsfield, B., 2008. Water extraction of coals - potential to estimate low molecular weight organic acids as carbon feedstock for the deep terrestrial biosphere? Organic Geochemistry 39, 985-991.

Rapid Reactivation of Deep Subsurface Microbes in the Presence of C-1 Compounds

Directory of Open Access Journals (Sweden)

Pauliina Rajala

2015-02-01

Full Text Available Microorganisms in the deep biosphere are believed to conduct little metabolic activity due to low nutrient availability in these environments. However, destructive penetration to long-isolated bedrock environments during construction of underground waste repositories can lead to increased nutrient availability and potentially affect the long-term stability of the repository systems, Here, we studied how microorganisms present in fracture fluid from a depth of 500 m in Outokumpu, Finland, respond to simple carbon compounds (C-1 compounds in the presence or absence of sulphate as an electron acceptor. C-1 compounds such as methane and methanol are important intermediates in the deep subsurface carbon cycle, and electron acceptors such as sulphate are critical components of oxidation processes. Fracture fluid samples were incubated in vitro with either methane or methanol in the presence or absence of sulphate as an electron acceptor. Metabolic response was measured by staining the microbial cells with fluorescent dyes that indicate metabolic activity and transcriptional response with RT-qPCR. Our results show that deep subsurface microbes exist in dormant states but rapidly reactivate their transcription and respiration systems in the presence of C-1 substrates, particularly methane. Microbial activity was further enhanced by the addition of sulphate as an electron acceptor. Sulphate- and nitrate-reducing microbes were particularly responsive to the addition of C-1 compounds and sulphate. These taxa are common in deep biosphere environments and may be affected by conditions disturbed by bedrock intrusion, as from drilling and excavation for long-term storage of hazardous waste.

The Search for Sustainable Subsurface Habitats on Mars, and the Sampling of Impact Ejecta

Directory of Open Access Journals (Sweden)

Paula Lindgren

2010-07-01

Full Text Available On Earth, the deep subsurface biosphere of both the oceanic and the continental crust is well known for surviving harsh conditions and environments characterized by high temperatures, high pressures, extreme pHs, and the absence of sunlight. The microorganisms of the terrestrial deep biosphere have an excellent capacity for adapting to changing geochemistry, as the alteration of the crust proceeds and the conditions of their habitats slowly change. Despite an almost complete isolation from surface conditions and the surface biosphere, the deep biosphere of the crustal rocks has endured over geologic time. This indicates that the deep biosphere is a self-sufficient system, independent of the global events that occur at the surface, such as impacts, glaciations, sea level fluctuations, and climate changes. With our sustainable terrestrial subsurface biosphere in mind, the subsurface on Mars has often been suggested as the most plausible place to search for fossil Martian life, or even present Martian life. Since the Martian surface is more or less sterile, subsurface settings are the only place on Mars where life could have been sustained over geologic time. To detect a deep biosphere in the Martian basement, drilling is a requirement. However, near future Mars sample return missions are limited by the mission’s payload, which excludes heavy drilling equipment and restrict the missions to only dig the topmost meter of the Martian soil. Therefore, the sampling and analysis of Martian impact ejecta has been suggested as a way of accessing the deeper Martian subsurface without using heavy drilling equipment. Impact cratering is a natural geological process capable of excavating and exposing large amounts of rock material from great depths up to the surface. Several studies of terrestrial impact deposits show the preservation of pre-impact biosignatures, such as fossilized organisms and chemical biological markers. Therefore, if the Martian

Exploring frontiers of the deep biosphere through scientific ocean drilling

Science.gov (United States)

Inagaki, F.; D'Hondt, S.; Hinrichs, K. U.

2015-12-01

Since the first deep biosphere-dedicated Ocean Drilling Program (ODP) Leg 201 using the US drill ship JOIDES Resolution in 2002, scientific ocean drilling has offered unique opportunities to expand our knowledge of the nature and extent of the deep biosphere. The latest estimate of the global subseafloor microbial biomass is ~1029cells, accounting for 4 Gt of carbon and ~1% of the Earth's total living biomass. The subseafloor microbial communities are evolutionarily diverse and their metabolic rates are extraordinarily slow. Nevertheless, accumulating activity most likely plays a significant role in elemental cycles over geological time. In 2010, during Integrated Ocean Drilling Program (IODP) Expedition 329, the JOIDES Resolutionexplored the deep biosphere in the open-ocean South Pacific Gyre—the largest oligotrophic province on our planet. During Expedition 329, relatively high concentrations of dissolved oxygen and significantly low biomass of microbial populations were observed in the entire sediment column, indicating that (i) there is no limit to life in open-ocean sediment and (ii) a significant amount of oxygen reaches through the sediment to the upper oceanic crust. This "deep aerobic biosphere" inhabits the sediment throughout up to ~37 percent of the world's oceans. The remaining ~63 percent of the oceans is comprised of higher productivity areas that contain the "deep anaerobic biosphere". In 2012, during IODP Expedition 337, the Japanese drill ship Chikyu explored coal-bearing sediments down to 2,466 meters below the seafloor off the Shimokita Peninsula, Japan. Geochemical and microbiological analyses consistently showed the occurrence of methane-producing communities associated with the coal beds. Cell concentrations in deep sediments were notably lower than those expected from the global regression line, implying that the bottom of the deep biosphere is approached in these beds. Taxonomic composition of the deep coal-bearing communities profoundly

Active microbial community structure of deep subsurface sediments within Baltic Sea Basin

Science.gov (United States)

Reese, B. K.; Zinke, L.; Carvalho, G.; Lloyd, K. G.; Marshall, I.; Shumaker, A.; Amend, J.

2014-12-01

The Baltic Sea Basin (BSB) is a unique depositional setting that has experienced periods of glaciation and deglaciation as a result of climatic fluctuations over past tens of thousands of years. This has resulted in laminated sediments formed during periods with strong permanent salinity stratification. The high sedimentation rates make this an ideal setting to understand the microbial structure of a deep biosphere community in a relatively high carbon, and thus high-energy environment, compared to other deep subsurface sites. Samples were collected through scientific drilling during the International Ocean Discovery Program (IODP) Expedition 347 on board the Greatship Manisha, September-November 2013. We examined the active microbial community structure using the 16S rRNA gene transcript and active functional genes through metatranscriptome sequencing. Major biogeochemical shifts have been observed in response to the depositional history between the limnic, brackish, and marine phases. The active microbial community structure in the BSB is diverse and reflective of the unique changes in the geochemical profile. These data further refine our understanding of the existence life in the deep subsurface and the survival mechanisms required for this extreme environment.

The Mojave vadose zone: a subsurface biosphere analogue for Mars.

Science.gov (United States)

Abbey, William; Salas, Everett; Bhartia, Rohit; Beegle, Luther W

2013-07-01

If life ever evolved on the surface of Mars, it is unlikely that it would still survive there today, but as Mars evolved from a wet planet to an arid one, the subsurface environment may have presented a refuge from increasingly hostile surface conditions. Since the last glacial maximum, the Mojave Desert has experienced a similar shift from a wet to a dry environment, giving us the opportunity to study here on Earth how subsurface ecosystems in an arid environment adapt to increasingly barren surface conditions. In this paper, we advocate studying the vadose zone ecosystem of the Mojave Desert as an analogue for possible subsurface biospheres on Mars. We also describe several examples of Mars-like terrain found in the Mojave region and discuss ecological insights that might be gained by a thorough examination of the vadose zone in these specific terrains. Examples described include distributary fans (deltas, alluvial fans, etc.), paleosols overlain by basaltic lava flows, and evaporite deposits.

The Potential for Low-Temperature Abiotic Hydrogen Generation and a Hydrogen-Driven Deep Biosphere

Science.gov (United States)

Huang, Shanshan; Thorseth, Ingunn H.

2011-01-01

Abstract The release and oxidation of ferrous iron during aqueous alteration of the mineral olivine is known to reduce aqueous solutions to such extent that molecular hydrogen, H2, forms. H2 is an efficient energy carrier and is considered basal to the deep subsurface biosphere. Knowledge of the potential for H2 generation is therefore vital to understanding the deep biosphere on Earth and on extraterrestrial bodies. Here, we provide a review of factors that may reduce the potential for H2 generation with a focus on systems in the core temperature region for thermophilic to hyperthermophilic microbial life. We show that aqueous sulfate may inhibit the formation of H2, whereas redox-sensitive compounds of carbon and nitrogen are unlikely to have significant effect at low temperatures. In addition, we suggest that the rate of H2 generation is proportional to the dissolution rate of olivine and, hence, limited by factors such as reactive surface areas and the access of water to fresh surfaces. We furthermore suggest that the availability of water and pore/fracture space are the most important factors that limit the generation of H2. Our study implies that, because of large heat flows, abundant olivine-bearing rocks, large thermodynamic gradients, and reduced atmospheres, young Earth and Mars probably offered abundant systems where microbial life could possibly have emerged. Key Words: Serpentinization—Olivine—Hydrogen—Deep biosphere—Water—Mars. Astrobiology 11, 711–724. PMID:21923409

Deep Subsurface Microbial Communities Shaped by the Chicxulub Impactor

Science.gov (United States)

Cockell, C. S.; Coolen, M.; Schaefer, B.; Grice, K.; Gulick, S. P. S.; Morgan, J. V.; Kring, D. A.; Osinski, G.

2017-12-01

. These data show that the deep biosphere can preserve the imprint of catastrophe long after these events. In this case, the distribution of deep subsurface microbial communities reflects the lithological sequence established during the substantial impact-induced geological rearrangements that occurred in the first hours of the Cenozoic.

Exploration of a Subsurface Biosphere in a Volcanic Massive Sulfide: Results of the Mars Analog Rio Tinto Drilling Experiment

Science.gov (United States)

Stoker, C. R.; Stevens, T.; Amils, R.; Fernandez, D.

2005-12-01

Biological systems on Earth require three key ingredients-- liquid water, an energy source, and a carbon source, that are found in very few extraterrestrial environments. Previous examples of independent subsurface ecosystems have been found only in basalt aquifers. Such lithotrophic microbial ecosystems (LME) have been proposed as models for steps in the early evolution of Earth's biosphere and for potential biospheres on other planets where the surface is uninhabitable, such as Mars and Europa.. The Mars Analog Rio Tinto Experiment (MARTE) has searched in a volcanic massive sulfide deposit in Rio Tinto Spain for a subsurface biosphere capable of living without sunlight or oxygen and found a subsurface ecosystem driven by the weathering of the massive sulfide deposit (VMS) in which the rock matrix provides sufficient resources to support microbial metabolism, including the vigorous production of H2 by water-rock interactions. Microbial production of methane and sulfate occurred in the sulfide orebody and microbial production of methane and hydrogen sulfide continued in an anoxic plume downgradient from the sulfide ore. Organic carbon concentrations in the parent rock were too low to support microbes. The Rio Tinto system thus represents a new type of subsurface ecosystem with strong relevance for exobiological studies. Commercial drilling was used to reach the aquifer system at 100 m depth and conventional laboratory techniques were used to identify and characterize the biosphere. Then, the life search strategy that led to successful identification of this biosphere was applied to the development of a robotic drilling, core handling, inspection, subsampling, and life detection system built on a prototype planetary lander that was deployed in Rio Tinto Spain in September 2005 to test the capability of a robotic drilling system to search for subsurface life. A remote science team directed the simulation and analyzed the data from the MARTE robotic drill. The results

Physical and chemical controls on habitats for life in the deep subsurface beneath continents and ice

Science.gov (United States)

Parnell, John; McMahon, Sean

2016-01-01

The distribution of life in the continental subsurface is likely controlled by a range of physical and chemical factors. The fundamental requirements are for space to live, carbon for biomass and energy for metabolic activity. These are inter-related, such that adequate permeability is required to maintain a supply of nutrients, and facies interfaces invite colonization by juxtaposing porous habitats with nutrient-rich mudrocks. Viable communities extend to several kilometres depth, diminishing downwards with decreasing porosity. Carbon is contributed by recycling of organic matter originally fixed by photosynthesis, and chemoautotrophy using crustal carbon dioxide and methane. In the shallow crust, the recycled component predominates, as processed kerogen or hydrocarbons, but abiotic carbon sources may be significant in deeper, metamorphosed crust. Hydrogen to fuel chemosynthesis is available from radiolysis, mechanical deformation and mineral alteration. Activity in the subcontinental deep biosphere can be traced through the geological record back to the Precambrian. Before the colonization of the Earth's surface by land plants, a geologically recent event, subsurface life probably dominated the planet's biomass. In regions of thick ice sheets the base of the ice sheet, where liquid water is stable and a sediment layer is created by glacial erosion, can be regarded as a deep biosphere habitat. This environment may be rich in dissolved organic carbon and nutrients accumulated from dissolving ice, and from weathering of the bedrock and the sediment layer. PMID:26667907

Acetogenesis in the energy-starved deep biosphere - a paradox?

DEFF Research Database (Denmark)

Lever, Mark

2012-01-01

Under anoxic conditions in sediments, acetogens are often thought to be outcompeted by microorganisms performing energetically more favorable metabolic pathways, such as sulfate reduction or methanogenesis. Recent evidence from deep subseafloor sediments suggesting acetogenesis in the presence of...... to be taken into account to understand microbial survival in the energy-depleted deep biosphere....

Molecular analysis of deep subsurface bacteria

International Nuclear Information System (INIS)

Jimenez Baez, L.E.

1989-09-01

Deep sediments samples from site C10a, in Appleton, and sites, P24, P28, and P29, at the Savannah River Site (SRS), near Aiken, South Carolina were studied to determine their microbial community composition, DNA homology and mol %G+C. Different geological formations with great variability in hydrogeological parameters were found across the depth profile. Phenotypic identification of deep subsurface bacteria underestimated the bacterial diversity at the three SRS sites, since bacteria with the same phenotype have different DNA composition and less than 70% DNA homology. Total DNA hybridization and mol %G+C analysis of deep sediment bacterial isolates suggested that each formation is comprised of different microbial communities. Depositional environment was more important than site and geological formation on the DNA relatedness between deep subsurface bacteria, since more 70% of bacteria with 20% or more of DNA homology came from the same depositional environments. Based on phenotypic and genotypic tests Pseudomonas spp. and Acinetobacter spp.-like bacteria were identified in 85 million years old sediments. This suggests that these microbial communities might have been adapted during a long period of time to the environmental conditions of the deep subsurface

Fungal and Prokaryotic Activities in the Marine Subsurface Biosphere at Peru Margin and Canterbury Basin Inferred from RNA-Based Analyses and Microscopy.

Science.gov (United States)

Pachiadaki, Maria G; Rédou, Vanessa; Beaudoin, David J; Burgaud, Gaëtan; Edgcomb, Virginia P

2016-01-01

The deep sedimentary biosphere, extending 100s of meters below the seafloor harbors unexpected diversity of Bacteria, Archaea, and microbial eukaryotes. Far less is known about microbial eukaryotes in subsurface habitats, albeit several studies have indicated that fungi dominate microbial eukaryotic communities and fungal molecular signatures (of both yeasts and filamentous forms) have been detected in samples as deep as 1740 mbsf. Here, we compare and contrast fungal ribosomal RNA gene signatures and whole community metatranscriptomes present in sediment core samples from 6 and 95 mbsf from Peru Margin site 1229A and from samples from 12 and 345 mbsf from Canterbury Basin site U1352. The metatranscriptome analyses reveal higher relative expression of amino acid and peptide transporters in the less nutrient rich Canterbury Basin sediments compared to the nutrient rich Peru Margin, and higher expression of motility genes in the Peru Margin samples. Higher expression of genes associated with metals transporters and antibiotic resistance and production was detected in Canterbury Basin sediments. A poly-A focused metatranscriptome produced for the Canterbury Basin sample from 345 mbsf provides further evidence for active fungal communities in the subsurface in the form of fungal-associated transcripts for metabolic and cellular processes, cell and membrane functions, and catalytic activities. Fungal communities at comparable depths at the two geographically separated locations appear dominated by distinct taxa. Differences in taxonomic composition and expression of genes associated with particular metabolic activities may be a function of sediment organic content as well as oceanic province. Microscopic analysis of Canterbury Basin sediment samples from 4 and 403 mbsf produced visualizations of septate fungal filaments, branching fungi, conidiogenesis, and spores. These images provide another important line of evidence supporting the occurrence and activity of fungi in

Potential for hydrogen-oxidizing chemolithoautotrophic and diazotrophic populations to initiate biofilm formation in oligotrophic, deep terrestrial subsurface waters.

Science.gov (United States)

Wu, Xiaofen; Pedersen, Karsten; Edlund, Johanna; Eriksson, Lena; Åström, Mats; Andersson, Anders F; Bertilsson, Stefan; Dopson, Mark

2017-03-23

Deep terrestrial biosphere waters are separated from the light-driven surface by the time required to percolate to the subsurface. Despite biofilms being the dominant form of microbial life in many natural environments, they have received little attention in the oligotrophic and anaerobic waters found in deep bedrock fractures. This study is the first to use community DNA sequencing to describe biofilm formation under in situ conditions in the deep terrestrial biosphere. In this study, flow cells were attached to boreholes containing either "modern marine" or "old saline" waters of different origin and degree of isolation from the light-driven surface of the earth. Using 16S rRNA gene sequencing, we showed that planktonic and attached populations were dissimilar while gene frequencies in the metagenomes suggested that hydrogen-fed, carbon dioxide- and nitrogen-fixing populations were responsible for biofilm formation across the two aquifers. Metagenome analyses further suggested that only a subset of the populations were able to attach and produce an extracellular polysaccharide matrix. Initial biofilm formation is thus likely to be mediated by a few bacterial populations which were similar to Epsilonproteobacteria, Deltaproteobacteria, Betaproteobacteria, Verrucomicrobia, and unclassified bacteria. Populations potentially capable of attaching to a surface and to produce extracellular polysaccharide matrix for attachment were identified in the terrestrial deep biosphere. Our results suggest that the biofilm populations were taxonomically distinct from the planktonic community and were enriched in populations with a chemolithoautotrophic and diazotrophic metabolism coupling hydrogen oxidation to energy conservation under oligotrophic conditions.

High-pressure hydrogen respiration in hydrothermal vent samples from the deep biosphere

Science.gov (United States)

Morgan-Smith, D.; Schrenk, M. O.

2013-12-01

Cultivation of organisms from the deep biosphere has met with many challenges, chief among them the ability to replicate this extreme environment in a laboratory setting. The maintenance of in situ pressure levels, carbon sources, and gas concentrations are important, intertwined factors which may all affect the growth of subsurface microorganisms. Hydrogen in particular is of great importance in hydrothermal systems, but in situ hydrogen concentrations are largely disregarded in attempts to culture from these sites. Using modified Hungate-type culture tubes (Bowles et al. 2011) within pressure-retaining vessels, which allow for the dissolution of higher concentrations of gas than is possible with other culturing methods, we have incubated hydrothermal chimney and hydrothermally-altered rock samples from the Lost City and Mid-Cayman Rise hydrothermal vent fields. Hydrogen concentrations up to 15 mmol/kg have been reported from Lost City (Kelley et al. 2005), but data are not yet available from the recently-discovered Mid-Cayman site, and the elevated concentration of 30 mmol/kg is being used in all incubations. We are using a variety of media types to enrich for various metabolic pathways including iron and sulfur reduction under anoxic or microaerophilic conditions. Incubations are being carried out at atmospheric (0.1 MPa), in situ (9, 23, or 50 MPa, depending on site), and elevated (50 MPa) pressure levels. Microbial cell concentrations, taxonomic diversity, and metabolic activities are being monitored during the course of these experiments. These experiments will provide insight into the relationships between microbial activities, pressure, and gas concentrations typical of deep biosphere environments. Results will inform further culturing studies from both fresh and archived samples. References cited: Bowles, M.W., Samarkin, V.A., Joye, S.B. 2011. Improved measurement of microbial activity in deep-sea sediments at in situ pressure and methane concentration

Analysis of Low-Biomass Microbial Communities in the Deep Biosphere.

Science.gov (United States)

Morono, Y; Inagaki, F

2016-01-01

Over the past few decades, the subseafloor biosphere has been explored by scientific ocean drilling to depths of about 2.5km below the seafloor. Although organic-rich anaerobic sedimentary habitats in the ocean margins harbor large numbers of microbial cells, microbial populations in ultraoligotrophic aerobic sedimentary habitats in the open ocean gyres are several orders of magnitude less abundant. Despite advances in cultivation-independent molecular ecological techniques, exploring the low-biomass environment remains technologically challenging, especially in the deep subseafloor biosphere. Reviewing the historical background of deep-biosphere analytical methods, the importance of obtaining clean samples and tracing contamination, as well as methods for detecting microbial life, technological aspects of molecular microbiology, and detecting subseafloor metabolic activity will be discussed. Copyright © 2016 Elsevier Inc. All rights reserved.

Clays and Carbonates in a Groundwater-Fed 3.8 Ga Martian Lake: Insights to Subsurface Habitability on Mars

Science.gov (United States)

Michalski, Joseph; Niles, Paul

2015-01-01

On Earth, the deep biosphere remains a largely unexplored, but clearly important carbon reservoir. Results from some uplifted central peaks in craters on Mars indicate that substantial carbon was also present at depth and might have helped sustain a deep biosphere. In fact, many factors relevant to deep biosphere habitability are more favorable on Mars than on Earth (e.g. porosity of the crust, geothermal gradient). Future exploration of Mars should include landing sites where materials have been exhumed from depth by meteor impact or basins where subsurface fluids have emerged, carrying clues to subsurface habitability. One of the most astrobiologically interesting sites on Mars McLaughlin Crater, a 93 km-diameter impact crater that formed approximately 4 b.y. ago. On the floor of the crater is a stratigraphic section of subhorizontal, layered sedimentary rocks with strong spectroscopic evidence for Fe-rich clay minerals and Mg-rich carbonates, which we interpret as ancient lacustrine deposits. The fluids that formed these materials likely originated in the subsurface, based on the paucity of channels leading into the crater basin and the fact that this is one of the deepest basins on Mars - a good candidate to have experienced upwelling of subsurface fluids. Therefore, the deposits within McLaughlin crater provide insight into subsurface processes on Mars. In this presentation, we will discuss the habitability of the martian subsurface as well as the geology of McLaughlin Crater and the possibility to detect biomarkers at that site with a future landed mission.

Deep Biosphere Secrets of the Mediterranean Salt Giant

Science.gov (United States)

Aloisi, Giovanni; Lugli, Stefano; McGenity, Terry; Kuroda, Junichiro; Takai, Ken; Treude, Tina; Camerlenghi, Angelo

2015-04-01

One component of the IODP multi-platform drilling proposal called DREAM (Deep-Sea Record of Mediterranean Messisnian Events), plans to investigate the deep biosphere associated to the Messinian Salinity Crisis (MSC) Salt Giant. We propose that the MSC Salt Giant, because of the variety of chemical environments it produces, has the potential to harbour an unprecedented diversity of microbial life with exceptional metabolic activity. Gypsum and anhydrite deposits provide a virtually unlimited source of sulphate at depths where oxidants are a rarity in other sedimentary environments. When reduced organic carbon comes into contact with these minerals there is the potential for a dynamic deep biosphere community of sulphate reducers to develop, with implications for sedimentary biogeochemical cycles and the souring of cruide oil. But the thickness of the Messinian evaporites and the range of chemical environments it harbours poses fundamental questions: will the interaction of several extreme conditions of temperature, salinity, pressure and chemical composition limit the ability of microbes to take advantage of such favourable thermodynamic conditions? And has such a diverse set of physical and chemical environments fostered microbal diversity, rather than phylogenetic specialization, as recent research into deep Mediterranean brine systems seems to indicate ? Over three kilometres in thickness, approaching the known temperature limits of life and with fluids precipitating carbonate, sulphate, halite and potash salts, microbes living within and around the MSC Salt Giant will be subject to the most exotic combinations of extremes, and have likely evolved yet unknown adaptations. Gypsum and Halite crystals contain fluid inclusions that are a micro-habitat in which microbes survive for tens of thousands, to possibly millions, of years, posing the fundamental question of cells devoting nearly all of their energy flow to somatic maintenance needs, rather than growth and

Cultivation Of Deep Subsurface Microbial Communities

Science.gov (United States)

Obrzut, Natalia; Casar, Caitlin; Osburn, Magdalena R.

2018-01-01

The potential habitability of surface environments on other planets in our solar system is limited by exposure to extreme radiation and desiccation. In contrast, subsurface environments may offer protection from these stressors and are potential reservoirs for liquid water and energy that support microbial life (Michalski et al., 2013) and are thus of interest to the astrobiology community. The samples used in this project were extracted from the Deep Mine Microbial Observatory (DeMMO) in the former Homestake Mine at depths of 800 to 2000 feet underground (Osburn et al., 2014). Phylogenetic data from these sites indicates the lack of cultured representatives within the community. We used geochemical data to guide media design to cultivate and isolate organisms from the DeMMO communities. Media used for cultivation varied from heterotrophic with oxygen, nitrate or sulfate to autotrophic media with ammonia or ferrous iron. Environmental fluid was used as inoculum in batch cultivation and strains were isolated via serial transfers or dilution to extinction. These methods resulted in isolating aerobic heterotrophs, nitrate reducers, sulfate reducers, ammonia oxidizers, and ferric iron reducers. DNA sequencing of these strains is underway to confirm which species they belong to. This project is part of the NASA Astrobiology Institute Life Underground initiative to detect and characterize subsurface microbial life; by characterizing the intraterrestrials, the life living deep within Earth’s crust, we aim to understand the controls on how and where life survives in subsurface settings. Cultivation of terrestrial deep subsurface microbes will provide insight into the survival mechanisms of intraterrestrials guiding the search for these life forms on other planets.

Stable, geochemically mediated biospheres in the Deep Mine Microbial Observatory, SD, USA

Science.gov (United States)

Osburn, M. R.; Casar, C. P.; Kruger, B.; Flynn, T. M.

2017-12-01

The terrestrial subsurface is a vast reservoir of life, hosting diverse microbial ecosystems with varying levels of connectivity to surface inputs. Understanding long term ecosystem dynamics within the subsurface biosphere is very challenging due to limitations in accessibility, sample availability, and slow microbial growth rates. The establishment of the Deep Mine Microbial Observatory (DeMMO) at the Sanford Underground Research Facility, SD, USA has allowed for bimonthly sampling for nearly two years at six sites spanning 250 to 1500 m below the surface. Here we present a time-resolved analysis of the geomicrobiology of the six DeMMO sites, which have been created from legacy mine boreholes modified to allow for controlled sampling. Our interdisciplinary approach includes analysis of passively draining fracture fluid for aqueous and gas geochemistry, DNA sequencing, microscopy, and isotopic measurements of organic and inorganic substrates. Fluid geochemistry varies significantly between sites, but is relatively stable over time for a given site, even through significant external perturbations such as drilling and installation of permanent sampling devices into the boreholes. The fluid-hosted microbial diversity follows these trends, with consistent populations present at each site through time, even through drilling events. For instance, the shallowest site (DeMMO 1) consistently hosts >30% uncharacterized phyla and >25% Omnitrophica whereas the deepest site (DeMMO 6) is dominated by Firmicutes and Bacterioidetes. Microbial diversity appears to respond to the availability of energy sources such as organic carbon, sulfate, sulfide, hydrogen, and iron. Carbon isotopic measurements reveal closed system behavior with significant recycling of organic carbon into the DIC pool. Together these observations suggest DeMMO hosts isolated subsurface microbial populations adapted to local geochemistry that are stable on yearlong timescales.

Putting the Deep Biosphere and Gas Hydrates on the Map

Science.gov (United States)

Sikorski, Janelle J.; Briggs, Brandon R.

2016-01-01

Microbial processes in the deep biosphere affect marine sediments, such as the formation of gas hydrate deposits. Gas hydrate deposits offer a large source of natural gas with the potential to augment energy reserves and affect climate and seafloor stability. Despite the significant interdependence between life and geology in the ocean, coverage…

Biogenic Carbon on Mars: A Subsurface Chauvinistic Viewpoint

Science.gov (United States)

Onstott, T. C.; Lau, C. Y. M.; Magnabosco, C.; Harris, R.; Chen, Y.; Slater, G.; Sherwood Lollar, B.; Kieft, T. L.; van Heerden, E.; Borgonie, G.; Dong, H.

2015-12-01

A review of 150 publications on the subsurface microbiology of the continental subsurface provides ~1,400 measurements of cellular abundances down to 4,800 meter depth. These data suggest that the continental subsurface biomass is comprised of ~1016-17 grams of carbon, which is higher than the most recent estimates of ~1015 grams of carbon (1 Gt) for the marine deep biosphere. If life developed early in Martian history and Mars sustained an active hydrological cycle during its first 500 million years, then is it possible that Mars could have developed a subsurface biomass of comparable size to that of Earth? Such a biomass would comprise a much larger fraction of the total known Martian carbon budget than does the subsurface biomass on Earth. More importantly could a remnant of this subsurface biosphere survive to the present day? To determine how sustainable subsurface life could be in isolation from the surface we have been studying subsurface fracture fluids from the Precambrian Shields in South Africa and Canada. In these environments the energetically efficient and deeply rooted acetyl-CoA pathway for carbon fixation plays a central role for chemolithoautotrophic primary producers that form the base of the biomass pyramid. These primary producers appear to be sustained indefinitely by H2 generated through serpentinization and radiolytic reactions. Carbon isotope data suggest that in some subsurface locations a much larger population of secondary consumers are sustained by the primary production of biogenic CH4 from a much smaller population of methanogens. These inverted biomass and energy pyramids sustained by the cycling of CH4 could have been and could still be active on Mars. The C and H isotopic signatures of Martian CH4 remain key tools in identifying potential signatures of an extant Martian biosphere. Based upon our results to date cavity ring-down spectroscopic technologies provide an option for making these measurements on future rover missions.

Bacterial communities associated with subsurface geochemical processes in continental serpentinite springs.

Science.gov (United States)

Brazelton, William J; Morrill, Penny L; Szponar, Natalie; Schrenk, Matthew O

2013-07-01

Reactions associated with the geochemical process of serpentinization can generate copious quantities of hydrogen and low-molecular-weight organic carbon compounds, which may provide energy and nutrients to sustain subsurface microbial communities independently of the photosynthetically supported surface biosphere. Previous microbial ecology studies have tested this hypothesis in deep sea hydrothermal vents, such as the Lost City hydrothermal field. This study applied similar methods, including molecular fingerprinting and tag sequencing of the 16S rRNA gene, to ultrabasic continental springs emanating from serpentinizing ultramafic rocks. These molecular surveys were linked with geochemical measurements of the fluids in an interdisciplinary approach designed to distinguish potential subsurface organisms from those derived from surface habitats. The betaproteobacterial genus Hydrogenophaga was identified as a likely inhabitant of transition zones where hydrogen-enriched subsurface fluids mix with oxygenated surface water. The Firmicutes genus Erysipelothrix was most strongly correlated with geochemical factors indicative of subsurface fluids and was identified as the most likely inhabitant of a serpentinization-powered subsurface biosphere. Both of these taxa have been identified in multiple hydrogen-enriched subsurface habitats worldwide, and the results of this study contribute to an emerging biogeographic pattern in which Betaproteobacteria occur in near-surface mixing zones and Firmicutes are present in deeper, anoxic subsurface habitats.

Deep-biosphere consortium of fungi and prokaryotes in Eocene subseafloor basalts.

Science.gov (United States)

Bengtson, S; Ivarsson, M; Astolfo, A; Belivanova, V; Broman, C; Marone, F; Stampanoni, M

2014-11-01

The deep biosphere of the subseafloor crust is believed to contain a significant part of Earth's biomass, but because of the difficulties of directly observing the living organisms, its composition and ecology are poorly known. We report here a consortium of fossilized prokaryotic and eukaryotic micro-organisms, occupying cavities in deep-drilled vesicular basalt from the Emperor Seamounts, Pacific Ocean, 67.5 m below seafloor (mbsf). Fungal hyphae provide the framework on which prokaryote-like organisms are suspended like cobwebs and iron-oxidizing bacteria form microstromatolites (Frutexites). The spatial inter-relationships show that the organisms were living at the same time in an integrated fashion, suggesting symbiotic interdependence. The community is contemporaneous with secondary mineralizations of calcite partly filling the cavities. The fungal hyphae frequently extend into the calcite, indicating that they were able to bore into the substrate through mineral dissolution. A symbiotic relationship with chemoautotrophs, as inferred for the observed consortium, may be a pre-requisite for the eukaryotic colonization of crustal rocks. Fossils thus open a window to the extant as well as the ancient deep biosphere. © 2014 The Authors. Geobiology Published by John Wiley & Sons Ltd.

Aseptically Sampled Organics in Subsurface Rocks From the Mars Analog Rio Tinto Experiment: An Analog For The Search for Deep Subsurface Life on Mars.}

Science.gov (United States)

Bonaccorsi, R.; Stoker, C. R.

2005-12-01

The subsurface is the key environment for searching for life on planets lacking surface life. Subsurface ecosystems are of great relevance to astrobiology including the search for past/present life on Mars. The surface of Mars has conditions preventing current life but the subsurface might preserve organics and even host some life [1]. The Mars-Analog-Rio-Tinto-Experiment (MARTE) is performing a simulation of a Mars drilling experiment. This comprises conventional and robotic drilling of cores in a volcanically-hosted-massive-pyrite deposit [2] from the Iberian Pyritic Belt (IBP) and life detection experiments applying anti-contamination protocols (e.g., ATP Luminometry assay). The RT is considered an important analog of the Sinus Meridiani site on Mars and an ideal model analog for a deep subsurface Martian environment. Former results from MARTE suggest the existence of a relatively complex subsurface life including aerobic and anaerobic chemoautotrophs and strict anaerobic methanogens sustained by Fe and S minerals in anoxic conditions. A key requirement for the analysis of a subsurface sample on Mars is a set of simple tests that can help determine if the sample contains organic material of biological origin, and its potential for retaining definitive biosignatures. We report here on the presence of bulk organic matter Corg (0.03-0.05 Wt%), and Ntot (0.01-0.04 Wt%) and amount of measured ATP (Lightning MVP, Biocontrol) in weathered rocks (tuffs, gossan, pyrite stockwork from Borehole #8; >166m). This provides key insight on the type of trophic system sustaining the subsurface biosphere (i.e., heterotrophs vs. autotrophs) at RT. ATP data (Relative-Luminosity-Units, RLU) provide information on possible contamination and distribution of viable biomass with core depth (BH#8, and BH#7, ~3m). Avg. 153 RLU, i.e., surface vs. center of core, suggest that cleaness/sterility can be maintained when using a simple sterile protocol under field conditions. Results from this

Turnover of microbial lipids in the deep biosphere and growth of benthic archaeal populations.

Science.gov (United States)

Xie, Sitan; Lipp, Julius S; Wegener, Gunter; Ferdelman, Timothy G; Hinrichs, Kai-Uwe

2013-04-09

Deep subseafloor sediments host a microbial biosphere with unknown impact on global biogeochemical cycles. This study tests previous evidence based on microbial intact polar lipids (IPLs) as proxies of live biomass, suggesting that Archaea dominate the marine sedimentary biosphere. We devised a sensitive radiotracer assay to measure the decay rate of ([(14)C]glucosyl)-diphytanylglyceroldiether (GlcDGD) as an analog of archaeal IPLs in continental margin sediments. The degradation kinetics were incorporated in model simulations that constrained the fossil fraction of subseafloor IPLs and rates of archaeal turnover. Simulating the top 1 km in a generic continental margin sediment column, we estimated degradation rate constants of GlcDGD being one to two orders of magnitude lower than those of bacterial IPLs, with half-lives of GlcDGD increasing with depth to 310 ky. Given estimated microbial community turnover times of 1.6-73 ky in sediments deeper than 1 m, 50-96% of archaeal IPLs represent fossil signals. Consequently, previous lipid-based estimates of global subseafloor biomass probably are too high, and the widely observed dominance of archaeal IPLs does not rule out a deep biosphere dominated by Bacteria. Reverse modeling of existing concentration profiles suggest that archaeal IPL synthesis rates decline from around 1,000 pg⋅mL(-1) sediment⋅y(-1) at the surface to 0.2 pg⋅mL(-1)⋅y(-1) at 1 km depth, equivalent to production of 7 × 10(5) to 140 archaeal cells⋅mL(-1) sediment⋅y(-1), respectively. These constraints on microbial growth are an important step toward understanding the relationship between the deep biosphere and the carbon cycle.

Ecology, physiology, and phylogeny of deep subsurface Sphingomonas sp.

Science.gov (United States)

Fredrickson, J K; Balkwill, D L; Romine, M F; Shi, T

1999-10-01

Several new species of the genus Sphingomonas including S. aromaticivorans, S. stygia, and S. subterranea that have the capacity for degrading a broad range of aromatic compounds including toluene, naphthalene, xylenes, p-cresol, fluorene, biphenyl, and dibenzothiophene, were isolated from deeply-buried (>200 m) sediments of the US Atlantic coastal plain (ACP). In S. aromaticivorans F199, many of the genes involved in the catabolism of these aromatic compounds are encoded on a 184-kb conjugative plasmid; some of the genes involved in aromatic catabolism are plasmid-encoded in the other strains as well. Members of the genus Sphingomonas were common among aerobic heterotrophic bacteria cultured from ACP sediments and have been detected in deep subsurface environments elsewhere. The major source of organic carbon for heterotrophic metabolism in ACP deep aquifers is lignite that originated from plant material buried with the sediments. We speculate that the ability of the subsurface Sphingomonas strains to degrade a wide array of aromatic compounds represents an adaptation for utilization of sedimentary lignite. These and related subsurface Sphingomonas spp may play an important role in the transformation of sedimentary organic carbon in the aerobic and microaerobic regions of the deep aquifers of the ACP.

Archaeal Viruses Contribute to the Novel Viral Assemblage Inhabiting Oceanic, Basalt-Hosted Deep Subsurface Crustal Fluids

Science.gov (United States)

Nigro, O. D.; Rappe, M. S.; Jungbluth, S.; Lin, H. T.; Steward, G.

2015-12-01

Fluids contained in the basalt-hosted deep subsurface of the world's oceans represent one of the most inaccessible and understudied biospheres on earth. Recent improvements in sampling infrastructure have allowed us to collect large volumes of crustal fluids (~104 L) from Circulation Obviation Retrofit Kits (CORKs) placed in boreholes located on the eastern flank of the Juan de Fuca Ridge (JdFR). We detected viruses within these fluids by TEM and epifluorescence microscopy in samples collected from 2010 to 2014. Viral abundance, determined by epifluorescence counts, indicated that concentrations of viruses in subsurface basement fluids (~105 ml-1) are lower than the overlying seawater, but are higher in abundance than microbial cells in the same samples. Analysis of TEM images revealed distinct viral morphologies (rod and spindle-shaped) that resemble the morphologies of viral families infecting archaea. There are very few, if any, direct observations of these viral morphologies in marine samples, although they have been observed in enrichment cultures and their signature genes detected in metagenomic studies from hydrothermal vents and marine sediments. Analysis of metagenomes from the JdFR crustal fluids revealed sequences with homology to archaeal viruses from the rudiviridae, bicaudaviridae and fuselloviridae. Prokaryotic communities in fluids percolating through the basaltic basement rock of the JdFR flank are distinct from those inhabiting the overlying sediments and seawater. Similarly, our data support the idea that the viral assemblage in these fluids is distinct from viral assemblages in other marine and terrestrial aquatic environments. Our data also suggest that viruses contribute to the mortality of deep subsurface prokaryotes through cell lysis, and viruses may alter the genetic potential of their hosts through the processes of lysogenic conversion and horizontal gene transfer.

Subsurface transport program: Research summary

International Nuclear Information System (INIS)

1987-01-01

DOE's research program in subsurface transport is designed to provide a base of fundamental scientific information so that the geochemical, hydrological, and biological mechanisms that contribute to the transport and long term fate of energy related contaminants in subsurface ecosystems can be understood. Understanding the physical and chemical mechanisms that control the transport of single and co-contaminants is the underlying concern of the program. Particular attention is given to interdisciplinary research and to geosphere-biosphere interactions. The scientific results of the program will contribute to resolving Departmental questions related to the disposal of energy-producing and defense wastes. The background papers prepared in support of this document contain additional information on the relevance of the research in the long term to energy-producing technologies. Detailed scientific plans and other research documents are available for high priority research areas, for example, in subsurface transport of organic chemicals and mixtures and in the microbiology of deep aquifers. 5 figs., 1 tab

Cultivating the Deep Subsurface Microbiome

Science.gov (United States)

Casar, C. P.; Osburn, M. R.; Flynn, T. M.; Masterson, A.; Kruger, B.

2017-12-01

Subterranean ecosystems are poorly understood because many microbes detected in metagenomic surveys are only distantly related to characterized isolates. Cultivating microorganisms from the deep subsurface is challenging due to its inaccessibility and potential for contamination. The Deep Mine Microbial Observatory (DeMMO) in Lead, SD however, offers access to deep microbial life via pristine fracture fluids in bedrock to a depth of 1478 m. The metabolic landscape of DeMMO was previously characterized via thermodynamic modeling coupled with genomic data, illustrating the potential for microbial inhabitants of DeMMO to utilize mineral substrates as energy sources. Here, we employ field and lab based cultivation approaches with pure minerals to link phylogeny to metabolism at DeMMO. Fracture fluids were directed through reactors filled with Fe3O4, Fe2O3, FeS2, MnO2, and FeCO3 at two sites (610 m and 1478 m) for 2 months prior to harvesting for subsequent analyses. We examined mineralogical, geochemical, and microbiological composition of the reactors via DNA sequencing, microscopy, lipid biomarker characterization, and bulk C and N isotope ratios to determine the influence of mineralogy on biofilm community development. Pre-characterized mineral chips were imaged via SEM to assay microbial growth; preliminary results suggest MnO2, Fe3O4, and Fe2O3 were most conducive to colonization. Solid materials from reactors were used as inoculum for batch cultivation experiments. Media designed to mimic fracture fluid chemistry was supplemented with mineral substrates targeting metal reducers. DNA sequences and microscopy of iron oxide-rich biofilms and fracture fluids suggest iron oxidation is a major energy source at redox transition zones where anaerobic fluids meet more oxidizing conditions. We utilized these biofilms and fluids as inoculum in gradient cultivation experiments targeting microaerophilic iron oxidizers. Cultivation of microbes endemic to DeMMO, a system

Biosphere models for deep waste disposal

International Nuclear Information System (INIS)

Olyslaegers, G.

2005-01-01

The management of the radioactive waste requires the implementation of disposal systems that ensure an adequate degree of isolation of the radioactivity from man and the environment. Because there are still a lot of uncertainties and a lack of consensus with respect to the importance of the exposure pathways of man, a project BioMoSA (Biosphere Models for Safety Assessment) was elaborated in the Fifth Framework Programme of EURATOM). It aimed at improving the scientific basis for the application of biosphere models in the framework of long-term safety studies for radioactive waste disposal facilities. The section radiological evaluations of SCK-CEN took part in the BioMoSA project. n the BioMoSA project, the reference biosphere methodology developed in the IAEA programme BIOMASS (Biosphere Modelling and Assessment methods) is implemented). We used this methodology in order to increase the transparency of biosphere modelling; t evaluate the importance of the different radionuclides and pathways, and to enhance public confidence in the assessment of potential radiological dose to population groups far into the future. Five European locations, covering a wide range of environmental and agricultural conditions are described and characterised. Each participant developed a specific biosphere model for their site. In order to achieve a consistency in this model derivation, a staged approach has been followed. Successively the biosphere is described and conceptual, mathematical and numerical models are constructed. For each of the locations site-specific parameters are selected. In the project, we had the specific task to make a comparison between the model results generated by the different participants. Results from these studies are presented and discussed

Water extraction of coals - potential for estimating low molecular weight organic acids as carbon feedstock for the deep terrestrial biosphere

Energy Technology Data Exchange (ETDEWEB)

Vieth, A.; Mangelsdorf, K.; Sykes, R.; Horsfield, B. [Geoforschungszentrum Potsdam, Potsdam (Germany)

2008-08-15

With the recent increasing interest in the deep biosphere, the question arises as to where the carbon sources that support deep microbial communities are derived from. Our research was focussed on the water-soluble, low molecular weight (LMW) organic acids that are potentially available from different sedimentary lithologies to serve as a carbon source to feed the deep biosphere. A series of Eocene-Pleistocene coals, mudstones and sandstones of varying rank (maturity) and total organic carbon (TOC) content from the Waikato Basin, New Zealand, has been Soxhlet-extracted using water. The combined concentration of recovered formate, acetate and oxalate range from 366 to 2499 {mu} g/g sediment and appear to be dependent on rank, organofacies and TOC. The yields indicate the potential of carbonaceous sediments to feed the local deep terrestrial biosphere over geological periods of time. The existence of living microbial organisms in the mudstones and sandstones was proved by the identification of intact phospholipids (PLs).

Atribacteria from the Subseafloor Sedimentary Biosphere Disperse to the Hydrosphere through Submarine Mud Volcanoes.

Science.gov (United States)

Hoshino, Tatsuhiko; Toki, Tomohiro; Ijiri, Akira; Morono, Yuki; Machiyama, Hideaki; Ashi, Juichiro; Okamura, Kei; Inagaki, Fumio

2017-01-01

Submarine mud volcanoes (SMVs) are formed by muddy sediments and breccias extruded to the seafloor from a source in the deep subseafloor and are characterized by the discharge of methane and other hydrocarbon gasses and deep-sourced fluids into the overlying seawater. Although SMVs act as a natural pipeline connecting the Earth's surface and subsurface biospheres, the dispersal of deep-biosphere microorganisms and their ecological roles remain largely unknown. In this study, we investigated the microbial communities in sediment and overlying seawater at two SMVs located on the Ryukyu Trench off Tanegashima Island, southern Japan. The microbial communities in mud volcano sediments were generally distinct from those in the overlying seawaters and in the well-stratified Pacific margin sediments collected at the Peru Margin, the Juan de Fuca Ridge flank off Oregon, and offshore of Shimokita Peninsula, northeastern Japan. Nevertheless, in-depth analysis of different taxonomic groups at the sub-species level revealed that the taxon affiliated with Atribacteria , heterotrophic anaerobic bacteria that typically occur in organic-rich anoxic subseafloor sediments, were commonly found not only in SMV sediments but also in the overlying seawater. We designed a new oligonucleotide probe for detecting Atribacteria using the catalyzed reporter deposition-fluorescence in situ hybridization (CARD-FISH). CARD-FISH, digital PCR and sequencing analysis of 16S rRNA genes consistently showed that Atribacteria are abundant in the methane plumes of the two SMVs (0.58 and 1.5 × 10 4 cells/mL, respectively) but not in surrounding waters, suggesting that microbial cells in subseafloor sediments are dispersed as "deep-biosphere seeds" into the ocean. These findings may have important implications for the microbial transmigration between the deep subseafloor biosphere and the hydrosphere.

Visualizing Organic Textures and Biosignatures: Analysis of the Deep Biosphere, Meteorites, and Mars

Science.gov (United States)

Bhartia, R.

2017-12-01

Understanding life in the subsurface offers a unique understanding of how we can search for potential biosignatures on Mars. The spatial distri- bution of communities in this nutrient limited envi- ronment can be co-located with mineral facies, associ- ated to morphological features, or bound to zones of high potential energy. Comparing these organic textures to abotically driven processes in meteorites, when coupled to characterization of the organic con- tent, spatial relationships to mineralogical and ele- mental textures, and morphology will aid in our under- standing of the likely provenance of organics on Mars. Often we approach biosignatures detection with an earth-centric perspective where we assume that extant or ancient life leaves behind visible indicators; either as pigments used to absorb energy from the sun/radiation, protectant from UV radiation, or as veri- gated mineral facies that may persist in the rock rec- ord. Our analysis of subsurface life, a region that is decoupled from the photozone (decoupled from photo- synthesis) and/or exists in a nutrient limited environ- ment, has shown that we need to capitalize on a wider range of the electromagnetic spectrum over multiple spatial scales to understand where microbial life may exist, how they make a living, and how/if their signa- tures will persist geological time. Similar to the approach of the NAI Life Under- ground program, the Mars 2020 project includes a suite of instruments operating over the meter to micrometer scale that will observe the surface (and near subsur- face) of Mars from gamma rays to the IR - a range where minerals and organics reflect, absorb, and vi- brate. More specifically, the combined capabilities of both SHERLOC (a deep UV Raman/fluorescence spectrometer) and PIXL (an X-ray fluorescence spectrometer), spatial maps of organics minerals and elements will be correlated to morphology and textures to assess potential biosignatures. We present here our results of a spectral

Deep percolation in greenhouse-cultivated celery using the technique of subsurface film strips placement

Directory of Open Access Journals (Sweden)

Zhida Du

2014-05-01

Full Text Available To reduce the deep percolation during greenhouse vegetable cultivation, the technique of subsurface film strips placement was tested. Four treatments with two kinds of cross-sections (flat and U-shaped and two different spacings (10 cm and 40 cm of subsurface film strips were arranged in a greenhouse before planting celery. At the same time, a non-film treatment was arranged for comparison. Soil water content was measured and irrigation time was adjusted according to the soil water content. Evapotranspiration of celery during growth was calculated by the method of energy balance and the deep percolation was calculated by the equation of water balance. Deep percolation was reduced in all experimental treatments. Greater reduction in deep percolation was observed when using U-shaped cross-section strips compared with that using the flat cross-section strips. In addition, greater reduction in deep percolation was observed when the spacing between the film strips was smaller. The results of this test showed that the technique of subsurface film strips placement can reduce deep percolation and conserve irrigation water for greenhouse vegetables cultivation. However, the optimal layout variables for the use of the technique of subsurface film strips placement need further experimental and numerical analysis.

The enhancement of a biosphere code for use in the assessment of deep repositories for radioactive waste

International Nuclear Information System (INIS)

Ashton, J.; Little, R.H.

1991-01-01

A disposal system for radioactive waste is conventionally considered to consist of the engineered barriers of the repository, the geosphere and the surface environment or biosphere. Computer codes have been developed to assist in assessing the impact of radionuclides migrating from the repository through the disposal system. Codes have been developed to represent the repository, the geosphere and the biosphere. The fundamental role of the biosphere codes is, for radionuclide inputs, to estimate the dose, or probability distribution function of dose, to a maximally exposed individual as a function of time. In the United Kingdom, the primary target for long-term radiological impacts from a single disposal facility is that the risk of fatal cancer to an individual in any one year should not exceed one in a million at any time. The recent revival of interest in the UK in the deep disposal of radioactive waste has resulted in the need for the risk to be estimated over timescales up to a million years, since a deep geologic repository might be able to withstand the effects of several future glacial episodes. Biosphere modelling for deep disposal of radioactive waste poses particular problems since the surface environment is expected to evolve as a result of changes in climatic conditions. Consequently the effect of climate induced changes in geomorphology, land use and sea level on the calculated risk have to be considered. This paper outlines the development of a new version of the dynamic biosphere model DECOS, which was developed originally in the context of shallow site assessments. The new version of the code, called DECOS-MG, is capable of simulating the effect of multiple glacial cycles and changes in sea level. (14 refs., 3 figs., 2 tabs.)

Prospects for the study of evolution in the deep biosphere.

Science.gov (United States)

Biddle, Jennifer F; Sylvan, Jason B; Brazelton, William J; Tully, Benjamin J; Edwards, Katrina J; Moyer, Craig L; Heidelberg, John F; Nelson, William C

2011-01-01

Since the days of Darwin, scientists have used the framework of the theory of evolution to explore the interconnectedness of life on Earth and adaptation of organisms to the ever-changing environment. The advent of molecular biology has advanced and accelerated the study of evolution by allowing direct examination of the genetic material that ultimately determines the phenotypes upon which selection acts. The study of evolution has been furthered through examination of microbial evolution, with large population numbers, short generation times, and easily extractable DNA. Such work has spawned the study of microbial biogeography, with the realization that concepts developed in population genetics may be applicable to microbial genomes (Martiny et al., 2006; Manhes and Velicer, 2011). Microbial biogeography and adaptation has been examined in many different environments. Here we argue that the deep biosphere is a unique environment for the study of evolution and list specific factors that can be considered and where the studies may be performed. This publication is the result of the NSF-funded Center for Dark Energy Biosphere Investigations (C-DEBI) theme team on Evolution (www.darkenergybiosphere.org).

A Methodology to analyze the biosphere in the assessment of deep geological repositories for high level radioactive waste

International Nuclear Information System (INIS)

Pinedo, P.; Smith, G.

1996-11-01

This report summarizes the work done and the achievements reached within the R and D Project that IMA/CIEMAT has had with ENRESA during 1993-1995. The overall R and D Project has a wide radiological protection context, but the work reported here relates only to the development of a Methodology for considering the Biosphere sub-system in the assessments of deep geological repositories for high radioactive wastes (HLW). The main areas concerned within the Methodology have to do with the Biosphere structure and morphology in the long-term relevant to deep disposal of HLW: in the contexts of the assessment of these systems, and appropriate modelling of the behaviour of radionuclides released to the biosphere system and with the associated human exposure. This document first provides a review of the past and present international and national concerns about the biosphere modelling and its importance in relation to the definition of safety criteria. A joint ENRESA/ANDRA/IPSN/CIEMAT study about the definition and practical descriptions of the biosphere systems under different climatic states is then summarized. The Methodology developed by IMA/CIEMAT is outlined with an illustration of the way it works. Different steps and procedures are included for a better practical understanding of the software tools developed within the project to support the application of the Methodology. This methodology is widely based on an international working group on ''Reference Biospheres'', part of the BIOMOVS II Project. Specific software developments have been carried out in collaboration with Qunti Sci Itd and with the Polytechnical University of Madrid. (Author)

Hydraulic fracturing offers view of microbial life in the deep terrestrial subsurface.

Science.gov (United States)

Mouser, Paula J; Borton, Mikayla; Darrah, Thomas H; Hartsock, Angela; Wrighton, Kelly C

2016-11-01

Horizontal drilling and hydraulic fracturing are increasingly used for recovering energy resources in black shales across the globe. Although newly drilled wells are providing access to rocks and fluids from kilometer depths to study the deep biosphere, we have much to learn about microbial ecology of shales before and after 'fracking'. Recent studies provide a framework for considering how engineering activities alter this rock-hosted ecosystem. We first provide data on the geochemical environment and microbial habitability in pristine shales. Next, we summarize data showing the same pattern across fractured shales: diverse assemblages of microbes are introduced into the subsurface, eventually converging to a low diversity, halotolerant, bacterial and archaeal community. Data we synthesized show that the shale microbial community predictably shifts in response to temporal changes in geochemistry, favoring conservation of key microorganisms regardless of inputs, shale location or operators. We identified factors that constrain diversity in the shale and inhibit biodegradation at the surface, including salinity, biocides, substrates and redox. Continued research in this engineered ecosystem is required to assess additive biodegradability, quantify infrastructure biocorrosion, treat wastewaters that return to the surface and potentially enhance energy production through in situ methanogenesis. © FEMS 2016. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Characterization and genome analysis of the first facultatively alkaliphilic Thermodesulfovibrio isolated from the deep terrestrial subsurface

Directory of Open Access Journals (Sweden)

Yulia Frank

2016-12-01

1. Overall, our results provide genomic insights into metabolism of the Thermodesulfovibrio lineage in microbial communities of the deep subsurface biosphere

Ship space to database: emerging infrastructures for studies of the deep subseafloor biosphere

Directory of Open Access Journals (Sweden)

Peter T. Darch

2016-11-01

Full Text Available Background An increasing array of scientific fields face a “data deluge.” However, in many fields data are scarce, with implications for their epistemic status and ability to command funding. Consequently, they often attempt to develop infrastructure for data production, management, curation, and circulation. A component of a knowledge infrastructure may serve one or more scientific domains. Further, a single domain may rely upon multiple infrastructures simultaneously. Studying how domains negotiate building and accessing scarce infrastructural resources that they share with other domains will shed light on how knowledge infrastructures shape science. Methods We conducted an eighteen-month, qualitative study of scientists studying the deep subseafloor biosphere, focusing on the Center for Dark Energy Biosphere Investigations (C-DEBI and the Integrated Ocean Drilling Program (IODP and its successor, the International Ocean Discovery Program (IODP2. Our methods comprised ethnographic observation, including eight months embedded in a laboratory, interviews (n = 49, and document analysis. Results Deep subseafloor biosphere research is an emergent domain. We identified two reasons for the domain’s concern with data scarcity: limited ability to pursue their research objectives, and the epistemic status of their research. Domain researchers adopted complementary strategies to acquire more data. One was to establish C-DEBI as an infrastructure solely for their domain. The second was to use C-DEBI as a means to gain greater access to, and reconfigure, IODP/IODP2 to their advantage. IODP/IODP2 functions as infrastructure for multiple scientific domains, which creates competition for resources. C-DEBI is building its own data management infrastructure, both to acquire more data from IODP and to make better use of data, once acquired. Discussion Two themes emerge. One is data scarcity, which can be understood only in relation to a domain�

Methodology for the biosphere analysis in the evaluation of deep geological repositories for high radioactive waste

International Nuclear Information System (INIS)

Cancio, D.; Pinedo, P.; Aguero, A.; Simon, I.; Torres, C.; Robles, B.; Smith, G.M.; Little, R.; Watkings, B.; Brice, A.; Jaen, J.A.; Coronado, S.

1997-01-01

This report summarizes the work done and the achievements reached within the R and D Project that IMA/CIEMAT has had with ENRESA during 1993-1995. The overal R and D Project has a wide radiological protection context, but the work reported here relates only to the development of a Methodology for considering the Biosphere sub-system in the assessments of deep geological repositories for high radioactive wastes (HLW). The main areas concerned within the Methodology have to do with Biosphere structure and morphology in the long-term relevant to deep disposal of HLW: in the contexts of the assessment of these systems, and appropiate modelling of the behaviour of radionuclides released to the biosphere system and with the associated human exposure. This document first provides a review of the past and present international and national concerns about the biosphere modelling and its importance in relation to the definition of safety criteria. A joint ENRESA/ANDRA/IPSN/CIEMAT study about the definition and proactical descriptions of the biosphere systems under different climatic states is then summarized. The Methodology developed by IMA/CIEMAT is outlined with an illustration of the way it works. Different steps and procedures are included for a better proactical understanding of the software tools developed within the project to support the application of the Methologoy. This Methodology is widely based on an international working group on Reference Biospheres part national work for ENRESA has been supported under a collaborative agreement with QuantiSci Ltd. Specific software development have been carried out in collaboration with QuantiSci Ltd and with the Polytechnical University of Madrid. Most of the items included within the Methodology and moreover the Methodology as a whole, follows a continuos progressive development. It is increasinaly recognized that assessment capabilities, establisment of safety criteria and regulatory framework and the steps in a

Survivability and growth kinetics of methanogenic archaea at various pHs and pressures: Implications for deep subsurface life on Mars

Science.gov (United States)

Sinha, Navita; Nepal, Sudip; Kral, Timothy; Kumar, Pradeep

2017-02-01

Life as we know it requires liquid water and sufficient liquid water is highly unlikely on the surface of present-day Mars. However, according to thermal models there is a possibility of liquid water in the deep subsurface of Mars. Thus, the martian subsurface, where the pressure and temperature is higher, could potentially provide a hospitable environment for a biosphere. Also, methane has been detected in the Mars' atmosphere. Analogous to Earth's atmospheric methane, martian methane could also be biological in origin. The carbon and energy sources for methanogenesis in the subsurface of Mars could be available by downwelling of atmospheric CO2 into the regolith and water-rock reactions such as serpentinization, respectively. Corresponding analogs of the martian subsurface on Earth might be the active sites of serpentinization at depths where methanogenic thermophilic archaea are the dominant species. Methanogens residing in Earth's hydrothermal environments are usually exposed to a variety of physiological stresses including a wide range of pressures, temperatures, and pHs. Martian geochemical models imply that the pH of probable groundwater varies from 4.96 to 9.13. In this work, we used the thermophilic methanogen, Methanothermobacter wolfeii, which grows optimally at 55oC. Therefore, a temperature of 55oC was chosen for these experiments, possibly simulating Mars' subsurface temperature. A martian geophysical model suggests depth and pressure corresponding to a temperature of 55 °C would be between 1-30 km and 100-3,000 atm respectively. Here, we have simulated Mars deep subsurface pH, pressure, and temperature conditions and have investigated the survivability, growth rate, and morphology of M. wolfeii after exposure to a wide range of pH 5-9) and pressure (1-1200 atm) at a temperature of 55 °C. Interestingly, in this study we have found that M. wolfeii was able to survive at all the pressures and pHs tested at 55 °C. In order to understand the effect of

Prospects for the study of evolution in the deep biosphere

Directory of Open Access Journals (Sweden)

Jennifer F Biddle

2012-01-01

Full Text Available Since the days of Darwin, scientists have used the framework of the theory of evolution to explore the interconnectedness of life on Earth and adaptation of organisms to the ever-changing environment. The advent of molecular biology has advanced and accelerated the study of evolution by allowing direct examination of the genetic material that ultimately determines the phenotypes upon which selection acts. The study of evolution has been furthered through examination of microbial evolution, with large population numbers, short generation times and easily extractable DNA. Such work has spawned the study of microbial biogeography, with the realization that concepts developed in population genetics may be applicable to microbial genomes (Manhes et al. 2011, Martiny et al. 2006. Microbial biogeography and adaptation has been examined in many different environments. Here we argue that the deep biosphere is a unique environment for the study of evolution and list specific factors that can be considered and where the studies may be performed. This publication is the result of the NSF-funded Center for Dark Energy Biosphere Investigations (C-DEBI theme team on Evolution (www.darkenergybiosphere.org.

Prospects for the Study of Evolution in the Deep Biosphere

Science.gov (United States)

Biddle, Jennifer F.; Sylvan, Jason B.; Brazelton, William J.; Tully, Benjamin J.; Edwards, Katrina J.; Moyer, Craig L.; Heidelberg, John F.; Nelson, William C.

2012-01-01

Since the days of Darwin, scientists have used the framework of the theory of evolution to explore the interconnectedness of life on Earth and adaptation of organisms to the ever-changing environment. The advent of molecular biology has advanced and accelerated the study of evolution by allowing direct examination of the genetic material that ultimately determines the phenotypes upon which selection acts. The study of evolution has been furthered through examination of microbial evolution, with large population numbers, short generation times, and easily extractable DNA. Such work has spawned the study of microbial biogeography, with the realization that concepts developed in population genetics may be applicable to microbial genomes (Martiny et al., 2006; Manhes and Velicer, 2011). Microbial biogeography and adaptation has been examined in many different environments. Here we argue that the deep biosphere is a unique environment for the study of evolution and list specific factors that can be considered and where the studies may be performed. This publication is the result of the NSF-funded Center for Dark Energy Biosphere Investigations (C-DEBI) theme team on Evolution (www.darkenergybiosphere.org). PMID:22319515

Drastic environmental change and its effects on a planetary biosphere

Science.gov (United States)

Schulze-Makuch, Dirk; Irwin, Louis N.; Fairén, Alberto G.

2013-07-01

Environmental conditions can change drastically and rapidly during the natural history of a planetary body. These changes affect the biosphere and can spur evolution via the mechanism of directional selection leading to the innovation of new processes and forms of life, or alternatively leading to the extinction of certain life forms. Based on the natural history of Earth, the effect on a planet's biosphere depends on three factors: (1) the nature and time scale of change, (2) the composition of the biosphere prior to change, and (3) the nature of the environment following the change. Though Earth has undergone various periods of drastic environmental change, life has shown an enormous resiliency and became more diverse and complex as a consequence of these events. Mars and Venus have undergone even larger environmental changes, both from habitable conditions under which the origin of life (or transfer of life from Earth) seem plausible, to a dry and cold planet punctuated by wetter conditions, and a hyperthermic greenhouse, respectively. Given its planetary history, life on Mars could have retreated to a psychrophilic lifestyle in the deep subsurface or to environmental near-surface niches, such as hydrothermal regions and caves. Further, strong directional selection could have pushed putative martian life to evolve alternating cycles between active and dormant forms, as well as the innovation of new traits adapted to challenging near-surface conditions. Life in the subsurface or on the surface of Venus seems impossible today, but microorganisms may have adapted to thrive in the lower cloud layer, possibly using a biochemical strategy analogous to Photosystem I and chemoautotrophic sulfur metabolism, and employing cycloocta sulfur for UV protection.

Metagenome sequencing and 98 microbial genomes from Juan de Fuca Ridge flank subsurface fluids

Science.gov (United States)

Jungbluth, Sean P.; Amend, Jan P.; Rappé, Michael S.

2017-03-01

The global deep subsurface biosphere is one of the largest reservoirs for microbial life on our planet. This study takes advantage of new sampling technologies and couples them with improvements to DNA sequencing and associated informatics tools to reconstruct the genomes of uncultivated Bacteria and Archaea from fluids collected deep within the Juan de Fuca Ridge subseafloor. Here, we generated two metagenomes from borehole observatories located 311 meters apart and, using binning tools, retrieved 98 genomes from metagenomes (GFMs). Of the GFMs, 31 were estimated to be >90% complete, while an additional 17 were >70% complete. Phylogenomic analysis revealed 53 bacterial and 45 archaeal GFMs, of which nearly all were distantly related to known cultivated isolates. In the GFMs, abundant Bacteria included Chloroflexi, Nitrospirae, Acetothermia (OP1), EM3, Aminicenantes (OP8), Gammaproteobacteria, and Deltaproteobacteria, while abundant Archaea included Archaeoglobi, Bathyarchaeota (MCG), and Marine Benthic Group E (MBG-E). These data are the first GFMs reconstructed from the deep basaltic subseafloor biosphere, and provide a dataset available for further interrogation.

Induced and catalysed mineral precipitation in the deep biosphere

Science.gov (United States)

Meister, Patrick

2017-04-01

Authigenic and early diagenetic minerals provide archives of past (bio)geochemical processes. In particular, isotopic signatures preserved in the diagenetic phases have been shown to document drastic changes of subsurface microbial activity (the deep biosphere) over geological time periods (Contreras et al., 2013; Meister, 2015). Geochemical and isotopic signatures in authigenic minerals may also document surface conditions and past climate. Nevertheless, such use of authigenic mineral phases as (bio)geochemical archives is often hampered by the insufficient understanding of mineral precipitation mechanisms. Accordingly the time, place and rate of mineral precipitation are often not well constrained. Also, element partitioning and isotopic fractionation may be modified as a result of the precipitation mechanism. Early diagenetic dolomite and quartz from drilled sequences in the Pacific were compared with adjacent porewater compositions and isotope signatures to gain fundamental insight into the factors controlling mineral precipitation. The formation of dolomite in carbonate-free organic carbon-rich ocean margin sediments (e.g. Peru Margin; Ocean Drilling Program, ODP, Site 1229; Meister et al., 2007) relies on the alkalinity-increase driven by anaerobic oxidation of methane and, perhaps, by alteration of clay minerals. In contrast, quartz is often significantly oversaturated in marine porewaters as the dissolved silica concentration is buffered by more soluble opal-A. For example, quartz does not form throughout a 400 metre thick sedimentary sequence in the Eastern Equatorial Pacific (ODP Site 1226; Meister et al., 2014) because it is kinetically inhibited. This behaviour can be explained by Ostwald's step rule, which suggests that the metastable phase forms faster. However, hard-lithified quartz readily forms where silica concentration drops sharply below opal-saturation. This violation of Ostwald's step rule must be driven by an auxiliary process, such as the

Viral abundance and activity in the deep sub-seafloor biosphere

DEFF Research Database (Denmark)

Middelboe, Mathias; Glud, Ronnie N.; Filippini, Manuela

2011-01-01

of undiluted, but homogenized, sediment samples (13.3 and 79.8 mbsf) in anaerobic bags. Viral abundance decreased rapidly (decay rates of 0.010 +/- 0.002 [SD] and 0.022 +/- 0.018 [SD] h(-1), respectively) in the incubations, suggesting that homogenization exposed the viruses to degradation processes. We...... hypothesize that most of the deep subsurface viral communities inhabit a microenvironment where the viruses are protected against decay, and can therefore persist in undisturbed sediments for hundreds of thousands, perhaps even millions, of years....

Alternative biosphere modeling for safety assessment of HLW disposal taking account of geosphere-biosphere interface of marine environment

International Nuclear Information System (INIS)

Kato, Tomoko; Ishiguro, Katsuhiko; Naito, Morimasa; Ikeda, Takao; Little, Richard

2001-03-01

In the safety assessment of a high-level radioactive waste (HLW) disposal system, it is required to estimate radiological impacts on future human beings arising from potential radionuclide releases from a deep repository into the surface environment. In order to estimated the impacts, a biosphere model is developed by reasonably assuming radionuclide migration processes in the surface environment and relevant human lifestyles. It is important to modify the present biosphere models or to develop alternative biosphere models applying the biosphere models according to quality and quantify of the information acquired through the siting process for constructing the repository. In this study, alternative biosphere models were developed taking geosphere-biosphere interface of marine environment into account. Moreover, the flux to dose conversion factors calculated by these alternative biosphere models was compared with those by the present basic biosphere models. (author)

Deep and Ultra-deep Underground Observatory for In Situ Stress, Fluids, and Life

Science.gov (United States)

Boutt, D. F.; Wang, H.; Kieft, T. L.

2008-12-01

The question 'How deeply does life extend into the Earth?' forms a single, compelling vision for multidisciplinary science opportunities associated with physical and biological processes occurring naturally or in response to construction in the deep and ultra-deep subsurface environment of the Deep Underground Science and Engineering Laboratory (DUSEL) in the former Homestake mine. The scientific opportunity is to understand the interaction between the physical environment and microbial life, specifically, the coupling among (1) stress state and deformation; (2) flow and transport and origin of fluids; and (3) energy and nutrient sources for microbial life; and (4) microbial identity, diversity and activities. DUSEL-Homestake offers the environment in which these questions can be addressed unencumbered by competing human activities. Associated with the interaction among these variables are a number of questions that will be addressed at variety of depths and scales in the facility: What factors control the distribution of life as a function of depth and temperature? What patterns in microbial diversity, microbial activity and nutrients are found along this gradient? How do state variables (stress, strain, temperature, and pore pressure) and constitutive properties (permeability, porosity, modulus, etc.) vary with scale (space, depth, time) in a large 4D heterogeneous system: core - borehole - drift - whole mine - regional? How are fluid flow and stress coupled in a low-permeability, crystalline environment dominated by preferential flow paths? How does this interaction influence the distribution of fluids, solutes, gases, colloids, and biological resources (e.g. energy and nutritive substrates) in the deep continental subsurface? What is the interaction between geomechanics/geohydrology and microbiology (microbial abundance, diversity, distribution, and activities)? Can relationships elucidated within the mechanically and hydrologically altered subsurface habitat

Acetogenesis in the energy-starved deep biosphere – a paradox?

Directory of Open Access Journals (Sweden)

Mark Alexander Lever

2012-01-01

Full Text Available Under anoxic conditions in sediments, acetogens are often thought to be outcompeted by microorganisms performing energetically more favorable metabolic pathways, such as sulfate reduction or methanogenesis. Recent evidence from deep subseafloor sediments suggesting acetogenesis in the presence of sulfate reduction and methanogenesis has called this notion into question, however. Here I argue that acetogens can successfully coexist with sulfate reducers and methanogens for multiple reasons. These include (1 substantial energy yields from most acetogenesis reactions across the wide range of conditions encountered in the subseafloor, (2 wide substrate spectra that enable niche differentiation by use of different substrates and/or pooling of energy from a broad range of energy substrates, (3 reduced energetic cost of biosynthesis among acetogens due to use of the reductive acetyl CoA pathway for both energy production and biosynthesis coupled with the ability to use many organic precursors to produce the key intermediate acetyl CoA. This leads to the general conclusion that, beside Gibbs free energy yields, variables such as metabolic strategy and energetic cost of biosynthesis need to be taken into account to understand microbial survival in the energy-depleted deep biosphere.

Development of anomaly detection models for deep subsurface monitoring

Science.gov (United States)

Sun, A. Y.

2017-12-01

Deep subsurface repositories are used for waste disposal and carbon sequestration. Monitoring deep subsurface repositories for potential anomalies is challenging, not only because the number of sensor networks and the quality of data are often limited, but also because of the lack of labeled data needed to train and validate machine learning (ML) algorithms. Although physical simulation models may be applied to predict anomalies (or the system's nominal state for that sake), the accuracy of such predictions may be limited by inherent conceptual and parameter uncertainties. The main objective of this study was to demonstrate the potential of data-driven models for leakage detection in carbon sequestration repositories. Monitoring data collected during an artificial CO2 release test at a carbon sequestration repository were used, which include both scalar time series (pressure) and vector time series (distributed temperature sensing). For each type of data, separate online anomaly detection algorithms were developed using the baseline experiment data (no leak) and then tested on the leak experiment data. Performance of a number of different online algorithms was compared. Results show the importance of including contextual information in the dataset to mitigate the impact of reservoir noise and reduce false positive rate. The developed algorithms were integrated into a generic Web-based platform for real-time anomaly detection.

On using rational enzyme redesign to improve enzyme-mediated microbial dehalogenation of recalcitrant substances in deep-subsurface environments

International Nuclear Information System (INIS)

Ornstein, R.L.

1993-06-01

Heavily halogenated hydrocarbons are one of the most prevalent classes of man-made recalcitrant environmental contaminants and often make their way into subsurface environments. Biodegradation of heavily chlorinated compounds in the deep subsurface often occurs at extremely slow rates because native enzymes of indigenous microbes are unable to efficiently metabolize such synthetic substances. Cost-effective engineering solutions do not exist for dealing with disperse and recalcitrant pollutants in the deep subsurface (i.e., ground water, soils, and sediments). Timely biodegradation of heavily chlorinated compounds in the deep subsurface may be best accomplished by rational redesign of appropriate enzymes that enhance the ability of indigenous microbes to metabolize these substances. The isozyme family cytochromes P450 are catalytically very robust and are found in all aerobic life forms and may be active in may anaerobes as well. The author is attempting to demonstrate proof-of-principle rational enzyme redesign of cytochromes P450 to enhance biodehalogenation

Living microbial ecosystems within the active zone of catagenesis: Implications for feeding the deep biosphere

Science.gov (United States)

Horsfield, B.; Schenk, H. J.; Zink, K.; Ondrak, R.; Dieckmann, V.; Kallmeyer, J.; Mangelsdorf, K.; di Primio, R.; Wilkes, H.; Parkes, R. J.; Fry, J.; Cragg, B.

2006-06-01

Earth's largest reactive carbon pool, marine sedimentary organic matter, becomes increasingly recalcitrant during burial, making it almost inaccessible as a substrate for microorganisms, and thereby limiting metabolic activity in the deep biosphere. Because elevated temperature acting over geological time leads to the massive thermal breakdown of the organic matter into volatiles, including petroleum, the question arises whether microorganisms can directly utilize these maturation products as a substrate. While migrated thermogenic fluids are known to sustain microbial consortia in shallow sediments, an in situ coupling of abiotic generation and microbial utilization has not been demonstrated. Here we show, using a combination of basin modelling, kinetic modelling, geomicrobiology and biogeochemistry, that microorganisms inhabit the active generation zone in the Nankai Trough, offshore Japan. Three sites from ODP Leg 190 have been evaluated, namely 1173, 1174 and 1177, drilled in nearly undeformed Quaternary and Tertiary sedimentary sequences seaward of the Nankai Trough itself. Paleotemperatures were reconstructed based on subsidence profiles, compaction modelling, present-day heat flow, downhole temperature measurements and organic maturity parameters. Today's heat flow distribution can be considered mainly conductive, and is extremely high in places, reaching 180 mW/m 2. The kinetic parameters describing total hydrocarbon generation, determined by laboratory pyrolysis experiments, were utilized by the model in order to predict the timing of generation in time and space. The model predicts that the onset of present day generation lies between 300 and 500 m below sea floor (5100-5300 m below mean sea level), depending on well location. In the case of Site 1174, 5-10% conversion has taken place by a present day temperature of ca. 85 °C. Predictions were largely validated by on-site hydrocarbon gas measurements. Viable organisms in the same depth range have been

Fossilized intact polar lipids of photosynthetic organisms in ancient subsurface sediments

Science.gov (United States)

Bauersachs, T.; Schouten, S.; Hopmans, E. C.; Sinninghe Damsté, J. S.

2009-12-01

In recent years, the idea of a rich microbial biosphere in the marine sea floor has been widely accepted. This so-called “deep biosphere” is estimated to contain ca. 50 % of Earth’s total prokaryotic biomass with the overall order of magnitude of microbial cells in the sea floor being the same as the biomass of all surface plant life (Whitman et al. 1998). Evidence for the existence of a deep biosphere comes, among others, from the analysis of intact polar lipids (IPLs). This approach presumes that IPLs almost instantaneously lose their polar head group after cell death and thus do not preserve on geological timescales. Consequently, IPLs in the subsurface should derive from in situ production and hence indicate the presence of living prokaryotic cells. For example, in various oceanic subsurface sediments archaeal IPLs have been found, suggesting that Archaea constitute a major fraction of the deep biosphere biomass (Lipp et al. 2008). In this study, we found IPLs of heterocystous cyanobacteria in a number of ancient and deeply buried sediments. Heterocystous cyanobacteria are strictly photoautotrophic organisms that are a common constituent of the phytoplankton community in many freshwater and brackish environments but are also encountered in the marine realm as endosymbionts of diatom species. Under nitrogen-depleted conditions, these organisms carry out nitrogen fixation in specialized cells, known as heterocysts. These cells contain a suite of heterocyst glycolipids (HGs) that have not been identified in any other organism and are thus unique biological markers for nitrogen-fixing heterocystous cyanobacteria. Using high performance liquid chromatography coupled to electrospray ionisation tandem mass spectrometry (HPLC/ESI-MS/MS), we detected HGs in Pleistocene and Pliocene Mediterranean sapropels buried up to 60 m below the seafloor. In addition, these HGs were also found in lacustrine deposits of the Oligocene Lake Enspel (35 Ma), the Eocene Lake Messel

Temperature and pressure adaptation of a sulfate reducer from the deep subsurface

Directory of Open Access Journals (Sweden)

Katja eFichtel

2015-10-01

Full Text Available Microbial life in deep marine subsurface faces increasing temperatures and hydrostatic pressure with depth. In this study, we have examined growth characteristics and temperature-related adaptation of the Desulfovibrio indonesiensis strain P23 to the in situ pressure of 30 MPa. The strain originates from the deep subsurface of the eastern flank of the Juan de Fuca Ridge (IODP Site U1301. The organism was isolated at 20 °C and atmospheric pressure from ~61 °C-warm sediments approximately five meters above the sediment-basement interface. In comparison to standard laboratory conditions (20 °C and 0.1 MPa, faster growth was recorded when incubated at in situ pressure and high temperature (45 °C, while cell filamentation was induced by further compression. The maximum growth temperature shifted from 48°C at atmospheric pressure to 50°C under high-pressure conditions. Complementary cellular lipid analyses revealed a two-step response of membrane viscosity to increasing temperature with an exchange of unsaturated by saturated fatty acids and subsequent change from branched to unbranched alkyl moieties. While temperature had a stronger effect on the degree of fatty acid saturation and restructuring of main phospholipids, pressure mainly affected branching and length of side chains. The simultaneous decrease of temperature and pressure to ambient laboratory conditions allowed the cultivation of our moderately thermophilic strain. This may in turn be one key to a successful isolation of microorganisms from the deep subsurface adapted to high temperature and pressure.

Observation to Theory in Deep Subsurface Microbiology Research: Can We Piece It Together?

Science.gov (United States)

Colwell, F. S.; Thurber, A. R.

2016-12-01

Three decades of observations of microbes in deep environments have led to startling discoveries of life in the subsurface. Now, a few theoretical frameworks exist that help to define Stygian life. Temperature, redox gradients, productivity (e.g., in the overlying ocean), and microbial power requirements are thought to determine the distribution of microbes in the subsurface. Still, we struggle to comprehend the spatial and temporal spectra of Earth processes that define how deep microbe communities survive. Stommel diagrams, originally used to guide oceanographic sampling, may be useful in depicting the subsurface where microbial communities are impacted by co-occurring spatial and temporal phenomena that range across exponential scales. Spatially, the geological settings that influence the activity and distribution of microbes range from individual molecules or minerals all the way up to the planetary-scale where geological formations, occupying up to 105 km3, dictate the bio- and functional geography of microbial communities. Temporally, life in the subsurface may respond in time units familiar to humans (e.g., seconds to days) or to events that unfold over hundred millennial time periods. While surface community dynamics are underpinned by solar and lunar cycles, these cycles only fractionally dictate survival underground where phenomena like tectonic activity, isostatic rebound, and radioactive decay are plausible drivers of microbial life. Geological or planetary processes that occur on thousand or million year cycles could be uniquely important to microbial viability in the subsurface. Such an approach aims at a holistic comprehension of the interaction of Earth system dynamics with microbial ecology.

Characterization of DNA-repair potential in deep subsurface bacteria challenged by UV light, hydrogen peroxide, and gamma radiation

OpenAIRE

Arrage, Andrew Anthony

1991-01-01

Subsurface bacterial isolates obtained through the DOE Subsurface Science Program were tested for resistance to UV light, gamma radiation and H202. Some deep subsurface bacteria were resistant to UV light, demonstrating â ¥1.0% survival at fluences which resulted in a 0.0001% survival level of E. coli B. The percentage of UV resistant aerobic subsurface bacteria and surface soil bacteria were similar; 30.8% and 25.8% respectively. All of the microaerophilic subsurface isolates ...

Microbial metabolisms in a 2.5-km-deep ecosystem created by hydraulic fracturing in shales

Energy Technology Data Exchange (ETDEWEB)

Daly, Rebecca A.; Borton, Mikayla A.; Wilkins, Michael J.; Hoyt, David W.; Kountz, Duncan J.; Wolfe, Richard A.; Welch, Susan A.; Marcus, Daniel N.; Trexler, Ryan V.; MacRae, Jean D.; Krzycki, Joseph A.; Cole, David R.; Mouser, Paula J.; Wrighton, Kelly C.

2016-09-05

Hydraulic fracturing is the industry standard for extracting hydrocarbons from shale formations. Attention has been paid to the economic benefits and environmental impacts of this process, yet the biogeochemical changes induced in the deep subsurface are poorly understood. Recent single-gene investigations revealed that halotolerant microbial communities were enriched after hydraulic fracturing. Here the reconstruction of 31 unique genomes coupled to metabolite data from the Marcellus and Utica shales revealed that methylamine cycling supports methanogenesis in the deep biosphere. Fermentation of injected chemical additives also sustains long-term microbial persistence, while sulfide generation from thiosulfate represents a poorly recognized corrosion mechanism in shales. Extensive links between viruses and microbial hosts demonstrate active viral predation, which may contribute to the release of labile cellular constituents into the extracellular environment. Our analyses show that hydraulic fracturing provides the organismal and chemical inputs for colonization and persistence in the deep terrestrial subsurface.

A new macrofaunal limit in the deep biosphere revealed by extreme burrow depths in ancient sediments.

Science.gov (United States)

Cobain, S L; Hodgson, D M; Peakall, J; Wignall, P B; Cobain, M R D

2018-01-10

Macrofauna is known to inhabit the top few 10s cm of marine sediments, with rare burrows up to two metres below the seabed. Here, we provide evidence from deep-water Permian strata for a previously unrecognised habitat up to at least 8 metres below the sediment-water interface. Infaunal organisms exploited networks of forcibly injected sand below the seabed, forming living traces and reworking sediment. This is the first record that shows sediment injections are responsible for hosting macrofaunal life metres below the contemporaneous seabed. In addition, given the widespread occurrence of thick sandy successions that accumulate in deep-water settings, macrofauna living in the deep biosphere are likely much more prevalent than considered previously. These findings should influence future sampling strategies to better constrain the depth range of infaunal animals living in modern deep-sea sands. One Sentence Summary: The living depth of infaunal macrofauna is shown to reach at least 8 metres in new habitats associated with sand injections.

Single cell genomics indicates horizontal gene transfer and viral infections in a deep subsurface Firmicutes population

Directory of Open Access Journals (Sweden)

Jessica eLabonté

2015-04-01

Full Text Available A major fraction of Earth's prokaryotic biomass dwells in the deep subsurface, where cellular abundances per volume of sample are lower, metabolism is slower, and generation times are longer than those in surface terrestrial and marine environments. How these conditions impact biotic interactions and evolutionary processes is largely unknown. Here we employed single cell genomics to analyze cell-to-cell genome content variability and signatures of horizontal gene transfer (HGT and viral infections in five cells of Candidatus Desulforudis audaxviator, which were collected from a three km-deep fracture water in the 2.9 Ga-old Witwatersrand Basin of South Africa. Between 0 and 32 % of genes recovered from single cells were not present in the original, metagenomic assembly of Desulforudis, which was obtained from a neighboring subsurface fracture. We found a transposable prophage, a retron, multiple clustered regularly interspaced short palindromic repeats (CRISPRs and restriction-modification systems, and an unusually high frequency of transposases in the analyzed single cell genomes. This indicates that recombination, HGT and viral infections are prevalent evolutionary events in the studied population of microorganisms inhabiting a highly stable deep subsurface environment.

Basaltic substrate composition affects microbial community development and acts as a source of nutrients in the deep biosphere

Science.gov (United States)

Bailey, B.; Sudek, L.; Templeton, A.; Staudigel, H.; Tebo, B.; Moyer, C.; Davis, R.

2006-12-01

Studies of the oceanic crust over the past decade have revealed that in spite of the oligotrophic nature of this environment, a diverse biosphere is present in the upper 1 km of basaltic crust. The key energy source in this setting may be the high content of transistion metals (Fe, Mn) found in the basaltic glass, but in order to discover the role of Fe and Mn in the deep biosphere, we must first determine which microbes are present and how they attain the necessary metabolites for proliferation. Our work contributes to both questions through the use of molecular microbiology techniques and the exposure of specifically designed substrates on the ocean floor. Loihi Seamount off the southeast coast of the Big Island of Hawai'i provides a unique laboratory for the study of distribution and population of microbial communities associated with iron rich environments on the ocean floor. Iron oxide flocculent material (floc) dominates the direct and diffuse hydrothermal venting areas on Loihi which makes it a prime target for understanding the role of iron in biological systems in the deep biosphere. We collected iron oxide floc and basaltic glass from pillow basalts around several hydrothermal vents on the crater rim, within the pit crater Pele's Pit, and from deep off of the southern rift zone of Loihi using the HURL PISCES IV/V submersibles. We also deployed basaltic glass sand amended with various nutrients (phosphate, oxidized and reduced iron, manganese) and recovered them in subsequent years to determine how substrate composition affects community structure. We extracted DNA from both rock and iron flocs and used t-RFLP to obtain a genetic fingerprint of the microbial communities associated with each substrate. From olivine and tholeiitic basalt enrichments, it appears that substrate composition strongly influences microbial colonization and subsequent community development even when deployed in the same conditions. Culturing efforts have yielded several iron

Stable and Variable Parts of Microbial Community in Siberian Deep Subsurface Thermal Aquifer System Revealed in a Long-Term Monitoring Study

OpenAIRE

Frank, Yulia A.; Kadnikov, Vitaly V.; Gavrilov, Sergey N.; Banks, David; Gerasimchuk, Anna L.; Podosokorskaya, Olga A.; Merkel, Alexander Y.; Chernyh, Nikolai A.; Mardanov, Andrey V.; Ravin, Nikolai V.; Karnachuk, Olga V.; Bonch-Osmolovskaya, Elizaveta A.

2016-01-01

The goal of this work was to study the diversity of microorganisms inhabiting a deep subsurface aquifer system in order to understand their functional roles and interspecies relations formed in the course of buried organic matter degradation. A microbial community of a deep subsurface thermal aquifer in the Tomsk Region, Western Siberia was monitored over the course of five years via a 2.7 km deep borehole 3P, drilled down to a Palaeozoic basement. The borehole water discharges with a tempera...

Deep subsurface structure modeling and site amplification factor estimation in Niigata plain for broadband strong motion prediction

International Nuclear Information System (INIS)

Sato, Hiroaki

2009-01-01

This report addresses a methodology of deep subsurface structure modeling in Niigata plain, Japan to estimate site amplification factor in the broadband frequency range for broadband strong motion prediction. In order to investigate deep S-wave velocity structures, we conduct microtremor array measurements at nine sites in Niigata plain, which are important to estimate both long- and short-period ground motion. The estimated depths of the top of the basement layer agree well with those of the Green tuff formation as well as the Bouguer anomaly distribution. Dispersion characteristics derived from the observed long-period ground motion records are well explained by the theoretical dispersion curves of Love wave group velocities calculated from the estimated subsurface structures. These results demonstrate the deep subsurface structures from microtremor array measurements make it possible to estimate long-period ground motions in Niigata plain. Moreover an applicability of microtremor array exploration for inclined basement structure like a folding structure is shown from the two dimensional finite difference numerical simulations. The short-period site amplification factors in Niigata plain are empirically estimated by the spectral inversion analysis from S-wave parts of strong motion data. The resultant characteristics of site amplification are relative large in the frequency range of about 1.5-5 Hz, and decay significantly with the frequency increasing over about 5 Hz. However, these features can't be explained by the calculations from the deep subsurface structures. The estimation of site amplification factors in the frequency range of about 1.5-5 Hz are improved by introducing a shallow detailed structure down to GL-20m depth at a site. We also propose to consider random fluctuation in a modeling of deep S-wave velocity structure for broadband site amplification factor estimation. The Site amplification in the frequency range higher than about 5 Hz are filtered

Biomedical program at Space Biospheres Ventures

Science.gov (United States)

Walford, Roy

1990-01-01

There are many similarities and some important differences between potential health problems of Biosphere 2 and those of which might be anticipated for a space station or a major outpost on Mars. The demands of time, expense, and equipment would not readily allow medical evacuation from deep space for a serious illness or major trauma, whereas personnel can easily be evacuated from Biosphere 2 if necessary. Treatment facilities can be somewhat less inclusive, since distance would not compel the undertaking of heroic measures or highly complicated surgical procedures on site, and with personnel not fully trained for these procedures. The similarities are given between medical requirements of Biosphere 2 and the complex closed ecological systems of biospheres in space or on Mars. The major problems common to all these would seem to be trauma, infection, and toxicity. It is planned that minor and moderate degrees of trauma, including debridement and suturing of wounds, x ray study of fractures, will be done within Biosphere 2. Bacteriologic and fungal infections, and possibly allergies to pollen or spores are expected to be the commonest medical problem within Biosphere 2.

A Biosphere Assessment: Influence due to Geosphere-Biosphere Interfaces

International Nuclear Information System (INIS)

Lee, Youn Myoung; Hwang, Yong Soo

2009-01-01

influenced by the other GBI scheme, which is the case all possible surface and subsurface water bodies, such as aquifer, river water and marine water that are incorporated in the GBIs, showing some discrepancy for almost all the nuclides even though exposures for two other exposure groups, which means GBI scheme is very important and it should be carefully treated and modeled for the biosphere modeling

Surface and subsurface conditions in permafrost areas - a literature review

International Nuclear Information System (INIS)

Vidstrand, Patrik

2003-02-01

This report contains a summary of some of the information within existing technical and scientific literature on permafrost. Permafrost is viewed as one of the future climate driven process domains that may exist in Scandinavia, and that may give rise to significantly different surface and subsurface conditions than the present. Except for changes in the biosphere, permafrost may impact hydraulic, mechanical, and chemical subsurface processes and conditions. Permafrost and its influences on the subsurface conditions are thus of interest for the performance and safety assessments of deep geological waste repositories. The definition of permafrost is 'ground that stays at or below 0 deg C for at least two consecutive years'. Permafrost will effect the geological subsurface to some depth. How deep the permafrost may grow is a function of the heat balance, thermal conditions at the surface and within the ground, and the geothermal heat flux from the Earth's inner parts. The main chapters of the report summaries the knowledge on permafrost evolution, occurrence and distribution, and extracts information concerning hydrology and mechanical and chemical impacts due to permafrost related conditions. The results of a literature review are always dependent on the available literature. Concerning permafrost there is some literature available from investigations in the field of long-term repositories and some from mining industries. However, reports of these investigations are few and the bulk of permafrost literature comes from the science departments concerned with surficial processes (e.g. geomorphology, hydrology, agriculture, etc) and from engineering concerns, such as foundation of constructions and pipeline design. This focus within the permafrost research inevitably yields a biased but also an abundant amount of information on localised surficial processes and a limited amount on regional and deep permafrost characteristics. Possible conclusions are that there is

Surface and subsurface conditions in permafrost areas - a literature review

Energy Technology Data Exchange (ETDEWEB)

Vidstrand, Patrik [Bergab, Goeteborg (Sweden)

2003-02-01

This report contains a summary of some of the information within existing technical and scientific literature on permafrost. Permafrost is viewed as one of the future climate driven process domains that may exist in Scandinavia, and that may give rise to significantly different surface and subsurface conditions than the present. Except for changes in the biosphere, permafrost may impact hydraulic, mechanical, and chemical subsurface processes and conditions. Permafrost and its influences on the subsurface conditions are thus of interest for the performance and safety assessments of deep geological waste repositories. The definition of permafrost is 'ground that stays at or below 0 deg C for at least two consecutive years'. Permafrost will effect the geological subsurface to some depth. How deep the permafrost may grow is a function of the heat balance, thermal conditions at the surface and within the ground, and the geothermal heat flux from the Earth's inner parts. The main chapters of the report summaries the knowledge on permafrost evolution, occurrence and distribution, and extracts information concerning hydrology and mechanical and chemical impacts due to permafrost related conditions. The results of a literature review are always dependent on the available literature. Concerning permafrost there is some literature available from investigations in the field of long-term repositories and some from mining industries. However, reports of these investigations are few and the bulk of permafrost literature comes from the science departments concerned with surficial processes (e.g. geomorphology, hydrology, agriculture, etc) and from engineering concerns, such as foundation of constructions and pipeline design. This focus within the permafrost research inevitably yields a biased but also an abundant amount of information on localised surficial processes and a limited amount on regional and deep permafrost characteristics. Possible conclusions are that

The biosphere: current status

International Nuclear Information System (INIS)

Thorne, M.C.

1988-06-01

This paper outlines the biosphere models and data required to assess the post-closure radiological impact of deep geological repositories for low and intermediate level radioactive wastes. It then goes on to show how these requirements are being met either within the Nirex Safety Assessment Research Programme or from other research programmes. (Author)

Temperature Limit of the Deep Subseafloor Biosphere in the Nankai Trough Subduction Zone off Cape Muroto (IODP T-Limit Expedition 370)

Science.gov (United States)

Morono, Y.; Hauer, V. B.; Inagaki, F.; Kubo, Y.; Maeda, L.; Scientists, E.

2017-12-01

Expedition 370 of the International Ocean Discovery Program (IODP) aimed to explore the limits of life in the deep subseafloor biosphere at a location where elevated heat flow lets temperature increase with sediment depth beyond the known maximum of microbial life ( 120°C) at 1.2 km below the seafloor. Such conditions are met in the protothrust zone of the Nankai Trough off Cape Muroto, Japan, where Site C0023 was established in the vicinity of ODP Sites 808 and 1174 at a water depth of 4776 m using the drilling vessel DV Chikyu. Hole C0023A was cored down to a total depth of 1180 meters below seafloor, offshore sampling and research was combined with simultaneous shore-based investigations at the Kochi Core Center (KCC), and long-term temperature observations were started (Heuer et al., 2017). The primary scientific objectives of Expedition 370 are (a) to detect and investigate the presence or absence of life and biological processes at the biotic-abiotic transition of the deep subseafloor with unprecedented analytical sensitivity and precision; (b) to comprehensively study the factors that control biomass, activity, and diversity of microbial communities; and (c) to elucidate if continuous or episodic flow of fluids containing thermogenic and/or geogenic nutrients and energy substrates support subseafloor microbial communities in the Nankai Trough accretionary complex (Hinrichs et al., 2016). This contribution will highlight the scientific approach of our field-work and preliminary expedition results by shipboard and shorebased activities. Hinrichs K-U, Inagaki F, Heuer VB, Kinoshita M, Morono Y, Kubo Y (2016) Expedition 370 Scientific Prospectus: T-Limit of the Deep Biosphere off Muroto (T-Limit). International Ocean Discovery Program. http://dx.doi.org/10.14379/iodp.sp.370.2016 Heuer VB, Inagaki F, Morono Y, Kubo Y, Maeda L, the Expedition 370 Scientists (2017) Expedition 370 Preliminary Report: Temperature Limit of the Deep Biosphere off Muroto. International

Microbiological characterization of deep geological compartments

International Nuclear Information System (INIS)

Barsotti, V.; Sergeant, C.; Vesvres, M.H.; Coulon, S.; Joulian, C.; Garrido, F.; Ollivier, B.

2012-01-01

Document available in extended abstract form only. Microbial life in deep sediments and Earth's crust is now acknowledged by the scientific world. The deep subsurface biosphere contributes significantly to fundamental biogeochemical processes. However, despite great advances in geo-microbiological studies, deep terrestrial ecosystems are microbiologically poorly understood, mainly due to their inaccessibility. The drilling down to the base of the Triassic (1980 meters deep) in the geological formations of the eastern Paris Basin performed by ANDRA (EST433) in 2008 provides us a good opportunity to explore the deep biosphere. We conditioned the samples on the coring site, in as aseptic conditions as possible. In addition to storage at atmospheric pressure, a portion of the four Triassic samples was placed in a 190 bars pressurized chamber to investigate the influence of the conservation pressure factor on the found microflora. In parallel, in order to evaluate a potential bacterial contamination of the cores by the drilling fluids, samples of mud just before each sample drilling were taken and analyzed. The microbial exploration can be divided in two parts: - A cultural approach in different culture media for metabolic groups as methanogens, fermenters and sulphate reducing bacteria to stimulate their growth and to isolate microbial cells still viable. - A molecular approach by direct extraction of genomic DNA from the geological samples to explore a larger biodiversity. The limits are here the difficulties to extract DNA from these low biomass containing rocks. After comparison and optimization of several DNA extraction methods, the bacterial diversity present in rock cores was analyzed using DGGE (Denaturating Gel Gradient Electrophoresis) and cloning. The detailed results of all these investigations will be presented: - Despite all 400 cultural conditions experimented (with various media, salinities, temperatures, conservation pressure, agitation), no viable and

Deep sequencing of subseafloor eukaryotic rRNA reveals active Fungi across marine subsurface provinces.

Directory of Open Access Journals (Sweden)

William Orsi

Full Text Available The deep marine subsurface is a vast habitat for microbial life where cells may live on geologic timescales. Because DNA in sediments may be preserved on long timescales, ribosomal RNA (rRNA is suggested to be a proxy for the active fraction of a microbial community in the subsurface. During an investigation of eukaryotic 18S rRNA by amplicon pyrosequencing, unique profiles of Fungi were found across a range of marine subsurface provinces including ridge flanks, continental margins, and abyssal plains. Subseafloor fungal populations exhibit statistically significant correlations with total organic carbon (TOC, nitrate, sulfide, and dissolved inorganic carbon (DIC. These correlations are supported by terminal restriction length polymorphism (TRFLP analyses of fungal rRNA. Geochemical correlations with fungal pyrosequencing and TRFLP data from this geographically broad sample set suggests environmental selection of active Fungi in the marine subsurface. Within the same dataset, ancient rRNA signatures were recovered from plants and diatoms in marine sediments ranging from 0.03 to 2.7 million years old, suggesting that rRNA from some eukaryotic taxa may be much more stable than previously considered in the marine subsurface.

Safety analysis in subsurface repositories

International Nuclear Information System (INIS)

1985-06-01

The development of mathematical models to represent the repository-geosphere-biosphere system, and the development of a structure for data acquisition, processing, and use to analyse the safety of subsurface repositories, are presented. To study the behavior of radionuclides in geosphere a laboratory to determine the hydrodynamic dispersion coefficient was constructed. (M.C.K.) [pt

Doses in various parts of the biosphere due to long-lived radionuclides originating from deep geological repositories

International Nuclear Information System (INIS)

Bergstroem, U.; Karlsson, Sara; Nordlinder, S.

1999-01-01

Turnover of radionuclides and resulting doses to man were modelled for various parts of the biosphere. This was made for different scenarios of leakage of radionuclides from a deep geological repository for spent nuclear fuel and other waste. In previous studies, the emphasis was on doses from contaminated ground water represented by a well or various surface waters. This was because radionuclides were assumed to be released directly to surface water, the use of which subsequently formed the major pathway for radionuclides to agricultural areas. In the present study, radionuclides were considered to reach lakes, running waters, coastal areas, agricultural areas and peat areas. The inflow of radionuclides to agricultural areas was supposed to be from below. Doses due to direct use of contaminated ground water from a well were also considered. Altogether 44 radionuclides contained in the waste were assumed to be released during 10,000 years, with a rate of 1 Bq/year of each radionuclide, to each of the above mentioned biospheric parts. During that time, the biospheric conditions were assumed to be the same as they are today. Doses to the critical group were calculated by exposure pathways specific for each entry-point All calculations were performed with estimation of confidence due to time-dependent parameter variation and uncertainty in input values. The results indicate that drinking water from wells is not a critical exposure pathway for all studied radionuclides. Instead, inflow of contaminated water to soil and peat bogs may be crucial for illustration of doses for geological high-level waste disposal. Improved knowledge of processes at the geosphere-biosphere interface is therefore important

Microbial Communities of the Okinawa Backarc Basin Subvent Biosphere

Science.gov (United States)

Brandt, L. D.; House, C. H.

2014-12-01

IODP Expedition 331 to the Okinawa backarc basin provided an opportunity to study the microbial stratigraphy within the sediments surrounding a hydrothermal vent. The Okinawa backarc basin is a sedimented region of the seafloor located on a continental margin, and also hosts a hydrothermal network within the subsurface. Site C0014 within the Iheya North hydrothermal field is located 450 m east of the active vent and has a surface temperature of 5°C with no evidence of hydrothermal alteration within the top 10 m. Temperature increases with depth at an estimated rate of 3°C/m and transitions from non-hydrothermal margin sediments to a hydrothermally altered regime below 10 m. Site C0014 is a unique location to study changes in microbial communities with depth, as the hydrothermal system generates a thermally and geochemically restrictive subvent biosphere. In this study, we utilized deep 16S rRNA sequencing of DNA from IODP Expedition 331 Site C0014 sediment horizons in order to assess diversity throughout the sediment column as well as determine the potential limits of the biosphere. Analysis of the amplicon data suggests that Archaea represent a significant proportion of the indigenous community throughout the top 15 m of sediment, where Archaea then abruptly disappear. Furthermore, a deeper classification of Archaeal sequences suggests a transition from a mesophilic community to a potentially thermophilic one, where there is an increasingly stronger signal of Miscellaneous Crenarchaeotic Group (MCG) followed by Terrestrial Hot Spring Crenarchaeotic Group (THSCG). Additionally, there are several horizons in which methanotrophy is likely supported, indicated by peaks in anaerobic methanotrophic Archaea. The cessation of Archaea as well as Chloroflexi, a common marine subsurface bacterial phylum, at approximately 15 meters below seafloor (mbsf) is suggestive of a potential boundary within Site C0014 in which the environmental conditions have become too restrictive

Integrated geomechanical modelling for deep subsurface damage

NARCIS (Netherlands)

Wees, J.D. van; Orlic, B.; Zijl, W.; Jongerius, P.; Schreppers, G.J.; Hendriks, M.

2001-01-01

Government, E&P and mining industry increasingly demand fundamental insight and accurate predictions on subsurface and surface deformation and damage due to exploitation of subsurface natural resources, and subsurface storage of energy residues (e.g. CO2). At this moment deformation is difficult to

Marine Subsurface Microbial Communities Across a Hydrothermal Gradient in Okinawa Trough Sediments

Science.gov (United States)

Brandt, L. D.; Hser Wah Saw, J.; Ettema, T.; House, C. H.

2015-12-01

IODP Expedition 331 to the Okinawa backarc basin provided an opportunity to study the microbial stratigraphy within the sediments surrounding a hydrothermal vent. The Okinawa backarc basin is a sedimented region of the seafloor located on a continental margin, and also hosts a hydrothermal network within the subsurface. Site C0014 within the Iheya North hydrothermal field is located 450 m east of the active vent and has a surface temperature of 5°C with no evidence of hydrothermal alteration within the top 10 meters below sea floor (mbsf). Temperature increases with depth at an estimated rate of 3°C/m and transitions from non-hydrothermal margin sediments to a hydrothermally altered regime below 10 mbsf. In this study, we utilized deep 16S rRNA sequencing of DNA from IODP Expedition 331 Site C0014 sediment horizons in order to assess diversity throughout the sediment column as well as determine the potential limits of the biosphere. Analysis of the amplicon data shows a shift over 15 mbsf from a heterogeneous community of cosmopolitan marine subsurface taxa toward an archaeal-dominated community in the deepest horizons of the predicted biosphere. Notably, the phylum Chloroflexi represents a substantial taxon through most horizons, where it appears to be replaced below 10 mbsf by punctuations of thermophilic and methanotrophic Archaea and Miscellaneous Crenarchaeotic Group abundances. DNA from the aforementioned transition horizons was further analyzed using metagenomic sequencing. Preliminary taxonomic analysis of the metagenomic data agrees well with amplicon data in capturing the shift in relative abundance of Archaea increasing with depth. Additionally, reverse gyrase, a gene found exclusively in hyperthermophilic microorganisms, was recovered only in the metagenome of the deepest horizon. A BLAST search of this protein sequence against the GenBank non-redudnant protein database produced top hits with reverse gyrase from Thermococcus and Pyrococcus, which are

Anaerobic consortia of fungi and sulfate reducing bacteria in deep granite fractures.

Science.gov (United States)

Drake, Henrik; Ivarsson, Magnus; Bengtson, Stefan; Heim, Christine; Siljeström, Sandra; Whitehouse, Martin J; Broman, Curt; Belivanova, Veneta; Åström, Mats E

2017-07-04

The deep biosphere is one of the least understood ecosystems on Earth. Although most microbiological studies in this system have focused on prokaryotes and neglected microeukaryotes, recent discoveries have revealed existence of fossil and active fungi in marine sediments and sub-seafloor basalts, with proposed importance for the subsurface energy cycle. However, studies of fungi in deep continental crystalline rocks are surprisingly few. Consequently, the characteristics and processes of fungi and fungus-prokaryote interactions in this vast environment remain enigmatic. Here we report the first findings of partly organically preserved and partly mineralized fungi at great depth in fractured crystalline rock (-740 m). Based on environmental parameters and mineralogy the fungi are interpreted as anaerobic. Synchrotron-based techniques and stable isotope microanalysis confirm a coupling between the fungi and sulfate reducing bacteria. The cryptoendolithic fungi have significantly weathered neighboring zeolite crystals and thus have implications for storage of toxic wastes using zeolite barriers.Deep subsurface microorganisms play an important role in nutrient cycling, yet little is known about deep continental fungal communities. Here, the authors show organically preserved and partly mineralized fungi at 740 m depth, and find evidence of an anaerobic fungi and sulfate reducing bacteria consortium.

Microbial communities in the deep subsurface

Science.gov (United States)

Krumholz, Lee R.

The diversity of microbial populations and microbial communities within the earth's subsurface is summarized in this review. Scientists are currently exploring the subsurface and addressing questions of microbial diversity, the interactions among microorganisms, and mechanisms for maintenance of subsurface microbial communities. Heterotrophic anaerobic microbial communities exist in relatively permeable sandstone or sandy sediments, located adjacent to organic-rich deposits. These microorganisms appear to be maintained by the consumption of organic compounds derived from adjacent deposits. Sources of organic material serving as electron donors include lignite-rich Eocene sediments beneath the Texas coastal plain, organic-rich Cretaceous shales from the southwestern US, as well as Cretaceous clays containing organic materials and fermentative bacteria from the Atlantic Coastal Plain. Additionally, highly diverse microbial communities occur in regions where a source of organic matter is not apparent but where igneous rock is present. Examples include the basalt-rich subsurface of the Columbia River valley and the granitic subsurface regions of Sweden and Canada. These subsurface microbial communities appear to be maintained by the action of lithotrophic bacteria growing on H2 that is chemically generated within the subsurface. Other deep-dwelling microbial communities exist within the deep sediments of oceans. These systems often rely on anaerobic metabolism and sulfate reduction. Microbial colonization extends to the depths below which high temperatures limit the ability of microbes to survive. Energy sources for the organisms living in the oceanic subsurface may originate as oceanic sedimentary deposits. In this review, each of these microbial communities is discussed in detail with specific reference to their energy sources, their observed growth patterns, and their diverse composition. This information is critical to develop further understanding of subsurface

Physiologically anaerobic microorganisms of the deep subsurface

Energy Technology Data Exchange (ETDEWEB)

Stevens, S.E. Jr.; Chung, K.T.

1992-06-01

A variety of different media were used to isolate facultatively (FAB) and obligately anaerobic bacteria (OAB). These bacteria were isolated from core subsamples obtained from boreholes at the Idaho National Engineering Lab. (INEL) or at the Hanford Lab. (Yakima). Core material was sampled at various depths to 600 feet below the surface. All core samples with culturable bacteria contained at least FAB making thisthe most common physiological type of anaerobic bacteria present in the deep subsurface at these two sites. INEL core samples are characterized by isolates of both FAB and OAB. No isolates of acetogenic, methanogenic, or sulfate reducing bacteria were obtained. Yakima core samples are characterized by a marked predominance of FAB in comparison to OAB. In addition, isolates of acetogenic, methanogenic, and sulfate reducing bacteria were obtained. The Yakima site has the potential for complete anaerobic mineralization of organic compounds whereas this potential appears to be lacking at INEL.

Application of seismic interferometry to an exploration of subsurface structure by using microtremors. Estimation of deep ground structures in the Wakasa bay region

International Nuclear Information System (INIS)

Sato, Hiroaki; Kuriyama, Masayuki; Higashi, Sadanori; Shiba, Yoshiaki; Okazaki, Atsushi

2015-01-01

We carried out continuous measurements of microtremors to synthesize Green's function based on seismic interferometry in order to estimate deep subsurface structures of the Ohshima peninsula (OSM) and the Otomi peninsula (OTM) in the Wakasa bay region. Using more than 80 days of data, dispersive waveforms in the cross correlations were identified as a Green's function based on seismic interferometry. Rayleigh-wave phase velocities at OSM and OTM were estimated by two different method using microtremors: first, by analyzing microtremor array data, and second, by applying the f-k spectral analysis to synthesized Green's functions derived from cross-correlation with a common observation station. Relatively longer period of phase velocities were estimated by the f-k spectral analysis using the synthesized Green's functions with a common observation station. This suggests that the synthesized Green's functions from seismic interferometry can provide a valuable data for phase velocity inversion to estimate a deep subsurface structure. By identifying deep subsurface structures at OSM and OTM based on an inversion of phase velocity from both methods, the depth of S wave velocity of about 3.5 km/s, considered as a top of seismogenic layer, were determined to be 3.8 - 4.0 km at OSM and 4.4 - 4.6 km at OTM, respectively. Love- and Rayleigh-wave group velocities were estimated from the multiple filtering analysis of the synthesized Green's functions. From the comparison of observed surface wave group velocities and theoretical group velocities of OSM and OTM, we demonstrated that the observed group velocities were in good agreement with the average of theoretical group velocities calculated by identified deep subsurface structures at OSM and OTM. It is suggested that the deep subsurface structure of the shallow sea region between two peninsulas is continuous structure from OSM to OTM and that Love- and Rayleigh-wave group velocities using

Characterization of a Subsurface Biosphere in a Massive Sulfide Deposits at Rio Tinto, Spain: Implications for Extant Life on Mars

Science.gov (United States)

Stoker, C. R.; Stevens, T.; Amils, R.; Gomez-Elvira, J.; Rodriquez, N.; Gomez, F.; Gonzalez-Toril, E.; Aguilera, A.; Fernandez-Remolar, D.; Dunagan, S.

2005-01-01

The recent discovery of abundant sulfate minerals, particularly Jarosite by the Opportunity Rover at Sinus Merdiani on Mars has been interpreted as evidence for an acidic lake or sea on ancient Mars [1,2], since the mineral Jarosite is soluble in liquid water at pH above 4. The most likely mechanism to produce sufficient protons to acidify a large body of liquid water is near surface oxidation of pyrite rich deposits [3]. The acidic waters of the Rio Tinto, and the associated deposits of Hematite, Goethite, and Jarosite have been recognized as an important chemical analog to the Sinus Merdiani site on Mars [4]. The Rio Tinto is a river in southern Spain that flows 100 km from its source in the Iberian pyrite belt, one of the Earth s largest Volcanically Hosted Massive Sulfide (VHMS) provinces, into the Atlantic ocean. The river originates in artesian springs emanating from ground water that is acidified by the interaction with subsurface pyrite ore deposits. The Mars Analog Rio Tinto Experiment (MARTE) has been investigating the hypothesis that a subsurface biosphere exists at Rio Tinto living within the VHMS deposit living on chemical energy derived from sulfur and iron minerals. Reduced iron and sulfur might provide electron donors for microbial metabolism while in situ oxidized iron or oxidants entrained in recharge water might provide electron acceptors.

Characterization of a Subsurface Biosphere in a Massive Sulfide Deposit At Rio Tinto, Spain: Implications For Extant Life On Mars

Science.gov (United States)

Stoker, C. R.; Stevens, T.; Amils, R.; Gomez-Elvira, J.; Rodriguez, N.; Gomez, F.; Gonzalez-Toril, E.; Aguilera, A.; Fernandez-Remolar, D.; Dunagan, S.

2005-01-01

The recent discovery of abundant sulfate minerals, particularly Jarosite by the Opportunity Rover at Sinus Merdiani on Mars has been interpreted as evidence for an acidic lake or sea on ancient Mars [1,2], since the mineral Jarosite is soluble in liquid water at pH above 4. The most likely mechanism to produce sufficient protons to acidify a large body of liquid water is near surface oxidation of pyrite rich deposits [3]. The acidic waters of the Rio Tinto, and the associated deposits of Hematite, Goethite, and Jarosite have been recognized as an important chemical analog to the Sinus Merdiani site on Mars [4]. The Rio Tinto is a river in southern Spain that flows 100 km from its source in the Iberian pyrite belt, one of the Earth's largest Volcanically Hosted Massive Sulfide (VHMS) provinces, into the Atlantic ocean. The river originates in artesian springs emanating from ground water that is acidified by the interaction with subsurface pyrite ore deposits. The Mars Analog Rio Tinto Experiment (MARTE) has been investigating the hypothesis that a subsurface biosphere exists at Rio Tinto living within the VHMS deposit living on chemical energy derived from sulfur and iron minerals. Reduced iron and sulfur might provide electron donors for microbial metabolism while in situ oxidized iron or oxidants entrained in recharge water might provide electron acceptors.

Transfer into the biosphere of radionuclides released from deep storage of radioactive wastes. Bibliographical study

International Nuclear Information System (INIS)

Guedon, V.; Siclet, F.

1995-03-01

Most countries with civilian nuclear programs today are encountering difficulty in implementing a nuclear waste management policy that is both technically safe in the long term and accepted by the public. To meet both criteria, the solution most generally envisaged is deep storage either of untreated spent nuclear fuel or of highly radioactive wastes resulting from reprocessing. In order to predict the potential impact of such storage on man, one needs to understand the path followed by radionuclides in the geosphere, and later in the biosphere. Given the time scales involved and the critical nature of the elements concerned, it is indispensable to turn to mathematical modeling of the phenomena. This, however, does not preclude the essential need for in-depth knowledge of the phenomena and of the physico-chemical characteristics of radionuclides. This report presents what is hoped to be a complete inventory of the radionuclides contained in ''high level'' wastes (categories B AND C). The elements concerned in studies on deep storage are essentially long-life radionuclides (both actinides and certain fission and activation products). Their physico-chemical characteristics and their behavior in various ecological compartments are examined. Bibliographical data bearing on: solubility (in an oxidizing, reducing medium), distribution factors (water/rock-sediment-soil), concentration and transfer factors (in aquatic and terrestrial mediums), dose conversion factors (in the case of internal and external irradiation), principal paths of exposure for each radionuclide studied, are presented in this report. Initial results from international projects to model what happens to radionuclides in the biosphere are also presented. In general, they are optimistic as to the future, but nonetheless point to a need to improve the conceptual base of the models, to ensure that all major phenomena and processes are taken into consideration and to examine any possible amplification

Probabilistic calculations and sensitivity analysis of parameters for a reference biosphere model assessing the potential exposure of a population to radionuclides from a deep geological repository

Energy Technology Data Exchange (ETDEWEB)

Staudt, Christian; Kaiser, Jan Christian [Helmholtz Zentrum Muenchen, Institute of Radiation Protection, Munich (Germany); Proehl, Gerhard [International Atomic Energy Agency, Division of Radiation, Transport and Waste Safety, Wagramerstrasse 5, 1400 Vienna (Austria)

2014-07-01

Radioecological models are used to assess the exposure of hypothetical populations to radionuclides. Potential radionuclide sources are deep geological repositories for high level radioactive waste. Assessment time frames are long since releases from those repositories are only expected in the far future, and radionuclide migration to the geosphere biosphere interface will take additional time. Due to the long time frames, climate conditions at the repository site will change, leading to changing exposure pathways and model parameters. To identify climate dependent changes in exposure in the far field of a deep geological repository a range of reference biosphere models representing climate analogues for potential future climate states at a German site were developed. In this approach, model scenarios are developed for different contemporary climate states. It is assumed that the exposure pathways and parameters of the contemporary biosphere in the far field of the repository will change to be similar to those at the analogue sites. Since current climate models cannot predict climate developments over the assessment time frame of 1 million years, analogues for a range of realistically possible future climate conditions were selected. These climate states range from steppe to permafrost climate. As model endpoint Biosphere Dose conversion factors (BDCF) are calculated. The radionuclide specific BDCF describe the exposure of a population to radionuclides entering the biosphere in near surface ground water. The BDCF are subject to uncertainties in the exposure pathways and model parameters. In the presented work, probabilistic and sensitivity analysis was used to assess the influence of model parameter uncertainties on the BDCF and the relevance of individual parameters for the model result. This was done for the long half-live radionuclides Cs-135, I-129 and U-238. In addition to this, BDCF distributions for nine climate reference regions and several scenarios were

Extended biosphere dataset for safety assessment of radioactive waste geological disposal

International Nuclear Information System (INIS)

Kato, Tomoko; Suzuki, Yuji

2007-01-01

JAEA has an on-going programme of research and development relating to the safety assessment of the deep geological disposal systems of high-level radioactive waste (HLW) and transuranic waste (TRU). In the safety assessment of HLW and TRU disposal systems, biosphere assessment is necessary to estimate future radiological impacts on human beings (e.g. radiation dose). In order to estimate radiation dose, consideration needs to be given to the biosphere into which future releases of radionuclides might occur and to the associated future human behaviour. The data of some biosphere parameters needed to be updated by appropriate data sources for generic and site-specific biosphere assessment to improve reliability for the biosphere assessment, because some data published in the 1980's or the early 90's were found to be inappropriate for the recent biosphere assessment. Therefore, data of the significant parameters (especially for element-dependent) were set up on the basis of recent information, to update the generic biosphere dataset. (author)

Physiologically anaerobic microorganisms of the deep subsurface

International Nuclear Information System (INIS)

Stevens, S.E. Jr.; Chung, K.T.

1993-10-01

Anaerobic bacteria were isolated from deep subsurface sediment samples taken at study sites in Idaho (INEL) and Washington (HR) by culturing on dilute and concentrated medium. Morphologically distinct colonies were purified, and their responses to 21 selected physiological tests were determined. Although the number of isolates was small (18 INEL, 27 HR) some general patterns could be determined. Most strains could utilize all the carbon sources, however the glycerol and melizitose utilization was positive for 50% or less of the HR isolates. Catalase activity (27.78% at INEL, 74.07% at HR) and tryptophan metabolism (11.12% at INEL, 40.74% at HR) were significantly different between the two study sites. MPN and viable counts indicate that sediments near the water table yield the greatest numbers of anaerobes. Deeper sediments also appear to be more selective with the greatest number of viable counts on low-nutrient mediums. Likewise, only strictly obligate anaerobes were found in the deepest sediment samples. Selective media indicated the presence of methanogens, acetogens, and sulfate reducers at only the HR site

Active subsurface cellular function in the Baltic Sea Basin, IODP Exp 347

Science.gov (United States)

Reese, B. K.; Zinke, L. A.; Bird, J. T.; Lloyd, K. G.; Marshall, I.; Amend, J.; Jørgensen, B. B.

2016-12-01

The Baltic Sea Basin is a unique depositional setting that has experienced periods of glaciation and deglaciation as a result of global temperature fluctuations over the course of several hundred thousand years. This has resulted in laminated sediments formed during periods with strong permanent salinity stratification. The high sedimentation rates (100-500 cm/1000 y) make this an ideal setting to understand the microbial structure of a deep biosphere community in a high-organic matter environment. The responses of deep sediment microbial communities to variations in conditions during and after deposition are poorly understood. Samples were collected through scientific drilling during the International Ocean Discovery Program (IODP) Expedition 347 on board the Greatship Manisha, September-November 2013. We examined the active microbial community structure using the 16S rRNA gene transcript and active functional genes through metatranscriptome sequencing. Major biogeochemical shifts have been observed in response to the depositional history between the limnic, brackish, and marine phases. The microbial community structure in the BSB is diverse and reflective of the unique changes in the geochemical profile. These data further define the existence life in the deep subsurface and the survival mechanisms required for this extreme environment.

Subsurface microbial diversity in deep-granitic-fracture water in Colorado

Science.gov (United States)

Sahl, J.W.; Schmidt, R.; Swanner, E.D.; Mandernack, K.W.; Templeton, A.S.; Kieft, Thomas L.; Smith, R.L.; Sanford, W.E.; Callaghan, R.L.; Mitton, J.B.; Spear, J.R.

2008-01-01

A microbial community analysis using 16S rRNA gene sequencing was performed on borehole water and a granite rock core from Henderson Mine, a >1,000-meter-deep molybdenum mine near Empire, CO. Chemical analysis of borehole water at two separate depths (1,044 m and 1,004 m below the mine entrance) suggests that a sharp chemical gradient exists, likely from the mixing of two distinct subsurface fluids, one metal rich and one relatively dilute; this has created unique niches for microorganisms. The microbial community analyzed from filtered, oxic borehole water indicated an abundance of sequences from iron-oxidizing bacteria (Gallionella spp.) and was compared to the community from the same borehole after 2 weeks of being plugged with an expandable packer. Statistical analyses with UniFrac revealed a significant shift in community structure following the addition of the packer. Phospholipid fatty acid (PLFA) analysis suggested that Nitrosomonadales dominated the oxic borehole, while PLFAs indicative of anaerobic bacteria were most abundant in the samples from the plugged borehole. Microbial sequences were represented primarily by Firmicutes, Proteobacteria, and a lineage of sequences which did not group with any identified bacterial division; phylogenetic analyses confirmed the presence of a novel candidate division. This "Henderson candidate division" dominated the clone libraries from the dilute anoxic fluids. Sequences obtained from the granitic rock core (1,740 m below the surface) were represented by the divisions Proteobacteria (primarily the family Ralstoniaceae) and Firmicutes. Sequences grouping within Ralstoniaceae were also found in the clone libraries from metal-rich fluids yet were absent in more dilute fluids. Lineage-specific comparisons, combined with phylogenetic statistical analyses, show that geochemical variance has an important effect on microbial community structure in deep, subsurface systems. Copyright ?? 2008, American Society for Microbiology

Subsurface microbial habitats on Mars

Science.gov (United States)

Boston, P. J.; Mckay, C. P.

1991-01-01

We developed scenarios for shallow and deep subsurface cryptic niches for microbial life on Mars. Such habitats could have considerably prolonged the persistence of life on Mars as surface conditions became increasingly inhospitable. The scenarios rely on geothermal hot spots existing below the near or deep subsurface of Mars. Recent advances in the comparatively new field of deep subsurface microbiology have revealed previously unsuspected rich aerobic and anaerobic microbal communities far below the surface of the Earth. Such habitats, protected from the grim surface conditions on Mars, could receive warmth from below and maintain water in its liquid state. In addition, geothermally or volcanically reduced gases percolating from below through a microbiologically active zone could provide the reducing power needed for a closed or semi-closed microbial ecosystem to thrive.

Biosphere data base revision

International Nuclear Information System (INIS)

Bergstroem, U.; Andersson, K.; Sundblad, B.

1985-12-01

The turnover of long-lived radionuclides in the biosphere has been modelled some time ago and the exposure to man was calculated. The nuclides were long-lived actinides and fission products leaking from a simulated deep rock repository for spent nuclear fuel. The data base for these calculations has been updated in the present work and in addition a number of nuclides that were not included in the earlier work have been treated. (G.B.)

Microbial Diversity in Hydrothermal Surface to Sub-surface Environment of Suiyo Seamount

Science.gov (United States)

Higashi, Y.; Sunamura, M.; Kitamura, K.; Kurusu, Y.; Nakamura, K.; Maruyama, A.

2002-12-01

After excavation trials to a hydrothermal subsurface biosphere of the Suiyo Seamount, Izu-Bonin Arc, microbial diversity was examined using samples collected from drilled boreholes and natural vents with an catheter-type in situ microbial entrapment/incubator. This instrument consisted of a heat-tolerant cylindrical pipe with entrapment of a titanium-mesh capsule, containing sterilized inorganic porous grains, on the tip. After 3-10 day deployment in venting fluids with the maximum temperatures from 156 to 305degC, Microbial DNA was extracted from the grains and a 16S rDNA region was amplified and sequenced. Through the phylogenetic analysis of total 72 Bacteria and 30 Archaea clones, we found three novel phylogenetic groups in this hydrothermal surface to subsurface biosphere. Some new clades within the epsilon-Proteobacteria, which seemed to be microaerophilic, moderate thermophilic, and/or sulfur oxidizing, were detected. Clones related to moderate thermophilic and photosynthetic microbes were found in grain-attached samples at collapsed borehole and natural vent sites. We also detected a new clade closely related to a hyperthermophilic Archaea, Methanococcus jannashii, which has the capability of growing autotrophically on hydrogen and producing methane. However, the later two phylogroups were estimated as below a detection limit in microscopic cell counting, i.e., fluorescence in situ hybridization and direct counting. Most of microbes in venting fluids were assigned to be Bacteria, but difficult in specifying them using any known probes. The environment must be notable in microbial and genetic resources, while the ecosystem seems to be mainly supported by chemosynthetic products through the microbial sulfur oxidation, as in most deep-sea hydrothermal systems.

Natural releases from contaminated groundwater, Example Reference Biosphere 2B

Energy Technology Data Exchange (ETDEWEB)

Simon, I. [CIEMAT/PIRA, Avda Complutense 22, 28040 Madrid (Spain)]. E-mail: isc@csn.es; Naito, M. [Nuclear Waste Management Organization of Japan (NUMO), 4-1-23 Shiba, Minato-ku, Tokyo, 108-0014 (Japan); Thorne, M.C. [Mike Thorne and Associates Limited, Abbotsleigh, Kebroyd Mount, Ripponden, Halifax, West Yorkshire HX6 3JA (United Kingdom); Walke, R. [Enviros QuantiSci, Building D5, Culham Science Centre, Culham, Oxfordshire OX14 3DB (United Kingdom)

2005-07-01

Safety assessment is a tool which, by means of an iterative procedure, allows the evaluation of the performance of a disposal system and its potential impact on human health and the environment. Radionuclides from a deep geological disposal facility may not reach the surface environment until many tens of thousands of years after closure of the facility. The BIOMASS Programme on BIOsphere Modelling and ASSessment developed Examples of 'Reference Biospheres' to illustrate the use of the methodology and to demonstrate how biosphere models can be developed and justified as being fit for purpose. The practical examples are also intended to be useful in their own right. The Example Reference Biosphere 2B presented here involves the consideration of alternative types of geosphere-biosphere interfaces and calculation of doses to members of hypothetical exposure groups arising from a wide range of exposure pathways within agricultural and semi-natural environments, but without allowing for evolution of the corresponding biosphere system. The example presented can be used as a generic analysis in some situations although it was developed around a relatively specific conceptual model. It should be a useful practical example, but the above numerical results are not intended to be understood as prescribed biosphere 'conversion factors'.

Natural releases from contaminated groundwater, Example Reference Biosphere 2B

International Nuclear Information System (INIS)

Simon, I.; Naito, M.; Thorne, M.C.; Walke, R.

2005-01-01

Safety assessment is a tool which, by means of an iterative procedure, allows the evaluation of the performance of a disposal system and its potential impact on human health and the environment. Radionuclides from a deep geological disposal facility may not reach the surface environment until many tens of thousands of years after closure of the facility. The BIOMASS Programme on BIOsphere Modelling and ASSessment developed Examples of 'Reference Biospheres' to illustrate the use of the methodology and to demonstrate how biosphere models can be developed and justified as being fit for purpose. The practical examples are also intended to be useful in their own right. The Example Reference Biosphere 2B presented here involves the consideration of alternative types of geosphere-biosphere interfaces and calculation of doses to members of hypothetical exposure groups arising from a wide range of exposure pathways within agricultural and semi-natural environments, but without allowing for evolution of the corresponding biosphere system. The example presented can be used as a generic analysis in some situations although it was developed around a relatively specific conceptual model. It should be a useful practical example, but the above numerical results are not intended to be understood as prescribed biosphere 'conversion factors'

Mars Analog Research and Technology Experiment (MARTE): A Simulated Mars Drilling Mission to Search for Subsurface Life at the Rio Tinto, Spain

Science.gov (United States)

Stoker, Carol; Lemke, Larry; Mandell, Humboldt; McKay, David; George, Jeffrey; Gomez-Alvera, Javier; Amils, Ricardo; Stevens, Todd; Miller, David

2003-01-01

The MARTE (Mars Astrobiology Research and Technology Experiment) project was selected by the new NASA ASTEP program, which supports field experiments having an equal emphasis on Astrobiology science and technology development relevant to future Astrobiology missions. MARTE will search for a hypothesized subsurface anaerobic chemoautotrophic biosphere in the region of the Tinto River in southwestern Spain while also demonstrating technology needed to search for a subsurface biosphere on Mars. The experiment is informed by the strategy for searching for life on Mars.

The deep-subsurface sulfate reducer Desulfotomaculum kuznetsovii employs two methanol-degrading pathways.

Science.gov (United States)

Sousa, Diana Z; Visser, Michael; van Gelder, Antonie H; Boeren, Sjef; Pieterse, Mervin M; Pinkse, Martijn W H; Verhaert, Peter D E M; Vogt, Carsten; Franke, Steffi; Kümmel, Steffen; Stams, Alfons J M

2018-01-16

Methanol is generally metabolized through a pathway initiated by a cobalamine-containing methanol methyltransferase by anaerobic methylotrophs (such as methanogens and acetogens), or through oxidation to formaldehyde using a methanol dehydrogenase by aerobes. Methanol is an important substrate in deep-subsurface environments, where thermophilic sulfate-reducing bacteria of the genus Desulfotomaculum have key roles. Here, we study the methanol metabolism of Desulfotomaculum kuznetsovii strain 17 T , isolated from a 3000-m deep geothermal water reservoir. We use proteomics to analyze cells grown with methanol and sulfate in the presence and absence of cobalt and vitamin B12. The results indicate the presence of two methanol-degrading pathways in D. kuznetsovii, a cobalt-dependent methanol methyltransferase and a cobalt-independent methanol dehydrogenase, which is further confirmed by stable isotope fractionation. This is the first report of a microorganism utilizing two distinct methanol conversion pathways. We hypothesize that this gives D. kuznetsovii a competitive advantage in its natural environment.

An extensive phase space for the potential martian biosphere.

Science.gov (United States)

Jones, Eriita G; Lineweaver, Charles H; Clarke, Jonathan D

2011-12-01

We present a comprehensive model of martian pressure-temperature (P-T) phase space and compare it with that of Earth. Martian P-T conditions compatible with liquid water extend to a depth of ∼310 km. We use our phase space model of Mars and of terrestrial life to estimate the depths and extent of the water on Mars that is habitable for terrestrial life. We find an extensive overlap between inhabited terrestrial phase space and martian phase space. The lower martian surface temperatures and shallower martian geotherm suggest that, if there is a hot deep biosphere on Mars, it could extend 7 times deeper than the ∼5 km depth of the hot deep terrestrial biosphere in the crust inhabited by hyperthermophilic chemolithotrophs. This corresponds to ∼3.2% of the volume of present-day Mars being potentially habitable for terrestrial-like life.

Biosphere model for assessing doses from nuclear waste disposal

International Nuclear Information System (INIS)

Zach, R.; Amiro, B.D.; Davis, P.A.; Sheppard, S.C.; Szekeley, J.G.

1994-01-01

The biosphere model, BIOTRAC, for predicting long term nuclide concentrations and radiological doses from Canada's nuclear fuel waste disposal concept of a vault deep in plutonic rock of the Canadian Shield is presented. This generic, boreal zone biosphere model is based on scenario analysis and systems variability analysis using Monte Carlo simulation techniques. Conservatism is used to bridge uncertainties, even though this creates a small amount of extra nuclide mass. Environmental change over the very long assessment period is mainly handled through distributed parameter values. The dose receptors are a critical group of humans and four generic non-human target organisms. BIOTRAC includes six integrated submodels and it interfaces smoothly with a geosphere model. This interface includes a bedrock well. The geosphere model defines the discharge zones of deep groundwater where nuclides released from the vault enter the biosphere occupied by the dose receptors. The size of one of these zones is reduced when water is withdrawn from the bedrock well. Sensitivity analysis indicates 129 I is by far the most important radionuclide. Results also show bedrock-well water leads to higher doses to man than lake water, but the former doses decrease with the size of the critical group. Under comparable circumstances, doses to the non-human biota are greater than those for man

Ciliates and the rare biosphere-community ecology and population dynamics.

Science.gov (United States)

Weisse, Thomas

2014-01-01

Application of deep sequencing technologies to environmental samples and some detailed morphological studies suggest that there is a vast, yet unexplored rare ciliate biosphere, tentatively defined in terms of operational taxonomic units. However, very few studies complemented molecular and phylogenetic data with morphological and ecological descriptions of the species inventory. This is mainly because the sampling effort increases strongly with decreasing species abundance. In spite of this limited knowledge, it is clear that species that are rare under certain environmental conditions (temporal rare biosphere) may become abundant when the physical, chemical, and biological variables of their habitat change. Furthermore, some species may always be present in low numbers if their dispersal rates are exceedingly high (accidental rare biosphere). An intriguing question is whether there are some species that are always rare, i.e., in every suitable environment. This permanent rare biosphere is conceptually different from the temporal rare biosphere. This review characterizes typical aquatic habitats of the rare ciliate biosphere, portrays different scenarios under which some or even many species may be permanently rare (background fauna), and identifies some fundamental questions that need to be addressed to achieve a better understanding of the population dynamics of the rare ciliate biosphere. © 2014 The Authors The Journal of Eukaryotic Microbiology published by Wiley Periodicals, Inc. on behalf of International Society of Protistologists.

Microbial redox processes in deep subsurface environments and the potential application of (perchlorate in oil reservoirs

Directory of Open Access Journals (Sweden)

Martin G Liebensteiner

2014-09-01

Full Text Available The ability of microorganisms to thrive under oxygen-free conditions in subsurface environments relies on the enzymatic reduction of oxidized elements, such as sulfate, ferric iron or CO2, coupled to the oxidation of inorganic or organic compounds. A broad phylogenetic and functional diversity of microorganisms from subsurface environments has been described using isolation-based and advanced molecular ecological techniques. The physiological groups reviewed here comprise iron-, manganese- and nitrate-reducing microorganisms. In the context of recent findings also the potential of chlorate and perchlorate [jointly termed (perchlorate] reduction in oil reservoirs will be discussed. Special attention is given to elevated temperatures that are predominant in the deep subsurface. Microbial reduction of (perchlorate is a thermodynamically favorable redox process, also at high temperature. However, knowledge about (perchlorate reduction at elevated temperatures is still scarce and restricted to members of the Firmicutes and the archaeon Archaeoglobus fulgidus. By analyzing the diversity and phylogenetic distribution of functional genes in (metagenome databases and combining this knowledge with extrapolations to earlier-made physiological observations we speculate on the potential of (perchlorate reduction in the subsurface and more precisely oil fields. In addition, the application of (perchlorate for bioremediation, souring control and microbial enhanced oil recovery are addressed.

Transfer into the biosphere of radionuclides released from deep storage of radioactive wastes. Bibliographical study; Transfert dans la biosphere des radionucleides issus des stockages profonds de dechets radioactifs. Etude bibliographique

Energy Technology Data Exchange (ETDEWEB)

Guedon, V.; Siclet, F.

1995-03-01

Most countries with civilian nuclear programs today are encountering difficulty in implementing a nuclear waste management policy that is both technically safe in the long term and accepted by the public. To meet both criteria, the solution most generally envisaged is deep storage either of untreated spent nuclear fuel or of highly radioactive wastes resulting from reprocessing. In order to predict the potential impact of such storage on man, one needs to understand the path followed by radionuclides in the geosphere, and later in the biosphere. Given the time scales involved and the critical nature of the elements concerned, it is indispensable to turn to mathematical modeling of the phenomena. This report presents what is hoped to be a complete inventory of the radionuclides contained in ``high level`` wastes (categories B AND C). The elements concerned in studies on deep storage are essentially long-life radionuclides (both actinides and certain fission and activation products). Their physico-chemical characteristics and their behavior in various ecological compartments are examined. Bibliographical data bearing on: solubility (in an oxidizing, reducing medium), distribution factors (water/rock-sediment-soil), concentration and transfer factors (in aquatic and terrestrial mediums), dose conversion factors (in the case of internal and external irradiation), principal paths of exposure for each radionuclide studied, are presented in this report. Initial results from international projects to model what happens to radionuclides in the biosphere are also presented. In general, they are optimistic as to the future, but nonetheless point to a need to improve the conceptual base of the models, to ensure that all major phenomena and processes are taken into consideration and to examine any possible amplification (author). 67 refs., 39 figs., 20 tabs.

Biosphere transport and radiation dose calculations resulting from radioactive waste stored in deep salt formation (PACOMA-project)

International Nuclear Information System (INIS)

Jong, E.J. de; Koester, H.W.; Vries, W.J. de; Lembrechts, J.F.

1990-03-01

Parts are presented of the results of a safety-assessment study of disposal of medium and low level radioactive waste in salt formations in the Netherlands. The study concerns several disposal concepts for 2 kinds of salt formation, a deep dome and a shallow dome. 7 cases were studied with the same Dutch inventory and 1 with a reference inventory R, in order to compare results with those of other PACOMA participants. The total activity of the reference inventory R is 30 percent lower than the Dutch inventory, but some long living nuclides such as I-129, Np-237 and U-238 have a considerably higher activity. This reference inventor R has been combined with the disposal concept of mined cavities in a shallow salt dome. In each case. the released fraction of stored radio-nuclides moves gradually with water through the geosphere to the bio-sphere where it enters a river. River water is used for sprinkler irrigation and for drinking by man and livestock. The dispersal of the radionuclides into the biosphere is calculated with the BIOS program of the NRPB. Subroutines linked to the program add doses via different pathways to obtain a maximum individual dose, a collective dose and an integrated collective dose. This study presents results of these calculations. (author). 11 refs.; 39 figs.; 111 tabs

Radioactive iodine waste. 8. Biosphere assessment of I-129 released to deep marine seabed

International Nuclear Information System (INIS)

Miki, Takahito; Yoshida, Hideji; Ikeda, Takao

1999-01-01

Biosphere model for I-129 repository constructed under coastal seabed was developed in this study. The result showed that dose conversion factor for the repository was much less than that of biosphere model which was developed for the river discharge case. This was due to the much amount of dilution by seawater and limited exposure pathway.(author)

The Serpentinite Subsurface Microbiome

Science.gov (United States)

Schrenk, M. O.; Nelson, B. Y.; Brazelton, W. J.

2011-12-01

Microbial habitats hosted in ultramafic rocks constitute substantial, globally-distributed portions of the subsurface biosphere, occurring both on the continents and beneath the seafloor. The aqueous alteration of ultramafics, in a process known as serpentinization, creates energy rich, high pH conditions, with low concentrations of inorganic carbon which place fundamental constraints upon microbial metabolism and physiology. Despite their importance, very few studies have attempted to directly access and quantify microbial activities and distributions in the serpentinite subsurface microbiome. We have initiated microbiological studies of subsurface seeps and rocks at three separate continental sites of serpentinization in Newfoundland, Italy, and California and compared these results to previous analyses of the Lost City field, near the Mid-Atlantic Ridge. In all cases, microbial cell densities in seep fluids are extremely low, ranging from approximately 100,000 to less than 1,000 cells per milliliter. Culture-independent analyses of 16S rRNA genes revealed low-diversity microbial communities related to Gram-positive Firmicutes and hydrogen-oxidizing bacteria. Interestingly, unlike Lost City, there has been little evidence for significant archaeal populations in the continental subsurface to date. Culturing studies at the sites yielded numerous alkaliphilic isolates on nutrient-rich agar and putative iron-reducing bacteria in anaerobic incubations, many of which are related to known alkaliphilic and subsurface isolates. Finally, metagenomic data reinforce the culturing results, indicating the presence of genes associated with organotrophy, hydrogen oxidation, and iron reduction in seep fluid samples. Our data provide insight into the lifestyles of serpentinite subsurface microbial populations and targets for future quantitative exploration using both biochemical and geochemical approaches.

Biospheric theory and report on overall Biosphere 2 design and performance.

Science.gov (United States)

Allen, J

1997-01-01

This article reviews the structural complexity of Biospheres as well as Vernadsky's two laws of biospherics generalized into laws of thermodynamics. The history of designing and building apparatuses to test biospheric hypothesis are summarized: Drs. Shepelev and Gitelson's experiments in Russia, and Space Biospheres Ventures' 10,974 ft3 Test Module and 3.15-acre Biosphere 2 systems. Critical parameters in building Biosphere 2 are outlined: species lists, state descriptors, ecosystems, key variables, closure, and the necessity of observer-managers. Some results of the 2-year Mission One experiment in Biosphere 2 are summarized: human health, light-CO2 coupling, food production, redundancy in maintenance. Change made to the Biosphere 2 system after the first 2-year mission and before the start-up of the second mission are listed. As well, the future of artificial biospheres is considered.

Deep subsurface drip irrigation using coal-bed sodic water: part II. geochemistry

Science.gov (United States)

Bern, Carleton R.; Breit, George N.; Healy, Richard W.; Zupancic, John W.

2013-01-01

Waters with low salinity and high sodium adsorption ratios (SARs) present a challenge to irrigation because they degrade soil structure and infiltration capacity. In the Powder River Basin of Wyoming, such low salinity (electrical conductivity, EC 2.1 mS cm-1) and high-SAR (54) waters are co-produced with coal-bed methane and some are used for subsurface drip irrigation(SDI). The SDI system studied mixes sulfuric acid with irrigation water and applies water year-round via drip tubing buried 92 cm deep. After six years of irrigation, SAR values between 0 and 30 cm depth (0.5-1.2) are only slightly increased over non-irrigated soils (0.1-0.5). Only 8-15% of added Na has accumulated above the drip tubing. Sodicity has increased in soil surrounding the drip tubing, and geochemical simulations show that two pathways can generate sodic conditions. In soil between 45-cm depth and the drip tubing, Na from the irrigation water accumulates as evapotranspiration concentrates solutes. SAR values >12, measured by 1:1 water-soil extracts, are caused by concentration of solutes by factors up to 13. Low-EC (-1) is caused by rain and snowmelt flushing the soil and displacing ions in soil solution. Soil below the drip tubing experiences lower solute concentration factors (1-1.65) due to excess irrigation water and also contains relatively abundant native gypsum (2.4 ± 1.7 wt.%). Geochemical simulations show gypsum dissolution decreases soil-water SAR to 14 and decreasing EC in soil water to 3.2 mS cm-1. Increased sodicity in the subsurface, rather than the surface, indicates that deep SDI can be a viable means of irrigating with sodic waters.

Subsurface Hybrid Power Options for Oil & Gas Production at Deep Ocean Sites

Energy Technology Data Exchange (ETDEWEB)

Farmer, J C; Haut, R; Jahn, G; Goldman, J; Colvin, J; Karpinski, A; Dobley, A; Halfinger, J; Nagley, S; Wolf, K; Shapiro, A; Doucette, P; Hansen, P; Oke, A; Compton, D; Cobb, M; Kopps, R; Chitwood, J; Spence, W; Remacle, P; Noel, C; Vicic, J; Dee, R

2010-02-19

An investment in deep-sea (deep-ocean) hybrid power systems may enable certain off-shore oil and gas exploration and production. Advanced deep-ocean drilling and production operations, locally powered, may provide commercial access to oil and gas reserves otherwise inaccessible. Further, subsea generation of electrical power has the potential of featuring a low carbon output resulting in improved environmental conditions. Such technology therefore, enhances the energy security of the United States in a green and environmentally friendly manner. The objective of this study is to evaluate alternatives and recommend equipment to develop into hybrid energy conversion and storage systems for deep ocean operations. Such power systems will be located on the ocean floor and will be used to power offshore oil and gas exploration and production operations. Such power systems will be located on the oceans floor, and will be used to supply oil and gas exploration activities, as well as drilling operations required to harvest petroleum reserves. The following conceptual hybrid systems have been identified as candidates for powering sub-surface oil and gas production operations: (1) PWR = Pressurized-Water Nuclear Reactor + Lead-Acid Battery; (2) FC1 = Line for Surface O{sub 2} + Well Head Gas + Reformer + PEMFC + Lead-Acid & Li-Ion Batteries; (3) FC2 = Stored O2 + Well Head Gas + Reformer + Fuel Cell + Lead-Acid & Li-Ion Batteries; (4) SV1 = Submersible Vehicle + Stored O{sub 2} + Fuel Cell + Lead-Acid & Li-Ion Batteries; (5) SV2 = Submersible Vehicle + Stored O{sub 2} + Engine or Turbine + Lead-Acid & Li-Ion Batteries; (6) SV3 = Submersible Vehicle + Charge at Docking Station + ZEBRA & Li-Ion Batteries; (7) PWR TEG = PWR + Thermoelectric Generator + Lead-Acid Battery; (8) WELL TEG = Thermoelectric Generator + Well Head Waste Heat + Lead-Acid Battery; (9) GRID = Ocean Floor Electrical Grid + Lead-Acid Battery; and (10) DOC = Deep Ocean Current + Lead-Acid Battery.

Biosphere Model Report

Energy Technology Data Exchange (ETDEWEB)

D. W. Wu

2003-07-16

The purpose of this report is to document the biosphere model, the Environmental Radiation Model for Yucca Mountain, Nevada (ERMYN), which describes radionuclide transport processes in the biosphere and associated human exposure that may arise as the result of radionuclide release from the geologic repository at Yucca Mountain. The biosphere model is one of the process models that support the Yucca Mountain Project (YMP) Total System Performance Assessment (TSPA) for the license application (LA), the TSPA-LA. The ERMYN model provides the capability of performing human radiation dose assessments. This report documents the biosphere model, which includes: (1) Describing the reference biosphere, human receptor, exposure scenarios, and primary radionuclides for each exposure scenario (Section 6.1); (2) Developing a biosphere conceptual model using site-specific features, events, and processes (FEPs), the reference biosphere, the human receptor, and assumptions (Section 6.2 and Section 6.3); (3) Building a mathematical model using the biosphere conceptual model and published biosphere models (Sections 6.4 and 6.5); (4) Summarizing input parameters for the mathematical model, including the uncertainty associated with input values (Section 6.6); (5) Identifying improvements in the ERMYN model compared with the model used in previous biosphere modeling (Section 6.7); (6) Constructing an ERMYN implementation tool (model) based on the biosphere mathematical model using GoldSim stochastic simulation software (Sections 6.8 and 6.9); (7) Verifying the ERMYN model by comparing output from the software with hand calculations to ensure that the GoldSim implementation is correct (Section 6.10); and (8) Validating the ERMYN model by corroborating it with published biosphere models; comparing conceptual models, mathematical models, and numerical results (Section 7).

Biosphere Model Report

Energy Technology Data Exchange (ETDEWEB)

M. A. Wasiolek

2003-10-27

The purpose of this report is to document the biosphere model, the Environmental Radiation Model for Yucca Mountain, Nevada (ERMYN), which describes radionuclide transport processes in the biosphere and associated human exposure that may arise as the result of radionuclide release from the geologic repository at Yucca Mountain. The biosphere model is one of the process models that support the Yucca Mountain Project (YMP) Total System Performance Assessment (TSPA) for the license application (LA), the TSPA-LA. The ERMYN model provides the capability of performing human radiation dose assessments. This report documents the biosphere model, which includes: (1) Describing the reference biosphere, human receptor, exposure scenarios, and primary radionuclides for each exposure scenario (Section 6.1); (2) Developing a biosphere conceptual model using site-specific features, events, and processes (FEPs), the reference biosphere, the human receptor, and assumptions (Section 6.2 and Section 6.3); (3) Building a mathematical model using the biosphere conceptual model and published biosphere models (Sections 6.4 and 6.5); (4) Summarizing input parameters for the mathematical model, including the uncertainty associated with input values (Section 6.6); (5) Identifying improvements in the ERMYN model compared with the model used in previous biosphere modeling (Section 6.7); (6) Constructing an ERMYN implementation tool (model) based on the biosphere mathematical model using GoldSim stochastic simulation software (Sections 6.8 and 6.9); (7) Verifying the ERMYN model by comparing output from the software with hand calculations to ensure that the GoldSim implementation is correct (Section 6.10); and (8) Validating the ERMYN model by corroborating it with published biosphere models; comparing conceptual models, mathematical models, and numerical results (Section 7).

Biosphere Model Report

International Nuclear Information System (INIS)

D. W. Wu

2003-01-01

The purpose of this report is to document the biosphere model, the Environmental Radiation Model for Yucca Mountain, Nevada (ERMYN), which describes radionuclide transport processes in the biosphere and associated human exposure that may arise as the result of radionuclide release from the geologic repository at Yucca Mountain. The biosphere model is one of the process models that support the Yucca Mountain Project (YMP) Total System Performance Assessment (TSPA) for the license application (LA), the TSPA-LA. The ERMYN model provides the capability of performing human radiation dose assessments. This report documents the biosphere model, which includes: (1) Describing the reference biosphere, human receptor, exposure scenarios, and primary radionuclides for each exposure scenario (Section 6.1); (2) Developing a biosphere conceptual model using site-specific features, events, and processes (FEPs), the reference biosphere, the human receptor, and assumptions (Section 6.2 and Section 6.3); (3) Building a mathematical model using the biosphere conceptual model and published biosphere models (Sections 6.4 and 6.5); (4) Summarizing input parameters for the mathematical model, including the uncertainty associated with input values (Section 6.6); (5) Identifying improvements in the ERMYN model compared with the model used in previous biosphere modeling (Section 6.7); (6) Constructing an ERMYN implementation tool (model) based on the biosphere mathematical model using GoldSim stochastic simulation software (Sections 6.8 and 6.9); (7) Verifying the ERMYN model by comparing output from the software with hand calculations to ensure that the GoldSim implementation is correct (Section 6.10); and (8) Validating the ERMYN model by corroborating it with published biosphere models; comparing conceptual models, mathematical models, and numerical results (Section 7)

Biosphere Model Report

Energy Technology Data Exchange (ETDEWEB)

D.W. Wu; A.J. Smith

2004-11-08

The purpose of this report is to document the biosphere model, the Environmental Radiation Model for Yucca Mountain, Nevada (ERMYN), which describes radionuclide transport processes in the biosphere and associated human exposure that may arise as the result of radionuclide release from the geologic repository at Yucca Mountain. The biosphere model is one of the process models that support the Yucca Mountain Project (YMP) Total System Performance Assessment (TSPA) for the license application (LA), TSPA-LA. The ERMYN provides the capability of performing human radiation dose assessments. This report documents the biosphere model, which includes: (1) Describing the reference biosphere, human receptor, exposure scenarios, and primary radionuclides for each exposure scenario (Section 6.1); (2) Developing a biosphere conceptual model using site-specific features, events, and processes (FEPs) (Section 6.2), the reference biosphere (Section 6.1.1), the human receptor (Section 6.1.2), and approximations (Sections 6.3.1.4 and 6.3.2.4); (3) Building a mathematical model using the biosphere conceptual model (Section 6.3) and published biosphere models (Sections 6.4 and 6.5); (4) Summarizing input parameters for the mathematical model, including the uncertainty associated with input values (Section 6.6); (5) Identifying improvements in the ERMYN compared with the model used in previous biosphere modeling (Section 6.7); (6) Constructing an ERMYN implementation tool (model) based on the biosphere mathematical model using GoldSim stochastic simulation software (Sections 6.8 and 6.9); (7) Verifying the ERMYN by comparing output from the software with hand calculations to ensure that the GoldSim implementation is correct (Section 6.10); (8) Validating the ERMYN by corroborating it with published biosphere models; comparing conceptual models, mathematical models, and numerical results (Section 7).

Biosphere Model Report

International Nuclear Information System (INIS)

D.W. Wu; A.J. Smith

2004-01-01

The purpose of this report is to document the biosphere model, the Environmental Radiation Model for Yucca Mountain, Nevada (ERMYN), which describes radionuclide transport processes in the biosphere and associated human exposure that may arise as the result of radionuclide release from the geologic repository at Yucca Mountain. The biosphere model is one of the process models that support the Yucca Mountain Project (YMP) Total System Performance Assessment (TSPA) for the license application (LA), TSPA-LA. The ERMYN provides the capability of performing human radiation dose assessments. This report documents the biosphere model, which includes: (1) Describing the reference biosphere, human receptor, exposure scenarios, and primary radionuclides for each exposure scenario (Section 6.1); (2) Developing a biosphere conceptual model using site-specific features, events, and processes (FEPs) (Section 6.2), the reference biosphere (Section 6.1.1), the human receptor (Section 6.1.2), and approximations (Sections 6.3.1.4 and 6.3.2.4); (3) Building a mathematical model using the biosphere conceptual model (Section 6.3) and published biosphere models (Sections 6.4 and 6.5); (4) Summarizing input parameters for the mathematical model, including the uncertainty associated with input values (Section 6.6); (5) Identifying improvements in the ERMYN compared with the model used in previous biosphere modeling (Section 6.7); (6) Constructing an ERMYN implementation tool (model) based on the biosphere mathematical model using GoldSim stochastic simulation software (Sections 6.8 and 6.9); (7) Verifying the ERMYN by comparing output from the software with hand calculations to ensure that the GoldSim implementation is correct (Section 6.10); (8) Validating the ERMYN by corroborating it with published biosphere models; comparing conceptual models, mathematical models, and numerical results (Section 7)

Chemotactic behavior of deep subsurface bacteria toward carbohydrates, amino acids and a chlorinated alkene

Energy Technology Data Exchange (ETDEWEB)

Lopez de Victoria, G. (Puerto Rico Univ., Rio Piedras (Puerto Rico). Dept. of Biology)

1989-02-01

The chemotactic behavior of deep terrestrial subsurface bacteria toward amino acids, carbohydrates and trichloroethylene was assayed using a modification of the capillary method and bacterial enumeration by acridine orange direct counts. Eleven isolates of bacteria isolated from six different geological formations were investigated. A bimodal response rather than an absolute positive or negative response was observed in most assays. Most of the isolates were positively chemotactic to low concentrations of substrates and were repelled by high concentrations of the same substrate. However, this was not the case for trichloroethylene (TCE) which was mostly an attractant and elicited the highest responses in all the isolates when compared with amino acids and carbohydrates. The movement rates of these isolates in aseptic subsurface sediments in the absence and presence of TCE were also determined using a laboratory model. All of the isolates showed distinct response range, peak, and threshold concentrations when exposed to the same substrates suggesting that they are possibly different species as has been inferred from DNA homology studies. 101 refs., 4 figs., 57 tabs.

Biosphere modelling for a deep radioactive waste repository: treatment of the groundwater-soil pathway

International Nuclear Information System (INIS)

Baeyens, B.; Grogan, H.A.; Dorp, F. van

1991-07-01

The effect of radionuclide transfer from near-surface groundwater to the rooting zone soil, via a deep soil layer, is modelled in this report. The possible extent of upward solute movement is evaluated for a region in northern Switzerland. The concentration of 237 Np and 129 I in the deep and top soil, and hence growing crops, are evaluated assuming a constant unit activity concentration in the groundwater. A number of parameter variations are considered, namely variable soil sorption coefficients, reduced infiltration of rain water and decreased groundwater flow. A release to an alternative smaller recipient region in northern Switzerland is also evaluated. For the parameter ranges considered uncertainty in the solid-liquid distribution coefficient has the largest effect on overall uncertainty. These calculations have been presented within the international Biosphere Model Validation Study (BIOMOVS). A description of the test scenario, and the model calculations submitted, have been included in this report for completeness. To place the groundwater-soil-crop-man pathway in context, its contribution to the total dose to man is evaluated for the 237 Np- 233 U- 229 Th decay chain. The results obtained using the two-layer soil model, described in this report, are compared with the single-layer soil model used during Project Gewaehr 1985. The more realistic two-layer soil model indicated an increase in importance of the drinking water pathway. It should be noted, however, that not all the critical pathways have been treated in this study with the same degree of conservatism. (author) 16 figs., 15 tabs., 31 refs

Biosphere modelling for safety assessment of geological disposal taking account of denudation of contaminated soils. Research document

International Nuclear Information System (INIS)

Kato, Tomoko

2003-03-01

Biosphere models for safety assessment of geological disposal have been developed on the assumption that the repository-derived radionuclides reach surface environment by groundwater. In the modelling, river, deep well and marine have been considered as geosphere-biosphere (GBIs) and some Japanese-specific ''reference biospheres'' have been developed using an approach consistent with the BIOMOVS II/BIOMASS Reference Biosphere Methodology. In this study, it is assumed that the repository-derived radionuclide would reach surface environment in the form of solid phase by uplift and erosion of contaminated soil and sediment. The radionuclides entered into the surface environment by these processes could be distributed between solid and liquid phases and could spread within the biosphere via solid phase and also liquid phase. Based on these concepts, biosphere model that considers variably saturated zone under surface soil (VSZ) as a GBI was developed for calculating the flux-to-dose conversion factors of three exposure groups (farming, freshwater fishing, marine fishing) based on the Reference Biosphere Methodology. The flux-to-dose conversion factors for faming exposure group were the highest, and ''inhalation of dust'', external irradiation from soil'' and ''ingestion of soil'' were the dominant exposure pathways for most of radionuclides considered in this model. It is impossible to compare the flux-to-dose conversion factors calculated by the biosphere model in this study with those calculated by the biosphere models developed in the previous studies because the migration processes considered when the radionuclides entered the surface environment through the aquifer are different among the models; i.e. it has been assumed that the repository-derived radionuclides entered the GBIs such as river, deep well and marine via groundwater without dilution and retardation at the aquifer in the previous biosphere models. Consequently, it must be modelled the migration of

Modelling the environmental transport of tritium in the vicinity of long term atmospheric and sub-surface sources. Report of the Tritium Working Group of the Biosphere Modelling and Assessment (BIOMASS) Programme, Theme 3

International Nuclear Information System (INIS)

2003-03-01

The IAEA Programme on BIOsphere Modelling and ASSessment (BIOMASS) was launched in Vienna in October 1996. The programme was concerned with developing and improving capabilities to predict the transfer of radionuclides in the environment. The programme had three themes: Theme 1: Radioactive Waste Disposal. The objective was to develop the concept of a standard or reference biosphere for application to the assessment of the long term safety of repositories for radioactive waste. Theme 2: Environmental Releases. BIOMASS provided an international forum for activities aimed at increasing the confidence in methods and models for the assessment of radiation exposure related to environmental releases. Two Working Groups addressed issues concerned with the reconstruction of radiation doses received by people from past releases of radionuclides to the environment and the evaluation of the efficacy of remedial measures. Theme 3: Biosphere Processes. The aim of this Theme was to improve capabilities for modelling the transfer of radionuclides in particular parts of the biosphere identified as being of potential radiological significance and where there were gaps in modelling approaches. This topic was explored using a range of methods including reviews of the literature, model inter-comparison exercises and, where possible, model testing against independent sources of data. Three Working Groups were established to examine the modelling of: (1) long term tritium dispersion in the environment; (2) radionuclide uptake by fruits; and (3) radionuclide migration and accumulation in forest ecosystems. This report describes results of the studies undertaken by the Tritium Working Group under Theme 3. It discusses the six model test exercises (three model-model intercomparisons and three model-data exercises) and the twenty-month field sampling programme undertaken to investigate the environmental transport of tritium in the vicinity of long term atmospheric and sub-surface sources

Poroelastic Parameters of Peru Margin Sediments: Implications for Flow and Transport at Multiple Scales in the Marine Biosphere

Science.gov (United States)

Gettemy, G. L.; Cikoski, C.; Tobin, H. J.

2004-12-01

As part of a broader investigation of the deep marine subsurface environment, the first biosphere-focused drilling expedition, Leg 201, of the Ocean Drilling Program (ODP) occupied five unique sites in the Peru Margin (in a 1200 km2 region centered at 10 S, 80E). These sites represent the entire range of shallow biogeological conditions associated with this convergent margin:deep-water, mixed clay-pelagic sediments ocean-ward of the trench; slope-apron and prism toe sediments at the deformation front; and several distinct lithostratigraphic sequences on the continental shelf. Microbial enumeration and pore-water geochemistry results show that each particular site is both consistent and unique--consistent in terms of general biotic quantity and activity as predicted by energy flux and redox potential given the depositional environment and sedimentary record, but unique at key biogeological boundaries such as lithologic and/or physical property interfaces. This research addresses questions related to our understanding of how and why these boundaries form by looking at poroelastic and hydrologic parameters measured at multiple scales, from sub-millimeter to several centimeters. The issue of measurement scale, especially in regard to permeability and diffusivity characterization, is vital to interpreting observations of biologically-mediated diagenetic fronts (e.g., dolomitic lenses, depth- or time-varying barite fronts). These parameters are derived from (i) hydrologic and wave propagation experiments, (ii) SEM images, and (iii) shipboard split-core measurements, and structured in a modified Biot poroelasticity framework. This approach also allows quantification of the local heterogeneity of these parameters at the scale applicable to (and controlled by) microbial life; these results can then be used to formulate predictive models of the impact of biogeochemical processes. Ultimately, these models could then be used in interpretation of new remote-sensed data (e

Integrated geomechanical modelling at TNO for assessement of deep subsurface risks

NARCIS (Netherlands)

Orlic, B.; Fokker, P.; Zijl, W.; Scheffers, B.

2001-01-01

Public authorities, E & P and the mining industry increasingly demand fundamental insight and accurate predictions on subsurface and surface deformation and damage due to exploitation of subsurface natural resources, and subsurface storage of energy residues (e.g. CO2). At this moment deformation is

Homoacetogenesis in Deep-Sea Chloroflexi, as Inferred by Single-Cell Genomics, Provides a Link to Reductive Dehalogenation in Terrestrial Dehalococcoidetes.

Science.gov (United States)

Sewell, Holly L; Kaster, Anne-Kristin; Spormann, Alfred M

2017-12-19

The deep marine subsurface is one of the largest unexplored biospheres on Earth and is widely inhabited by members of the phylum Chloroflexi In this report, we investigated genomes of single cells obtained from deep-sea sediments of the Peruvian Margin, which are enriched in such Chloroflexi 16S rRNA gene sequence analysis placed two of these single-cell-derived genomes (DscP3 and Dsc4) in a clade of subphylum I Chloroflexi which were previously recovered from deep-sea sediment in the Okinawa Trough and a third (DscP2-2) as a member of the previously reported DscP2 population from Peruvian Margin site 1230. The presence of genes encoding enzymes of a complete Wood-Ljungdahl pathway, glycolysis/gluconeogenesis, a Rhodobacter nitrogen fixation (Rnf) complex, glyosyltransferases, and formate dehydrogenases in the single-cell genomes of DscP3 and Dsc4 and the presence of an NADH-dependent reduced ferredoxin:NADP oxidoreductase (Nfn) and Rnf in the genome of DscP2-2 imply a homoacetogenic lifestyle of these abundant marine Chloroflexi We also report here the first complete pathway for anaerobic benzoate oxidation to acetyl coenzyme A (CoA) in the phylum Chloroflexi (DscP3 and Dsc4), including a class I benzoyl-CoA reductase. Of remarkable evolutionary significance, we discovered a gene encoding a formate dehydrogenase (FdnI) with reciprocal closest identity to the formate dehydrogenase-like protein (complex iron-sulfur molybdoenzyme [CISM], DET0187) of terrestrial Dehalococcoides/Dehalogenimonas spp. This formate dehydrogenase-like protein has been shown to lack formate dehydrogenase activity in Dehalococcoides/Dehalogenimonas spp. and is instead hypothesized to couple HupL hydrogenase to a reductive dehalogenase in the catabolic reductive dehalogenation pathway. This finding of a close functional homologue provides an important missing link for understanding the origin and the metabolic core of terrestrial Dehalococcoides/Dehalogenimonas spp. and of reductive

Biosphere science news roundup. The Center for Biospheric Education and Research

Science.gov (United States)

Cotten, J H

1994-01-01

The Center for Biospheric Education and Research (CBER) is an exciting and truly unique addition to The Huntsville-Madison County Botanical Garden. The mission of CBER is to increase the knowledge and understanding of closed ecological life support systems, including both natural and man-made biospheres. Its primary emphasis will be on the Earth biosphere with particular attention to the role of plants in maintaining a balanced environment. Secondary emphasis will be on the space station and lunar habitation biospheres, both of which employ plants for environmental control, food, and aesthetics. CBER will serve as a catalyst providing both a forum and a facility for research, education, and display of methodologies and technologies relevant to the creation and maintenance of such biospheric systems.

Factors affecting the release of radioactivity to the biosphere during deep geologic disposal of radioactive solids through underground water

International Nuclear Information System (INIS)

Solomah, A.G.

1984-01-01

The chemical alteration formed by ground water on the solidified radioactive waste during deep geologic disposal represents the most likely mechanism by which dangerous radioactive species could be reintroduced into the biosphere. Knowing the geologic history of the repository, the chemistry of the ground water and the mechanisms involved in the corrosion of the radioactive solids can provide help to predict the long-term stability of these materials. The factors that must be considered in order to assess the safety and the risk associated with such a disposal strategy are presented. The leaching behavior of a solidified radioactive waste form called SYNROC-B (SYNthetic ROCks) is discussed. Different simulated ground water brines similar to those of the repository sites were prepared and used as the leaching media in leaching experiments

Biosphere modelling for the safety assessment of high-level radioactive waste disposal in the Japanese H12 assessment

International Nuclear Information System (INIS)

Kato, Tomoko; Suzuki, Yuji; Ishiguro, Katsuhiko; Naito, Morimasa; Ishiguro, Katsuhiko; Ikeda, Takao; Little, Richard H.; Smith, Graham M.

2002-01-01

JNC has an on-going programme of research and development relating to the safety assessment of the deep geological disposal system of high-level radioactive waste (HLW). In the safety assessment of a HLW disposal system, it is often necessary to estimate future radiological impacts on human beings (e.g. radiation dose). In order to estimate dose, consideration needs to be given to the surface environment (biosphere) into which future releases of radionuclides might occur and to the associated future human behaviour. However, for a deep repository, such releases might not occur for many thousands of years after disposal. Over such timescales, it is not possible to predict with any certainty how the biosphere and human behaviour will evolve. To avoid endless speculation aimed at reducing such uncertainty, the reference biosphere le concept has been developed for use in the safety assessment of HLW disposal. The Reference Biospheres Methodology was originally developed by the BIOMOVS II Reference Biospheres Working Group and subsequently enhanced within Theme 1 of the BIOMASS programme. As the aim of the H12 assessment with a hypothetical HLW disposal system was to demonstrate the technical feasibility and reliability of the Japanese disposal concept for a range of geological and surface environments, some assessment specific reference biospheres were developed for the biosphere modelling in the H12 assessment using an approach consistent with the BIOMOVS II/BIOMASS approach. They have been used to derive factors to convert the radionuclide flux from a geosphere to a biosphere into a dose. The influx to dose conversion factor also have been derived for a range of different geosphere-biosphere interfaces (well, river and marine) and potential exposure groups (farming, freshwater-fishing and marine-fishing). This paper summarises the approach used for the derivation of the influx to dose conversion factor also for the range of geosphere-biosphere interfaces and

Interim report on reference biospheres for radioactive waste disposal

Energy Technology Data Exchange (ETDEWEB)

Dorp, F. van [NAGRA (Switzerland)] [and others

1994-10-01

Primary criteria for repository safety are commonly expressed in terms of risk or dose, and a biosphere model is required to evaluate the corresponding assessment endpoints. Even when other indicators are used to express the safety goals, a biosphere model is still needed in order to justify those indicators. In safety or performance assessments of a repository, the uncertainties in space and time for the different components of the repository system have to be considered. For the biosphere component, prediction of future human habits, in particular, is extremely uncertain. This is especially important in the assessment of deep geological disposal, which involves very long timescales, particularly for wastes containing very long lived radionuclides. Thus, the results of biosphere modelling should not be seen as predictions, but as illustrations of the consequences that may occur, should the postulated release occur today or under other conditions implied by the underlying biosphere model assumptions. Differences in biosphere modelling approaches arise because of differences in regulations, the nature of the wastes to be disposed of, disposal site characteristics, disposal concepts and purposes of the assessment. Differences in treatment of uncertainties can also arise. For example, if doses or risks are anticipated to be far below regulatory limits, assessments may be based upon simplified and, necessarily, conservative biosphere models. At present biosphere models used to assess radioactive waste disposal show significant differences in the features, events and processes (FEPs) included or excluded. In general, the reasons for these differences have not been well documented or explained. Developments in radioecology have implications for biosphere modelling for radioactive waste disposal. In particular, after the Chernobyl accident, radioecological research has been significantly increased. Results of this research are already having and will continue to have a

Interim report on reference biospheres for radioactive waste disposal

Energy Technology Data Exchange (ETDEWEB)

Dorp, F van [NAGRA (Switzerland); and others

1994-10-01

Primary criteria for repository safety are commonly expressed in terms of risk or dose, and a biosphere model is required to evaluate the corresponding assessment endpoints. Even when other indicators are used to express the safety goals, a biosphere model is still needed in order to justify those indicators. In safety or performance assessments of a repository, the uncertainties in space and time for the different components of the repository system have to be considered. For the biosphere component, prediction of future human habits, in particular, is extremely uncertain. This is especially important in the assessment of deep geological disposal, which involves very long timescales, particularly for wastes containing very long lived radionuclides. Thus, the results of biosphere modelling should not be seen as predictions, but as illustrations of the consequences that may occur, should the postulated release occur today or under other conditions implied by the underlying biosphere model assumptions. Differences in biosphere modelling approaches arise because of differences in regulations, the nature of the wastes to be disposed of, disposal site characteristics, disposal concepts and purposes of the assessment. Differences in treatment of uncertainties can also arise. For example, if doses or risks are anticipated to be far below regulatory limits, assessments may be based upon simplified and, necessarily, conservative biosphere models. At present biosphere models used to assess radioactive waste disposal show significant differences in the features, events and processes (FEPs) included or excluded. In general, the reasons for these differences have not been well documented or explained. Developments in radioecology have implications for biosphere modelling for radioactive waste disposal. In particular, after the Chernobyl accident, radioecological research has been significantly increased. Results of this research are already having and will continue to have a

Biosphere scenario development. An interim report of an SKI, SSI, SKB working group

International Nuclear Information System (INIS)

1989-11-01

The Swedish Nuclear Power Inspectorate and the Swedish Nuclear Fuel and Waste Management Co have initiated a project for the development of scenarios for the behaviour of radionuclides in high level waste following deep geological disposal. The main objective is to develop a general consensus of scenarios and conceptual models. Within the project a biosphere scenarios working group was initiated to consider specific questions of the biosphere. This report describes the results of the group's deliberations up to the end of July 1989. A methodology is presented for the development of biosphere scenarios which may be considered alongside scenarios for radionuclide behaviour in the near field and geosphere. Two major biosphere elements affecting processes in the surface environment have been recognised, climate and development. Alternative states for climate and level of development are suggested and each combination can be considered with one or more of a range of biosphere receptors, such as a river or a lake. The features, events and processes relevant to each receptor are presented. Consideration is then given to biosphere assumptions for both gradual and direct releases from the geosphere, as well as biosphere effects on the repository near field or geosphere. The amount of screening which can be done at this stage to limit the number of biosphere scenarios is small. However, considerable potential exists once more details are available for geosphere release scenarios. It may be appropriate to further develop biosphere scenarios, specific to each geosphere release scenario. It may also be appropriate to consider scenarios specifically in relation to the individual radionuclides which dominate geosphere releases. Both these possibilities could result in considerably reduced requirements for calculations

The Biosphere.

Science.gov (United States)

Cloud, Preston

1983-01-01

Discusses the earth's biosphere, considering how the microbial, animal and plant life (which make up the biosphere) are sustained by the earth's lithosphere, hydrosphere, and atmosphere. Also considers how these three earth features have powerfully shaped the evolution of these organisms. (JN)

Olkiluoto biosphere description 2006

International Nuclear Information System (INIS)

Haapanen, R.; Aro, L.; Ilvesniemi, H.; Kareinen, T.; Kirkkala, T.; Mykrae, S.; Turkki, H.; Lahdenperae, A.-M.; Ikonen, A.T.K.

2007-02-01

This report summarises the current knowledge of the biosphere of Olkiluoto, and it is the first Biosphere Description Report. The elements considered were climate, topography, land use, overburden, terrestrial vegetation and fauna and sea flora, fauna and water. The principal aim was to present a synthesis of the present state (now to 2020) and the main features of past evolution of the biosphere at the site using currently available data. The lack of site specific parameters and their importance was discussed. Conceptual ecosystem models are presented for land and sea. Currently available data made it possible to calculate the biomass of the terrestrial vegetation and further convert it to carbon. In the case of terrestrial animals, preliminary figures are given for moose alone due to lack of sitespecific data. For the same reason, the sea ecosystem model was not quantified within this work. The ecosystems on Olkiluoto do not deviate from the surrounding areas. Since mires are few on Olkiluoto, forests are the most important land ecosystem. However, coastal areas are the transition zones between land and sea, and also potential sites for deep groundwater discharge. The major interest concerning aquatic ecosystems was laid on four future lakes potentially developing from the sea due to the land up-lift. Current sea sediments near Olkiluoto are future land areas, and thus very important. Spatially, the forest ecosystems of Olkiluoto are now most comprehensively covered, while the temporal coverage is highest in sea ecosystems. Lack of data is greatest in terrestrial fauna and sea sediments. During this work, the system boundaries were crossed and the use of data over disciplines was started. The data were mostly in agreement, but some discrepancies were detected. To solve these, and to supplement the existing data, some recommendations were given. (orig.)

Genomic Evidence of Chemotrophic Metabolisms in Deep-Dwelling Chloroflexi Conferred by Ancient Horizontal Gene Transfer Events

Science.gov (United States)

Momper, L. M.; Magnabosco, C.; Amend, J.; Osburn, M. R.; Fournier, G. P.

2017-12-01

The marine and terrestrial subsurface biospheres represent quite likely the largest reservoirs for life on Earth, directly impacting surface processes and global cycles throughout Earth's history. In the deep subsurface biosphere (DSB) organic carbon and energy are often extremely scarce. However, archaea and bacteria are able to persist in the DSB to at least 3.5 km below surface [1]. Understanding how they persist, and by what metabolisms they subsist, are key questions in this biosphere. To address these questions we investigated 5 global DSB environments: one legacy mine in South Dakota, USA, 3 mines in South Africa and marine fluids circulating beneath the Juan de Fuca Ridge. Boreholes within these mines provided access to fluids buried beneath the earth's surface and sampled depths down to 3.1 km. Geochemical data were collected concomitantly with DNA for metagenomic sequencing. We examined genomes of the ancient and deeply branching Chloroflexi for metabolic capabilities and interrogated the geochemical drivers behind those metabolisms with in situ thermodynamic modeling of reaction energetics. In total, 23 Chloroflexi genomes were identified and analyzed from the 5 subsurface sites. Genes for nitrate reduction (nar) and sulfite reduction (dsr) were found in many of the South Africa Chloroflexi but were absent from genomes collected in South Dakota. Indeed, nitrate reduction was among the most energetically favorable reactions in South African fluids (10-14 kJ cell-1 sec -1 per mol of reactant) and sulfur reduction with Fe2+ or H2 was also exergonic [2]. Conversely, genes for nitrite and nitrous oxide reduction (nrf, nir and nos) were found in genomes collected in South Dakota and Juan de Fuca, but not South Africa. We examined the origin of genes conferring these metabolisms in the Chloroflexi genomes. We discovered evidence for horizontal gene transfer (HGT) for all of these putative metabolisms. Retention of these genes in Chloroflexi lineages indicates

Interaction between Hydrosphere and Biosphere: Challenges and Opportunities

Science.gov (United States)

Kumar, P.; Sivapalan, M.

2007-12-01

Vegetated terrestrial ecosystems and the overlying atmosphere are dynamically linked though the continuous transfer of mass, energy and momentum. The hydrologic variability interacts with the vegetation at time scales ranging from hours to days to inter-annual and decadal. The existing distribution of ecosystems is a result of evolutionary selections in response to environmental constraints which are themselves modified as terrestrial systems evolve until reaching a dynamic equilibrium. However this balance is changing, often rapidly, in response to anthropogenic influences such as climate change, land use/land cover change, and urban and agricultural expansions. Evidence suggests that vegetation response is adaptive in that they alter their survival strategies in response to environmental change, for example, through development of deep rooting and using hydraulic redistribution to better utilize the available moisture in the deeper soil layers. Yet little is known on how this impacts the hydrologic cycle and its variability. Active and adaptive control of vegetation and atmospheric flow moves soil-moisture that is no longer constrained by watershed boundaries. How do the atmospheric and terrestrial moisture, and vegetation interact to produce the observed variability in the water cycle and how does/will this variability change in response to the anthropogenic influences? What are the ecological consequences of this change? These broad questions lie at the heart of understanding the interaction between the hydrosphere and biosphere. Some specific questions to address are: · How does biosphere mediate the interaction between long time scale sub-surface hydrology and short time scale atmospheric hydrologic cycle? · How has this interaction given rise to the observed self-organized patterns of ecosystems and how do these ecosystems sustain the hydrologic regime needed for their own sustenance? · How are the dynamic regimes of ecohydrologic interactions affected by

Biosphere assessment for high-level radioactive waste disposal: modelling experiences and discussion on key parameters by sensitivity analysis in JNC

International Nuclear Information System (INIS)

Kato, Tomoko; Makino, Hitoshi; Uchida, Masahiro; Suzuki, Yuji

2004-01-01

In the safety assessment of the deep geological disposal system of the high-level radioactive waste (HLW), biosphere assessment is often necessary to estimate future radiological impacts on human beings (e.g. radiation dose). In order to estimate the dose, the surface environment (biosphere) into which future releases of radionuclides might occur and the associated future human behaviour needs to be considered. However, for a deep repository, such releases might not occur for many thousands of years after disposal. Over such timescales, it is impossible to predict with any certainty how the biosphere and human behaviour will evolve. To avoid endless speculation aimed at reducing such uncertainty, the 'Reference Biospheres' concept has been developed for use in the safety assessment of HLW disposal. As the aim of the safety assessment with a hypothetical HLW disposal system by JNC was to demonstrate the technical feasibility and reliability of the Japanese disposal concept for a range of geological and surface environments, some biosphere models were developed using the 'Reference Biospheres' concept and the BIOMASS Methodology. These models have been used to derive factors to convert the radionuclide flux from a geosphere to a biosphere into a dose (flux to dose conversion factors). Moreover, sensitivity analysis for parameters in the biosphere models was performed to evaluate and understand the relative importance of parameters. It was concluded that transport parameters in the surface environments, annual amount of food consumption, distribution coefficients on soils and sediments, transfer coefficients of radionuclides to animal products and concentration ratios for marine organisms would have larger influence on the flux to dose conversion factors than any other parameters. (author)

Implications of environmental change for biosphere modelling: work for UK Nirex Ltd

International Nuclear Information System (INIS)

Thorne, M.C.

1990-01-01

Over the timescales of interest in deep geological disposal of radioactive wastes, climate is expected to change radically, with glacial/interglacial cycling anticipated. Climatic conditions and climate change have a influence on the characteristics of the biosphere into which the radionuclides emerge and on the doses to man which may occur. The various factors involved have been taken into account in assessment studies undertaken by the Nirex Disposal Safety Assessment Team. Results from these studies illustrate the major importance of dispersion processes in the biosphere in determining individual radiation doses, and the importance of using self-consistent patterns of human behaviour appropriate to the environment under consideration. 5 refs., 1 tab

Subsurface Science Program Bibliography, 1985--1992

International Nuclear Information System (INIS)

1992-08-01

The Subsurface Science Program sponsors long-term basic research on (1) the fundamental physical, chemical, and biological mechanisms that control the reactivity, mobilization, stability, and transport of chemical mixtures in subsoils and ground water; (2) hydrogeology, including the hydraulic, microbiological, and geochemical properties of the vadose and saturated zones that control contaminant mobility and stability, including predictive modeling of coupled hydraulic-geochemical-microbial processes; and (3) the microbiology of deep sediments and ground water. TWs research, focused as it is on the natural subsurface environments that are most significantly affected by the more than 40 years of waste generation and disposal at DOE sites, is making important contributions to cleanup of DOE sites. Past DOE waste-disposal practices have resulted in subsurface contamination at DOE sites by unique combinations of radioactive materials and organic and inorganic chemicals (including heavy metals), which make site cleanup particularly difficult. The long- term (10- to 30-year) goal of the Subsurface Science Program is to provide a foundation of fundamental knowledge that can be used to reduce environmental risks and to provide a sound scientific basis for cost-effective cleanup strategies. The Subsurface Science Program is organized into nine interdisciplinary subprograms, or areas of basic research emphasis. The subprograms currently cover the areas of Co-Contaminant Chemistry, Colloids/Biocolloids, Multiphase Fluid Flow, Biodegradation/ Microbial Physiology, Deep Microbiology, Coupled Processes, Field-Scale (Natural Heterogeneity and Scale), and Environmental Science Research Center

Analysis specifications for the CC3 biosphere model BIOTRAC

International Nuclear Information System (INIS)

Szekely, J.G.; Wojciechowski, L.C.; Stephens, M.E.; Halliday, H.A.

1994-12-01

AECL Research is assessing a concept for disposing of Canada's nuclear fuel waste in a vault deep in plutonic rock of the Canadian Shield. A computer program called the Systems Variability Analysis Code (SYVAC) has been developed as an analytical tool for the postclosure (long-term) assessment of the concept. SYVAC3, the third generation of the code, is an executive program that directs repeated simulation of the disposal system to take into account parameter variation. For the postclosure assessment, the system model, CC3 (Canadian Concept, generation 3), was developed to describe a hypothetical disposal system that includes a disposal vault, the local geosphere and the biosphere in the vicinity of any discharge zones. BIOTRAC (BIOsphere TRansport And Consequences) is the biosphere model in the CC3 system model. The specifications for BIOTRAC, which were developed over a period of seven years, were subjected to numerous walkthrough examinations by the Biosphere Model Working Group to ensure that the intent of the model developers would be correctly specified for transformation into FORTRAN code. The FORTRAN version of BIOTRAC was written from interim versions of these specifications. Improvements to the code are based on revised versions of these specifications. The specifications consist of a data dictionary; sets of synopses, data flow diagrams and mini specs for the component models of BIOTRAC (surface water, soil, atmosphere, and food chain and dose); and supporting calculations (interface to the geosphere, consequences, and mass balance). (author). 20 refs., tabs., figs

Biosphere Model Report, Errata 1

Energy Technology Data Exchange (ETDEWEB)

M. Wasolek

2003-09-18

The purpose of this report is to document the biosphere model, the Environmental Radiation Model for Yucca Mountain, Nevada (ERMYN), which describes radionuclide transport processes in the biosphere and associated human exposure that may arise as the result of radionuclide release from the geologic repository at Yucca Mountain. The biosphere model is one of the process models that support the Yucca Mountain Project (YMP) Total System Performance Assessment (TSPA) for the license application (LA), the TSPA-LA. The ERMYN model provides the capability of performing human radiation dose assessments. This report documents the biosphere model, which includes: (1) Describing the reference biosphere, human receptor, exposure scenarios, and primary radionuclides for each exposure scenario (Section 6.1); (2) Developing a biosphere conceptual model using site-specific features, events, and processes (FEPs), the reference biosphere, the human receptor, and assumptions (Section 6.2 and Section 6.3); (3) Building a mathematical model using the biosphere conceptual model and published biosphere models (Sections 6.4 and 6.5); (4) Summarizing input parameters for the mathematical model, including the uncertainty associated with input values (Section 6.6); (5) Identifying improvements in the ERMYN model compared with the model used in previous biosphere modeling (Section 6.7); (6) Constructing an ERMYN implementation tool (model) based on the biosphere mathematical model using GoldSim stochastic simulation software (Sections 6.8 and 6.9); (7) Verifying the ERMYN model by comparing output from the software with hand calculations to ensure that the GoldSim implementation is correct (Section 6.10); (8) Validating the ERMYN model by corroborating it with published biosphere models; comparing conceptual models, mathematical models, and numerical results (Section 7).

Biosphere Model Report, Errata 1

International Nuclear Information System (INIS)

Wasolek, M.

2003-01-01

The purpose of this report is to document the biosphere model, the Environmental Radiation Model for Yucca Mountain, Nevada (ERMYN), which describes radionuclide transport processes in the biosphere and associated human exposure that may arise as the result of radionuclide release from the geologic repository at Yucca Mountain. The biosphere model is one of the process models that support the Yucca Mountain Project (YMP) Total System Performance Assessment (TSPA) for the license application (LA), the TSPA-LA. The ERMYN model provides the capability of performing human radiation dose assessments. This report documents the biosphere model, which includes: (1) Describing the reference biosphere, human receptor, exposure scenarios, and primary radionuclides for each exposure scenario (Section 6.1); (2) Developing a biosphere conceptual model using site-specific features, events, and processes (FEPs), the reference biosphere, the human receptor, and assumptions (Section 6.2 and Section 6.3); (3) Building a mathematical model using the biosphere conceptual model and published biosphere models (Sections 6.4 and 6.5); (4) Summarizing input parameters for the mathematical model, including the uncertainty associated with input values (Section 6.6); (5) Identifying improvements in the ERMYN model compared with the model used in previous biosphere modeling (Section 6.7); (6) Constructing an ERMYN implementation tool (model) based on the biosphere mathematical model using GoldSim stochastic simulation software (Sections 6.8 and 6.9); (7) Verifying the ERMYN model by comparing output from the software with hand calculations to ensure that the GoldSim implementation is correct (Section 6.10); (8) Validating the ERMYN model by corroborating it with published biosphere models; comparing conceptual models, mathematical models, and numerical results (Section 7)

Potential Physiologies of Deep Branches on the Tree of Life with Deep Subsurface Samples from IODP Leg 347: Baltic Sea Paleoenvironment

Science.gov (United States)

Lloyd, K. G.; Bird, J. T.; Shumaker, A.

2014-12-01

Very little is known about how evolutionary branches that are distantly related to cultured microorganisms make a living in the deep subsurface marine environment. Here, sediments are cut-off from surface inputs of organic substrates for tens of thousands of years; yet somehow support a diverse population of microorganisms. We examined the potential metabolic and ecological roles of uncultured archaea and bacteria in IODP Leg 347: Baltic Sea Paleoenvironment samples, using quantitative PCR holes 60B, 63E, 65C, and 59C and single cell genomic analysis for hole 60B. We quantified changes in total archaea and bacteria, as well as deeply-branching archaeal taxa with depth. These sediment cores alternate between high and low salinities, following a glacial cycle. This allows changes in the quantities of these groups to be placed in the context of potentially vastly different organic matter sources. In addition, single cells were isolated, and their genomes were amplified and sequenced to allow a deeper look into potential physiologies of uncultured deeply-branching organisms found up to 86 meters deep in marine sediments. Together, these data provide deeper insight into the relationship between microorganisms and their organic matter substrates in this extreme environments.

Interim report on reference biospheres for radioactive waste disposal

International Nuclear Information System (INIS)

Dorp, F. van

1994-10-01

Primary criteria for repository safety are commonly expressed in terms of risk or dose, and a biosphere model is required to evaluate the corresponding assessment endpoints. Even when other indicators are used to express the safety goals, a biosphere model is still needed in order to justify those indicators. In safety or performance assessments of a repository, the uncertainties in space and time for the different components of the repository system have to be considered. For the biosphere component, prediction of future human habits, in particular, is extremely uncertain. This is especially important in the assessment of deep geological disposal, which involves very long timescales, particularly for wastes containing very long lived radionuclides. Thus, the results of biosphere modelling should not be seen as predictions, but as illustrations of the consequences that may occur, should the postulated release occur today or under other conditions implied by the underlying biosphere model assumptions. Differences in biosphere modelling approaches arise because of differences in regulations, the nature of the wastes to be disposed of, disposal site characteristics, disposal concepts and purposes of the assessment. Differences in treatment of uncertainties can also arise. For example, if doses or risks are anticipated to be far below regulatory limits, assessments may be based upon simplified and, necessarily, conservative biosphere models. At present biosphere models used to assess radioactive waste disposal show significant differences in the features, events and processes (FEPs) included or excluded. In general, the reasons for these differences have not been well documented or explained. Developments in radioecology have implications for biosphere modelling for radioactive waste disposal. In particular, after the Chernobyl accident, radioecological research has been significantly increased. Results of this research are already having and will continue to have a

Models for dose assessments. Modules for various biosphere types

Energy Technology Data Exchange (ETDEWEB)

Bergstroem, U.; Nordlinder, S.; Aggeryd, I. [Studsvik Eco and Safety AB, Nykoeping (Sweden)

1999-12-01

The main objective of this study was to provide a basis for illustrations of yearly dose rates to the most exposed individual from hypothetical leakages of radionuclides from a deep bedrock repository for spent nuclear fuel and other radioactive waste. The results of this study will be used in the safety assessment SR 97 and in a study on the design and long-term safety for a repository planned to contain long-lived low and intermediate level waste. The repositories will be designed to isolate the radionuclides for several hundred thousands of years. In the SR 97 study, however, hypothetical scenarios for leakage are postulated. Radionuclides are hence assumed to be transported in the geosphere by groundwater, and probably discharge into the biosphere. This may occur in several types of ecosystems. A number of categories of such ecosystems were identified, and turnover of radionuclides was modelled separately for each ecosystem. Previous studies had focused on generic models for wells, lakes and coastal areas. These models were, in this study, developed further to use site-specific data. In addition, flows of groundwater, containing radionuclides, to agricultural land and peat bogs were considered. All these categories are referred to as modules in this report. The forest ecosystems were not included, due to a general lack of knowledge of biospheric processes in connection with discharge of groundwater in forested areas. Examples of each type of module were run with the assumption of a continuous annual release into the biosphere of 1 Bq for each radionuclide during 10 000 years. The results are presented as ecosystem specific dose conversion factors (EDFs) for each nuclide at the year 10 000, assuming stationary ecosystems and prevailing living conditions and habits. All calculations were performed with uncertainty analyses included. Simplifications and assumptions in the modelling of biospheric processes are discussed. The use of modules may be seen as a step

Models for dose assessments. Modules for various biosphere types

International Nuclear Information System (INIS)

Bergstroem, U.; Nordlinder, S.; Aggeryd, I.

1999-12-01

The main objective of this study was to provide a basis for illustrations of yearly dose rates to the most exposed individual from hypothetical leakages of radionuclides from a deep bedrock repository for spent nuclear fuel and other radioactive waste. The results of this study will be used in the safety assessment SR 97 and in a study on the design and long-term safety for a repository planned to contain long-lived low and intermediate level waste. The repositories will be designed to isolate the radionuclides for several hundred thousands of years. In the SR 97 study, however, hypothetical scenarios for leakage are postulated. Radionuclides are hence assumed to be transported in the geosphere by groundwater, and probably discharge into the biosphere. This may occur in several types of ecosystems. A number of categories of such ecosystems were identified, and turnover of radionuclides was modelled separately for each ecosystem. Previous studies had focused on generic models for wells, lakes and coastal areas. These models were, in this study, developed further to use site-specific data. In addition, flows of groundwater, containing radionuclides, to agricultural land and peat bogs were considered. All these categories are referred to as modules in this report. The forest ecosystems were not included, due to a general lack of knowledge of biospheric processes in connection with discharge of groundwater in forested areas. Examples of each type of module were run with the assumption of a continuous annual release into the biosphere of 1 Bq for each radionuclide during 10 000 years. The results are presented as ecosystem specific dose conversion factors (EDFs) for each nuclide at the year 10 000, assuming stationary ecosystems and prevailing living conditions and habits. All calculations were performed with uncertainty analyses included. Simplifications and assumptions in the modelling of biospheric processes are discussed. The use of modules may be seen as a step

The Legacy of Biosphere 2 for Biospherics and Closed Ecological System Research

Science.gov (United States)

Allen, J.; Alling, A.; Nelson, M.

The unprecedented challenges of creating Biosphere 2, the world's first laboratory for biospherics, the study of global ecology and long-term closed ecological system dynamics led to breakthrough developments in many fields, and a deeper understanding of the opportunities and difficulties of material closure. This paper will review these accomplishments and challenges, citing some of the key research accomplishments and publications which have resulted from the experiments in Biosphere 2. Engineering accomplishments included development of a technique for variable volume to deal with pressure differences between the facility and outside environment, developing methods of leak detection and sealing, and achieving new standards of closure, with an annual atmospheric leakrate of less than 10%, or less than 300 ppm per day. This degree of closure permitted detailed tracking of carbon dioxide, oxygen, and trace gases such as nitrous oxide and ethylene over the seasonal variability of two years. Full closure also necessitated developing new approaches and technologies for complete air, water, and wastewater recycle and reuse within the facility. The development of a soil-based highly productive agricultural system was a first in closed ecological systems, and much was learned about managing a wide variety of crops using non-chemical means of pest and disease control. Closed ecological systems have different temporal b ogeochemical cycling and ranges ofi atmospheric components because of their smaller reservoirs of air, water and soil, and higher concentration of biomass, and Biosphere 2 provided detailed examination and modeling of these accelerated cycles over a period of closure which measured in years. Medical research inside Biosphere 2 included the effects on humans of lowered oxygen: the discovery that human productivity can be maintained down to 15% oxygen could lead to major economies on the design of space stations and planetary/lunar settlements. The improved

Microbiology of transitional groundwater of the porous overburden and underlying fractured bedrock aquifers in Olkiluoto 2004, Finland

International Nuclear Information System (INIS)

Pedersen, K.

2006-07-01

The subsurface biosphere on Earth appears to be far more expansive and metabolically and phylogenetically complex than previously thought. A diverse suite of subsurface environments have been reported to support microbial ecosystems, extending from a few meters below the surface to several hundred meters. The discovery of a deep biosphere will have several important effects on underground repositories for radioactive wastes. The main potential effects of microorganisms in the context of a KBS-3 type repository for spent fuel in the bedrock of Olkiluoto are: Oxygen reduction and maintenance of anoxic and reduced conditions; Bio-immobilisation and bio-mobilisation of radionuclides, and the effects from microbial metabolism on radionuclide mobility; Sulphate reduction to sulphide and the potential for copper sulphide corrosion. The first main objective of this study was to characterize the geochemistry, biomass and microbial diversity of shallow subsurface groundwater at Olkiluoto, from 4.0 m down to 24.5 m. This objective also permitted the determination of whether or not there is any transition in the shallow depths at Olkiluoto to microbial conditions associated with the deep subsurface. The second main objective was to continue the study of biomass and microbial metabolic diversity in deep groundwater of Olkiluoto to a maximal depth of 525 m, using cultivation methods similar to those applied to the shallow groundwater. This was the first investigation that covered both shallow and deep groundwater microbiology. The analysis of microbiology is very important for proper understanding of the evolution of geochemical processes in and around the underground research facility ONKALO being constructed at Olkiluoto by Posiva since autumn 2004, as well as for the planned KBS-3 type spent fuel repository at Olkiluoto. There are several conclusions and hypotheses with respect to the microbiology that are of great importance for ONKALO and for the spent fuel repository. The

Antibiotic- and heavy-metal resistance in bacteria isolated from deep subsurface in El Callao region, Venezuela

Directory of Open Access Journals (Sweden)

Maura Lina Rojas Pirela

2014-07-01

Full Text Available Título en ingles: Antibiotic- and heavy-metal resistance in bacteria isolated from deep subsurface in El Callao region, Venezuela Título corto: Antibiotic and metal resistance in bacteria from deep subsurface Título en español: Resistencia a antibioticos y metals pesados en bacterias aisladas de subsuelo en la región El Callao, Venezuela Resumen:  Se investigó el efecto de la contaminación con mercurio (Hg en las comunidades bacterianas del subsuelo profundo en la región de El Callao (Estado Bolívar, Venezuela. Se estudiaron comunidades bacterianas de dos niveles de profundidad (-288 m y -388 m en una mina de oro con el propósito de describir las características más relevantes de las bacterias indígenas cultivables que colonizaban esta mina. Se evaluaron los patrones de resistencia a antibióticos y metales pesados, presencia del gen merA y plásmidos en aislados resistentes. Se encontró una elevada frecuencia de bacterias indígenas resistentes al Hg y otros metales pesados. De 76 aislados Hg-resistentes probados 73.7 % fueron adicionalmente resistentes a ampicilina; 86.8 % a cloranfenicol; 67.1 % a tetraciclina; 56.6 % a estreptomicina y 51.3 % a kanamicina. Además, se encontró que 40.74 % (-328 m y 26.53 % (-388 m de las bacterias Hg-resistentes fueron simultáneamente resistentes tanto a cuatro como a cinco de estos antibióticos. Se detectó la presencia de plásmidos de alto y bajo peso molecular y, a pesar de que los aislados mostraban resistencia a compuestos mercuriales, la presencia del gen merA fue detectada solo en 71.05 % de los cepas. Estos resultados sugieren que la exposición a Hg podría ser una presión selectiva en la proliferación de bacterias resistentes a antibióticos y promover el mantenimiento y propagación de estos genes de resistencia. Sin embargo, la existencia de tales resistencias a estas profundidades podría también apoyar la idea de que la resistencia a antibióticos en estas bacterias es

The legacy of Biosphere 2 for the study of biospherics and closed ecological systems.

Science.gov (United States)

Allen, J P; Nelson, M; Alling, A

2003-01-01

The unprecedented challenges of creating Biosphere 2, the world's first laboratory for biospherics, the study of global ecology and long-term closed ecological system dynamics, led to breakthrough developments in many fields, and a deeper understanding of the opportunities and difficulties of material closure. This paper will review accomplishments and challenges, citing some of the key research findings and publications that have resulted from the experiments in Biosphere 2. Engineering accomplishments included development of a technique for variable volume to deal with pressure differences between the facility and outside environment, developing methods of atmospheric leak detection and sealing, while achieving new standards of closure, with an annual atmospheric leakrate of less than 10%, or less than 300 ppm per day. This degree of closure permitted detailed tracking of carbon dioxide, oxygen, and trace gases such as nitrous oxide and ethylene over the seasonal variability of two years. Full closure also necessitated developing new approaches and technologies for complete air, water, and wastewater recycle and reuse within the facility. The development of a soil-based highly productive agricultural system was a first in closed ecological systems, and much was learned about managing a wide variety of crops using non-chemical means of pest and disease control. Closed ecological systems have different temporal biogeochemical cycling and ranges of atmospheric components because of their smaller reservoirs of air, water and soil, and higher concentration of biomass, and Biosphere 2 provided detailed examination and modeling of these accelerated cycles over a period of closure which measured in years. Medical research inside Biosphere 2 included the effects on humans of lowered oxygen: the discovery that human productivity can be maintained with good health with lowered atmospheric oxygen levels could lead to major economies on the design of space stations and

The legacy of biosphere 2 for the study of biospherics and closed ecological systems

Science.gov (United States)

Allen, J. P.; Nelson, M.; Alling, A.

The unprecedented challenges of creating Biosphere 2, the world's first laboratory for biospherics, the study of global ecology and long-term closed ecological system dynamics, led to breakthrough developments in many fields, and a deeper understanding of the opportunities and difficulties of material closure. This paper will review accomplishments and challenges, citing some of the key research findings and publications that have resulted from the experiments in Biosphere 2. Engineering accomplishments included development of a technique for variable volume to deal with pressure differences between the facility and outside environment, developing methods of atmospheric leak detection and sealing, while achieving new standards of closure, with an annual atmospheric leakrate of less than 10%, or less than 300 ppm per day. This degree of closure permitted detailed tracking of carbon dioxide, oxygen, and trice gases such as nitrous oxide and ethylene over the seasonal variability of two years. Full closure also necessitated developing new approaches and technologies for complete air, water, and wastewater recycle and reuse within the facility. The development of a soil-based highly productive agricultural system was a first in closed ecological systems, and much was learned about managing a wide variety of crops using non-chemical means of pest and disease control. Closed ecological systems have different temporal biogeochemical cycling and ranges of atmospheric components because of their smaller reservoirs of air, water and soil, and higher concentration of biomass, and Biosphere 2 provided detailed examination and modeling of these accelerated cycles over a period of closure which measured in years. Medical research inside Biosphere 2 included the effects on humans of lowered oxygen: the discovery that human productivity can be maintained with good health with lowered atmospheric oxygen levels could lead to major economies on the design of space stations and

Biosphere Process Model Report

Energy Technology Data Exchange (ETDEWEB)

J. Schmitt

2000-05-25

To evaluate the postclosure performance of a potential monitored geologic repository at Yucca Mountain, a Total System Performance Assessment (TSPA) will be conducted. Nine Process Model Reports (PMRs), including this document, are being developed to summarize the technical basis for each of the process models supporting the TSPA model. These reports cover the following areas: (1) Integrated Site Model; (2) Unsaturated Zone Flow and Transport; (3) Near Field Environment; (4) Engineered Barrier System Degradation, Flow, and Transport; (5) Waste Package Degradation; (6) Waste Form Degradation; (7) Saturated Zone Flow and Transport; (8) Biosphere; and (9) Disruptive Events. Analysis/Model Reports (AMRs) contain the more detailed technical information used to support TSPA and the PMRs. The AMRs consists of data, analyses, models, software, and supporting documentation that will be used to defend the applicability of each process model for evaluating the postclosure performance of the potential Yucca Mountain repository system. This documentation will ensure the traceability of information from its source through its ultimate use in the TSPA-Site Recommendation (SR) and in the National Environmental Policy Act (NEPA) analysis processes. The objective of the Biosphere PMR is to summarize (1) the development of the biosphere model, and (2) the Biosphere Dose Conversion Factors (BDCFs) developed for use in TSPA. The Biosphere PMR does not present or summarize estimates of potential radiation doses to human receptors. Dose calculations are performed as part of TSPA and will be presented in the TSPA documentation. The biosphere model is a component of the process to evaluate postclosure repository performance and regulatory compliance for a potential monitored geologic repository at Yucca Mountain, Nevada. The biosphere model describes those exposure pathways in the biosphere by which radionuclides released from a potential repository could reach a human receptor

Biosphere Process Model Report

International Nuclear Information System (INIS)

Schmitt, J.

2000-01-01

To evaluate the postclosure performance of a potential monitored geologic repository at Yucca Mountain, a Total System Performance Assessment (TSPA) will be conducted. Nine Process Model Reports (PMRs), including this document, are being developed to summarize the technical basis for each of the process models supporting the TSPA model. These reports cover the following areas: (1) Integrated Site Model; (2) Unsaturated Zone Flow and Transport; (3) Near Field Environment; (4) Engineered Barrier System Degradation, Flow, and Transport; (5) Waste Package Degradation; (6) Waste Form Degradation; (7) Saturated Zone Flow and Transport; (8) Biosphere; and (9) Disruptive Events. Analysis/Model Reports (AMRs) contain the more detailed technical information used to support TSPA and the PMRs. The AMRs consists of data, analyses, models, software, and supporting documentation that will be used to defend the applicability of each process model for evaluating the postclosure performance of the potential Yucca Mountain repository system. This documentation will ensure the traceability of information from its source through its ultimate use in the TSPA-Site Recommendation (SR) and in the National Environmental Policy Act (NEPA) analysis processes. The objective of the Biosphere PMR is to summarize (1) the development of the biosphere model, and (2) the Biosphere Dose Conversion Factors (BDCFs) developed for use in TSPA. The Biosphere PMR does not present or summarize estimates of potential radiation doses to human receptors. Dose calculations are performed as part of TSPA and will be presented in the TSPA documentation. The biosphere model is a component of the process to evaluate postclosure repository performance and regulatory compliance for a potential monitored geologic repository at Yucca Mountain, Nevada. The biosphere model describes those exposure pathways in the biosphere by which radionuclides released from a potential repository could reach a human receptor

Use of Groundwater Lifetime Expectancy for the Performance Assessment of Deep Geologic Radioactive Waste Repositories.

Science.gov (United States)

Cornaton, F.; Park, Y.; Normani, S.; Sudicky, E.; Sykes, J.

2005-12-01

Long-term solutions for the disposal of toxic wastes usually involve isolation of the wastes in a deep subsurface geologic environment. In the case of spent nuclear fuel, the safety of the host repository depends on two main barriers: the engineered barrier and the natural geological barrier. If radionuclide leakage occurs from the engineered barrier, the geological medium represents the ultimate barrier that is relied upon to ensure safety. Consequently, an evaluation of radionuclide travel times from the repository to the biosphere is critically important in a performance assessment analysis. In this study, we develop a travel time framework based on the concept of groundwater lifetime expectancy as a safety indicator. Lifetime expectancy characterizes the time radionuclides will spend in the subsurface after their release from the repository and prior to discharging into the biosphere. The probability density function of lifetime expectancy is computed throughout the host rock by solving the backward-in-time solute transport equation subject to a properly posed set of boundary conditions. It can then be used to define optimal repository locations. In a second step, the risk associated with selected sites can be evaluated by simulating an appropriate contaminant release history. The proposed methodology is applied in the context of a typical Canadian Shield environment. Based on a statistically-generated three-dimension network of fracture zones embedded in the granitic host rock, the sensitivity and the uncertainty of lifetime expectancy to the hydraulic and dispersive properties of the fracture network, including the impact of conditioning via their surface expressions, is computed in order to demonstrate the utility of the methodology.

Site and Regional Data for Biosphere Assessment BSA-2009 Supplement to Olkiluoto Biosphere Description 2009

International Nuclear Information System (INIS)

Aro, L.; Haapanen, R.; Puhakka, L.; Hjerpe, T.; Kirkkala, T.; Koivunen, S.; Lahdenperae, A.-M.; Salo, T.; Ikonen, A.T.K.; Helin, J.

2010-06-01

The safety case for a spent nuclear fuel repository at Olkiluoto includes a computational safety assessment. A site-specific biosphere assessment is an integral part of them both. In 2009 an assessment was conducted to demonstrate preparedness to apply for construction license to the repository in 2012. As a part of the biosphere assessment, the present conditions at the site are described in Olkiluoto biosphere description report for an analogue of the future conditions being simulated in the safety assessment. This report is a supplement to the biosphere description report of 2009 and documents the site and regional data used in the biosphere assessment 'BSA-2009' with respective rationales. (orig.)

Biosphere reserves: Attributes for success.

Science.gov (United States)

Van Cuong, Chu; Dart, Peter; Hockings, Marc

2017-03-01

Biosphere reserves established under the UNESCO Man and the Biosphere Program aim to harmonise biodiversity conservation and sustainable development. Concerns over the extent to which the reserve network was living up to this ideal led to the development of a new strategy in 1995 (the Seville Strategy) to enhance the operation of the network of reserves. An evaluation of effectiveness of management of the biosphere reserve network was called for as part of this strategy. Expert opinion was assembled through a Delphi Process to identify successful and less successful reserves and investigate common factors influencing success or failure. Ninety biosphere reserves including sixty successful and thirty less successful reserves in 42 countries across all five Man and the Biosphere Program regions were identified. Most successful sites are the post-Seville generation while the majority of unsuccessful sites are pre-Seville that are managed as national parks and have not been amended to conform to the characteristics that are meant to define a biosphere reserve. Stakeholder participation and collaboration, governance, finance and resources, management, and awareness and communication are the most influential factors in the success or failure of the biosphere reserves. For success, the biosphere reserve concept needs to be clearly understood and applied through landscape zoning. Designated reserves then need a management system with inclusive good governance, strong participation and collaboration, adequate finance and human resource allocation and stable and responsible management and implementation. All rather obvious but it is difficult to achieve without commitment to the biosphere reserve concept by the governance authorities. Copyright © 2016 Elsevier Ltd. All rights reserved.

Deep subsurface life from North Pond: enrichment, isolation, characterization and genomes of heterotrophic bacteria

Directory of Open Access Journals (Sweden)

Joseph A. Russell

2016-05-01

Full Text Available Studies of subsurface microorganisms have yielded few environmentally relevant isolates for laboratory studies. In order to address this lack of cultivated microorganisms, we initiated several enrichments on sediment and underlying basalt samples from North Pond, a sediment basin ringed by basalt outcrops underlying an oligotrophic water-column west of the Mid-Atlantic Ridge at 22°N. In contrast to anoxic enrichments, growth was observed in aerobic, heterotrophic enrichments from sediment of IODP site U1382B at 4 and 68 meters below seafloor (mbsf. These sediment depths, respectively, correspond to the fringes of oxygen penetration from overlying seawater in the top of the sediment column and upward migration of oxygen from oxic seawater from the basalt aquifer below the sediment. Here we report the enrichment, isolation, and initial characterizations of three isolated aerobic heterotrophs from North Pond sediments; an Arthrobacter species from 4 mbsf, and Paracoccus and Pseudomonas species from 68 mbsf. These cultivated bacteria are represented in the amplicon 16S rRNA gene libraries created from whole sediments, albeit at low (up to 2% relative abundance. We provide genomic evidence from our isolates demonstrating that the Arthrobacter and Pseudomonas isolates have the potential to respire nitrate and oxygen, though dissimilatory nitrate reduction could not be confirmed in laboratory cultures. The cultures from this study represent members of environmentally significant phyla, and allow for further studies into geochemical factors impacting life in the deep subsurface.

Deep Subsurface Life from North Pond: Enrichment, Isolation, Characterization and Genomes of Heterotrophic Bacteria.

Science.gov (United States)

Russell, Joseph A; León-Zayas, Rosa; Wrighton, Kelly; Biddle, Jennifer F

2016-01-01

Studies of subsurface microorganisms have yielded few environmentally relevant isolates for laboratory studies. In order to address this lack of cultivated microorganisms, we initiated several enrichments on sediment and underlying basalt samples from North Pond, a sediment basin ringed by basalt outcrops underlying an oligotrophic water-column west of the Mid-Atlantic Ridge at 22°N. In contrast to anoxic enrichments, growth was observed in aerobic, heterotrophic enrichments from sediment of IODP Hole U1382B at 4 and 68 m below seafloor (mbsf). These sediment depths, respectively, correspond to the fringes of oxygen penetration from overlying seawater in the top of the sediment column and upward migration of oxygen from oxic seawater from the basalt aquifer below the sediment. Here we report the enrichment, isolation, initial characterization and genomes of three isolated aerobic heterotrophs from North Pond sediments; an Arthrobacter species from 4 mbsf, and Paracoccus and Pseudomonas species from 68 mbsf. These cultivated bacteria are represented in the amplicon 16S rRNA gene libraries created from whole sediments, albeit at low (up to 2%) relative abundance. We provide genomic evidence from our isolates demonstrating that the Arthrobacter and Pseudomonas isolates have the potential to respire nitrate and oxygen, though dissimilatory nitrate reduction could not be confirmed in laboratory cultures. The cultures from this study represent members of abundant phyla, as determined by amplicon sequencing of environmental DNA extracts, and allow for further studies into geochemical factors impacting life in the deep subsurface.

Isotopic evidence for the influence of typhoons and submarine canyons on the sourcing and transport behavior of biospheric organic carbon to the deep sea

Science.gov (United States)

Zheng, Li-Wei; Ding, Xiaodong; Liu, James T.; Li, Dawei; Lee, Tsung-Yu; Zheng, Xufeng; Zheng, Zhenzhen; Xu, Min Nina; Dai, Minhan; Kao, Shuh-Ji

2017-05-01

Export of biospheric organic carbon from land masses to the ocean plays an important role in regulating the global carbon cycle. High-relief islands in the western Pacific are hotspots for such land-to-ocean carbon transport due to frequent floods and active tectonics. Submarine canyon systems serve as a major conduit to convey terrestrial organics into the deep sea, particularly during episodic floods, though the nature of ephemeral sediment transportation through such canyons remains unclear. In this study, we deployed a sediment trap in southwestern Taiwan's Gaoping submarine canyon during summer 2008, during which Typhoon Kalmaegi impacted the study area. We investigated sources of particulate organic carbon and quantified the content of fossil organic carbon (OCf) and biospheric non-fossil carbon (OCnf) during typhoon and non-typhoon periods, based on relations between total organic carbon (TOC), isotopic composition (δ13 C, 14C), and nitrogen to carbon ratios (N/C) of newly and previously reported source materials. During typhoons, flooding connected terrestrial rivers to the submarine canyon. Fresh plant debris was not found in the trap except in the hyperpycnal layer, suggesting that only hyperpycnal flow is capable of entraining plant debris, while segregation had occurred during non-hyperpycnal periods. The OCnf components in typhoon flood and trapped samples were likely sourced from aged organics buried in ancient landslides. During non-typhoon periods, the canyon is more connected to the shelf, where waves and tides cause reworking, thus allowing abiotic and biotic processes to generate isotopically uniform and similarly aged OCnf for transport into the canyon. Therefore, extreme events coupled with the submarine canyon system created an efficient method for deep-sea burial of freshly produced organic-rich material. Our results shed light on the ephemeral transport of organics within a submarine canyon system on an active tectonic margin.

Modeling the impact of climate change in Germany with biosphere models for long-term safety assessment of nuclear waste repositories

International Nuclear Information System (INIS)

Staudt, C.; Semiochkina, N.; Kaiser, J.C.; Pröhl, G.

2013-01-01

Biosphere models are used to evaluate the exposure of populations to radionuclides from a deep geological repository. Since the time frame for assessments of long-time disposal safety is 1 million years, potential future climate changes need to be accounted for. Potential future climate conditions were defined for northern Germany according to model results from the BIOCLIM project. Nine present day reference climate regions were defined to cover those future climate conditions. A biosphere model was developed according to the BIOMASS methodology of the IAEA and model parameters were adjusted to the conditions at the reference climate regions. The model includes exposure pathways common to those reference climate regions in a stylized biosphere and relevant to the exposure of a hypothetical self-sustaining population at the site of potential radionuclide contamination from a deep geological repository. The end points of the model are Biosphere Dose Conversion factors (BDCF) for a range of radionuclides and scenarios normalized for a constant radionuclide concentration in near-surface groundwater. Model results suggest an increased exposure of in dry climate regions with a high impact of drinking water consumption rates and the amount of irrigation water used for agriculture. - Highlights: ► We model Biosphere Dose Conversion Factors for a representative group exposed to radionuclides from a waste repository. ► The BDCF are modeled for different soil types. ► One model is used for the assessment of the influence of climate change during the disposal time frame.

Modeling the impact of climate change in Germany with biosphere models for long-term safety assessment of nuclear waste repositories.

Science.gov (United States)

Staudt, C; Semiochkina, N; Kaiser, J C; Pröhl, G

2013-01-01

Biosphere models are used to evaluate the exposure of populations to radionuclides from a deep geological repository. Since the time frame for assessments of long-time disposal safety is 1 million years, potential future climate changes need to be accounted for. Potential future climate conditions were defined for northern Germany according to model results from the BIOCLIM project. Nine present day reference climate regions were defined to cover those future climate conditions. A biosphere model was developed according to the BIOMASS methodology of the IAEA and model parameters were adjusted to the conditions at the reference climate regions. The model includes exposure pathways common to those reference climate regions in a stylized biosphere and relevant to the exposure of a hypothetical self-sustaining population at the site of potential radionuclide contamination from a deep geological repository. The end points of the model are Biosphere Dose Conversion factors (BDCF) for a range of radionuclides and scenarios normalized for a constant radionuclide concentration in near-surface groundwater. Model results suggest an increased exposure of in dry climate regions with a high impact of drinking water consumption rates and the amount of irrigation water used for agriculture. Copyright © 2012 Elsevier Ltd. All rights reserved.

A Search for Life in the Subsurface At Rio Tinto Spain, An Analog To Searching For Life On Mars.

Science.gov (United States)

Stoker, C. R.

2003-12-01

Most familiar life forms on Earth live in the surface biosphere where liquid water, sunlight, and the essential chemical elements for life are abundant. However, such environments are not found on Mars or anywhere else in the solar system. On Mars, the surface environmental conditions of pressure and temperature prevent formation of liquid water. Furthermore, conditions at the Martian surface are unfavorable to life due to intense ultraviolet radiation and strong oxidizing compounds that destroy organic compounds. However, subsurface liquid water on Mars has been predicted on theoretical grounds. The recent discovery of near surface ground ice by the Mars Odyssey mission, and the abundant evidence for recent Gully features observed by the Mars Global Surveyor mission strengthen the case for subsurface liquid water on Mars. Thus, the strategy for searching for life on Mars points to drilling to the depth of liquid water, bringing samples to the surface and analyzing them with instrumentation to detect in situ organisms and biomarker compounds. The MARTE (Mars Astrobiology Research and Technology Experiment) project is a field experiment focused on searching for a hypothesized subsurface anaerobic chemoautotrophic biosphere in the region of the Rio Tinto, a river in southwestern Spain while also demonstrating technology relevant to searching for a subsurface biosphere on Mars. The Tinto river is located in the Iberian Pyrite belt, one of the largest deposits of sulfide minerals in the world. The surface (river) system is an acidic extreme environment produced and maintained by microbes that metabolize sulfide minerals and produce sulfuric acid as a byproduct. Evidence suggests that the river is a surface manifestation of an underground biochemical reactor. Organisms found in the river are capable of chemoautotrophic metabolism using sulfide and ferric iron mineral substrates, suggesting these organisms could thrive in groundwater which is the source of the Rio Tinto

Radionuclide Geomicrobiology of the Deep Biosphere

DEFF Research Database (Denmark)

Anderson, Craig; Johnsson, Anna; Moll, Henry

2011-01-01

aerobic bacterial metabolism, microbial proliferation, biofilm development, and iron oxide formation. In these environments, the stalk-forming bacterium Gallionella may act as a scaffold for iron oxide precipitation on biological material. In situ work in the Aspo Hard Rock Laboratory tunnel indicated......This review summarizes research into interactions between microorganisms and radionuclides under conditions typical of a repository for high-level radioactive waste in deep hard rock environments at a depth of approximately 500 m. The cell-radionuclide interactions of strains of two bacterial...

Biosphere modelling for a deep radioactive waste repository: site-specific consideration of the groundwater-soil pathway

International Nuclear Information System (INIS)

Grogan, H.A.; Baeyens, B.; Mueller, H.; Dorp, F. van

1991-07-01

Scenario evaluations indicate that groundwater is the most probable pathway for released radionuclides to reach the biosphere from a deep underground nuclear waste repository. This report considers a small valley in northern Switzerland where the transport of groundwater to surface soil might be possible. The hydrological situation has been examined to allow a system of compartments and fluxes for modelling this pathway with respect to the release of radionuclides from an underground repository to be produced. Assuming present day conditions the best estimate surface soil concentrations are calculated by dividing the soil into two layers (deep soil, surface soil) and assuming an annual upward flux of 10 mm from the groundwater through the two soil layers. A constant unit activity concentration is assumed for the radionuclides in the groundwater. It is concluded that the resultant best estimate values must still be considered to be biased on the conservative side, in view of the fact that the more typical situation is likely to be that no groundwater reaches the surface soil. Upper and lower estimates for the surface soil radionuclide concentrations are based on the parameter perturbation results which were carried out for three key parameters, i.e. precipitation surplus, upward flux and solid-liquid distribution coefficients (K d ). It is noted that attention must be given to the functional relationships which exist between various model parameters. Upper estimates for the surface soil concentration are determined assuming a higher annual upward flux (100 mm) as well as a more conservative K d value compared with the base case. This gives rise to surface soil concentrations more than two orders of magnitude higher than the best estimate values. The lower estimated are more easily assigned assuming that no activity reaches the surface soil via this pathway. (author) 18 figs., 4 tabs., refs

Parametric study on the behavior of an innovative subsurface tension leg platform in ultra-deep water

Science.gov (United States)

Zhen, Xing-wei; Huang, Yi

2017-10-01

This study focuses on a new technology of Subsurface Tension Leg Platform (STLP), which utilizes the shallowwater rated well completion equipment and technology for the development of large oil and gas fields in ultra-deep water (UDW). Thus, the STLP concept offers attractive advantages over conventional field development concepts. STLP is basically a pre-installed Subsurface Sea-star Platform (SSP), which supports rigid risers and shallow-water rated well completion equipment. The paper details the results of the parametric study on the behavior of STLP at a water depth of 3000 m. At first, a general description of the STLP configuration and working principle is introduced. Then, the numerical models for the global analysis of the STLP in waves and current are presented. After that, extensive parametric studies are carried out with regarding to SSP/tethers system analysis, global dynamic analysis and riser interference analysis. Critical points are addressed on the mooring pattern and riser arrangement under the influence of ocean current, to ensure that the requirements on SSP stability and riser interference are well satisfied. Finally, conclusions and discussions are made. The results indicate that STLP is a competitive well and riser solution in up to 3000 m water depth for offshore petroleum production.

Understanding the subsurface thermal structure of deep sedimentary basins in Denmark - measurements and modelling results

DEFF Research Database (Denmark)

Balling, N.; Poulsen, Søren Erbs; Bording, Thue Sylvester

2015-01-01

Most of the Danish area is characterized by deep sedimentary basins with a great potential for exploitation of geothermal energy. Geothermal reservoirs are present at various depths and temperatures. Currently, three geothermal plants are operating producing warm water for district heating purposes...... of different conductivity. Mean geothermal gradients from surface to depths of 1000 to 3000 m are generally between 20 and 35 °C/km. The subsurface thermal structure is clearly dominated by conduction. Advection by groundwater migration is generally insignificant. Heat flow increases significantly with depth...... due to perturbation from long-term palaeoclimatic surface temperature variations. Examples of modelled temperature distribution for selected geothermal reservoir are shown. In the Gassum Formation, which is present in most of the Danish area, temperatures are largely between 35 and 90 °C for depths...

Structural control on the deep hydrogeological and geothermal aquifers related to the fractured Campanian-Miocene reservoirs of north-eastern Tunisia foreland constrained by subsurface data

Science.gov (United States)

Khomsi, Sami; Echihi, Oussema; Slimani, Naji

2012-03-01

A set of different data including high resolution seismic sections, petroleum wire-logging well data, borehole piezometry, structural cross-sections and outcrop analysis allowed us to characterise the tectonic framework, and its relationships with the deep aquifers seated in Cretaceous-Miocene deep reservoirs. The structural framework, based on major structures, controls the occurrence of deep aquifers and sub-basin aquifer distributions. Five structural domains can be defined, having different morphostructural characteristics. The northernmost domain lying on the north-south axis and Zaghouan thrust system is a domain of recharge by underflow of the different subsurface reservoirs and aquifers from outcrops of highly fractured reservoirs. On the other hand, the morphostructural configuration controls the piezometry of underground flows in the Plio-Quaternary unconfined aquifer. In the subsurface the Late Cretaceous-Miocene reservoirs are widespread with high thicknesses in many places and high porosities and connectivities especially along major fault corridors and on the crestal parts of major anticlines. Among all reservoirs, the Oligo-Miocene, detritic series are widespread and present high cumulative thicknesses. Subsurface and fieldwork outline the occurrence of 10 fractured sandy reservoirs for these series with packages having high hydrodynamic and petrophysical characteristics. These series show low salinities (maximum 5 g/l) in the northern part of the study area and will constitute an important source of drinkable water for the next generations. A regional structural cross-section is presented, compiled from all the different data sets, allowing us to define the major characteristics of the hydrogeological-hydrogeothermal sub-basins. Eight hydrogeological provinces are defined from north-west to south-east. A major thermal anomaly is clearly identified in the south-eastern part of the study area in Sfax-Sidi Il Itayem. This anomaly is possibly related to

Biogeography and ecology of the rare and abundant microbial lineages in deep-sea hydrothermal vents.

Science.gov (United States)

Anderson, Rika E; Sogin, Mitchell L; Baross, John A

2015-01-01

Environmental gradients generate countless ecological niches in deep-sea hydrothermal vent systems, which foster diverse microbial communities. The majority of distinct microbial lineages in these communities occur in very low abundance. However, the ecological role and distribution of rare and abundant lineages, particularly in deep, hot subsurface environments, remain unclear. Here, we use 16S rRNA tag sequencing to describe biogeographic patterning and microbial community structure of both rare and abundant archaea and bacteria in hydrothermal vent systems. We show that while rare archaeal lineages and almost all bacterial lineages displayed geographically restricted community structuring patterns, the abundant lineages of archaeal communities displayed a much more cosmopolitan distribution. Finally, analysis of one high-volume, high-temperature fluid sample representative of the deep hot biosphere described a unique microbial community that differed from microbial populations in diffuse flow fluid or sulfide samples, yet the rare thermophilic archaeal groups showed similarities to those that occur in sulfides. These results suggest that while most archaeal and bacterial lineages in vents are rare and display a highly regional distribution, a small percentage of lineages, particularly within the archaeal domain, are successful at widespread dispersal and colonization. © FEMS 2014. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

It's the Biosphere, Stupid!

OpenAIRE

Cairns, John

2007-01-01

The biosphere is humankind s life support system and the source of the resources that drive exponential growth. Without the biospheric life support system functioning in a way that is favorable to humans, humankind could face extinctions.

Using GNSS-R techniques to investigate the near sub-surface of Mars with the Deep Space Network

Science.gov (United States)

Elliott, H. M.; Bell, D. J.; Jin, C.; Decrossas, E.; Asmar, S.; Lazio, J.; Preston, R. A.; Ruf, C. S.; Renno, N. O.

2017-12-01

Global Navigation Satellite Systems Reflectometry (GNSS-R) has shown that passive measurements using separate active sources can infer the soil moisture, snow pack depth and other quantities of scientific interest. Here, we expand upon this method and propose that a passive measurement of the sub-surface dielectric profile of Mars can be made by using multipath interference between reflections off the surface and subsurface dielectric discontinuities. This measurement has the ability to reveal changes in the soil water content, the depth of a layer of sand, thickness of a layer of ice, and even identify centimeter-scale layering which may indicate the presence of a sedimentary bed. We have created a numerical ray tracing model to understand the potential of using multipath interference techniques to investigate the sub-surface dielectric properties and structure of Mars. We have further verified this model using layered beds of sand and concrete in laboratory experiments and then used the model to extrapolate how this technique may be applied to future Mars missions. We will present new results demonstrating how to characterize a multipath interference patterns as a function of frequency and/or incidence angle to measure the thickness of a dielectric layer of sand or ice. Our results demonstrate that dielectric discontinuities in the subsurface can be measured using this passive sensing technique and it could be used to effectively measure the thickness of a dielectric layer in the proximity of a landed spacecraft. In the case of an orbiter, we believe this technique would be effective at measuring the seasonal thickness of CO2 ice in the Polar Regions. This is exciting because our method can produce similar results to traditional ground penetrating radars without the need to have an active radar transmitter in-situ. Therefore, it is possible that future telecommunications systems can serve as both a radio and a scientific instrument when used in conjunction with

Biosphere II: engineering of manned, closed ecological systems.

Science.gov (United States)

Dempster, W F

1991-01-01

Space Biospheres and Ventures, a private, for-profit firm, has undertaken a major research and development project in the study of biospheres, with the objective of creating and producing biospheres. Biosphere II-scheduled for completion in March 1991-will be essentially isolated from the existing biosphere by a closed structure, composed of components derived from the existing biosphere. Like the biosphere of the Earth, Biosphere II will be essentially closed to exchanges of material or living organisms with the surrounding environment and open to energy and information exchanges. Also, like the biosphere of the Earth, Biosphere II will contain five kingdoms of life, a variety of ecosystems, plus humankind, culture, and technics. The system is designed to be complex, stable and evolving throughout its intended 100-year lifespan, rather than static. Biosphere II will cover approximately 1.3 hectare and contain 200,000 m3 in volume, with seven major biomes: tropical rainforest, tropical savannah, marsh, marine, desert, intensive agriculture, and human habitat. An interdisciplinary team of leading scientific, ecological, management, architectural, and engineering consultants have been contracted by Space Biospheres Ventures for the project. Potential applications for biospheric systems include scientific and ecological management research, refuges for endangered species, and life habitats for manned stations on spacecraft or other planets.

Earth's early biosphere

Science.gov (United States)

Des Marais, D. J.

1998-01-01

Understanding our own early biosphere is essential to our search for life elsewhere, because life arose on Earth very early and rocky planets shared similar early histories. The biosphere arose before 3.8 Ga ago, was exclusively unicellular and was dominated by hyperthermophiles that utilized chemical sources of energy and employed a range of metabolic pathways for CO2 assimilation. Photosynthesis also arose very early. Oxygenic photosynthesis arose later but still prior to 2.7 Ga. The transition toward the modern global environment was paced by a decline in volcanic and hydrothermal activity. These developments allowed atmospheric O2 levels to increase. The O2 increase created new niches for aerobic life, most notably the more advanced Eukarya that eventually spawned the megascopic fauna and flora of our modern biosphere.

Liquid Water in the Extremely Shallow Martian Subsurface

Science.gov (United States)

Pavlov, A.; Shivak, J. N.

2012-01-01

Availability of liquid water is one of the major constraints for the potential Martian biosphere. Although liquid water is unstable on the surface of Mars due to low atmospheric pressures, it has been suggested that liquid films of water could be present in the Martian soil. Here we explored a possibility of the liquid water formation in the extremely shallow (1-3 cm) subsurface layer under low atmospheric pressures (0.1-10 mbar) and low ("Martian") surface temperatures (approx.-50 C-0 C). We used a new Goddard Martian simulation chamber to demonstrate that even in the clean frozen soil with temperatures as low as -25C the amount of mobile water can reach several percents. We also showed that during brief periods of simulated daylight warming the shallow subsurface ice sublimates, the water vapor diffuses through porous surface layer of soil temporarily producing supersaturated conditions in the soil, which leads to the formation of additional liquid water. Our results suggest that despite cold temperatures and low atmospheric pressures, Martian soil just several cm below the surface can be habitable.

Physiologically anaerobic microorganisms of the deep subsurface

Energy Technology Data Exchange (ETDEWEB)

Stevens, S.E. Jr.; Chung, K.T.

1991-06-01

This study seeks to determine numbers, diversity, and morphology of anaerobic microorganisms in 15 samples of subsurface material from the Idaho National Engineering Laboratory, in 18 samples from the Hanford Reservation and in 1 rock sample from the Nevada Test Site; set up long term experiments on the chemical activities of anaerobic microorganisms based on these same samples; work to improve methods for the micro-scale determination of in situ anaerobic microbial activity;and to begin to isolate anaerobes from these samples into axenic culture with identification of the axenic isolates.

Anthropogenic transformation of the terrestrial biosphere.

Science.gov (United States)

Ellis, Erle C

2011-03-13

Human populations and their use of land have transformed most of the terrestrial biosphere into anthropogenic biomes (anthromes), causing a variety of novel ecological patterns and processes to emerge. To assess whether human populations and their use of land have directly altered the terrestrial biosphere sufficiently to indicate that the Earth system has entered a new geological epoch, spatially explicit global estimates of human populations and their use of land were analysed across the Holocene for their potential to induce irreversible novel transformation of the terrestrial biosphere. Human alteration of the terrestrial biosphere has been significant for more than 8000 years. However, only in the past century has the majority of the terrestrial biosphere been transformed into intensively used anthromes with predominantly novel anthropogenic ecological processes. At present, even were human populations to decline substantially or use of land become far more efficient, the current global extent, duration, type and intensity of human transformation of ecosystems have already irreversibly altered the terrestrial biosphere at levels sufficient to leave an unambiguous geological record differing substantially from that of the Holocene or any prior epoch. It remains to be seen whether the anthropogenic biosphere will be sustained and continue to evolve.

Relevance of deep-subsurface microbiology for underground gas storage and geothermal energy production.

Science.gov (United States)

Gniese, Claudia; Bombach, Petra; Rakoczy, Jana; Hoth, Nils; Schlömann, Michael; Richnow, Hans-Hermann; Krüger, Martin

2014-01-01

This chapter gives the reader an introduction into the microbiology of deep geological systems with a special focus on potential geobiotechnological applications and respective risk assessments. It has been known for decades that microbial activity is responsible for the degradation or conversion of hydrocarbons in oil, gas, and coal reservoirs. These processes occur in the absence of oxygen, a typical characteristic of such deep ecosystems. The understanding of the responsible microbial processes and their environmental regulation is not only of great scientific interest. It also has substantial economic and social relevance, inasmuch as these processes directly or indirectly affect the quantity and quality of the stored oil or gas. As outlined in the following chapter, in addition to the conventional hydrocarbons, new interest in such deep subsurface systems is rising for different technological developments. These are introduced together with related geomicrobiological topics. The capture and long-termed storage of large amounts of carbon dioxide, carbon capture and storage (CCS), for example, in depleted oil and gas reservoirs, is considered to be an important options to mitigate greenhouse gas emissions and global warming. On the other hand, the increasing contribution of energy from natural and renewable sources, such as wind, solar, geothermal energy, or biogas production leads to an increasing interest in underground storage of renewable energies. Energy carriers, that is, biogas, methane, or hydrogen, are often produced in a nonconstant manner and renewable energy may be produced at some distance from the place where it is needed. Therefore, storing the energy after its conversion to methane or hydrogen in porous reservoirs or salt caverns is extensively discussed. All these developments create new research fields and challenges for microbiologists and geobiotechnologists. As a basis for respective future work, we introduce the three major topics, that is

The Biosphere International Peer Review

International Nuclear Information System (INIS)

Van Luik, Abraham

2002-01-01

Abe van Luik (US DOE- YM, USA), ended the presentation by giving feedback from the IAEA peer review on the biosphere modelling strategy developed by the DOE Yucca Mountain Site Characterisation Office (YMSCO). This review was based on available international standards and guidance. The peer review team was constituted of both experts from regulatory and waste management organisations and national advisory committees. The implementation of the review consisted of an examination of biosphere reports mainly regarding the modelling and question and answer exchanges. The final report was submitted in April 2000. It contained twenty-three recommendations within two broad classifications; one concerning the regulatory framework, the other one regarding the framework to increase stakeholders' confidence in modelling. The three main categories of recommendations were outlined, namely (i) the DOE' s Biosphere assessment Approach, (ii) the definition of the biosphere system, and (iii) the model development, data and results. Regarding in particular the treatment of the uncertainties in the biosphere, it was viewed as a key issue during the review and thus it will be re-evaluated in the future performance assessment. The summary highlighted most of the recommendations received are to be acted on, and are to be included in the License Application plan for biosphere modelling

Biosphere modeling for HLW disposal in Japan

International Nuclear Information System (INIS)

Naito, Morimasa

2001-01-01

Concept of Reference Biosphere is defined by 'the set of assumptions and hypotheses that is necessary to provide a consistent basis for calculations of the radiological impact arising from long-term releases of repository-derived radionuclides into the biosphere'. Geological environment and biosphere interface (GBI) is the place having the high probability of introduction of radioactive nuclides to biosphere by groundwater. Reference biosphere methodology, GBI, basic models, assessment context, assumptions concerning the surface environment for the biosphere assessment, nuclides migration process, interaction matrix showing radionuclide transport pathways for biosphere modeling, conceptual model for exposure modes and pathways for each exposure group in the biosphere assessment are explained. Response of the biosphere assessment model is steady, unit flux input (1 Bq/y) of different nuclides (farming exposure group). The dose per unit input of agriculture group is 1 to 3 figures larger than that of other two fisheries groups in the case of river and coastal environment except Po-210. We can calculate easily the dose by determining the dose conversion factors derived from different GBI models. Comparison of flux to dose conversion factors derived from different GBI models is effective to know the properties of each model, process and importance of data. (S.Y.)

Fluid mixing and the deep biosphere of a fossil Lost City-type hydrothermal system at the Iberia Margin.

Science.gov (United States)

Klein, Frieder; Humphris, Susan E; Guo, Weifu; Schubotz, Florence; Schwarzenbach, Esther M; Orsi, William D

2015-09-29

Subseafloor mixing of reduced hydrothermal fluids with seawater is believed to provide the energy and substrates needed to support deep chemolithoautotrophic life in the hydrated oceanic mantle (i.e., serpentinite). However, geosphere-biosphere interactions in serpentinite-hosted subseafloor mixing zones remain poorly constrained. Here we examine fossil microbial communities and fluid mixing processes in the subseafloor of a Cretaceous Lost City-type hydrothermal system at the magma-poor passive Iberia Margin (Ocean Drilling Program Leg 149, Hole 897D). Brucite-calcite mineral assemblages precipitated from mixed fluids ca. 65 m below the Cretaceous paleo-seafloor at temperatures of 31.7 ± 4.3 °C within steep chemical gradients between weathered, carbonate-rich serpentinite breccia and serpentinite. Mixing of oxidized seawater and strongly reducing hydrothermal fluid at moderate temperatures created conditions capable of supporting microbial activity. Dense microbial colonies are fossilized in brucite-calcite veins that are strongly enriched in organic carbon (up to 0.5 wt.% of the total carbon) but depleted in (13)C (δ(13)C(TOC) = -19.4‰). We detected a combination of bacterial diether lipid biomarkers, archaeol, and archaeal tetraethers analogous to those found in carbonate chimneys at the active Lost City hydrothermal field. The exposure of mantle rocks to seawater during the breakup of Pangaea fueled chemolithoautotrophic microbial communities at the Iberia Margin, possibly before the onset of seafloor spreading. Lost City-type serpentinization systems have been discovered at midocean ridges, in forearc settings of subduction zones, and at continental margins. It appears that, wherever they occur, they can support microbial life, even in deep subseafloor environments.

"Biospheric medicine" as viewed from the two-year first closure of Biosphere 2.

Science.gov (United States)

Walford, R L; Bechtel, R; MacCallum, T; Paglia, D E; Weber, L J

1996-07-01

Biosphere 2 is a 3.15-acre, 7-million ft. enclosed ecological space near Tucson, AZ. It contains five wilderness and two domestic biomes (rain forest, savanna, desert, ocean, marsh; agricultural station, living quarters), an original introduction of 3,800 species (approximately 20% extinctions have occurred), and a large basement "technosphere." Sealed inside Biosphere 2 in September 1991, four women and four men, including two of the authors, maintained themselves and the various systems for 2 yr, the longest-sustained "isolated confined environment" period on record. MMPI psychological profile scores for Biosphere 2 crewmembers correlated closely with those reported for astronauts and shuttle applicants. Major medical problems encountered during the 2 yr included adaptation to a low-calorie (1800-2200 kcal.d-1 per person) but otherwise nutritionally adequate diet, with substantial weight loss (18% for men, 10% for women), and a declining oxygen atmosphere (down to 14.2%). Life in a miniworld such as Biosphere 2 may differ substantially from life in a space station or temporary planetary base. These differences include multiple, shifting, sometimes opposing post-launch objectives; complete self-sustenance with recycling of virtually all materials within a highly complex biologic system; retooling of some areas of practical medicine; an attention to "culture" as a social dynamic and how that may influence crew and leadership selection in a societal rather than a quasi-military community. Assuming that long-term planetary colonies must be largely self-sustaining (due to costs of supply over great distances), they must of necessity approach the condition of biospheres. Subject to chaos dynamic (nonlinear dynamic) perturbations, the behavior of complex biospheres will be inherently non-predictable--as opposed to the linear dynamic situation of most space missions--and will require of the inhabitants, including the medical team, a wide range of coping abilities. Under

Microbiology of transitional groundwater of the porous overburden and underlying shallow fractured bedrock aquifers in Olkiluoto, Finland. October 2005 - January 2006

International Nuclear Information System (INIS)

Pedersen, K.

2007-05-01

The subsurface biosphere on Earth appears to be far more expansive and metabolically and phylogenetically complex than previously thought. A diverse suite of subsurface environments has been reported to support microbial ecosystems, extending from a few meters below the surface to several thousand meters. The discovery of a deep biosphere will have several important implications for underground repositories for radioactive wastes. The main potential effects of microorganisms in the context of a KBS-3 type repository for spent fuel in the bedrock of Olkiluoto are: (1) Oxygen reduction and maintenance of anoxic and reduced conditions. (2) Bio-immobilisation and bio-mobilisation of radionuclides, and the effects from microbial metabolism on radionuclide mobility. (3) Sulphate reduction to sulphide and the risk for copper sulphide corrosion. The main objective of this study was to characterize the geochemistry, biomass and microbial diversity of shallow subsurface groundwater at Olkiluoto, from 4.0 m down to 14.9 m. This objective also permitted the determination of whether or not there is any transition in the shallow depths at Olkiluoto to microbial conditions associated with the deep subsurface. This was the second investigation that covered both shallow and some moderately deep groundwater microbiology in Olkiluoto. The analysis of microbiology is very important for proper understanding of the evolution of geochemical processes in and around the underground research facility ONKALO being constructed at Olkiluoto by Posiva since autumn 2004, as well as for the planned KBS-3 type spent fuel repository at Olkiluoto. There are several conclusions from this investigation that are of importance for ONKALO. The following present day conclusions can be drawn. Continued investigations will update and test them: The shallow biosphere was dominated by oxygen consuming microorganisms that block oxygen migration to deeper groundwater. This effect was most pronounced during the

Biosphere2 and Earthbuzz

Science.gov (United States)

Washburne, J. C.

2009-12-01

In an attempt to reach a broader audience, Biosphere 2, near Tucson, AZ, is participating in a network of science centers thanks to new funding through the Science Museum of Minnesota (SMM) and the National Center for Earth System Dynamics (NCED). Each of these centers will be tied together through an Earthbuzz kiosk, basically a networked web site that allows visitors to learn more about the work of leading local scientists in a very personal and captivating format. Content is currently being developed by Biosphere 2 researchers, staff, and graduate students that range from a public question and answer forum called “Scientist on the Spot” to science blogs by Biosphere 2 Fellows. It is hoped that this project will help educate the public about the Anthropocene, that is, the current geologic period that is so greatly affected by humankind’s impact on the health of the planet. Biosphere 2 provides a unique location to engage the public in this conversation for several reasons. First, no other destination on Earth gives the public such a physical immersion into what climate change might mean as does Biosphere 2. On the regular walking tour, visitors are guided through scaled down versions of an African savannah, a semi-arid thorn scrub, a coastal fog desert and a tropical rainforest. Digital displays of temperature and humidity confirm what your body is feeling - conditions ranging from desert aridity to tropical humidity. As one passes through the biomes of Biosphere 2, climate change is a whole body experience. Second, Biosphere 2 is also an active ecological research site - part of a unique network of sites run by the University of Arizona that allow scientists to study ecosystem processes across a range of scales - from microscopic root studies to studies encompassing large watersheds. In particular, a group of researchers is studying why large stands of pinion-juniper forests across the southwest have died in recent years. Biosphere2’s role in this

Scenario simulation based assessment of subsurface energy storage

Science.gov (United States)

Beyer, C.; Bauer, S.; Dahmke, A.

2014-12-01

Energy production from renewable sources such as solar or wind power is characterized by temporally varying power supply. The politically intended transition towards renewable energies in Germany („Energiewende") hence requires the installation of energy storage technologies to compensate for the fluctuating production. In this context, subsurface energy storage represents a viable option due to large potential storage capacities and the wide prevalence of suited geological formations. Technologies for subsurface energy storage comprise cavern or deep porous media storage of synthetic hydrogen or methane from electrolysis and methanization, or compressed air, as well as heat storage in shallow or moderately deep porous formations. Pressure build-up, fluid displacement or temperature changes induced by such operations may affect local and regional groundwater flow, geomechanical behavior, groundwater geochemistry and microbiology. Moreover, subsurface energy storage may interact and possibly be in conflict with other "uses" like drinking water abstraction or ecological goods and functions. An utilization of the subsurface for energy storage therefore requires an adequate system and process understanding for the evaluation and assessment of possible impacts of specific storage operations on other types of subsurface use, the affected environment and protected entities. This contribution presents the framework of the ANGUS+ project, in which tools and methods are developed for these types of assessments. Synthetic but still realistic scenarios of geological energy storage are derived and parameterized for representative North German storage sites by data acquisition and evaluation, and experimental work. Coupled numerical hydraulic, thermal, mechanical and reactive transport (THMC) simulation tools are developed and applied to simulate the energy storage and subsurface usage scenarios, which are analyzed for an assessment and generalization of the imposed THMC

Microbial Dark Matter: Unusual intervening sequences in 16S rRNA genes of candidate phyla from the deep subsurface

Energy Technology Data Exchange (ETDEWEB)

Jarett, Jessica; Stepanauskas, Ramunas; Kieft, Thomas; Onstott, Tullis; Woyke, Tanja

2014-03-17

The Microbial Dark Matter project has sequenced genomes from over 200 single cells from candidate phyla, greatly expanding our knowledge of the ecology, inferred metabolism, and evolution of these widely distributed, yet poorly understood lineages. The second phase of this project aims to sequence an additional 800 single cells from known as well as potentially novel candidate phyla derived from a variety of environments. In order to identify whole genome amplified single cells, screening based on phylogenetic placement of 16S rRNA gene sequences is being conducted. Briefly, derived 16S rRNA gene sequences are aligned to a custom version of the Greengenes reference database and added to a reference tree in ARB using parsimony. In multiple samples from deep subsurface habitats but not from other habitats, a large number of sequences proved difficult to align and therefore to place in the tree. Based on comparisons to reference sequences and structural alignments using SSU-ALIGN, many of these ?difficult? sequences appear to originate from candidate phyla, and contain intervening sequences (IVSs) within the 16S rRNA genes. These IVSs are short (39 - 79 nt) and do not appear to be self-splicing or to contain open reading frames. IVSs were found in the loop regions of stem-loop structures in several different taxonomic groups. Phylogenetic placement of sequences is strongly affected by IVSs; two out of three groups investigated were classified as different phyla after their removal. Based on data from samples screened in this project, IVSs appear to be more common in microbes occurring in deep subsurface habitats, although the reasons for this remain elusive.

Disruptive Event Biosphere Dose Conversion Factor Analysis

Energy Technology Data Exchange (ETDEWEB)

M. Wasiolek

2004-09-08

This analysis report is one of the technical reports containing documentation of the Environmental Radiation Model for Yucca Mountain, Nevada (ERMYN), a biosphere model supporting the total system performance assessment (TSPA) for the license application (LA) for the Yucca Mountain repository. This analysis report describes the development of biosphere dose conversion factors (BDCFs) for the volcanic ash exposure scenario, and the development of dose factors for calculating inhalation dose during volcanic eruption. A graphical representation of the documentation hierarchy for the ERMYN is presented in Figure 1-1. This figure shows the interrelationships among the products (i.e., analysis and model reports) developed for biosphere modeling and provides an understanding of how this analysis report contributes to biosphere modeling. This report is one of two reports that develop biosphere BDCFs, which are input parameters for the TSPA model. The ''Biosphere Model Report'' (BSC 2004 [DIRS 169460]) describes in detail the ERMYN conceptual model and mathematical model. The input parameter reports, shown to the right of the Biosphere Model Report in Figure 1-1, contain detailed descriptions of the model input parameters, their development and the relationship between the parameters and specific features, events and processes (FEPs). This report describes biosphere model calculations and their output, the BDCFs, for the volcanic ash exposure scenario. This analysis receives direct input from the outputs of the ''Biosphere Model Report'' (BSC 2004 [DIRS 169460]) and from the five analyses that develop parameter values for the biosphere model (BSC 2004 [DIRS 169671]; BSC 2004 [DIRS 169672]; BSC 2004 [DIRS 169673]; BSC 2004 [DIRS 169458]; and BSC 2004 [DIRS 169459]). The results of this report are further analyzed in the ''Biosphere Dose Conversion Factor Importance and Sensitivity Analysis''. The objective of this

Disruptive Event Biosphere Dose Conversion Factor Analysis

International Nuclear Information System (INIS)

M. Wasiolek

2004-01-01

This analysis report is one of the technical reports containing documentation of the Environmental Radiation Model for Yucca Mountain, Nevada (ERMYN), a biosphere model supporting the total system performance assessment (TSPA) for the license application (LA) for the Yucca Mountain repository. This analysis report describes the development of biosphere dose conversion factors (BDCFs) for the volcanic ash exposure scenario, and the development of dose factors for calculating inhalation dose during volcanic eruption. A graphical representation of the documentation hierarchy for the ERMYN is presented in Figure 1-1. This figure shows the interrelationships among the products (i.e., analysis and model reports) developed for biosphere modeling and provides an understanding of how this analysis report contributes to biosphere modeling. This report is one of two reports that develop biosphere BDCFs, which are input parameters for the TSPA model. The ''Biosphere Model Report'' (BSC 2004 [DIRS 169460]) describes in detail the ERMYN conceptual model and mathematical model. The input parameter reports, shown to the right of the Biosphere Model Report in Figure 1-1, contain detailed descriptions of the model input parameters, their development and the relationship between the parameters and specific features, events and processes (FEPs). This report describes biosphere model calculations and their output, the BDCFs, for the volcanic ash exposure scenario. This analysis receives direct input from the outputs of the ''Biosphere Model Report'' (BSC 2004 [DIRS 169460]) and from the five analyses that develop parameter values for the biosphere model (BSC 2004 [DIRS 169671]; BSC 2004 [DIRS 169672]; BSC 2004 [DIRS 169673]; BSC 2004 [DIRS 169458]; and BSC 2004 [DIRS 169459]). The results of this report are further analyzed in the ''Biosphere Dose Conversion Factor Importance and Sensitivity Analysis''. The objective of this analysis was to develop the BDCFs for the volcanic ash

DISRUPTIVE EVENT BIOSPHERE DOSE CONVERSION FACTOR ANALYSIS

International Nuclear Information System (INIS)

M.A. Wasiolek

2005-01-01

This analysis report is one of the technical reports containing documentation of the Environmental Radiation Model for Yucca Mountain, Nevada (ERMYN), a biosphere model supporting the total system performance assessment (TSPA) for the license application (LA) for the Yucca Mountain repository. This analysis report describes the development of biosphere dose conversion factors (BDCFs) for the volcanic ash exposure scenario, and the development of dose factors for calculating inhalation dose during volcanic eruption. A graphical representation of the documentation hierarchy for the ERMYN is presented in Figure 1-1. This figure shows the interrelationships among the products (i.e., analysis and model reports) developed for biosphere modeling and provides an understanding of how this analysis report contributes to biosphere modeling. This report is one of two reports that develop biosphere BDCFs, which are input parameters for the TSPA model. The Biosphere Model Report (BSC 2004 [DIRS 169460]) describes in detail the ERMYN conceptual model and mathematical model. The input parameter reports, shown to the right of the Biosphere Model Report in Figure 1-1, contain detailed descriptions of the model input parameters, their development and the relationship between the parameters and specific features, events and processes (FEPs). This report describes biosphere model calculations and their output, the BDCFs, for the volcanic ash exposure scenario. This analysis receives direct input from the outputs of the ''Biosphere Model Report'' (BSC 2004 [DIRS 169460]) and from the five analyses that develop parameter values for the biosphere model (BSC 2005 [DIRS 172827]; BSC 2004 [DIRS 169672]; BSC 2004 [DIRS 169673]; BSC 2004 [DIRS 169458]; and BSC 2004 [DIRS 169459]). The results of this report are further analyzed in the ''Biosphere Dose Conversion Factor Importance and Sensitivity Analysis'' (Figure 1-1). The objective of this analysis was to develop the BDCFs for the volcanic

Disruptive Event Biosphere Dose Conversion Factor Analysis

Energy Technology Data Exchange (ETDEWEB)

M. A. Wasiolek

2003-07-21

This analysis report, ''Disruptive Event Biosphere Dose Conversion Factor Analysis'', is one of the technical reports containing documentation of the ERMYN (Environmental Radiation Model for Yucca Mountain Nevada) biosphere model for the geologic repository at Yucca Mountain, its input parameters, and the application of the model to perform the dose assessment for the repository. The biosphere model is one of a series of process models supporting the Total System Performance Assessment (TSPA) for the Yucca Mountain repository. A graphical representation of the documentation hierarchy for the ERMYN is presented in Figure 1-1. This figure shows the interrelationships among the products (i.e., analysis and model reports) developed for biosphere modeling and provides an understanding of how this analysis report contributes to biosphere modeling. This report is one of the two reports that develop biosphere dose conversion factors (BDCFs), which are input parameters for the TSPA model. The ''Biosphere Model Report'' (BSC 2003 [DIRS 164186]) describes in detail the conceptual model as well as the mathematical model and lists its input parameters. Model input parameters are developed and described in detail in five analysis report (BSC 2003 [DIRS 160964], BSC 2003 [DIRS 160965], BSC 2003 [DIRS 160976], BSC 2003 [DIRS 161239], and BSC 2003 [DIRS 161241]). The objective of this analysis was to develop the BDCFs for the volcanic ash exposure scenario and the dose factors (DFs) for calculating inhalation doses during volcanic eruption (eruption phase of the volcanic event). The volcanic ash exposure scenario is hereafter referred to as the volcanic ash scenario. For the volcanic ash scenario, the mode of radionuclide release into the biosphere is a volcanic eruption through the repository with the resulting entrainment of contaminated waste in the tephra and the subsequent atmospheric transport and dispersion of contaminated material in

Disruptive Event Biosphere Dose Conversion Factor Analysis

International Nuclear Information System (INIS)

M. A. Wasiolek

2003-01-01

This analysis report, ''Disruptive Event Biosphere Dose Conversion Factor Analysis'', is one of the technical reports containing documentation of the ERMYN (Environmental Radiation Model for Yucca Mountain Nevada) biosphere model for the geologic repository at Yucca Mountain, its input parameters, and the application of the model to perform the dose assessment for the repository. The biosphere model is one of a series of process models supporting the Total System Performance Assessment (TSPA) for the Yucca Mountain repository. A graphical representation of the documentation hierarchy for the ERMYN is presented in Figure 1-1. This figure shows the interrelationships among the products (i.e., analysis and model reports) developed for biosphere modeling and provides an understanding of how this analysis report contributes to biosphere modeling. This report is one of the two reports that develop biosphere dose conversion factors (BDCFs), which are input parameters for the TSPA model. The ''Biosphere Model Report'' (BSC 2003 [DIRS 164186]) describes in detail the conceptual model as well as the mathematical model and lists its input parameters. Model input parameters are developed and described in detail in five analysis report (BSC 2003 [DIRS 160964], BSC 2003 [DIRS 160965], BSC 2003 [DIRS 160976], BSC 2003 [DIRS 161239], and BSC 2003 [DIRS 161241]). The objective of this analysis was to develop the BDCFs for the volcanic ash exposure scenario and the dose factors (DFs) for calculating inhalation doses during volcanic eruption (eruption phase of the volcanic event). The volcanic ash exposure scenario is hereafter referred to as the volcanic ash scenario. For the volcanic ash scenario, the mode of radionuclide release into the biosphere is a volcanic eruption through the repository with the resulting entrainment of contaminated waste in the tephra and the subsequent atmospheric transport and dispersion of contaminated material in the biosphere. The biosphere process

Analysis of Critical Issues in Biosphere Assessment Modelling and Site Investigation

Energy Technology Data Exchange (ETDEWEB)

Egan, M.J.; Thorne, M.C.; Little, R.H.; Pasco, R.F. [Quintessa Limited, Henley-on-Thames (United Kingdom)

2003-07-01

The aim of this document is to present a critical review of issues concerned with the treatment of the biosphere and geosphere-biosphere interface in long-term performance assessment studies for nuclear waste disposal in Sweden. The review covers three main areas of investigation: a review of SKB's plans for undertaking site investigations at candidate locations for the development of a deep geological repository for spent fuel; identification of critical uncertainties associated with SKB's treatment of the geosphere-biosphere interface in recent performance assessments; and a preliminary modelling investigation of the significance of features, events and processes in the near-surface environment in terms of their effect on the accumulation and redistribution of radionuclides at the geosphere-biosphere interface. Overall, SKB's proposals for site investigations are considered to be comprehensive and, if they can be carried out to the specification presented, will constitute a benchmark that other waste management organisations will have to work hard to emulate. The main concern is that expertise for undertaking the investigations and reporting the results could be stretched very thin. The authors have also identified weaknesses in the documentation concerning the collection of evidence for environmental change and on developing scenarios for future environmental change. A fundamental assumption adopted in the renewed assessment of the SFR 1 repository, which is not discussed or justified in any of the documentation that has been reviewed, is that radionuclides enter the water column of the coastal and lake models directly, without passing first through the bed sediments. The modelling study reported herein suggests that SKB's models are robust to range of alternative conceptual descriptions relating to the geosphere-biosphere interface. There are however situations, in which contaminated groundwater is released via sediment rather than directly

Analysis of Critical Issues in Biosphere Assessment Modelling and Site Investigation

International Nuclear Information System (INIS)

Egan, M.J.; Thorne, M.C.; Little, R.H.; Pasco, R.F.

2003-07-01

The aim of this document is to present a critical review of issues concerned with the treatment of the biosphere and geosphere-biosphere interface in long-term performance assessment studies for nuclear waste disposal in Sweden. The review covers three main areas of investigation: a review of SKB's plans for undertaking site investigations at candidate locations for the development of a deep geological repository for spent fuel; identification of critical uncertainties associated with SKB's treatment of the geosphere-biosphere interface in recent performance assessments; and a preliminary modelling investigation of the significance of features, events and processes in the near-surface environment in terms of their effect on the accumulation and redistribution of radionuclides at the geosphere-biosphere interface. Overall, SKB's proposals for site investigations are considered to be comprehensive and, if they can be carried out to the specification presented, will constitute a benchmark that other waste management organisations will have to work hard to emulate. The main concern is that expertise for undertaking the investigations and reporting the results could be stretched very thin. The authors have also identified weaknesses in the documentation concerning the collection of evidence for environmental change and on developing scenarios for future environmental change. A fundamental assumption adopted in the renewed assessment of the SFR 1 repository, which is not discussed or justified in any of the documentation that has been reviewed, is that radionuclides enter the water column of the coastal and lake models directly, without passing first through the bed sediments. The modelling study reported herein suggests that SKB's models are robust to range of alternative conceptual descriptions relating to the geosphere-biosphere interface. There are however situations, in which contaminated groundwater is released via sediment rather than directly to the water column

A minimalistic microbial food web in an excavated deep subsurface clay rock.

Science.gov (United States)

Bagnoud, Alexandre; de Bruijn, Ino; Andersson, Anders F; Diomidis, Nikitas; Leupin, Olivier X; Schwyn, Bernhard; Bernier-Latmani, Rizlan

2016-01-01

Clay rocks are being considered for radioactive waste disposal, but relatively little is known about the impact of microbes on the long-term safety of geological repositories. Thus, a more complete understanding of microbial community structure and function in these environments would provide further detail for the evaluation of the safety of geological disposal of radioactive waste in clay rocks. It would also provide a unique glimpse into a poorly studied deep subsurface microbial ecosystem. Previous studies concluded that microorganisms were present in pristine Opalinus Clay, but inactive. In this work, we describe the microbial community and assess the metabolic activities taking place within borehole water. Metagenomic sequencing and genome-binning of a porewater sample containing suspended clay particles revealed a remarkably simple heterotrophic microbial community, fueled by sedimentary organic carbon, mainly composed of two organisms: a Pseudomonas sp. fermenting bacterium growing on organic macromolecules and releasing organic acids and H2, and a sulfate-reducing Peptococcaceae able to oxidize organic molecules to CO(2). In Opalinus Clay, this microbial system likely thrives where pore space allows it. In a repository, this may occur where the clay rock has been locally damaged by excavation or in engineered backfills. © FEMS 2015. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Chapter 2. Radionuclides in the biosphere

International Nuclear Information System (INIS)

Toelgyessy, J.; Harangozo, M.

2000-01-01

This is a chapter of textbook of radioecology for university students. In this chapter authors deal with role of radionuclides in the biosphere. Chapter consists of next parts: (1) Natural radionuclides in biosphere; (2) Man-made radionuclides in the biosphere; (3) Ecologically important radionuclides; (4) Natural background; (5) Radiotoxicity and (6) Paths of transfer of radionuclides from the source to human

Respiratory Pathways Reconstructed by Multi-Omics Analysis in Melioribacter roseus, Residing in a Deep Thermal Aquifer of the West-Siberian Megabasin

Science.gov (United States)

Gavrilov, Sergey; Podosokorskaya, Olga; Alexeev, Dmitry; Merkel, Alexander; Khomyakova, Maria; Muntyan, Maria; Altukhov, Ilya; Butenko, Ivan; Bonch-Osmolovskaya, Elizaveta; Govorun, Vadim; Kublanov, Ilya

2017-01-01

Melioribacter roseus, a representative of recently proposed Ignavibacteriae phylum, is a metabolically versatile thermophilic bacterium, inhabiting subsurface biosphere of the West-Siberian megabasin and capable of growing on various substrates and electron acceptors. Genomic analysis followed by inhibitor studies and membrane potential measurements of aerobically grown M. roseus cells revealed the activity of aerobic respiratory electron transfer chain comprised of respiratory complexes I and IV, and an alternative complex III. Phylogeny reconstruction revealed that oxygen reductases belonged to atypical cc(o/b)o3-type and canonical cbb3–type cytochrome oxidases. Also, two molybdoenzymes of M. roseus were affiliated either with Ttr or Psr/Phs clades, but not with typical respiratory arsenate reductases of the Arr clade. Expression profiling, both at transcripts and protein level, allowed us to assign the role of the terminal respiratory oxidase under atmospheric oxygen concentration for the cc(o/b)o3 cytochrome oxidase, previously proposed to serve for oxygen detoxification only. Transcriptomic analysis revealed the involvement of both molybdoenzymes of M. roseus in As(V) respiration, yet differences in the genomic context of their gene clusters allow to hypothesize about their distinct roles in arsenate metabolism with the ‘Psr/Phs’-type molybdoenzyme being the most probable candidate respiratory arsenate reductase. Basing on multi-omics data, the pathways for aerobic and arsenate respiration were proposed. Our results start to bridge the vigorously increasing gap between homology-based predictions and experimentally verified metabolic processes, what is especially important for understudied microorganisms of novel lineages from deep subsurface environments of Eurasia, which remained separated from the rest of the biosphere for several geological periods. PMID:28713355

Respiratory Pathways Reconstructed by Multi-Omics Analysis in Melioribacter roseus, Residing in a Deep Thermal Aquifer of the West-Siberian Megabasin

Directory of Open Access Journals (Sweden)

Sergey Gavrilov

2017-06-01

Full Text Available Melioribacter roseus, a representative of recently proposed Ignavibacteriae phylum, is a metabolically versatile thermophilic bacterium, inhabiting subsurface biosphere of the West-Siberian megabasin and capable of growing on various substrates and electron acceptors. Genomic analysis followed by inhibitor studies and membrane potential measurements of aerobically grown M. roseus cells revealed the activity of aerobic respiratory electron transfer chain comprised of respiratory complexes I and IV, and an alternative complex III. Phylogeny reconstruction revealed that oxygen reductases belonged to atypical cc(o/bo3-type and canonical cbb3–type cytochrome oxidases. Also, two molybdoenzymes of M. roseus were affiliated either with Ttr or Psr/Phs clades, but not with typical respiratory arsenate reductases of the Arr clade. Expression profiling, both at transcripts and protein level, allowed us to assign the role of the terminal respiratory oxidase under atmospheric oxygen concentration for the cc(o/bo3 cytochrome oxidase, previously proposed to serve for oxygen detoxification only. Transcriptomic analysis revealed the involvement of both molybdoenzymes of M. roseus in As(V respiration, yet differences in the genomic context of their gene clusters allow to hypothesize about their distinct roles in arsenate metabolism with the ‘Psr/Phs’-type molybdoenzyme being the most probable candidate respiratory arsenate reductase. Basing on multi-omics data, the pathways for aerobic and arsenate respiration were proposed. Our results start to bridge the vigorously increasing gap between homology-based predictions and experimentally verified metabolic processes, what is especially important for understudied microorganisms of novel lineages from deep subsurface environments of Eurasia, which remained separated from the rest of the biosphere for several geological periods.

Work in support of biosphere assessments for solid radioactive waste disposal. 2. biosphere FEP list and biosphere modelling

Energy Technology Data Exchange (ETDEWEB)

Egan, M J; Maul, P R; Watkins, B M; Venter, A [QuantiSci Ltd., Henley-on-Thames (United Kingdom)

2001-10-01

In order to assist SSI in its reappraisal of the SFR safety case, QuantiSci has been appointed to develop a systematic framework within which to conduct the review of SKB's post-closure performance assessment (PA). The biosphere FEP list presented here was developed for use as reference material in conducting the review. SSI wishes to develop an independent PA capability for a time-dependent biosphere in preparation for the examination of the revised SFR safety case. This report documents the model development that has been undertaken by QuantiSci using the Amber computer code.

Work in support of biosphere assessments for solid radioactive waste disposal. 2. biosphere FEP list and biosphere modelling

International Nuclear Information System (INIS)

Egan, M.J.; Maul, P.R.; Watkins, B.M.; Venter, A.

2001-10-01

In order to assist SSI in its reappraisal of the SFR safety case, QuantiSci has been appointed to develop a systematic framework within which to conduct the review of SKB's post-closure performance assessment (PA). The biosphere FEP list presented here was developed for use as reference material in conducting the review. SSI wishes to develop an independent PA capability for a time-dependent biosphere in preparation for the examination of the revised SFR safety case. This report documents the model development that has been undertaken by QuantiSci using the Amber computer code

Deep subsurface drip irrigation using coal-bed sodic water: part I. water and solute movement

Science.gov (United States)

Bern, Carleton R.; Breit, George N.; Healy, Richard W.; Zupancic, John W.; Hammack, Richard

2013-01-01

Water co-produced with coal-bed methane (CBM) in the semi-arid Powder River Basin of Wyoming and Montana commonly has relatively low salinity and high sodium adsorption ratios that can degrade soil permeability where used for irrigation. Nevertheless, a desire to derive beneficial use from the water and a need to dispose of large volumes of it have motivated the design of a deep subsurface drip irrigation (SDI) system capable of utilizing that water. Drip tubing is buried 92 cm deep and irrigates at a relatively constant rate year-round, while evapotranspiration by the alfalfa and grass crops grown is seasonal. We use field data from two sites and computer simulations of unsaturated flow to understand water and solute movements in the SDI fields. Combined irrigation and precipitation exceed potential evapotranspiration by 300-480 mm annually. Initially, excess water contributes to increased storage in the unsaturated zone, and then drainage causes cyclical rises in the water table beneath the fields. Native chloride and nitrate below 200 cm depth are leached by the drainage. Some CBM water moves upward from the drip tubing, drawn by drier conditions above. Chloride from CBM water accumulates there as root uptake removes the water. Year over year accumulations indicated by computer simulations illustrate that infiltration of precipitation water from the surface only partially leaches such accumulations away. Field data show that 7% and 27% of added chloride has accumulated above the drip tubing in an alfalfa and grass field, respectively, following 6 years of irrigation. Maximum chloride concentrations in the alfalfa field are around 45 cm depth but reach the surface in parts of the grass field, illustrating differences driven by crop physiology. Deep SDI offers a means of utilizing marginal quality irrigation waters and managing the accumulation of their associated solutes in the crop rooting zone.

Physiologically anaerobic microorganisms of the deep subsurface. Progress report, June 1, 1991--May 31, 1992

Energy Technology Data Exchange (ETDEWEB)

Stevens, S.E. Jr.; Chung, K.T.

1992-06-01

A variety of different media were used to isolate facultatively (FAB) and obligately anaerobic bacteria (OAB). These bacteria were isolated from core subsamples obtained from boreholes at the Idaho National Engineering Lab. (INEL) or at the Hanford Lab. (Yakima). Core material was sampled at various depths to 600 feet below the surface. All core samples with culturable bacteria contained at least FAB making thisthe most common physiological type of anaerobic bacteria present in the deep subsurface at these two sites. INEL core samples are characterized by isolates of both FAB and OAB. No isolates of acetogenic, methanogenic, or sulfate reducing bacteria were obtained. Yakima core samples are characterized by a marked predominance of FAB in comparison to OAB. In addition, isolates of acetogenic, methanogenic, and sulfate reducing bacteria were obtained. The Yakima site has the potential for complete anaerobic mineralization of organic compounds whereas this potential appears to be lacking at INEL.

Biosphere 2: The True Story.

Science.gov (United States)

O'Keeffe, Michael

1992-01-01

Discusses the history and current developments of the Biosphere 2 Project, a prototype for enclosed self-sustaining structures for space colonization built in the Arizona Desert. Biosphere 2 was created to educate and provide solutions to environmental problems and revenue from research. (MCO)

The water cycle in closed ecological systems: Perspectives from the Biosphere 2 and Laboratory Biosphere systems

Science.gov (United States)

Nelson, Mark; Dempster, W. F.; Allen, J. P.

2009-12-01

To achieve sustainable, healthy closed ecological systems requires solutions to challenges of closing the water cycle - recycling wastewater/irrigation water/soil medium leachate and evaporated water and supplying water of required quality as needed for different needs within the facility. Engineering Biosphere 2, the first multi-biome closed ecological system within a total airtight footprint of 12,700 m 2 with a combined volume of 200,000 m 3 with a total water capacity of some 6 × 10 6 L of water was especially challenging because it included human inhabitants, their agricultural and technical systems, as well as five analogue ecosystems ranging from rainforest to desert, freshwater ecologies to saltwater systems like mangrove and mini-ocean coral reef ecosystems. By contrast, the Laboratory Biosphere - a small (40 m 3 volume) soil-based plant growth facility with a footprint of 15 m 2 - is a very simplified system, but with similar challenges re salinity management and provision of water quality suitable for plant growth. In Biosphere 2, water needs included supplying potable water for people and domestic animals, irrigation water for a wide variety of food crops, and recycling and recovering soil nutrients from wastewater. In the wilderness biomes, providing adequately low salinity freshwater terrestrial ecosystems and maintaining appropriate salinity and pH in aquatic/marine ecosystems were challenges. The largest reservoirs in Biosphere 2 were the ocean/marsh with some 4 × 10 6 L, soil with 1 to 2 × 10 6 l, primary storage tank with 0 to 8 × 10 5 L and storage tanks for condensate and soil leachate collection and mixing tanks with a capacity of 1.6 × 10 5 L to supply irrigation for farm and wilderness ecosystems. Other reservoirs were far smaller - humidity in the atmosphere (2 × 10 3 L), streams in the rainforest and savannah, and seasonal pools in the desert were orders of magnitude smaller (8 × 10 4 L). Key technologies included condensation from

The PSACOIN level 1B exercise: A probabilistic code intercomparison involving a four compartment biosphere model

International Nuclear Information System (INIS)

Klos, R.A.; Sinclair, J.E.; Torres, C.; Mobbs, S.F.; Galson, D.A.

1991-01-01

The probabilistic Systems Assessment Code (PSAC) User Group of the OECD Nuclear Energy Agency has organised a series of code intercomparison studies of relevance to the performance assessment of underground repositories for radioactive wastes - known collectively by the name PSACOIN. The latest of these to be undertaken is designated PSACOIN Level 1b, and the case specification provides a complete assessment model of the behaviour of radionuclides following release into the biosphere. PSACOIN Level 1b differs from other biosphere oriented intercomparison exercises in that individual dose is the end point of the calculations as opposed to any other intermediate quantity. The PSACOIN Level 1b case specification describes a simple source term which is used to simulate the release of activity to the biosphere from certain types of near surface waste repository, the transport of radionuclides through the biosphere and their eventual uptake by humankind. The biosphere sub model comprises 4 compartments representing top and deep soil layers, river water and river sediment. The transport of radionuclides between the physical compartments is described by ten transfer coefficients and doses to humankind arise from the simultaneous consumption of water, fish, meat, milk, and grain as well as from dust inhalation and external γ-irradiation. The parameters of the exposure pathway sub model are chosen to be representative of an individual living in a small agrarian community. (13 refs., 3 figs., 2 tabs.)

Environmental Transport Input Parameters for the Biosphere Model

International Nuclear Information System (INIS)

M. Wasiolek

2004-01-01

This analysis report is one of the technical reports documenting the Environmental Radiation Model for Yucca Mountain, Nevada (ERMYN), a biosphere model supporting the total system performance assessment for the license application (TSPA-LA) for the geologic repository at Yucca Mountain. A graphical representation of the documentation hierarchy for the ERMYN is presented in Figure 1-1. This figure shows relationships among the reports developed for biosphere modeling and biosphere abstraction products for the TSPA-LA, as identified in the ''Technical Work Plan for Biosphere Modeling and Expert Support'' (BSC 2004 [DIRS 169573]) (TWP). This figure provides an understanding of how this report contributes to biosphere modeling in support of the license application (LA). This report is one of the five reports that develop input parameter values for the biosphere model. The ''Biosphere Model Report'' (BSC 2004 [DIRS 169460]) describes the conceptual model and the mathematical model. The input parameter reports, shown to the right of the Biosphere Model Report in Figure 1-1, contain detailed description of the model input parameters. The output of this report is used as direct input in the ''Nominal Performance Biosphere Dose Conversion Factor Analysis'' and in the ''Disruptive Event Biosphere Dose Conversion Factor Analysis'' that calculate the values of biosphere dose conversion factors (BDCFs) for the groundwater and volcanic ash exposure scenarios, respectively. The purpose of this analysis was to develop biosphere model parameter values related to radionuclide transport and accumulation in the environment. These parameters support calculations of radionuclide concentrations in the environmental media (e.g., soil, crops, animal products, and air) resulting from a given radionuclide concentration at the source of contamination (i.e., either in groundwater or in volcanic ash). The analysis was performed in accordance with the TWP (BSC 2004 [DIRS 169573])

Environmental Transport Input Parameters for the Biosphere Model

Energy Technology Data Exchange (ETDEWEB)

M. Wasiolek

2004-09-10

This analysis report is one of the technical reports documenting the Environmental Radiation Model for Yucca Mountain, Nevada (ERMYN), a biosphere model supporting the total system performance assessment for the license application (TSPA-LA) for the geologic repository at Yucca Mountain. A graphical representation of the documentation hierarchy for the ERMYN is presented in Figure 1-1. This figure shows relationships among the reports developed for biosphere modeling and biosphere abstraction products for the TSPA-LA, as identified in the ''Technical Work Plan for Biosphere Modeling and Expert Support'' (BSC 2004 [DIRS 169573]) (TWP). This figure provides an understanding of how this report contributes to biosphere modeling in support of the license application (LA). This report is one of the five reports that develop input parameter values for the biosphere model. The ''Biosphere Model Report'' (BSC 2004 [DIRS 169460]) describes the conceptual model and the mathematical model. The input parameter reports, shown to the right of the Biosphere Model Report in Figure 1-1, contain detailed description of the model input parameters. The output of this report is used as direct input in the ''Nominal Performance Biosphere Dose Conversion Factor Analysis'' and in the ''Disruptive Event Biosphere Dose Conversion Factor Analysis'' that calculate the values of biosphere dose conversion factors (BDCFs) for the groundwater and volcanic ash exposure scenarios, respectively. The purpose of this analysis was to develop biosphere model parameter values related to radionuclide transport and accumulation in the environment. These parameters support calculations of radionuclide concentrations in the environmental media (e.g., soil, crops, animal products, and air) resulting from a given radionuclide concentration at the source of contamination (i.e., either in groundwater or in volcanic ash). The analysis

Characteristics of the Receptor for the Biosphere Model

International Nuclear Information System (INIS)

Wasiolek, M.A.; Rautenstrauch, K.R.

2003-01-01

This analysis report is one of the technical reports containing documentation of the Environmental Radiation Model for Yucca Mountain Nevada (ERMYN), a biosphere model supporting the Total System Performance Assessment (TSPA) for the geologic repository at Yucca Mountain. A graphical representation of the documentation hierarchy for the ERMYN is presented in Figure 1-1. This figure shows relationships among the products (i.e., analysis and model reports) developed for biosphere modeling and biosphere abstraction products for TSPA, as identified in the ''Technical Work Plan: for Biosphere Modeling and Expert Support'' (TWP) (BSC 2003). Some documents identified in Figure 1-1 may be under development and not available at the time this report is issued. This figure is included to provide an understanding of how this analysis report contributes to biosphere modeling in support of the license application, and access to the listed documents is not required to understand the contents of this report. This report is one of the reports that develop input parameter values for the biosphere model. The ''Biosphere Model Report'' (BSC 2003), describes the conceptual model as well as the mathematical model and its input parameters. The purpose of this analysis report is to define values for biosphere model parameters that are related to the dietary, lifestyle, and dosimetric characteristics of the receptor. The biosphere model, consistent with the licensing rule at 10 CFR Part 63, uses a hypothetical person called the reasonably maximally exposed individual (RMEI) to represent the potentially exposed population. The parameters that define the RMEI are based on the behaviors and characteristics of the Amargosa Valley population, consistent with the requirements of 10 CFR 63.312. Amargosa Valley is the community, located in the direction of the projected groundwater flow path, where most of the farming in the area occurs. The parameter values developed in this report support the

Work in support of biosphere assessments for solid radioactive waste disposal. 2. biosphere FEP list and biosphere modelling

Energy Technology Data Exchange (ETDEWEB)

Egan, M.J.; Maul, P.R.; Watkins, B.M.; Venter, A. [QuantiSci Ltd., Henley-on-Thames (United Kingdom)

2001-10-01

In order to assist SSI in its reappraisal of the SFR safety case, QuantiSci has been appointed to develop a systematic framework within which to conduct the review of SKB's post-closure performance assessment (PA). The biosphere FEP list presented here was developed for use as reference material in conducting the review. SSI wishes to develop an independent PA capability for a time-dependent biosphere in preparation for the examination of the revised SFR safety case. This report documents the model development that has been undertaken by QuantiSci using the Amber computer code.

Some Ecological Mechanisms to Generate Habitability in Planetary Subsurface Areas by Chemolithotrophic Communities: The Ro Tinto Subsurface Ecosystem as a Model System

Science.gov (United States)

Fernández-Remolar, David C.; Gómez, Felipe; Prieto-Ballesteros, Olga; Schelble, Rachel T.; Rodríguez, Nuria; Amiols, Ricardo

2008-02-01

Chemolithotrophic communities that colonize subsurface habitats have great relevance for the astrobiological exploration of our Solar System. We hypothesize that the chemical and thermal stabilization of an environment through microbial activity could make a given planetary region habitable. The MARTE project ground-truth drilling campaigns that sampled cryptic subsurface microbial communities in the basement of the Ro Tinto headwaters have shown that acidic surficial habitats are the result of the microbial oxidation of pyritic ores. The oxidation process is exothermic and releases heat under both aerobic and anaerobic conditions. These microbial communities can maintain the subsurface habitat temperature through storage heat if the subsurface temperature does not exceed their maximum growth temperature. In the acidic solutions of the Ro Tinto, ferric iron acts as an effective buffer for controlling water pH. Under anaerobic conditions, ferric iron is the oxidant used by microbes to decompose pyrite through the production of sulfate, ferrous iron, and protons. The integration between the physical and chemical processes mediated by microorganisms with those driven by the local geology and hydrology have led us to hypothesize that thermal and chemical regulation mechanisms exist in this environment and that these homeostatic mechanisms could play an essential role in creating habitable areas for other types of microorganisms. Therefore, searching for the physicochemical expression of extinct and extant homeostatic mechanisms through physical and chemical anomalies in the Mars crust (i.e., local thermal gradient or high concentration of unusual products such as ferric sulfates precipitated out from acidic solutions produced by hypothetical microbial communities) could be a first step in the search for biological traces of a putative extant or extinct Mars biosphere.

The biomass theme 1 project: Reference biospheres

International Nuclear Information System (INIS)

Crossland, I.; Torres-Vidal, C.

2000-01-01

The long-term safety of a facility for the disposal of long-lived radioactive waste would principally depend upon a combination of engineered and natural barriers which would ensure that the radioactivity was prevented from reaching the biosphere. To assess radiological safety over extended timescales requires the construction of 'assessment biospheres'. A possibility is the development of 'Reference Biospheres', a series of stylised, internationally-agreed assessment biospheres that could be used to support post-closure assessments in a wide variety of situations. Current activities in this subject area are described. (author)

Inhalation Exposure Input Parameters for the Biosphere Model

Energy Technology Data Exchange (ETDEWEB)

K. Rautenstrauch

2004-09-10

This analysis is one of 10 reports that support the Environmental Radiation Model for Yucca Mountain, Nevada (ERMYN) biosphere model. The ''Biosphere Model Report'' (BSC 2004 [DIRS 169460]) describes in detail the conceptual model as well as the mathematical model and its input parameters. This report documents development of input parameters for the biosphere model that are related to atmospheric mass loading and supports the use of the model to develop biosphere dose conversion factors (BDCFs). The biosphere model is one of a series of process models supporting the total system performance assessment (TSPA) for a Yucca Mountain repository. Inhalation Exposure Input Parameters for the Biosphere Model is one of five reports that develop input parameters for the biosphere model. A graphical representation of the documentation hierarchy for the ERMYN is presented in Figure 1-1. This figure shows the interrelationships among the products (i.e., analysis and model reports) developed for biosphere modeling, and the plan for development of the biosphere abstraction products for TSPA, as identified in the Technical Work Plan for Biosphere Modeling and Expert Support (BSC 2004 [DIRS 169573]). This analysis report defines and justifies values of mass loading for the biosphere model. Mass loading is the total mass concentration of resuspended particles (e.g., dust, ash) in a volume of air. Mass loading values are used in the air submodel of ERMYN to calculate concentrations of radionuclides in air inhaled by a receptor and concentrations in air surrounding crops. Concentrations in air to which the receptor is exposed are then used in the inhalation submodel to calculate the dose contribution to the receptor from inhalation of contaminated airborne particles. Concentrations in air surrounding plants are used in the plant submodel to calculate the concentrations of radionuclides in foodstuffs contributed from uptake by foliar interception.

Inhalation Exposure Input Parameters for the Biosphere Model

International Nuclear Information System (INIS)

K. Rautenstrauch

2004-01-01

This analysis is one of 10 reports that support the Environmental Radiation Model for Yucca Mountain, Nevada (ERMYN) biosphere model. The ''Biosphere Model Report'' (BSC 2004 [DIRS 169460]) describes in detail the conceptual model as well as the mathematical model and its input parameters. This report documents development of input parameters for the biosphere model that are related to atmospheric mass loading and supports the use of the model to develop biosphere dose conversion factors (BDCFs). The biosphere model is one of a series of process models supporting the total system performance assessment (TSPA) for a Yucca Mountain repository. Inhalation Exposure Input Parameters for the Biosphere Model is one of five reports that develop input parameters for the biosphere model. A graphical representation of the documentation hierarchy for the ERMYN is presented in Figure 1-1. This figure shows the interrelationships among the products (i.e., analysis and model reports) developed for biosphere modeling, and the plan for development of the biosphere abstraction products for TSPA, as identified in the Technical Work Plan for Biosphere Modeling and Expert Support (BSC 2004 [DIRS 169573]). This analysis report defines and justifies values of mass loading for the biosphere model. Mass loading is the total mass concentration of resuspended particles (e.g., dust, ash) in a volume of air. Mass loading values are used in the air submodel of ERMYN to calculate concentrations of radionuclides in air inhaled by a receptor and concentrations in air surrounding crops. Concentrations in air to which the receptor is exposed are then used in the inhalation submodel to calculate the dose contribution to the receptor from inhalation of contaminated airborne particles. Concentrations in air surrounding plants are used in the plant submodel to calculate the concentrations of radionuclides in foodstuffs contributed from uptake by foliar interception

Life in a dark biosphere: a review of circadian physiology in "arrhythmic" environments.

Science.gov (United States)

Beale, Andrew David; Whitmore, David; Moran, Damian

2016-12-01

Most of the life with which humans interact is exposed to highly rhythmic and extremely predictable changes in illumination that occur with the daily events of sunrise and sunset. However, while the influence of the sun feels omnipotent to surface dwellers such as ourselves, life on earth is dominated, in terms of biomass, by organisms isolated from the direct effects of the sun. A limited understanding of what life is like away from the sun can be inferred from our knowledge of physiology and ecology in the light biosphere, but a full understanding can only be gained by studying animals from the dark biosphere, both in the laboratory and in their natural habitats. One of the least understood aspects of life in the dark biosphere is the rhythmicity of physiology and what it means to live in an environment of low or no rhythmicity. Here we describe methods that may be used to understand rhythmic physiology in the dark and summarise some of the studies of rhythmic physiology in "arrhythmic" environments, such as the poles, deep sea and caves. We review what can be understood about the adaptive value of rhythmic physiology on the Earth's surface from studies of animals from arrhythmic environments and what role a circadian clock may play in the dark.

Inhalation Exposure Input Parameters for the Biosphere Model

Energy Technology Data Exchange (ETDEWEB)

M. Wasiolek

2006-06-05

This analysis is one of the technical reports that support the Environmental Radiation Model for Yucca Mountain, Nevada (ERMYN), referred to in this report as the biosphere model. ''Biosphere Model Report'' (BSC 2004 [DIRS 169460]) describes in detail the conceptual model as well as the mathematical model and its input parameters. This report documents development of input parameters for the biosphere model that are related to atmospheric mass loading and supports the use of the model to develop biosphere dose conversion factors (BDCFs). The biosphere model is one of a series of process models supporting the total system performance assessment (TSPA) for a Yucca Mountain repository. ''Inhalation Exposure Input Parameters for the Biosphere Model'' is one of five reports that develop input parameters for the biosphere model. A graphical representation of the documentation hierarchy for the biosphere model is presented in Figure 1-1 (based on BSC 2006 [DIRS 176938]). This figure shows the interrelationships among the products (i.e., analysis and model reports) developed for biosphere modeling and how this analysis report contributes to biosphere modeling. This analysis report defines and justifies values of atmospheric mass loading for the biosphere model. Mass loading is the total mass concentration of resuspended particles (e.g., dust, ash) in a volume of air. Mass loading values are used in the air submodel of the biosphere model to calculate concentrations of radionuclides in air inhaled by a receptor and concentrations in air surrounding crops. Concentrations in air to which the receptor is exposed are then used in the inhalation submodel to calculate the dose contribution to the receptor from inhalation of contaminated airborne particles. Concentrations in air surrounding plants are used in the plant submodel to calculate the concentrations of radionuclides in foodstuffs contributed from uptake by foliar interception. This

Inhalation Exposure Input Parameters for the Biosphere Model

International Nuclear Information System (INIS)

M. Wasiolek

2006-01-01

This analysis is one of the technical reports that support the Environmental Radiation Model for Yucca Mountain, Nevada (ERMYN), referred to in this report as the biosphere model. ''Biosphere Model Report'' (BSC 2004 [DIRS 169460]) describes in detail the conceptual model as well as the mathematical model and its input parameters. This report documents development of input parameters for the biosphere model that are related to atmospheric mass loading and supports the use of the model to develop biosphere dose conversion factors (BDCFs). The biosphere model is one of a series of process models supporting the total system performance assessment (TSPA) for a Yucca Mountain repository. ''Inhalation Exposure Input Parameters for the Biosphere Model'' is one of five reports that develop input parameters for the biosphere model. A graphical representation of the documentation hierarchy for the biosphere model is presented in Figure 1-1 (based on BSC 2006 [DIRS 176938]). This figure shows the interrelationships among the products (i.e., analysis and model reports) developed for biosphere modeling and how this analysis report contributes to biosphere modeling. This analysis report defines and justifies values of atmospheric mass loading for the biosphere model. Mass loading is the total mass concentration of resuspended particles (e.g., dust, ash) in a volume of air. Mass loading values are used in the air submodel of the biosphere model to calculate concentrations of radionuclides in air inhaled by a receptor and concentrations in air surrounding crops. Concentrations in air to which the receptor is exposed are then used in the inhalation submodel to calculate the dose contribution to the receptor from inhalation of contaminated airborne particles. Concentrations in air surrounding plants are used in the plant submodel to calculate the concentrations of radionuclides in foodstuffs contributed from uptake by foliar interception. This report is concerned primarily with the

Microbial potential for carbon and nutrient cycling in a geogenic supercritical carbon dioxide reservoir.

Science.gov (United States)

Freedman, Adam J E; Tan, BoonFei; Thompson, Janelle R

2017-06-01

Microorganisms catalyze carbon cycling and biogeochemical reactions in the deep subsurface and thus may be expected to influence the fate of injected supercritical (sc) CO 2 following geological carbon sequestration (GCS). We hypothesized that natural subsurface scCO 2 reservoirs, which serve as analogs for the long-term fate of sequestered scCO 2 , harbor a 'deep carbonated biosphere' with carbon cycling potential. We sampled subsurface fluids from scCO 2 -water separators at a natural scCO 2 reservoir at McElmo Dome, Colorado for analysis of 16S rRNA gene diversity and metagenome content. Sequence annotations indicated dominance of Sulfurospirillum, Rhizobium, Desulfovibrio and four members of the Clostridiales family. Genomes extracted from metagenomes using homology and compositional approaches revealed diverse mechanisms for growth and nutrient cycling, including pathways for CO 2 and N 2 fixation, anaerobic respiration, sulfur oxidation, fermentation and potential for metabolic syntrophy. Differences in biogeochemical potential between two production well communities were consistent with differences in fluid chemical profiles, suggesting a potential link between microbial activity and geochemistry. The existence of a microbial ecosystem associated with the McElmo Dome scCO 2 reservoir indicates that potential impacts of the deep biosphere on CO 2 fate and transport should be taken into consideration as a component of GCS planning and modelling. © 2017 The Authors. Environmental Microbiology published by Society for Applied Microbiology and John Wiley & Sons Ltd.

The Biosphere as a Living System. On Peculiarities of the Evolutionary Process on the Biosphere Level

Directory of Open Access Journals (Sweden)

Alexej Yablokov

2016-10-01

Full Text Available The main purpose of this second essay the “biospherology” is to streamline and formalize the existing knowledge about the biosphere, to develop the theoretical basis of the theory of evolution of the biosphere. Despite the vast amount of research on ways of origin and development of life, yet there is no generally accepted theory of evolution of life on Earth, which would not only contain the phenomenology of this process, but also an understanding of the mechanism of functioning of the biosphere as a self-regulating living organism. In the first essay, the necessity of such an understanding to preserve life-supporting functions of the biosphere under increasing anthropogenic pressure. As solution it has been proposed in the form of transition to the managed (controlled evolution of the biosphere – to process of maintenance of life-supporting ability of the biosphere by management of Humankind activity. This essay is an attempt to create a consistent picture of the structure and functioning of the Earth life, the main achievements of the evolution of life, led to the almost completely closed (to the Anthropocene self-sustaining biosphere cycling of substance and energy, the growth of "sum of life" and evolve the social form of matter from biological one. The proposed view of the multidimensional picture of life on Earth consists of the determination of necessary and sufficient properties of a life matter, formulate functioning principles of the life, and determind of the different levels of organization of life. Among the main features of living: discreetness, integritiness, self-reproducibility, dissymmetriness, cooperativeness, mortality, orderness, energy saturation, informational content. Among the main principles of the functioning of the life: the unity of the biological structure (phenotype and the program for its construction (genotype, transmitted in generations; matrix way of transmission of the programs of development

Characteristics of the Receptor for the Biosphere Model

Energy Technology Data Exchange (ETDEWEB)

M.A. Wasiolek; K.R. Rautenstrauch

2003-06-27

This analysis report is one of the technical reports containing documentation of the Environmental Radiation Model for Yucca Mountain Nevada (ERMYN), a biosphere model supporting the Total System Performance Assessment (TSPA) for the geologic repository at Yucca Mountain. A graphical representation of the documentation hierarchy for the ERMYN is presented in Figure 1-1. This figure shows relationships among the products (i.e., analysis and model reports) developed for biosphere modeling and biosphere abstraction products for TSPA, as identified in the ''Technical Work Plan: for Biosphere Modeling and Expert Support'' (TWP) (BSC 2003). Some documents identified in Figure 1-1 may be under development and not available at the time this report is issued. This figure is included to provide an understanding of how this analysis report contributes to biosphere modeling in support of the license application, and access to the listed documents is not required to understand the contents of this report. This report is one of the reports that develop input parameter values for the biosphere model. The ''Biosphere Model Report'' (BSC 2003), describes the conceptual model as well as the mathematical model and its input parameters. The purpose of this analysis report is to define values for biosphere model parameters that are related to the dietary, lifestyle, and dosimetric characteristics of the receptor. The biosphere model, consistent with the licensing rule at 10 CFR Part 63, uses a hypothetical person called the reasonably maximally exposed individual (RMEI) to represent the potentially exposed population. The parameters that define the RMEI are based on the behaviors and characteristics of the Amargosa Valley population, consistent with the requirements of 10 CFR 63.312. Amargosa Valley is the community, located in the direction of the projected groundwater flow path, where most of the farming in the area occurs. The parameter values

Transport of radionuclides in the biosphere

International Nuclear Information System (INIS)

Bundi, A.

1983-10-01

The dispersion of radionuclides in the biosphere and their uptake by man via various nutritional pathways is studied using a compartment model. The sample environment is the area of the lower Limmat and Aare valleys. General considerations of the compartmental description of the biosphere are made. The problem of the description of surface features, in particular soil, sediment and water, is studied in detail using the code BIOPATH. This study is intended to be an example of how a model of the biosphere could be constructed. It is shown that this is a reasonable model to calculate the spreading of radionuclides in the biosphere and that it indicates the relative significance of individual compartments, pathways and radionuclides. Calculated values of dose committment, however, should not be used as reference data for safety analyses. (Auth.)

Some ecological mechanisms to generate habitability in planetary subsurface areas by chemolithotrophic communities: the Río Tinto subsurface ecosystem as a model system.

Science.gov (United States)

Fernández-Remolar, David C; Gómez, Felipe; Prieto-Ballesteros, Olga; Schelble, Rachel T; Rodríguez, Nuria; Amils, Ricardo

2008-02-01

Chemolithotrophic communities that colonize subsurface habitats have great relevance for the astrobiological exploration of our Solar System. We hypothesize that the chemical and thermal stabilization of an environment through microbial activity could make a given planetary region habitable. The MARTE project ground-truth drilling campaigns that sampled cryptic subsurface microbial communities in the basement of the Río Tinto headwaters have shown that acidic surficial habitats are the result of the microbial oxidation of pyritic ores. The oxidation process is exothermic and releases heat under both aerobic and anaerobic conditions. These microbial communities can maintain the subsurface habitat temperature through storage heat if the subsurface temperature does not exceed their maximum growth temperature. In the acidic solutions of the Río Tinto, ferric iron acts as an effective buffer for controlling water pH. Under anaerobic conditions, ferric iron is the oxidant used by microbes to decompose pyrite through the production of sulfate, ferrous iron, and protons. The integration between the physical and chemical processes mediated by microorganisms with those driven by the local geology and hydrology have led us to hypothesize that thermal and chemical regulation mechanisms exist in this environment and that these homeostatic mechanisms could play an essential role in creating habitable areas for other types of microorganisms. Therefore, searching for the physicochemical expression of extinct and extant homeostatic mechanisms through physical and chemical anomalies in the Mars crust (i.e., local thermal gradient or high concentration of unusual products such as ferric sulfates precipitated out from acidic solutions produced by hypothetical microbial communities) could be a first step in the search for biological traces of a putative extant or extinct Mars biosphere.

Waste Disposal: Processes Taking Place (on the way) from the Repository to the Biosphere

International Nuclear Information System (INIS)

Put, M.

2000-01-01

The main objective of SCK-CEN's R and D programme on the processes taking place on the way from the repository to the biosphere is to provide reliable and defensible models and parameters on the migration of dissolved radionuclides and gases through the host formation (Boom Clay) and the backfill materials of a deep geological repository for high level radioactive waste. The programme and main achievements in this topical area in 1999 are summarised

Lignocellulose deconstruction in the biosphere

Energy Technology Data Exchange (ETDEWEB)

Bomble, Yannick J.; Lin, Chien-Yuan; Amore, Antonella; Wei, Hui; Holwerda, Evert K.; Ciesielski, Peter N.; Donohoe, Bryon S.; Decker, Stephen R.; Lynd, Lee R.; Himmel, Michael E.

2017-12-01

Microorganisms have evolved different and yet complementary mechanisms to degrade biomass in the biosphere. The chemical biology of lignocellulose deconstruction is a complex and intricate process that appears to vary in response to specific ecosystems. These microorganisms rely on simple to complex arrangements of glycoside hydrolases to conduct most of these polysaccharide depolymerization reactions and also, as discovered more recently, oxidative mechanisms via lytic polysaccharide monooxygenases or non-enzymatic Fenton reactions which are used to enhance deconstruction. It is now clear that these deconstruction mechanisms are often more efficient in the presence of the microorganisms. In general, a major fraction of the total plant biomass deconstruction in the biosphere results from the action of various microorganisms, primarily aerobic bacteria and fungi, as well as a variety of anaerobic bacteria. Beyond carbon recycling, specialized microorganisms interact with plants to manage nitrogen in the biosphere. Understanding the interplay between these organisms within or across ecosystems is crucial to further our grasp of chemical recycling in the biosphere and also enables optimization of the burgeoning plant-based bioeconomy.

Lignocellulose deconstruction in the biosphere.

Science.gov (United States)

Bomble, Yannick J; Lin, Chien-Yuan; Amore, Antonella; Wei, Hui; Holwerda, Evert K; Ciesielski, Peter N; Donohoe, Bryon S; Decker, Stephen R; Lynd, Lee R; Himmel, Michael E

2017-12-01

Microorganisms have evolved different and yet complementary mechanisms to degrade biomass in the biosphere. The chemical biology of lignocellulose deconstruction is a complex and intricate process that appears to vary in response to specific ecosystems. These microorganisms rely on simple to complex arrangements of glycoside hydrolases to conduct most of these polysaccharide depolymerization reactions and also, as discovered more recently, oxidative mechanisms via lytic polysaccharide monooxygenases or non-enzymatic Fenton reactions which are used to enhance deconstruction. It is now clear that these deconstruction mechanisms are often more efficient in the presence of the microorganisms. In general, a major fraction of the total plant biomass deconstruction in the biosphere results from the action of various microorganisms, primarily aerobic bacteria and fungi, as well as a variety of anaerobic bacteria. Beyond carbon recycling, specialized microorganisms interact with plants to manage nitrogen in the biosphere. Understanding the interplay between these organisms within or across ecosystems is crucial to further our grasp of chemical recycling in the biosphere and also enables optimization of the burgeoning plant-based bioeconomy. Copyright © 2017. Published by Elsevier Ltd.

Microbial colonisation in diverse surface soil types in Surtsey and diversity analysis of its subsurface microbiota

Science.gov (United States)

Marteinsson, V.; Klonowski, A.; Reynisson, E.; Vannier, P.; Sigurdsson, B. D.; Ólafsson, M.

2014-09-01

Colonisation of life on Surtsey has been observed systematically since the formation of the island 50 years ago. Although the first colonisers were prokaryotes, such as bacteria and blue-green algae, most studies have been focusing on settlement of plants and animals but less on microbial succession. To explore microbial colonization in diverse soils and the influence of associate vegetation and birds on numbers of environmental bacteria, we collected 45 samples from different soils types on the surface of the island. Total viable bacterial counts were performed with plate count at 22, 30 and 37 °C for all soils samples and the amount of organic matter and nitrogen (N) was measured. Selected samples were also tested for coliforms, faecal coliforms aerobic and anaerobic bacteria. The deep subsurface biosphere was investigated by collecting liquid subsurface samples from a 182 m borehole with a special sampler. Diversity analysis of uncultivated biota in samples was performed by 16S rRNA gene sequences analysis and cultivation. Correlation was observed between N deficits and the number of microorganisms in surface soils samples. The lowest number of bacteria (1 × 104-1 × 105 g-1) was detected in almost pure pumice but the count was significant higher (1 × 106-1 × 109 g-1) in vegetated soil or pumice with bird droppings. The number of faecal bacteria correlated also to the total number of bacteria and type of soil. Bacteria belonging to Enterobacteriaceae were only detected in vegetated and samples containing bird droppings. The human pathogens Salmonella, Campylobacter and Listeria were not in any sample. Both thermophilic bacteria and archaea 16S rDNA sequences were found in the subsurface samples collected at 145 m and 172 m depth at 80 °C and 54 °C, respectively, but no growth was observed in enrichments. The microbiota sequences generally showed low affiliation to any known 16S rRNA gene sequences.

Direct thermal effects of the Hadean bombardment did not limit early subsurface habitability

Science.gov (United States)

Grimm, R. E.; Marchi, S.

2018-03-01

Intense bombardment is considered characteristic of the Hadean and early Archean eons, yet some detrital zircons indicate that near-surface water was present and thus at least intervals of clement conditions may have existed. We investigate the habitability of the top few kilometers of the subsurface by updating a prior approach to thermal evolution of the crust due to impact heating, using a revised bombardment history, a more accurate thermal model, and treatment of melt sheets from large projectiles (>100 km diameter). We find that subsurface habitable volume grows nearly continuously throughout the Hadean and early Archean (4.5-3.5 Ga) because impact heat is dissipated rapidly compared to the total duration and waning strength of the bombardment. Global sterilization was only achieved using an order of magnitude more projectiles in 1/10 the time. Melt sheets from large projectiles can completely resurface the Earth several times prior to ∼4.2 Ga but at most once since then. Even in the Hadean, melt sheets have little effect on habitability because cooling times are short compared to resurfacing intervals, allowing subsurface biospheres to be locally re-established by groundwater infiltration between major impacts. Therefore the subsurface is always habitable somewhere, and production of global steam or silicate-vapor atmospheres are the only remaining avenues to early surface sterilization by bombardment.

The Biosphere: A Decadal Vision

Science.gov (United States)

Peterson, David L.; Curran, Paul J.; Mlynzcak, Marty; Miller, Richard

2003-01-01

This paper focuses on biosphere-climate interactions including the influences of human activities. Recognizing this is only one aspect of biospheric processes, this places an emphasis of those biogeochemical processes that have a profound effect on numerous other aspects of the biosphere and the services it provides, services which are critical to sustaining life on Earth. And, the paper will focus on the various scientific aspects of assessing the availability of fresh water, including its sensitivity to climate variance and land use changes. Finally, this paper hopes to emphasize the potential role that greatly expanded space observations and interactive modeling can play in developing our understanding of Earth and its the living systems.

Probing the Rare Biosphere of the North-West Mediterranean Sea: An Experiment with High Sequencing Effort.

Directory of Open Access Journals (Sweden)

Bibiana G Crespo

Full Text Available High-throughput sequencing (HTS techniques have suggested the existence of a wealth of species with very low relative abundance: the rare biosphere. We attempted to exhaustively map this rare biosphere in two water samples by performing an exceptionally deep pyrosequencing analysis (~500,000 final reads per sample. Species data were derived by a 97% identity criterion and various parametric distributions were fitted to the observed counts. Using the best-fitting Sichel distribution we estimate a total species richness of 1,568-1,669 (95% Credible Interval and 5,027-5,196 for surface and deep water samples respectively, implying that 84-89% of the total richness in those two samples was sequenced, and we predict that a quadrupling of the present sequencing effort would suffice to observe 90% of the total richness in both samples. Comparing the HTS results with a culturing approach we found that most of the cultured taxa were not obtained by HTS, despite the high sequencing effort. Culturing therefore remains a useful tool for uncovering marine bacterial diversity, in addition to its other uses for studying the ecology of marine bacteria.

Probing the Rare Biosphere of the North-West Mediterranean Sea: An Experiment with High Sequencing Effort.

Science.gov (United States)

Crespo, Bibiana G; Wallhead, Philip J; Logares, Ramiro; Pedrós-Alió, Carlos

2016-01-01

High-throughput sequencing (HTS) techniques have suggested the existence of a wealth of species with very low relative abundance: the rare biosphere. We attempted to exhaustively map this rare biosphere in two water samples by performing an exceptionally deep pyrosequencing analysis (~500,000 final reads per sample). Species data were derived by a 97% identity criterion and various parametric distributions were fitted to the observed counts. Using the best-fitting Sichel distribution we estimate a total species richness of 1,568-1,669 (95% Credible Interval) and 5,027-5,196 for surface and deep water samples respectively, implying that 84-89% of the total richness in those two samples was sequenced, and we predict that a quadrupling of the present sequencing effort would suffice to observe 90% of the total richness in both samples. Comparing the HTS results with a culturing approach we found that most of the cultured taxa were not obtained by HTS, despite the high sequencing effort. Culturing therefore remains a useful tool for uncovering marine bacterial diversity, in addition to its other uses for studying the ecology of marine bacteria.

Nominal Performance Biosphere Dose Conversion Factor Analysis

International Nuclear Information System (INIS)

M.A. Wasiolek

2005-01-01

This analysis report is one of the technical reports containing documentation of the Environmental Radiation Model for Yucca Mountain, Nevada (ERMYN), a biosphere model supporting the Total System Performance Assessment (TSPA) for the license application (LA) for the Yucca Mountain repository. This analysis report describes the development of biosphere dose conversion factors (BDCFs) for the groundwater exposure scenario, and the development of conversion factors for assessing compliance with the groundwater protection standards. A graphical representation of the documentation hierarchy for the ERMYN is presented in Figure 1-1. This figure shows the interrelationships among the products (i.e., analysis and model reports) developed for biosphere modeling and provides an understanding of how this analysis report contributes to biosphere modeling. This report is one of two reports that develop BDCFs, which are input parameters for the TSPA-LA model. The ''Biosphere Model Report'' (BSC 2004 [DIRS 169460]) describes in detail the ERMYN conceptual model and mathematical model. The input parameter reports, shown to the right of the ''Biosphere Model Report'' in Figure 1-1, contain detailed description of the model input parameters, their development, and the relationship between the parameters and specific features events and processes (FEPs). This report describes biosphere model calculations and their output, the BDCFs, for the groundwater exposure scenario. This analysis receives direct input from the outputs of the ''Biosphere Model Report'' (BSC 2004 [DIRS 169460]) and the five analyses that develop parameter values for the biosphere model (BSC 2005 [DIRS 172827]; BSC 2004 [DIRS 169672]; BSC 2004 [DIRS 169673]; BSC 2004 [DIRS 169458]; BSC 2004 [DIRS 169459]). The results of this report are further analyzed in the ''Biosphere Dose Conversion Factor Importance and Sensitivity Analysis'' (Figure 1-1). The objectives of this analysis are to develop BDCFs for the

Exchange Processes at Geosphere-Biosphere Interface

International Nuclear Information System (INIS)

Worman, A.; Sjogren, B.; Dverstorp, B.; Xu, S.

2004-01-01

The radioecological models included in performance assessments to date by the Swedish nuclear industry for existing and planned nuclear waste repositories do not explicitly represent the transport of radionuclides from bedrock into the near-surface geological environment. It has been argued that bypassing the transition zone from the bedrock to the quarternary deposits and the biosphere (the geosphere-biosphere interface, GBI) leads to conservative estimates of estimated doses and risk. This study demonstrates that this may not always be true. The study is based on an integrated model representation of a release of radionuclides from a hypothetical repository, transport through the crystalline bedrock and the near-surface deposits to the biosphere. A three-dimensional flow model is developed, which has a fairly accurate description of both surface and groundwater hydrology and is coupled to radioecological models. The development has great significance for estimation of flow field at the repository level as well as for estimation of transport pathways and residence time distributions for radionuclides. The modelling approach is based on the characterisation of radionuclide residence times in the bedrock and the quaternary deposits, as well as the distribution of radionuclides in ecosystems. Simulation examples are presented to illustrate the relative importance of transport processes in the quaternary sediments and the hydraulic interaction between the bedrock, quaternary deposits and various ecosystems. The modelling results show that, in many cases, taking into account the biosphere-geosphere interface leads to a delay of radionuclide arrival to the biosphere. For other conditions, the more precise prediction of radionuclide ex-filtration locations in the biosphere can result in higher environmental concentrations compared with estimates based on diluting radionuclide in a large area. An improved representation of these processes will enhance our understanding of

System and method for earth probing with deep subsurface penetration using low frequency electromagnetic signals

International Nuclear Information System (INIS)

Etten, P. van; Brown, R.D.

1996-01-01

An earth probing system uses deep penetration of electromagnetic waves into soil and other media. Advantage is taken of lower attenuation of radar in soil by frequencies of about three megahertz or less. Bursts of electromagnetic energy of various frequencies in this range are consecutively transmitted. The transmitting antenna is continuously tuned, so as to maintain resonance during each burst, allowing large circulating currents and high power output. In a receiving antenna system, a dual antenna arrangement is providing for obtaining improved reception. A corresponding dual antenna circuit employs 'a spatial notch filtering', automatic adjustment of antenna gain-frequency variations, as well as compensation for transmitter gain variation. The system may be implemented in a totally analog, totally digital, or hybrid manner. Preferably, a signal processing method detected and digitally samples signal reflected from subsurface layers and buried objects. The invention provides means for removing system distortions and interfering signals, for compensating for aliasing errors and frequency-dependent antenna gain and phase variations, and for avoiding masking errors introduced by strong reflections. (author)

Novel determination of radon-222 velocity in deep subsurface rocks, and the feasibility to using radon as an earthquake precursor

Science.gov (United States)

Zafrir, Hovav; Benhorin, Yochy; Malik, Uri; Chemo, Chaim

2016-04-01

An enhanced radon monitoring system was designed in order to study shallow versus deep subsurface processes affecting the appearance of radon anomalies. The method is based on the assumption that the climatic influence is limited since its energy decreases with the decrease in thickness of the geological cover whereby its effect is reduced to a negligible value at depth. Hence, lowering gamma and alpha detectors into deep boreholes and monitoring their temporal variations relative to a reference couple at shallow depths of 10-40 m eliminates the ambient thermal and pressure-induced contribution from the total radon time series. It allows highlighting the residual portion of the radon signals that might be associated with the geodynamic processes. The primary technological key is the higher sensitivity of the gamma detectors - in comparison to the solid-state alpha detectors, which are also suitable for threading into narrow boreholes in parallel to the narrow gamma detector (Zafrir et al., 2013*). The unique achievements of the novel system that was installed at the Sde Eliezer site close to the Hula Valley western border fault (HWBF) in northern Israel are: a) Determination, for the first time, of the radon movement velocity within rock layers at depths of several tens of meters, namely, 25 m per hour on average; b) Distinguishing between the diurnal periodical effect of the ambient temperature and the semi-diurnal effect of the ambient pressure on the radon temporal spectrum; c) Identification of a radon random pre-seismic anomaly preceding the Nuweiba, M 5.5 earthquake of 27 June 2015 that occurred within Dead Sea Fault Zone. * Zafrir, H., Barbosa, S.M. and Malik, U., 2013. Differentiation between the effect of temperature and pressure on radon within the subsurface geological media, Radiat. Meas., 49, 39-56. doi:10.1016/j.radmeas.2012.11.019.

Characteristics of the Receptor for the Biosphere Model

International Nuclear Information System (INIS)

M. Wasiolek; K. Rautenstrauch

2004-01-01

This analysis report is one of a series of technical reports that document the Environmental Radiation Model for Yucca Mountain, Nevada (ERMYN), a biosphere model supporting the total system performance assessment (TSPA) for the geologic repository at Yucca Mountain. This report is one of the five biosphere reports that develop input parameter values for the biosphere model. The ''Biosphere Model Report'' (BSC 2004 [DIRS 169460]) describes the conceptual model, as well as the mathematical model and its input parameters. Figure 1-1 is a graphical representation of the documentation hierarchy for the ERMYN. This figure shows relationships among the products (i.e., scientific analyses and model reports) developed for biosphere modeling and biosphere abstraction products for TSPA, as identified in the ''Technical Work Plan: for Biosphere Modeling and Expert Support'' (BSC 2004 [DIRS 169573]). The purpose of this analysis report is to define values for biosphere model parameters that are related to the dietary, lifestyle, and dosimetric characteristics of the receptor. The biosphere model, consistent with the licensing rule at 10 CFR Part 63 [DIRS 156605], uses a hypothetical person called the reasonably maximally exposed individual (RMEI) to represent the potentially exposed population. The parameters that define the RMEI are based on the behaviors and characteristics of the residents of the unincorporated town of Amargosa Valley, consistent with the requirements of 10 CFR 63.312 [DIRS 156605]. The output of this report is used as direct input in the two analyses identified in Figure 1-1 that calculate the values of biosphere dose conversion factors (BDCFs) for the groundwater and volcanic ash exposure scenarios. The parameter values developed in this report are reflected in the TSPA through the BDCFs. The analysis was performed in accordance with AP-SIII.9Q, ''Scientific Analyses'', and the technical work plan (BSC 2004 [DIRS 169573])

Network Analysis of Earth's Co-Evolving Geosphere and Biosphere

Science.gov (United States)

Hazen, R. M.; Eleish, A.; Liu, C.; Morrison, S. M.; Meyer, M.; Consortium, K. D.

2017-12-01

A fundamental goal of Earth science is the deep understanding of Earth's dynamic, co-evolving geosphere and biosphere through deep time. Network analysis of geo- and bio- `big data' provides an interactive, quantitative, and predictive visualization framework to explore complex and otherwise hidden high-dimension features of diversity, distribution, and change in the evolution of Earth's geochemistry, mineralogy, paleobiology, and biochemistry [1]. Networks also facilitate quantitative comparison of different geological time periods, tectonic settings, and geographical regions, as well as different planets and moons, through network metrics, including density, centralization, diameter, and transitivity.We render networks by employing data related to geographical, paragenetic, environmental, or structural relationships among minerals, fossils, proteins, and microbial taxa. An important recent finding is that the topography of many networks reflects parameters not explicitly incorporated in constructing the network. For example, networks for minerals, fossils, and protein structures reveal embedded qualitative time axes, with additional network geometries possibly related to extinction and/or other punctuation events (see Figure). Other axes related to chemical activities and volatile fugacities, as well as pressure and/or depth of formation, may also emerge from network analysis. These patterns provide new insights into the way planets evolve, especially Earth's co-evolving geosphere and biosphere. 1. Morrison, S.M. et al. (2017) Network analysis of mineralogical systems. American Mineralogist 102, in press. Figure Caption: A network of Phanerozoic Era fossil animals from the past 540 million years includes blue, red, and black circles (nodes) representing family-level taxa and grey lines (links) between coexisting families. Age information was not used in the construction of this network; nevertheless an intrinsic timeline is embedded in the network topology. In

Environmental Transport Input Parameters for the Biosphere Model

Energy Technology Data Exchange (ETDEWEB)

M. A. Wasiolek

2003-06-27

This analysis report is one of the technical reports documenting the Environmental Radiation Model for Yucca Mountain Nevada (ERMYN), a biosphere model supporting the total system performance assessment (TSPA) for the geologic repository at Yucca Mountain. A graphical representation of the documentation hierarchy for the ERMYN is presented in Figure 1-1. This figure shows relationships among the reports developed for biosphere modeling and biosphere abstraction products for the TSPA, as identified in the ''Technical Work Plan: for Biosphere Modeling and Expert Support'' (TWP) (BSC 2003 [163602]). Some documents in Figure 1-1 may be under development and not available when this report is issued. This figure provides an understanding of how this report contributes to biosphere modeling in support of the license application (LA), but access to the listed documents is not required to understand the contents of this report. This report is one of the reports that develops input parameter values for the biosphere model. The ''Biosphere Model Report'' (BSC 2003 [160699]) describes the conceptual model, the mathematical model, and the input parameters. The purpose of this analysis is to develop biosphere model parameter values related to radionuclide transport and accumulation in the environment. These parameters support calculations of radionuclide concentrations in the environmental media (e.g., soil, crops, animal products, and air) resulting from a given radionuclide concentration at the source of contamination (i.e., either in groundwater or volcanic ash). The analysis was performed in accordance with the TWP (BSC 2003 [163602]). This analysis develops values of parameters associated with many features, events, and processes (FEPs) applicable to the reference biosphere (DTN: M00303SEPFEPS2.000 [162452]), which are addressed in the biosphere model (BSC 2003 [160699]). The treatment of these FEPs is described in BSC (2003 [160699

Environmental Transport Input Parameters for the Biosphere Model

International Nuclear Information System (INIS)

Wasiolek, M. A.

2003-01-01

This analysis report is one of the technical reports documenting the Environmental Radiation Model for Yucca Mountain Nevada (ERMYN), a biosphere model supporting the total system performance assessment (TSPA) for the geologic repository at Yucca Mountain. A graphical representation of the documentation hierarchy for the ERMYN is presented in Figure 1-1. This figure shows relationships among the reports developed for biosphere modeling and biosphere abstraction products for the TSPA, as identified in the ''Technical Work Plan: for Biosphere Modeling and Expert Support'' (TWP) (BSC 2003 [163602]). Some documents in Figure 1-1 may be under development and not available when this report is issued. This figure provides an understanding of how this report contributes to biosphere modeling in support of the license application (LA), but access to the listed documents is not required to understand the contents of this report. This report is one of the reports that develops input parameter values for the biosphere model. The ''Biosphere Model Report'' (BSC 2003 [160699]) describes the conceptual model, the mathematical model, and the input parameters. The purpose of this analysis is to develop biosphere model parameter values related to radionuclide transport and accumulation in the environment. These parameters support calculations of radionuclide concentrations in the environmental media (e.g., soil, crops, animal products, and air) resulting from a given radionuclide concentration at the source of contamination (i.e., either in groundwater or volcanic ash). The analysis was performed in accordance with the TWP (BSC 2003 [163602]). This analysis develops values of parameters associated with many features, events, and processes (FEPs) applicable to the reference biosphere (DTN: M00303SEPFEPS2.000 [162452]), which are addressed in the biosphere model (BSC 2003 [160699]). The treatment of these FEPs is described in BSC (2003 [160699], Section 6.2). Parameter values

Biogeographical distribution and diversity of microbes in methane hydrate-bearing deep marine sediments, on the Pacific Ocean Margin

DEFF Research Database (Denmark)

Inagaki, F.; Nunoura, T.; Nakagawa, S.

2006-01-01

The deep subseafloor biosphere is among the least-understood habitats on Earth, even though the huge microbial biomass therein plays an important role for potential long-term controls on global biogeochemical cycles. We report here the vertical and geographical distribution of microbes and their ......The deep subseafloor biosphere is among the least-understood habitats on Earth, even though the huge microbial biomass therein plays an important role for potential long-term controls on global biogeochemical cycles. We report here the vertical and geographical distribution of microbes...... of the uncultivated Deep-Sea Archaeal Group were consistently the dominant phylotype in sediments associated with methane hydrate. Sediment cores lacking methane hydrates displayed few or no Deep-Sea Archaeal Group phylotypes. Bacterial communities in the methane hydrate-bearing sediments were dominated by members...

Nominal Performance Biosphere Dose Conversion Factor Analysis

Energy Technology Data Exchange (ETDEWEB)

M.A. Wasiolek

2005-04-28

This analysis report is one of the technical reports containing documentation of the Environmental Radiation Model for Yucca Mountain, Nevada (ERMYN), a biosphere model supporting the Total System Performance Assessment (TSPA) for the license application (LA) for the Yucca Mountain repository. This analysis report describes the development of biosphere dose conversion factors (BDCFs) for the groundwater exposure scenario, and the development of conversion factors for assessing compliance with the groundwater protection standards. A graphical representation of the documentation hierarchy for the ERMYN is presented in Figure 1-1. This figure shows the interrelationships among the products (i.e., analysis and model reports) developed for biosphere modeling and provides an understanding of how this analysis report contributes to biosphere modeling. This report is one of two reports that develop BDCFs, which are input parameters for the TSPA-LA model. The ''Biosphere Model Report'' (BSC 2004 [DIRS 169460]) describes in detail the ERMYN conceptual model and mathematical model. The input parameter reports, shown to the right of the ''Biosphere Model Report'' in Figure 1-1, contain detailed description of the model input parameters, their development, and the relationship between the parameters and specific features events and processes (FEPs). This report describes biosphere model calculations and their output, the BDCFs, for the groundwater exposure scenario. This analysis receives direct input from the outputs of the ''Biosphere Model Report'' (BSC 2004 [DIRS 169460]) and the five analyses that develop parameter values for the biosphere model (BSC 2005 [DIRS 172827]; BSC 2004 [DIRS 169672]; BSC 2004 [DIRS 169673]; BSC 2004 [DIRS 169458]; BSC 2004 [DIRS 169459]). The results of this report are further analyzed in the ''Biosphere Dose Conversion Factor Importance and Sensitivity Analysis

Inhalation Exposure Input Parameters for the Biosphere Model

International Nuclear Information System (INIS)

M. A. Wasiolek

2003-01-01

This analysis is one of the nine reports that support the Environmental Radiation Model for Yucca Mountain Nevada (ERMYN) biosphere model. The ''Biosphere Model Report'' (BSC 2003a) describes in detail the conceptual model as well as the mathematical model and its input parameters. This report documents a set of input parameters for the biosphere model, and supports the use of the model to develop biosphere dose conversion factors (BDCFs). The biosphere model is one of a series of process models supporting the Total System Performance Assessment (TSPA) for a Yucca Mountain repository. This report, ''Inhalation Exposure Input Parameters for the Biosphere Model'', is one of the five reports that develop input parameters for the biosphere model. A graphical representation of the documentation hierarchy for the ERMYN is presented in Figure 1-1. This figure shows the interrelationships among the products (i.e., analysis and model reports) developed for biosphere modeling, and the plan for development of the biosphere abstraction products for TSPA, as identified in the ''Technical Work Plan: for Biosphere Modeling and Expert Support'' (BSC 2003b). It should be noted that some documents identified in Figure 1-1 may be under development at the time this report is issued and therefore not available at that time. This figure is included to provide an understanding of how this analysis report contributes to biosphere modeling in support of the license application, and is not intended to imply that access to the listed documents is required to understand the contents of this analysis report. This analysis report defines and justifies values of mass loading, which is the total mass concentration of resuspended particles (e.g., dust, ash) in a volume of air. Measurements of mass loading are used in the air submodel of ERMYN to calculate concentrations of radionuclides in air surrounding crops and concentrations in air inhaled by a receptor. Concentrations in air to which the

Characteristics of the Receptor for the Biosphere Model

International Nuclear Information System (INIS)

M.A. Wasiolek

2005-01-01

This analysis report is one of a series of technical reports that document the Environmental Radiation Model for Yucca Mountain, Nevada (ERMYN), a biosphere model supporting the total system performance assessment (TSPA) for the geologic repository at Yucca Mountain. This report is one of the five biosphere reports that develop input parameter values for the biosphere model. The ''Biosphere Model Report'' (BSC 2004 [DIRS 169460]) describes the conceptual model, as well as the mathematical model and its input parameters. Figure 1-1 is a graphical representation of the documentation hierarchy for the ERMYN. This figure shows relationships among the products (i.e., scientific analyses and model reports) developed for biosphere modeling and biosphere abstraction products for TSPA, as identified in the ''Technical Work Plan for Biosphere Modeling and Expert Support'' (BSC 2005 [DIRS 172782]). The purpose of this analysis report is to define values for biosphere model parameters that are related to the dietary, lifestyle, and dosimetric characteristics of the receptor. The biosphere model, consistent with the licensing rule at 10 CFR Part 63 [DIRS 173164], uses a hypothetical person called the reasonably maximally exposed individual (RMEI) to represent the potentially exposed population. The parameters that define the RMEI are based on the behaviors and characteristics of the residents of the unincorporated town of Amargosa Valley, consistent with the requirements of 10 CFR 63.312 [DIRS 173164]. The output of this report is used as direct input in the two analyses identified in Figure 1-1 that calculate the values of biosphere dose conversion factors (BDCFs) for the groundwater and volcanic ash exposure scenarios. The parameter values developed in this report are reflected in the TSPA through the BDCFs. The analysis was performed in accordance with LP-SIII.9Q-BSC, ''Scientific Analyses'', and the technical work plan (BSC 2005 [DIRS 172782]). The scope of the revision was

The landscape-scale radionuclide transport model used in Posiva biosphere assessment 2012

Energy Technology Data Exchange (ETDEWEB)

Broed, R. [Facilia A (Finland); Hjerpe, T. [Facilia AB (Finland); Ikonen, A.T.K. [Environmental Research and Assessment EnviroCase, Ltd. (Finland)

2014-07-01

Construction of a deep geological repository for spent nuclear fuel in the Olkiluoto Island on the south-western coast of Finland is under preparation. This work presents the reference landscape-scale model for radionuclide fate and transport in the biosphere that was implemented as a part of the safety case underpinning the nuclear construction license of the repository in 2012. The model was implemented with a large number of biosphere objects, covering any radiologically significant areas of the site and downstream locations, in order to account for the uncertainty in the geosphere release location. One important factor considered is the effect of land uplift, which has the consequence that the modelled landscape evolves with time, i.e. new land areas is continuously emerging from the sea and by overgrowth of lakes, and the modelled biosphere objects can change their biotope and composition over time. For example, a biosphere object that initially represents a part of the coast, can due to the land uplift eventually represent a lake. This lake might then at a later stage have dried up and formed a wetland that eventually is turned into a cropland. This means that the ecosystem-specific model parts used in one biosphere object, the related model parameters, and the available exposure pathways vary with time. A time-period of 10,000 years is simulated, with the assumption that a single spent fuel disposal canister initially fails its containment functions. The resulting activity concentrations in the environmental media that are produced by the simulation with the landscape model are used to estimate the doses to members of the public and dose-rates to non-human biota inhabiting the modelled region. In this work the focus is on the reference case model which represents a defective canister in a deposition hole that is cautiously selected, leading to geosphere releases just north of the current northern shoreline, but also a brief overview of two alternative models

Characteristics of the Receptor for the Biosphere Model

Energy Technology Data Exchange (ETDEWEB)

M. Wasiolek; K. Rautenstrauch

2004-09-09

This analysis report is one of a series of technical reports that document the Environmental Radiation Model for Yucca Mountain, Nevada (ERMYN), a biosphere model supporting the total system performance assessment (TSPA) for the geologic repository at Yucca Mountain. This report is one of the five biosphere reports that develop input parameter values for the biosphere model. The ''Biosphere Model Report'' (BSC 2004 [DIRS 169460]) describes the conceptual model, as well as the mathematical model and its input parameters. Figure 1-1 is a graphical representation of the documentation hierarchy for the ERMYN. This figure shows relationships among the products (i.e., scientific analyses and model reports) developed for biosphere modeling and biosphere abstraction products for TSPA, as identified in the ''Technical Work Plan: for Biosphere Modeling and Expert Support'' (BSC 2004 [DIRS 169573]). The purpose of this analysis report is to define values for biosphere model parameters that are related to the dietary, lifestyle, and dosimetric characteristics of the receptor. The biosphere model, consistent with the licensing rule at 10 CFR Part 63 [DIRS 156605], uses a hypothetical person called the reasonably maximally exposed individual (RMEI) to represent the potentially exposed population. The parameters that define the RMEI are based on the behaviors and characteristics of the residents of the unincorporated town of Amargosa Valley, consistent with the requirements of 10 CFR 63.312 [DIRS 156605]. The output of this report is used as direct input in the two analyses identified in Figure 1-1 that calculate the values of biosphere dose conversion factors (BDCFs) for the groundwater and volcanic ash exposure scenarios. The parameter values developed in this report are reflected in the TSPA through the BDCFs. The analysis was performed in accordance with AP-SIII.9Q, ''Scientific Analyses'', and the technical work

Impact on the deep biosphere of CO2 geological sequestration in (ultra)mafic rocks and retroactive consequences on its fate

Science.gov (United States)

Ménez, Bénédicte; Gérard, Emmanuelle; Rommevaux-Jestin, Céline; Dupraz, Sébastien; Guyot, François; Arnar Alfreősson, Helgi; Reynir Gíslason, Sigurőur; Sigurőardóttir, Hólmfríiur

2010-05-01

Due to their reactivity and high potential of carbonation, mafic and ultramafic rocks constitute targets of great interest to safely and permanently sequestrate anthropogenic CO2 and thus, limit the potential major environmental consequences of its increasing atmospheric level. In addition, subsurface (ultra)mafic environments are recognized to harbor diverse and active microbial populations that may be stimulated or decimated following CO2 injection (± impurities) and subsequent acidification. However, the nature and amplitude of the involved biogeochemical pathways are still unknown. To avoid unforeseen consequences at all time scales (e.g. reservoir souring and clogging, bioproduction of H2S and CH4), the impact of CO2 injection on deep biota with unknown ecology, and their retroactive effects on the capacity and long-term stability of CO2 storage sites, have to be determined. We present here combined field and experimental investigations focused on the Icelandic pilot site, implemented in the Hengill area (SW Iceland) at the Hellisheidi geothermal power plant (thanks to the CarbFix program, a consortium between the University of Iceland, Reykjavik Energy, the French CNRS of Toulouse and Columbia University in N.Y., U.S.A. and to the companion French ANR-CO2FIX project). This field scale injection of CO2 charged water is here designed to study the feasibility of storing permanently CO2 in basaltic rocks and to optimize industrial methods. Prior to the injection, the microbiological initial state was characterized through regular sampling at various seasons (i.e., October '08, July '09, February '10). DNA was extracted and amplified from the deep and shallow observatory wells, after filtration of 20 to 30 liters of groundwater collected in the depth interval 400-980 m using a specifically developed sampling protocol aiming at reducing contamination risks. An inventory of living indigenous bacteria and archaea was then done using molecular methods based on the

subsurface sequence delineation and saline water mapping of lagos

African Journals Online (AJOL)

A subsurface sequence delineation and saline water mapping of Lagos State was carried out. Ten (10) deep boreholes with average depth of 300 m were drilled within the sedimentary basin. The boreholes were lithologically and geophysically logged. The driller's lithological logs aided by gamma and resistivity logs, ...

The Biosphere as a Living System. On the Harmonization of Human and Biosphere Relationship

Directory of Open Access Journals (Sweden)

Alexey Yablokov

2017-02-01

Full Text Available The evolution of the biosphere has led to creation of astrophysical and telluric stable perfect system biotic regulation, which based on a high degree of closure of natural cycles. The development of human beings as bio-social, beyond the biological patterns, break these closed cycles, and dramatically broke the biotic regulation of the biosphere. As results — sustainable biosphere has become unsustainable anthroposphere. As with the origin of life physico-chemical regularities of the structure of matter turned out to be “mastered” life, as soon as with the emergence of anthroposphere physical-chemicalbiological regularities of evolution are complemented by social ones (including technology development and of the technosphere — as the essential content of anthroposphere. The result of the violation of natural biotic regulation broke a global environmental crisis that boomerang begins it is dangerous to human. It is theoretically possible to overcome this ecological crisis by the transition from the Neolithic paradigm of “nature conquest”, to the organization of “crisis management” of the biosphere (world system governance by the activity of the society restore and “repair” the damaged processes in the biosphere. This requires a new organization in all areas of human activity, i.e., a fundamentally new paradigm of human behavior on the planet. Development within the paradigm of the Neolithic culture (extensive use of natural resources, is inevitably associated with different kinds of wars in their redistribution, leads to an increasing accumulation of non-degradable waste (tertiary anthropogenic products, determines the fatal instability of anthroposphere and, therefore, unsustainable development of civilization. It is a mistake to assume that human’s dependence on nature is reduced — it takes a different form. The forces of human as an intelligence being, “recollecting himself”, about the offense with lifesupporting

Subsurface barrier verification technologies, informal report

International Nuclear Information System (INIS)

Heiser, J.H.

1994-06-01

One of the more promising remediation options available to the DOE waste management community is subsurface barriers. Some of the uses of subsurface barriers include surrounding and/or containing buried waste, as secondary confinement of underground storage tanks, to direct or contain subsurface contaminant plumes and to restrict remediation methods, such as vacuum extraction, to a limited area. To be most effective the barriers should be continuous and depending on use, have few or no breaches. A breach may be formed through numerous pathways including: discontinuous grout application, from joints between panels and from cracking due to grout curing or wet-dry cycling. The ability to verify barrier integrity is valuable to the DOE, EPA, and commercial sector and will be required to gain full public acceptance of subsurface barriers as either primary or secondary confinement at waste sites. It is recognized that no suitable method exists for the verification of an emplaced barrier's integrity. The large size and deep placement of subsurface barriers makes detection of leaks challenging. This becomes magnified if the permissible leakage from the site is low. Detection of small cracks (fractions of an inch) at depths of 100 feet or more has not been possible using existing surface geophysical techniques. Compounding the problem of locating flaws in a barrier is the fact that no placement technology can guarantee the completeness or integrity of the emplaced barrier. This report summarizes several commonly used or promising technologies that have been or may be applied to in-situ barrier continuity verification

Deep carbon storage potential of buried floodplain soils.

Science.gov (United States)

D'Elia, Amanda H; Liles, Garrett C; Viers, Joshua H; Smart, David R

2017-08-15

Soils account for the largest terrestrial pool of carbon and have the potential for even greater quantities of carbon sequestration. Typical soil carbon (C) stocks used in global carbon models only account for the upper 1 meter of soil. Previously unaccounted for deep carbon pools (>1 m) were generally considered to provide a negligible input to total C contents and represent less dynamic C pools. Here we assess deep soil C pools associated with an alluvial floodplain ecosystem transitioning from agricultural production to restoration of native vegetation. We analyzed the soil organic carbon (SOC) concentrations of 87 surface soil samples (0-15 cm) and 23 subsurface boreholes (0-3 m). We evaluated the quantitative importance of the burial process in the sequestration of subsurface C and found our subsurface soils (0-3 m) contained considerably more C than typical C stocks of 0-1 m. This deep unaccounted soil C could have considerable implications for global C accounting. We compared differences in surface soil C related to vegetation and land use history and determined that flooding restoration could promote greater C accumulation in surface soils. We conclude deep floodplain soils may store substantial quantities of C and floodplain restoration should promote active C sequestration.

Potential for Nitrogen Fixation and Nitrification in the Granite-Hosted Subsurface at Henderson Mine, CO

Science.gov (United States)

Swanner, Elizabeth D.; Templeton, Alexis S.

2011-01-01

The existence of life in the deep terrestrial subsurface is established, yet few studies have investigated the origin of nitrogen that supports deep life. Previously, 16S rRNA gene surveys cataloged a diverse microbial community in subsurface fluids draining from boreholes 3000 feet deep at Henderson Mine, CO, USA (Sahl et al., 2008). The prior characterization of the fluid chemistry and microbial community forms the basis for the further investigation here of the source of NH4+. The reported fluid chemistry included N2, NH4+ (5–112 μM), NO2− (27–48 μM), and NO3− (17–72 μM). In this study, the correlation between low NH4+ concentrations in dominantly meteoric fluids and higher NH4+ in rock-reacted fluids is used to hypothesize that NH4+ is sourced from NH4+-bearing biotite. However, biotite samples from the host rocks and ore-body minerals were analyzed by Fourier transform infrared (FTIR) microscopy and none-contained NH4+. However, the nitrogenase-encoding gene nifH was successfully amplified from DNA of the fluid sample with high NH4+, suggesting that subsurface microbes have the capability to fix N2. If so, unregulated nitrogen fixation may account for the relatively high NH4+ concentrations in the fluids. Additionally, the amoA and nxrB genes for archaeal ammonium monooxygenase and nitrite oxidoreductase, respectively, were amplified from the high NH4+ fluid DNA, while bacterial amoA genes were not. Putative nitrifying organisms are closely related to ammonium-oxidizing Crenarchaeota and nitrite-oxidizing Nitrospira detected in other subsurface sites based upon 16S rRNA sequence analysis. Thermodynamic calculations underscore the importance of NH4+ as an energy source in a subsurface nitrification pathway. These results suggest that the subsurface microbial community at Henderson is adapted to the low nutrient and energy environment by their capability of fixing nitrogen, and that fixed nitrogen may support subsurface biomass via

Biosphere 2 test module experimentation program

Science.gov (United States)

Alling, Abigail; Leigh, Linda S.; Maccallum, Taber; Alvarez-Romo, Norberto

1990-01-01

The Biosphere 2 Test Module is a facility which has the capability to do either short or long term closures: five month closures with plants were conducted. Also conducted were investigations of specific problems, such as trace gas purification by bioregenerative systems by in-putting a fixed concentration of a gas and observing its uptake over time. In other Test Module experiments, the concentration of one gas was changed to observe what effects this has on other gases present or on the system. The science of biospherics which encompasses the study of closed biological systems provides an opening into the future in space as well as in the Earth's biosphere.

Agricultural and Environmental Input Parameters for the Biosphere Model

International Nuclear Information System (INIS)

Kaylie Rasmuson; Kurt Rautenstrauch

2003-01-01

This analysis is one of nine technical reports that support the Environmental Radiation Model for Yucca Mountain Nevada (ERMYN) biosphere model. It documents input parameters for the biosphere model, and supports the use of the model to develop Biosphere Dose Conversion Factors (BDCF). The biosphere model is one of a series of process models supporting the Total System Performance Assessment (TSPA) for the repository at Yucca Mountain. The ERMYN provides the TSPA with the capability to perform dose assessments. A graphical representation of the documentation hierarchy for the ERMYN is presented in Figure 1-1. This figure shows the interrelationships between the major activities and their products (the analysis and model reports) that were planned in the biosphere Technical Work Plan (TWP, BSC 2003a). It should be noted that some documents identified in Figure 1-1 may be under development and therefore not available at the time this document is issued. The ''Biosphere Model Report'' (BSC 2003b) describes the ERMYN and its input parameters. This analysis report, ANL-MGR-MD-000006, ''Agricultural and Environmental Input Parameters for the Biosphere Model'', is one of the five reports that develop input parameters for the biosphere model. This report defines and justifies values for twelve parameters required in the biosphere model. These parameters are related to use of contaminated groundwater to grow crops. The parameter values recommended in this report are used in the soil, plant, and carbon-14 submodels of the ERMYN

Nominal Performance Biosphere Dose Conversion Factor Analysis

Energy Technology Data Exchange (ETDEWEB)

M.A. Wasiolek

2003-07-25

This analysis report is one of the technical reports containing documentation of the Environmental Radiation Model for Yucca Mountain, Nevada (ERMYN), a biosphere model supporting the Total System Performance Assessment (TSPA) for the license application (LA) for the Yucca Mountain repository. This analysis report describes the development of biosphere dose conversion factors (BDCFs) for the groundwater exposure scenario, and the development of conversion factors for assessing compliance with the groundwater protection standard. A graphical representation of the documentation hierarchy for the ERMYN is presented in Figure 1-1. This figure shows the interrelationships among the products (i.e., analysis and model reports) developed for biosphere modeling and provides an understanding of how this analysis report contributes to biosphere modeling. This report is one of two reports that develop biosphere BDCFs, which are input parameters for the TSPA model. The ''Biosphere Model Report'' (BSC 2003 [DIRS 164186]) describes in detail the ERMYN conceptual model and mathematical model. The input parameter reports (BSC 2003 [DIRS 160964]; BSC 2003 [DIRS 160965]; BSC 2003 [DIRS 160976]; BSC 2003 [DIRS 161239]; BSC 2003 [DIRS 161241]) contain detailed description of the model input parameters. This report describes biosphere model calculations and their output, the BDCFs, for the groundwater exposure scenario. The objectives of this analysis are to develop BDCFs and conversion factors for the TSPA. The BDCFs will be used in performance assessment for calculating annual doses for a given concentration of radionuclides in groundwater. The conversion factors will be used for calculating gross alpha particle activity in groundwater and the annual dose from beta- and photon-emitting radionuclides.

Soil-related Input Parameters for the Biosphere Model

International Nuclear Information System (INIS)

A. J. Smith

2003-01-01

This analysis is one of the technical reports containing documentation of the Environmental Radiation Model for Yucca Mountain Nevada (ERMYN), a biosphere model supporting the Total System Performance Assessment (TSPA) for the geologic repository at Yucca Mountain. The biosphere model is one of a series of process models supporting the Total System Performance Assessment (TSPA) for the Yucca Mountain repository. A graphical representation of the documentation hierarchy for the ERMYN biosphere model is presented in Figure 1-1. This figure shows the interrelationships among the products (i.e., analysis and model reports) developed for biosphere modeling, and the plan for development of the biosphere abstraction products for TSPA, as identified in the ''Technical Work Plan: for Biosphere Modeling and Expert Support'' (BSC 2003 [163602]). It should be noted that some documents identified in Figure 1-1 may be under development at the time this report is issued and therefore not available. This figure is included to provide an understanding of how this analysis report contributes to biosphere modeling in support of the license application, and is not intended to imply that access to the listed documents is required to understand the contents of this report. This report, ''Soil Related Input Parameters for the Biosphere Model'', is one of the five analysis reports that develop input parameters for use in the ERMYN model. This report is the source documentation for the six biosphere parameters identified in Table 1-1. ''The Biosphere Model Report'' (BSC 2003 [160699]) describes in detail the conceptual model as well as the mathematical model and its input parameters. The purpose of this analysis was to develop the biosphere model parameters needed to evaluate doses from pathways associated with the accumulation and depletion of radionuclides in the soil. These parameters support the calculation of radionuclide concentrations in soil from on-going irrigation and ash

Nominal Performance Biosphere Dose Conversion Factor Analysis

Energy Technology Data Exchange (ETDEWEB)

M. Wasiolek

2004-09-08

This analysis report is one of the technical reports containing documentation of the Environmental Radiation Model for Yucca Mountain, Nevada (ERMYN), a biosphere model supporting the Total System Performance Assessment (TSPA) for the license application (LA) for the Yucca Mountain repository. This analysis report describes the development of biosphere dose conversion factors (BDCFs) for the groundwater exposure scenario, and the development of conversion factors for assessing compliance with the groundwater protection standard. A graphical representation of the documentation hierarchy for the ERMYN is presented in Figure 1-1. This figure shows the interrelationships among the products (i.e., analysis and model reports) developed for biosphere modeling and provides an understanding of how this analysis report contributes to biosphere modeling. This report is one of two reports that develop biosphere BDCFs, which are input parameters for the TSPA-LA model. The ''Biosphere Model Report'' (BSC 2004 [DIRS 169460]) describes in detail the ERMYN conceptual model and mathematical model. The input parameter reports, shown to the right of the ''Biosphere Model Report'' in Figure 1-1, contain detailed description of the model input parameters, their development, and the relationship between the parameters and specific features events and processes (FEPs). This report describes biosphere model calculations and their output, the BDCFs, for the groundwater exposure scenario. The objectives of this analysis are to develop BDCFs for the groundwater exposure scenario for the three climate states considered in the TSPA-LA as well as conversion factors for evaluating compliance with the groundwater protection standard. The BDCFs will be used in performance assessment for calculating all-pathway annual doses for a given concentration of radionuclides in groundwater. The conversion factors will be used for calculating gross alpha particle

Nominal Performance Biosphere Dose Conversion Factor Analysis

International Nuclear Information System (INIS)

M. Wasiolek

2004-01-01

This analysis report is one of the technical reports containing documentation of the Environmental Radiation Model for Yucca Mountain, Nevada (ERMYN), a biosphere model supporting the Total System Performance Assessment (TSPA) for the license application (LA) for the Yucca Mountain repository. This analysis report describes the development of biosphere dose conversion factors (BDCFs) for the groundwater exposure scenario, and the development of conversion factors for assessing compliance with the groundwater protection standard. A graphical representation of the documentation hierarchy for the ERMYN is presented in Figure 1-1. This figure shows the interrelationships among the products (i.e., analysis and model reports) developed for biosphere modeling and provides an understanding of how this analysis report contributes to biosphere modeling. This report is one of two reports that develop biosphere BDCFs, which are input parameters for the TSPA-LA model. The ''Biosphere Model Report'' (BSC 2004 [DIRS 169460]) describes in detail the ERMYN conceptual model and mathematical model. The input parameter reports, shown to the right of the ''Biosphere Model Report'' in Figure 1-1, contain detailed description of the model input parameters, their development, and the relationship between the parameters and specific features events and processes (FEPs). This report describes biosphere model calculations and their output, the BDCFs, for the groundwater exposure scenario. The objectives of this analysis are to develop BDCFs for the groundwater exposure scenario for the three climate states considered in the TSPA-LA as well as conversion factors for evaluating compliance with the groundwater protection standard. The BDCFs will be used in performance assessment for calculating all-pathway annual doses for a given concentration of radionuclides in groundwater. The conversion factors will be used for calculating gross alpha particle activity in groundwater and the annual dose

Microbial diversity in the deep-subsurface hydrothermal aquifer feeding the giant gypsum crystal-bearing Naica mine, Mexico

Directory of Open Access Journals (Sweden)

Marie eRagon

2013-03-01

Full Text Available The Naica mine in Northern Mexico is famous for its giant gypsum crystals, which may reach up to 11 m long and contain fluid inclusions that might have captured microorganisms during their formation. These crystals formed under particularly stable geochemical conditions in cavities filled by low salinity hydrothermal water at 54-58°C. We have explored the microbial diversity associated to these deep, saline hydrothermal waters collected in the deepest (ca. 700-760 m mineshafts by amplifying, cloning and sequencing small-subunit ribosomal RNA genes using primers specific for archaea, bacteria and eukaryotes. Eukaryotes were not detectable in the samples and the prokaryotic diversity identified was very low. Two archaeal operational taxonomic units (OTUs were detected in one sample. They clustered with, respectively, basal Thaumarchaeota lineages and with a large clade of environmental sequences branching at the base of the Thermoplasmatales within the Euryarchaeota. Bacterial sequences belonged to the Candidate Division OP3, Firmicutes and the Alpha- and Beta-Proteobacteria. Most of the lineages detected appear autochthonous to the Naica system, since they had as closest representatives environmental sequences retrieved from deep sediments or the deep subsurface. In addition, the high GC content of 16S rRNA gene sequences belonging to the archaea and to some OP3 OTUs suggests that at least these lineages are thermophilic. Attempts to amplify diagnostic functional genes for methanogenesis (mcrA and sulfate reduction (dsrAB were unsuccessful, suggesting that those activities, if present, are not important in the aquifer. By contrast, genes encoding archaeal ammonium monooxygenase (AamoA were amplified, suggesting that Naica Thaumarchaeota are involved in nitrification. These organisms are likely thermophilic chemolithoautotrophs adapted to thrive in an extremely energy-limited environment.

Microbial diversity in the deep-subsurface hydrothermal aquifer feeding the giant gypsum crystal-bearing Naica Mine, Mexico

Science.gov (United States)

Ragon, Marie; Van Driessche, Alexander E. S.; García-Ruíz, Juan M.; Moreira, David; López-García, Purificación

2013-01-01

The Naica Mine in northern Mexico is famous for its giant gypsum crystals, which may reach up to 11 m long and contain fluid inclusions that might have captured microorganisms during their formation. These crystals formed under particularly stable geochemical conditions in cavities filled by low salinity hydrothermal water at 54–58°C. We have explored the microbial diversity associated to these deep, saline hydrothermal waters collected in the deepest (ca. 700–760 m) mineshafts by amplifying, cloning and sequencing small-subunit ribosomal RNA genes using primers specific for archaea, bacteria, and eukaryotes. Eukaryotes were not detectable in the samples and the prokaryotic diversity identified was very low. Two archaeal operational taxonomic units (OTUs) were detected in one sample. They clustered with, respectively, basal Thaumarchaeota lineages and with a large clade of environmental sequences branching at the base of the Thermoplasmatales within the Euryarchaeota. Bacterial sequences belonged to the Candidate Division OP3, Firmicutes and the Alpha- and Beta-proteobacteria. Most of the lineages detected appear autochthonous to the Naica system, since they had as closest representatives environmental sequences retrieved from deep sediments or the deep subsurface. In addition, the high GC content of 16S rRNA gene sequences belonging to the archaea and to some OP3 OTUs suggests that at least these lineages are thermophilic. Attempts to amplify diagnostic functional genes for methanogenesis (mcrA) and sulfate reduction (dsrAB) were unsuccessful, suggesting that those activities, if present, are not important in the aquifer. By contrast, genes encoding archaeal ammonium monooxygenase (AamoA) were amplified, suggesting that Naica Thaumarchaeota are involved in nitrification. These organisms are likely thermophilic chemolithoautotrophs adapted to thrive in an extremely energy-limited environment. PMID:23508882

Biosphere modelling for the assessment of radioactive waste repositories: the development of a common basis by the BIOMOVS II working group on reference biospheres

International Nuclear Information System (INIS)

VanDorp, F.

1996-01-01

Performance criteria for radioactive waste repositories are often expressed in terms of dose or risk. The characteristics of biosphere modelling for performance assessment are that: a) potential release occurs in the distant future, b) reliable predictions of human behaviour at the time of release are impracticable, and c) the biosphere is not considered to be a barrier. For these and other reasons, many unexplained differences have arisen in the approaches to biosphere modelling. The BIOMOVS II Working Group on Reference Biospheres has developed a) a recommended methodology for biosphere model development, b) a structured electronic list of features, events and processes (FEPs), and c) an illustrative example of the recommended methodology. The Working Group has successfully tested the Interaction Matrix (or Rock Engineering Systems, RES) approach for developing conceptual models. The BIOMOVS II Working Groups on Reference Biospheres and Complementary Studies have achieved considerable harmonisation in approaches to biosphere modelling. (author)

Inhalation Exposure Input Parameters for the Biosphere Model

Energy Technology Data Exchange (ETDEWEB)

M. A. Wasiolek

2003-09-24

This analysis is one of the nine reports that support the Environmental Radiation Model for Yucca Mountain Nevada (ERMYN) biosphere model. The ''Biosphere Model Report'' (BSC 2003a) describes in detail the conceptual model as well as the mathematical model and its input parameters. This report documents a set of input parameters for the biosphere model, and supports the use of the model to develop biosphere dose conversion factors (BDCFs). The biosphere model is one of a series of process models supporting the Total System Performance Assessment (TSPA) for a Yucca Mountain repository. This report, ''Inhalation Exposure Input Parameters for the Biosphere Model'', is one of the five reports that develop input parameters for the biosphere model. A graphical representation of the documentation hierarchy for the ERMYN is presented in Figure 1-1. This figure shows the interrelationships among the products (i.e., analysis and model reports) developed for biosphere modeling, and the plan for development of the biosphere abstraction products for TSPA, as identified in the ''Technical Work Plan: for Biosphere Modeling and Expert Support'' (BSC 2003b). It should be noted that some documents identified in Figure 1-1 may be under development at the time this report is issued and therefore not available at that time. This figure is included to provide an understanding of how this analysis report contributes to biosphere modeling in support of the license application, and is not intended to imply that access to the listed documents is required to understand the contents of this analysis report. This analysis report defines and justifies values of mass loading, which is the total mass concentration of resuspended particles (e.g., dust, ash) in a volume of air. Measurements of mass loading are used in the air submodel of ERMYN to calculate concentrations of radionuclides in air surrounding crops and concentrations in air

Characteristics of the Receptor for the Biosphere Model

Energy Technology Data Exchange (ETDEWEB)

M.A. Wasiolek

2005-04-05

This analysis report is one of a series of technical reports that document the Environmental Radiation Model for Yucca Mountain, Nevada (ERMYN), a biosphere model supporting the total system performance assessment (TSPA) for the geologic repository at Yucca Mountain. This report is one of the five biosphere reports that develop input parameter values for the biosphere model. The ''Biosphere Model Report'' (BSC 2004 [DIRS 169460]) describes the conceptual model, as well as the mathematical model and its input parameters. Figure 1-1 is a graphical representation of the documentation hierarchy for the ERMYN. This figure shows relationships among the products (i.e., scientific analyses and model reports) developed for biosphere modeling and biosphere abstraction products for TSPA, as identified in the ''Technical Work Plan for Biosphere Modeling and Expert Support'' (BSC 2005 [DIRS 172782]). The purpose of this analysis report is to define values for biosphere model parameters that are related to the dietary, lifestyle, and dosimetric characteristics of the receptor. The biosphere model, consistent with the licensing rule at 10 CFR Part 63 [DIRS 173164], uses a hypothetical person called the reasonably maximally exposed individual (RMEI) to represent the potentially exposed population. The parameters that define the RMEI are based on the behaviors and characteristics of the residents of the unincorporated town of Amargosa Valley, consistent with the requirements of 10 CFR 63.312 [DIRS 173164]. The output of this report is used as direct input in the two analyses identified in Figure 1-1 that calculate the values of biosphere dose conversion factors (BDCFs) for the groundwater and volcanic ash exposure scenarios. The parameter values developed in this report are reflected in the TSPA through the BDCFs. The analysis was performed in accordance with LP-SIII.9Q-BSC, ''Scientific Analyses'', and the technical work

Biosphere Reserve for All: Potentials for Involving Underrepresented Age Groups in the Development of a Biosphere Reserve through Intergenerational Practice.

Science.gov (United States)

Mitrofanenko, Tamara; Snajdr, Julia; Muhar, Andreas; Penker, Marianne; Schauppenlehner-Kloyber, Elisabeth

2018-05-22

Stakeholder participation is of high importance in UNESCO biosphere reserves as model regions for sustainable development; however, certain groups remain underrepresented. The paper proposes Intergenerational Practice (IP) as a means of involving youth and elderly women and explores its options and barriers, using the example of the Salzburger Lungau and Kärntner Nockberge Biosphere Reserve in Austria. Case study analysis is used involving mixed methods. The results reveal obstacles and motivations to participating in biosphere reserve implementation and intergenerational activities for the youth and the elderly women and imply that much potential for IP exists in the biosphere reserve region. The authors propose suitable solutions from the intergenerational field to overcome identified participation obstacles and suggest benefits of incorporating IP as a management tool into biosphere reserve activities. Suggestions for future research include evaluating applications of IP in the context of protected areas, testing of methods used in other contexts, and contribution to theory development.

Exchange processes at geosphere-biosphere interface. Current SKB approach and example of coupled hydrological-ecological approach

International Nuclear Information System (INIS)

Woerman, Anders

2003-09-01

The design of the repository for final disposal of spent nuclear fuel proposed by SKB is based on a multi-barrier system, in which the geosphere and biosphere are the utmost barrier surrounding the engineer barriers. This report briefly reviews the current approach taken by SKB to account for hydrological and ecological processes at the geosphere-biosphere interface (GBI) and their future plans in this area. A simple analysis was performed to shift the focus of performance assessment involving geosphere-biosphere interface modelling from the very simplistic assumption that the quaternary sediments are bypassed to one in which a more detailed model for sub-surface flows is included. This study indicated that, for many assumed ecosystem descriptions, the presence of the GBI leads to lower maximum doses to individual humans compared to a case when the GBI is neglected. This effect is due to the additional 'barrier' offered by the GBI. The main exposure pathways were assumed to occur through the food web. However, particularly the leakage on land through the stream-network and lakes can lead to higher doses due to ecosystem interaction with arable land. A scenario that gives particularly long duration of doses occurs due to land rise and with the transformation of the former bay and lake bed sediments into agricultural land. This effect is due to the significant retention or accumulation in aquatic sediment, which causes high activities to build up with time. Particularly, in combination with changing conditions in climate, humans life-style or geographic conditions (land rise, deforestation,etc.) doses to individual humans can be large

Confocal examination of subsurface cracking in ceramic materials.

Science.gov (United States)

Etman, Maged K

2009-10-01

The original ceramic surface finish and its microstructure may have an effect on crack propagation. The purpose of this study was to investigate the relation between crack propagation and ceramic microstructure following cyclic fatigue loading, and to qualitatively evaluate and quantitatively measure the surface and subsurface crack depths of three types of ceramic restorations with different microstructures using a Confocal Laser Scanning Microscope (CLSM) and Scanning Electron Microscope (SEM). Twenty (8 x 4 x 2 mm(3)) blocks of AllCeram (AC), experimental ceramic (EC, IPS e.max Press), and Sensation SL (SSL) were prepared, ten glazed and ten polished of each material. Sixty antagonist enamel specimens were made from the labial surfaces of permanent incisors. The ceramic abraders were attached to a wear machine, so that each enamel specimen presented at 45 degrees to the vertical movement of the abraders, and immersed in artificial saliva. Wear was induced for 80K cycles at 60 cycles/min with a load of 40 N and 2-mm horizontal deflection. The specimens were examined for cracks at baseline, 5K, 10K, 20K, 40K, and 80K cycles. Twenty- to 30-microm deep subsurface cracking appeared in SSL, with 8 to 10 microm in AC, and 7 microm close to the margin of the wear facets in glazed EC after 5K cycles. The EC showed no cracks with increasing wear cycles. Seventy-microm deep subsurface cracks were detected in SSL and 45 microm in AC after 80K cycles. Statistically, there was significant difference among the three materials (p 0.05) in crack depth within the same ceramic material with different surface finishes. The ceramic materials with different microstructures showed different patterns of subsurface cracking.

Biosphere modelling for the assessment of radioactive waste repositories; the development of a common basis by the BIOMOVS II reference biospheres working group

International Nuclear Information System (INIS)

Dorp, F. van; Egan, M.; Kessler, J.H.; Nilsson, S.; Pinedo, P.; Smith, G.; Torres, C.

1998-01-01

Performance criteria for radioactive waste repositories are often expressed in terms of dose or risk. The characteristics of biosphere modelling for performance assessment are that: (a) potential release occurs in the distant future, (b) reliable predictions of human behaviour at the time of release are impracticable, and (c) the biosphere is not considered to be a barrier as the geosphere and the engineered barriers. For these and other reasons, differences have arisen in the approaches to biosphere modelling for repository dose and risk assessment. The BIOMOVS II Reference Biospheres Working Group has developed (a) a recommended methodology for biosphere model development, (b) a structured list of features, events and processes (FEPs) which the model should describe, and (c) an illustrative example of the recommended methodology. The Working Group has successfully tested the Interaction Matrix (or Rock Engineering Systems, RES) approach for developing conceptual models. The BIOMOVS II Working Groups on Reference Biospheres and Complementary Studies have laid the basis for considerable harmonisation in approaches to biosphere modelling of long term radionuclide releases. (Copyright (c) 1998 Elsevier Science B.V., Amsterdam. All rights reserved.)

Soil-Related Input Parameters for the Biosphere Model

International Nuclear Information System (INIS)

Smith, A. J.

2004-01-01

This report presents one of the analyses that support the Environmental Radiation Model for Yucca Mountain Nevada (ERMYN). The ''Biosphere Model Report'' (BSC 2004 [DIRS 169460]) describes the details of the conceptual model as well as the mathematical model and the required input parameters. The biosphere model is one of a series of process models supporting the postclosure Total System Performance Assessment (TSPA) for the Yucca Mountain repository. A schematic representation of the documentation flow for the Biosphere input to TSPA is presented in Figure 1-1. This figure shows the evolutionary relationships among the products (i.e., analysis and model reports) developed for biosphere modeling, and the biosphere abstraction products for TSPA, as identified in the ''Technical Work Plan for Biosphere Modeling and Expert Support'' (TWP) (BSC 2004 [DIRS 169573]). This figure is included to provide an understanding of how this analysis report contributes to biosphere modeling in support of the license application, and is not intended to imply that access to the listed documents is required to understand the contents of this report. This report, ''Soil-Related Input Parameters for the Biosphere Model'', is one of the five analysis reports that develop input parameters for use in the ERMYN model. This report is the source documentation for the six biosphere parameters identified in Table 1-1. The purpose of this analysis was to develop the biosphere model parameters associated with the accumulation and depletion of radionuclides in the soil. These parameters support the calculation of radionuclide concentrations in soil from on-going irrigation or ash deposition and, as a direct consequence, radionuclide concentration in other environmental media that are affected by radionuclide concentrations in soil. The analysis was performed in accordance with the TWP (BSC 2004 [DIRS 169573]) where the governing procedure was defined as AP-SIII.9Q, ''Scientific Analyses''. This

Posiva biosphere assessment: Revised structure and status 2006

International Nuclear Information System (INIS)

Ikonen, A.

2006-12-01

Posiva's Safety Case is organised into a portfolio consisting of ten main component reports of which the Biosphere Assessment is one. To better facilitate the iterative assessment process by different task groups, the Biosphere Assessment is now organised into a sub-portfolio having folders for reports on specific topics: Site and evolution describes the past, present and future conditions of the surface system of the Olkiluoto site; Biosphere processes contain descriptions of processes prevailing at the site now and in future; Module Descriptions document the radionuclide transport models; Biosphere Assessment Data reports the parameter data used in the assessment with full references to their origin; Cases and variants provide mainly the simulated concentrations in the environmental media as a part of the actual assessment; Exposures of total environment draw conclusions on the dose and effect implications on the basis of the concentrations provided in Cases and variants. Finally, the biosphere assessment is consolidated in the summary report providing the needed high-level information to the main Safety Case and referring to the individual background reports for the details. In addition to the specific folders of the Biosphere Assessment Portfolio, there are also a number of overlapping issues to be considered throughout the assessment. Most important of those are the handling of the geosphere-biosphere interface and the future human activities, and the thorough knowledge quality assessment, the last of which provides tools to evaluate the overall uncertainty and consistency of and confidence to the assessment. In this report, the current strategy of modelling the different aspects of the biosphere from the site investigations to the doses is discussed, and the Biosphere Assessment Portfolio is introduced. Requirements and recommendations are given to the individual folders and/or reports to steer the extensive biosphere modelling and assessment work towards a

The Sword of Damocles and the Biosphere

OpenAIRE

Cairns, John

2011-01-01

The tale of the sword of Damocles can be used to describe the sword hanging by a thread over humankind with the damage it is doing to the present biosphere. The sixth biosphere, or the current biosphere, is experiencing a significant reduction in species caused by human-related activities. The signs of risk have markedly increased by the signs differ considerably from one are to another, and people tend do discount global change because it is unnoticeable in their local area. If humans begin...

Post-closure performance assessment treatment of the biosphere

Energy Technology Data Exchange (ETDEWEB)

Broderick, M A [UK Nirex Ltd., Harwell, Oxfordshire (United Kingdom); Egan, M J [AEA Technology, Risley, Cheshire (United Kingdom); Thorne, M C [Electrowatt, Horsham, Sussex (United Kingdom); Williams, J A [AEA Technology, Risley, Cheshire (United Kingdom)

1996-07-01

The Nirex strategy for radioactive waste disposal is based on a system of engineered and natural barriers, providing long-term isolation of the waste from those parts of the environment that are in contact with or readily available for use by humans (i.e. the biosphere). Even so, there remains the possibility that, on a timescale of thousands to tens of thousands of years, small quantities of poorly-sorbed, long-lived radionuclides may be released from the engineered disposal system, ultimately to emerge into the biosphere. Biosphere models are used in post-closure performance assessments to quantify the competing effects of dilution and accumulation processes on radionuclide concentrations in the accessible environment. Understanding biosphere processes and their time dependence is necessary not only to determine the radiological impact of possible future releases, but also to characterise the dynamics of transport in groundwater and the location, duration and extent of any such releases. Nirex is developing a new biosphere model for use in post-closure radiological assessments for the proposed Sellafield repository. A compartment modelling approach has been adopted, as in studies performed previously, but the system will be dynamic, allowing changes with time in both the properties of compartments and the transfers between compartments. The transport model considers both mass transport within the biosphere and the migration of radionuclides, thereby ensuring that a self-consistent description of the biosphere, in a spatially-extensive domain is maintained. The above approach is designed to link the assessment models used by the Nirex assessment team more closely into the Nirex biosphere research programme than has hitherto been possible with time-invariant assessment models. (author)

Post-closure performance assessment treatment of the biosphere

International Nuclear Information System (INIS)

Broderick, M.A.; Egan, M.J.; Thorne, M.C.; Williams, J.A.

1996-01-01

The Nirex strategy for radioactive waste disposal is based on a system of engineered and natural barriers, providing long-term isolation of the waste from those parts of the environment that are in contact with or readily available for use by humans (i.e. the biosphere). Even so, there remains the possibility that, on a timescale of thousands to tens of thousands of years, small quantities of poorly-sorbed, long-lived radionuclides may be released from the engineered disposal system, ultimately to emerge into the biosphere. Biosphere models are used in post-closure performance assessments to quantify the competing effects of dilution and accumulation processes on radionuclide concentrations in the accessible environment. Understanding biosphere processes and their time dependence is necessary not only to determine the radiological impact of possible future releases, but also to characterise the dynamics of transport in groundwater and the location, duration and extent of any such releases. Nirex is developing a new biosphere model for use in post-closure radiological assessments for the proposed Sellafield repository. A compartment modelling approach has been adopted, as in studies performed previously, but the system will be dynamic, allowing changes with time in both the properties of compartments and the transfers between compartments. The transport model considers both mass transport within the biosphere and the migration of radionuclides, thereby ensuring that a self-consistent description of the biosphere, in a spatially-extensive domain is maintained. The above approach is designed to link the assessment models used by the Nirex assessment team more closely into the Nirex biosphere research programme than has hitherto been possible with time-invariant assessment models. (author)

A Biosphere model for use in SITE-94

International Nuclear Information System (INIS)

Barrdahl, R.

1996-08-01

A simple biosphere model has been designed for use in the SKI Project SITE-94 related to a hypothetical repository for spent nuclear fuel on the island of Aespoe. The model provides results in terms of radiation dose per 1 Bq/year, unless otherwise indicated, and results will thus have to be scaled with actual flux of radionuclides per year entering the primary biosphere recipients. The model does not include radioactive decay as there is assumed no delay in the model system, except for where explicitly mentioned. Specifically, no radioactive transitions resulting in daughter nuclides are considered. Calculated yearly individual and population committed (50 years) radiation doses to man are expressed as mSv/h, under the assumption of a flux of one Bq/year into the primary biosphere recipient. Calculated radiation doses resulting from the present biosphere model are hypothetical, and should under no circumstances be considered as real. Neither should they be used as quantitative information for decision purposes. The biosphere model is of a rough and primitive character and its precision, relative to the real biosphere in the surroundings of Aespoe is envisaged to be several orders of magnitude. 8 refs

Agricultural and Environmental Input Parameters for the Biosphere Model

Energy Technology Data Exchange (ETDEWEB)

Kaylie Rasmuson; Kurt Rautenstrauch

2003-06-20

This analysis is one of nine technical reports that support the Environmental Radiation Model for Yucca Mountain Nevada (ERMYN) biosphere model. It documents input parameters for the biosphere model, and supports the use of the model to develop Biosphere Dose Conversion Factors (BDCF). The biosphere model is one of a series of process models supporting the Total System Performance Assessment (TSPA) for the repository at Yucca Mountain. The ERMYN provides the TSPA with the capability to perform dose assessments. A graphical representation of the documentation hierarchy for the ERMYN is presented in Figure 1-1. This figure shows the interrelationships between the major activities and their products (the analysis and model reports) that were planned in the biosphere Technical Work Plan (TWP, BSC 2003a). It should be noted that some documents identified in Figure 1-1 may be under development and therefore not available at the time this document is issued. The ''Biosphere Model Report'' (BSC 2003b) describes the ERMYN and its input parameters. This analysis report, ANL-MGR-MD-000006, ''Agricultural and Environmental Input Parameters for the Biosphere Model'', is one of the five reports that develop input parameters for the biosphere model. This report defines and justifies values for twelve parameters required in the biosphere model. These parameters are related to use of contaminated groundwater to grow crops. The parameter values recommended in this report are used in the soil, plant, and carbon-14 submodels of the ERMYN.

Causes and timing of future biosphere extinctions

Directory of Open Access Journals (Sweden)

S. Franck

2006-01-01

Full Text Available We present a minimal model for the global carbon cycle of the Earth containing the reservoirs mantle, ocean floor, continental crust, biosphere, and the kerogen, as well as the combined ocean and atmosphere reservoir. The model is specified by introducing three different types of biosphere: procaryotes, eucaryotes, and complex multicellular life. During the entire existence of the biosphere procaryotes are always present. 2 Gyr ago eucaryotic life first appears. The emergence of complex multicellular life is connected with an explosive increase in biomass and a strong decrease in Cambrian global surface temperature at about 0.54 Gyr ago. In the long-term future the three types of biosphere will die out in reverse sequence of their appearance. We show that there is no evidence for an implosion-like extinction in contrast to the Cambrian explosion. In dependence of their temperature tolerance complex multicellular life and eucaryotes become extinct in about 0.8–1.2 Gyr and 1.3–1.5 Gyr, respectively. The ultimate life span of the biosphere is defined by the extinction of procaryotes in about 1.6 Gyr.

Exploring the dark energy biosphere, 15 seconds at a time

Science.gov (United States)

Petrone, C.; Tossey, L.; Biddle, J.

2016-12-01

Science communication often suffers from numerous pitfalls including jargon, complexity, ageneral lack of (science) education of the audience, and short attention spans. With the Center for Dark EnergyBiosphere Investigations (C-DEBI), Delaware Sea Grant is expanding its collection of 15 Second Science videos, whichdeliver complex science topics, with visually stimulating footage and succinct audio. Featuring a diverse cast of scientistsand educators in front of the camera, we are expanded our reach into the public and classrooms. We're alsoexperimenting with smartphone-based virtual reality, for a more immersive experience into the deep! We will show youthe process for planning, producing, and posting our #15secondscience videos and VR segments, and how we areevaluating effectiveness.

The Upside-Down Biosphere: Evidence for the Partially Oxygenated Oceans During the Archean Eon

Science.gov (United States)

Domagal-Goldman, Shawn

2014-01-01

This is a commentary on the preceding chapter by Ohmoto et al., in which it is suggested that oxygen concentrations have been high throughout Earth history. This is a contentious suggestion at odds with the prevailing view in the field, which contends that atmospheric oxygen concentrations rose from trace levels to a few percent of modern-day levels around 2.5 b.y. ago. This comment notes that many of the data sets cited by Ohmoto et al. as evidence for a relatively oxidized environment come from deep-ocean settings. This presents a possibility to reconcile some of these data and suggestions with the overwhelming evidence for an atmosphere free of oxygen at that time. Specifically, it is possible that deep-ocean waters were relatively oxidized with respect to certain redox pairs. These deep-ocean waters would have been more oxidized than surface waters, thus representing an "upside-down biosphere," as originally proposed 25 years ago by Jim Walker.

Improving the biodegradative capacity of subsurface bacteria

International Nuclear Information System (INIS)

Romine, M.F.; Brockman, F.J.

1993-04-01

The continual release of large volumes of synthetic materials into the environment by agricultural and industrial sources over the last few decades has resulted in pollution of the subsurface environment. Cleanup has been difficult because of the relative inaccessibility of the contaminants caused by their wide dispersal in the deep subsurface, often at low concentrations and in large volumes. As a possible solution for these problems, interest in the introduction of biodegradative bacteria for in situ remediation of these sites has increased greatly in recent years (Timmis et al. 1988). Selection of biodegradative microbes to apply in such cleanup is limited to those strains that can survive among the native bacterial and predator community members at the particular pH, temperature, and moisture status of the site (Alexander, 1984). The use of microorganisms isolated from subsurface environments would be advantageous because the organisms are already adapted to the subsurface conditions. The options are further narrowed to strains that are able to degrade the contaminant rapidly, even in the presence of highly recalcitrant anthropogenic waste mixtures, and in conditions that do not require addition of further toxic compounds for the expression of the biodegradative capacity (Sayler et al. 1990). These obstacles can be overcome by placing the genes of well-characterized biodegradative enzymes under the control of promoters that can be regulated by inexpensive and nontoxic external factors and then moving the new genetic constructs into diverse groups of subsurface microbes. ne objective of this research is to test this hypothesis by comparing expression of two different toluene biodegradative enzymatic pathways from two different regulatable promoters in a variety of subsurface isolates

In situ detection of anaerobic alkane metabolites in subsurface environments

Directory of Open Access Journals (Sweden)

Lisa eGieg

2013-06-01

Full Text Available Alkanes comprise a substantial fraction of crude oil and refined fuels. As such, they are prevalent within deep subsurface fossil fuel deposits and in shallow subsurface environments such as aquifers that are contaminated with hydrocarbons. These environments are typically anaerobic, and host diverse microbial communities that can potentially use alkanes as substrates. Anaerobic alkane biodegradation has been reported to occur under nitrate-reducing, sulfate-reducing, and methanogenic conditions. Elucidating the pathways of anaerobic alkane metabolism has been of interest in order to understand how microbes can be used to remediate contaminated sites. Alkane activation primarily occurs by addition to fumarate, yielding alkylsuccinates, unique anaerobic metabolites that can be used to indicate in situ anaerobic alkane metabolism. These metabolites have been detected in hydrocarbon-contaminated shallow aquifers, offering strong evidence for intrinsic anaerobic bioremediation. Recently, studies have also revealed that alkylsuccinates are present in oil and coal seam production waters, indicating that anaerobic microbial communities can utilize alkanes in these deeper subsurface environments. In many crude oil reservoirs, the in situ anaerobic metabolism of hydrocarbons such as alkanes may be contibuting to modern-day detrimental effects such as oilfield souring, or may lead to more benefical technologies such as enhanced energy recovery from mature oilfields. In this review, we briefly describe the key metabolic pathways for anaerobic alkane (including n-alkanes, isoalkanes, and cyclic alkanes metabolism and highlight several field reports wherein alkylsuccinates have provided evidence for anaerobic in situ alkane metabolism in shallow and deep subsurface environments.

Agricultural and Environmental Input Parameters for the Biosphere Model

Energy Technology Data Exchange (ETDEWEB)

K. Rasmuson; K. Rautenstrauch

2004-09-14

This analysis is one of 10 technical reports that support the Environmental Radiation Model for Yucca Mountain Nevada (ERMYN) (i.e., the biosphere model). It documents development of agricultural and environmental input parameters for the biosphere model, and supports the use of the model to develop biosphere dose conversion factors (BDCFs). The biosphere model is one of a series of process models supporting the total system performance assessment (TSPA) for the repository at Yucca Mountain. The ERMYN provides the TSPA with the capability to perform dose assessments. A graphical representation of the documentation hierarchy for the ERMYN is presented in Figure 1-1. This figure shows the interrelationships between the major activities and their products (the analysis and model reports) that were planned in ''Technical Work Plan for Biosphere Modeling and Expert Support'' (BSC 2004 [DIRS 169573]). The ''Biosphere Model Report'' (BSC 2004 [DIRS 169460]) describes the ERMYN and its input parameters.

Agricultural and Environmental Input Parameters for the Biosphere Model

International Nuclear Information System (INIS)

K. Rasmuson; K. Rautenstrauch

2004-01-01

This analysis is one of 10 technical reports that support the Environmental Radiation Model for Yucca Mountain Nevada (ERMYN) (i.e., the biosphere model). It documents development of agricultural and environmental input parameters for the biosphere model, and supports the use of the model to develop biosphere dose conversion factors (BDCFs). The biosphere model is one of a series of process models supporting the total system performance assessment (TSPA) for the repository at Yucca Mountain. The ERMYN provides the TSPA with the capability to perform dose assessments. A graphical representation of the documentation hierarchy for the ERMYN is presented in Figure 1-1. This figure shows the interrelationships between the major activities and their products (the analysis and model reports) that were planned in ''Technical Work Plan for Biosphere Modeling and Expert Support'' (BSC 2004 [DIRS 169573]). The ''Biosphere Model Report'' (BSC 2004 [DIRS 169460]) describes the ERMYN and its input parameters

Microbial Life of North Pacific Oceanic Crust

Science.gov (United States)

Schumann, G.; Koos, R.; Manz, W.; Reitner, J.

2003-12-01

Information on the microbiology of the deep subsurface is necessary in order to understand the factors controlling the rate and extent of the microbially catalyzed reactions that influence the geophysical properties of these environments. Drilling into 45-Ma oceanic basaltic crust in a deepwater environment during ODP Leg 200 provided a promising opportunity to explore the abundance, diversity and activity of micro-organisms. The combined use of culture-independent molecular phylogenetic analyses and enrichment culture techniques is an advantageous approach in investigating subsurface microbial ecosystems. Enrichment culture methods allow the evaluation of potential activities and functions. Microbiological investigations revealed few aerobic cultivable, in part hitherto unknown, micro-organisms in deep submarine sediments and basaltic lava flows. 16S rDNA sequencing of isolates from sediment revealed the next relatives to be members of the genera Halomonas, Pseudomonas, and Lactobacillus. Within the Pseudomonadaceae the closest relative is Acinetobacter sp., which was isolated from a deep subsurface environment. The next phylogenetical relatives within the Halomonadaceae are bacteria typically isolated from Soda lakes, which are considered as model of early life conditions. Interestingly, not only sediment bacteria could be obtained in pure culture. Aerobic strains could also be successfully isolated from the massive tholeiitic basalt layer at a depth of 76.16 mbsf (46 m below the sediment/basement contact). These particular isolates are gram-positive with low G+C content of DNA, phylogenetically affiliated to the phylum Firmicutes. The closest neighbors are e.g. a marine Bacillus isolated from the Gulf of Mexico and a low G+C gram-positive bacterium, which belongs to the microbial flora in the deepest sea mud of the Mariana Trench, isolated from a depth of 10,897 m. Based on the similarity values, the isolates represent hitherto undescribed species of the deep

Mud Volcanoes - A New Class of Sites for Geological and Astrobiological Exploration of Mars

Science.gov (United States)

Allen, C.C.; Oehler, D.Z.; Baker, D.M.

2009-01-01

Mud volcanoes provide a unique low-temperature window into the Earth s subsurface - including the deep biosphere - and may prove to be significant sources of atmospheric methane. The identification of analogous features on Mars would provide an important new class of sites for geological and astrobiological exploration. We report new work suggesting that features in Acidalia Planitia are most consistent with their being mud volcanoes.

The origin, source and cycling of methane in deep crystalline rock biosphere

Directory of Open Access Journals (Sweden)

Riikka eKietäväinen

2015-07-01

Full Text Available The emerging interest in using stable bedrock formations for industrial purposes, e.g. nuclear waste disposal, has increased the need for understanding microbiological and geochemical processes in deep crystalline rock environments, including the carbon cycle. Considering the origin and evolution of life on Earth, these environments may also serve as windows to the past. Various geological, chemical and biological processes can influence the deep carbon cycle. Conditions of CH4 formation, available substrates and time scales can be drastically different from surface environments. This paper reviews the origin, source and cycling of methane in deep terrestrial crystalline bedrock with an emphasis on microbiology. In addition to potential formation pathways of CH4, microbial consumption of CH4 is also discussed. Recent studies on the origin of CH4 in continental bedrock environments have shown that the traditional separation of biotic and abiotic CH4 by the isotopic composition can be misleading in substrate-limited environments, such as the deep crystalline bedrock. Despite of similarities between Precambrian continental sites in Fennoscandia, South Africa and North America, where deep methane cycling has been studied, common physicochemical properties which could explain the variation in the amount of CH4 and presence or absence of CH4 cycling microbes were not found. However, based on their preferred carbon metabolism, methanogenic microbes appeared to have similar spatial distribution among the different sites.

The origin, source, and cycling of methane in deep crystalline rock biosphere.

Science.gov (United States)

Kietäväinen, Riikka; Purkamo, Lotta

2015-01-01

The emerging interest in using stable bedrock formations for industrial purposes, e.g., nuclear waste disposal, has increased the need for understanding microbiological and geochemical processes in deep crystalline rock environments, including the carbon cycle. Considering the origin and evolution of life on Earth, these environments may also serve as windows to the past. Various geological, chemical, and biological processes can influence the deep carbon cycle. Conditions of CH4 formation, available substrates and time scales can be drastically different from surface environments. This paper reviews the origin, source, and cycling of methane in deep terrestrial crystalline bedrock with an emphasis on microbiology. In addition to potential formation pathways of CH4, microbial consumption of CH4 is also discussed. Recent studies on the origin of CH4 in continental bedrock environments have shown that the traditional separation of biotic and abiotic CH4 by the isotopic composition can be misleading in substrate-limited environments, such as the deep crystalline bedrock. Despite of similarities between Precambrian continental sites in Fennoscandia, South Africa and North America, where deep methane cycling has been studied, common physicochemical properties which could explain the variation in the amount of CH4 and presence or absence of CH4 cycling microbes were not found. However, based on their preferred carbon metabolism, methanogenic microbes appeared to have similar spatial distribution among the different sites.

Soil-Related Input Parameters for the Biosphere Model

Energy Technology Data Exchange (ETDEWEB)

A. J. Smith

2004-09-09

This report presents one of the analyses that support the Environmental Radiation Model for Yucca Mountain Nevada (ERMYN). The ''Biosphere Model Report'' (BSC 2004 [DIRS 169460]) describes the details of the conceptual model as well as the mathematical model and the required input parameters. The biosphere model is one of a series of process models supporting the postclosure Total System Performance Assessment (TSPA) for the Yucca Mountain repository. A schematic representation of the documentation flow for the Biosphere input to TSPA is presented in Figure 1-1. This figure shows the evolutionary relationships among the products (i.e., analysis and model reports) developed for biosphere modeling, and the biosphere abstraction products for TSPA, as identified in the ''Technical Work Plan for Biosphere Modeling and Expert Support'' (TWP) (BSC 2004 [DIRS 169573]). This figure is included to provide an understanding of how this analysis report contributes to biosphere modeling in support of the license application, and is not intended to imply that access to the listed documents is required to understand the contents of this report. This report, ''Soil-Related Input Parameters for the Biosphere Model'', is one of the five analysis reports that develop input parameters for use in the ERMYN model. This report is the source documentation for the six biosphere parameters identified in Table 1-1. The purpose of this analysis was to develop the biosphere model parameters associated with the accumulation and depletion of radionuclides in the soil. These parameters support the calculation of radionuclide concentrations in soil from on-going irrigation or ash deposition and, as a direct consequence, radionuclide concentration in other environmental media that are affected by radionuclide concentrations in soil. The analysis was performed in accordance with the TWP (BSC 2004 [DIRS 169573]) where the governing procedure

Reconnecting to the biosphere.

Science.gov (United States)

Folke, Carl; Jansson, Asa; Rockström, Johan; Olsson, Per; Carpenter, Stephen R; Chapin, F Stuart; Crépin, Anne-Sophie; Daily, Gretchen; Danell, Kjell; Ebbesson, Jonas; Elmqvist, Thomas; Galaz, Victor; Moberg, Fredrik; Nilsson, Måns; Osterblom, Henrik; Ostrom, Elinor; Persson, Asa; Peterson, Garry; Polasky, Stephen; Steffen, Will; Walker, Brian; Westley, Frances

2011-11-01

Humanity has emerged as a major force in the operation of the biosphere, with a significant imprint on the Earth System, challenging social-ecological resilience. This new situation calls for a fundamental shift in perspectives, world views, and institutions. Human development and progress must be reconnected to the capacity of the biosphere and essential ecosystem services to be sustained. Governance challenges include a highly interconnected and faster world, cascading social-ecological interactions and planetary boundaries that create vulnerabilities but also opportunities for social-ecological change and transformation. Tipping points and thresholds highlight the importance of understanding and managing resilience. New modes of flexible governance are emerging. A central challenge is to reconnect these efforts to the changing preconditions for societal development as active stewards of the Earth System. We suggest that the Millennium Development Goals need to be reframed in such a planetary stewardship context combined with a call for a new social contract on global sustainability. The ongoing mind shift in human relations with Earth and its boundaries provides exciting opportunities for societal development in collaboration with the biosphere--a global sustainability agenda for humanity.

Regionally strong feedbacks between the atmosphere and terrestrial biosphere

Science.gov (United States)

Green, Julia K.; Konings, Alexandra G.; Alemohammad, Seyed Hamed; Berry, Joseph; Entekhabi, Dara; Kolassa, Jana; Lee, Jung-Eun; Gentine, Pierre

2017-06-01

The terrestrial biosphere and atmosphere interact through a series of feedback loops. Variability in terrestrial vegetation growth and phenology can modulate fluxes of water and energy to the atmosphere, and thus affect the climatic conditions that in turn regulate vegetation dynamics. Here we analyse satellite observations of solar-induced fluorescence, precipitation, and radiation using a multivariate statistical technique. We find that biosphere-atmosphere feedbacks are globally widespread and regionally strong: they explain up to 30% of precipitation and surface radiation variance in regions where feedbacks occur. Substantial biosphere-precipitation feedbacks are often found in regions that are transitional between energy and water limitation, such as semi-arid or monsoonal regions. Substantial biosphere-radiation feedbacks are often present in several moderately wet regions and in the Mediterranean, where precipitation and radiation increase vegetation growth. Enhancement of latent and sensible heat transfer from vegetation accompanies this growth, which increases boundary layer height and convection, affecting cloudiness, and consequently incident surface radiation. Enhanced evapotranspiration can increase moist convection, leading to increased precipitation. Earth system models underestimate these precipitation and radiation feedbacks mainly because they underestimate the biosphere response to radiation and water availability. We conclude that biosphere-atmosphere feedbacks cluster in specific climatic regions that help determine the net CO2 balance of the biosphere.

Improvement of geological subsurface structure models for Kanto area, Japan, based on records of microtremor array and earthquake observations

Science.gov (United States)

Wakai, A.; Senna, S.; Jin, K.; Cho, I.; Matsuyama, H.; Fujiwara, H.

2017-12-01

To estimate damage caused by strong ground motions from a large earthquake, it is important to accurately evaluate broadband ground-motion characteristics in wide area. For realizing that, it is one of the important issues to model detailed subsurface structure from top surface of seismic bedrock to ground surface.Here, we focus on Kanto area, including Tokyo, where there are thicker sedimentary layers. We, first, have ever collected deep bore-hole data, soil physical properties obtained by some geophysical explorations, geological information and existing models for deep ground from top surface of seismic bedrock to that of engineering bedrock, and have collected a great number of bore-hole data and surficial geological ones for shallow ground from top surface of engineering bedrock to ground surface. Using them, we modeled initial geological subsurface structure for each of deep ground and shallow one. By connecting them appropriately, we constructed initial geological subsurface structure models from top surface of seismic bedrock to ground surface.In this study, we first collected a lot of records obtained by dense microtremor observations and earthquake ones in the whole Kanto area. About microtremor observations, we conducted measurements from large array with the size of hundreds of meters to miniature array with the size of 60 centimeters to cover both of deep ground and shallow one. And then, using ground motion characteristics such as disperse curves and H/V(R/V) spectral ratios obtained from these records, the initial geological subsurface structure models were improved in terms of velocity structure from top surface of seismic bedrock to ground surface in the area.We will report outlines on microtremor array observations, analysis methods and improved subsurface structure models.

Two-dimensional joint inversion of Magnetotelluric and local earthquake data: Discussion on the contribution to the solution of deep subsurface structures

Science.gov (United States)

Demirci, İsmail; Dikmen, Ünal; Candansayar, M. Emin

2018-02-01

Joint inversion of data sets collected by using several geophysical exploration methods has gained importance and associated algorithms have been developed. To explore the deep subsurface structures, Magnetotelluric and local earthquake tomography algorithms are generally used individually. Due to the usage of natural resources in both methods, it is not possible to increase data quality and resolution of model parameters. For this reason, the solution of the deep structures with the individual usage of the methods cannot be fully attained. In this paper, we firstly focused on the effects of both Magnetotelluric and local earthquake data sets on the solution of deep structures and discussed the results on the basis of the resolving power of the methods. The presence of deep-focus seismic sources increase the resolution of deep structures. Moreover, conductivity distribution of relatively shallow structures can be solved with high resolution by using MT algorithm. Therefore, we developed a new joint inversion algorithm based on the cross gradient function in order to jointly invert Magnetotelluric and local earthquake data sets. In the study, we added a new regularization parameter into the second term of the parameter correction vector of Gallardo and Meju (2003). The new regularization parameter is enhancing the stability of the algorithm and controls the contribution of the cross gradient term in the solution. The results show that even in cases where resistivity and velocity boundaries are different, both methods influence each other positively. In addition, the region of common structural boundaries of the models are clearly mapped compared with original models. Furthermore, deep structures are identified satisfactorily even with using the minimum number of seismic sources. In this paper, in order to understand the future studies, we discussed joint inversion of Magnetotelluric and local earthquake data sets only in two-dimensional space. In the light of these

Dilution limits dissolved organic carbon utilization in the deep ocean

NARCIS (Netherlands)

Arrieta, J.M.; Mayol, E.; Hansman, R.L.; Herndl, G.J.; Dittmar, T.; Duarte, C.M.

2015-01-01

Oceanic dissolved organic carbon (DOC) is the second largest reservoir of organic carbon in the biosphere. About 72% of the global DOC inventory is stored in deep oceanic layers for years to centuries, supporting the current view that it consists of materials resistant to microbial degradation. An

Manipulation of natural subsurface processes: Field research and validation. Interim report

International Nuclear Information System (INIS)

Fruchter, J.S.; Spane, F.A.; Amonette, J.E.

1994-11-01

Often the only alternative for treating deep subsurface contamination is in situ manipulation of natural processes to change the mobility or form of contaminants. However, the complex interactions of natural subsurface physical, chemical, and microbial processes limit the predictability of the system-wide impact of manipulation based on current knowledge. This report is a summary of research conducted to examine the feasibility of controlling the oxidation-reduction (redox) potential of the unconfined aquifer at the Hanford Site in southeastern Washington State by introducing chemical reagents and microbial nutrients. The experiment would allow the testing of concepts and hypotheses developed from fundamental research in the US Department of Energy's (DOE's) Subsurface Science Program. Furthermore, the achievement of such control is expected to have implications for in situ remediation of dispersed aqueous contaminants in the subsurface environment at DOE sites nationwide, and particularly at the Hanford Site. This interim report summarizes initial research that was conducted between July 1990 and October 1991

Database description for the biosphere code BIOMOD

International Nuclear Information System (INIS)

Kane, P.; Thorne, M.C.; Coughtrey, P.J.

1983-03-01

The development of a biosphere model for use in comparative radiological assessments of UK low and intermediate level waste repositories is discussed. The nature, content and sources of data contained in the four files that comprise the database for the biosphere code BIOMOD are described. (author)

Taking account of the biosphere in HLW assessment

International Nuclear Information System (INIS)

Smith, G.M.; Grogan, H.A.

1992-01-01

Evaluation of the biosphere in High level Waste assessment is beset with difficulties concerned with the disparity in timescales for geosphere and biosphere processes and prediction of the long term conditions in the biosphere. These issues are discussed against the background of developments on criteria, calculational end points, timescales, environmental change and human activities, relationship to other parts of the assessment, and uncertainty and variability. In this paper an outline for a surface environment assessment program is proposed

Integrated Biosphere Simulator Model (IBIS), Version 2.5

Data.gov (United States)

National Aeronautics and Space Administration — The Integrated Biosphere Simulator (or IBIS) is designed to be a comprehensive model of the terrestrial biosphere. Tthe model represents a wide range of processes,...

Integrated Biosphere Simulator Model (IBIS), Version 2.5

Data.gov (United States)

National Aeronautics and Space Administration — ABSTRACT: The Integrated Biosphere Simulator (or IBIS) is designed to be a comprehensive model of the terrestrial biosphere. Tthe model represents a wide range of...

Mineralogy of Surface Serpentinite Outcrops in the Coast Range Ophiolite: Implications for the Deep Biosphere and Astrobiology

Science.gov (United States)

Mccann, A. R.; Cardace, D.; Carnevale, D.; Ehlmann, B. L.

2011-12-01

California contains a number of ultramafic (Fe- and Mg rich) rock bodies, including the Coast Range Ophiolite, a block of oceanic crust and upper mantle tectonically emplaced onto land. These ultramafic rocks are primarily composed of olivine and pyroxene, both of which are stable at the high temperatures and pressures in the deep subsurface where they crystallize but become unstable at low temperature and low pressure conditions near the surface. They are highly reduced rocks, creating chemical disequilibria, which can theoretically provide energy to chemoautotrophic organisms. Serpentinization (serpentine-forming) reactions between the rocks and water produce hydrogen molecules, which can be metabolized by diverse organisms. Earth and Mars have shown evidence of similar early geologic histories, possibly with widespread reducing habitable environments (Schulte et al., 2006). Recent data from the Compact Reconnaissance Imaging Spectrometer for Mars (CRISM) have shown serpentine-bearing outcrops near Nili Fossae (21 N, 282 W) and elsewhere in Mars' cratered highlands. Serpentine-bearing outcrops are rare, but their presence confirms that such systems involving the aqueous alteration of ultramafic rocks were active in the past (specifically during the Noachian epoch (older than ~3.7 billion years), possibly producing aqueous habitats suitable for chemoautotrophic life (Ehlmann et al., 2010). Remotely sensed data cannot confirm whether there is active serpentinization on Mars, however exposed, presently serpentinizing ultramafics in terrestrial ophiolites such as those of the California Coast Range provide points of comparison for similar Martian rocks. Volume expansion during serpentinization fractures the host rock, exposing new reaction surfaces, allowing further serpentinization. If subsurface liquid water is present on Mars, serpentinization may still be occurring. We will provide x-ray diffraction and petrographic data for surface serpentinites from the Coast

WATSON: Detecting organic material in subsurface ice using deep-UV fluorescence and Raman spectroscopy

Science.gov (United States)

Eshelman, E.; Wanger, G.; Manatt, K.; Malaska, M.; Willis, M.; Abbey, W.; Doloboff, I.; Beegle, L. W.; DeFlores, L. P.; Priscu, J. C.; Lane, A. L.; Carrier, B. L.; Mellerowicz, B.; Kim, D.; Paulsen, G.; Zacny, K.; Bhartia, R.

2017-12-01

Future astrobiological missions to Europa and other ocean worlds may benefit from next-generation instrumentation capable of in situ organic and life detection in subsurface ice environments. WATSON (Wireline Analysis Tool for in Situ Observation of Northern ice sheets) is an instrument under development at NASA's Jet Propulsion Laboratory. WATSON contains high-TRL instrumentation developed for SHERLOC, the Mars 2020 deep-UV fluorescence and Raman spectrometer, including a 248.6 nm NeCu hollow cathode laser as an excitation source. In WATSON, these technologies provide spectroscopic capabilities highly sensitive to many organic compounds, including microbes, in an instrument package approximately 1.2 m long with a 101.6 mm diameter, designed to accommodate a 108 mm ice borehole. Interrogation into the ice wall with a laser allows for a non-destructive in situ measurement that preserves the spatial distribution of material within the ice. We report on a successful deployment of WATSON to Kangerlussuaq, Greenland, where the instrument was lowered to a 4.5 m depth in a hand-cored hole on the Kangerlussuaq sector of the Greenland ice sheet. Motorized stages within the instrument were used to raster a laser across cm-scale regions of the interior surface of the borehole, obtaining fluorescence spectral maps with a 200 µm spatial resolution and a spectral range from 265 nm to 440 nm. This region includes the UV emission bands of many aromatic compounds and microbes, and includes the water and ice Raman O-H stretching modes. We additionally report on experiments designed to inform an early-2018 deployment to Kangerlussuaq where WATSON will be incorporated into a Honeybee Robotics planetary deep drill, with a goal of drilling to a depth of 100 m and investigating the distribution of organic material within the ice sheet. These experiments include laboratory calibrations to determine the sensitivity to organic compounds embedded in ice at various depths, as well as

Biosphere models for safety assesment of radioactive waste disposal

Energy Technology Data Exchange (ETDEWEB)

Proehl, G; Olyslaegers, G; Zeevaert, T [SCK/CEN, Mol (Belgium); Kanyar, B [University of Veszprem (Hungary). Dept. of Radiochemistry; Pinedo, P; Simon, I [Centro de Investigaciones Energeticas Medioambientales y Tecnologicas (CIEMAT), Madrid (Spain); Bergstroem, U; Hallberg, B [Studsvik Ecosafe, Nykoeping (Sweden); Mobbs, S; Chen, Q; Kowe, R [NRPB, Chilton, Didcot (United Kingdom)

2004-07-01

The aim of the BioMoSA project has been to contribute in the confidence building of biosphere models, for application in performance assessments of radioactive waste disposal. The detailed objectives of this project are: development and test of practical biosphere models for application in long-term safety studies of radioactive waste disposal to different European locations, identification of features, events and processes that need to be modelled on a site-specific rather than on a generic base, comparison of the results and quantification of the variability of site-specific models developed according to the reference biosphere methodology, development of a generic biosphere tool for application in long term safety studies, comparison of results from site-specific models to those from generic one, Identification of possibilities and limitations for the application of the generic biosphere model. (orig.)

Biosphere models for safety assessment of radioactive waste disposal

International Nuclear Information System (INIS)

Proehl, G.; Olyslaegers, G.; Zeevaert, T.; Kanyar, B.; Bergstroem, U.; Hallberg, B.; Mobbs, S.; Chen, Q.; Kowe, R.

2004-01-01

The aim of the BioMoSA project has been to contribute in the confidence building of biosphere models, for application in performance assessments of radioactive waste disposal. The detailed objectives of this project are: development and test of practical biosphere models for application in long-term safety studies of radioactive waste disposal to different European locations, identification of features, events and processes that need to be modelled on a site-specific rather than on a generic base, comparison of the results and quantification of the variability of site-specific models developed according to the reference biosphere methodology, development of a generic biosphere tool for application in long term safety studies, comparison of results from site-specific models to those from generic one, Identification of possibilities and limitations for the application of the generic biosphere model. (orig.)

Exchange processes at geosphere-biosphere interface. Current SKB approach and example of coupled hydrological-ecological approach

Energy Technology Data Exchange (ETDEWEB)

Woerman, Anders [Swedish Univ. of Agricultural Sciences, Uppsala (Sweden). Dept. of Biometry and Technology

2003-09-01

The design of the repository for final disposal of spent nuclear fuel proposed by SKB is based on a multi-barrier system, in which the geosphere and biosphere are the utmost barrier surrounding the engineer barriers. This report briefly reviews the current approach taken by SKB to account for hydrological and ecological processes at the geosphere-biosphere interface (GBI) and their future plans in this area. A simple analysis was performed to shift the focus of performance assessment involving geosphere-biosphere interface modelling from the very simplistic assumption that the quaternary sediments are bypassed to one in which a more detailed model for sub-surface flows is included. This study indicated that, for many assumed ecosystem descriptions, the presence of the GBI leads to lower maximum doses to individual humans compared to a case when the GBI is neglected. This effect is due to the additional 'barrier' offered by the GBI. The main exposure pathways were assumed to occur through the food web. However, particularly the leakage on land through the stream-network and lakes can lead to higher doses due to ecosystem interaction with arable land. A scenario that gives particularly long duration of doses occurs due to land rise and with the transformation of the former bay and lake bed sediments into agricultural land. This effect is due to the significant retention or accumulation in aquatic sediment, which causes high activities to build up with time. Particularly, in combination with changing conditions in climate, humans life-style or geographic conditions (land rise, deforestation,etc.) doses to individual humans can be large.

A deep gold mine metagenome as a source of novel esterases ...

African Journals Online (AJOL)

New sources of enzymes for biotechnological applications are continually being sought for. While diverse microbial ecosysyems have been demonstrated in the deep subsurfaces, deep mines provide easy access to these specialist communities. Therefore, the aim of this study was to assess a deep mine biofilm as a source ...

Past and Future of the Anthropogenic Biosphere

Science.gov (United States)

Ellis, E. C.

2010-12-01

Human populations and their use of land have now transformed most of the terrestrial biosphere into anthropogenic biomes (anthromes). As anthromes have emerged as the dominant global forms of ecological pattern and process, human interactions with terrestrial ecosystems have become a key earth system process, determining the structure and functioning of the biosphere. This presentation explores Ester Boserup’s land use intensification theories as models for understanding the emergence and dynamics of anthromes and their ecological processes, including their biogeochemistry and community structure, from the mostly wild biosphere of the Holocene to the primarily anthropogenic biosphere of the present and future. Existing global models and data for human population growth and land use over the Holocene differ in their portrayal of the global transition to a mostly anthropogenic biosphere. Yet there is little doubt that human populations have continued to grow over the long term and that anthromes have been increasingly important global ecological systems for millennia. This is conclusive evidence that human interactions with ecosystems can be sustained over the long-term, albeit under conditions that may no longer be realizable by either Earth or human systems. The classic Malthusian paradigm, in which human population growth outstrips natural resources leading to population collapse is unsupported by historical observations at global scale. Boserupian intensification is the better model, providing a robust theoretical foundation in which socio-ecological systems evolve as human populations increase, towards increasingly efficient use of limiting natural resources and enhanced production of anthropogenic ecological services such as food. This is not a story of technical advance, but rather of the forced adoption of ever more energy-intensive technical solutions in support of ever increasing population demands. And it does explain historical changes in the biosphere

Evaluation of Features, Events, and Processes (FEP) for the Biosphere Model

Energy Technology Data Exchange (ETDEWEB)

M. Wasiolek; P. Rogers

2004-10-27

The purpose of this analysis report is to evaluate and document the inclusion or exclusion of biosphere features, events, and processes (FEPs) with respect to modeling used to support the total system performance assessment (TSPA) for the license application (LA). A screening decision, either ''Included'' or ''Excluded'', is given for each FEP along with the corresponding technical basis for the excluded FEPs and the descriptions of how the included FEPs were incorporated in the biosphere model. This information is required by the U.S. Nuclear Regulatory Commission (NRC) regulations at 10 CFR 63.114 (d, e, and f) [DIRS 156605]. The FEPs addressed in this report concern characteristics of the reference biosphere, the receptor, and the environmental transport and receptor exposure pathways for the groundwater and volcanic ash exposure scenarios considered in biosphere modeling. This revision provides the summary of the implementation of included FEPs in TSPA-LA, (i.e., how the FEP is included); for excluded FEPs, this analysis provides the technical basis for exclusion from TSPA-LA (i.e., why the FEP is excluded). This report is one of the 10 documents constituting the biosphere model documentation suite. A graphical representation of the documentation hierarchy for the biosphere model is presented in Figure 1-1. This figure shows the interrelationships among the products (i.e., analysis and model reports) developed for biosphere modeling. The ''Biosphere Model Report'' describes in detail the biosphere conceptual model and mathematical model. The input parameter reports shown to the right of the ''Biosphere Model Report'' contain detailed descriptions of the model input parameters and their development. Outputs from these six reports are used in the ''Nominal Performance Biosphere Dose Conversion Factor Analysis and Disruptive Event Biosphere Dose Conversion Factor Analysis

Surface Modification and Surface - Subsurface Exchange Processes on Europa

Science.gov (United States)

Phillips, C. B.; Molaro, J.; Hand, K. P.

2017-12-01

and volume of transported material will yield insight on whether such a process may provide fuel to sustain a biosphere in Europa's subsurface ocean, which is relevant to searches for life by a future mission such as a potential Europa Lander.

Microbial stowaways: Addressing oil spill impacts and the artificial reef effect on deep-sea microbiomes

Science.gov (United States)

Hamdan, L. J.; Salerno, J. L.; Blackwell, C. A.; Little, B.; McGown, C.; Fitzgerald, L. A.; Damour, M.

2016-02-01

Shipwrecks enhance macro-biological diversity in the deep ocean, but, to date, studies have not explored the reef effect on deep-sea microbiological diversity. This is an important concept to address in a restoration framework, as microbial biogeochemical function impacts recruitment and adhesion of higher trophic levels on artificial reefs. In addition, microbial biofilms influence the preservation of shipwrecks through biologically mediated corrosion. Oil and gas-related activities have potential to disrupt the base of the reef trophic web; therefore, bacterial diversity and gene function at six shipwrecks (3 steel-hulled; 3 wood-hulled) in the northern Gulf of Mexico was investigated as part of the GOM-SCHEMA (Shipwreck Corrosion, Hydrocarbon Exposure, Microbiology, and Archaeology) project. Sites were selected based on proximity to the Deepwater Horizon spill's subsurface plume, depth, hull type, and existing archaeological data. Classification of taxa in sediments adjacent to and at distance from wrecks, in water, and on experimental steel coupons was used to evaluate how the presence of shipwrecks and spill contaminants in the deep biosphere influenced diversity. At all sites, and in all sample types, Proteobacteria were most abundant. Biodiversity was highest in surface sediments and in coupon biofilms adjacent to two steel-hulled wrecks in the study (Halo and Anona) and decreased with sediment depth and distance from the wrecks. Sequences associated with the iron oxidizing Mariprofundus genus were elevated at steel-hulled sites, indicating wreck-specific environmental selection. Despite evidence of the reef effect on microbiomes, bacterial composition was structured primarily by proximity to the spill and secondarily by hull material at all sites. This study provides the first evidence of an artificial reef effect on deep-sea microbial communities and suggests that biodiversity and function of primary colonizers of shipwrecks may be impacted by the spill.

10 CFR 63.305 - Required characteristics of the reference biosphere.

Science.gov (United States)

2010-01-01

... 10 Energy 2 2010-01-01 2010-01-01 false Required characteristics of the reference biosphere. 63... Standards § 63.305 Required characteristics of the reference biosphere. (a) Features, events, and processes that describe the reference biosphere must be consistent with present knowledge of the conditions in...

The Biosphere as a Living System. On Peculiarities of the Evolutionary Process on the Biosphere Level

OpenAIRE

Alexej Yablokov; Vladimir Levchenko; Anatolij Kerzhentsev

2016-01-01

The main purpose of this second essay the “biospherology” is to streamline and formalize the existing knowledge about the biosphere, to develop the theoretical basis of the theory of evolution of the biosphere. Despite the vast amount of research on ways of origin and development of life, yet there is no generally accepted theory of evolution of life on Earth, which would not only contain the phenomenology of this process, but also an understanding of the mechanism of functioning of the biosp...

Dose assessment considering evolution of the biosphere

International Nuclear Information System (INIS)

Karlsson, Sara; Bergstroem, Ulla

2002-01-01

Swedish Nuclear Fuel and Waste Management AB (SKB) is presently updating the safety assessment for SFR (Final repository for radioactive operational waste) in Sweden. The bio-spheric part of the analysis is performed by Studsvik Eco and Safety AB. According to the regulations the safety of the repository has to be accounted for different possible courses of the development of the biosphere. A number of studies have been carried out during the past years to investigate and document the biosphere in the area surrounding the repository. Modelling of shore-level displacement by land uplift, coastal water exchange and sedimentation have provided data for prediction of the evolution of the area. The prediction is done without considering a future change in climatic conditions. The results from this study show that accumulation of radionuclides in sediments is an important process to simulate when performing dose assessments covering biosphere evolution. The dose calculated for the first years of the period with agricultural use of the contaminated sediments may be severely underestimated in a scenario with large accumulation in coastal and lake stages. (LN)

Reviewing Biosphere Reserves globally: effective conservation action or bureaucratic label?

Science.gov (United States)

Coetzer, Kaera L; Witkowski, Edward T F; Erasmus, Barend F N

2014-02-01

The Biosphere Reserve (BR) model of UNESCO's Man and the Biosphere Programme reflects a shift towards more accountable conservation. Biosphere Reserves attempt to reconcile environmental protection with sustainable development; they explicitly acknowledge humans, and human interests in the conservation landscape while still maintaining the ecological values of existing protected areas. Conceptually, this model is attractive, with 610 sites currently designated globally. Yet the practical reality of implementing dual 'conservation' and 'development' goals is challenging, with few examples successfully conforming to the model's full criteria. Here, we review the history of Biosphere Reserves from first inception in 1974 to the current status quo, and examine the suitability of the designation as an effective conservation model. We track the spatial expansion of Biosphere Reserves globally, assessing the influence of the Statutory Framework of the World Network of Biosphere Reserves and Seville strategy in 1995, when the BR concept refocused its core objectives on sustainable development. We use a comprehensive range of case studies to discuss conformity to the Programme, the social and ecological consequences associated with implementation of the designation, and challenges in aligning conservation and development. Given that the 'Biosphere Reserve' label is a relatively unknown designation in the public arena, this review also provides details on popularising the Biosphere Reserve brand, as well as prospects for further research, currently unexploited, but implicit in the designation. © 2013 The Authors. Biological Reviews © 2013 Cambridge Philosophical Society.

Biospheric Life Support - integrating biological regeneration into protection of humans in space.

Science.gov (United States)

Rocha, Mauricio; Iha, Koshun

2016-07-01

retirement (2016). The extension will allow partner agencies to deploy new experiments there, resuming basic research focusing more forward-looking goals. For deep-space, since consumables logistics becomes more difficult- and habitability an issue, with diminishing Earth's view, further research has been recommended. Four major areas have been identified for human protection: (1) radiation mitigation; (2) highly recyclable bio-regenerative (BR) LSS; (3) micro-gravity countermeasures- including artificial gravity (AG), and (4) psychological safety. To contribute to the efforts to address these issues, a basic lab/virtual iterative research has been proposed, assuming (in a worst case scenario) that: I) It won't be possible to send people to long deep space missions, safely, with the current (low quality of life) support technology (ISS micro-gravity 'up-gradings'); II) The alternative to implant a Mars surface human supportive biosphere would also not be possible, due to environmental/ evolutionary restraints (life could adapt and survive, but not necessarily to favor humans). From the above considerations arises the question: Would an average approach be possible where, by applying the artificial gravity concept to S/Cs, a fragment of Earth bio-regenerative environment could be integrated inside reusable manned vehicles- thus enhancing its habitability/autonomy in long deep space missions? For this research question a provisory answer/hypothesis has been provided. And to test it, a small AG+BR bench simulator (plus computer methods) has been devised.

Hydrologic Monitoring in the Deep Subsurface to Support Repository Performance

Science.gov (United States)

Hubbell, J. M.; Heath, G. L.; Scott, C. L.

2007-12-01

The INL has installed and operated several vadose and ground water monitoring systems in arid and humid sites to depths of about 200m. Some of these systems have been in continuous operation for over 12 years. It is important that the systems be physically robust, simple, yet versatile enough that it can operate for extended time periods with little or no maintenance. Monitoring instruments are frequently installed and run to characterize the site, collect data during site operation, and continue to run for long-term stewardship, necessitating sensors that can be maintained or serviced. Sensors are carefully chosen based on the perceived data requirements over the life of the site. An emphasis is given on direct measurements such as tensiometers (portable and advanced), neutron probe, drain gauge, temperature, wells or sampling for fluids and gases. Other complementary data can include using TDR/capacitance, radiation detectors, and larger scale geophysical techniques (3-d resistivity and EM) for volumetric measurements. Commercially available instruments may have to be modified for their use at greater depths, to allow multiple instruments in a single borehole or to perform the intended monitoring function. Access tubes (some open at the bottom) can be placed to allow insertion of multiple sensors (radiation, neutron and portable sensors/samplers), future drilling/sampling and to install new instruments at a later time. The installation techniques and backfill materials must be chosen and the measurement technique tested to ensure representative data collection for the parameters of interest. The data collection system can be linked to climatic data (precipitation, barometric pressure, snow depth, runoff, surface water sources) that may influence the site's subsurface hydrology. The instruments are then connected to a real-time automated data collection system that collect, stores, and provides access to the data. These systems have been developed that allow easy

A simplified biosphere model for global climate studies

Science.gov (United States)

Xue, Y.; Sellers, P. J.; Kinter, J. L.; Shukla, J.

1991-01-01

A comprehensive analysis of the simple biosphere model (SIB) of Sellers et al. (1986) is performed in an effort to bridge the gap between the typical hydrological treatment of the land surface biosphere and the conventional general circulation model treatment, which is specified through a single parameter. Approximations are developed that stimulate the effects of reduced soil moisture more simply, maintaining the essence of the biophysical concepts utilized in SIB. Comparing the reduced parameter biosphere with those from the original formulation in a GCM and a zero-dimensional model shows the simplified version to reproduce the original results quite closely.

Demonstration of DECOS: representation of four biosphere states

International Nuclear Information System (INIS)

Ashton, J.

1988-09-01

This report describes the use of the dynamic biosphere code, DECOS, in stand alone mode, to represent a site in four possible biosphere states. The biosphere states have been chosen to illustrate a range of conditions which may prevail at the site. The behaviour of the system in each state has been considered and the capability of DECOS to switch between the states has been demonstrated. The intention of this work is to test the function of DECOS. Results in this report are illustrative and do not form any part of a radiological assessment of the site. (author)

Deep Ground Penetrating Radar (GPR) WIPL-D Models of Buried Sub-Surface Radiators

National Research Council Canada - National Science Library

Norgard, John D; Wicks, Michael C; Musselman, Randy L

2005-01-01

.... A new Ground Penetrating Radar (GPR) concept is proposed in this paper to use subsurface radiators, delivered as earth penetrating non-explosive, electronic e-bombs, as the source of strong radiated transmissions for GPR experiments...

Posiva's Strategy for Biosphere Studies

International Nuclear Information System (INIS)

Hautojaervi, Aimo; Vieno, Timo

2002-01-01

Aimo Hautojaervi (Posiva, Finland) explained that Posiva follows the regulation from authorities that will be published soon on the STUK Web site in an English version. As an example, he said that a dose constraint of 0.1 mSv/a must be considered for several thousand years and release rate constraint for the long term. The values for these constraints were given by STUK and Posiva needs to demonstrate compliance. Posiva welcomes the regulator's clear requirements and guidance in the field of biosphere analyses. Moreover, Aimo Hautojaervi presented the planned future work that will be carried out by Posiva. As well as carrying out biosphere modelling for potential recipients at Olkiluoto, Posiva will conduct biosphere analyses for wells, lakes, seas, etc., and further evaluate human actions and develop biosphere models in close cooperation with SKB. Posiva is also actively seeking international cooperation in these new researches fields, for example within IAEA. Two potentially problematic radionuclides were also mentioned: C-14 and Radon plus decay products. These two radionuclides will be studied in depth in the future Posiva research and development programme

Biosphere: problems and solutions

Energy Technology Data Exchange (ETDEWEB)

Veziroglu, T.N. (ed.)

1984-01-01

This volume contains a large number of typescript papers from a symposium on the Biosphere, held in Miami Beach in 1984. The topics range from chemical landfills to space debris, with many aspects of chemistry throughout.

Biosphere reserves in action: Case studies of the American experience

Energy Technology Data Exchange (ETDEWEB)

None

1995-06-26

For nearly 20 years, biosphere reserves have offered a unique framework for building the knowledge, skills, and attitudes required for conservation and sustainable use of ecosystems. The 12 case studies in this volume chronicle many of the cooperative efforts to implement the biosphere reserve concept in the United States. Considered together, these efforts involve more than 20 types of protected areas, and the participation of all levels of government, and many private organizations, academic institutions, citizens groups, and individuals. Biosphere reserves are multi-purpose areas that are nominated by the national committee of the Man and the Biosphere Program (MAB) and designated by the United Nations Educational, Scientific and Cultural Organization (UNESCO) to serve as demonstration areas for cooperation in building harmonious relationships between human activities and the conservation of ecosystems and biological diversity. Each biosphere reserve exemplifies the characteristic ecosystems of one of the worlds biogeographical regions. It is a land or coas%arine area involving human communities as integral components and including resources managed for objectives ranging from complete protection to intensive, yet sustainable development. A biosphere reserve is envisioned as a regional ''landscape for learning'' in which monitoring, research, education, and training are encouraged to support sustainable conservation of natural and managed ecosystems. It is a framework for regional cooperation involving government decisionmakers, scientists, resource managers, private organizations and local people (i.e., the biosphere reserve ''stakeholders''). Finally, each biosphere reserve is part of a global network for sharing information and experience to help address complex problems of conservation and development. The 12 case studies presented in this report represent only a few of the possible evolutions of a biosphere reserve in

Components, processes and interactions in the biosphere

Energy Technology Data Exchange (ETDEWEB)

2010-12-15

This report describes the processes and interactions between components in the biosphere that may be important in a safety assessment for radioactive waste disposal. The processes are general, i.e. they can be used in all safety analyses for underground repositories and are not specific to a particular method or location. Processes related to the geosphere and specific repository types (e.g. the KBS-3 method) can be found in /Skagius et al. 1995, SKB 2001, 2006, 2010a/. This report describes a biosphere interaction matrix that has been used in support of SR-Site and that can be used in future safety assessments. The work of defining and characterising processes in the biosphere is ongoing and many persons from different disciplines have been involved in the identification and characterisation of processes

Components, processes and interactions in the biosphere

International Nuclear Information System (INIS)

2010-12-01

This report describes the processes and interactions between components in the biosphere that may be important in a safety assessment for radioactive waste disposal. The processes are general, i.e. they can be used in all safety analyses for underground repositories and are not specific to a particular method or location. Processes related to the geosphere and specific repository types (e.g. the KBS-3 method) can be found in /Skagius et al. 1995, SKB 2001, 2006, 2010a/. This report describes a biosphere interaction matrix that has been used in support of SR-Site and that can be used in future safety assessments. The work of defining and characterising processes in the biosphere is ongoing and many persons from different disciplines have been involved in the identification and characterisation of processes

Enamel subsurface damage due to tooth preparation with diamonds.

Science.gov (United States)

Xu, H H; Kelly, J R; Jahanmir, S; Thompson, V P; Rekow, E D

1997-10-01

In clinical tooth preparation with diamond burs, sharp diamond particles indent and scratch the enamel, causing material removal. Such operations may produce subsurface damage in enamel. However, little information is available on the mechanisms and the extent of subsurface damage in enamel produced during clinical tooth preparation. The aim of this study, therefore, was to investigate the mechanisms of subsurface damage produced in enamel during tooth preparation by means of diamond burs, and to examine the dependence of such damage on enamel rod orientation, diamond particle size, and removal rate. Subsurface damage was evaluated by a bonded-interface technique. Tooth preparation was carried out on two enamel rod orientations, with four clinical diamond burs (coarse, medium, fine, and superfine) used in a dental handpiece. The results of this study showed that subsurface damage in enamel took the form of median-type cracks and distributed microcracks, extending preferentially along the boundaries between the enamel rods. Microcracks within individual enamel rods were also observed. The median-type cracks were significantly longer in the direction parallel to the enamel rods than perpendicular to the rods. Preparation with the coarse diamond bur produced cracks as deep as 84 +/- 30 microns in enamel. Finishing with fine diamond burs was effective in crack removal. The crack lengths in enamel were not significantly different when the removal rate was varied. Based on these results, it is concluded that subsurface damage in enamel induced by tooth preparation takes the form of median-type cracks as well as inter- and intra-rod microcracks, and that the lengths of these cracks are sensitive to diamond particle size and enamel rod orientation, but insensitive to removal rate.

'Reference Biospheres' for solid radioactive waste disposal. Report of BIOMASS Theme 1 of the BIOsphere Modelling and ASSessment (BIOMASS) Programme. Part of the IAEA Co-ordinated Research Project on Biosphere Modelling and Assessment (BIOMASS)

Energy Technology Data Exchange (ETDEWEB)

NONE

2003-07-01

The IAEA Programme on BIOsphere Modelling and ASSessment (BIOMASS) was launched in Vienna in October 1996. The programme was concerned with developing and improving capabilities to predict the transfer of radionuclides in the environment. The programme had three themes: Theme 1: Radioactive Waste Disposal. The objective was to develop the concept of a standard or reference biosphere for application to the assessment of the long-term safety of repositories for radioactive waste. Under the general heading of 'Reference Biospheres', six Task Groups were established: Task Group 1: Principles for the Definition of Critical and Other Exposure Groups. Task Group 2: Principles for the Application of Data to Assessment Models. Task Group 3: Consideration of Alternative Assessment Contexts. Task Group 4: Biosphere System Identification and Justification. Task Group 5: Biosphere System Descriptions. Task Group 6: Model Development. Theme 2: Environmental Releases. BIOMASS provided an international forum for activities aimed at increasing the confidence in methods and models for the assessment of radiation exposure related to environmental releases. Two Working Groups addressed issues concerned with the reconstruction of radiation doses received by people from past releases of radionuclides to the environment and the evaluation of the efficacy of remedial measures. Theme 3: Biosphere Processes. The aim of this Theme was to improve capabilities for modelling the transfer of radionuclides in particular parts of the biosphere identified as being of potential radiological significance and where there were gaps in modelling approaches. This topic was explored using a range of methods including reviews of the literature, model inter-comparison exercises and, where possible, model testing against independent sources of data. Three Working Groups were established to examine the modelling of: (1) long term tritium dispersion in the environment; (2) radionuclide uptake by fruits; and (3

The biosphere rules.

Science.gov (United States)

Unruh, Gregory C

2008-02-01

Sustainability, defined by natural scientists as the capacity of healthy ecosystems to function indefinitely, has become a clarion call for business. Leading companies have taken high-profile steps toward achieving it: Wal-Mart, for example, with its efforts to reduce packaging waste, and Nike, which has removed toxic chemicals from its shoes. But, says Unruh, the director of Thunderbird's Lincoln Center for Ethics in Global Management, sustainability is more than an endless journey of incremental steps. It is a destination, for which the biosphere of planet Earth--refined through billions of years of trial and error--is a perfect model. Unruh distills some lessons from the biosphere into three rules: Use a parsimonious palette. Managers can rethink their sourcing strategies and dramatically simplify the number and types of materials their companies use in production, making recycling cost-effective. After the furniture manufacturer Herman Miller discovered that its leading desk chair had 200 components made from more than 800 chemical compounds, it designed an award-winning successor whose far more limited materials palette is 96% recyclable. Cycle up, virtuously. Manufacturers should design recovery value into their products at the outset. Shaw Industries, for example, recycles the nylon fiber from its worn-out carpet into brand-new carpet tile. Exploit the power of platforms. Platform design in industry tends to occur at the component level--but the materials in those components constitute a more fundamental platform. Patagonia, by recycling Capilene brand performance underwear, has achieved energy costs 76% below those for virgin sourcing. Biosphere rules can teach companies how to build ecologically friendly products that both reduce manufacturing costs and prove highly attractive to consumers. And managers need not wait for a green technological revolution to implement them.

An electrical resistivity-based method for investigation of subsurface structure

Science.gov (United States)

Alves Meira Neto, A.; Litwin, D.; Troch, P. A. A.; Ferre, T. P. A.

2017-12-01

Resolving the spatial distribution of soil porosity within the subsurface is of great importance for understanding flow and transport within heterogeneous media. Additionally, porosity patterns can be associated with the availability of water and carbon dioxide that will drive geochemical reactions and constrain microbiological growth. The use of controlled experimentation has the potential to circumvent problems related to the external and internal variability of natural systems, while also allowing a higher degree of observability. In this study, we suggest an ERT-based method of retrieving porosity fields based on the application of Archie's law associated with an experimental procedure that can be used in laboratory-scale studies. We used a 2 cubic meter soil lysimeter, equipped with 238 electrodes distributed along its walls for testing the method. The lysimeter serves as a scaled-down version of the highly monitored artificial hillslopes at the Landscape Evolution Observatory (LEO) located at Biosphere 2 - University of Arizona. The capability of the ERT system in deriving spatially distributed patterns of porosity with respect to its several sources of uncertainty was numerically evaluated. The results will be used to produce an optimal experimental design and for assessing the reliability of experimental results. This novel approach has the potential to further resolve subsurface heterogeneity within the LEO project, and highlight the use of ERT-derived results for hydro-bio-geochemical studies.

Identification and Removal of Contaminant Sequences From Ribosomal Gene Databases: Lessons From the Census of Deep Life.

Science.gov (United States)

Sheik, Cody S; Reese, Brandi Kiel; Twing, Katrina I; Sylvan, Jason B; Grim, Sharon L; Schrenk, Matthew O; Sogin, Mitchell L; Colwell, Frederick S

2018-01-01

Earth's subsurface environment is one of the largest, yet least studied, biomes on Earth, and many questions remain regarding what microorganisms are indigenous to the subsurface. Through the activity of the Census of Deep Life (CoDL) and the Deep Carbon Observatory, an open access 16S ribosomal RNA gene sequence database from diverse subsurface environments has been compiled. However, due to low quantities of biomass in the deep subsurface, the potential for incorporation of contaminants from reagents used during sample collection, processing, and/or sequencing is high. Thus, to understand the ecology of subsurface microorganisms (i.e., the distribution, richness, or survival), it is necessary to minimize, identify, and remove contaminant sequences that will skew the relative abundances of all taxa in the sample. In this meta-analysis, we identify putative contaminants associated with the CoDL dataset, recommend best practices for removing contaminants from samples, and propose a series of best practices for subsurface microbiology sampling. The most abundant putative contaminant genera observed, independent of evenness across samples, were Propionibacterium , Aquabacterium , Ralstonia , and Acinetobacter . While the top five most frequently observed genera were Pseudomonas , Propionibacterium , Acinetobacter , Ralstonia , and Sphingomonas . The majority of the most frequently observed genera (high evenness) were associated with reagent or potential human contamination. Additionally, in DNA extraction blanks, we observed potential archaeal contaminants, including methanogens, which have not been discussed in previous contamination studies. Such contaminants would directly affect the interpretation of subsurface molecular studies, as methanogenesis is an important subsurface biogeochemical process. Utilizing previously identified contaminant genera, we found that ∼27% of the total dataset were identified as contaminant sequences that likely originate from DNA

Theoretical foundation, goals, and methodology of a new science--biospherics

Science.gov (United States)

Shaffer, J A

1994-01-01

Scientific endeavor is motivated by mankind's needs, desires, and inherent nature to explore. The history of scientific revolutions involves paradigmatic breakthroughs that uncover previously unknown perspectives by which a phenomenon can be viewed. In this issue a noted scientist, Nickolai Pechurkin, gives a seminal brief on the theoretical foundation, goals, and methodology leading to a new science--biospherics. While biospherics has so far eluded a simple definition, it is not something taken from "whole cloth." Biospherics has many antecedents, but most noticeably arises from the global scale research and theory associated with the technological advances of the Space-Age. The Space-Age also created the need for totally closed life-support systems which involve experimentation with artificial biospheres.

Biosphere dose conversion Factor Importance and Sensitivity Analysis

International Nuclear Information System (INIS)

M. Wasiolek

2004-01-01

This report presents importance and sensitivity analysis for the environmental radiation model for Yucca Mountain, Nevada (ERMYN). ERMYN is a biosphere model supporting the total system performance assessment (TSPA) for the license application (LA) for the Yucca Mountain repository. This analysis concerns the output of the model, biosphere dose conversion factors (BDCFs) for the groundwater, and the volcanic ash exposure scenarios. It identifies important processes and parameters that influence the BDCF values and distributions, enhances understanding of the relative importance of the physical and environmental processes on the outcome of the biosphere model, includes a detailed pathway analysis for key radionuclides, and evaluates the appropriateness of selected parameter values that are not site-specific or have large uncertainty

'Reference Biospheres' for solid radioactive waste disposal: the BIOMASS Methodology

International Nuclear Information System (INIS)

Crossland, I.G.; Pinedo, P.; Kessler, J.H.; Torres-Vidal, C.; Walters, B.

2005-01-01

The BIOMASS Theme 1 project has developed a methodology for the logical and defensible construction of 'assessment biospheres': mathematical representations of biospheres used in the total system performance assessment of radioactive waste disposal. The BIOMASS Methodology provides a systematic approach to decision making, including decisions on how to address biosphere change. The BIOMASS Methodology was developed through consultation and collaboration with many relevant organisations, including regulators, operators and a variety of independent experts. It has been developed to be practical and to be consistent with recommendations from ICRP and IAEA on radiation protection in the context of the disposal of long-lived solid radioactive wastes. The five main steps in the methodology are described in this paper. The importance of a clear assessment context, to clarify intentions and to support a coherent biosphere assessment process within an overall repository performance assessment, is strongly emphasised. A well described assessment context is an important tool for ensuring consistency across the performance assessment as a whole. The use of interaction matrices has been found to be helpful in clarifying the interactions between different habitats within the biosphere system and the significant radionuclide transfer pathways within the biosphere system. Matrices also provide a useful means of checking for consistency

Biosphere modeling for safety assessment to high-level radioactive waste geological disposal. Application of reference biosphere methodology to safety assesment of geological disposal

International Nuclear Information System (INIS)

Baba, Tomoko; Ishihara, Yoshinao; Ishiguro, Katsuhiko; Suzuki, Yuji; Naito, Morimasa

2000-01-01

In the safety assessment of a high-level radioactive waste disposal system, it is required to estimate future radiological impacts on human beings. Consideration of living habits and the human environment in the future involves a large degree of uncertainty. To avoid endless speculation aimed at reducing such uncertainty, an approach is applied for identifying and justifying a 'reference biosphere' for use in safety assessment in Japan. considering a wide range of Japanese geological environments, saline specific reference biospheres' were developed using an approach consistent with the BIOMOVS II reference biosphere methodology. (author)

Desiccation-crack-induced salinization in deep clay sediment

Directory of Open Access Journals (Sweden)

S. Baram

2013-04-01

Full Text Available A study on water infiltration and solute transport in a clayey vadose zone underlying a dairy farm waste source was conducted to assess the impact of desiccation cracks on subsurface evaporation and salinization. The study is based on five years of continuous measurements of the temporal variation in the vadose zone water content and on the chemical and isotopic composition of the sediment and pore water in it. The isotopic composition of water stable isotopes (δ18O and δ2H in water and sediment samples, from the area where desiccation crack networks prevail, indicated subsurface evaporation down to ~ 3.5 m below land surface, and vertical and lateral preferential transport of water, following erratic preferential infiltration events. Chloride (Cl− concentrations in the vadose zone pore water substantially increased with depth, evidence of deep subsurface evaporation and down flushing of concentrated solutions from the evaporation zones during preferential infiltration events. These observations led to development of a desiccation-crack-induced salinization (DCIS conceptual model. DCIS suggests that thermally driven convective air flow in the desiccation cracks induces evaporation and salinization in relatively deep sections of the subsurface. This conceptual model supports previous conceptual models on vadose zone and groundwater salinization in fractured rock in arid environments and extends its validity to clayey soils in semi-arid environments.

Composition and structure of the shallow subsurface of Ceres revealed by crater morphology

Science.gov (United States)

Bland, Michael T.; Carol A. Raymond,; Schenk, Paul M.; Roger R. Fu,; Thomas Kneisl,; Hendrick Pasckert, Jan; Hiesinger, Harald; Frank Preusker,; Ryan S. Park,; Simone Marchi,; Scott King,; Castillo-Rogez, Julie C.; Christopher T. Russell,

2016-01-01

Before NASA’s Dawn mission, the dwarf planet Ceres was widely believed to contain a substantial ice-rich layer below its rocky surface. The existence of such a layer has significant implications for Ceres’s formation, evolution, and astrobiological potential. Ceres is warmer than icy worlds in the outer Solar System and, if its shallow subsurface is ice-rich, large impact craters are expected to be erased by viscous flow on short geologic timescales. Here we use digital terrain models derived from Dawn Framing Camera images to show that most of Ceres’s largest craters are several kilometres deep, and are therefore inconsistent with the existence of an ice-rich subsurface. We further show from numerical simulations that the absence of viscous relaxation over billion-year timescales implies a subsurface viscosity that is at least one thousand times greater than that of pure water ice. We conclude that Ceres’s shallow subsurface is no more than 30% to 40% ice by volume, with a mixture of rock, salts and/or clathrates accounting for the other 60% to 70%. However, several anomalously shallow craters are consistent with limited viscous relaxation and may indicate spatial variations in subsurface ice content.

Improvement of biosphere assessment methodology for performance assessment of geological disposal facility. 2

International Nuclear Information System (INIS)

Miki, Takahito; Yoshida, Hideji; Ikeda, Takao

2002-02-01

This report contains results on study of Geosphere-Biosphere Interface (GBI), development of biosphere assessment model for gaseous and volatile radionuclides, review of biosphere assessment and research on safety indicators. Regarding study of Geosphere-Biosphere Interface (GBI), FEP database for the Geosphere-Biosphere Transitions Zone (GBTZ) were compiled. Furthermore, release scenarios were identified from the FEP database, and review of conservativeness and robustness of the conceptual and mathematical models developed previously by JNC were undertaken. Regarding development of biosphere assessment model for gaseous and volatile radionuclides, the conceptual and mathematical models were developed, and it was confirmed that the impact of the exposure pathway regarding gas release to flux-to-dose conversion factor is small. Regarding review of biosphere assessment data, the parameters which were used on JNC second progress report were reviewed and classified using the biosphere data protocol categories. Furthermore, the data for key parameter (important but poorly characterized parameters) were revised. Regarding research on safety indicator, some kinds of safety indicators, especially for the non-radioactive contaminant and for the non-human biota, are reviewed. (author)

Review of potential subsurface permeable barrier emplacement and monitoring technologies

International Nuclear Information System (INIS)

Riggsbee, W.H.; Treat, R.L.; Stansfield, H.J.; Schwarz, R.M.; Cantrell, K.J.; Phillips, S.J.

1994-02-01

This report focuses on subsurface permeable barrier technologies potentially applicable to existing waste disposal sites. This report describes candidate subsurface permeable barriers, methods for emplacing these barriers, and methods used to monitor the barrier performance. Two types of subsurface barrier systems are described: those that apply to contamination.in the unsaturated zone, and those that apply to groundwater and to mobile contamination near the groundwater table. These barriers may be emplaced either horizontally or vertically depending on waste and site characteristics. Materials for creating permeable subsurface barriers are emplaced using one of three basic methods: injection, in situ mechanical mixing, or excavation-insertion. Injection is the emplacement of dissolved reagents or colloidal suspensions into the soil at elevated pressures. In situ mechanical mixing is the physical blending of the soil and the barrier material underground. Excavation-insertion is the removal of a soil volume and adding barrier materials to the space created. Major vertical barrier emplacement technologies include trenching-backfilling; slurry trenching; and vertical drilling and injection, including boring (earth augering), cable tool drilling, rotary drilling, sonic drilling, jetting methods, injection-mixing in drilled holes, and deep soil mixing. Major horizontal barrier emplacement technologies include horizontal drilling, microtunneling, compaction boring, horizontal emplacement, longwall mining, hydraulic fracturing, and jetting methods

Biospheres and solar system exploration

Science.gov (United States)

Paine, Thomas O.

1990-01-01

The implications of biosphere technology is briefly examined. The exploration status and prospects of each world in the solar system is briefly reviewed, including the asteroid belt, the moon, and comets. Five program elements are listed as particularly critical for future interplanetary operations during the coming extraterrestrial century. They include the following: (1) a highway to Space (earth orbits); (2) Orbital Spaceports to support spacecraft assembly, storage, repair, maintenance, refueling, launch, and recovery; (3) a Bridge Between Worlds to transport cargo and crews to the moon and beyond to Mars; (4) Prospecting and Resource Utilization Systems to map and characterize the resources of planets, moons, and asteroids; and (5) Closed Ecology Biospheres. The progress in these five field is reviewed.

Direct heat resource assessment and subsurface information systems for geothermal aquifers; the Dutch perspetive

NARCIS (Netherlands)

Kramers, L.; Wees, van J.-D.; Pluymaekers, M.P.D.; Kronimus, A.; Boxem, T.

2012-01-01

A resource assessment methodology has been developed to designate prospective high permeable clastic aquifers and to assess the amount of potential geothermal energy in the Netherlands. It builds from the wealth of deep subsurface data from oil and gas exploration and production which is

Ecuador's YasunI Biosphere Reserve: a brief modern history and conservation challenges

International Nuclear Information System (INIS)

Finer, Matt; Vijay, Varsha; Jenkins, Clinton N; Ponce, Fernando; Kahn, Ted R

2009-01-01

Ecuador's YasunI Man and the Biosphere Reserve-located at the intersection of the Amazon, the Andes mountains, and the equator-is home to extraordinary biodiversity and a recently contacted Amazonian indigenous group known as the Waorani (or Huaorani). Relatives of the Waorani, the Tagaeri and Taromenane, still live in voluntary isolation deep in the reserve, with no peaceful contact with the outside world. The YasunI Biosphere Reserve also sits atop large reserves of crude oil, Ecuador's chief export, and contains an abundance of valuable timber species. This volatile combination has led to intense conflicts, and subsequently, increased international interest and concern. To make the issues confronting YasunI more accessible to a growing audience of interested parties, we synthesized information on the biological, social, and political issues of the region, providing a concise overview of its modern history and conservation challenges. We constructed a chronology of key events in the YasunI region over the past century and a series of maps designed to guide readers to a better understanding of the area's complicated array of overlapping designations. Main topics of analysis and discussion include: the Waorani and their ancestors living in voluntary isolation, YasunI National Park, illegal logging, missionary impacts, oil-development-related impacts and conflicts, and the Ecuadorian government's innovative YasunI-ITT Initiative (ITT: Ishpingo-Tiputini-Tambococha).

Spanish methodological approach for biosphere assessment of radioactive waste disposal

International Nuclear Information System (INIS)

Agueero, A.; Pinedo, P.; Cancio, D.; Simon, I.; Moraleda, M.; Perez-Sanchez, D.; Trueba, C.

2007-01-01

The development of radioactive waste disposal facilities requires implementation of measures that will afford protection of human health and the environment over a specific temporal frame that depends on the characteristics of the wastes. The repository design is based on a multi-barrier system: (i) the near-field or engineered barrier, (ii) far-field or geological barrier and (iii) the biosphere system. Here, the focus is on the analysis of this last system, the biosphere. A description is provided of conceptual developments, methodological aspects and software tools used to develop the Biosphere Assessment Methodology in the context of high-level waste (HLW) disposal facilities in Spain. This methodology is based on the BIOMASS 'Reference Biospheres Methodology' and provides a logical and systematic approach with supplementary documentation that helps to support the decisions necessary for model development. It follows a five-stage approach, such that a coherent biosphere system description and the corresponding conceptual, mathematical and numerical models can be built. A discussion on the improvements implemented through application of the methodology to case studies in international and national projects is included. Some facets of this methodological approach still require further consideration, principally an enhanced integration of climatology, geography and ecology into models considering evolution of the environment, some aspects of the interface between the geosphere and biosphere, and an accurate quantification of environmental change processes and rates

Spanish methodological approach for biosphere assessment of radioactive waste disposal.

Science.gov (United States)

Agüero, A; Pinedo, P; Cancio, D; Simón, I; Moraleda, M; Pérez-Sánchez, D; Trueba, C

2007-10-01

The development of radioactive waste disposal facilities requires implementation of measures that will afford protection of human health and the environment over a specific temporal frame that depends on the characteristics of the wastes. The repository design is based on a multi-barrier system: (i) the near-field or engineered barrier, (ii) far-field or geological barrier and (iii) the biosphere system. Here, the focus is on the analysis of this last system, the biosphere. A description is provided of conceptual developments, methodological aspects and software tools used to develop the Biosphere Assessment Methodology in the context of high-level waste (HLW) disposal facilities in Spain. This methodology is based on the BIOMASS "Reference Biospheres Methodology" and provides a logical and systematic approach with supplementary documentation that helps to support the decisions necessary for model development. It follows a five-stage approach, such that a coherent biosphere system description and the corresponding conceptual, mathematical and numerical models can be built. A discussion on the improvements implemented through application of the methodology to case studies in international and national projects is included. Some facets of this methodological approach still require further consideration, principally an enhanced integration of climatology, geography and ecology into models considering evolution of the environment, some aspects of the interface between the geosphere and biosphere, and an accurate quantification of environmental change processes and rates.

Characterization of Microbial Communities in Subsurface Nuclear Blast Cavities of the Nevada Test Site

Energy Technology Data Exchange (ETDEWEB)

Moser, Duane P.; Bruckner, Jim; Fisher, Jen; Czerwinski, Ken; Russell, Charles E.; Zavarin, Mavrik

2010-09-01

This U.S. Department of Energy (DOE) Environmental Remediation Sciences Project (ERSP) was designed to test fundamental hypotheses concerning the existence and nature of indigenous microbial populations of Nevada Test Site subsurface nuclear test/detonation cavities. Now called Subsurface Biogeochemical Research (SBR), this program’s Exploratory Research (ER) element, which funded this research, is designed to support high risk, high potential reward projects. Here, five cavities (GASCON, CHANCELLOR, NASH, ALEMAN, and ALMENDRO) and one tunnel (U12N) were sampled using bailers or pumps. Molecular and cultivation-based techniques revealed bacterial signatures at five sites (CHANCELLOR may be lifeless). SSU rRNA gene libraries contained diverse and divergent microbial sequences affiliated with known metal- and sulfur-cycling microorganisms, organic compound degraders, microorganisms from deep mines, and bacteria involved in selenate reduction and arsenite oxidation. Close relatives of Desulforudis audaxviator, a microorganism thought to subsist in the terrestrial deep subsurface on H2 and SO42- produced by radiochemical reactions, was detected in the tunnel waters. NTS-specific media formulations were used to culture and quantify nitrate-, sulfate-, iron-reducing, fermentative, and methanogenic microorganisms. Given that redox manipulations mediated by microorganisms can impact the mobility of DOE contaminants, our results should have implications for management strategies at this and other DOE sites.

Characterization of microbial communities in subsurface nuclear blast cavities of the Nevada Test Site

Energy Technology Data Exchange (ETDEWEB)

Moser, Duane P; Czerwinski, Ken; Russell, Charles E; Zavarin, Mavrik

2010-07-13

This US Department of Energy (DOE) Environmental Remediation Sciences Project (ERSP) was designed to test fundamental hypotheses concerning the existence and nature of indigenous microbial populations of Nevada Test Site subsurface nuclear test/detonation cavities. Now called Subsurface Biogeochemical Research (SBR), this program's Exploratory Research (ER) element, which funded this research, is designed to support high risk, high potential reward projects. Here, five cavities (GASCON, CHANCELLOR, NASH, ALEMAN, and ALMENDRO) and one tunnel (U12N) were sampled using bailers or pumps. Molecular and cultivation-based techniques revealed bacterial signatures at five sites (CHANCELLOR may be lifeless). SSU rRNA gene libraries contained diverse and divergent microbial sequences affiliated with known metal- and sulfur-cycling microorganisms, organic compound degraders, microorganisms from deep mines, and bacteria involved in selenate reduction and arsenite oxidation. Close relatives of Desulforudis audaxviator, a microorganism thought to subsist in the terrestrial deep subsurface on H2 and SO42- produced by radiochemical reactions, was detected in the tunnel waters. NTS-specific media formulations were used to culture and quantify nitrate-, sulfate-, iron-reducing, fermentative, and methanogenic microorganisms. Given that redox manipulations mediated by microorganisms can impact the mobility of DOE contaminants, our results should have implications for management strategies at this and other DOE sites.

Characterization of Microbial Communities in Subsurface Nuclear Blast Cavities of the Nevada Test Site

International Nuclear Information System (INIS)

Moser, Duane P.; Bruckner, Jim; Fisher, Jen; Czerwinski, Ken; Russell, Charles E.; Zavarin, Mavrik

2010-01-01

This U.S. Department of Energy (DOE) Environmental Remediation Sciences Project (ERSP) was designed to test fundamental hypotheses concerning the existence and nature of indigenous microbial populations of Nevada Test Site subsurface nuclear test/detonation cavities. Now called Subsurface Biogeochemical Research (SBR), this program's Exploratory Research (ER) element, which funded this research, is designed to support high risk, high potential reward projects. Here, five cavities (GASCON, CHANCELLOR, NASH, ALEMAN, and ALMENDRO) and one tunnel (U12N) were sampled using bailers or pumps. Molecular and cultivation-based techniques revealed bacterial signatures at five sites (CHANCELLOR may be lifeless). SSU rRNA gene libraries contained diverse and divergent microbial sequences affiliated with known metal- and sulfur-cycling microorganisms, organic compound degraders, microorganisms from deep mines, and bacteria involved in selenate reduction and arsenite oxidation. Close relatives of Desulforudis audaxviator, a microorganism thought to subsist in the terrestrial deep subsurface on H 2 and SO 4 2- produced by radiochemical reactions, was detected in the tunnel waters. NTS-specific media formulations were used to culture and quantify nitrate-, sulfate-, iron-reducing, fermentative, and methanogenic microorganisms. Given that redox manipulations mediated by microorganisms can impact the mobility of DOE contaminants, our results should have implications for management strategies at this and other DOE sites.

Earthquakes - a danger to deep-lying repositories?

International Nuclear Information System (INIS)

2012-03-01

This booklet issued by the Swiss National Cooperative for the Disposal of Radioactive Waste NAGRA takes a look at geological factors concerning earthquakes and the safety of deep-lying repositories for nuclear waste. The geological processes involved in the occurrence of earthquakes are briefly looked at and the definitions for magnitude and intensity of earthquakes are discussed. Examples of damage caused by earthquakes are given. The earthquake situation in Switzerland is looked at and the effects of earthquakes on sub-surface structures and deep-lying repositories are discussed. Finally, the ideas proposed for deep-lying geological repositories for nuclear wastes are discussed

Using remote-sensing and the Simple Biosphere model (SiB4) to analyze the seasonality and productivity of the terrestrial biosphere.

Science.gov (United States)

Cheeseman, M.; Denning, S.; Baker, I. T.

2017-12-01

Understanding the variability and seasonality of carbon fluxes from the terrestrial biosphere is integral to understanding the mechanisms and drivers of the global carbon cycle. However, there are many regions across the globe where in situ observations are sparse, such as the Amazon rainforest and the African Sahel. The latest version of the Simple-Biosphere model (SiB4) predicts a suite of biophysical variables such as terrestrial carbon flux (GPP), solar induced fluorescence (SIF), fraction of photosynthetically active radiation (FPAR), and leaf area index (LAI). By comparing modeled values to a suite of satellite and in situ observations we produce a robust analysis of the seasonality and productivity of the terrestrial biosphere in a variety of biome types across the globe.

Subsurface Ocean Tides in Enceladus and Other Icy Moons

Science.gov (United States)

Beuthe, M.

2016-12-01

Could tidal dissipation within Enceladus' subsurface ocean account for the observed heat flow? Earthlike models of dynamical tides give no definitive answer because they neglect the influence of the crust. I propose here the first model of dissipative tides in a subsurface ocean, by combining the Laplace Tidal Equations with the membrane approach. For the first time, it is possible to compute tidal dissipation rates within the crust, ocean, and mantle in one go. I show that oceanic dissipation is strongly reduced by the crustal constraint, and thus contributes little to Enceladus' present heat budget. Tidal resonances could have played a role in a forming or freezing ocean less than 100 meters deep. The model is general: it applies to all icy satellites with a thin crust and a shallow or stratified ocean. Scaling rules relate the resonances and dissipation rate of a subsurface ocean to the ones of a surface ocean. If the ocean has low viscosity, the westward obliquity tide does not move the crust. Therefore, crustal dissipation due to dynamical obliquity tides can differ from the static prediction by up to a factor of two.

A multiscale fixed stress split iterative scheme for coupled flow and poromechanics in deep subsurface reservoirs

Science.gov (United States)

Dana, Saumik; Ganis, Benjamin; Wheeler, Mary F.

2018-01-01

In coupled flow and poromechanics phenomena representing hydrocarbon production or CO2 sequestration in deep subsurface reservoirs, the spatial domain in which fluid flow occurs is usually much smaller than the spatial domain over which significant deformation occurs. The typical approach is to either impose an overburden pressure directly on the reservoir thus treating it as a coupled problem domain or to model flow on a huge domain with zero permeability cells to mimic the no flow boundary condition on the interface of the reservoir and the surrounding rock. The former approach precludes a study of land subsidence or uplift and further does not mimic the true effect of the overburden on stress sensitive reservoirs whereas the latter approach has huge computational costs. In order to address these challenges, we augment the fixed-stress split iterative scheme with upscaling and downscaling operators to enable modeling flow and mechanics on overlapping nonmatching hexahedral grids. Flow is solved on a finer mesh using a multipoint flux mixed finite element method and mechanics is solved on a coarse mesh using a conforming Galerkin method. The multiscale operators are constructed using a procedure that involves singular value decompositions, a surface intersections algorithm and Delaunay triangulations. We numerically demonstrate the convergence of the augmented scheme using the classical Mandel's problem solution.

Diversity and distribution of microbes in deep-sea sub-vent systems, using newly designed in situ growth chambers

Science.gov (United States)

Higashi, Y.; Sunamura, M.; Utsumi, M.; Urabe, T.; Maruyama, A.

2004-12-01

Subsurface of deep-sea hydrothermal vent environments is one of the most difficult fields on the Earth to approach and collect reliable samples for microbiological study. In our Archaean Park project, we developed in situ incubation instruments to directly collect microbes from sub-vent fields through a drilled borehole. After excavation using a portable submarine driller (BMS) around deep-sea hydrothermal vents in the Suiyo Seamount on the Izu-Bonin Arc (2001, 2002) and the South Mariana (2003), microbial diversity was examined in samples collected from the boreholes, as well as natural vents, using catheter- and column-type in situ growth chambers. In the catheter samples collected from the Suiyo Seamount, several novel phylotypes of microbial SSU rRNA genes were assigned within epsilon-Proteobacteria and hyperthermophile-related Euryarchaea groups. The former novel epsilon group (SSSV-BE1) was also detected in the South Mariana, but they only appeared in the catheter samples collected just below the venting seafloor. These suggest that the group must be significant in warm, shallow and microaerobic sub-vent layers over the sea, at least in the northwest Pacific Ocean. The column-type in situ growth chamber was specially designed for creating and maintaining physico-chemical gradients in a ca. 40-cm-long column situated on an active vent. In Suiyo Seamount samples (vent temp.: ca. 30-100 degree C), a unique vertical profile was found in the diversity of Archaea. At the column bottom, most of the clones were assigned to be members within the lithoautotrophic thermophilic Ignicoccus, while heterotrophic thermophilic Thermococcus were abundant at the column top. Similar vertical profile has also been appeared in the column samples from the South Mariana. Further quantitative population analysis is now under going using these samples. Our approach to the sub-vent biosphere by the combination of drilling and in situ incubation is almost sure to give us important clues

Analysis specifications for the CC3 biosphere model biotrac

Energy Technology Data Exchange (ETDEWEB)

Szekely, J G; Wojciechowski, L C; Stephens, M E; Halliday, H A

1994-12-01

The CC3 (Canadian Concept, generation 3) model BIOTRAC (Biosphere Transport and Consequences) describes the movement in the biosphere of releases from an underground disposal vault, and the consequent radiological dose to a reference individual. Concentrations of toxic substances in different parts of the biosphere are also calculated. BIOTRAC was created specifically for the postclosure analyses of the Environmental Impact Statement that AECL is preparing on the concept for disposal of Canada`s nuclear fuel waste. The model relies on certain assumptions and constraints on the system, which are described by Davis et al. Accordingly, great care must be exercised if BIOTRAC is used for any other purpose.

Dilution limits dissolved organic carbon utilization in the deep ocean

KAUST Repository

Arrieta, Jesus

2015-03-19

Oceanic dissolved organic carbon (DOC) is the second largest reservoir of organic carbon in the biosphere. About 72% of the global DOC inventory is stored in deep oceanic layers for years to centuries, supporting the current view that it consists of materials resistant to microbial degradation. An alternative hypothesis is that deep-water DOC consists of many different, intrinsically labile compounds at concentrations too low to compensate for the metabolic costs associated to their utilization. Here, we present experimental evidence showing that low concentrations rather than recalcitrance preclude consumption of a substantial fraction of DOC, leading to slow microbial growth in the deep ocean. These findings demonstrate an alternative mechanism for the long-term storage of labile DOC in the deep ocean, which has been hitherto largely ignored. © 2015, American Association for the Advancement of Science. All rights reserved.

Dilution limits dissolved organic carbon utilization in the deep ocean

KAUST Repository

Arrieta, J M; Mayol, Eva; Hansman, Roberta L.; Herndl, Gerhard J.; Dittmar, Thorsten; Duarte, Carlos M.

2015-01-01

Oceanic dissolved organic carbon (DOC) is the second largest reservoir of organic carbon in the biosphere. About 72% of the global DOC inventory is stored in deep oceanic layers for years to centuries, supporting the current view that it consists of materials resistant to microbial degradation. An alternative hypothesis is that deep-water DOC consists of many different, intrinsically labile compounds at concentrations too low to compensate for the metabolic costs associated to their utilization. Here, we present experimental evidence showing that low concentrations rather than recalcitrance preclude consumption of a substantial fraction of DOC, leading to slow microbial growth in the deep ocean. These findings demonstrate an alternative mechanism for the long-term storage of labile DOC in the deep ocean, which has been hitherto largely ignored. © 2015, American Association for the Advancement of Science. All rights reserved.

Final Technical Report. Origins of subsurface microorganisms: Relating laboratory microcosm studies to a geologic time scale; FINAL

International Nuclear Information System (INIS)

Kieft, Thomas; Amy, Penny S.; Phillips, Fred M.

1998-01-01

This project was conducted as part of the Department of Energy's Deep Subsurface Science Program. It was part of a larger effort to determine the origins of subsurface microorganisms. Two hypotheses have been suggested for the origins of subsurface microorganisms: (1) microorganisms were deposited at the time of (or shortly after) geologic deposition of rocks and sediments (the in situ survival hypothesis), and (2) microorganisms have been transported from surface environments to subsurface rocks and sediments since the time of geologic deposition (transport hypothesis). These two hypotheses are not mutually exclusive. Depending on the geological setting, either one or both of these hypotheses may best explain microbial origins. Our project focused on the in situ survival hypothesis. We tested the hypothesis that microorganisms (individuals populations and communities) can survive long-term sequestration within subsurface sediments. Other objectives were to identify geologic conditions that favor long-term survival, identify physiological traits of microorganisms that favor long-term survival, and determine which groups of microorganisms are most likely to survive long-term sequestration in subsurface sediments. We tested this hypothesis using a combination of pure culture techniques in laboratory microcosms under controlled conditions and field experiments with buried subsurface sediments

An overview of biosphere modelling for the assessment of solid waste disposal

International Nuclear Information System (INIS)

Smith, G.M.

1990-01-01

The purpose of this paper is to discuss the role of biosphere modelling in relation to the overall assessment of disposal of solid radioactive waste. Model structure and data requirements are strongly influenced by a number of basic factors. Firstly, the alternative forms of safety criteria and regulatory requirements imply different end-points for biosphere models. Secondly, alternative disposal concepts can influence the significance of the biosphere as a barrier or diluting/concentrating feature affecting exposure of man. Thirdly, the range of different possibilities for release to the biosphere, including releases following intrusion, is very extensive. The requirements and state of development of biosphere models are discussed in relation to these factors along with methods being adopted to provide some expression of confidence in model results. 37 refs

Improvement of biosphere assessment methodology for performance assessment of geological disposal facility. 2. Outline

International Nuclear Information System (INIS)

Miki, Takahito; Yoshida, Hideji; Ikeda, Takao

2002-02-01

This report contains results on study of Geosphere-Biosphere Interface (GBI), development of biosphere assessment model for gaseous and volatile radionuclides, review of biosphere assessment and research on safety indicators. Regarding study of Geosphere-Biosphere Interface (GBI), FEP database for the Geosphere-Biosphere Transitions Zone (GBTZ) were compiled. Furthermore, release scenarios were identified from the FEP database, and review of conservativeness and robustness of the conceptual and mathematical models developed previously by JNC were undertaken. Regarding development of biosphere assessment model for gaseous and volatile radionuclides, the conceptual and mathematical models were developed, and it was confirmed that the impact of the exposure pathway regarding gas release to flux-to-dose conversion factor is small. Regarding review of biosphere assessment data, the parameters which were used on JNC second progress report were reviewed and classified using the biosphere data protocol categories. Furthermore, the data for key parameter (important but poorly characterized parameters) were revised. Regarding research on safety indicator, some kinds of safety indicators, especially for the non-radioactive contaminant and for the non-human biota, are reviewed. (author)

Ciliates and the rare biosphere: a review.

Science.gov (United States)

Dunthorn, Micah; Stoeck, Thorsten; Clamp, John; Warren, Alan; Mahé, Frédéric

2014-01-01

Here we provide a brief review of the rare biosphere from the perspective of ciliates and other microbial eukaryotes. We trace research on rarity from its lack of much in-depth focus in morphological and Sanger sequencing projects, to its central importance in analyses using high throughput sequencing strategies. The problem that the rare biosphere is potentially comprised of mostly errors is then discussed in the light of asking community-comparative, novel-diversity, and ecosystem-functioning questions. © 2014 The Author(s) Journal of Eukaryotic Microbiology © 2014 International Society of Protistologists.

Modeling the Dutch subsurface: From paper product towards dissemination of a 3D-digital model

NARCIS (Netherlands)

Dulk, M. den; Doornenbal, J.C.; Veen, J.H. ten

2015-01-01

The Geological Survey of the Netherlands carried out several major mapping projects to construct a consistent, regional-scale petroleum geological framework for the deep subsurface of the Netherlands, both on- and offshore. In the last decade the modeling approach has developed into a fully digital

An Estimate of the Total DNA in the Biosphere.

Science.gov (United States)

Landenmark, Hanna K E; Forgan, Duncan H; Cockell, Charles S

2015-06-01

Modern whole-organism genome analysis, in combination with biomass estimates, allows us to estimate a lower bound on the total information content in the biosphere: 5.3 × 1031 (±3.6 × 1031) megabases (Mb) of DNA. Given conservative estimates regarding DNA transcription rates, this information content suggests biosphere processing speeds exceeding yottaNOPS values (1024 Nucleotide Operations Per Second). Although prokaryotes evolved at least 3 billion years before plants and animals, we find that the information content of prokaryotes is similar to plants and animals at the present day. This information-based approach offers a new way to quantify anthropogenic and natural processes in the biosphere and its information diversity over time.

Energy flows of the biosphere

Energy Technology Data Exchange (ETDEWEB)

Gorshkov, V.G.

1980-01-01

Mankind consumes more than 90% of the animal production of the world. The locking of a significant part of the biosphere energy flow onto the anthropogenic chain leads to the dislodging of natural forms of organisms of the biosphere, change of its functioning and self-regulation. For the maintenance of stable existence of a small set of cultivated plants and domestic animals not forming the complete set indispensable for reaction to the change of natural conditions, man is compelled to follow the path of auxiliary investments of energy and to compensate for the destruction of closed circulations of food substances by the flow of fertilizers extracted from natural deposits. Energy assessments show the lack of realism of many projects for increasing the global energy flow in the anthropogenic channel by increasing the full flow of energy of the biosphere. To obtain the net production of the contemporary plowed field in hotbed on the basis of hydroponics there is required 2 x 10/sup 14/ watts of additional energy. To provide for the inflow of such an amount of energy (and also vast volumes of fresh water) presents extremely complicated problems. According to the author's calculations, in a provisional conversion of all production of green plants, all gas and petroleum and edible food with an efficiency equal to 1%, it is possible to provide food reserves equal to one annual harvest of the plowed fields of the world of 2 x 10/sup 9/ tons.

Summary of the IAEA's BIOMASS reference biosphere methodology for Environment Agency staff

International Nuclear Information System (INIS)

Coughtrey, P.

2001-01-01

The International Atomic Energy Agency (IAEA) programme on BIOsphere Modelling and ASSessment (BIOMASS) was launched in October 1996, and will complete during 2001. The BIOMASS programme aimed to develop and apply a methodology for defining biospheres for practical radiological assessment of releases from radioactive waste disposal. This report provides a summary description of the BIOMASS methodology. The BIOMASS methodology has been developed through international collaboration and represents a major milestone in biosphere modelling. It provides an approach supported by a wide range of developers, regulators, biosphere experts and safety assessment specialists. The Environment Agency participated actively in the BIOMASS programme

Unconventional energy resources in a crowded subsurface: Reducing uncertainty and developing a separation zone concept for resource estimation and deep 3D subsurface planning using legacy mining data.

Science.gov (United States)

Monaghan, Alison A

2017-12-01

Over significant areas of the UK and western Europe, anthropogenic alteration of the subsurface by mining of coal has occurred beneath highly populated areas which are now considering a multiplicity of 'low carbon' unconventional energy resources including shale gas and oil, coal bed methane, geothermal energy and energy storage. To enable decision making on the 3D planning, licensing and extraction of these resources requires reduced uncertainty around complex geology and hydrogeological and geomechanical processes. An exemplar from the Carboniferous of central Scotland, UK, illustrates how, in areas lacking hydrocarbon well production data and 3D seismic surveys, legacy coal mine plans and associated boreholes provide valuable data that can be used to reduce the uncertainty around geometry and faulting of subsurface energy resources. However, legacy coal mines also limit unconventional resource volumes since mines and associated shafts alter the stress and hydrogeochemical state of the subsurface, commonly forming pathways to the surface. To reduce the risk of subsurface connections between energy resources, an example of an adapted methodology is described for shale gas/oil resource estimation to include a vertical separation or 'stand-off' zone between the deepest mine workings, to ensure the hydraulic fracturing required for shale resource production would not intersect legacy coal mines. Whilst the size of such separation zones requires further work, developing the concept of 3D spatial separation and planning is key to utilising the crowded subsurface energy system, whilst mitigating against resource sterilisation and environmental impacts, and could play a role in positively informing public and policy debate. Copyright © 2017 British Geological Survey, a component institute of NERC. Published by Elsevier B.V. All rights reserved.

World campaign for the biosphere

Energy Technology Data Exchange (ETDEWEB)

Worthington, E.B.

1982-07-01

Four aims are included in the Draft Declaration about the Champaign for The Biosphere; 1) education and allied activities, 2) scientific understanding, 3) practical activities, and 4) accommodation of humanity to The Biosphere. There is a strong case for application to practical affairs of what is already known. The campaign might focus initially on problems that illustrate changing attitudes which are the result of research and experience. Examples include the Green revolution in agriculture and, in engineering, the swing of changing attitudes to the primary and ancillary effects of large projects for hydro-power and irrigation. The need for conservation of natural resources by rational, ecologically wise use is stressed. Educational and medical programs for planned parenthood are already available. The problem will be to boost them to top priority in the countries that need them most. (JMT)

The biosphere: Problems and solutions; Proceedings of the Miami International Symposium on the Biosphere, Miami Beach, FL, April 23, 24, 1984

Science.gov (United States)

Veziroglu, T. N.

The objective of the Miami International Symposium on the Biosphere was to provide a forum for the presentation of the latest research findings on the environmental effects of human activities. The topics discussed are related to biosphere reserves, environmental aspects of hydrocarbon fuels, radioactivity and nuclear waste, land management, acid rains, water quality, water resources, coastal resources management, the pollution of rivers, industrial waste, economic development and the environment, health hazards and solutions, endangered species, environmentally compatible systems, space pollution, and global considerations. Attention is given to questions regarding global security and sustainable development, environethics as a global strategy for environmental quality, a gestalt approach to the environment, potential indicators for monitoring biosphere reserves, a review of regional impacts associated with the development of U.S. synthetic fuel resources, water resources in the Soviet Union, and pollution-free pesticides.

A comparison between the example reference biosphere model ERB 2B and a process-based model: simulation of a natural release scenario.

Science.gov (United States)

Almahayni, T

2014-12-01

The BIOMASS methodology was developed with the objective of constructing defensible assessment biospheres for assessing potential radiological impacts of radioactive waste repositories. To this end, a set of Example Reference Biospheres were developed to demonstrate the use of the methodology and to provide an international point of reference. In this paper, the performance of the Example Reference Biosphere model ERB 2B associated with the natural release scenario, discharge of contaminated groundwater to the surface environment, was evaluated by comparing its long-term projections of radionuclide dynamics and distribution in a soil-plant system to those of a process-based, transient advection-dispersion model (AD). The models were parametrised with data characteristic of a typical rainfed winter wheat crop grown on a sandy loam soil under temperate climate conditions. Three safety-relevant radionuclides, (99)Tc, (129)I and (237)Np with different degree of sorption were selected for the study. Although the models were driven by the same hydraulic (soil moisture content and water fluxes) and radiological (Kds) input data, their projections were remarkably different. On one hand, both models were able to capture short and long-term variation in activity concentration in the subsoil compartment. On the other hand, the Reference Biosphere model did not project any radionuclide accumulation in the topsoil and crop compartments. This behaviour would underestimate the radiological exposure under natural release scenarios. The results highlight the potential role deep roots play in soil-to-plant transfer under a natural release scenario where radionuclides are released into the subsoil. When considering the relative activity and root depth profiles within the soil column, much of the radioactivity was taken up into the crop from the subsoil compartment. Further improvements were suggested to address the limitations of the Reference Biosphere model presented in this paper

Biosphere of the earth as a life-support system (LSS) for mankind

Science.gov (United States)

Pechurkin, Nickolay

As a component of biosphere the mankind became the most powerful and active link recently. Exponential growth of human population number and of some technological indicators of its development becomes menacing for steady (stationary or close-to-stationary) functioning of biosphere as single whole. Anyway, we should be able to estimate quantitatively limits of pos-sible anthropogenic impact on functional parameters of biosphere. Considering biosphere as a natural LSS, we can receive the helpful information for working out and creation of artificial LSS of various types. Big biotic cycle induced with flows of a solar energy, is a basis of func-tioning of biosphere and its basic cells -ecosystems. In comparison with the majority natural ecosystems, the biosphere has very high factor of closure of substance circulation, especially limiting biogenic elements: nitrogen and phosphorus. Voluntarily or not, the mankind interferes in big biotic cycle and modifies it. For example, extracting mineral fertilizers for cultivation of agricultural crops, we return in circulation lost before substances, type nitric, potassic, phos-phoric salts. Burning fossils of organic carbon (oil, gas, coal), we raise concentration of carbon dioxide in atmosphere. The melting of a permafrost connected with activity of mankind, is capable to lead to excretion of other greenhouse gases, in particular, methane. It's possible to summarize briefly the main functional properties of the biosphere: Integrity, Closure, Substance cycling, Steady state, Energy dependence. These properties of the biosphere, as a LSS, ensure potentially everlasting life under the conditions of a limited quantity of substrate suitable for the life on the planet. But the selfish mankind is able to destroy harmonic adjustment of this unique natural mechanism

Factual biosphere database for Dounreay and the surrounding area

International Nuclear Information System (INIS)

Broderick, M.A.

1991-12-01

This report documents from open published sources a factual database appropriate to the Dounreay region including the coastal marine environment for present day biosphere conditions. A detailed description of the present day environment in the Dounreay area is provided. This includes a description of the natural environment and climate. Site specific data required for biosphere modelling are also outlined. (author)

Factual biosphere database for Dounreay and the surrounding area

Energy Technology Data Exchange (ETDEWEB)

Broderick, M A [ANS Consultants Ltd., Epsom (United Kingdom)

1991-12-01

This report documents from open published sources a factual database appropriate to the Dounreay region including the coastal marine environment for present day biosphere conditions. A detailed description of the present day environment in the Dounreay area is provided. This includes a description of the natural environment and climate. Site specific data required for biosphere modelling are also outlined. (author).

Factual biosphere database for Sellafield and the surrounding area

Energy Technology Data Exchange (ETDEWEB)

Broderick, M A [ANS Consultants Ltd., Epsom (United Kingdom)

1991-12-01

This report documents from open published sources a factual database appropriate to the Sellafield region including the coastal marine environment for present day biosphere conditions. A detailed description of the present day environment in the Sellafield area is provided. This includes a description of the natural environment and climate. Site specific data required for biosphere modelling are also outlined. (author).

Factual biosphere database for Sellafield and the surrounding area

International Nuclear Information System (INIS)

Broderick, M.A.

1991-12-01

This report documents from open published sources a factual database appropriate to the Sellafield region including the coastal marine environment for present day biosphere conditions. A detailed description of the present day environment in the Sellafield area is provided. This includes a description of the natural environment and climate. Site specific data required for biosphere modelling are also outlined. (author)

Biogeochemical signals from deep microbial life in terrestrial crust.

Directory of Open Access Journals (Sweden)

Yohey Suzuki

Full Text Available In contrast to the deep subseafloor biosphere, a volumetrically vast and stable habitat for microbial life in the terrestrial crust remains poorly explored. For the long-term sustainability of a crustal biome, high-energy fluxes derived from hydrothermal circulation and water radiolysis in uranium-enriched rocks are seemingly essential. However, the crustal habitability depending on a low supply of energy is unknown. We present multi-isotopic evidence of microbially mediated sulfate reduction in a granitic aquifer, a representative of the terrestrial crust habitat. Deep meteoric groundwater was collected from underground boreholes drilled into Cretaceous Toki granite (central Japan. A large sulfur isotopic fractionation of 20-60‰ diagnostic to microbial sulfate reduction is associated with the investigated groundwater containing sulfate below 0.2 mM. In contrast, a small carbon isotopic fractionation (<30‰ is not indicative of methanogenesis. Except for 2011, the concentrations of H2 ranged mostly from 1 to 5 nM, which is also consistent with an aquifer where a terminal electron accepting process is dominantly controlled by ongoing sulfate reduction. High isotopic ratios of mantle-derived 3He relative to radiogenic 4He in groundwater and the flux of H2 along adjacent faults suggest that, in addition to low concentrations of organic matter (<70 µM, H2 from deeper sources might partly fuel metabolic activities. Our results demonstrate that the deep biosphere in the terrestrial crust is metabolically active and playing a crucial role in the formation of reducing groundwater even under low-energy fluxes.

Group dynamics challenges: Insights from Biosphere 2 experiments

Science.gov (United States)

Nelson, Mark; Gray, Kathelin; Allen, John P.

2015-07-01

Successfully managing group dynamics of small, physically isolated groups is vital for long duration space exploration/habitation and for terrestrial CELSS (Controlled Environmental Life Support System) facilities with human participants. Biosphere 2 had important differences and shares some key commonalities with both Antarctic and space environments. There were a multitude of stress factors during the first two year closure experiment as well as mitigating factors. A helpful tool used at Biosphere 2 was the work of W.R. Bion who identified two competing modalities of behavior in small groups. Task-oriented groups are governed by conscious acceptance of goals, reality-thinking in relation to time and resources, and intelligent management of challenges. The opposing unconscious mode, the "basic-assumption" ("group animal") group, manifests through Dependency/Kill the Leader, Fight/Flight and Pairing. These unconscious dynamics undermine and can defeat the task group's goal. The biospherians experienced some dynamics seen in other isolated teams: factions developing reflecting personal chemistry and disagreements on overall mission procedures. These conflicts were exacerbated by external power struggles which enlisted support of those inside. Nevertheless, the crew evolved a coherent, creative life style to deal with some of the deprivations of isolation. The experience of the first two year closure of Biosphere 2 vividly illustrates both vicissitudes and management of group dynamics. The crew overrode inevitable frictions to creatively manage both operational and research demands and opportunities of the facility, thus staying 'on task' in Bion's group dynamics terminology. The understanding that Biosphere 2 was their life support system may also have helped the mission to succeed. Insights from the Biosphere 2 experience can help space and remote missions cope successfully with the inherent challenges of small, isolated crews.

Group dynamics challenges: Insights from Biosphere 2 experiments.

Science.gov (United States)

Nelson, Mark; Gray, Kathelin; Allen, John P

2015-07-01

Successfully managing group dynamics of small, physically isolated groups is vital for long duration space exploration/habitation and for terrestrial CELSS (Controlled Environmental Life Support System) facilities with human participants. Biosphere 2 had important differences and shares some key commonalities with both Antarctic and space environments. There were a multitude of stress factors during the first two year closure experiment as well as mitigating factors. A helpful tool used at Biosphere 2 was the work of W.R. Bion who identified two competing modalities of behavior in small groups. Task-oriented groups are governed by conscious acceptance of goals, reality-thinking in relation to time and resources, and intelligent management of challenges. The opposing unconscious mode, the "basic-assumption" ("group animal") group, manifests through Dependency/Kill the Leader, Fight/Flight and Pairing. These unconscious dynamics undermine and can defeat the task group's goal. The biospherians experienced some dynamics seen in other isolated teams: factions developing reflecting personal chemistry and disagreements on overall mission procedures. These conflicts were exacerbated by external power struggles which enlisted support of those inside. Nevertheless, the crew evolved a coherent, creative life style to deal with some of the deprivations of isolation. The experience of the first two year closure of Biosphere 2 vividly illustrates both vicissitudes and management of group dynamics. The crew overrode inevitable frictions to creatively manage both operational and research demands and opportunities of the facility, thus staying 'on task' in Bion's group dynamics terminology. The understanding that Biosphere 2 was their life support system may also have helped the mission to succeed. Insights from the Biosphere 2 experience can help space and remote missions cope successfully with the inherent challenges of small, isolated crews. Copyright © 2015 The Committee on

Rewiring food systems to enhance human health and biosphere stewardship

Science.gov (United States)

Gordon, Line J.; Bignet, Victoria; Crona, Beatrice; Henriksson, Patrik J. G.; Van Holt, Tracy; Jonell, Malin; Lindahl, Therese; Troell, Max; Barthel, Stephan; Deutsch, Lisa; Folke, Carl; Jamila Haider, L.; Rockström, Johan; Queiroz, Cibele

2017-10-01

Food lies at the heart of both health and sustainability challenges. We use a social-ecological framework to illustrate how major changes to the volume, nutrition and safety of food systems between 1961 and today impact health and sustainability. These changes have almost halved undernutrition while doubling the proportion who are overweight. They have also resulted in reduced resilience of the biosphere, pushing four out of six analysed planetary boundaries across the safe operating space of the biosphere. Our analysis further illustrates that consumers and producers have become more distant from one another, with substantial power consolidated within a small group of key actors. Solutions include a shift from a volume-focused production system to focus on quality, nutrition, resource use efficiency, and reduced antimicrobial use. To achieve this, we need to rewire food systems in ways that enhance transparency between producers and consumers, mobilize key actors to become biosphere stewards, and re-connect people to the biosphere.

User's guide to the biosphere code ECOS

International Nuclear Information System (INIS)

Kane, P.; Thorne, M.C.

1984-10-01

This report constitutes the user's guide to the biosphere model ECOS and provides a detailed description of the processes modelled and mathematical formulations used. The FORTRAN code ECOS is an equilibrium-type compartmental biosphere code. ECOS was designed with the objective of producing a general but comprehensive code for use in the assessment of the radiological impact of unspecified geological repositories for radioactive waste. ECOS transforms the rate of release of activity from the geosphere to the rate of accumulation of weighted committed effective dose equivalent (dose). Both maximum individual dose (critical group dose) and collective dose rates may be computed. (author)

Ecology and exploration of the rare biosphere.

Science.gov (United States)

Lynch, Michael D J; Neufeld, Josh D

2015-04-01

The profound influence of microorganisms on human life and global biogeochemical cycles underlines the value of studying the biogeography of microorganisms, exploring microbial genomes and expanding our understanding of most microbial species on Earth: that is, those present at low relative abundance. The detection and subsequent analysis of low-abundance microbial populations—the 'rare biosphere'—have demonstrated the persistence, population dynamics, dispersion and predation of these microbial species. We discuss the ecology of rare microbial populations, and highlight molecular and computational methods for targeting taxonomic 'blind spots' within the rare biosphere of complex microbial communities.

Biosphere transport of radionuclides. First modelling by using a selected example

International Nuclear Information System (INIS)

Bundi, A.

1984-12-01

The dispersion of radionuclides in the biosphere and their uptake by man via various nutritional pathways is studied using a compartment model. The sample environment is the area of the lower Limmat and Aare valleys. General considerations of the compartmental description of the biosphere are made. The problem of the description of surface features, in particular soil, sediment and water, is studied in detail using the code BIOPATH. This study is intended to be an example of how a model of the biosphere could be constructed. It is shown that this is a reasonable model to calculate the spreading of radionuclides in the biosphere and that it indicates the relative significance of individual compartments, pathways and radionuclides. Calculated values of doses to man, however, should not be used as reference data for safety analyses. (author)

In-situ Planetary Subsurface Imaging System

Science.gov (United States)

Song, W.; Weber, R. C.; Dimech, J. L.; Kedar, S.; Neal, C. R.; Siegler, M.

2017-12-01

Geophysical and seismic instruments are considered the most effective tools for studying the detailed global structures of planetary interiors. A planet's interior bears the geochemical markers of its evolutionary history, as well as its present state of activity, which has direct implications to habitability. On Earth, subsurface imaging often involves massive data collection from hundreds to thousands of geophysical sensors (seismic, acoustic, etc) followed by transfer by hard links or wirelessly to a central location for post processing and computing, which will not be possible in planetary environments due to imposed mission constraints on mass, power, and bandwidth. Emerging opportunities for geophysical exploration of the solar system from Venus to the icy Ocean Worlds of Jupiter and Saturn dictate that subsurface imaging of the deep interior will require substantial data reduction and processing in-situ. The Real-time In-situ Subsurface Imaging (RISI) technology is a mesh network that senses and processes geophysical signals. Instead of data collection then post processing, the mesh network performs the distributed data processing and computing in-situ, and generates an evolving 3D subsurface image in real-time that can be transmitted under bandwidth and resource constraints. Seismic imaging algorithms (including traveltime tomography, ambient noise imaging, and microseismic imaging) have been successfully developed and validated using both synthetic and real-world terrestrial seismic data sets. The prototype hardware system has been implemented and can be extended as a general field instrumentation platform tailored specifically for a wide variety of planetary uses, including crustal mapping, ice and ocean structure, and geothermal systems. The team is applying the RISI technology to real off-world seismic datasets. For example, the Lunar Seismic Profiling Experiment (LSPE) deployed during the Apollo 17 Moon mission consisted of four geophone instruments

Reference biospheres for the long term safety assessment of radioactive waste disposal facilities

International Nuclear Information System (INIS)

Crossland, I.G.; Torres, C.

2002-01-01

Regulatory guidance on the safety assessment of radioactive waste disposals usually requires the consequences of any radionuclide releases to be considered in terms of their potential impact on human health. This requires consideration of the prevailing biosphere and the habits of the potentially exposed humans within it. However, it could take many thousands of years for migrating radionuclides to reach the surface environment. In these circumstances, an assessment model that was based on the present-day biosphere could be inappropriate while future biospheres would be unpredictable. These and other considerations suggest that a standardised, or reference biosphere, approach may be useful. Theme 1 of the IAEA BIOMASS project was established to develop the concept of reference biospheres into a practical system that can be applied to the assessment of the long term safety of geological disposal facilities for radioactive waste. The technical phase of the project lasted for four years until November 2000 and brought together disparate interests from many countries including waste disposal agencies, regulators and technical experts. Building on the experience from earlier BIOMOVS projects, a methodology was constructed for the logical and defensible construction of mathematical biosphere models that can be used in the total system performance assessment of radioactive waste disposal. The methodology was then further developed through the creation of a series of BIOMASS Example Reference Biospheres ('Examples'). These are stylised biosphere models that, in addition to illustrating the methodology, are intended to be useful assessment tools in their own right. (author)

Ecotourism and its effects on wildlife of Pachmarhi Biosphere Reserve

African Journals Online (AJOL)

use

“increase in international tourist arrivals from 25 million in. 1950 to 664 ... In its most basic sense, tourism can be ... sustainable use of wildlife in the Manu Biosphere ... ecotourism as it helps to educate people on the ... Sci. Technol. Table 1. Madai entrance to Pachmarhi Biosphere Reserve. .... in educational institutions.

Biosphere analyses for the safety assessment SR-Site - synthesis and summary of results

Energy Technology Data Exchange (ETDEWEB)

Saetre, Peter [comp.

2010-12-15

the site. The hydrodynamics in the coastal areas was characterized in the field and combined with the bathymetry of the future landscape to forecast the turnover of water in future coastal basins. The surface and near surface hydrology was described at the site and dynamic models were applied on the future landscape to predict vertical and horizontal transport under different climatic conditions. Historical and present human settlement at the site was used to characterize the utilisation of natural resources in a landscape perspective, and the productivity of food items was described and evaluated. The collection and analysis of multi-elemental chemistry data from different environmental media and a wide array of organisms were used to the estimate a unique parameter set describing sorption and biological uptake at the site. A continuous and iterative effort to improve the site characterisation and the site modelling during the investigations resulted in a refined collection of data, in parallel with detailed understanding of the processes that affects transport and accumulation in the surface ecosystems. This interdisciplinary and synchronously large scale collection and analysis of site data makes Forsmark one of the most extensively investigated sites used in risk or environmental assessments. By combining predicted discharge of deep groundwater from the repository and landscape geometries, the areas most likely to be affected by a potential release of radionuclides were identified and outlined, i.e. biosphere objects. The properties and temporal development of these discharge areas were described, developing from a coastal sea basin to a terrestrial ecosystem. The identified biosphere objects represent a considerable variation in size, timing of succession and object-specific properties. An ecosystem-based approach was used to dynamically model transport and accumulation of radionuclides in biosphere objects. The simulations with the model covered a 70,000 year

Community Assembly Processes of the Microbial Rare Biosphere.

Science.gov (United States)

Jia, Xiu; Dini-Andreote, Francisco; Falcão Salles, Joana

2018-03-14

Our planet teems with microorganisms that often present a skewed abundance distribution in a local community, with relatively few dominant species coexisting alongside a high number of rare species. Recent studies have demonstrated that these rare taxa serve as limitless reservoirs of genetic diversity, and perform disproportionate types of functions despite their low abundances. However, relatively little is known about the mechanisms controlling rarity and the processes promoting the development of the rare biosphere. Here, we propose the use of multivariate cut-offs to estimate rare species and phylogenetic null models applied to predefined rare taxa to disentangle the relative influences of ecoevolutionary processes mediating the assembly of the rare biosphere. Importantly, the identification of the factors controlling rare species assemblages is critical for understanding the types of rarity, how the rare biosphere is established, and how rare microorganisms fluctuate over spatiotemporal scales, thus enabling prospective predictions of ecosystem responses. Copyright © 2018 Elsevier Ltd. All rights reserved.

Lithosphere-biosphere interaction at a shallow-sea hydrothermal vent site; Hot Lake, Panarea, Italy

Science.gov (United States)

Huang, Chia-I.; Amann, Rudolf; Amend, Jan P.; Bach, Wolfgang; Brunner, Benjamin; Meyerdierks, Anke; Price, Roy E.; Schubotz, Florence; Summons, Roger; Wenzhöfer, Frank

2010-05-01

Deep-Sea hydrothermal systems are unique habitats for microbial life with primary production based on chemosynthesis and are considered to be windows to the subsurface biosphere. It is often overlooked, however, that their far more accessible shallow-sea counterparts are also valuable targets to study the effects of hydrothermal activity on geology, seawater chemistry and finally, on microbial life. Such an area of shallow marine hydrothermal venting is observed approximately 2.5 km east of Panarea Island (Sicily, Italy). This system is characterized by fluid temperatures of up to 135° C, gas emissions dominated by CO2 and precipitation of elemental sulfur on the seafloor. In an interdisciplinary project to investigate the influence of geofuels on marine microbiota, sediment cores and pore fluids were sampled for geological and geochemical analyses. An attempt was made to link these geochemical data with a characterization of the microbial community. One of the investigated sites (Lago Caldo, Hot Lake) is an oval-shaped (~10 by 6 meters) shallow (~2.5 m deep) depression covered by elemental sulfur. The sediments in this depression are strongly affected by hydrothermal activity: the pH of pore fluids is in a range between 5 and 6; the salinity is approximately two times higher than seawater. In situ temperatures of 36° C and 74° C (10 cm sediment depth) at two different locations within Hot Lake indicate variability in hydrothermal flux. The sediment surface layer is anoxic, and with increasing depth from the sediment-water interface, sulfate concentrations decrease from ~30 mM to less than 10 mM, whereas sulfide concentrations increase from less than 50 μm to ~1000 μm at 25 cm sediment depth, thus suggesting a higher potential for energy gain based on sulfur disequilibrium. As indicated by the variability in the sediment temperatures at 10 cm, fluid fluxes and mixing with seawater is not found to be uniform at Hot Lake. This is reflected in variability of the

A biosphere model for use in the SKI Project SITE-94

International Nuclear Information System (INIS)

Barrdahl, R.A.G.

1995-04-01

A simple biosphere model has been designed for use in the SKI Project SITE-94 related to a hypothetical repository for spent nuclear fuel on the island of Aespoe near Oskarshamn in southern Sweden. The model provides results in terms of radiation dose per Bq/y, unless otherwise indicated, and results will thus have to be scaled with actual flux of radionuclides per year entering the primary biosphere recipients. The model does not include radioactive decay as there is assumed no delay in the model system, except for where explicitly mentioned. Specifically, no radioactive transitions resulting in daughter nuclides are considered. Calculated yearly individual and population committed (50 years) radiation doses to man are expressed in terms of Sv/y and radiation dose rates to fish are expressed as mSv/h. Calculated radiation doses resulting from the present biosphere model are hypothetical, and should under no circumstances be considered as real. Neither should they be used as quantitative information for decision purposes. The biosphere model is of a rough and primitive character and its precision, relative to the real biosphere in the surroundings of Aespoe is envisaged to be several orders of magnitude

The biosphere today and tomorrow in the SFR area

Energy Technology Data Exchange (ETDEWEB)

Kautsky, Ulrik (ed.)

2001-06-01

This report is a compilation of the work done mainly in the SAFE project for the biosphere from about 14 reports. The SAFE project is the updated safety analysis of SFR-1, the LLW and ILW repository at Forsmark. The aim of the report is to summarize the available information about the present-day biosphere in the area surrounding SFR and to use this information, together with information about the previous development of the biosphere, to predict the future development of the area in a more comparable way than the underlying reports. The data actually used for the models have been taken from the original reports which also justify or validate the data. The report compiles information about climate, oceanography, landscape, sedimentation, shoreline displacement, marine, lake and terrestrial ecosystems.

The biosphere today and tomorrow in the SFR area

International Nuclear Information System (INIS)

Kautsky, Ulrik

2001-06-01

This report is a compilation of the work done mainly in the SAFE project for the biosphere from about 14 reports. The SAFE project is the updated safety analysis of SFR-1, the LLW and ILW repository at Forsmark. The aim of the report is to summarize the available information about the present-day biosphere in the area surrounding SFR and to use this information, together with information about the previous development of the biosphere, to predict the future development of the area in a more comparable way than the underlying reports. The data actually used for the models have been taken from the original reports which also justify or validate the data. The report compiles information about climate, oceanography, landscape, sedimentation, shoreline displacement, marine, lake and terrestrial ecosystems

Assessing the High Temperature, High Pressure Subsurface for Anaerobic Methane Oxidation

Science.gov (United States)

Harris, R. L.; Bartlett, D.; Byrnes, A. W.; Walsh, K. M.; Lau, C. Y. M.; Onstott, T. C.

2017-12-01

The anaerobic oxidation of methane (AOM) is an important sink in the global methane (CH4) budget. ANMEs are known to oxidize CH4 either independently or in consortia with bacteria, coupling the reduction of electron acceptors such as, SO42-, NO2-, NO3-, Mn4+, or Fe3+. To further constrain the contribution of AOM to the global CH4 budget, it is important to assess unexplored environments where AOM is thermodynamically possible such as the high pressure, high temperature deep biosphere. Provided plausible electron acceptor availability, increased temperature and pCH4 yield favorable Gibbs free energies for AOM reactions and the production of ATP (Fig. 1). To date, only sulfate-dependent AOM metabolism has been documented under high temperature conditions (50-72˚C), and AOM has not been assessed above 10.1 MPa. Given that ANMEs share close phylogenetic and metabolic heritage with methanogens and that the most heat-tolerant microorganism known is a barophilic methanogen, there possibly exist thermophilic ANMEs. Here we describe preliminary results from high pressure, high temperature stable isotope tracer incubation experiments on deep biosphere samples. Deep sub-seafloor sediments collected by IODP 370 from the Nankai Trough (257 - 865 m below seafloor) and deep fracture fluid from South Africa (1339 m below land surface) were incubated anaerobically in hydrostatic pressure vessels at 40 MPa in simulated in situ temperatures (40˚ - 80˚C). Sediments and fracture fluid were incubated in sulfate-free artificial seawater, a 2:98 13CH4:N2 headspace, and treated with one of the potential electron acceptors listed above in addition to kill and endogenous activity (i.e. no added electron acceptor) controls. Stable isotope analysis of dissolved inorganic carbon (DIC) suggests that AOM occurred within 60 days of incubation for all investigated electron acceptors and temperatures except 50˚C. Sulfate-dependent AOM rates are consistent with those previously reported in the

Human aspirations, environmental care, and the much-needed World Decade of the Biosphere

Energy Technology Data Exchange (ETDEWEB)

1982-04-01

An editorial dealing with a world-wide need to support a common cause such as the maintenance of our biosphere as our home and planetary life-support is presented. The planned World Decade of the Biosphere which is intended to inform and educate people throughout the world about the biosphere and man's relationship to it is discussed. (KRM)

Biosphere analyses for the safety assessment SR-Site - synthesis and summary of results

International Nuclear Information System (INIS)

Saetre, Peter

2010-12-01

the site. The hydrodynamics in the coastal areas was characterized in the field and combined with the bathymetry of the future landscape to forecast the turnover of water in future coastal basins. The surface and near surface hydrology was described at the site and dynamic models were applied on the future landscape to predict vertical and horizontal transport under different climatic conditions. Historical and present human settlement at the site was used to characterize the utilisation of natural resources in a landscape perspective, and the productivity of food items was described and evaluated. The collection and analysis of multi-elemental chemistry data from different environmental media and a wide array of organisms were used to the estimate a unique parameter set describing sorption and biological uptake at the site. A continuous and iterative effort to improve the site characterisation and the site modelling during the investigations resulted in a refined collection of data, in parallel with detailed understanding of the processes that affects transport and accumulation in the surface ecosystems. This interdisciplinary and synchronously large scale collection and analysis of site data makes Forsmark one of the most extensively investigated sites used in risk or environmental assessments. By combining predicted discharge of deep groundwater from the repository and landscape geometries, the areas most likely to be affected by a potential release of radionuclides were identified and outlined, i.e. biosphere objects. The properties and temporal development of these discharge areas were described, developing from a coastal sea basin to a terrestrial ecosystem. The identified biosphere objects represent a considerable variation in size, timing of succession and object-specific properties. An ecosystem-based approach was used to dynamically model transport and accumulation of radionuclides in biosphere objects. The simulations with the model covered a 70,000 year

Sensitivity analysis of biospheric behaviour of radionuclides released from nuclear waste repositories

International Nuclear Information System (INIS)

Korhonen, R.; Savolainen, I.; Suolanen, V.

1985-01-01

Sensitivity studies of biospheric behaviour of radionuclides released from a planned spent nuclear fuel repository are performed. Sensitivity of radionuclide concentrations in biosphere and that of radiation doses to solubility of nuclides, to sedimentation rate and to intercompartmental water exchange are studied. Solubility has pronounced effect on the sedimentation on the local scale, and in general, sediment sinks were found to be of major importance in the biospheric behaviour of radionuclides. (author)

Ecuador's YasunI Biosphere Reserve: a brief modern history and conservation challenges

Energy Technology Data Exchange (ETDEWEB)

Finer, Matt [Save America' s Forests, Washington, DC (United States); Vijay, Varsha; Jenkins, Clinton N [Duke University, Durham, NC (United States); Ponce, Fernando [Ciudadanos por la Democracia, Quito (Ecuador); Kahn, Ted R, E-mail: matt@saveamericasforests.or [Neotropical Conservation Foundation, Washington, DC (United States)

2009-07-15

Ecuador's YasunI Man and the Biosphere Reserve-located at the intersection of the Amazon, the Andes mountains, and the equator-is home to extraordinary biodiversity and a recently contacted Amazonian indigenous group known as the Waorani (or Huaorani). Relatives of the Waorani, the Tagaeri and Taromenane, still live in voluntary isolation deep in the reserve, with no peaceful contact with the outside world. The YasunI Biosphere Reserve also sits atop large reserves of crude oil, Ecuador's chief export, and contains an abundance of valuable timber species. This volatile combination has led to intense conflicts, and subsequently, increased international interest and concern. To make the issues confronting YasunI more accessible to a growing audience of interested parties, we synthesized information on the biological, social, and political issues of the region, providing a concise overview of its modern history and conservation challenges. We constructed a chronology of key events in the YasunI region over the past century and a series of maps designed to guide readers to a better understanding of the area's complicated array of overlapping designations. Main topics of analysis and discussion include: the Waorani and their ancestors living in voluntary isolation, YasunI National Park, illegal logging, missionary impacts, oil-development-related impacts and conflicts, and the Ecuadorian government's innovative YasunI-ITT Initiative (ITT: Ishpingo-Tiputini-Tambococha).

Data management at Biosphere 2 center

Science.gov (United States)

McCreary, Leone F.

1997-01-01

Throughout the history of Biosphere 2, the collecting and recording of biological data has been sporadic. Currently no active effort to administer and record regular biological surveys is being made. Also, there is no central location, such as an on-site data library, where all records from various studies have been archived. As a research institute, good, complete data records are at the core of all Biosphere 2's scientific endeavors. It is therefore imperative that an effective data management system be implemented within the management and research departments as soon as possible. Establishing this system would require three general phases: (1) Design/implement a new archiving/management program (including storage, cataloging and retrieval systems); (2) Organize and input baseline and intermediate data from existing archives; and (3) Maintain records by inputting new data.

Biosphere processes affecting environmnetal impacts of hazardous wastes

International Nuclear Information System (INIS)

Watkins, B.; Broderick, M.

1991-01-01

ANS Consultants Limited has reviewed and assessed a number of biosphere processes which affect the environmental impact of hazardous waste disposal. Processes examined have included the long-term effects of climate change on biosphere characteristics and the transport of toxic materials in food chains; the role of soil animals and plants roots in cycling elements from depth to the soil surface; volatisation mechanisms; the transport of elements in soil with particular reference to erosion and resuspension; mechanisms for foliar contamination via irrigation waters; and organic matter decomposition in varying environmental conditions. (au)

Some viewpoints on reference biospheres in Finnish performance assessments

International Nuclear Information System (INIS)

Rasilainen, K.; Kattilakoski, E.; Suolanen, V.; Vieno, T.; Vuori, S.

2002-01-01

Viewpoints are presented concerning biosphere studies in performance assessments of nuclear waste disposal. The points are based on experiences from several Finnish performance assessments. The latest performance assessment for spent fuel disposal, TILA-99, was considered in the Decision in Principle process for the site selection of the repository. The points given are also based on experiences from participation in international projects dealing with biosphere modelling, for instance BIOMOVS and BIOMASS. (author)

Application of the Biosphere Assessment Methodology to the ENRESA, 1997 Performance and Safety Assessment

International Nuclear Information System (INIS)

Pinedo, P.; Simon, I.; Aguero, A.

1998-01-01

For several years CIEMAT has been developing for ENRESA knowledge and tools to support the modelling of the migration and accumulation of radionuclides within the biosphere once those radionuclides are released or reach one or more parts of the biosphere (atmosphere, water bodies or soils). The model development also includes evaluation of radiological impacts arising from the resulting distribution of radionuclides in the biosphere. In 1996, a Methodology to analyse the biosphere in this context proposed to ENRESA. The level of development of the different aspects proposed within the Methodology was quite heterogeneous and, while aspects of radionuclide transport modelling were already well developed in theoretical and practical terms, other aspects like the procedure for conceptual model development and the description of biosphere system representatives of the long term needed further developments. At present, the International Atomic Energy Agency (IAEA) Programme on Biosphere Modelling and Assessment (BIOMASS) in collaboration with several national organizations, ENRESA and CIEMAT among them, is working to complete and augment the Reference Biosphere Methodology and to produce some practical descriptions of Reference Systems. The overall purpose of this document is to apply the Methodology, taking account of on-going developments in biosphere modelling, to the last performance assessment (PA) exercise made by ENRESA (ENRESA, 1997), using from it the general and particular information about the assessment context, radionuclide information, geosphere and geobiosphere interface data. There are three particular objectives to this work: (a) to determine the practicability of the Methodology in an application to a realistic assessment situation, (b) To compare and contrast previous biosphere modelling in HLW PA and, (c) to test software development related with data management and modelling. (Author) 42 refs

Post-closure biosphere assessment modelling: comparison of complex and more stylised approaches.

Science.gov (United States)

Walke, Russell C; Kirchner, Gerald; Xu, Shulan; Dverstorp, Björn

2015-10-01

Geological disposal facilities are the preferred option for high-level radioactive waste, due to their potential to provide isolation from the surface environment (biosphere) on very long timescales. Assessments need to strike a balance between stylised models and more complex approaches that draw more extensively on site-specific information. This paper explores the relative merits of complex versus more stylised biosphere models in the context of a site-specific assessment. The more complex biosphere modelling approach was developed by the Swedish Nuclear Fuel and Waste Management Co (SKB) for the Formark candidate site for a spent nuclear fuel repository in Sweden. SKB's approach is built on a landscape development model, whereby radionuclide releases to distinct hydrological basins/sub-catchments (termed 'objects') are represented as they evolve through land rise and climate change. Each of seventeen of these objects is represented with more than 80 site specific parameters, with about 22 that are time-dependent and result in over 5000 input values per object. The more stylised biosphere models developed for this study represent releases to individual ecosystems without environmental change and include the most plausible transport processes. In the context of regulatory review of the landscape modelling approach adopted in the SR-Site assessment in Sweden, the more stylised representation has helped to build understanding in the more complex modelling approaches by providing bounding results, checking the reasonableness of the more complex modelling, highlighting uncertainties introduced through conceptual assumptions and helping to quantify the conservatisms involved. The more stylised biosphere models are also shown capable of reproducing the results of more complex approaches. A major recommendation is that biosphere assessments need to justify the degree of complexity in modelling approaches as well as simplifying and conservative assumptions. In light of

Biosphere modeling in waste disposal safety assessments -- An example using the terrestrial-aquatic model of the environment

International Nuclear Information System (INIS)

Klos, R.A.

1998-01-01

Geological disposal of radioactive wastes is intended to provide long-term isolation of potentially harmful radionuclides from the human environment and the biosphere. The long timescales involved pose unique problems for biosphere modeling because there are considerable uncertainties regarding the state of the biosphere into which releases might ultimately occur. The key to representing the biosphere in long-timescale assessments is the flexibility with which those aspects of the biosphere that are of relevance to dose calculations are represented, and this comes from the way in which key biosphere features, events, and processes are represented in model codes. How this is done in contemporary assessments is illustrated by the Terrestrial-Aquatic Model of the Environment (TAME), an advanced biosphere model for waste disposal assessments recently developed in Switzerland. A numerical example of the release of radionuclides from a subterranean source to an inland valley biosphere is used to illustrate how biosphere modeling is carried out and the practical ways in which meaningful quantitative results can be achieved. The results emphasize the potential for accumulation of radionuclides in the biosphere over long timescales and also illustrate the role of parameter values in such modeling

Application of a generic biosphere model for dose assessments to five European sites

International Nuclear Information System (INIS)

Chen, Q; Kowe, R; Mobbs, S F; Proehl, G; Olyslaegers, G; Zeevaert, T; Kanyar, B; Pinedo, P; Simon, I; Bergstroem, U; Hallberg, B; Jones, J A; Oatway, W B; Watson, S J

2006-01-01

The BIOMOSA (BIOsphere MOdels for Safety Assessment of radioactive waste disposal) project was part of the EC fifth framework research programme. The main goal of this project was to improve the scientific basis for the application of biosphere models in the framework of long-term safety studies of radioactive waste disposal facilities and to enhance the confidence in using biosphere models for performance assessments. The study focused on the development and application of a generic biosphere tool BIOGEM (BIOsphere GEneric Model) using the IAEA BIOMASS reference biosphere methodology, and the comparison between BIOGEM and five site-specific biosphere models. The site-specific models and the generic model were applied to five typical locations in Europe, resulting in estimates of the annual effective individual doses to the critical groups and the ranking of the importance of the exposure pathways for each of the sites. Uncertainty in the results was also estimated by means of stochastic calculations based on variation of the site-specific parameter values. This paper describes the generic model and the deterministic and stochastic results obtained when it was applied to the five sites. Details of the site-specific models and the corresponding results are described in two companion papers. This paper also presents a comparison of the results between the generic model and site-specific models. In general, there was an acceptable agreement of the BIOGEM for both the deterministic and stochastic results with the results from the site-specific models

The life span of the biosphere revisited

Science.gov (United States)

Caldeira, Ken; Kasting, James F.

1992-01-01

How much longer the biosphere can survive on earth is reexamined using a more elaborate model than that of Lovelock and Whitfield (1982). The model includes a more accurate treatment of the greenhouse effect of CO2, a biologically mediated weathering parametrization, and the realization that C4 photosynthesis can persist to much lower concentrations of atmospheric CO2. It is found that a C4-plant-based biosphere could survive for at least another 0.9 Gyr to 1.5 Gyr after the present time, depending respectively on whether CO2 or temperature is the limiting factor. Within an additional 1 Gyr, earth may lose water to space, thereby following the path of Venus.

Evaluation of Features, Events, and Processes (FEP) for the Biosphere Model

International Nuclear Information System (INIS)

Wasiolek, M. A.

2003-01-01

The purpose of this report is to document the evaluation of biosphere features, events, and processes (FEPs) that relate to the license application (LA) process as required by the U.S. Nuclear Regulatory Commission (NRC) regulations at 10 CFR 63.114 (d, e, and f) [DIRS 156605]. The evaluation determines whether specific biosphere-related FEPs should be included or excluded from consideration in the Total System Performance Assessment (TSPA). This analysis documents the technical basis for screening decisions as required at 10 CFR 63.114 (d, e, and f) [DIRS 156605]. For FEPs that are included in the TSPA, this analysis provides a TSPA disposition, which summarizes how the FEP has been included and addressed in the TSPA model, and cites the analysis reports and model reports that provide the technical basis and description of its disposition. For FEPs that are excluded from the TSPA, this analysis report provides a screening argument, which identifies the basis for the screening decision (i.e., low probability, low consequence, or by regulation) and discusses the technical basis that supports that decision. In cases, where a FEP covers multiple technical areas and is shared with other FEP analysis reports, this analysis may provide only a partial technical basis for the screening of the FEP. The full technical basis for these shared FEPs is addressed collectively by all FEP analysis reports that cover technical disciplines sharing a FEP. FEPs must be included in the TSPA unless they can be excluded by low probability, low consequence, or regulation. A FEP can be excluded from the TSPA by low probability per 10 CFR 63.114(d) [DIRS 156605], by showing that it has less than one chance in 10,000 of occurring over 10,000 years (or an approximately equivalent annualized probability of 10 -8 ). A FEP can be excluded from the TSPA by low consequence per 10 CFR 63.114 (e or f) [DIRS 156605], by showing that omitting the FEP would not significantly change the magnitude and

Isoprenoid quinones resolve the stratification of microbial redox processes in a biogeochemical continuum from the photic zone to deep anoxic sediments of the Black Sea.

Science.gov (United States)

Becker, Kevin W; Elling, Felix J; Schröder, Jan M; Lipp, Julius S; Goldhammer, Tobias; Zabel, Matthias; Elvert, Marcus; Overmann, Jörg; Hinrichs, Kai-Uwe

2018-03-09

The stratified water column of the Black Sea serves as a model ecosystem for studying the interactions of microorganisms with major biogeochemical cycles. Here we provide detailed analysis of isoprenoid quinones to study microbial redox processes in the ocean. In a continuum from the photic zone through the chemocline into deep anoxic sediments of the southern Black Sea, diagnostic quinones and inorganic geochemical parameters indicate niche segregation between redox processes and corresponding shifts in microbial community composition. Quinones specific for oxygenic photosynthesis and aerobic respiration dominate oxic waters, while quinones associated with thaumarchaeal ammonia-oxidation and bacterial methanotrophy, respectively, dominate a narrow interval in suboxic waters. Quinone distributions indicate highest metabolic diversity within the anoxic zone, with anoxygenic photosynthesis being a major process in its photic layer. In the dark anoxic layer, quinone profiles indicate occurrence of bacterial sulfur and nitrogen cycling, archaeal methanogenesis, and archaeal methanotrophy. Multiple novel ubiquinone isomers, possibly originating from unidentified intra-aerobic anaerobes, occur in this zone. The respiration modes found in the anoxic zone continue into shallow subsurface sediments, but quinone abundances rapidly decrease within the upper 50 cm below sea floor, reflecting the transition to lower energy availability. In the deep subseafloor sediments, quinone distributions and geochemical profiles indicate archaeal methanogenesis/methanotrophy and potentially bacterial fermentative metabolisms. We observed that sedimentary quinone distributions track lithology, which supports prior hypotheses that deep biosphere community composition and metabolisms are determined by environmental conditions during sediment deposition. Importance Microorganisms play crucial roles in global biogeochemical cycles. Yet, we have only a fragmentary understanding of the diversity

Overall strategy for management of parameters and data in the biosphere assessment portfolio

International Nuclear Information System (INIS)

Hjerpe, T.

2006-12-01

Throughout the biosphere assessment, the parameters selected to represent the present and future biosphere and choices of data values are crucial issues, greatly affecting the end result. The necessity of clear strategy for managing parameters and data is obvious; how to handle the variability of parameters as such, the selection from different sources, the derivation of values of model parameters not readily available, storage of the data in a proper manner, and assuring the quality throughout the whole assessment programme. In this working report a proposed set of broad guidelines for the overall strategy for the management of parameters and data in the biosphere assessment strategy is first presented. Thereafter, a scheme is proposed for assuring the knowledge quality of data. Finally, a proposal for requirements and management of the biosphere assessment database and the current status of the on-going work building the biosphere assessment database and interfaces to other tools are presented. (orig.)

Herpetofauna of the Camili Biosphere Rezerve Area (Borçka, Artvin, Turkey

Directory of Open Access Journals (Sweden)

Murat AFSAR

2011-03-01

Full Text Available In this study, 15 amphibian and reptile species were recorded from 12 different localities in the Camili Biosphere Reserve, known as the first biosphere site of Turkey. Two of these species are Urodelan, four are Anuran, four are Lacertilia and five are Ophidia. Two black coloured specimens belongs to Natrix genus collected from biosphere rezerv area are compered with literature data belongs to N. megalocephala. Moreover, the population and habitat status of threatened species were investigated, required conservation measures were explained.

Use of the method of biosphere compatibility for the assessment of environmental protection methods

Science.gov (United States)

Vorobyov, Sergey

2018-01-01

The article is devoted to the question of using the indicator of biosphere compatibility for assessing the effectiveness of environmental protection methods. The indicator of biosphere compatibility was proposed by the vice-president of RAASN (Russian Academy of Architecture and Building Sciences), Doctor of Technical Sciences, Professor V.I. Ilyichev. This indicator is allows not only qualitatively but also quantitatively to assess the degree of development of urban urban areas, from the standpoint of preserving the biosphere in urban ecosystems while realizing the city’s main functions. The integral indicator of biosphere compatibility is allows us to assess not only the current ecological situation in the territory under consideration, but also to plan the forecast of its changes for building the new construction projects, or for reconstructing existing ones. The indicator of biosphere compatibility, which is a mathematical expression of the tripartite balance (technosphere, biosphere and population of this area), is allows us to quantify the degree of effectiveness of different method of protecting the environment for choose the most effective for these conditions.

Application of Biosphere Compatibility Indicator for Assessment of the Effectiveness of Environmental Protection Methods

Science.gov (United States)

Bakaeva, N. V.; Vorobyov, S. A.; Chernyaeva, I. V.

2017-11-01

The article is devoted to the issue of using the biosphere compatibility indicator to assess the effectiveness of environmental protection methods. The indicator biosphere compatibility was proposed by the vice-president of RAASN (Russian Academy of Architecture and Building Sciences), Doctor of Technical Sciences, Professor V.I. Ilyichev. This indicator allows one to assess not only qualitatively but also quantitatively the degree of urban areas development from the standpoint of preserving the biosphere in urban ecosystems while performing the city’s main functions. The integral biosphere compatibility indicator allows us to assess not only the current ecological situation in the territory under consideration but also to plan the forecast of its changes for the new construction projects implementation or for the reconstruction of the existing ones. The biosphere compatibility indicator, which is a mathematical expression of the tripartite balance (technosphere, biosphere and population of this area), allows us to quantify the effectiveness degree of different methods for environment protection to choose the most effective one under these conditions.

Russian biosphere reserves at the youth MAB-2017 Forum in Italy

Directory of Open Access Journals (Sweden)

Elena A. Shuyskaya

2018-02-01

Full Text Available Russia was represented by 9 participants from Biosphere Reserves at the MAB Youth Forum in Italy. The main question of the Forum was «How to involve the young in the work of biosphere reserves?» The debate resulted in a Declaration, elaborated by participants from around the world (282 delegates from 85 countries. Measures to improve scientific cooperation, data exchange in the sphere of educational tourism and administrative management, development of joint projects in environmental education were formulated. The article contains a number of recommendations for the network of biosphere reserves in Russia, based on Seville strategy and Lima Action Plan.

Molecular hydrogen: An abundant energy source for bacterial activity in nuclear waste repositories

International Nuclear Information System (INIS)

Libert, M.; Bildstein, O.; Esnault, L.; Jullien, M.; Sellier, R.

2011-01-01

A thorough understanding of the energy sources used by microbial systems in the deep terrestrial subsurface is essential since the extreme conditions for life in deep biospheres may serve as a model for possible life in a nuclear waste repository. In this respect, H 2 is known as one of the most energetic substrates for deep terrestrial subsurface environments. This hydrogen is produced from abiotic and biotic processes but its concentration in natural systems is usually maintained at very low levels due to hydrogen-consuming bacteria. A significant amount of H 2 gas will be produced within deep nuclear waste repositories, essentially from the corrosion of metallic components. This will consequently improve the conditions for microbial activity in this specific environment. This paper discusses different study cases with experimental results to illustrate the fact that microorganisms are able to use hydrogen for redox processes (reduction of O 2 , NO 3- , Fe III) in several waste disposal conditions. Consequences of microbial activity include: alteration of groundwater chemistry and shift in geochemical equilibria, gas production or consumption, bio-corrosion, and potential modifications of confinement properties. In order to quantify the impact of hydrogen bacteria, the next step will be to determine the kinetic rate of the reactions in realistic conditions. (authors)

Molecular hydrogen: An abundant energy source for bacterial activity in nuclear waste repositories

Science.gov (United States)

Libert, M.; Bildstein, O.; Esnault, L.; Jullien, M.; Sellier, R.

A thorough understanding of the energy sources used by microbial systems in the deep terrestrial subsurface is essential since the extreme conditions for life in deep biospheres may serve as a model for possible life in a nuclear waste repository. In this respect, H 2 is known as one of the most energetic substrates for deep terrestrial subsurface environments. This hydrogen is produced from abiotic and biotic processes but its concentration in natural systems is usually maintained at very low levels due to hydrogen-consuming bacteria. A significant amount of H 2 gas will be produced within deep nuclear waste repositories, essentially from the corrosion of metallic components. This will consequently improve the conditions for microbial activity in this specific environment. This paper discusses different study cases with experimental results to illustrate the fact that microorganisms are able to use hydrogen for redox processes (reduction of O 2, NO3-, Fe III) in several waste disposal conditions. Consequences of microbial activity include: alteration of groundwater chemistry and shift in geochemical equilibria, gas production or consumption, biocorrosion, and potential modifications of confinement properties. In order to quantify the impact of hydrogen bacteria, the next step will be to determine the kinetic rate of the reactions in realistic conditions.

Geosphere-Biosphere interface zone: the role of vegetation in water and element exchanges

International Nuclear Information System (INIS)

Vincke, C.

2007-01-01

The forest tree vegetation, because of its longevity and high evaporative capacity, has a great influence on the water cycling: it can transpire about 80% of the potential evapotranspiration (PET, mm) under high evaporative demand. The presence of a shallow water table increases the water's availability to root uptake from deep layers. In the scenario of a water table polluted with radionuclides, identifying the sources of water used by the forest vegetation (precipitation vs groundwater) is necessary to correctly predict the rhythm at which radionuclides will be absorbed by trees and further recycled into biosphere. This study aims at understanding and quantifying the forest vegetation and water table interactions. Through the soil-tree-atmosphere continuum, the water fluxes were monitored in parallel to the element cycle, the biomass compartments and the ecophysiological response of a Scots pine stand during 2005 growing season

Succession in the petroleum reservoir microbiome through an oil field production lifecycle.

Science.gov (United States)

Vigneron, Adrien; Alsop, Eric B; Lomans, Bartholomeus P; Kyrpides, Nikos C; Head, Ian M; Tsesmetzis, Nicolas

2017-09-01

Subsurface petroleum reservoirs are an important component of the deep biosphere where indigenous microorganisms live under extreme conditions and in isolation from the Earth's surface for millions of years. However, unlike the bulk of the deep biosphere, the petroleum reservoir deep biosphere is subject to extreme anthropogenic perturbation, with the introduction of new electron acceptors, donors and exogenous microbes during oil exploration and production. Despite the fundamental and practical significance of this perturbation, there has never been a systematic evaluation of the ecological changes that occur over the production lifetime of an active offshore petroleum production system. Analysis of the entire Halfdan oil field in the North Sea (32 producing wells in production for 1-15 years) using quantitative PCR, multigenic sequencing, comparative metagenomic and genomic bins reconstruction revealed systematic shifts in microbial community composition and metabolic potential, as well as changing ecological strategies in response to anthropogenic perturbation of the oil field ecosystem, related to length of time in production. The microbial communities were initially dominated by slow growing anaerobes such as members of the Thermotogales and Clostridiales adapted to living on hydrocarbons and complex refractory organic matter. However, as seawater and nitrate injection (used for secondary oil production) delivered oxidants, the microbial community composition progressively changed to fast growing opportunists such as members of the Deferribacteres, Delta-, Epsilon- and Gammaproteobacteria, with energetically more favorable metabolism (for example, nitrate reduction, H 2 S, sulfide and sulfur oxidation). This perturbation has profound consequences for understanding the microbial ecology of the system and is of considerable practical importance as it promotes detrimental processes such as reservoir souring and metal corrosion. These findings provide a new

The ability of microbial community of Lake Baikal bottom sediments associated with gas discharge to carry out the transformation of organic matter under thermobaric conditions

Directory of Open Access Journals (Sweden)

Sergei Viktorovich Bukin

2016-05-01

Full Text Available The ability to compare the composition and metabolic potential of microbial communities inhabiting the subsurface sediment in geographically distinct locations is one of the keys to understanding the evolution and function of the subsurface biosphere. Prospective areas for study of the subsurface biosphere are the sites of hydrocarbon discharges on the bottom of the Lake Baikal rift, where ascending fluxes of gas-saturated fluids and oil from deep layers of bottom sediments seep into near-surface sediment. The samples of surface sediments collected in the area of the Posolskaya Bank methane seep were cultured for 17 months under thermobaric conditions (80°С, 5 MPa with the addition of complementary organic substrate, and a different composition for the gas phase. After incubation, the presence of intact cells of microorganisms, organic matter transformation and the formation of oil biomarkers was confirmed in the samples, with the addition of Baikalian diatom alga Synedra acus detritus, and gas mixture СH4:H2:CO2. Taxonomic assignment of the 16S rRNA sequence data indicates that the predominant sequences in the enrichment were Sphingomonas (55.3%, Solirubrobacter (27.5% and Arthrobacter (16.6%. At the same time, in heat-killed sediment and in sediment without any additional substrates, which were cultivated in a CH4 atmosphere, no geochemical changes were detected, nor the presence of intact cells and 16S rRNA sequences of Bacteria and Archaea. This data may suggest that the decomposition of organic matter under culturing conditions could be performed by microorganisms from low-temperature sediment layers. One possible explanation of this phenomenon is migration of the representatives of the deep thermophilic community through fault zones in the near surface sediment layers, together with gas-bearing fluids.

Subsurface Contamination Control

Energy Technology Data Exchange (ETDEWEB)

Y. Yuan

2001-12-12

There are two objectives of this report, ''Subsurface Contamination Control''. The first is to provide a technical basis for recommending limiting radioactive contamination levels (LRCL) on the external surfaces of waste packages (WP) for acceptance into the subsurface repository. The second is to provide an evaluation of the magnitude of potential releases from a defective WP and the detectability of the released contents. The technical basis for deriving LRCL has been established in ''Retrieval Equipment and Strategy for Wp on Pallet'' (CRWMS M and O 2000g, 6.3.1). This report updates the derivation by incorporating the latest design information of the subsurface repository for site recommendation. The derived LRCL on the external surface of WPs, therefore, supercede that described in CRWMS M and O 2000g. The derived LRCL represent the average concentrations of contamination on the external surfaces of each WP that must not be exceeded before the WP is to be transported to the subsurface facility for emplacement. The evaluation of potential releases is necessary to control the potential contamination of the subsurface repository and to detect prematurely failed WPs. The detection of failed WPs is required in order to provide reasonable assurance that the integrity of each WP is intact prior to MGR closure. An emplaced WP may become breached due to manufacturing defects or improper weld combined with failure to detect the defect, by corrosion, or by mechanical penetration due to accidents or rockfall conditions. The breached WP may release its gaseous and volatile radionuclide content to the subsurface environment and result in contaminating the subsurface facility. The scope of this analysis is limited to radioactive contaminants resulting from breached WPs during the preclosure period of the subsurface repository. This report: (1) documents a method for deriving LRCL on the external surfaces of WP for acceptance into the

Database for radionuclide transport in the biosphere

International Nuclear Information System (INIS)

Jiskra, J.

1985-01-01

The biosphere model is the final link in the chain of radionuclide transport models, used for radiation dose calculations from high level waste repositories. This report presents the data needed for biosphere calculations and discusses them where necessary. The first part is dedicated to the nuclide specific parameters like distribution coefficients (water - soil), concentration ratios (soil - plant) and distribution factors (for milk, meat etc.) which are reported in the literature. The second part contains the choice of regions, their division into compartments and the discussion of nutritional habits for man and animals. At the end a theoretical population for each region is estimated based on the consumption rates and on the yield of agricultural products, assuming an autonomous nutrition. (Auth.)

Evaluation of Features, Events, and Processes (FEP) for the Biosphere Model

International Nuclear Information System (INIS)

J. J. Tappen

2003-01-01

The purpose of this revision of ''Evaluation of the Applicability of Biosphere-Related Features, Events, and Processes (FEPs)'' (BSC 2001) is to document the screening analysis of biosphere-related primary FEPs, as identified in ''The Development of Information Catalogued in REV00 of the YMP FEP Database'' (Freeze et al. 2001), in accordance with the requirements of the final U.S. Nuclear Regulatory Commission (NRC) regulations at 10 CFR Part 63. This database is referred to as the Yucca Mountain Project (YMP) FEP Database throughout this document. Those biosphere-related primary FEPs that are screened as applicable will be used to develop the conceptual model portion of the biosphere model, which will in turn be used to develop the mathematical model portion of the biosphere model. As part of this revision, any reference to the screening guidance or criteria provided either by Dyer (1999) or by the proposed NRC regulations at 64 FR 8640 has been removed. The title of this revision has been changed to more accurately reflect the purpose of the analyses. In addition, this revision will address Item Numbers 19, 20, 21, 25, and 26 from Attachment 2 of ''U.S. Nuclear Regulatory Commission/U.S. Department of Energy Technical Exchange and Management Meeting on Total System Performance Assessment and Integration (August 6 through 10, 2001)'' (Reamer 2001). This Scientific Analysis Report (SAR) does not support the current revision to the YMP FEP Database (Freeze et al. 2001). Subsequent to the release of the YMP FEP Database (Freeze et al. 2001), a series of reviews was conducted on both the FEP processes used to support Total System Performance Assessment for Site Recommendation and to develop the YMP FEP Database. In response to observations and comments from these reviews, particularly the NRC/DOE TSPA Technical Exchange in August 2001 (Reamer 2001), several Key Technical Issue (KTI) Agreements were developed. ''The Enhanced Plan for Features, Events and Processes

Evaluation of Features, Events, and Processes (FEP) for the Biosphere Model

Energy Technology Data Exchange (ETDEWEB)

M. A. Wasiolek

2003-10-09

The purpose of this report is to document the evaluation of biosphere features, events, and processes (FEPs) that relate to the license application (LA) process as required by the U.S. Nuclear Regulatory Commission (NRC) regulations at 10 CFR 63.114 (d, e, and f) [DIRS 156605]. The evaluation determines whether specific biosphere-related FEPs should be included or excluded from consideration in the Total System Performance Assessment (TSPA). This analysis documents the technical basis for screening decisions as required at 10 CFR 63.114 (d, e, and f) [DIRS 156605]. For FEPs that are included in the TSPA, this analysis provides a TSPA disposition, which summarizes how the FEP has been included and addressed in the TSPA model, and cites the analysis reports and model reports that provide the technical basis and description of its disposition. For FEPs that are excluded from the TSPA, this analysis report provides a screening argument, which identifies the basis for the screening decision (i.e., low probability, low consequence, or by regulation) and discusses the technical basis that supports that decision. In cases, where a FEP covers multiple technical areas and is shared with other FEP analysis reports, this analysis may provide only a partial technical basis for the screening of the FEP. The full technical basis for these shared FEPs is addressed collectively by all FEP analysis reports that cover technical disciplines sharing a FEP. FEPs must be included in the TSPA unless they can be excluded by low probability, low consequence, or regulation. A FEP can be excluded from the TSPA by low probability per 10 CFR 63.114(d) [DIRS 156605], by showing that it has less than one chance in 10,000 of occurring over 10,000 years (or an approximately equivalent annualized probability of 10{sup -8}). A FEP can be excluded from the TSPA by low consequence per 10 CFR 63.114 (e or f) [DIRS 156605], by showing that omitting the FEP would not significantly change the magnitude and

Evaluation of Features, Events, and Processes (FEP) for the Biosphere Model

Energy Technology Data Exchange (ETDEWEB)

J. J. Tappen

2003-02-16

The purpose of this revision of ''Evaluation of the Applicability of Biosphere-Related Features, Events, and Processes (FEPs)'' (BSC 2001) is to document the screening analysis of biosphere-related primary FEPs, as identified in ''The Development of Information Catalogued in REV00 of the YMP FEP Database'' (Freeze et al. 2001), in accordance with the requirements of the final U.S. Nuclear Regulatory Commission (NRC) regulations at 10 CFR Part 63. This database is referred to as the Yucca Mountain Project (YMP) FEP Database throughout this document. Those biosphere-related primary FEPs that are screened as applicable will be used to develop the conceptual model portion of the biosphere model, which will in turn be used to develop the mathematical model portion of the biosphere model. As part of this revision, any reference to the screening guidance or criteria provided either by Dyer (1999) or by the proposed NRC regulations at 64 FR 8640 has been removed. The title of this revision has been changed to more accurately reflect the purpose of the analyses. In addition, this revision will address Item Numbers 19, 20, 21, 25, and 26 from Attachment 2 of ''U.S. Nuclear Regulatory Commission/U.S. Department of Energy Technical Exchange and Management Meeting on Total System Performance Assessment and Integration (August 6 through 10, 2001)'' (Reamer 2001). This Scientific Analysis Report (SAR) does not support the current revision to the YMP FEP Database (Freeze et al. 2001). Subsequent to the release of the YMP FEP Database (Freeze et al. 2001), a series of reviews was conducted on both the FEP processes used to support Total System Performance Assessment for Site Recommendation and to develop the YMP FEP Database. In response to observations and comments from these reviews, particularly the NRC/DOE TSPA Technical Exchange in August 2001 (Reamer 2001), several Key Technical Issue (KTI) Agreements were developed

Final report - Reduction of mercury in saturated subsurface sediments and its potential to mobilize mercury in its elemental form

Energy Technology Data Exchange (ETDEWEB)

Bakray, Tamar [Rutgers University

2013-06-13

The goal of our project was to investigate Hg(II) reduction in the deep subsurface. We focused on microbial and abiotic pathways of reduction and explored how it affected the toxicity and mobility of Hg in this unique environment. The project’s tasks included: 1. Examining the role of mer activities in the reduction of Hg(II) in denitrifying enrichment cultures; 2. Investigating the biotic/abiotic reduction of Hg(II) under iron reducing conditions; 3. Examining Hg(II) redox transformations under anaerobic conditions in subsurface sediments from DOE sites.

Methodology for the biosphere evaluation during the RRAA management. Application for the Mediterranean system

International Nuclear Information System (INIS)

Pinedo, P.; Simon, I.; Aguero, A.

1998-01-01

For several years CIEMAT has been developing for ENRESA knowledge and tools to support the modelling of the migration and accumulation of radionuclides within the biosphere once those radionuclides are released or reach one or more parts of the biosphere (atmosphere, water impacts arising from the resulting distribution of radionuclides in the biosphere. In 1996, a Methodology to analyse the biosphere in the context of high level waste repositories was proposed to ENRESA, where the issues mentioned above were considered and treated. The level of development of the different aspects proposed within the Methodology was quite heterogeneous and, while aspects of radionuclide transport modelling were already well developed in theoretical and practical terms, other aspects like the procedure for conceptual model development using the RES matrix and the description of biosphere systems representatives of the long term needed further developments. These own methodological developments have been developed in parallel with similar international developments within which there were and are an active participation, the BIOMOVS II international Project, finalized in 1996 and where it was developed the so called Reference Biosphere Methodology and, the International Atomic Energy Agency (IAEA) Programme on Biosphere Modelling and Assessment (BIOMASS), that is developed at present in collaboration with several national organizations, ENRESA and CIEMAT among them. The work described here takes account of these international developments. The overall purpose of this work is to apply the Methodology, to the last performance assessment (PA) exercise made by ENRESA, using form it the general and particular information about the assessment context, the source term, and the geo-biosphere interface data. (Author) 6 refs

Carbon mineralization in surface and subsurface soils in a subtropical mixed forest in central China

Science.gov (United States)

Liu, F.; Tian, Q.

2014-12-01

About a half of soil carbon is stored in subsurface soil horizons, their dynamics have the potential to significantly affect carbon balancing in terrestrial ecosystems. However, the main factors regulating subsurface soil carbon mineralization are poorly understood. As affected by mountain humid monsoon, the subtropical mountains in central China has an annual precipitation of about 2000 mm, which causes strong leaching of ions and nutrition. The objectives of this study were to monitor subsurface soil carbon mineralization and to determine if it is affected by nutrient limitation. We collected soil samples (up to 1 m deep) at three locations in a small watershed with three soil layers (0-10 cm, 10-30 cm, below 30 cm). For the three layers, soil organic carbon (SOC) ranged from 35.8 to 94.4 mg g-1, total nitrogen ranged from 3.51 to 8.03 mg g-1, microbial biomass carbon (MBC) ranged from 170.6 to 718.4 μg g-1 soil. We measured carbon mineralization with the addition of N (100 μg N/g soil), P (50 μg P/g soil), and liable carbon (glucose labeled by 5 atom% 13C, at five levels: control, 10% MBC, 50% MBC, 100% MBC, 200% MBC). The addition of N and P had negligible effects on CO2 production in surface soil layers; in the deepest soil layer, the addition of N and P decreased CO2 production from 4.32 to 3.20 μg C g-1 soil carbon h-1. Glucose addition stimulated both surface and subsurface microbial mineralization of SOC, causing priming effects. With the increase of glucose addition rate from 10% to 200% MBC, the primed mineralization rate increased from 0.19 to 3.20 μg C g-1 soil carbon h-1 (fifth day of glucose addition). The magnitude of priming effect increased from 28% to 120% as soil layers go deep compare to the basal CO2 production (fifth day of 200% MBC glucose addition, basal CO2 production rate for the surface and the deepest soil was 11.17 and 2.88 μg C g-1 soil carbon h-1). These results suggested that the mineralization of subsurface carbon is more

Variability of soil potential for biodegradation of petroleum hydrocarbons in a heterogeneous subsurface

DEFF Research Database (Denmark)

Kristensen, Andreas Houlberg; Poulsen, Tjalfe; Mortensen, Lars

2010-01-01

for biodegradation was highly variable, which from autoregressive state-space modeling was partly explained by changes in soil air-filled porosity and gravimetric water content. The results suggest considering biological heterogeneity when evaluating the fate of contaminants in the subsurface.......Quantifying the spatial variability of factors affecting natural attenuation of hydrocarbons in the unsaturated zone is important to (i) performing a reliable risk assessment and (ii) evaluating the possibility for bioremediation of petroleum-polluted sites. Most studies to date have focused...... on the shallow unsaturated zone. Based on a data set comprising analysis of about 100 soil samples taken in a 16-m-deep unsaturated zone polluted with volatile petroleum compounds, we statistically and geostatistically analyzed values of essential soil properties. The subsurface of the site was highly layered...

Building capital through bioregional planning and biosphere reserves

Directory of Open Access Journals (Sweden)

David Brunckhorst

2001-02-01

Full Text Available ABSTRACT: The need to implement innovative approaches to sustainability is now more critical than ever. This discussion draws on parts of the puzzle that must be assembled to achieve integrated, cross-tenure and jurisdictional management of whole regions and their peoples for a sustainable future. A regional, landscape ecology approach helps us to move on from theory and historical lessons to boldly design and adaptively develop novel on-ground models. To take an entirely different approach from conventional thinking, I draw from Common Property Resource (CPR theory and experience, together with practical experience from the Bookmark Biosphere project. The characteristics of successful enduring Common Property regimes are identified and discussed in light of critical needs to maintain and restore social and ecological capital. I then highlight the concepts and logistical objectives behind the 30-year-old UNESCO Biosphere Reserve Program, which appears to have great potential as an operational framework within which these changes can be made. The Biosphere Reserve Program is maturing through integration of cultural needs and aspirations for quality of life, while conserving natural values and ecosystem processes. In particular, progress is being made through bioregional planning and management incorporating a variety of IUCN protected area types with novel, sustainable, resource-use diversification. The novel arrangements, experience and lessons from one developing model, Bookmark Biosphere Reserve in South Australia, are described as an example. I wish to encourage more models like the Bookmark experiment to evolve through even greater creativity and engagement with public and private partners. On-ground models that demonstrate innovative alternative land use management in the rangelands or integration across the coastal-marine interface are especially needed.

Hadal biosphere: insight into the microbial ecosystem in the deepest ocean on Earth.

Science.gov (United States)

Nunoura, Takuro; Takaki, Yoshihiro; Hirai, Miho; Shimamura, Shigeru; Makabe, Akiko; Koide, Osamu; Kikuchi, Tohru; Miyazaki, Junichi; Koba, Keisuke; Yoshida, Naohiro; Sunamura, Michinari; Takai, Ken

2015-03-17

Hadal oceans at water depths below 6,000 m are the least-explored aquatic biosphere. The Challenger Deep, located in the western equatorial Pacific, with a water depth of ∼11 km, is the deepest ocean on Earth. Microbial communities associated with waters from the sea surface to the trench bottom (0∼10,257 m) in the Challenger Deep were analyzed, and unprecedented trench microbial communities were identified in the hadal waters (6,000∼10,257 m) that were distinct from the abyssal microbial communities. The potentially chemolithotrophic populations were less abundant in the hadal water than those in the upper abyssal waters. The emerging members of chemolithotrophic nitrifiers in the hadal water that likely adapt to the higher flux of electron donors were also different from those in the abyssal waters that adapt to the lower flux of electron donors. Species-level niche separation in most of the dominant taxa was also found between the hadal and abyssal microbial communities. Considering the geomorphology and the isolated hydrotopographical nature of the Mariana Trench, we hypothesized that the distinct hadal microbial ecosystem was driven by the endogenous recycling of organic matter in the hadal waters associated with the trench geomorphology.

The status of world biosphere modelling for waste disposal assessments following BIOMOVS II

International Nuclear Information System (INIS)

Klos, R.; Reid, J.A.K.; Santucci, P.; Bergstrom, U.

1996-01-01

Biosphere modelling for radioactive waste disposal assessments faces unique problems. Models for such applications tend to be quite distinct from other similar environmental assessment tools. Over the past few years, two of the Working Groups in the second international biosphere model validation study (BIOMOVS II) have been considering the special requirements for such models. The BIOMOVS II Reference Biospheres Working Group has concentrated on the elaboration of the methodology for the definition of models for such assessments. lie Complementary Studies Working Group has dealt with how the Features, Events and Processes (FEPS) included in the participating models are represented, in the context of the representation of a temperate inland biosphere. The aim of Complementary Studies was to move forward from the first phase of BIOMOVS, with the analysis going further and deeper into principles on which the participating models are based. Ten of the leading models from around the world have participated in the Complementary Studies model intercomparison exercise. This paper presents some key findings using the international biosphere FEP-list produced by the Reference Biospheres Working Group as a framework for discussing the current state-of-the-art. Common features of the models as well as reasons for the model differences are discussed. Areas where the international community could benefit from a harmonisation of approaches are also identified, setting out possible future requirements and developments. In the Complementary Studies intercomparison, the hypothetical release of radionuclides to an inland valley biosphere was considered. The radionuclides considered in the study were selected because of their relevance for underground repositories for long-lived radioactive wastes and because their individual properties made them suitable probes for many of the important Features, Events and Processes (FEPS) in long timescale biosphere modelling. The data

Homoacetogenesis in Deep-Sea Chloroflexi, as Inferred by Single-Cell Genomics, Provides a Link to Reductive Dehalogenation in Terrestrial Dehalococcoidetes

Directory of Open Access Journals (Sweden)

Holly L. Sewell

2017-12-01

Full Text Available The deep marine subsurface is one of the largest unexplored biospheres on Earth and is widely inhabited by members of the phylum Chloroflexi. In this report, we investigated genomes of single cells obtained from deep-sea sediments of the Peruvian Margin, which are enriched in such Chloroflexi. 16S rRNA gene sequence analysis placed two of these single-cell-derived genomes (DscP3 and Dsc4 in a clade of subphylum I Chloroflexi which were previously recovered from deep-sea sediment in the Okinawa Trough and a third (DscP2-2 as a member of the previously reported DscP2 population from Peruvian Margin site 1230. The presence of genes encoding enzymes of a complete Wood-Ljungdahl pathway, glycolysis/gluconeogenesis, a Rhodobacter nitrogen fixation (Rnf complex, glyosyltransferases, and formate dehydrogenases in the single-cell genomes of DscP3 and Dsc4 and the presence of an NADH-dependent reduced ferredoxin:NADP oxidoreductase (Nfn and Rnf in the genome of DscP2-2 imply a homoacetogenic lifestyle of these abundant marine Chloroflexi. We also report here the first complete pathway for anaerobic benzoate oxidation to acetyl coenzyme A (CoA in the phylum Chloroflexi (DscP3 and Dsc4, including a class I benzoyl-CoA reductase. Of remarkable evolutionary significance, we discovered a gene encoding a formate dehydrogenase (FdnI with reciprocal closest identity to the formate dehydrogenase-like protein (complex iron-sulfur molybdoenzyme [CISM], DET0187 of terrestrial Dehalococcoides/Dehalogenimonas spp. This formate dehydrogenase-like protein has been shown to lack formate dehydrogenase activity in Dehalococcoides/Dehalogenimonas spp. and is instead hypothesized to couple HupL hydrogenase to a reductive dehalogenase in the catabolic reductive dehalogenation pathway. This finding of a close functional homologue provides an important missing link for understanding the origin and the metabolic core of terrestrial Dehalococcoides/Dehalogenimonas spp. and of

Review of Project SAFE: Comments on biosphere conceptual model description and risk assessment methodology

International Nuclear Information System (INIS)

Klos, Richard; Wilmot, Roger

2002-09-01

The Swedish Nuclear Fuel and Waste Management Company's (SKB's) most recent assessment of the safety of the Forsmark repository for low-level and intermediate-level waste (Project SAFE) is currently undergoing review by the Swedish regulators. As part of its review, the Swedish Radiation Protection Institute (SSI) identified that two components of SAFE require more detailed review: (i) the conceptual model description of the biosphere system, and (ii) SKB's risk assessment methodology. We have reviewed the biosphere system interaction matrix and how this has been used in the identification, justification and description of biosphere models for radiological assessment purposes. The risk assessment methodology has been reviewed considering in particular issues associated with scenario selection, assessment timescale, and the probability and risk associated with the well scenario. There is an extensive range of supporting information on which biosphere modelling in Project SAFE is based. However, the link between this material and the biosphere models themselves is not clearly set out. This leads to some contradictions and mis-matches between description and implementation. One example concerns the representation of the geosphere-biosphere interface. The supporting description of lakes indicates that interaction between groundwaters entering the biosphere through lake bed sediments could lead to accumulations of radionuclides in sediments. These sediments may become agricultural areas at some time in the future. In the numerical modelling of the biosphere carried out in Project SAFE, the direct accumulation of contaminants in bed sediments is not represented. Application of a more rigorous procedure to ensure numerical models are fit for purpose is recommended, paying more attention to issues associated with the geosphere-biosphere interface. A more structured approach to risk assessment would be beneficial, with a better explanation of the difference between

Terrain and subsurface influences on runoff generation in a steep, deep, highly weathered system

Science.gov (United States)

Mallard, J. M.; McGlynn, B. L.; Richter, D. D., Jr.

2017-12-01

Our understanding of runoff generation in regions characterized by deep, highly weathered soils is incomplete, despite the prevalence occupation of these landscapes worldwide. To address this, we instrumented a first-order watershed in the Piedmont of South Carolina, USA, a region that extends east of the Appalachians from Maryland to Alabama, and home to some of the most rapid population growth in the country. Although regionally the relief is modest, the landscape is often highly dissected and local slopes can be steep and highly varied. The typical soils of the region are kaolinite dominated ultisols, with hydrologic properties controlled by argillic Bt horizons, often with >50% clay-size fraction. The humid subtropical climate creates relatively consistent precipitation intra-annually and seasonally variable energy availability. Consequently, the mixed deciduous and coniferous tree cover creates a strong evapotranspiration-mediated hydrologic dynamic. While moist soils and extended stream networks are typical from late fall through spring, relatively dry soils and contracting stream networks emerge in the summer and early fall. Here, we seek to elucidate the relative influence of the vertical soil and spatial terrain structure of this region on watershed hillslope hydrology and subsequent runoff generation. We installed a network of nested, shallow groundwater wells and soil water content probes within an ephemeral to first-order watershed to continuously measure soil and groundwater dynamics across soil horizons and landscape position. We also recorded local precipitation and discharge from this watershed. Most landscape positions exhibited minimal water table response to precipitation throughout dry summer periods, with infrequently observed responses rarely coincident with streamflow generation. In contrast, during the wetter late fall through early spring period, streamflow was driven by the interaction between transient perched water tables and

Methodology for biosphere analysis in high level waste disposal. Application to the Mediterranean system

International Nuclear Information System (INIS)

Pinedo, P.; Simon, I.; Aguero, A.; Cancio, D.

2000-01-01

For several years CIEMAT has been developing for ENRESA a conceptual approach and tools to support the modelling of the migration and accumulation of radionuclides within the biosphere once those radionuclides are released or reach one or more parts of the biosphere (atmosphere, water bodies or soils). The model development also includes evaluation of radiological impacts arising from the resulting distribution of radionuclides in the biosphere. At the time when the methodology was proposed, the level of development of the different aspects proposed within it was quite heterogeneous and, while aspects of radionuclide transport modelling were already well developed in theoretical and practical terms, other aspects, like the procedure for conceptual model development and the description of biosphere systems representatives of the long term needed further developments. The developments have been performed in parallel to international projects, within which there were and are an active participation, mainly, the BIOphere Models Validation Study (BIOMOVS II) international Project, within which it was developed the so called Reference Biosphere Methodology and, the International Atomic Energy Agency (IAEA) Programme on BIOsphere Modelling and ASSessment methods (BIOMASS), that is under development at present. The methodology been made takes account of these international developments. The purpose of the work summarised herein is the application of the methodology to the 1997 performance assessment (PA) exercise made by ENRESA, using from it the general and particular information about the assessment context, the source term, and the geo-biosphere interface data. (author)

Implementation of the Biosphere Compatibility Principle in Urban Planning: How to Train Next-Generation Specialists

Science.gov (United States)

Ivanova, Zinaida Ilyinichna; Yudenkova, Olga Valeryevna; Ishkov, Aleksandr Dmitrievich; Shnyrenkov, Evgeny Anatolyevich

2015-01-01

The co-authors address the relevant issues concerning the need to implement the principle of the biosphere compatibility as the core prerequisite for the symbiotic co-existence of man and nature. Caring treatment of the biosphere, termination of its excessive exploitation, analysis of the ratio between the biospheric potential of specific areas…

Final report - Microbial pathways for the reduction of mercury in saturated subsurface sediments

Energy Technology Data Exchange (ETDEWEB)

Tamar barkay; Lily Young; Gerben Zylstra

2009-08-25

Mercury is a component of mixed wastes that have contaminated vast areas of the deep subsurface as a result of nuclear weapon and energy production. While this mercury is mostly bound to soil constituents episodes of groundwater contamination are known in some cases resulting in potable water super saturated with Hg(0). Microbial processes that reduce Hg(II) to the elemental form Hg(0) in the saturated subsurface sediments may contribute to this problem. When we started the project, only one microbial pathway for the reduction of Hg(II), the one mediated by the mer operon in mercury resistant bacteria was known. As we had previously demonstrated that the mer mediated process occurred in highly contaminated environments (Schaefer et al., 2004), and mercury concentrations in the subsurface were reported to be low (Krabbenhoft and Babiarz, 1992), we hypothesized that other microbial processes might be active in reducing Hg(II) to Hg(0) in saturated subsurface environments. The specific goals of our projects were: (1) Investigating the potential for Hg(II) reduction under varying electron accepting conditions in subsurface sediments and relating these potential to mer gene distribution; and (2) Examining the physiological and biochemical characteristics of the interactions of anaerobic bacteria with mercury. The results are briefly summarized with references to published papers and manuscripts in preparation where details about our research can be found. Additional information may be found in copies of our published manuscripts and conference proceedings, and our yearly reports that were submitted through the RIMS system.

Radioecological modelling of the biosphere as illustrated by the example of the model area Oberbauenstock

International Nuclear Information System (INIS)

Boehringer, J.; Fritschi, M.; Schwanner, I.; Resele, G.

1986-06-01

The biosphere model is the final link in the chain of radionuclide transport models used for radiation dose calculations for nuclear waste repositories. The dispersion of radionuclides from a low and intermediate level waste repository in the biosphere and their uptake by man through food pathways is investigated with a compartment model. The relevant biosphere parameters were based on the model site at Oberbauenstock and compiled as a model data set for further use in the biosphere modelling. Nuclide concentrations in the biosphere compartments and foodstuffs as well as annual individual radiation doses are calculated with the computer program BIOSPH. The present report contains a description of the model area and its subdivision into 4 compartments, a compilation of the relevant parameters and the simplifying assumptions that have been made, discussion of mathematical modelling of nuclide transport in the biosphere and of the calculation of the individual radiation doses, a technical description of the computer program BIOSPH and a detailed presentation of the results from the model calculations. (author)

The World Campaign for the Biosphere.

Science.gov (United States)

Barman, Charles R.

1984-01-01

Lists and discusses goals of The World Campaign for the Biosphere and strategies designed to achieve these goals. Also lists eight suggestions for science teachers to help incorporate the goals into school curricula and programs. These include organizing assemblies which present information about environmental problems and presenting environmental…

Complex Systems Science for Subsurface Fate and Transport Report from the August 2009 Workshop

Energy Technology Data Exchange (ETDEWEB)

None

2010-03-01

The subsurface environment, which encompasses the vadose and saturated zones, is a heterogeneous, geologically complex domain. Believed to contain a large percentage of Earth's biomass in the form of microorganisms, the subsurface is a dynamic zone where important biogeochemical cycles work to sustain life. Actively linked to the atmosphere and biosphere through the hydrologic and carbon cycles, the subsurface serves as a storage location for much of Earth's fresh water. Coupled hydrological, microbiological, and geochemical processes occurring within the subsurface environment cause the local and regional natural chemical fluxes that govern water quality. These processes play a vital role in the formation of soil, economically important fossil fuels, mineral deposits, and other natural resources. Cleaning up Department of Energy (DOE) lands impacted by legacy wastes and using the subsurface for carbon sequestration or nuclear waste isolation require a firm understanding of these processes and the documented means to characterize the vertical and spatial distribution of subsurface properties directing water, nutrient, and contaminant flows. This information, along with credible, predictive models that integrate hydrological, microbiological, and geochemical knowledge over a range of scales, is needed to forecast the sustainability of subsurface water systems and to devise ways to manage and manipulate dynamic in situ processes for beneficial outcomes. Predictive models provide the context for knowledge integration. They are the primary tools for forecasting the evolving geochemistry or microbial ecology of groundwater under various scenarios and for assessing and optimizing the potential effectiveness of proposed approaches to carbon sequestration, waste isolation, or environmental remediation. An iterative approach of modeling and experimentation can reveal powerful insights into the behavior of subsurface systems. State-of-science understanding codified

Complex Systems Science for Subsurface Fate and Transport Report from the August 2009 Workshop

International Nuclear Information System (INIS)

2010-01-01

The subsurface environment, which encompasses the vadose and saturated zones, is a heterogeneous, geologically complex domain. Believed to contain a large percentage of Earth's biomass in the form of microorganisms, the subsurface is a dynamic zone where important biogeochemical cycles work to sustain life. Actively linked to the atmosphere and biosphere through the hydrologic and carbon cycles, the subsurface serves as a storage location for much of Earth's fresh water. Coupled hydrological, microbiological, and geochemical processes occurring within the subsurface environment cause the local and regional natural chemical fluxes that govern water quality. These processes play a vital role in the formation of soil, economically important fossil fuels, mineral deposits, and other natural resources. Cleaning up Department of Energy (DOE) lands impacted by legacy wastes and using the subsurface for carbon sequestration or nuclear waste isolation require a firm understanding of these processes and the documented means to characterize the vertical and spatial distribution of subsurface properties directing water, nutrient, and contaminant flows. This information, along with credible, predictive models that integrate hydrological, microbiological, and geochemical knowledge over a range of scales, is needed to forecast the sustainability of subsurface water systems and to devise ways to manage and manipulate dynamic in situ processes for beneficial outcomes. Predictive models provide the context for knowledge integration. They are the primary tools for forecasting the evolving geochemistry or microbial ecology of groundwater under various scenarios and for assessing and optimizing the potential effectiveness of proposed approaches to carbon sequestration, waste isolation, or environmental remediation. An iterative approach of modeling and experimentation can reveal powerful insights into the behavior of subsurface systems. State-of-science understanding codified in models

Denitrifying bacteria from the terrestrial subsurface exposed to mixed waste contamination

International Nuclear Information System (INIS)

Green, Stefan; Prakash, Om; Gihring, Thomas; Akob, Denise M.; Jasrotia, Puja; Jardine, Philip M.; Watson, David B.; Brown, Steven David; Palumbo, Anthony Vito; Kostka, Joel

2010-01-01

In terrestrial subsurface environments where nitrate is a critical groundwater contaminant, few cultivated representatives are available with which to verify the metabolism of organisms that catalyze denitrification. In this study, five species of denitrifying bacteria from three phyla were isolated from subsurface sediments exposed to metal radionuclide and nitrate contamination as part of the U.S. Department of Energy's Oak Ridge Integrated Field Research Challenge (OR-IFRC). Isolates belonged to the genera Afipia and Hyphomicrobium (Alphaproteobacteria), Rhodanobacter (Gammaproteobacteria), Intrasporangium (Actinobacteria) and Bacillus (Firmicutes). Isolates from the phylum Proteobacteria were confirmed as complete denitrifiers, whereas the Gram-positive isolates reduced nitrate to nitrous oxide. Ribosomal RNA gene analyses reveal that bacteria from the genus Rhodanobacter comprise a diverse population of circumneutral to moderately acidophilic denitrifiers at the ORIFRC site, with a high relative abundance in areas of the acidic source zone. Rhodanobacter species do not contain a periplasmic nitrite reductase and have not been previously detected in functional gene surveys of denitrifying bacteria at the OR-IFRC site. Sequences of nitrite and nitrous oxide reductase genes were recovered from the isolates and from the terrestrial subsurface by designing primer sets mined from genomic and metagenomic data and from draft genomes of two of the isolates. We demonstrate that a combination of cultivation, genomic and metagenomic data are essential to the in situ characterization of denitrifiers and that current PCR-based approaches are not suitable for deep coverage of denitrifying microorganisms. Our results indicate that the diversity of denitrifiers is significantly underestimated in the terrestrial subsurface.

Climate change and the biosphere option: moving to a sustainable future

International Nuclear Information System (INIS)

Layzell, D.B.; Mitchell, H.M.

1999-01-01

Human activities resulting in greenhouse gas (GHG) emissions have been implicated as the primary factor forcing climate change. This evidence led to a landmark international agreement in Kyoto, (1997) committing the developed countries of the world to reductions in GHG emissions. In Canada, fossil fuel use over the past few centuries has released about 5200 Mt C into the atmosphere. An equivalent amount has probably been added as a result of deforestation and agricultural practice in this country. If we can manage our biosphere better and return even a fraction of the lost biosphere C, we can make a significant contribution to reducing Canada's current annual GHG emission. In the process, plants ( including trees) will trap the sun's energy and build an energy-rich biomass that we can learn to utilize as an energy, chemical and material resource for the future. In doing so, we will relieve the escalating demand for fossil fuels. The BIOCAP Network will be a multidisciplinary group of university, government and industry researchers dedicated to exploring the scientific, technological and policy implications of this 'biosphere option'. Canada's 'biosphere option' for GHG management is both a national opportunity and a global responsibility

Subsurface Ventilation System Description Document

Energy Technology Data Exchange (ETDEWEB)

Eric Loros

2001-07-25

The Subsurface Ventilation System supports the construction and operation of the subsurface repository by providing air for personnel and equipment and temperature control for the underground areas. Although the system is located underground, some equipment and features may be housed or located above ground. The system ventilates the underground by providing ambient air from the surface throughout the subsurface development and emplacement areas. The system provides fresh air for a safe work environment and supports potential retrieval operations by ventilating and cooling emplacement drifts. The system maintains compliance within the limits established for approved air quality standards. The system maintains separate ventilation between the development and waste emplacement areas. The system shall remove a portion of the heat generated by the waste packages during preclosure to support thermal goals. The system provides temperature control by reducing drift temperature to support potential retrieval operations. The ventilation system has the capability to ventilate selected drifts during emplacement and retrieval operations. The Subsurface Facility System is the main interface with the Subsurface Ventilation System. The location of the ducting, seals, filters, fans, emplacement doors, regulators, and electronic controls are within the envelope created by the Ground Control System in the Subsurface Facility System. The Subsurface Ventilation System also interfaces with the Subsurface Electrical System for power, the Monitored Geologic Repository Operations Monitoring and Control System to ensure proper and safe operation, the Safeguards and Security System for access to the emplacement drifts, the Subsurface Fire Protection System for fire safety, the Emplacement Drift System for repository performance, and the Backfill Emplacement and Subsurface Excavation Systems to support ventilation needs.

Subsurface Ventilation System Description Document

Energy Technology Data Exchange (ETDEWEB)

NONE

2000-10-12

The Subsurface Ventilation System supports the construction and operation of the subsurface repository by providing air for personnel and equipment and temperature control for the underground areas. Although the system is located underground, some equipment and features may be housed or located above ground. The system ventilates the underground by providing ambient air from the surface throughout the subsurface development and emplacement areas. The system provides fresh air for a safe work environment and supports potential retrieval operations by ventilating and cooling emplacement drifts. The system maintains compliance within the limits established for approved air quality standards. The system maintains separate ventilation between the development and waste emplacement areas. The system shall remove a portion of the heat generated by the waste packages during preclosure to support thermal goals. The system provides temperature control by reducing drift temperature to support potential retrieval operations. The ventilation system has the capability to ventilate selected drifts during emplacement and retrieval operations. The Subsurface Facility System is the main interface with the Subsurface Ventilation System. The location of the ducting, seals, filters, fans, emplacement doors, regulators, and electronic controls are within the envelope created by the Ground Control System in the Subsurface Facility System. The Subsurface Ventilation System also interfaces with the Subsurface Electrical System for power, the Monitored Geologic Repository Operations Monitoring and Control System to ensure proper and safe operation, the Safeguards and Security System for access to the emplacement drifts, the Subsurface Fire Protection System for fire safety, the Emplacement Drift System for repository performance, and the Backfill Emplacement and Subsurface Excavation Systems to support ventilation needs.

Subsurface Facility System Description Document