WorldWideScience

Sample records for deep sea radioisotope-fueled

  1. Deep-sea fungi

    Digital Repository Service at National Institute of Oceanography (India)

    Raghukumar, C; Damare, S.R.

    significant in terms of carbon sequestration (5, 8). In light of this, the diversity, abundance, and role of fungi in deep-sea sediments may form an important link in the global C biogeochemistry. This review focuses on issues related to collection...

  2. Deep sea radionuclides

    International Nuclear Information System (INIS)

    Kanisch, G.; Vobach, M.

    1993-01-01

    Every year since 1979, either in sping or in summer, the fishing research vessel 'Walther Herwig' goes to the North Atlantic disposal areas of solid radioactive wastes, and, for comparative purposes, to other areas, in order to collect water samples, plankton and nekton, and, from the deep sea bed, sediment samples and benthos organisms. In addition to data on the radionuclide contents of various media, information about the plankton, nekton and benthos organisms living in those areas and about their biomasses could be gathered. The investigations are aimed at acquiring scientifically founded knowledge of the uptake of radioactive substances by microorganisms, and their migration from the sea bottom to the areas used by man. (orig.) [de

  3. Deep sea biophysics

    International Nuclear Information System (INIS)

    Yayanos, A.A.

    1982-01-01

    A collection of deep-sea bacterial cultures was completed. Procedures were instituted to shelter the culture collection from accidential warming. A substantial data base on the rates of reproduction of more than 100 strains of bacteria from that collection was obtained from experiments and the analysis of that data was begun. The data on the rates of reproduction were obtained under conditions of temperature and pressure found in the deep sea. The experiments were facilitated by inexpensively fabricated pressure vessels, by the streamlining of the methods for the study of kinetics at high pressures, and by computer-assisted methods. A polybarothermostat was used to study the growth of bacteria along temperature gradients at eight distinct pressures. This device should allow for the study of microbial processes in the temperature field simulating the environment around buried HLW. It is small enough to allow placement in a radiation field in future studies. A flow fluorocytometer was fabricated. This device will be used to determine the DNA content per cell in bacteria grown in laboratory culture and in microorganisms in samples from the ocean. The technique will be tested for its rapidity in determining the concentration of cells (standing stock of microorganisms) in samples from the ocean

  4. Ploughing the deep sea floor.

    Science.gov (United States)

    Puig, Pere; Canals, Miquel; Company, Joan B; Martín, Jacobo; Amblas, David; Lastras, Galderic; Palanques, Albert

    2012-09-13

    Bottom trawling is a non-selective commercial fishing technique whereby heavy nets and gear are pulled along the sea floor. The direct impact of this technique on fish populations and benthic communities has received much attention, but trawling can also modify the physical properties of seafloor sediments, water–sediment chemical exchanges and sediment fluxes. Most of the studies addressing the physical disturbances of trawl gear on the seabed have been undertaken in coastal and shelf environments, however, where the capacity of trawling to modify the seafloor morphology coexists with high-energy natural processes driving sediment erosion, transport and deposition. Here we show that on upper continental slopes, the reworking of the deep sea floor by trawling gradually modifies the shape of the submarine landscape over large spatial scales. We found that trawling-induced sediment displacement and removal from fishing grounds causes the morphology of the deep sea floor to become smoother over time, reducing its original complexity as shown by high-resolution seafloor relief maps. Our results suggest that in recent decades, following the industrialization of fishing fleets, bottom trawling has become an important driver of deep seascape evolution. Given the global dimension of this type of fishery, we anticipate that the morphology of the upper continental slope in many parts of the world’s oceans could be altered by intensive bottom trawling, producing comparable effects on the deep sea floor to those generated by agricultural ploughing on land.

  5. A Deep-Sea Simulation.

    Science.gov (United States)

    Montes, Georgia E.

    1997-01-01

    Describes an activity that simulates exploration techniques used in deep-sea explorations and teaches students how this technology can be used to take a closer look inside volcanoes, inspect hazardous waste sites such as nuclear reactors, and explore other environments dangerous to humans. (DDR)

  6. Vision in the deep sea.

    Science.gov (United States)

    Warrant, Eric J; Locket, N Adam

    2004-08-01

    The deep sea is the largest habitat on earth. Its three great faunal environments--the twilight mesopelagic zone, the dark bathypelagic zone and the vast flat expanses of the benthic habitat--are home to a rich fauna of vertebrates and invertebrates. In the mesopelagic zone (150-1000 m), the down-welling daylight creates an extended scene that becomes increasingly dimmer and bluer with depth. The available daylight also originates increasingly from vertically above, and bioluminescent point-source flashes, well contrasted against the dim background daylight, become increasingly visible. In the bathypelagic zone below 1000 m no daylight remains, and the scene becomes entirely dominated by point-like bioluminescence. This changing nature of visual scenes with depth--from extended source to point source--has had a profound effect on the designs of deep-sea eyes, both optically and neurally, a fact that until recently was not fully appreciated. Recent measurements of the sensitivity and spatial resolution of deep-sea eyes--particularly from the camera eyes of fishes and cephalopods and the compound eyes of crustaceans--reveal that ocular designs are well matched to the nature of the visual scene at any given depth. This match between eye design and visual scene is the subject of this review. The greatest variation in eye design is found in the mesopelagic zone, where dim down-welling daylight and bio-luminescent point sources may be visible simultaneously. Some mesopelagic eyes rely on spatial and temporal summation to increase sensitivity to a dim extended scene, while others sacrifice this sensitivity to localise pinpoints of bright bioluminescence. Yet other eyes have retinal regions separately specialised for each type of light. In the bathypelagic zone, eyes generally get smaller and therefore less sensitive to point sources with increasing depth. In fishes, this insensitivity, combined with surprisingly high spatial resolution, is very well adapted to the

  7. NESTOR Deep Sea Neutrino Telescope

    International Nuclear Information System (INIS)

    Aggouras, G.; Anassontzis, E.G.; Ball, A.E.; Bourlis, G.; Chinowsky, W.; Fahrun, E.; Grammatikakis, G.; Green, C.; Grieder, P.; Katrivanos, P.; Koske, P.; Leisos, A.; Markopoulos, E.; Minkowsky, P.; Nygren, D.; Papageorgiou, K.; Przybylski, G.; Resvanis, L.K.; Siotis, I.; Sopher, J.; Staveris-Polikalas, A.; Tsagli, V.; Tsirigotis, A.; Tzamarias, S.; Zhukov, V.A.

    2006-01-01

    One module of NESTOR, the Mediterranean deep-sea neutrino telescope, was deployed at a depth of 4000m, 14km off the Sapienza Island, off the South West coast of Greece. The deployment site provides excellent environmental characteristics. The deployed NESTOR module is constructed as a hexagonal star like latticed titanium star with 12 Optical Modules and an one-meter diameter titanium sphere which houses the electronics. Power and data were transferred through a 30km electro-optical cable to the shore laboratory. In this report we describe briefly the detector and the detector electronics and discuss the first physics data acquired and give the zenith angular distribution of the reconstructed muons

  8. Temperature impacts on deep-sea biodiversity.

    Science.gov (United States)

    Yasuhara, Moriaki; Danovaro, Roberto

    2016-05-01

    Temperature is considered to be a fundamental factor controlling biodiversity in marine ecosystems, but precisely what role temperature plays in modulating diversity is still not clear. The deep ocean, lacking light and in situ photosynthetic primary production, is an ideal model system to test the effects of temperature changes on biodiversity. Here we synthesize current knowledge on temperature-diversity relationships in the deep sea. Our results from both present and past deep-sea assemblages suggest that, when a wide range of deep-sea bottom-water temperatures is considered, a unimodal relationship exists between temperature and diversity (that may be right skewed). It is possible that temperature is important only when at relatively high and low levels but does not play a major role in the intermediate temperature range. Possible mechanisms explaining the temperature-biodiversity relationship include the physiological-tolerance hypothesis, the metabolic hypothesis, island biogeography theory, or some combination of these. The possible unimodal relationship discussed here may allow us to identify tipping points at which on-going global change and deep-water warming may increase or decrease deep-sea biodiversity. Predicted changes in deep-sea temperatures due to human-induced climate change may have more adverse consequences than expected considering the sensitivity of deep-sea ecosystems to temperature changes. © 2014 Cambridge Philosophical Society.

  9. Deep-Sea Soft Coral Habitat Suitability

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Deep-sea corals, also known as cold water corals, create complex communities that provide habitat for a variety of invertebrate and fish species, such as grouper,...

  10. Deep-Sea Stony Coral Habitat Suitability

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Deep-sea corals, also known as cold water corals, create complex communities that provide habitat for a variety of invertebrate and fish species, such as grouper,...

  11. Methods in mooring deep sea sediment traps

    Digital Repository Service at National Institute of Oceanography (India)

    Venkatesan, R.; Fernando, V.; Rajaraman, V.S.; Janakiraman, G.

    The experience gained during the process of deployment and retrieval of nearly 39 sets of deep sea sediment trap moorings on various ships like FS Sonne, ORV Sagarkanya and DSV Nand Rachit are outlined. The various problems encountered...

  12. Biodiversity loss from deep-sea mining

    OpenAIRE

    C. L. Van Dover; J. A. Ardron; E. Escobar; M. Gianni; K. M. Gjerde; A. Jaeckel; D. O. B. Jones; L. A. Levin; H. Niner; L. Pendleton; C. R. Smith; T. Thiele; P. J. Turner; L. Watling; P. P. E. Weaver

    2017-01-01

    The emerging deep-sea mining industry is seen by some to be an engine for economic development in the maritime sector. The International Seabed Authority (ISA) – the body that regulates mining activities on the seabed beyond national jurisdiction – must also protect the marine environment from harmful effects that arise from mining. The ISA is currently drafting a regulatory framework for deep-sea mining that includes measures for environmental protection. Responsible mining increasingly stri...

  13. Zooplankton at deep Red Sea brine pools

    KAUST Repository

    Kaartvedt, Stein

    2016-03-02

    The deep-sea anoxic brines of the Red Sea comprise unique, complex and extreme habitats. These environments are too harsh for metazoans, while the brine–seawater interface harbors dense microbial populations. We investigated the adjacent pelagic fauna at two brine pools using net tows, video records from a remotely operated vehicle and submerged echosounders. Waters just above the brine pool of Atlantis II Deep (2000 m depth) appeared depleted of macrofauna. In contrast, the fauna appeared to be enriched at the Kebrit Deep brine–seawater interface (1466 m).

  14. Deep-sea Hexactinellida (Porifera) of the Weddell Sea

    Science.gov (United States)

    Janussen, Dorte; Tabachnick, Konstantin R.; Tendal, Ole S.

    2004-07-01

    New Hexactinellida from the deep Weddel Sea are described. This moderately diverse hexactinellid fauna includes 14 species belonging to 12 genera, of which five species and one subgenus are new to science: Periphragella antarctica n. sp., Holascus pseudostellatus n. sp., Caulophacus (Caulophacus) discohexactinus n. sp., C. ( Caulodiscus) brandti n. sp., C. ( Oxydiscus) weddelli n. sp., and C. ( Oxydiscus) n. subgen. So far, 20 hexactinellid species have been reported from the deep Weddell Sea, 15 are known from the northern part and 10 only from here, while 10 came from the southern area, and five of these only from there. However, this apparent high "endemism" of Antarctic hexactinellid sponges is most likely the result of severe undersampling of the deep-sea fauna. We find no reason to believe that a division between an oceanic and a more continental group of species exists. The current poor database indicates that a substantial part of the deep hexactinellid fauna of the Weddell Sea is shared with other deep-sea regions, but it does not indicate a special biogeographic relationship with any other ocean.

  15. In Brief: Deep-sea observatory

    Science.gov (United States)

    Showstack, Randy

    2008-11-01

    The first deep-sea ocean observatory offshore of the continental United States has begun operating in the waters off central California. The remotely operated Monterey Accelerated Research System (MARS) will allow scientists to monitor the deep sea continuously. Among the first devices to be hooked up to the observatory are instruments to monitor earthquakes, videotape deep-sea animals, and study the effects of acidification on seafloor animals. ``Some day we may look back at the first packets of data streaming in from the MARS observatory as the equivalent of those first words spoken by Alexander Graham Bell: `Watson, come here, I need you!','' commented Marcia McNutt, president and CEO of the Monterey Bay Aquarium Research Institute, which coordinated construction of the observatory. For more information, see http://www.mbari.org/news/news_releases/2008/mars-live/mars-live.html.

  16. Stable isotope geochemistry of deep sea cherts

    Energy Technology Data Exchange (ETDEWEB)

    Kolodny, Y; Epstein, S [California Inst. of Tech., Pasadena (USA). Div. of Geological Sciences

    1976-10-01

    Seventy four samples of DSDP (Deep Sea Drilling Project) recovered cherts of Jurassic to Miocene age from varying locations, and 27 samples of on-land exposed cherts were analyzed for the isotopic composition of their oxygen and hydrogen. These studies were accompanied by mineralogical analyses and some isotopic analyses of the coexisting carbonates. delta/sup 18/0 of chert ranges between 27 and 39 parts per thousand relative to SMOW, delta/sup 18/0 of porcellanite - between 30 and 42 parts per thousand. The consistent enrichment of opal-CT in porcellanites in /sup 18/0 with respect to coexisting microcrystalline quartz in chert is probably a reflection of a different temperature (depth) of diagenesis of the two phases. delta/sup 18/0 of deep sea cherts generally decrease with increasing age, indicating an overall cooling of the ocean bottom during the last 150 m.y. A comparison of this trend with that recorded by benthonic foraminifera (Douglas et al., Initial Reports of the Deep Sea Drilling Project; 32:509(1975)) indicates the possibility of delta/sup 18/0 in deep sea cherts not being frozen in until several tens of millions of years after deposition. Cherts of any Age show a spread of delta/sup 18/0 values, increasing diagenesis being reflected in a lowering of delta/sup 18/0. Drusy quartz has the lowest delta/sup 18/0 values. On land exposed cherts are consistently depleted in /sup 18/0 in comparison to their deep sea time equivalent cherts. Water extracted from deep sea cherts ranges between 0.5 and 1.4 wt%. deltaD of this water ranges between -78 and -95 parts per thousand and is not a function of delta/sup 18/0 of the cherts (or the temperature of their formation).

  17. Deep-sea geohazards in the South China Sea

    Science.gov (United States)

    Wu, Shiguo; Wang, Dawei; Völker, David

    2018-02-01

    Various geological processes and features that might inflict hazards identified in the South China Sea by using new technologies and methods. These features include submarine landslides, pockmark fields, shallow free gas, gas hydrates, mud diapirs and earthquake tsunami, which are widely distributed in the continental slope and reefal islands of the South China Sea. Although the study and assessment of geohazards in the South China Sea came into operation only recently, advances in various aspects are evolving at full speed to comply with National Marine Strategy and `the Belt and Road' Policy. The characteristics of geohazards in deep-water seafloor of the South China Sea are summarized based on new scientific advances. This progress is aimed to aid ongoing deep-water drilling activities and decrease geological risks in ocean development.

  18. Deep Ocean Contribution to Sea Level Rise

    Science.gov (United States)

    Chang, L.; Sun, W.; Tang, H.; Wang, Q.

    2017-12-01

    The ocean temperature and salinity change in the upper 2000m can be detected by Argo floats, so we can know the steric height change of the ocean. But the ocean layers above 2000m represent only 50% of the total ocean volume. Although the temperature and salinity change are small compared to the upper ocean, the deep ocean contribution to sea level might be significant because of its large volume. There has been some research on the deep ocean rely on the very sparse situ observation and are limited to decadal and longer-term rates of change. The available observational data in the deep ocean are too spares to determine the temporal variability, and the long-term changes may have a bias. We will use the Argo date and combine the situ data and topographic data to estimate the temperature and salinity of the sea water below 2000m, so we can obtain a monthly data. We will analyze the seasonal and annual change of the steric height change due to the deep ocean between 2005 and 2016. And we will evaluate the result combination the present-day satellite and in situ observing systems. The deep ocean contribution can be inferred indirectly as the difference between the altimetry minus GRACE and Argo-based steric sea level.

  19. Assessing Deep Sea Communities Through Seabed Imagery

    Science.gov (United States)

    Matkin, A. G.; Cross, K.; Milititsky, M.

    2016-02-01

    The deep sea still remains virtually unexplored. Human activity, such as oil and gas exploration and deep sea mining, is expanding further into the deep sea, increasing the need to survey and map extensive areas of this habitat in order to assess ecosystem health and value. The technology needed to explore this remote environment has been advancing. Seabed imagery can cover extensive areas of the seafloor and investigate areas where sampling with traditional coring methodologies is just not possible (e.g. cold water coral reefs). Remotely operated vehicles (ROVs) are an expensive option, so drop or towed camera systems can provide a more viable and affordable alternative, while still allowing for real-time control. Assessment of seabed imagery in terms of presence, abundance and density of particular species can be conducted by bringing together a variety of analytical tools for a holistic approach. Sixteen deep sea transects located offshore West Africa were investigated with a towed digital video telemetry system (DTS). Both digital stills and video footage were acquired. An extensive data set was obtained from over 13,000 usable photographs, allowing for characterisation of the different habitats present in terms of community composition and abundance. All observed fauna were identified to the lowest taxonomic level and enumerated when possible, with densities derived after the seabed area was calculated for each suitable photograph. This methodology allowed for consistent assessment of the different habitat types present, overcoming constraints, such as specific taxa that cannot be enumerated, such as sponges, corals or bryozoans, the presence of mobile and sessile species, or the level of taxonomic detail. Although this methodology will not enable a full characterisation of a deep sea community, in terms of species composition for instance, itt will allow a robust assessment of large areas of the deep sea in terms of sensitive habitats present and community

  20. A Moessbauer study of deep sea sediments

    International Nuclear Information System (INIS)

    Minai, Y.; Tominaga, T.; Furuta, T.; Kobayashi, K.

    1981-01-01

    In order to determine the chemical states of iron in deep sea sediments, Moessbauer spectra of the sediments collected from various areas of the Pacific have been measured. The Moessbauer spectra were composed of paramagnetic ferric, high-spin ferrous, and magnetic components. The correlation of their relative abundance to the sampling location and the kind of sediments may afford clues to infer the origin of each iron-bearing phase. (author)

  1. Microplastic pollution in deep-sea sediments

    International Nuclear Information System (INIS)

    Van Cauwenberghe, Lisbeth; Vanreusel, Ann; Mees, Jan; Janssen, Colin R.

    2013-01-01

    Microplastics are small plastic particles ( 3 was observed. •The depths from where these microplastics were recovered range from 1176 to 4843 m. •The sizes of the particles range from 75 to 161 μm at their largest cross-section. -- Here, we demonstrate that microplastics have invaded the marine environment to an extent that they appear to even be present in the remote deep sea

  2. The deep sea Acoustic Detection system AMADEUS

    International Nuclear Information System (INIS)

    Naumann, Christopher Lindsay

    2008-01-01

    As a part of the ANTARES neutrino telescope, the AMADEUS (ANTARES Modules for Acoustic Detection Under the Sea) system is an array of acoustical sensors designed to investigate the possibilities of acoustic detection of ultra-high energy neutrinos in the deep sea. The complete system will comprise a total of 36 acoustic sensors in six clusters on two of the ANTARES detector lines. With an inter-sensor spacing of about one metre inside the clusters and between 15 and 340 metres between the different clusters, it will cover a wide range of distances as will as provide a considerable lever arm for point source triangulation. Three of these clusters have already been deployed in 2007 and have been in operation since, currently yielding around 2GB of acoustic data per day. The remaining three clusters are scheduled to be deployed in May 2008 together with the final ANTARES detector line. Apart from proving the feasibility of operating an acoustic detection system in the deep sea, the main aim of this project is an in-depth survey of both the acoustic properties of the sea water and the acoustic background present at the detector site. It will also serve as a platform for the development and refinement of triggering, filtering and reconstruction algorithms for acoustic particle detection. In this presentation, a description of the acoustic sensor and read-out system is given, together with examples for the reconstruction and evaluation of the acoustic data.

  3. Extreme Longevity in Proteinaceous Deep-Sea Corals

    Energy Technology Data Exchange (ETDEWEB)

    Roark, E B; Guilderson, T P; Dunbar, R B; Fallon, S J; Mucciarone, D A

    2009-02-09

    Deep-sea corals are found on hard substrates on seamounts and continental margins world-wide at depths of 300 to {approx}3000 meters. Deep-sea coral communities are hotspots of deep ocean biomass and biodiversity, providing critical habitat for fish and invertebrates. Newly applied radiocarbon age date from the deep water proteinaceous corals Gerardia sp. and Leiopathes glaberrima show that radial growth rates are as low as 4 to 35 {micro}m yr{sup -1} and that individual colony longevities are on the order of thousands of years. The management and conservation of deep sea coral communities is challenged by their commercial harvest for the jewelry trade and damage caused by deep water fishing practices. In light of their unusual longevity, a better understanding of deep sea coral ecology and their interrelationships with associated benthic communities is needed to inform coherent international conservation strategies for these important deep-sea ecosystems.

  4. Ion transport in deep-sea sediments

    International Nuclear Information System (INIS)

    Heath, G.R.

    1979-01-01

    Initial assessment of the ability of deep-sea clays to contain nuclear waste is optimistic. Yet, the investigators have no delusions about the complexity of the natural geochemical system and the perturbations that may result from emplacement of thermally-hot waste cannisters. Even though they may never be able to predict the exact nature of all these perturbations, containment of the nuclides by the waste form/cannister system until most of the heat has decayed, and burial of the waste to a sufficient depth that the altered zone can be treated as a black box source of dissolved nuclides to the enclosing unperturbed sediment, encourage them to believe that ion migration in the deep seabed can be modeled accurately and that our preliminary estimates of migration rates are likely to be reasonably realistic

  5. Deep-Sea Corals: A New Oceanic Archive

    National Research Council Canada - National Science Library

    Adkins, Jess

    1998-01-01

    Deep-sea corals are an extraordinary new archive of deep ocean behavior. The species Desmophyllum cristagalli is a solitary coral composed of uranium rich, density banded aragonite that I have calibrated for several paleoclimate tracers...

  6. First biological measurements of deep-sea corals from the Red Sea.

    Science.gov (United States)

    Roder, C; Berumen, M L; Bouwmeester, J; Papathanassiou, E; Al-Suwailem, A; Voolstra, C R

    2013-10-03

    It is usually assumed that metabolic constraints restrict deep-sea corals to cold-water habitats, with 'deep-sea' and 'cold-water' corals often used as synonymous. Here we report on the first measurements of biological characters of deep-sea corals from the central Red Sea, where they occur at temperatures exceeding 20°C in highly oligotrophic and oxygen-limited waters. Low respiration rates, low calcification rates, and minimized tissue cover indicate that a reduced metabolism is one of the key adaptations to prevailing environmental conditions. We investigated four sites and encountered six species of which at least two appear to be undescribed. One species is previously reported from the Red Sea but occurs in deep cold waters outside the Red Sea raising interesting questions about presumed environmental constraints for other deep-sea corals. Our findings suggest that the present understanding of deep-sea coral persistence and resilience needs to be revisited.

  7. First biological measurements of deep-sea corals from the Red Sea.

    KAUST Repository

    Roder, Cornelia

    2013-10-03

    It is usually assumed that metabolic constraints restrict deep-sea corals to cold-water habitats, with \\'deep-sea\\' and \\'cold-water\\' corals often used as synonymous. Here we report on the first measurements of biological characters of deep-sea corals from the central Red Sea, where they occur at temperatures exceeding 20°C in highly oligotrophic and oxygen-limited waters. Low respiration rates, low calcification rates, and minimized tissue cover indicate that a reduced metabolism is one of the key adaptations to prevailing environmental conditions. We investigated four sites and encountered six species of which at least two appear to be undescribed. One species is previously reported from the Red Sea but occurs in deep cold waters outside the Red Sea raising interesting questions about presumed environmental constraints for other deep-sea corals. Our findings suggest that the present understanding of deep-sea coral persistence and resilience needs to be revisited.

  8. Taxonomic research on deep-sea macrofauna in the South China Sea using the Chinese deep-sea submersible Jiaolong.

    Science.gov (United States)

    Li, Xinzheng

    2017-07-01

    This paper reviews the taxonomic and biodiversity studies of deep-sea invertebrates in the South China Sea based on the samples collected by the Chinese manned deep-sea submersible Jiaolong. To date, 6 new species have been described, including the sponges Lophophysema eversa, Saccocalyx microhexactin and Semperella jiaolongae as well as the crustaceans Uroptychus jiaolongae, Uroptychus spinulosus and Globospongicola jiaolongi; some newly recorded species from the South China Sea have also been reported. The Bathymodiolus platifrons-Shinkaia crosnieri deep-sea cold seep community has been reported by Li (2015), as has the mitochondrial genome of the glass sponge L. eversa by Zhang et al. (2016). The population structures of two dominant species, the shrimp Shinkaia crosnieri and the mussel Bathymodiolus platifrons, from the cold seep Bathymodiolus platifrons-Shinkaia crosnieri community in the South China Sea and the hydrothermal vents in the Okinawa Trough, were compared using molecular analysis. The systematic position of the shrimp genus Globospongicola was discussed based on 16S rRNA gene sequences. © 2017 International Society of Zoological Sciences, Institute of Zoology/Chinese Academy of Sciences and John Wiley & Sons Australia, Ltd.

  9. A new procedure for deep sea mining tailings disposal

    NARCIS (Netherlands)

    Ma, W.; Schott, D.L.; Lodewijks, G.

    2017-01-01

    Deep sea mining tailings disposal is a new environmental challenge related to water pollution, mineral crust waste handling, and ocean biology. The objective of this paper is to propose a new tailings disposal procedure for the deep sea mining industry. Through comparisons of the tailings disposal

  10. The dynamics of biogeographic ranges in the deep sea.

    Science.gov (United States)

    McClain, Craig R; Hardy, Sarah Mincks

    2010-12-07

    Anthropogenic disturbances such as fishing, mining, oil drilling, bioprospecting, warming, and acidification in the deep sea are increasing, yet generalities about deep-sea biogeography remain elusive. Owing to the lack of perceived environmental variability and geographical barriers, ranges of deep-sea species were traditionally assumed to be exceedingly large. In contrast, seamount and chemosynthetic habitats with reported high endemicity challenge the broad applicability of a single biogeographic paradigm for the deep sea. New research benefiting from higher resolution sampling, molecular methods and public databases can now more rigorously examine dispersal distances and species ranges on the vast ocean floor. Here, we explore the major outstanding questions in deep-sea biogeography. Based on current evidence, many taxa appear broadly distributed across the deep sea, a pattern replicated in both the abyssal plains and specialized environments such as hydrothermal vents. Cold waters may slow larval metabolism and development augmenting the great intrinsic ability for dispersal among many deep-sea species. Currents, environmental shifts, and topography can prove to be dispersal barriers but are often semipermeable. Evidence of historical events such as points of faunal origin and climatic fluctuations are also evident in contemporary biogeographic ranges. Continued synthetic analysis, database construction, theoretical advancement and field sampling will be required to further refine hypotheses regarding deep-sea biogeography.

  11. Authigenic gypsum in a deep sea core from Southeastern Arabian Sea

    Digital Repository Service at National Institute of Oceanography (India)

    Guptha, M.V.S.

    Authigenic gypsum has been encountered in a deep sea core RC9-157 from the southeastern Arabian Sea at a depth of 4111 m which is a zone of lysocline. The formation of gypsum in the deep sea region is attributed to the prevailing sulphate rich...

  12. Light at deep sea hydrothermal vents

    Science.gov (United States)

    Van Dover, Cindy Lee; Cann, J. R.; Cavanaugh, Colleen; Chamberlain, Steven; Delaney, John R.; Janecky, David; Imhoff, Johannes; Tyson, J. Anthony

    We usually think of the bottom of the sea as a dark environment, lit only by flashes of bioluminescent light. Discovery of light associated with geothermal processes at deep sea hydrothermal vents forces us to qualify our textbook descriptions of the seafloor as a uniformly dark environment. While a very dim glow emitted from high temperature (350°) vents (black smokers) at mid-oceanic ridge spreading centers has been documented [Van Dover et al, 1988], the source of this light and its role, if any, in the evolution and adaptation of photobiochemical processes have yet to be determined. Preliminary studies indicate that thermal radiation alone may account for the “glow” ]Smith and Delaney, 1989] and that a novel photoreceptor in shrimp-colonizing black smoker chimneys may detect this “glow” [Van Dover et al., 1989; Pelli and Chamberlain, 1989]. A more controversial question, posed by C. L. Van Dover, J. R. Cann, and J. R. Delaney at the 1993 LITE Workshop at the Woods Hole Oceanographic Institution in Massachusetts, is whether there may be sufficient light of appropriate wavelengths to support geothermally driven photosynthesis by microorganisms.

  13. A deep sea community at the Kebrit brine pool in the Red Sea

    KAUST Repository

    Vestheim, Hege; Kaartvedt, Stein

    2015-01-01

    Approximately 25 deep sea brine pools occur along the mid axis of the Red Sea. These hypersaline, anoxic, and acidic environments have previously been reported to host diverse microbial communities. We visited the Kebrit brine pool in April 2013

  14. Nuclear wastes beneath the deep sea floor

    International Nuclear Information System (INIS)

    Bishop, W.P.; Hollister, C.D.

    1974-01-01

    Projections of energy demands for the year 2000 show that nuclear power will likely be one of our energy sources. But the benefits of nuclear power must be balanced against the drawbacks of its by-product: high-level wastes. While it may become possible to completely destroy or eliminate these wastes, it is at least equally possible that we may have to dispose of them on earth in such a way as to assure their isolation from man for periods of the order of a million years. Undersea regions in the middle of tectonic plates and in the approximate center of major current gyres offer some conceptual promise for waste disposal because of their geologic stability and comparatively low organic productivity. The advantages of this concept and the types of detailed information needed for its accurate assessment are discussed. The technical feasibility of permanent disposal beneath the deep sea floor cannot be accurately assessed with present knowledge, and there is a need for a thorough study of the types and rates of processes that affect this part of the earth's surface. Basic oceanographic research aimed at understanding these processes is yielding answers that apply to this societal need. (U.S.)

  15. U.V. repair in deep-sea bacteria

    International Nuclear Information System (INIS)

    Lutz, L.; Yayanos, A.A.

    1986-01-01

    Exposure of cells to light of less than 320 nanometers wavelengths may lead to lethal lesions and perhaps carcinogenesis. Many organisms have evolved mechanisms to repair U.V. light-induced damage. Organisms such as deep-sea bacteria are presumably never exposed to U.V. light and perhaps occasionally to visible from bioluminescence. Thus, the repair of U.V. damage in deep-sea bacterial DNA might be inefficient and repair by photoreactivation unlikely. The bacteria utilized in this investigation are temperature sensitive and barophilic. Four deep-sea isolates were chosen for this study: PE-36 from 3584 m, CNPT-3 from 5782 m, HS-34 from 5682 m, and MT-41 from 10,476 m, all are from the North Pacific ocean. The deep-sea extends from 1100 m to depths greater than 7000 m. It is a region of relatively uniform conditions. The temperature ranges from 5 to -1 0 C. There is no solar light in the deep-sea. Deep-sea bacteria are sensitive to U.V. light; in fact more sensitive than a variety of terrestrial and sea-surface bacteria. All four isolates demonstrate thymine dimer repair. Photoreactivation was observed in only MT-41. The other strains from shallower depths displayed no photoreactivation. The presence of DNA sequences homologous to the rec A, uvr A, B, and C and phr genes of E. coli have been examined by Southern hybridization techniques

  16. The biomass of the deep-sea benthopelagic plankton

    Science.gov (United States)

    Wishner, K. F.

    1980-04-01

    Deep-sea benthopelagic plankton samples were collected with a specially designed opening-closing net system 10 to 100 m above the bottom in five different oceanic regions at depths from 1000 to 4700 m. Benthopelagic plankton biomasses decrease exponentially with depth. At 1000 m the biomass is about 1% that of the surface zooplankton, at 5000 m about 0.1%. Effects of differences in surface primary productivity on deep-sea plankton biomass are much less than the effect of depth and are detectable only in a few comparisons of extreme oceanic regions. The biomass at 10 m above the bottom is greater than that at 100 m above the bottom (in a three-sample comparison), which could be a consequence of an enriched near-bottom environment. The deep-sea plankton biomass in the Red Sea is anomalously low. This may be due to increased decomposition rates in the warm (22°C) deep Red Sea water, which prevent much detritus from reaching the deep sea. A model of organic carbon utilization in the benthic boundary layer (bottom 100 m), incorporating results from deep-sea sediment trap and respiration studies, indicates that the benthopelagic plankton use only a small amount of the organic carbon flux. A large fraction of the flux is unaccounted for by present estimates of benthic and benthopelagic respiration.

  17. Challenging oil bioremediation at deep-sea hydrostatic pressure

    Directory of Open Access Journals (Sweden)

    Alberto Scoma

    2016-08-01

    Full Text Available The Deepwater Horizon (DWH accident has brought oil contamination of deep-sea environments to worldwide attention. The risk for new deep-sea spills is not expected to decrease in the future, as political pressure mounts to access deep-water fossil reserves, and poorly tested technologies are used to access oil. This also applies to the response to oil-contamination events, with bioremediation the only (biotechnology presently available to combat deep-sea spills. Many questions about the fate of petroleum-hydrocarbons at deep-sea remain unanswered, as much as the main constraints limiting bioremediation under increased hydrostatic pressures and low temperatures. The microbial pathways fueling oil take up are unclear, and the mild upregulation observed for beta-oxidation-related genes in both water and sediments contrasts with the high amount of alkanes present in the spilled-oil. The fate of solid alkanes (tar and that of hydrocarbons degradation rates was largely overlooked, as the reason why the most predominant hydrocarbonoclastic genera were not enriched at deep-sea, despite being present at hydrocarbon seeps at the Gulf of Mexico. This mini-review aims at highlighting the missing information in the field, proposing a holistic approach where in situ and ex situ studies are integrated to reveal the principal mechanisms accounting for deep-sea oil bioremediation.

  18. Deep Sea Coral National Observation Database, Northeast Region

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The national database of deep sea coral observations. Northeast version 1.0. * This database was developed by the NOAA NOS NCCOS CCMA Biogeography office as part of...

  19. The MEUST deep sea infrastructure in the Toulon site

    Directory of Open Access Journals (Sweden)

    Lamare Patrick

    2016-01-01

    Full Text Available The MEUST infrastructure (Mediterranean Eurocentre for Underwater Sciences and Technologies is a permanent deep sea cabled infrastructure currently being deployed off shore of Toulon, France. The design and the status of the infrastructure are presented.

  20. Deep-sea impact experiments and their future requirements

    Digital Repository Service at National Institute of Oceanography (India)

    Sharma, R.

    In recent years, several experiments to assess the potential impacts due to deep-sea mining in the Pacific as well as the Indian Oceans have indicated the immediate changes and restoration patterns of environmental conditions in the marine ecosystem...

  1. Call to protect deep-sea coral, sponge ecosystems

    Science.gov (United States)

    Showstack, Randy

    2004-03-01

    More than 1100 scientists are signatories to a 15 February consensus statement calling for the protection of deep sea coral and sponge ecosystems. The statement indicates that ``the greatest human threat'' to these ecosystems ``is commercial fishing, especially bottom trawling.''

  2. Diversity and adaptations of deep-sea microorganisms

    Digital Repository Service at National Institute of Oceanography (India)

    Raghukumar, C.

    -tolerant enzymes, natural products of potential use in human health management and environmental bioremediation using solvent-tolerant microorganisms are some of the potential biotechnological applications of these deep-sea microbes....

  3. A new procedure for deep sea mining tailings disposal

    OpenAIRE

    Ma, W.; Schott, D.L.; Lodewijks, G.

    2017-01-01

    Deep sea mining tailings disposal is a new environmental challenge related to water pollution, mineral crust waste handling, and ocean biology. The objective of this paper is to propose a new tailings disposal procedure for the deep sea mining industry. Through comparisons of the tailings disposal methods which exist in on-land mining and the coastal mining fields, a new tailings disposal procedure, i.e., the submarine–backfill–dam–reuse (SBDR) tailings disposal procedure, is proposed. It com...

  4. Erbium-doped fiber lasers as deep-sea hydrophones

    International Nuclear Information System (INIS)

    Bagnoli, P.E.; Beverini, N.; Bouhadef, B.; Castorina, E.; Falchini, E.; Falciai, R.; Flaminio, V.; Maccioni, E.; Morganti, M.; Sorrentino, F.; Stefani, F.; Trono, C.

    2006-01-01

    The present work describes the development of a hydrophone prototype for deep-sea acoustic detection. The base-sensitive element is a single-mode erbium-doped fiber laser. The high sensitivity of these sensors makes them particularly suitable for a wide range of deep-sea acoustic applications, including geological and marine mammals surveys and above all as acoustic detectors in under-water telescopes for high-energy neutrinos

  5. First biological measurements of deep-sea corals from the Red Sea

    OpenAIRE

    C. Roder; M. L. Berumen; J. Bouwmeester; E. Papathanassiou; A. Al-Suwailem; C. R. Voolstra

    2013-01-01

    It is usually assumed that metabolic constraints restrict deep-sea corals to cold-water habitats, with ?deep-sea? and ?cold-water? corals often used as synonymous. Here we report on the first measurements of biological characters of deep-sea corals from the central Red Sea, where they occur at temperatures exceeding 20?C in highly oligotrophic and oxygen-limited waters. Low respiration rates, low calcification rates, and minimized tissue cover indicate that a reduced metabolism is one of the ...

  6. Bipolar gene flow in deep-sea benthic foraminifera

    DEFF Research Database (Denmark)

    Pawlowski, J.; Fahrni, J.; Lecroq, B.

    2007-01-01

    Despite its often featureless appearance, the deep-ocean floor includes some of the most diverse habitats on Earth. However, the accurate assessment of global deep-sea diversity is impeded by a paucity of data on the geographical ranges of bottom-dwelling species, particularly at the genetic leve...

  7. Deep-sea coral research and technology program: Alaska deep-sea coral and sponge initiative final report

    Science.gov (United States)

    Rooper, Chris; Stone, Robert P.; Etnoyer, Peter; Conrath, Christina; Reynolds, Jennifer; Greene, H. Gary; Williams, Branwen; Salgado, Enrique; Morrison, Cheryl L.; Waller, Rhian G.; Demopoulos, Amanda W.J.

    2017-01-01

    Deep-sea coral and sponge ecosystems are widespread throughout most of Alaska’s marine waters. In some places, such as the central and western Aleutian Islands, deep-sea coral and sponge resources can be extremely diverse and may rank among the most abundant deep-sea coral and sponge communities in the world. Many different species of fishes and invertebrates are associated with deep-sea coral and sponge communities in Alaska. Because of their biology, these benthic invertebrates are potentially impacted by climate change and ocean acidification. Deepsea coral and sponge ecosystems are also vulnerable to the effects of commercial fishing activities. Because of the size and scope of Alaska’s continental shelf and slope, the vast majority of the area has not been visually surveyed for deep-sea corals and sponges. NOAA’s Deep Sea Coral Research and Technology Program (DSCRTP) sponsored a field research program in the Alaska region between 2012–2015, referred to hereafter as the Alaska Initiative. The priorities for Alaska were derived from ongoing data needs and objectives identified by the DSCRTP, the North Pacific Fishery Management Council (NPFMC), and Essential Fish Habitat-Environmental Impact Statement (EFH-EIS) process.This report presents the results of 15 projects conducted using DSCRTP funds from 2012-2015. Three of the projects conducted as part of the Alaska deep-sea coral and sponge initiative included dedicated at-sea cruises and fieldwork spread across multiple years. These projects were the eastern Gulf of Alaska Primnoa pacifica study, the Aleutian Islands mapping study, and the Gulf of Alaska fish productivity study. In all, there were nine separate research cruises carried out with a total of 109 at-sea days conducting research. The remaining projects either used data and samples collected by the three major fieldwork projects or were piggy-backed onto existing research programs at the Alaska Fisheries Science Center (AFSC).

  8. Factors governing the deep ventilation of the Red Sea

    KAUST Repository

    Papadopoulos, Vassilis P.

    2015-11-19

    A variety of data based on hydrographic measurements, satellite observations, reanalysis databases, and meteorological observations are used to explore the interannual variability and factors governing the deep water formation in the northern Red Sea. Historical and recent hydrographic data consistently indicate that the ventilation of the near-bottom layer in the Red Sea is a robust feature of the thermohaline circulation. Dense water capable to reach the bottom layers of the Red Sea can be regularly produced mostly inside the Gulfs of Aqaba and Suez. Occasionally, during colder than usual winters, deep water formation may also take place over coastal areas in the northernmost end of the open Red Sea just outside the Gulfs of Aqaba and Suez. However, the origin as well as the amount of deep waters exhibit considerable interannual variability depending not only on atmospheric forcing but also on the water circulation over the northern Red Sea. Analysis of several recent winters shows that the strength of the cyclonic gyre prevailing in the northernmost part of the basin can effectively influence the sea surface temperature (SST) and intensify or moderate the winter surface cooling. Upwelling associated with periods of persistent gyre circulation lowers the SST over the northernmost part of the Red Sea and can produce colder than normal winter SST even without extreme heat loss by the sea surface. In addition, the occasional persistence of the cyclonic gyre feeds the surface layers of the northern Red Sea with nutrients, considerably increasing the phytoplankton biomass.

  9. 40Ar/39Ar studies of deep sea igneous rocks

    International Nuclear Information System (INIS)

    Seidemann, D.

    1978-01-01

    An attempt to date deep-sea igneous rocks reliably was made using the 40 Ar/ 39 Ar dating technique. It was determined that the 40 Ar/ 39 Ar incremental release technique could not be used to eliminate the effects of excess radiogenic 40 Ar in deep-sea basalts. Excess 40 Ar is released throughout the extraction temperature range and cannot be distinguished from 40 Ar generated by in situ 40 K decay. The problem of the reduction of K-Ar dates associated with sea water alteration of deep-sea igneous rocks could not be resolved using the 40 Ar/ 39 Ar technique. Irradiation induced 39 Ar loss and/or redistribution in fine-grained and altered igneous rocks results in age spectra that are artifacts of the experimental procedure and only partly reflect the geologic history of the sample. Therefore, caution must be used in attributing significance to age spectra of fine grained and altered deep-sea igneous rocks. Effects of 39 Ar recoil are not important for either medium-grained (or coarser) deep-sea rocks or glasses because only a small fraction of the 39 Ar recoils to channels of easy diffusion, such as intergranular boundaries or cracks, during the irradiation. (author)

  10. Evolutionary process of deep-sea bathymodiolus mussels.

    Science.gov (United States)

    Miyazaki, Jun-Ichi; de Oliveira Martins, Leonardo; Fujita, Yuko; Matsumoto, Hiroto; Fujiwara, Yoshihiro

    2010-04-27

    Since the discovery of deep-sea chemosynthesis-based communities, much work has been done to clarify their organismal and environmental aspects. However, major topics remain to be resolved, including when and how organisms invade and adapt to deep-sea environments; whether strategies for invasion and adaptation are shared by different taxa or unique to each taxon; how organisms extend their distribution and diversity; and how they become isolated to speciate in continuous waters. Deep-sea mussels are one of the dominant organisms in chemosynthesis-based communities, thus investigations of their origin and evolution contribute to resolving questions about life in those communities. We investigated worldwide phylogenetic relationships of deep-sea Bathymodiolus mussels and their mytilid relatives by analyzing nucleotide sequences of the mitochondrial cytochrome c oxidase subunit I (COI) and NADH dehydrogenase subunit 4 (ND4) genes. Phylogenetic analysis of the concatenated sequence data showed that mussels of the subfamily Bathymodiolinae from vents and seeps were divided into four groups, and that mussels of the subfamily Modiolinae from sunken wood and whale carcasses assumed the outgroup position and shallow-water modioline mussels were positioned more distantly to the bathymodioline mussels. We provisionally hypothesized the evolutionary history of Bathymodilolus mussels by estimating evolutionary time under a relaxed molecular clock model. Diversification of bathymodioline mussels was initiated in the early Miocene, and subsequently diversification of the groups occurred in the early to middle Miocene. The phylogenetic relationships support the "Evolutionary stepping stone hypothesis," in which mytilid ancestors exploited sunken wood and whale carcasses in their progressive adaptation to deep-sea environments. This hypothesis is also supported by the evolutionary transition of symbiosis in that nutritional adaptation to the deep sea proceeded from extracellular

  11. Evolutionary process of deep-sea bathymodiolus mussels.

    Directory of Open Access Journals (Sweden)

    Jun-Ichi Miyazaki

    Full Text Available BACKGROUND: Since the discovery of deep-sea chemosynthesis-based communities, much work has been done to clarify their organismal and environmental aspects. However, major topics remain to be resolved, including when and how organisms invade and adapt to deep-sea environments; whether strategies for invasion and adaptation are shared by different taxa or unique to each taxon; how organisms extend their distribution and diversity; and how they become isolated to speciate in continuous waters. Deep-sea mussels are one of the dominant organisms in chemosynthesis-based communities, thus investigations of their origin and evolution contribute to resolving questions about life in those communities. METHODOLOGY/PRINCIPAL FINDING: We investigated worldwide phylogenetic relationships of deep-sea Bathymodiolus mussels and their mytilid relatives by analyzing nucleotide sequences of the mitochondrial cytochrome c oxidase subunit I (COI and NADH dehydrogenase subunit 4 (ND4 genes. Phylogenetic analysis of the concatenated sequence data showed that mussels of the subfamily Bathymodiolinae from vents and seeps were divided into four groups, and that mussels of the subfamily Modiolinae from sunken wood and whale carcasses assumed the outgroup position and shallow-water modioline mussels were positioned more distantly to the bathymodioline mussels. We provisionally hypothesized the evolutionary history of Bathymodilolus mussels by estimating evolutionary time under a relaxed molecular clock model. Diversification of bathymodioline mussels was initiated in the early Miocene, and subsequently diversification of the groups occurred in the early to middle Miocene. CONCLUSIONS/SIGNIFICANCE: The phylogenetic relationships support the "Evolutionary stepping stone hypothesis," in which mytilid ancestors exploited sunken wood and whale carcasses in their progressive adaptation to deep-sea environments. This hypothesis is also supported by the evolutionary transition of

  12. Seasonal variation of deep-sea bioluminescence in the Ionian Sea

    International Nuclear Information System (INIS)

    Craig, Jessica; Jamieson, Alan J.; Bagley, Philip M.; Priede, Imants G.

    2011-01-01

    The ICDeep (Image Intensified Charge Coupled Device for Deep sea research) profiler was used to measure the density of deep bioluminescent animals (BL) through the water column in the east, west and mid-Ionian Sea and in the Algerian Basin. A west to east decrease in BL density was found. Generalized additive modelling was used to investigate seasonal variation in the east and west Ionian Sea (NESTOR and NEMO neutrino telescope sites, respectively) from BL measurements in autumn 2008 and spring 2009. A significant seasonal effect was found in the west Ionian Sea (p<0.001), where a deep autumnal peak in BL density occurred between 500 and 2400 m. No significant seasonal variation in BL density was found in the east Ionian Sea (p=0.07). In both spring and autumn, significant differences in BL density were found through the water column between the east and west Ionian Sea (p<0.001).

  13. Seasonal variation of deep-sea bioluminescence in the Ionian Sea

    Energy Technology Data Exchange (ETDEWEB)

    Craig, Jessica, E-mail: j.craig@abdn.ac.u [University of Aberdeen, Oceanlab, Main Street, Newburgh, Aberdeenshire, AB41 6AA (United Kingdom); Jamieson, Alan J.; Bagley, Philip M.; Priede, Imants G. [University of Aberdeen, Oceanlab, Main Street, Newburgh, Aberdeenshire, AB41 6AA (United Kingdom)

    2011-01-21

    The ICDeep (Image Intensified Charge Coupled Device for Deep sea research) profiler was used to measure the density of deep bioluminescent animals (BL) through the water column in the east, west and mid-Ionian Sea and in the Algerian Basin. A west to east decrease in BL density was found. Generalized additive modelling was used to investigate seasonal variation in the east and west Ionian Sea (NESTOR and NEMO neutrino telescope sites, respectively) from BL measurements in autumn 2008 and spring 2009. A significant seasonal effect was found in the west Ionian Sea (p<0.001), where a deep autumnal peak in BL density occurred between 500 and 2400 m. No significant seasonal variation in BL density was found in the east Ionian Sea (p=0.07). In both spring and autumn, significant differences in BL density were found through the water column between the east and west Ionian Sea (p<0.001).

  14. Deep-sea biodiversity in the Mediterranean Sea: the known, the unknown, and the unknowable.

    Directory of Open Access Journals (Sweden)

    Roberto Danovaro

    Full Text Available Deep-sea ecosystems represent the largest biome of the global biosphere, but knowledge of their biodiversity is still scant. The Mediterranean basin has been proposed as a hot spot of terrestrial and coastal marine biodiversity but has been supposed to be impoverished of deep-sea species richness. We summarized all available information on benthic biodiversity (Prokaryotes, Foraminifera, Meiofauna, Macrofauna, and Megafauna in different deep-sea ecosystems of the Mediterranean Sea (200 to more than 4,000 m depth, including open slopes, deep basins, canyons, cold seeps, seamounts, deep-water corals and deep-hypersaline anoxic basins and analyzed overall longitudinal and bathymetric patterns. We show that in contrast to what was expected from the sharp decrease in organic carbon fluxes and reduced faunal abundance, the deep-sea biodiversity of both the eastern and the western basins of the Mediterranean Sea is similarly high. All of the biodiversity components, except Bacteria and Archaea, displayed a decreasing pattern with increasing water depth, but to a different extent for each component. Unlike patterns observed for faunal abundance, highest negative values of the slopes of the biodiversity patterns were observed for Meiofauna, followed by Macrofauna and Megafauna. Comparison of the biodiversity associated with open slopes, deep basins, canyons, and deep-water corals showed that the deep basins were the least diverse. Rarefaction curves allowed us to estimate the expected number of species for each benthic component in different bathymetric ranges. A large fraction of exclusive species was associated with each specific habitat or ecosystem. Thus, each deep-sea ecosystem contributes significantly to overall biodiversity. From theoretical extrapolations we estimate that the overall deep-sea Mediterranean biodiversity (excluding prokaryotes reaches approximately 2805 species of which about 66% is still undiscovered. Among the biotic components

  15. Species distribution models of tropical deep-sea snappers.

    Directory of Open Access Journals (Sweden)

    Céline Gomez

    Full Text Available Deep-sea fisheries provide an important source of protein to Pacific Island countries and territories that are highly dependent on fish for food security. However, spatial management of these deep-sea habitats is hindered by insufficient data. We developed species distribution models using spatially limited presence data for the main harvested species in the Western Central Pacific Ocean. We used bathymetric and water temperature data to develop presence-only species distribution models for the commercially exploited deep-sea snappers Etelis Cuvier 1828, Pristipomoides Valenciennes 1830, and Aphareus Cuvier 1830. We evaluated the performance of four different algorithms (CTA, GLM, MARS, and MAXENT within the BIOMOD framework to obtain an ensemble of predicted distributions. We projected these predictions across the Western Central Pacific Ocean to produce maps of potential deep-sea snapper distributions in 32 countries and territories. Depth was consistently the best predictor of presence for all species groups across all models. Bathymetric slope was consistently the poorest predictor. Temperature at depth was a good predictor of presence for GLM only. Model precision was highest for MAXENT and CTA. There were strong regional patterns in predicted distribution of suitable habitat, with the largest areas of suitable habitat (> 35% of the Exclusive Economic Zone predicted in seven South Pacific countries and territories (Fiji, Matthew & Hunter, Nauru, New Caledonia, Tonga, Vanuatu and Wallis & Futuna. Predicted habitat also varied among species, with the proportion of predicted habitat highest for Aphareus and lowest for Etelis. Despite data paucity, the relationship between deep-sea snapper presence and their environments was sufficiently strong to predict their distribution across a large area of the Pacific Ocean. Our results therefore provide a strong baseline for designing monitoring programs that balance resource exploitation and

  16. Ecosystem function and services provided by the deep sea

    Science.gov (United States)

    Thurber, A. R.; Sweetman, A. K.; Narayanaswamy, B. E.; Jones, D. O. B.; Ingels, J.; Hansman, R. L.

    2014-07-01

    The deep sea is often viewed as a vast, dark, remote, and inhospitable environment, yet the deep ocean and seafloor are crucial to our lives through the services that they provide. Our understanding of how the deep sea functions remains limited, but when treated synoptically, a diversity of supporting, provisioning, regulating and cultural services becomes apparent. The biological pump transports carbon from the atmosphere into deep-ocean water masses that are separated over prolonged periods, reducing the impact of anthropogenic carbon release. Microbial oxidation of methane keeps another potent greenhouse gas out of the atmosphere while trapping carbon in authigenic carbonates. Nutrient regeneration by all faunal size classes provides the elements necessary for fueling surface productivity and fisheries, and microbial processes detoxify a diversity of compounds. Each of these processes occur on a very small scale, yet considering the vast area over which they occur they become important for the global functioning of the ocean. The deep sea also provides a wealth of resources, including fish stocks, enormous bioprospecting potential, and elements and energy reserves that are currently being extracted and will be increasingly important in the near future. Society benefits from the intrigue and mystery, the strange life forms, and the great unknown that has acted as a muse for inspiration and imagination since near the beginning of civilization. While many functions occur on the scale of microns to meters and timescales up to years, the derived services that result are only useful after centuries of integrated activity. This vast dark habitat, which covers the majority of the globe, harbors processes that directly impact humans in a variety of ways; however, the same traits that differentiate it from terrestrial or shallow marine systems also result in a greater need for integrated spatial and temporal understanding as it experiences increased use by society. In

  17. Revealing Holobiont Structure and Function of Three Red Sea Deep-Sea Corals

    KAUST Repository

    Yum, Lauren

    2014-12-01

    Deep-sea corals have long been regarded as cold-water coral; however a reevaluation of their habitat limitations has been suggested after the discovery of deep-sea coral in the Red Sea where temperatures exceed 20˚C. To gain further insight into the biology of deep-sea corals at these temperatures, the work in this PhD employed a holotranscriptomic approach, looking at coral animal host and bacterial symbiont gene expression in Dendrophyllia sp., Eguchipsammia fistula, and Rhizotrochus sp. sampled from the deep Red Sea. Bacterial community composition was analyzed via amplicon-based 16S surveys and cultured bacterial strains were subjected to bioprospecting in order to gauge the pharmaceutical potential of coralassociated microbes. Coral host transcriptome data suggest that coral can employ mitochondrial hypometabolism, anaerobic glycolysis, and surface cilia to enhance mass transport rates to manage the low oxygen and highly oligotrophic Red Sea waters. In the microbial community associated with these corals, ribokinases and retron-type reverse transcriptases are abundantly expressed. In its first application to deep-sea coral associated microbial communities, 16S-based next-generation sequencing found that a single operational taxonomic unit can comprise the majority of sequence reads and that a large number of low abundance populations are present, which cannot be visualized with first generation sequencing. Bioactivity testing of selected bacterial isolates was surveyed over 100 cytological parameters with high content screening, covering several major organelles and key proteins involved in a variety of signaling cascades. Some of these cytological profiles were similar to those of several reference pharmacologically active compounds, which suggest that the bacteria isolates produce compounds with similar mechanisms of action as the reference compounds. The sum of this work offers several mechanisms by which Red Sea deep-sea corals cope with environmental

  18. Studies of the reproductive biology of deep-sea megabenthos

    International Nuclear Information System (INIS)

    Tyler, P.A.

    1987-07-01

    The final report describes the general biology and ecology of the 15 holothurians, 3 asteroids, 2 zoanthids and 1 crustacea species studied in Reports I-XIII, the sampling methods used and the station data. A summary of the histological, histochemical and biochemical results for the species examined is given. The data suggest that the reproductive processes in the deep-sea species examined are highly unlikely to be part of a pathway for the transfer of radionuclides from the deep-sea back to man. (author)

  19. Water transparency measurements in the deep Ionian Sea

    CERN Document Server

    Anassontzis, E G; Belias, A; Fotiou, A; Grammatikakis, G; Kontogiannis, H; Koske, P; Koutsoukos, S; Lykoussis, V; Markopoulos, E; Psallidas, A; Resvanis, L K; Siotis, I; Stavrakakis, S; Stavropoulos, G; Zhukov, V A

    2010-01-01

    A long optical base line spectrophotometer designed to measure light transmission in deep sea waters is described. The variable optical path length allows measurements without the need for absolute or external calibration. The spectrophotometer uses eight groups of uncollimated light sources emitting in the range 370–530 nm and was deployed at various depths at two locations in the Ionian Sea that are candidate sites for a future underwater neutrino telescope. Light transmission spectra at the two locations are presented and compared.

  20. Radioisotope fueled pulsed power generation system for propulsion and electrical power for deep space missions

    Science.gov (United States)

    Howe, Troy

    Space exploration missions to the moon, Mars, and other celestial bodies have allowed for great scientific leaps to enhance our knowledge of the universe; yet the astronomical cost of these missions limits their utility to only a few select agencies. Reducing the cost of exploratory space travel will give rise to a new era of exploration, where private investors, universities, and world governments can send satellites to far off planets and gather important data. By using radioisotope power sources and thermal storage devices, a duty cycle can be introduced to extract large amounts of energy in short amounts of time, allowing for efficient space travel. The same device can also provide electrical power for subsystems such as communications, drills, lasers, or other components that can provide valuable scientific information. This project examines the use of multiple radioisotope sources combined with a thermal capacitor using Phase Change Materials (PCMs) which can collect energy over a period of time. The result of this design culminates in a variety of possible spacecraft with their own varying costs, transit times, and objectives. Among the most promising are missions to Mars which cost less than 17M, missions that can provide power to satellite constellations for decades, or missions that can deliver large, Opportunity-sized (185kg) payloads to mars for less than 53M. All made available to a much wider range of customer with commercially available satellite launches from earth. The true cost of such progress though lies in the sometimes substantial increase in transit times for these missions.

  1. Oceanography related to deep sea waste disposal

    International Nuclear Information System (INIS)

    1978-09-01

    In connection with studies on the feasibility of the safe disposal of radioactive waste, from a large scale nuclear power programme, either on the bed of the deep ocean or within the deep ocean bed, preparation of the present document was commissioned by the (United Kingdom) Department of the Environment. It attempts (a) to summarize the present state of knowledge of the deep ocean environment relevant to the disposal options and assess the processes which could aid or hinder dispersal of material released from its container; (b) to identify areas of research in which more work is needed before the safety of disposal on, or beneath, the ocean bed can be assessed; and (c) to indicate which areas of research can or should be undertaken by British scientists. The programmes of international cooperation in this field are discussed. The report is divided into four chapters dealing respectively with geology and geophysics, geochemistry, physical oceanography and marine biology. (U.K.)

  2. Dynamic and static elastic moduli of North Sea and deep sea chalk

    DEFF Research Database (Denmark)

    Gommesen, Lars; Fabricius, Ida Lykke

    2001-01-01

    We have established an empirical relationship between the dynamic and the static mechanical properties of North Sea and deep sea chalk for a large porosity interval with respect to porosity, effective stress history and textural composition. The chalk investigated is from the Tor and Hod Formatio...

  3. Priapulus from the deep sea (Vermes, Priapulida)

    NARCIS (Netherlands)

    Land, van der J.

    1972-01-01

    INTRODUCTION The species of the genus Priapulus occur in rather cold water. Hence, their shallow-water distribution is restricted to northern and southern waters (fig. 1); there are only a few isolated records from sub-tropical localities. However, in deep water the genus apparently has a world-wide

  4. Age-dependent mixing of deep-sea sediments

    International Nuclear Information System (INIS)

    Smith, C.R.; Maggaard, L.; Pope, R.H.; DeMaster, D.J.

    1993-01-01

    Rates of bioturbation measured in deep-sea sediments commonly are tracer dependent; in particular, shorter lived radiotracers (such as 234 Th) often yield markedly higher diffusive mixing coefficients than their longer-lived counterparts (e.g., 210 Pb). At a single station in the 1,240-m deep Santa Catalina Basin, the authors document a strong negative correlation between bioturbation rate and tracer half-life. Sediment profiles of 234 Th (half-life = 24 days) yield an average mixing coefficient (60 cm 2 y -1 ) two orders of magnitude greater than that for 210 Pb (half-life = 22 y, mean mixing coefficient = 0.4 cm 2 y -1 ). A similar negative relationship between mixing rate and tracer time scale is observed at thirteen other deep-sea sites in which multiple radiotracers have been used to assess diffusive mixing rates. This relationship holds across a variety of radiotracer types and time scales. The authors hypothesize that this negative relationship results from age-dependent mixing, a process in which recently sedimented, food-rich particles are ingested and mixed at higher rates by deposit feeders than are older, food-poor particles. Results from an age-dependent mixing model demonstrate that this process indeed can yield the bioturbation-rate vs. tracer-time-scale correlations observed in deep-sea sediments. Field data on mixing rates of recently sedimented particles, as well as the radiotracer activity of deep-sea deposit feeders, provide strong support for the age-dependent mixing model. The presence of age-dependent mixing in deep-sea sediments may have major implications for diagenetic modeling, requiring a match between the characteristic time scales of mixing tracers and modeled reactants. 102 refs., 6 figs., 5 tabs

  5. Deep-Sea Microbes: Linking Biogeochemical Rates to -Omics Approaches

    Science.gov (United States)

    Herndl, G. J.; Sintes, E.; Bayer, B.; Bergauer, K.; Amano, C.; Hansman, R.; Garcia, J.; Reinthaler, T.

    2016-02-01

    Over the past decade substantial progress has been made in determining deep ocean microbial activity and resolving some of the enigmas in understanding the deep ocean carbon flux. Also, metagenomics approaches have shed light onto the dark ocean's microbes but linking -omics approaches to biogeochemical rate measurements are generally rare in microbial oceanography and even more so for the deep ocean. In this presentation, we will show by combining metagenomics, -proteomics and biogeochemical rate measurements on the bulk and single-cell level that deep-sea microbes exhibit characteristics of generalists with a large genome repertoire, versatile in utilizing substrate as revealed by metaproteomics. This is in striking contrast with the apparently rather uniform dissolved organic matter pool in the deep ocean. Combining the different -omics approaches with metabolic rate measurements, we will highlight some major inconsistencies and enigmas in our understanding of the carbon cycling and microbial food web structure in the dark ocean.

  6. Phosphate solubilizing bacteria: Comparison between coastal and deep sea sediments

    Digital Repository Service at National Institute of Oceanography (India)

    Biche, S.; Pandey, S.; Gonsalves, M.J.B.D.; Das, A.; Mascarenhas-Pereira, M.B.L.; LokaBharathi, P.A.

    in the CIB sediments (r=0.59) than in the coastal sediments (r= 0.22). It is apparent that the enzyme activity in the coastal sediments could be more for P mobilization and in the oligotrophic deep sea it could be both for P and C mobilization....

  7. Fungi and macroaggregation in deep-sea sediments

    Digital Repository Service at National Institute of Oceanography (India)

    Damare, S.R.; Raghukumar, C.

    Whereas fungi in terrestrial soils have been well studied, little is known of them in deep-sea sediments. Recent studies have demonstrated the presence of fungal hyphae in such sediments but in low abundance. We present evidence in this study...

  8. Radio-active waste disposal and deep-sea biology

    International Nuclear Information System (INIS)

    Rice, A.L.

    1978-01-01

    The deep-sea has been widely thought of as a remote, sparsely populated, and biologically inactive environment, well suited to receive the noxious products of nuclear fission processes. Much of what is known of abyssal biology tends to support this view, but there are a few disquieting contra-indications. The realisation, in recent years, that many animal groups show a previously unsuspected high species diversity in the deep-sea emphasized the paucity of our knowledge of this environment. More dramatically, the discovery of a large, active, and highly mobile abysso-bentho-pelagic fauna changed the whole concept of abyssal life. Finally, while there is little evidence for the existence of vertical migration patterns linking the deep-sea bottom communities with those of the overlying water layers, there are similarly too few negative results for the possibility of such transport mechanisms to be dismissed. In summary, biological knowledge of the abyss is insufficient to answer the questions raised in connection with deep-sea dumping, but in the absence of adequate answers it might be dangerous to ignore the questions

  9. Species diversity variations in Neogene deep-sea benthic

    Indian Academy of Sciences (India)

    Some species of benthic foraminifera are sensitive to changes in water mass properties whereas others are sensitive to organic fluxes and deep-sea oxygenation. Benthic faunal diversity has been found closely linked to food web, bottom water oxygen levels, and substrate and water mass stability. The present study is ...

  10. Diverse deep-sea fungi from the South China Sea and their antimicrobial activity.

    Science.gov (United States)

    Zhang, Xiao-Yong; Zhang, Yun; Xu, Xin-Ya; Qi, Shu-Hua

    2013-11-01

    We investigated the diversity of fungal communities in nine different deep-sea sediment samples of the South China Sea by culture-dependent methods followed by analysis of fungal internal transcribed spacer (ITS) sequences. Although 14 out of 27 identified species were reported in a previous study, 13 species were isolated from sediments of deep-sea environments for the first report. Moreover, these ITS sequences of six isolates shared 84-92 % similarity with their closest matches in GenBank, which suggested that they might be novel phylotypes of genera Ajellomyces, Podosordaria, Torula, and Xylaria. The antimicrobial activities of these fungal isolates were explored using a double-layer technique. A relatively high proportion (56 %) of fungal isolates exhibited antimicrobial activity against at least one pathogenic bacterium or fungus among four marine pathogenic microbes (Micrococcus luteus, Pseudoaltermonas piscida, Aspergerillus versicolor, and A. sydowii). Out of these antimicrobial fungi, the genera Arthrinium, Aspergillus, and Penicillium exhibited antibacterial and antifungal activities, while genus Aureobasidium displayed only antibacterial activity, and genera Acremonium, Cladosporium, Geomyces, and Phaeosphaeriopsis displayed only antifungal activity. To our knowledge, this is the first report to investigate the diversity and antimicrobial activity of culturable deep-sea-derived fungi in the South China Sea. These results suggest that diverse deep-sea fungi from the South China Sea are a potential source for antibiotics' discovery and further increase the pool of fungi available for natural bioactive product screening.

  11. Sorption of americium and neptunium by deep-sea sediments

    International Nuclear Information System (INIS)

    Higgo, J.J.W.; Rees, L.V.C.; Cronan, D.S.

    1983-01-01

    The sorption and desorption of americium and neptunium by a wide range of deep-sea sediments from natural sea water at 4 0 C has been studied using a carefully controlled batch technique. All the sediments studied should form an excellent barrier to the migration of americium since distribution coefficients were uniformly greater than 10 5 and the sorption-desorption reaction may not be reversible. The sorption of neptunium was reversible and, except for one red clay, the distribution coefficients were greater than 10 3 for all the sediments investigated. Nevertheless the migration of neptunium should also be effectively retarded by most deep-sea sediments even under relatively oxidizing conditions. The neptunium in solution remained in the V oxidation state throughout the experiments. Under the experimental conditions used colloidal americium was trapped by the sediment and solubility did not seem to be the controlling factor in the desorption of americium. (Auth.)

  12. Plastic microfibre ingestion by deep-sea organisms

    Science.gov (United States)

    Taylor, M. L.; Gwinnett, C.; Robinson, L. F.; Woodall, L. C.

    2016-09-01

    Plastic waste is a distinctive indicator of the world-wide impact of anthropogenic activities. Both macro- and micro-plastics are found in the ocean, but as yet little is known about their ultimate fate and their impact on marine ecosystems. In this study we present the first evidence that microplastics are already becoming integrated into deep-water organisms. By examining organisms that live on the deep-sea floor we show that plastic microfibres are ingested and internalised by members of at least three major phyla with different feeding mechanisms. These results demonstrate that, despite its remote location, the deep sea and its fragile habitats are already being exposed to human waste to the extent that diverse organisms are ingesting microplastics.

  13. Worldwide Analysis of Sedimentary DNA Reveals Major Gaps in Taxonomic Knowledge of Deep-Sea Benthos

    DEFF Research Database (Denmark)

    Sinniger, Frédéric; Pawlowski, Jan; Harii, Saki

    2016-01-01

    in 39 deep-sea sediment samples from bathyal and abyssal depths worldwide. The eDNA dataset was dominated by meiobenthic taxa and we identified all animal phyla commonly found in the deep-sea benthos; yet, the diversity within these phyla remains largely unknown. The large numbers of taxonomically...... for pure and applied deep-sea environmental research but also emphasizes the necessity to integrate such new approaches with traditional morphology-based examination of deep-sea organisms....

  14. Monitoring the impact of simulated deep-sea mining in Central Indian Basin

    Digital Repository Service at National Institute of Oceanography (India)

    Sharma, R.; Nath, B.N.; Jaisankar, S.

    Monitoring the Impact of Simulated Deep-sea Mining in Central Indian Basin R. SHARMA, B. NAGENDER NATH, AND S. JAI SANKAR National Institute of Oceanography, Dona Paula, Goa, India Monitoring of deep-sea disturbances, natural or man-made, has gained... has shown a partial recovery of the benthic ecosystem, with indications of restoration and recolonization. Keywords deep-sea mining, environmental impact, Central Indian Basin Deep-sea mineral deposits such as the polymetallic nodules and crusts...

  15. Deep water characteristics and circulation in the South China Sea

    Science.gov (United States)

    Wang, Aimei; Du, Yan; Peng, Shiqiu; Liu, Kexiu; Huang, Rui Xin

    2018-04-01

    This study investigates the deep circulation in the South China Sea (SCS) using oceanographic observations combined with results from a bottom layer reduced gravity model. The SCS water, 2000 m below the surface, is quite different from that in the adjacent Pacific Ocean, and it is characterized by its low dissolved oxygen (DO), high temperature and low salinity. The horizontal distribution of deep water properties indicates a basin-scale cyclonic circulation driven by the Luzon overflow. The results of the bottom layer reduced gravity model are consistent with the existence of the cyclonic circulation in the deep SCS. The circulation is stronger at the northern/western boundary. After overflowing the sill of the Luzon Strait, the deep water moves broadly southwestward, constrained by the 3500 m isobath. The broadening of the southward flow is induced by the downwelling velocity in the interior of the deep basin. The main deep circulation bifurcates into two branches after the Zhongsha Islands. The southward branch continues flowing along the 3500 m isobath, and the eastward branch forms the sub-basin scale cyclonic circulation around the seamounts in the central deep SCS. The returning flow along the east boundary is fairly weak. The numerical experiments of the bottom layer reduced gravity model reveal the important roles of topography, bottom friction, and the upwelling/downwelling pattern in controlling the spatial structure, particularly the strong, deep western boundary current.

  16. Indian deep-sea environment experiment (INDEX): Monitoring the restoration of marine enviroment after artificial disturbance to simulate deep-sea mining in central Indian Basin

    Digital Repository Service at National Institute of Oceanography (India)

    Sharma, R.

    the restoration of marine environment after artificial disturbance to simulate deep-sea mining in Central Indian Basin Guest Editor Rahul Sharma Note from guest editor A special issue on Indian Deep-sea Environment Experiment (INDEX) conducted by the scientists... in Geochemical Associations in Artificially Disturbed Deep-Sea Sediments B. Nagender Nath, G. Parthiban, S. Banaulikar, and Subhadeep Sarkar Marine Georesources and Geotechnology, 24:61–62, 2006 Copyright # Taylor & Francis Group, LLC ISSN: 1064-119X print/1521...

  17. Deep Coherent Vortices and Their Sea Surface Expressions

    Science.gov (United States)

    Ienna, Federico; Bashmachnikov, Igor; Dias, Joaquim; Peliz, Alvaro

    2017-04-01

    Mediterranean Water eddies, known as Meddies, are an important dynamic process occurring at depths of 1000-meters in the Northeast Atlantic Ocean. Meddies occur as a direct result of the Mediterranean Outflow exiting through the Gibraltar Strait, and represent a prevalent mechanism that can be found extensively throughout the ocean. Moreover, Meddy cores are known to produce measurable expressions at the sea surface in the form of rotating coherent vortices, not only affecting the sea surface from beneath, but also allowing for the possibility to remotely study these deep phenomena through data gathered at the sea surface. While many past studies have focused on the properties of Meddy cores, only a handful of studies focus on the physical characteristics and behavior of the surface expressions produced. Are Meddy surface expressions different from other like vortices that dominate the physical ocean surface? What are the relationships between deep and surface mechanisms, and do any feedbacks exist? To shed light on these questions, we investigate the relationship between Meddies and their sea-surface expressions through observations using in-situ float and drifter profiles and satellite altimetry. A total of 782 Meddy cores were examined in the Northeast Atlantic using temperature and salinity data obtained by CTD and Argo during the Mecanismos de transporte e de dispersão da Água Mediterrânica no Atlântico Nordeste (MEDTRANS) project, and their corresponding sea-level expressions were geo-temporally matched in satellite altimetry data. We report several statistical properties of the sea-surface expressions of Meddies, including their mean diameter and vertical magnitude, and compare the properties of their surface features to the underlying Meddy cores. We investigate how the deep core affects the surface, and whether surface expressions may in return yield information about the underlying cores. Additionally, we examine the variability of the surface

  18. Deep and intermediate mediterranean water in the western Alboran Sea

    Science.gov (United States)

    Parrilla, Gregorio; Kinder, Thomas H.; Preller, Ruth H.

    1986-01-01

    Hydrographic and current meter data, obtained during June to October 1982, and numerical model experiments are used to study the distribution and flow of Mediterranean waters in the western Alboran Sea. The Intermediate Water is more pronounced in the northern three-fourths of the sea, but its distribution is patchy as manifested by variability of the temperature and salinity maxima at scales ≤10 km. Current meters in the lower Intermediate Water showed mean flow toward the Strait at 2 cm s -1. A reversal of this flow lasted about 2 weeks. A rough estimate of the mean westward Intermediate Water transport was 0.4 × 10 6 m 3 s -1, about one-third of the total outflow, so that the best estimates of the contributions of traditionally defined Intermediate Water and Deep Water account for only about one-half of the total outflow. The Deep Water was uplifted against the southern continental slope from Alboran Island (3°W) to the Strait. There was also a similar but much weaker banking against the Spanish slope, but a deep current record showed that the eastward recirculation implied by this banking is probably intermittent. Two-layer numerical model experiments simulated the Intermediate Water flow with a flat bottom and the Deep Water with realistic bottom topography. Both experiments replicated the major circulation features, and the Intermediate Water flow was concentrated in the north because of rotation and the Deep Water flow in the south because of topographic control.

  19. A deep sea community at the Kebrit brine pool in the Red Sea

    KAUST Repository

    Vestheim, Hege

    2015-02-26

    Approximately 25 deep sea brine pools occur along the mid axis of the Red Sea. These hypersaline, anoxic, and acidic environments have previously been reported to host diverse microbial communities. We visited the Kebrit brine pool in April 2013 and found macrofauna present just above the brine–seawater interface (~1465 m). In particular, inactive sulfur chimneys had associated epifauna of sea anemones, sabellid type polychaetes, and hydroids, and infauna consisting of capitellid polychaetes, gastropods of the genus Laeviphitus (fam. Elachisinidae), and top snails of the family Cocculinidae. The deep Red Sea generally is regarded as extremely poor in benthos. We hypothesize that the periphery along the Kebrit holds increased biomass and biodiversity that are sustained by prokaryotes associated with the brine pool or co-occurring seeps.

  20. The deep-sea hub of the ANTARES neutrino telescope

    Energy Technology Data Exchange (ETDEWEB)

    Anghinolfi, M. [INFN Sezione di Genova, Via Dodecaneso 33, I-16146 Genova (Italy); Calzas, A. [Centre de Physique des Particules de Marseille (CNRS/IN2P3), Universite de la Mediterranee, 13288 Marseille (France); Dinkespiler, B. [Centre de Physique des Particules de Marseille (CNRS/IN2P3), Universite de la Mediterranee, 13288 Marseille (France); Cuneo, S. [INFN Laboratori Nazionali del Sud, Via S. Sofia 44, I-95123 Catania (Italy); Favard, S. [Centre de Physique des Particules de Marseille (CNRS/IN2P3), Universite de la Mediterranee, 13288 Marseille (France); Hallewell, G. [Centre de Physique des Particules de Marseille (CNRS/IN2P3), Universite de la Mediterranee, 13288 Marseille (France)]. E-mail: gregh@cppm.in2p3.fr; Jaquet, M. [Centre de Physique des Particules de Marseille (CNRS/IN2P3), Universite de la Mediterranee, 13288 Marseille (France); Musumeci, M. [INFN Laboratori Nazionali del Sud, Via S. Sofia 44, I-95123 Catania (Italy); Papaleo, R. [INFN Laboratori Nazionali del Sud, Via S. Sofia 44, I-95123 Catania (Italy); Raia, G. [INFN Laboratori Nazionali del Sud, Via S. Sofia 44, I-95123 Catania (Italy); Valdy, P. [IFREMER - Institut francais de recherche pour l' exploitation de la mer, Centre de La Seyne, 83500 La Seyne sur mer (France); Vernin, P. [DSM-DAPNIA, CEA SACLAY, 91191 Gif sur Yvette Cedex (France)

    2006-11-15

    The ANTARES neutrino telescope, currently under construction at 2500 m depth off the French Mediterranean coast, will contain 12 detection lines, powered and read out through a deep-sea junction box (JB) hub. Electrical energy from the shore station is distributed through a transformer with multiple secondary windings and a plugboard with 16 deep sea-mateable electro-optic connectors. Connections are made to the JB outputs using manned or remotely operated submersible vehicles. The triply redundant power management and slow control system is based on two identical AC-powered systems, communicating with the shore through 160 Mb/s fibre G-links and a third battery-powered system using a slower link. We describe the power and slow control systems of the underwater hub.

  1. The deep-sea hub of the ANTARES neutrino telescope

    International Nuclear Information System (INIS)

    Anghinolfi, M.; Calzas, A.; Dinkespiler, B.; Cuneo, S.; Favard, S.; Hallewell, G.; Jaquet, M.; Musumeci, M.; Papaleo, R.; Raia, G.; Valdy, P.; Vernin, P.

    2006-01-01

    The ANTARES neutrino telescope, currently under construction at 2500 m depth off the French Mediterranean coast, will contain 12 detection lines, powered and read out through a deep-sea junction box (JB) hub. Electrical energy from the shore station is distributed through a transformer with multiple secondary windings and a plugboard with 16 deep sea-mateable electro-optic connectors. Connections are made to the JB outputs using manned or remotely operated submersible vehicles. The triply redundant power management and slow control system is based on two identical AC-powered systems, communicating with the shore through 160 Mb/s fibre G-links and a third battery-powered system using a slower link. We describe the power and slow control systems of the underwater hub

  2. Alchemy or Science? Compromising Archaeology in the Deep Sea

    Science.gov (United States)

    Adams, Jonathan

    2007-06-01

    In the torrid debate between archaeology and treasure hunting, compromise is often suggested as the pragmatic solution, especially for archaeology carried out either in deep water or beyond the constraints that commonly regulate such activities in territorial seas. Both the wisdom and the need for such compromise have even been advocated by some archaeologists, particularly in forums such as the internet and conferences. This paper argues that such a compromise is impossible, not in order to fuel confrontation but simply because of the nature of any academic discipline. We can define what archaeology is in terms of its aims, theories, methods and ethics, so combining it with an activity founded on opposing principles must transform it into something else. The way forward for archaeology in the deep sea does not lie in a contradictory realignment of archaeology’s goals but in collaborative research designed to mesh with emerging national and regional research and management plans.

  3. Food web structure and vulnerability of a deep-sea ecosystem in the NW Mediterranean Sea

    OpenAIRE

    Tecchio, Samuele; Coll, Marta; Christensen, Villy; Company, Joan B.; Ramirez-Llodra, Eva; Sarda, Francisco

    2013-01-01

    There is increasing fishing pressure on the continental margins of the oceans, and this raises concerns about the vulnerability of the ecosystems thriving there. The current knowledge of the biology of deep-water fish species identifies potential reduced resilience to anthropogenic disturbance. However, there are extreme difficulties in sampling the deep sea, resulting in poorly resolved and indirectly obtained food-web relationships. Here, we modelled the flows and biomasses of a Mediterrane...

  4. Far red bioluminescence from two deep-sea fishes.

    Science.gov (United States)

    Widder, E A; Latz, M I; Herring, P J; Case, J F

    1984-08-03

    Spectral measurements of red bioluminescence were obtained from the deep-sea stomiatoid fishes Aristostomias scintillans (Gilbert) and Malacosteus niger (Ayres). Red luminescence from suborbital light organs extends to the near infrared, with peak emission at approximately 705 nanometers in the far red. These fishes also have postorbital light organs that emit blue luminescence with maxima between 470 and 480 nanometers. The red bioluminescence may be due to an energy transfer system and wavelength-selective filtering.

  5. How deep-sea wood falls sustain chemosynthetic life.

    Directory of Open Access Journals (Sweden)

    Christina Bienhold

    Full Text Available Large organic food falls to the deep sea--such as whale carcasses and wood logs--are known to serve as stepping stones for the dispersal of highly adapted chemosynthetic organisms inhabiting hot vents and cold seeps. Here we investigated the biogeochemical and microbiological processes leading to the development of sulfidic niches by deploying wood colonization experiments at a depth of 1690 m in the Eastern Mediterranean for one year. Wood-boring bivalves of the genus Xylophaga played a key role in the degradation of the wood logs, facilitating the development of anoxic zones and anaerobic microbial processes such as sulfate reduction. Fauna and bacteria associated with the wood included types reported from other deep-sea habitats including chemosynthetic ecosystems, confirming the potential role of large organic food falls as biodiversity hot spots and stepping stones for vent and seep communities. Specific bacterial communities developed on and around the wood falls within one year and were distinct from freshly submerged wood and background sediments. These included sulfate-reducing and cellulolytic bacterial taxa, which are likely to play an important role in the utilization of wood by chemosynthetic life and other deep-sea animals.

  6. How Deep-Sea Wood Falls Sustain Chemosynthetic Life

    Science.gov (United States)

    Bienhold, Christina; Pop Ristova, Petra; Wenzhöfer, Frank; Dittmar, Thorsten; Boetius, Antje

    2013-01-01

    Large organic food falls to the deep sea – such as whale carcasses and wood logs – are known to serve as stepping stones for the dispersal of highly adapted chemosynthetic organisms inhabiting hot vents and cold seeps. Here we investigated the biogeochemical and microbiological processes leading to the development of sulfidic niches by deploying wood colonization experiments at a depth of 1690 m in the Eastern Mediterranean for one year. Wood-boring bivalves of the genus Xylophaga played a key role in the degradation of the wood logs, facilitating the development of anoxic zones and anaerobic microbial processes such as sulfate reduction. Fauna and bacteria associated with the wood included types reported from other deep-sea habitats including chemosynthetic ecosystems, confirming the potential role of large organic food falls as biodiversity hot spots and stepping stones for vent and seep communities. Specific bacterial communities developed on and around the wood falls within one year and were distinct from freshly submerged wood and background sediments. These included sulfate-reducing and cellulolytic bacterial taxa, which are likely to play an important role in the utilization of wood by chemosynthetic life and other deep-sea animals. PMID:23301092

  7. Late Eocene impact events recorded in deep-sea sediments

    Science.gov (United States)

    Glass, B. P.

    1988-01-01

    Raup and Sepkoski proposed that mass extinctions have occurred every 26 Myr during the last 250 Myr. In order to explain this 26 Myr periodicity, it was proposed that the mass extinctions were caused by periodic increases in cometary impacts. One method to test this hypothesis is to determine if there were periodic increases in impact events (based on crater ages) that correlate with mass extinctions. A way to test the hypothesis that mass extinctions were caused by periodic increases in impact cratering is to look for evidence of impact events in deep-sea deposits. This method allows direct observation of the temporal relationship between impact events and extinctions as recorded in the sedimentary record. There is evidence in the deep-sea record for two (possibly three) impact events in the late Eocene. The younger event, represented by the North American microtektite layer, is not associated with an Ir anomaly. The older event, defined by the cpx spherule layer, is associated with an Ir anomaly. However, neither of the two impact events recorded in late Eocene deposits appears to be associated with an unusual number of extinctions. Thus there is little evidence in the deep-sea record for an impact-related mass extinction in the late Eocene.

  8. Research on the usage of a deep sea fast reactor

    Energy Technology Data Exchange (ETDEWEB)

    Otsubo, Akira; Kowata, Yasuki [Power Reactor and Nuclear Fuel Development Corp., Oarai, Ibaraki (Japan). Oarai Engineering Center

    1997-09-01

    Many new types of fast reactors have been studied in PNC. A deep sea fast reactor has the highest realization probability of the reactors studied because its development is desired by many specialists of oceanography, meteorology, deep sea bottom oil field, seismology and so on and because the development does not cost big budget and few technical problems remain to be solved. This report explains the outline and the usage of the reactor of 40 kWe and 200 to 400 kWe. The reactor can be used as a power source at an unmanned base for long term climate prediction and the earth science and an oil production base in a deep sea region. On the other hand, it is used for heat and electric power supply to a laboratory in the polar region. In future, it will be used in the space. At the present time, a large FBR development plan does not proceed successfully and a realization goal time of FBR has gone later and later. We think that it is the most important to develop the reactor as fast as possible and to plant a fast reactor technique in our present society. (author)

  9. Deep-sea disposal: Protecting fish and man

    International Nuclear Information System (INIS)

    Hagen, A.

    1988-01-01

    The definition of radioactive waste unsuitable for dumping at sea is based on the protection of man. See IAEA Safety Series No. 78. The development of criteria for assessing the impact on deep sea marine organisms at the population level has been attempted in a report recently published by the IAEA. See IAEA Technical Reports Series, No. 228 (1988). The report indicates that certain radionuclides may give rise to high dose rates to marine organisms if dumping is carried out with the assumptions of instantaneous release at the sea floor and dumping over long periods of time. In the report, a hypothetical dose rate to molluscs from zinc-65, which poses no significant harm to man, has the potential for giving high doses to bottom-dwelling molluscs

  10. Microbial ecology of deep-sea hypersaline anoxic basins

    KAUST Repository

    Merlino, Giuseppe

    2018-05-09

    Deep hypersaline anoxic basins (DHABs) are unique water bodies occurring within fractures at the bottom of the sea, where the dissolution of anciently buried evaporites created dense anoxic brines that are separated by a chemocline/pycnocline from the overlying oxygenated deep-seawater column. DHABs have been described in the Gulf of Mexico, the Mediterranean Sea, the Black Sea and the Red Sea. They are characterized by prolonged historical separation of the brines from the upper water column due to lack of mixing and by extreme conditions of salinity, anoxia, and relatively high hydrostatic pressure and temperatures. Due to these combined selection factors, unique microbial assemblages thrive in these polyextreme ecosystems. The topological localization of the different taxa in the brine-seawater transition zone coupled with the metabolic interactions and niche adaptations determine the metabolic functioning and biogeochemistry of DHABs. In particular, inherent metabolic strategies accompanied by genetic adaptations have provided insights on how prokaryotic communities can adapt to salt-saturated condition. Here, we review the current knowledge on the diversity, genomics, metabolisms and ecology of prokaryotes in DHABs.

  11. Deep-sea pennatulaceans (sea pens) - recent discoveries, morphological adaptations, and responses to benthic oceanographic parameters

    Science.gov (United States)

    Williams, G. C.

    2015-12-01

    Pennatulaceans are sessile, benthic marine organisms that are bathymetrically wide-ranging, from the intertidal to approximately 6300 m in depth, and are conspicuous constituents of deep-sea environments. The vast majority of species are adapted for anchoring in soft sediments by the cylindrical peduncle - a muscular hydrostatic skeleton. However, in the past decade a few species ("Rockpens") have been discovered and described that can attach to hard substratum such as exposed rocky outcrops at depths between 669 and 1969 m, by a plunger-like adaptation of the base of the peduncle. Of the thirty-six known genera, eleven (or 30%) have been recorded from depths greater than 1000 m. The pennatulacean depth record holders are an unidentified species of Umbellula from 6260 m in the Peru-Chile Trench and a recently-discovered and described genus and species, Porcupinella profunda, from 5300 m the Porcupine Abyssal Plain of the northeastern Atlantic. A morphologically-differentiated type of polyp (acrozooid) have recently been discovered and described in two genera of shallow-water coral reef sea pens. Acrozooids apparently represent asexual buds and presumably can detach from the adult to start clonal colonies through asexual budding. Acrozooids are to be expected in deep-sea pennatulaceans, but so far have not been observed below 24 m in depth. Morphological responses at depths greater than 1000 m in deep-sea pennatulaceas include: fewer polyps, larger polyps, elongated stalks, and clustering of polyps along the rachis. Responses to deep-ocean physical parameters and anthropogenic changes that could affect the abundance and distribution of deep-sea pennatulaceans include changes in bottom current flow and food availability, changes in seawater temperature and pH, habitat destruction by fish trawling, and sunken refuse pollution. No evidence of the effects of ocean acidification or other effects of anthropogenic climate change in sea pens of the deep-sea has been

  12. Sea-level and deep-sea-temperature variability over the past 5.3 million years.

    Science.gov (United States)

    Rohling, E J; Foster, G L; Grant, K M; Marino, G; Roberts, A P; Tamisiea, M E; Williams, F

    2014-04-24

    Ice volume (and hence sea level) and deep-sea temperature are key measures of global climate change. Sea level has been documented using several independent methods over the past 0.5 million years (Myr). Older periods, however, lack such independent validation; all existing records are related to deep-sea oxygen isotope (δ(18)O) data that are influenced by processes unrelated to sea level. For deep-sea temperature, only one continuous high-resolution (Mg/Ca-based) record exists, with related sea-level estimates, spanning the past 1.5 Myr. Here we present a novel sea-level reconstruction, with associated estimates of deep-sea temperature, which independently validates the previous 0-1.5 Myr reconstruction and extends it back to 5.3 Myr ago. We find that deep-sea temperature and sea level generally decreased through time, but distinctly out of synchrony, which is remarkable given the importance of ice-albedo feedbacks on the radiative forcing of climate. In particular, we observe a large temporal offset during the onset of Plio-Pleistocene ice ages, between a marked cooling step at 2.73 Myr ago and the first major glaciation at 2.15 Myr ago. Last, we tentatively infer that ice sheets may have grown largest during glacials with more modest reductions in deep-sea temperature.

  13. Identification of new deep sea sinuous channels in the eastern Arabian Sea.

    Science.gov (United States)

    Mishra, Ravi; Pandey, D K; Ramesh, Prerna; Clift, Peter D

    2016-01-01

    Deep sea channel systems are recognized in most submarine fans worldwide as well as in the geological record. The Indus Fan is the second largest modern submarine fan, having a well-developed active canyon and deep sea channel system. Previous studies from the upper Indus Fan have reported several active channel systems. In the present study, deep sea channel systems were identified within the middle Indus Fan using high resolution multibeam bathymetric data. Prominent morphological features within the survey block include the Raman Seamount and Laxmi Ridge. The origin of the newly discovered channels in the middle fan has been inferred using medium resolution satellite bathymetry data. Interpretation of new data shows that the highly sinuous deep sea channel systems also extend to the east of Laxmi Ridge, as well as to the west of Laxmi Ridge, as previously reported. A decrease in sinuosity southward can be attributed to the morphological constraints imposed by the elevated features. These findings have significance in determining the pathways for active sediment transport systems, as well as their source characterization. The geometry suggests a series of punctuated avulsion events leading to the present array of disconnected channels. Such channels have affected the Laxmi Basin since the Pliocene and are responsible for reworking older fan sediments, resulting in loss of the original erosional signature supplied from the river mouth. This implies that distal fan sediments have experienced significant signal shredding and may not represent the erosion and weathering conditions within the onshore basin at the time of sedimentation.

  14. Antifouling potentials of eight deep-sea-derived fungi from the South China Sea.

    Science.gov (United States)

    Zhang, Xiao-Yong; Xu, Xin-Ya; Peng, Jiang; Ma, Chun-Feng; Nong, Xu-Hua; Bao, Jie; Zhang, Guang-Zhao; Qi, Shu-Hua

    2014-04-01

    Marine-derived microbial secondary metabolites are promising potential sources of nontoxic antifouling agents. The search for environmentally friendly and low-toxic antifouling components guided us to investigate the antifouling potentials of eight novel fungal isolates from deep-sea sediments of the South China Sea. Sixteen crude ethyl acetate extracts of the eight fungal isolates showed distinct antibacterial activity against three marine bacteria (Loktanella hongkongensis UST950701-009, Micrococcus luteus UST950701-006 and Pseudoalteromonas piscida UST010620-005), or significant antilarval activity against larval settlement of bryozoan Bugula neritina. Furthermore, the extract of Aspergillus westerdijkiae DFFSCS013 displayed strong antifouling activity in a field trial lasting 4 months. By further bioassay-guided isolation, five antifouling alkaloids including brevianamide F, circumdatin F and L, notoamide C, and 5-chlorosclerotiamide were isolated from the extract of A. westerdijkiae DFFSCS013. This is the first report about the antifouling potentials of metabolites of the deep-sea-derived fungi from the South China Sea, and the first stage towards the development of non- or low-toxic antifouling agents from deep-sea-derived fungi.

  15. Observations of Deep-Sea Coral and Sponge Occurrences from the NOAA National Deep-Sea Coral and Sponge Database, 1842-Present (NCEI Accession 0145037)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NOAA’s Deep-Sea Coral Research and Technology Program (DSC-RTP) compiles a national database of the known locations of deep-sea corals and sponges in U.S....

  16. Global diversity and biogeography of deep-sea pelagic prokaryotes

    KAUST Repository

    Salazar, Guillem

    2015-08-07

    The deep-sea is the largest biome of the biosphere, and contains more than half of the whole ocean\\'s microbes. Uncovering their general patterns of diversity and community structure at a global scale remains a great challenge, as only fragmentary information of deep-sea microbial diversity exists based on regional-scale studies. Here we report the first globally comprehensive survey of the prokaryotic communities inhabiting the bathypelagic ocean using high-throughput sequencing of the 16S rRNA gene. This work identifies the dominant prokaryotes in the pelagic deep ocean and reveals that 50% of the operational taxonomic units (OTUs) belong to previously unknown prokaryotic taxa, most of which are rare and appear in just a few samples. We show that whereas the local richness of communities is comparable to that observed in previous regional studies, the global pool of prokaryotic taxa detected is modest (∼3600 OTUs), as a high proportion of OTUs are shared among samples. The water masses appear to act as clear drivers of the geographical distribution of both particle-attached and free-living prokaryotes. In addition, we show that the deep-oceanic basins in which the bathypelagic realm is divided contain different particle-attached (but not free-living) microbial communities. The combination of the aging of the water masses and a lack of complete dispersal are identified as the main drivers for this biogeographical pattern. All together, we identify the potential of the deep ocean as a reservoir of still unknown biological diversity with a higher degree of spatial complexity than hitherto considered.

  17. Global diversity and biogeography of deep-sea pelagic prokaryotes

    KAUST Repository

    Salazar, Guillem; Cornejo-Castillo, Francisco M.; Bení tez-Barrios, Veró nica; Fraile-Nuez, Eugenio; Á lvarez-Salgado, X. Antó n; Duarte, Carlos M.; Gasol, Josep M.; Acinas, Silvia G.

    2015-01-01

    The deep-sea is the largest biome of the biosphere, and contains more than half of the whole ocean's microbes. Uncovering their general patterns of diversity and community structure at a global scale remains a great challenge, as only fragmentary information of deep-sea microbial diversity exists based on regional-scale studies. Here we report the first globally comprehensive survey of the prokaryotic communities inhabiting the bathypelagic ocean using high-throughput sequencing of the 16S rRNA gene. This work identifies the dominant prokaryotes in the pelagic deep ocean and reveals that 50% of the operational taxonomic units (OTUs) belong to previously unknown prokaryotic taxa, most of which are rare and appear in just a few samples. We show that whereas the local richness of communities is comparable to that observed in previous regional studies, the global pool of prokaryotic taxa detected is modest (∼3600 OTUs), as a high proportion of OTUs are shared among samples. The water masses appear to act as clear drivers of the geographical distribution of both particle-attached and free-living prokaryotes. In addition, we show that the deep-oceanic basins in which the bathypelagic realm is divided contain different particle-attached (but not free-living) microbial communities. The combination of the aging of the water masses and a lack of complete dispersal are identified as the main drivers for this biogeographical pattern. All together, we identify the potential of the deep ocean as a reservoir of still unknown biological diversity with a higher degree of spatial complexity than hitherto considered.

  18. Age, growth rates, and paleoclimate studies of deep sea corals

    Science.gov (United States)

    Prouty, Nancy G; Roark, E. Brendan; Andrews, Allen; Robinson, Laura; Hill, Tessa; Sherwood, Owen; Williams, Branwen; Guilderson, Thomas P.; Fallon, Stewart

    2015-01-01

    Deep-water corals are some of the slowest growing, longest-lived skeletal accreting marine organisms. These habitat-forming species support diverse faunal assemblages that include commercially and ecologically important organisms. Therefore, effective management and conservation strategies for deep-sea corals can be informed by precise and accurate age, growth rate, and lifespan characteristics for proper assessment of vulnerability and recovery from perturbations. This is especially true for the small number of commercially valuable, and potentially endangered, species that are part of the black and precious coral fisheries (Tsounis et al. 2010). In addition to evaluating time scales of recovery from disturbance or exploitation, accurate age and growth estimates are essential for understanding the life history and ecology of these habitat-forming corals. Given that longevity is a key factor for population maintenance and fishery sustainability, partly due to limited and complex genetic flow among coral populations separated by great distances, accurate age structure for these deep-sea coral communities is essential for proper, long-term resource management.

  19. Deep sea mega-geomorphology: Progress and problems

    Science.gov (United States)

    Bryan, W. B.

    1985-01-01

    Historically, marine geologists have always worked with mega-scale morphology. This is a consequence both of the scale of the ocean basins and of the low resolution of the observational remote sensing tools available until very recently. In fact, studies of deep sea morphology have suffered from a serious gap in observational scale. Traditional wide-beam echo sounding gave images on a scale of miles, while deep sea photography has been limited to scales of a few tens of meters. Recent development of modern narrow-beam echo sounding coupled with computer-controlled swath mapping systems, and development of high-resolution deep-towed side-scan sonar, are rapidly filling in the scale gap. These technologies also can resolve morphologic detail on a scale of a few meters or less. As has also been true in planetary imaging projects, the ability to observe phenomena over a range of scales has proved very effective in both defining processes and in placing them in proper context.

  20. Deep-sea Lebensspuren of the Australian continental margins

    Science.gov (United States)

    Przeslawski, Rachel; Dundas, Kate; Radke, Lynda; Anderson, Tara J.

    Much of the deep sea comprises soft-sediment habitats dominated by comparatively low abundances of species-rich macrofauna and meiofauna. Although often not observed, these animals bioturbate the sediment during feeding and burrowing, leaving signs of their activities called Lebensspuren ('life traces'). In this study, we use still images to quantify Lebensspuren from the eastern (1921 images, 13 stations, 1300-2200 m depth) and western (1008 images, 11 stations, 1500-4400 m depth) Australian margins using a univariate measure of trace richness and a multivariate measure of Lebensspuren assemblages. A total of 46 Lebensspuren types were identified, including those matching named trace fossils and modern Lebensspuren found elsewhere in the world. Most traces could be associated with waste, crawling, dwellings, organism tests, feeding, or resting, but the origin of 15% of trace types remains unknown. Assemblages were significantly different between the two regions and depth profiles, with five Lebensspuren types accounting for over 95% of the differentiation (ovoid pinnate trace, crater row, spider trace, matchstick trace, mesh trace). Lebensspuren richness showed no strong relationships with depth, total organic carbon, or mud, although there was a positive correlation to chlorin index (i.e., organic freshness) in the eastern margin, with richness increasing with organic freshness. Lebensspuren richness was not related to epifauna either, indicating that epifauna may not be the primary source of Lebensspuren. Despite the abundance and distinctiveness of several traces both in the current and previous studies (e.g., ovoid pinnate, mesh, spider), their origin and distribution remains a mystery. We discuss this and several other considerations in the identification and quantification of Lebensspuren. This study represents the first comprehensive catalogue of deep-sea Lebensspuren in Australian waters and highlights the potential of Lebensspuren as valuable and often

  1. Radiocarbon Based Ages and Growth Rates: Hawaiian Deep Sea Corals

    Energy Technology Data Exchange (ETDEWEB)

    Roark, E B; Guilderson, T P; Dunbar, R B; Ingram, B L

    2006-01-13

    The radial growth rates and ages of three different groups of Hawaiian deep-sea 'corals' were determined using radiocarbon measurements. Specimens of Corallium secundum, Gerardia sp., and Leiopathes glaberrima, were collected from 450 {+-} 40 m at the Makapuu deep-sea coral bed using a submersible (PISCES V). Specimens of Antipathes dichotoma were collected at 50 m off Lahaina, Maui. The primary source of carbon to the calcitic C. secundum skeleton is in situ dissolved inorganic carbon (DIC). Using bomb {sup 14}C time markers we calculate radial growth rates of {approx} 170 {micro}m y{sup -1} and ages of 68-75 years on specimens as tall as 28 cm of C. secundum. Gerardia sp., A. dichotoma, and L. glaberrima have proteinaceous skeletons and labile particulate organic carbon (POC) is their primary source of architectural carbon. Using {sup 14}C we calculate a radial growth rate of 15 {micro}m y{sup -1} and an age of 807 {+-} 30 years for a live collected Gerardia sp., showing that these organisms are extremely long lived. Inner and outer {sup 14}C measurements on four sub-fossil Gerardia spp. samples produce similar growth rate estimates (range 14-45 {micro}m y{sup -1}) and ages (range 450-2742 years) as observed for the live collected sample. Similarly, with a growth rate of < 10 {micro}m y{sup -1} and an age of {approx}2377 years, L. glaberrima at the Makapuu coral bed, is also extremely long lived. In contrast, the shallow-collected A. dichotoma samples yield growth rates ranging from 130 to 1,140 {micro}m y{sup -1}. These results show that Hawaiian deep-sea corals grow more slowly and are older than previously thought.

  2. Deep-sea benthic footprint of the deepwater horizon blowout.

    Directory of Open Access Journals (Sweden)

    Paul A Montagna

    Full Text Available The Deepwater Horizon (DWH accident in the northern Gulf of Mexico occurred on April 20, 2010 at a water depth of 1525 meters, and a deep-sea plume was detected within one month. Oil contacted and persisted in parts of the bottom of the deep-sea in the Gulf of Mexico. As part of the response to the accident, monitoring cruises were deployed in fall 2010 to measure potential impacts on the two main soft-bottom benthic invertebrate groups: macrofauna and meiofauna. Sediment was collected using a multicorer so that samples for chemical, physical and biological analyses could be taken simultaneously and analyzed using multivariate methods. The footprint of the oil spill was identified by creating a new variable with principal components analysis where the first factor was indicative of the oil spill impacts and this new variable mapped in a geographic information system to identify the area of the oil spill footprint. The most severe relative reduction of faunal abundance and diversity extended to 3 km from the wellhead in all directions covering an area about 24 km(2. Moderate impacts were observed up to 17 km towards the southwest and 8.5 km towards the northeast of the wellhead, covering an area 148 km(2. Benthic effects were correlated to total petroleum hydrocarbon, polycyclic aromatic hydrocarbons and barium concentrations, and distance to the wellhead; but not distance to hydrocarbon seeps. Thus, benthic effects are more likely due to the oil spill, and not natural hydrocarbon seepage. Recovery rates in the deep sea are likely to be slow, on the order of decades or longer.

  3. Deep sea AUV navigation using multiple acoustic beacons

    Science.gov (United States)

    Ji, Da-xiong; Song, Wei; Zhao, Hong-yu; Liu, Jian

    2016-04-01

    Navigation is a critical requirement for the operation of Autonomous Underwater Vehicles (AUVs). To estimate the vehicle position, we present an algorithm using an extended Kalman filter (EKF) to integrate dead-reckoning position with acoustic ranges from multiple beacons pre-deployed in the operating environment. Owing to high latency, variable sound speed multipath transmissions and unreliability in acoustic measurements, outlier recognition techniques are proposed as well. The navigation algorithm has been tested by the recorded data of deep sea AUV during field operations in a variety of environments. Our results show the improved performance over prior techniques based on position computation.

  4. Transcriptomes and expression profiling of deep-sea corals from the Red Sea provide insight into the biology of azooxanthellate corals

    OpenAIRE

    Yum, L. K.; Baumgarten, S.; Röthig, T.; Roder, C.; Roik, Anna; Michell, C.; Voolstra, C. R.

    2017-01-01

    Despite the importance of deep-sea corals, our current understanding of their ecology and evolution is limited due to difficulties in sampling and studying deep-sea environments. Moreover, a recent re-evaluation of habitat limitations has been suggested after characterization of deep-sea corals in the Red Sea, where they live at temperatures of above 20??C at low oxygen concentrations. To gain further insight into the biology of deep-sea corals, we produced reference transcriptomes and studie...

  5. Turbidites and Benthic Faunal Succession in the Deep Sea: An Ecological Paradox

    National Research Council Canada - National Science Library

    Young, David

    2001-01-01

    Characteristics of benthic faunal succession following turbidity flows in the deep sea will vary according to the composition of turbidite materials, the spatial scales of deposition, the structure...

  6. Global ocean conveyor lowers extinction risk in the deep sea

    Science.gov (United States)

    Henry, Lea-Anne; Frank, Norbert; Hebbeln, Dierk; Wienberg, Claudia; Robinson, Laura; van de Flierdt, Tina; Dahl, Mikael; Douarin, Mélanie; Morrison, Cheryl L.; López Correa, Matthias; Rogers, Alex D.; Ruckelshausen, Mario; Roberts, J. Murray

    2014-06-01

    General paradigms of species extinction risk are urgently needed as global habitat loss and rapid climate change threaten Earth with what could be its sixth mass extinction. Using the stony coral Lophelia pertusa as a model organism with the potential for wide larval dispersal, we investigated how the global ocean conveyor drove an unprecedented post-glacial range expansion in Earth's largest biome, the deep sea. We compiled a unique ocean-scale dataset of published radiocarbon and uranium-series dates of fossil corals, the sedimentary protactinium-thorium record of Atlantic meridional overturning circulation (AMOC) strength, authigenic neodymium and lead isotopic ratios of circulation pathways, and coral biogeography, and integrated new Bayesian estimates of historic gene flow. Our compilation shows how the export of Southern Ocean and Mediterranean waters after the Younger Dryas 11.6 kyr ago simultaneously triggered two dispersal events in the western and eastern Atlantic respectively. Each pathway injected larvae from refugia into ocean currents powered by a re-invigorated AMOC that led to the fastest postglacial range expansion ever recorded, covering 7500 km in under 400 years. In addition to its role in modulating global climate, our study illuminates how the ocean conveyor creates broad geographic ranges that lower extinction risk in the deep sea.

  7. Magnetically tunable oil droplet lens of deep-sea shrimp

    Science.gov (United States)

    Iwasaka, M.; Hirota, N.; Oba, Y.

    2018-05-01

    In this study, the tunable properties of a bio-lens from a deep-sea shrimp were investigated for the first time using magnetic fields. The skin of the shrimp exhibited a brilliantly colored reflection of incident white light. The light reflecting parts and the oil droplets in the shrimp's skin were observed in a glass slide sample cell using a digital microscope that operated in the bore of two superconducting magnets (maximum strengths of 5 and 13 T). In the ventral skin of the shrimp, which contained many oil droplets, some comparatively large oil droplets (50 to 150 μm in diameter) were present. A distinct response to magnetic fields was found in these large oil droplets. Further, the application of the magnetic fields to the sample cell caused a change in the size of the oil droplets. The phenomena observed in this work indicate that the oil droplets of deep sea shrimp can act as lenses in which the optical focusing can be modified via the application of external magnetic fields. The results of this study will make it possible to fabricate bio-inspired soft optical devices in future.

  8. Activity syndromes and metabolism in giant deep-sea isopods

    Science.gov (United States)

    Wilson, Alexander D. M.; Szekeres, Petra; Violich, Mackellar; Gutowsky, Lee F. G.; Eliason, Erika J.; Cooke, Steven J.

    2017-03-01

    Despite growing interest, the behavioural ecology of deep-sea organisms is largely unknown. Much of this scarcity in knowledge can be attributed to deepwater animals being secretive or comparatively 'rare', as well as technical difficulties associated with accessing such remote habitats. Here we tested whether two species of giant marine isopod (Bathynomus giganteus, Booralana tricarinata) captured from 653 to 875 m in the Caribbean Sea near Eleuthera, The Bahamas, exhibited an activity behavioural syndrome across two environmental contexts (presence/absence of food stimulus) and further whether this syndrome carried over consistently between sexes. We also measured routine metabolic rate and oxygen consumption in response to a food stimulus in B. giganteus to assess whether these variables are related to individual differences in personality. We found that both species show an activity syndrome across environmental contexts, but the underlying mechanistic basis of this syndrome, particularly in B. giganteus, is unclear. Contrary to our initial predictions, neither B. giganteus nor B. tricarinata showed any differences between mean expression of behavioural traits between sexes. Both sexes of B. tricarinata showed strong evidence of an activity syndrome underlying movement and foraging ecology, whereas only male B. giganteus showed evidence of an activity syndrome. Generally, individuals that were more active and bolder, in a standard open arena test were also more active when a food stimulus was present. Interestingly, individual differences in metabolism were not related to individual differences in behaviour based on present data. Our study provides the first measurements of behavioural syndromes and metabolism in giant deep-sea isopods.

  9. Ubiquitous healthy diatoms in the deep sea confirm deep carbon injection by the biological pump

    KAUST Repository

    Agusti, Susana

    2015-07-09

    The role of the ocean as a sink for CO2 is partially dependent on the downward transport of phytoplankton cells packaged within fast-sinking particles. However, whether such fast-sinking mechanisms deliver fresh organic carbon down to the deep bathypelagic sea and whether this mechanism is prevalent across the ocean requires confirmation. Here we report the ubiquitous presence of healthy photosynthetic cells, dominated by diatoms, down to 4,000 m in the deep dark ocean. Decay experiments with surface phytoplankton suggested that the large proportion (18%) of healthy photosynthetic cells observed, on average, in the dark ocean, requires transport times from a few days to a few weeks, corresponding to sinking rates (124–732 m d−1) comparable to those of fast-sinking aggregates and faecal pellets. These results confirm the expectation that fast-sinking mechanisms inject fresh organic carbon into the deep sea and that this is a prevalent process operating across the global oligotrophic ocean.

  10. Ubiquitous healthy diatoms in the deep sea confirm deep carbon injection by the biological pump

    KAUST Repository

    Agusti, Susana; Gonzá lez-Gordillo, J. I.; Vaqué , D.; Estrada, M.; Cerezo, M. I.; Salazar, G.; Gasol, J. M.; Duarte, Carlos M.

    2015-01-01

    The role of the ocean as a sink for CO2 is partially dependent on the downward transport of phytoplankton cells packaged within fast-sinking particles. However, whether such fast-sinking mechanisms deliver fresh organic carbon down to the deep bathypelagic sea and whether this mechanism is prevalent across the ocean requires confirmation. Here we report the ubiquitous presence of healthy photosynthetic cells, dominated by diatoms, down to 4,000 m in the deep dark ocean. Decay experiments with surface phytoplankton suggested that the large proportion (18%) of healthy photosynthetic cells observed, on average, in the dark ocean, requires transport times from a few days to a few weeks, corresponding to sinking rates (124–732 m d−1) comparable to those of fast-sinking aggregates and faecal pellets. These results confirm the expectation that fast-sinking mechanisms inject fresh organic carbon into the deep sea and that this is a prevalent process operating across the global oligotrophic ocean.

  11. The Age of Human-Robot Collaboration: Deep Sea Exploration

    KAUST Repository

    Khatib, Oussama

    2018-01-18

    The promise of oceanic discovery has intrigued scientists and explorers for centuries, whether to study underwater ecology and climate change, or to uncover natural resources and historic secrets buried deep at archaeological sites. Reaching these depth is imperative since factors such as pollution and deep-sea trawling increasingly threaten ecology and archaeological sites. These needs demand a system deploying human-level expertise at the depths, and yet remotely operated vehicles (ROVs) are inadequate for the task. To meet the challenge of dexterous operation at oceanic depths, in collaboration with KAUSTメs Red Sea Research Center and MEKA Robotics, Oussama Khatib and the team developed Ocean One, a bimanual humanoid robot that brings immediate and intuitive haptic interaction to oceanic environments. Introducing Ocean One, the haptic robotic avatar During this lecture, Oussama Khatib will talk about how teaming with the French Ministry of Cultureメs Underwater Archaeology Research Department, they deployed Ocean One in an expedition in the Mediterranean to Louis XIVメs flagship Lune, lying off the coast of Toulon at ninety-one meters. In the spring of 2016, Ocean One became the first robotic avatar to embody a humanメs presence at the seabed. Ocean Oneメs journey in the Mediterranean marks a new level of marine exploration: Much as past technological innovations have impacted society, Ocean Oneメs ability to distance humans physically from dangerous and unreachable work spaces while connecting their skills, intuition, and experience to the task promises to fundamentally alter remote work. Robotic avatars will search for and acquire materials, support equipment, build infrastructure, and perform disaster prevention and recovery operations - be it deep in oceans and mines, at mountain tops, or in space.

  12. Installation of deep water sub-sea equipment

    Energy Technology Data Exchange (ETDEWEB)

    Pollack, Jack; Demian, Nabil [SBM-IMODCO Inc., Houston, TX (UNited States)

    2004-07-01

    Offshore oil developments are being planned in water depths exceeding 2000 m. Lowering and positioning large, heavy sub sea hardware, using conventional methods, presents new technical challenges in these ultra deep waters. In 3000 m a safe lift using conventional steel cables will require more capacity to support the cable self weight than the static payload. Adding dynamic loads caused by the motions of the surface vessel can quickly cause the safe capacity of the wire to be exceeded. Synthetic ropes now exist to greatly reduce the lowering line weight. The lower stiffness of these synthetic ropes aggravate the dynamic line tensions due to vessel motions and relatively little is known about the interaction of these ropes on the winches and sheaves required for pay-out and haul-in of these lines under dynamic load. Usage of conventional winches would damage the synthetic rope and risk the hardware being deployed. Reliable and economic installation systems that can operate from existing installation vessels are considered vital for ultra deep-water oil development. The paper describes a Deep Water Sub-Sea Hardware Deployment system consisting of a buoy with variable, pressure-balanced buoyancy, which is used to offset most of the payload weight as it is lowered. The buoyant capacity is controlled by air pumped into the tank from the surface vessel through a reinforced hose. The buoy and payload motion are isolated from the deployment line surface dynamics using a simple passive heave compensator mounted between the buoy and the bottom of the deployment rope. The system components, functionality and dynamic behavior are presented in the paper. (author)

  13. 75 FR 49420 - Fisheries of the Northeastern United States; Atlantic Deep-Sea Red Crab Fisheries; 2010 Atlantic...

    Science.gov (United States)

    2010-08-13

    .... 100513223-0289-02] RIN 0648-AY88 Fisheries of the Northeastern United States; Atlantic Deep-Sea Red Crab Fisheries; 2010 Atlantic Deep-Sea Red Crab Specifications In- season Adjustment AGENCY: National Marine...-sea (DAS) allocation for the Atlantic deep- sea red crab fishery that were implemented in May 2010...

  14. 75 FR 35435 - Fisheries of the Northeastern United States; Atlantic Deep-Sea Red Crab Fisheries; 2010 Atlantic...

    Science.gov (United States)

    2010-06-22

    .... 100513223-0254-01] RIN 0648-AY88 Fisheries of the Northeastern United States; Atlantic Deep-Sea Red Crab Fisheries; 2010 Atlantic Deep-Sea Red Crab Specifications In- season Adjustment AGENCY: National Marine... deep-sea red crab fishery, including a target total allowable catch (TAC) and a fleet-wide days-at-sea...

  15. Stronger at Depth: Jamming Grippers as Deep Sea Sampling Tools.

    Science.gov (United States)

    Licht, Stephen; Collins, Everett; Mendes, Manuel Lopes; Baxter, Christopher

    2017-12-01

    In this work we experimentally demonstrate (a) that the holding strength of universal jamming grippers increases as a function of the jamming pressure to greater than three atmospheres, and (b) that jamming grippers can be operated in the deep sea in ambient pressures exceeding one hundred atmospheres, where such high jamming pressures can be readily achieved. Laboratory experiments in a pressurized, water-filled test cell are used to measure the holding force of a "universal" style jamming gripper as a function of the pressure difference between internal membrane pressure and ambient pressure. Experiments at sea are used to demonstrate that jamming grippers can be installed on, and operated from, remotely operated vehicles at depths in excess of 1200 m. In both experiments, the jamming gripper consists of a latex balloon filled with a mixture of fresh water and ∼200 μm glass beads, which are cheaply available in large quantities as sand blasting media. The use of a liquid, rather than a gas, as the fluid media allows operation of the gripper with a closed-loop fluid system; jamming pressure is controlled with an electrically driven water hydraulic cylinder in the laboratory and with an oil hydraulic-driven large-bore water hydraulic cylinder at sea.

  16. Microbiology of the Red Sea (and other) deep-sea anoxic brine lakes

    KAUST Repository

    Antunes, Andre

    2011-05-30

    Summary: The Red Sea harbours approximately 25 deep-sea anoxic brine pools. They constitute extremely unique and complex habitats with the conjugation of several extreme physicochemical parameters rendering them some of the most inhospitable environments on Earth. After 50 years of research mostly driven by chemists, geophysicists and geologists, the microbiology of the brines has been receiving increased interest in the last decade. Recent molecular and cultivation-based studies have provided us with a first glimpse on the enormous biodiversity of the local microbial communities, the identification of several new taxonomic groups, and the isolation of novel extremophiles that thrive in these environments. This review presents a general overview of these unusual biotopes and compares them with other similar environments in the Mediterranean Sea and the Gulf of Mexico, with a focus on their microbial ecology. © 2011 Society for Applied Microbiology and Blackwell Publishing Ltd.

  17. Characterization of bacterial diversity associated with deep sea ferromanganese nodules from the South China Sea.

    Science.gov (United States)

    Zhang, De-Chao; Liu, Yan-Xia; Li, Xin-Zheng

    2015-09-01

    Deep sea ferromanganese (FeMn) nodules contain metallic mineral resources and have great economic potential. In this study, a combination of culture-dependent and culture-independent (16S rRNA genes clone library and pyrosequencing) methods was used to investigate the bacterial diversity in FeMn nodules from Jiaolong Seamount, the South China Sea. Eleven bacterial strains including some moderate thermophiles were isolated. The majority of strains belonged to the phylum Proteobacteria; one isolate belonged to the phylum Firmicutes. A total of 259 near full-length bacterial 16S rRNA gene sequences in a clone library and 67,079 valid reads obtained using pyrosequencing indicated that members of the Gammaproteobacteria dominated, with the most abundant bacterial genera being Pseudomonas and Alteromonas. Sequence analysis indicated the presence of many organisms whose closest relatives are known manganese oxidizers, iron reducers, hydrogen-oxidizing bacteria and methylotrophs. This is the first reported investigation of bacterial diversity associated with deep sea FeMn nodules from the South China Sea.

  18. Deep Sea Coral voucher sequence dataset - Identification of deep-sea corals collected during the 2009 - 2014 West Coast Groundfish Bottom Trawl Survey

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Data for this project resides in the West Coast Groundfish Bottom Trawl Survey Database. Deep-sea corals are often components of trawling bycatch, though their...

  19. NOAA National Deep-Sea Coral and Sponge Database 1842-Present

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NOAA's Deep-Sea Coral Research and Technology Program (DSC-RTP) is compiling a national geodatabase of the known locations of deep-sea corals and sponges in U.S....

  20. An oceanographic model for the dispersion of wastes disposed of in the deep sea

    International Nuclear Information System (INIS)

    1986-01-01

    This report reviews the present knowledge of oceanic processes by which substances might be transferred from a deep-sea dump site back to man or his food chain and recommends pragmatic ways to calculate such transfers in order that deep-sea dumping of contaminants may be regulated effectively. The recommendations as to the currently most appropriate models are given

  1. An interactive end-user software application for a deep-sea photographic database

    Digital Repository Service at National Institute of Oceanography (India)

    Jaisankar, S.; Sharma, R.

    . The software is the first of its kind in deep-sea applications and it also attempts to educate the user about deep-sea photography. The application software is developed by modifying established routines and by creating new routines to save the retrieved...

  2. Dynamics of a deep-sea cable system

    International Nuclear Information System (INIS)

    Gulyaev, V.I.; Koshkin, V.L.; Serpak, I.O.

    1995-01-01

    We consider the problem of the dynamics of a deep-sea cable system consisting of branches of constant and variable length, interacting with an undercurrent which is variable in depth and direction. We construct a mathematical model for the motion of the element of the cable system. The cables are modeled as inextensible, flexible filaments of variable length. For numerical realization of the problem, we suggest special regularizing transformations of the variables, making it possible (without additional simplifications) to take into account all the characteristic features of the motion of the filaments and to avoid difficulties in the integration of the equations of motion connected with the variability of the length of the branches of the cable system. The proposed mathematical model and the technique for its numerical analysis is applicable for the investigation of the dynamics of a complex for mining minerals from the ocean floor

  3. Potential Health Benefits of Deep Sea Water: A Review

    Directory of Open Access Journals (Sweden)

    Samihah Zura Mohd Nani

    2016-01-01

    Full Text Available Deep sea water (DSW commonly refers to a body of seawater that is pumped up from a depth of over 200 m. It is usually associated with the following characteristics: low temperature, high purity, and being rich with nutrients, namely, beneficial elements, which include magnesium, calcium, potassium, chromium, selenium, zinc, and vanadium. Less photosynthesis of plant planktons, consumption of nutrients, and organic decomposition have caused lots of nutrients to remain there. Due to this, DSW has potential to become a good source for health. Research has proven that DSW can help overcome health problems especially related to lifestyle-associated diseases such as cardiovascular disease, diabetes, obesity, cancer, and skin problems. This paper reviews the potential health benefits of DSW by referring to the findings from previous researches.

  4. Consolidation properties and stress history of some deep sea sediments

    International Nuclear Information System (INIS)

    Silva, A.J.; Jordan, S.A.

    1983-09-01

    This paper summarizes results of 180 consolidation tests on samples from 52 cores taken with a variety of samplers in deep sea regimes of the North Western Atlantic and North Central Pacific. Most of the samplers were of large cross sectional area (over 10-cm dia) and attention was given to improving field techniques and reducing structural disturbance to the sediments. Good quality samples have been recovered to depths in excess of 25 m in several locations. The sediments were primarily fine-grained clays and silty clays with the predominant clay mineral being illite; however, the presence of smectite and calcium carbonate in some samples had significant influence on the properties. 34 references, 11 figures, 2 tables

  5. Transcriptomes and expression profiling of deep-sea corals from the Red Sea provide insight into the biology of azooxanthellate corals

    KAUST Repository

    Yum, Lauren

    2017-07-19

    Despite the importance of deep-sea corals, our current understanding of their ecology and evolution is limited due to difficulties in sampling and studying deep-sea environments. Moreover, a recent re-evaluation of habitat limitations has been suggested after characterization of deep-sea corals in the Red Sea, where they live at temperatures of above 20 °C at low oxygen concentrations. To gain further insight into the biology of deep-sea corals, we produced reference transcriptomes and studied gene expression of three deep-sea coral species from the Red Sea, i.e. Dendrophyllia sp., Eguchipsammia fistula, and Rhizotrochus typus. Our analyses suggest that deep-sea coral employ mitochondrial hypometabolism and anaerobic glycolysis to manage low oxygen conditions present in the Red Sea. Notably, we found expression of genes related to surface cilia motion that presumably enhance small particle transport rates in the oligotrophic deep-sea environment. This is the first study to characterize transcriptomes and in situ gene expression for deep-sea corals. Our work offers several mechanisms by which deep-sea corals might cope with the distinct environmental conditions present in the Red Sea As such, our data provide direction for future research and further insight to organismal response of deep-sea coral to environmental change and ocean warming.

  6. Transcriptomes and expression profiling of deep-sea corals from the Red Sea provide insight into the biology of azooxanthellate corals.

    Science.gov (United States)

    Yum, Lauren K; Baumgarten, Sebastian; Röthig, Till; Roder, Cornelia; Roik, Anna; Michell, Craig; Voolstra, Christian R

    2017-07-25

    Despite the importance of deep-sea corals, our current understanding of their ecology and evolution is limited due to difficulties in sampling and studying deep-sea environments. Moreover, a recent re-evaluation of habitat limitations has been suggested after characterization of deep-sea corals in the Red Sea, where they live at temperatures of above 20 °C at low oxygen concentrations. To gain further insight into the biology of deep-sea corals, we produced reference transcriptomes and studied gene expression of three deep-sea coral species from the Red Sea, i.e. Dendrophyllia sp., Eguchipsammia fistula, and Rhizotrochus typus. Our analyses suggest that deep-sea coral employ mitochondrial hypometabolism and anaerobic glycolysis to manage low oxygen conditions present in the Red Sea. Notably, we found expression of genes related to surface cilia motion that presumably enhance small particle transport rates in the oligotrophic deep-sea environment. This is the first study to characterize transcriptomes and in situ gene expression for deep-sea corals. Our work offers several mechanisms by which deep-sea corals might cope with the distinct environmental conditions present in the Red Sea As such, our data provide direction for future research and further insight to organismal response of deep-sea coral to environmental change and ocean warming.

  7. Transcriptomes and expression profiling of deep-sea corals from the Red Sea provide insight into the biology of azooxanthellate corals

    KAUST Repository

    Yum, Lauren; Baumgarten, Sebastian; Rö thig, Till; Roder, Cornelia; Roik, Anna Krystyna; Michell, Craig; Voolstra, Christian R.

    2017-01-01

    Despite the importance of deep-sea corals, our current understanding of their ecology and evolution is limited due to difficulties in sampling and studying deep-sea environments. Moreover, a recent re-evaluation of habitat limitations has been suggested after characterization of deep-sea corals in the Red Sea, where they live at temperatures of above 20 °C at low oxygen concentrations. To gain further insight into the biology of deep-sea corals, we produced reference transcriptomes and studied gene expression of three deep-sea coral species from the Red Sea, i.e. Dendrophyllia sp., Eguchipsammia fistula, and Rhizotrochus typus. Our analyses suggest that deep-sea coral employ mitochondrial hypometabolism and anaerobic glycolysis to manage low oxygen conditions present in the Red Sea. Notably, we found expression of genes related to surface cilia motion that presumably enhance small particle transport rates in the oligotrophic deep-sea environment. This is the first study to characterize transcriptomes and in situ gene expression for deep-sea corals. Our work offers several mechanisms by which deep-sea corals might cope with the distinct environmental conditions present in the Red Sea As such, our data provide direction for future research and further insight to organismal response of deep-sea coral to environmental change and ocean warming.

  8. Nematode assemblages in the deep-sea benthos of the Norwegian Sea

    Science.gov (United States)

    Jensen, Preben

    1988-07-01

    The deep-sea benthos of the Norwegian Sea contains 20-204 nematodes per 10 cm 2 down to 3 cm depth at seven stations sampled between 970 and 3294 m water depth. The majority of nematodes occur in the uppermost cm. Biomass varies from 3 to 73 μg C per 10 cm 2. Individual adult weight of the most dominant species differs by a factor of almost 1000, i.e. from 3-4 ng C to 3400 ng C; however, the majority of the nematodes is small-sized. Species diversity and evenness are high at all stations and each station harbours its specific fauna with little overlap between stations. Analysis of trophic group composition suggests that microbial feeding types (deposit and epistrate feeders) prevail in the deep-sea benthos; predators and scavengers are scarce. It is concluded that the nematode assemblage at each station consists of a mosaic of many microhabitats. The small nematode body weight probably results from limited food supply and/or poor food quality.

  9. Chronicles of the deep : ageing deep-sea corals in New Zealand waters

    International Nuclear Information System (INIS)

    Tracey, D.; Neil, H.; Gordon, D.; O'Shea, S.

    2003-01-01

    How old is a coral? Finding the answer requires some rather complex steps. We need to understand: the source of carbonate; the effects of climatic events; how to interpret growth zones; the effect of 14 C and biological processes such as feeding and reproduction; and how to overcome the lack of deep-sea environmental data records. We also need to find out where on the coral we should be sampling to get the best estimates of age. At the moment we know little about how deep-sea corals deposit their calcite, but we will be exploring this further so that we can have greater confidence in our age estimates. To confirm and validate age and growth, it will be necessary to use a combination of some of the the possible methods for ageing coral. In addition to ageing the corals, this work should yield a high-resolution record of ocean temperature during the past 100 years by using stable-isotope signatures preserved in the corals' carbonate skeletons. (author). 4 figs

  10. Deep silicon maxima in the stratified oligotrophic Mediterranean Sea

    Directory of Open Access Journals (Sweden)

    Y. Crombet

    2011-02-01

    Full Text Available The silicon biogeochemical cycle has been studied in the Mediterranean Sea during late summer/early autumn 1999 and summer 2008. The distribution of nutrients, particulate carbon and silicon, fucoxanthin (Fuco, and total chlorophyll-a (TChl-a were investigated along an eastward gradient of oligotrophy during two cruises (PROSOPE and BOUM encompassing the entire Mediterranean Sea during the stratified period. At both seasons, surface waters were depleted in nutrients and the nutriclines gradually deepened towards the East, the phosphacline being the deepest in the easternmost Levantine basin. Following the nutriclines, parallel deep maxima of biogenic silica (DSM, fucoxanthin (DFM and TChl-a (DCM were evidenced during both seasons with maximal concentrations of 0.45 μmol L−1 for BSi, 0.26 μg L−1 for Fuco, and 1.70 μg L−1 for TChl-a, all measured during summer. Contrary to the DCM which was a persistent feature in the Mediterranean Sea, the DSM and DFMs were observed in discrete areas of the Alboran Sea, the Algero-Provencal basin, the Ionian sea and the Levantine basin, indicating that diatoms were able to grow at depth and dominate the DCM under specific conditions. Diatom assemblages were dominated by Chaetoceros spp., Leptocylindrus spp., Pseudonitzschia spp. and the association between large centric diatoms (Hemiaulus hauckii and Rhizosolenia styliformis and the cyanobacterium Richelia intracellularis was observed at nearly all sites. The diatom's ability to grow at depth is commonly observed in other oligotrophic regions and could play a major role in ecosystem productivity and carbon export to depth. Contrary to the common view that Si and siliceous phytoplankton are not major components of the Mediterranean biogeochemistry, we suggest here that diatoms, by persisting at depth during the stratified period, could contribute to a

  11. Virtual Investigations of an Active Deep Sea Volcano

    Science.gov (United States)

    Sautter, L.; Taylor, M. M.; Fundis, A.; Kelley, D. S.; Elend, M.

    2013-12-01

    Axial Seamount, located on the Juan de Fuca spreading ridge 300 miles off the Oregon coast, is an active volcano whose summit caldera lies 1500 m beneath the sea surface. Ongoing construction of the Regional Scale Nodes (RSN) cabled observatory by the University of Washington (funded by the NSF Ocean Observatories Initiative) has allowed for exploration of recent lava flows and active hydrothermal vents using HD video mounted on the ROVs, ROPOS and JASON II. College level oceanography/marine geology online laboratory exercises referred to as Online Concept Modules (OCMs) have been created using video and video frame-captured mosaics to promote skill development for characterizing and quantifying deep sea environments. Students proceed at their own pace through a sequence of short movies with which they (a) gain background knowledge, (b) learn skills to identify and classify features or biota within a targeted environment, (c) practice these skills, and (d) use their knowledge and skills to make interpretations regarding the environment. Part (d) serves as the necessary assessment component of the laboratory exercise. Two Axial Seamount-focused OCMs will be presented: 1) Lava Flow Characterization: Identifying a Suitable Cable Route, and 2) Assessing Hydrothermal Vent Communities: Comparisons Among Multiple Sulfide Chimneys.

  12. ASSESSMENT OF THE DEEP SEA WRECK USS INDEPENDENCE

    Directory of Open Access Journals (Sweden)

    Lisa C. Symons

    2016-07-01

    Full Text Available As part of ongoing efforts to better understand the nature of shipwrecks in National Marine Sanctuaries which may pose some level of pollution risk, and in this case, to definitively locate what is likely the only shipwreck in a sanctuary involved in both nuclear testing and nuclear waste disposal, NOAA’s Office of National Marine Sanctuaries collaborated with NOAA’s Office of Ocean Exploration and The Boeing Company, which provided their autonomous underwater vehicle, Echo Ranger, to conduct the first deep-water archaeological survey of the scuttled aircraft carrier USS Independence in the waters of Monterey Bay National Marine Sanctuary (MBNMS in March 2015. The presence of the deep-sea scuttled radioactive aircraft carrier USS Independence off the California coast has been the source of consistent media speculation and public concern for decades. The survey confirmed that a sonar target charted at the location was Independence, and provided details on the condition of the wreck, and revealed no detectable levels of radioactivity. At the same time, new information from declassified government reports provided more detail on Independence’s use as a naval test craft for radiological decontamination as well as its use as a repository for radioactive materials at the time of its scuttling in 1951. While further surveys may reveal more, physical assessment and focused archival work has demonstrated that the level of concern and speculation of danger from either a radioactive or oil pollution threat posed may be exaggerated.

  13. Biogenic Properties of Deep Waters from the Black Sea Reduction (Hydrogen Sulphide) Zone for Marine Algae

    OpenAIRE

    Polikarpov, Gennady G.; Lazorenko, Galina Е.; Тereschenko, Natalya N.

    2015-01-01

    Abstract Generalized data of biogenic properties investigations of the Black Sea deep waters from its reduction zone for marine algae are presented. It is shown on board and in laboratory that after pre-oxidation of hydrogen sulphide by intensive aeration of the deep waters lifted to the surface of the sea, they are ready to be used for cultivation of the Black Sea unicellular, planktonic, and multicellular, benthic, algae instead of artificial medium. Naturally balanced micro- and macroeleme...

  14. Deep-sea environment and biodiversity of the West African Equatorial margin

    OpenAIRE

    Sibuet, Myriam; Vangriesheim, Annick

    2009-01-01

    The long-term BIOZAIRE multidisciplinary deep-sea environmental program on the West Equatorial African margin organized in partnership between Ifremer and TOTAL aimed at characterizing the benthic community structure in relation with physical and chemical processes in a region of oil and gas interest. The morphology of the deep Congo submarine channel and the sedimentological structures of the deep-sea fan were established during the geological ZAIANGO project and helped to select study sites...

  15. Starvation and recovery in the deep-sea methanotroph Methyloprofundus sedimenti

    OpenAIRE

    Tavormina, Patricia L.; Kellermann, Matthias Y.; Antony, Chakkiath Paul; Tocheva, Elitza I.; Dalleska, Nathan F.; Jensen, Ashley J.; Valentine, David L.; Hinrichs, Kai-Uwe; Jensen, Grant J.; Dubilier, Nicole; Orphan, Victoria J.

    2017-01-01

    In the deep ocean, the conversion of methane into derived carbon and energy drives the establishment of diverse faunal communities. Yet specific biological mechanisms underlying the introduction of methane-derived carbon into the food web remain poorly described, due to a lack of cultured representative deep-sea methanotrophic prokaryotes. Here, the response of the deep-sea aerobic methanotroph Methyloprofundus sedimenti to methane starvation and recovery was characterized. By combining lipid...

  16. Studies of the reproductive biology of deep sea megabenthos VIII. Biochemical and calorific content of the reproductive organs of deep sea holothurians

    International Nuclear Information System (INIS)

    Tyler, P.A.; Walker, M.

    1987-01-01

    The data for protein, lipid, carbohydrate and ash content of the ovary, testes, gut and body wall of a variety of deep sea holothurians are presented. The dominant biochemical is insoluble protein in all tissues followed by lipid in the ovary. The ash content was lowest in the gonads and highest in the body wall of most species. The mean calorific content of the species studied is 25.08Jmg -1 thus representing a significant energy store in the deep sea. The data suggest active metabolic pathways in these species which may pass radionuclides to the developing gametes and after spawning to dispersal in deep waters. (author)

  17. A Modeling Study of Deep Water Renewal in the Red Sea

    Science.gov (United States)

    Yao, F.; Hoteit, I.

    2016-02-01

    Deep water renewal processes in the Red Sea are examined in this study using a 50-year numerical simulation from 1952-2001. The deep water in the Red Sea below the thermocline ( 200 m) exhibits a near-uniform vertical structure in temperature and salinity, but geochemical tracer distributions, such as 14C and 3He, and dissolved oxygen concentrations indicate that the deep water is renewed on time scales as short as 36 years. The renewal process is accomplished through a deep overturning cell that consists of a southward bottom current and a northward returning current at depths of 400-600 m. Three sources regions are proposed for the formation of the deep water, including two deep outflows from the Gulfs of Aqaba and Suez and winter deep convections in the northern Red Sea. The MITgcm (MIT general circulation model), which has been used to simulate the shallow overturning circulations in the Red Sea, is configured in this study with increased resolutions in the deep water. During the 50 years of simulation, artificial passive tracers added in the model indicate that the deep water in the Red Sea was only episodically renewed during some anomalously cold years; two significant episodes of deep water renewal are reproduced in the winters of 1983 and 1992, in accordance with reported historical hydrographic observations. During these renewal events, deep convections reaching the bottom of the basin occurred, which further facilitated deep sinking of the outflows from the Gulfs of Aqaba and Suez. Ensuing spreading of the newly formed deep water along the bottom caused upward displacements of thermocline, which may have profound effects on the water exchanges in the Strait of Bab el Mandeb between the Red Sea and the Gulf of Aden and the functioning of the ecosystem in the Red Sea by changing the vertical distributions of nutrients.

  18. Contrasting trends in North Atlantic deep-water formation in the Labrador Sea and Nordic Seas during the Holocene

    NARCIS (Netherlands)

    Renssen, H.; Goosse, H.; Fichefet, T.

    2005-01-01

    The Holocene North Atlantic deep-water formation is studied in a 9,000-year long simulation with a coupled climate model of intermediate complexity, forced by changes in orbital forcing and atmospheric trace gas concentrations. During the experiment, deep-water formation in the Nordic Seas is

  19. Deep-sea ciliates: Recorded diversity and experimental studies on pressure tolerance

    Science.gov (United States)

    Schoenle, Alexandra; Nitsche, Frank; Werner, Jennifer; Arndt, Hartmut

    2017-10-01

    Microbial eukaryotes play an important role in biogeochemical cycles not only in productive surface waters but also in the deep sea. Recent studies based on metagenomics report deep-sea protistan assemblages totally different from continental slopes and shelf waters. To give an overview about the ciliate fauna recorded from the deep sea we summarized the available information on ciliate occurrence in the deep sea. Our literature review revealed that representatives of the major phylogenetic groups of ciliates were recorded from the deep sea (> 1000 m depth): Karyorelictea, Heterotrichea, Spirotrichea (Protohypotrichia, Euplotia, Oligotrichia, Choreotrichia, Hypotrichia), Armophorea (Armophorida), Litostomatea (Haptoria), Conthreep (Phyllopharyngea incl. Cyrtophoria, Chonotrichia, Suctoria; Nassophorea incl. Microthoracida, Synhymeniida, Nassulida; Colpodea incl. Bursariomorphida, Cyrtolophosidida; Prostomatea; Plagiopylea incl. Plagiopylida, Odontostomatida; Oligohymenophorea incl. Peniculia, Scuticociliatia, Hymenostomatia, Apostomatia, Peritrichia, Astomatia). Species occurring in both habitats, deep sea and shallow water, are rarely found to our knowledge to date. This indicates a high deep-sea specific ciliate fauna. Our own studies of similar genotypes (SSU rDNA and cox1 gene) revealed that two small scuticociliate species (Pseudocohnilembus persalinus and Uronema sp.) could be isolated from surface as well as deep waters (2687 m, 5276 m, 5719 m) of the Pacific. The adaptation to deep-sea conditions was investigated by exposing the ciliate isolates directly or stepwise to different hydrostatic pressures ranging from 1 to 550 atm at temperatures of 2 °C and 13 °C. Although the results indicated no general barophilic behavior, all four isolated strains survived the highest established pressure. A better survival at 550 atm could be observed for the lower temperature. Among microbial eukaryotes, ciliates should be considered as a diverse and potentially

  20. 75 FR 7435 - Fisheries of the Northeastern United States; Atlantic Deep-Sea Red Crab Fisheries; 2010 Atlantic...

    Science.gov (United States)

    2010-02-19

    .... 100105009-0053-01] RIN 0648-AY51 Fisheries of the Northeastern United States; Atlantic Deep-Sea Red Crab Fisheries; 2010 Atlantic Deep-Sea Red Crab Specifications AGENCY: National Marine Fisheries Service (NMFS... comments. SUMMARY: NMFS proposes 2010 specifications for the Atlantic deep-sea red crab fishery, including...

  1. Deep-Sea, Deep-Sequencing: Metabarcoding Extracellular DNA from Sediments of Marine Canyons.

    Directory of Open Access Journals (Sweden)

    Magdalena Guardiola

    Full Text Available Marine sediments are home to one of the richest species pools on Earth, but logistics and a dearth of taxonomic work-force hinders the knowledge of their biodiversity. We characterized α- and β-diversity of deep-sea assemblages from submarine canyons in the western Mediterranean using an environmental DNA metabarcoding. We used a new primer set targeting a short eukaryotic 18S sequence (ca. 110 bp. We applied a protocol designed to obtain extractions enriched in extracellular DNA from replicated sediment corers. With this strategy we captured information from DNA (local or deposited from the water column that persists adsorbed to inorganic particles and buffered short-term spatial and temporal heterogeneity. We analysed replicated samples from 20 localities including 2 deep-sea canyons, 1 shallower canal, and two open slopes (depth range 100-2,250 m. We identified 1,629 MOTUs, among which the dominant groups were Metazoa (with representatives of 19 phyla, Alveolata, Stramenopiles, and Rhizaria. There was a marked small-scale heterogeneity as shown by differences in replicates within corers and within localities. The spatial variability between canyons was significant, as was the depth component in one of the canyons where it was tested. Likewise, the composition of the first layer (1 cm of sediment was significantly different from deeper layers. We found that qualitative (presence-absence and quantitative (relative number of reads data showed consistent trends of differentiation between samples and geographic areas. The subset of exclusively benthic MOTUs showed similar patterns of β-diversity and community structure as the whole dataset. Separate analyses of the main metazoan phyla (in number of MOTUs showed some differences in distribution attributable to different lifestyles. Our results highlight the differentiation that can be found even between geographically close assemblages, and sets the ground for future monitoring and conservation

  2. Restoration of deep-sea macrofauna after simulated benthic disturbance in the Central Indian Basin

    Digital Repository Service at National Institute of Oceanography (India)

    Ingole, B.S.; Pavithran, S.; Ansari, Z.A.

    feeding by holoyhurians in the deep sea: some observations and comments. Progress in Oceanography 50, 407-421. Glasby, G.P., 1977. Marine manganese deposits. Elsevier, Amsterdam, pp.523. Grassle, J.F. and Sanders, H.L., 1973. Life histories and role... gesamten Hydrobiologie 77, 331-339. Thiel, H., 2001. Use and protection of the deep sea - an introduction. Deep-Sea Research II 48, (17-18), 3427-3431. Trueblood, D., Ozturgut, E., Pilipchuk, M., Gloumov, I. 1997. The ecological impacts of the joint U...

  3. An abyssal mobilome: viruses, plasmids and vesicles from deep-sea hydrothermal vents.

    Science.gov (United States)

    Lossouarn, Julien; Dupont, Samuel; Gorlas, Aurore; Mercier, Coraline; Bienvenu, Nadege; Marguet, Evelyne; Forterre, Patrick; Geslin, Claire

    2015-12-01

    Mobile genetic elements (MGEs) such as viruses, plasmids, vesicles, gene transfer agents (GTAs), transposons and transpovirions, which collectively represent the mobilome, interact with cellular organisms from all three domains of life, including those thriving in the most extreme environments. While efforts have been made to better understand deep-sea vent microbial ecology, our knowledge of the mobilome associated with prokaryotes inhabiting deep-sea hydrothermal vents remains limited. Here we focus on the abyssal mobilome by reviewing accumulating data on viruses, plasmids and vesicles associated with thermophilic and hyperthermophilic Bacteria and Archaea present in deep-sea hydrothermal vents. Copyright © 2015 Institut Pasteur. Published by Elsevier Masson SAS. All rights reserved.

  4. Food web transport of trace metals and radionuclides from the deep sea: a review

    International Nuclear Information System (INIS)

    Young, J.S.

    1979-06-01

    This report summarizes aspects of the potential distribution pathways of metals and radionuclides, particularly Co and Ni, through a biological trophic framework after their deposition at 4000 to 5000 meters in the North Atlantic or North Pacific. It discusses (a) the basic, deep-sea trophic structure of eutrophic and oligotrophic regions; (b) the transport pathways of biologically available energy to and from the deep sea, pathways that may act as accumulators and vectors of radionuclide distribution, and (c) distribution routes that have come into question as potential carriers of radionuclides from the deep-sea bed to man

  5. Real-Time Visualization System for Deep-Sea Surveying

    Directory of Open Access Journals (Sweden)

    Yujie Li

    2014-01-01

    Full Text Available Remote robotic exploration holds vast potential for gaining knowledge about extreme environments, which is difficult to be accessed by humans. In the last two decades, various underwater devices were developed for detecting the mines and mine-like objects in the deep-sea environment. However, there are some problems in recent equipment, like poor accuracy of mineral objects detection, without real-time processing, and low resolution of underwater video frames. Consequently, the underwater objects recognition is a difficult task, because the physical properties of the medium, the captured video frames, are distorted seriously. In this paper, we are considering use of the modern image processing methods to determine the mineral location and to recognize the mineral actually within a little computation complex. We firstly analyze the recent underwater imaging models and propose a novel underwater optical imaging model, which is much closer to the light propagation model in the underwater environment. In our imaging system, we remove the electrical noise by dual-tree complex wavelet transform. And then we solve the nonuniform illumination of artificial lights by fast guided trilateral bilateral filter and recover the image color through automatic color equalization. Finally, a shape-based mineral recognition algorithm is proposed for underwater objects detection. These methods are designed for real-time execution on limited-memory platforms. This pipeline is suitable for detecting underwater objects in practice by our experiences. The initial results are presented and experiments demonstrate the effectiveness of the proposed real-time visualization system.

  6. Sungsanpin, a lasso peptide from a deep-sea streptomycete.

    Science.gov (United States)

    Um, Soohyun; Kim, Young-Joo; Kwon, Hyuknam; Wen, He; Kim, Seong-Hwan; Kwon, Hak Cheol; Park, Sunghyouk; Shin, Jongheon; Oh, Dong-Chan

    2013-05-24

    Sungsanpin (1), a new 15-amino-acid peptide, was discovered from a Streptomyces species isolated from deep-sea sediment collected off Jeju Island, Korea. The planar structure of 1 was determined by 1D and 2D NMR spectroscopy, mass spectrometry, and UV spectroscopy. The absolute configurations of the stereocenters in this compound were assigned by derivatizations of the hydrolysate of 1 with Marfey's reagents and 2,3,4,6-tetra-O-acetyl-β-d-glucopyranosyl isothiocyanate, followed by LC-MS analysis. Careful analysis of the ROESY NMR spectrum and three-dimensional structure calculations revealed that sungsanpin possesses the features of a lasso peptide: eight amino acids (-Gly(1)-Phe-Gly-Ser-Lys-Pro-Ile-Asp(8)-) that form a cyclic peptide and seven amino acids (-Ser(9)-Phe-Gly-Leu-Ser-Trp-Leu(15)) that form a tail that loops through the ring. Sungsanpin is thus the first example of a lasso peptide isolated from a marine-derived microorganism. Sungsanpin displayed inhibitory activity in a cell invasion assay with the human lung cancer cell line A549.

  7. The permeability and consolidation of deep-sea sediments

    International Nuclear Information System (INIS)

    Schultheiss, P.J.; Gunn, D.E.

    1985-01-01

    This report presents permeability and consolidation data for a wide range of sediment types. Permeability is one of the two parameters which are needed to directly quantify pore water advection in deep sea sediments and which are being investigated in high-level radioactive waste study areas. While it is desirable that these parameters should be measured in situ it is argued that values of permeability can be measured sufficiently accurately in the laboratory from core samples. Consequently, an apparatus has been developed which enables sediment permeability to be measured at decreasing void ratios during a back-pressured consolidation test. Data presented in this report from over 60 samples have established the major differences in permeability between various sediment types and how permeability changes as a function of burial depth and void ratio. Samples from two study areas in the North Atlantic Ocean, King's Trough Flank (KTF) and Great Meteor East (GME), have been compared with samples of Red Clay (RC) obtained from the NW Pacific Ocean. Results are presented and discussed. (author)

  8. Hydration of high-silica glasses in the deep sea

    International Nuclear Information System (INIS)

    Federman, A.N.

    1986-01-01

    Natural analogs of nuclear waste glasses are important because they provide information of the one variable that is not controllable in the laboratory - long intervals of time in the actual environment of storage. Some natural glasses have persisted for millions of years in deep-sea sediments in the form of disseminated particles and distinct tephra layers, while other apparently similar specimens have been completely altered to clay assemblages relatively quickly. Geologists have reached no firm conclusions as to why these differences exist, and more research is certainly warranted. These glasses vary in age, composition, and in the in-situ conditions they have experienced. They may provide important information for two different aspects of nuclear waste glass research: First, the chemical composition and especially the water content of these glasses as a function of time may give an understanding of the mechanisms and rates of diffusion in glasses in the natural environment. Second, the apparent differing durability of these glasses in different environmental conditions may suggest the optimal characteristics of a nuclear waste glass depository

  9. Reactive Fe(II) layers in deep-sea sediments

    Science.gov (United States)

    König, Iris; Haeckel, Matthias; Drodt, Matthias; Suess, Erwin; Trautwein, Alfred X.

    1999-05-01

    The percentage of the structural Fe(II) in clay minerals that is readily oxidized to Fe(III) upon contact with atmospheric oxygen was determined across the downcore tan-green color change in Peru Basin sediments. This latent fraction of reactive Fe(II) was only found in the green strata, where it proved to be large enough to constitute a deep reaction layer with respect to the pore water O 2 and NO 3-. Large variations were detected in the proportion of the reactive Fe(II) concentration to the organic matter content along core profiles. Hence, the commonly observed tan-green color change in marine sediments marks the top of a reactive Fe(II) layer, which may represent the major barrier to the movement of oxidation fronts in pelagic subsurface sediments. This is also demonstrated by numerical model simulations. The findings imply that geochemical barriers to pore water oxidation fronts form diagenetically in the sea floor wherever the stage of iron reduction is reached, provided that the sediments contain a significant amount of structural iron in clay minerals.

  10. The fluid dynamics of deep-sea mining

    Science.gov (United States)

    Peacock, Thomas; Rzeznik, Andrew

    2017-11-01

    With vast mineral deposits on the ocean floor, deep-sea nodule mining operations are expected to commence in the next decade. Among several fundamental fluid dynamics problems, this could involve plans for dewatering plumes to be released into the water column by surface processing vessels. To study this scenario, we consider the effects of non-uniform, realistic stratifications on forced compressible plumes with finite initial size. The classical plume model is developed to take into account the influence of thermal conduction through the dewatering pipe and also compressibility effects, for which a dimensionless number is introduced to determine their importance compared to the background stratification. Among other things, our results show that small-scale features of a realistic stratification can have a large effect on plume dynamics compared to smoothed profiles and that for any given set of environmental parameters there is a discharge flow rate that minimizes the plume vertical extent. Our findings are put in the context of nodule mining plumes for which the rapid and efficient re-sedimentation of waste material has important environmental consequences.

  11. Deep-sea genetic resources: New frontiers for science and stewardship in areas beyond national jurisdiction

    Science.gov (United States)

    Harden-Davies, Harriet

    2017-03-01

    The deep-sea is a large source of marine genetic resources (MGR), which have many potential uses and are a growing area of research. Much of the deep-sea lies in areas beyond national jurisdiction (ABNJ), including 65% of the global ocean. MGR in ABNJ occupy a significant gap in the international legal framework. Access and benefit sharing of MGR is a key issue in the development of a new international legally-binding instrument under the United Nations Convention on the Law of the Sea (UNCLOS) for the conservation and sustainable use of marine biological diversity in ABNJ. This paper examines how this is relevant to deep-sea scientific research and identifies emerging challenges and opportunities. There is no internationally agreed definition of MGR, however, deep-sea genetic resources could incorporate any biological material including genes, proteins and natural products. Deep-sea scientific research is the key actor accessing MGR in ABNJ and sharing benefits such as data, samples and knowledge. UNCLOS provides the international legal framework for marine scientific research, international science cooperation, capacity building and marine technology transfer. Enhanced implementation could support access and benefit sharing of MGR in ABNJ. Deep-sea scientific researchers could play an important role in informing practical new governance solutions for access and benefit sharing of MGR that promote scientific research in ABNJ and support deep-sea stewardship. Advancing knowledge of deep-sea biodiversity in ABNJ, enhancing open-access to data and samples, standardisation and international marine science cooperation are significant potential opportunity areas.

  12. Deep-sea bioluminescence blooms after dense water formation at the ocean surface.

    Directory of Open Access Journals (Sweden)

    Christian Tamburini

    Full Text Available The deep ocean is the largest and least known ecosystem on Earth. It hosts numerous pelagic organisms, most of which are able to emit light. Here we present a unique data set consisting of a 2.5-year long record of light emission by deep-sea pelagic organisms, measured from December 2007 to June 2010 at the ANTARES underwater neutrino telescope in the deep NW Mediterranean Sea, jointly with synchronous hydrological records. This is the longest continuous time-series of deep-sea bioluminescence ever recorded. Our record reveals several weeks long, seasonal bioluminescence blooms with light intensity up to two orders of magnitude higher than background values, which correlate to changes in the properties of deep waters. Such changes are triggered by the winter cooling and evaporation experienced by the upper ocean layer in the Gulf of Lion that leads to the formation and subsequent sinking of dense water through a process known as "open-sea convection". It episodically renews the deep water of the study area and conveys fresh organic matter that fuels the deep ecosystems. Luminous bacteria most likely are the main contributors to the observed deep-sea bioluminescence blooms. Our observations demonstrate a consistent and rapid connection between deep open-sea convection and bathypelagic biological activity, as expressed by bioluminescence. In a setting where dense water formation events are likely to decline under global warming scenarios enhancing ocean stratification, in situ observatories become essential as environmental sentinels for the monitoring and understanding of deep-sea ecosystem shifts.

  13. Deep-sea bioluminescence blooms after dense water formation at the ocean surface.

    Science.gov (United States)

    Tamburini, Christian; Canals, Miquel; Durrieu de Madron, Xavier; Houpert, Loïc; Lefèvre, Dominique; Martini, Séverine; D'Ortenzio, Fabrizio; Robert, Anne; Testor, Pierre; Aguilar, Juan Antonio; Samarai, Imen Al; Albert, Arnaud; André, Michel; Anghinolfi, Marco; Anton, Gisela; Anvar, Shebli; Ardid, Miguel; Jesus, Ana Carolina Assis; Astraatmadja, Tri L; Aubert, Jean-Jacques; Baret, Bruny; Basa, Stéphane; Bertin, Vincent; Biagi, Simone; Bigi, Armando; Bigongiari, Ciro; Bogazzi, Claudio; Bou-Cabo, Manuel; Bouhou, Boutayeb; Bouwhuis, Mieke C; Brunner, Jurgen; Busto, José; Camarena, Francisco; Capone, Antonio; Cârloganu, Christina; Carminati, Giada; Carr, John; Cecchini, Stefano; Charif, Ziad; Charvis, Philippe; Chiarusi, Tommaso; Circella, Marco; Coniglione, Rosa; Costantini, Heide; Coyle, Paschal; Curtil, Christian; Decowski, Patrick; Dekeyser, Ivan; Deschamps, Anne; Donzaud, Corinne; Dornic, Damien; Dorosti, Hasankiadeh Q; Drouhin, Doriane; Eberl, Thomas; Emanuele, Umberto; Ernenwein, Jean-Pierre; Escoffier, Stéphanie; Fermani, Paolo; Ferri, Marcelino; Flaminio, Vincenzo; Folger, Florian; Fritsch, Ulf; Fuda, Jean-Luc; Galatà, Salvatore; Gay, Pascal; Giacomelli, Giorgio; Giordano, Valentina; Gómez-González, Juan-Pablo; Graf, Kay; Guillard, Goulven; Halladjian, Garadeb; Hallewell, Gregory; van Haren, Hans; Hartman, Joris; Heijboer, Aart J; Hello, Yann; Hernández-Rey, Juan Jose; Herold, Bjoern; Hößl, Jurgen; Hsu, Ching-Cheng; de Jong, Marteen; Kadler, Matthias; Kalekin, Oleg; Kappes, Alexander; Katz, Uli; Kavatsyuk, Oksana; Kooijman, Paul; Kopper, Claudio; Kouchner, Antoine; Kreykenbohm, Ingo; Kulikovskiy, Vladimir; Lahmann, Robert; Lamare, Patrick; Larosa, Giuseppina; Lattuada, Dario; Lim, Gordon; Presti, Domenico Lo; Loehner, Herbert; Loucatos, Sotiris; Mangano, Salvatore; Marcelin, Michel; Margiotta, Annarita; Martinez-Mora, Juan Antonio; Meli, Athina; Montaruli, Teresa; Moscoso, Luciano; Motz, Holger; Neff, Max; Nezri, Emma Nuel; Palioselitis, Dimitris; Păvălaş, Gabriela E; Payet, Kevin; Payre, Patrice; Petrovic, Jelena; Piattelli, Paolo; Picot-Clemente, Nicolas; Popa, Vlad; Pradier, Thierry; Presani, Eleonora; Racca, Chantal; Reed, Corey; Riccobene, Giorgio; Richardt, Carsten; Richter, Roland; Rivière, Colas; Roensch, Kathrin; Rostovtsev, Andrei; Ruiz-Rivas, Joaquin; Rujoiu, Marius; Russo, Valerio G; Salesa, Francisco; Sánchez-Losa, Augustin; Sapienza, Piera; Schöck, Friederike; Schuller, Jean-Pierre; Schussler, Fabian; Shanidze, Rezo; Simeone, Francesco; Spies, Andreas; Spurio, Maurizio; Steijger, Jos J M; Stolarczyk, Thierry; Taiuti, Mauro G F; Toscano, Simona; Vallage, Bertrand; Van Elewyck, Véronique; Vannoni, Giulia; Vecchi, Manuela; Vernin, Pascal; Wijnker, Guus; Wilms, Jorn; de Wolf, Els; Yepes, Harold; Zaborov, Dmitry; De Dios Zornoza, Juan; Zúñiga, Juan

    2013-01-01

    The deep ocean is the largest and least known ecosystem on Earth. It hosts numerous pelagic organisms, most of which are able to emit light. Here we present a unique data set consisting of a 2.5-year long record of light emission by deep-sea pelagic organisms, measured from December 2007 to June 2010 at the ANTARES underwater neutrino telescope in the deep NW Mediterranean Sea, jointly with synchronous hydrological records. This is the longest continuous time-series of deep-sea bioluminescence ever recorded. Our record reveals several weeks long, seasonal bioluminescence blooms with light intensity up to two orders of magnitude higher than background values, which correlate to changes in the properties of deep waters. Such changes are triggered by the winter cooling and evaporation experienced by the upper ocean layer in the Gulf of Lion that leads to the formation and subsequent sinking of dense water through a process known as "open-sea convection". It episodically renews the deep water of the study area and conveys fresh organic matter that fuels the deep ecosystems. Luminous bacteria most likely are the main contributors to the observed deep-sea bioluminescence blooms. Our observations demonstrate a consistent and rapid connection between deep open-sea convection and bathypelagic biological activity, as expressed by bioluminescence. In a setting where dense water formation events are likely to decline under global warming scenarios enhancing ocean stratification, in situ observatories become essential as environmental sentinels for the monitoring and understanding of deep-sea ecosystem shifts.

  14. Ship Sensor Observations for Deep Sea Medicines 2003 - Office of Ocean Exploration

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Hourly measurements made by selected ship sensors on the NOAA ship Ronald H. Brown during the "Deep Sea Medicines 2003: Exploration of the Gulf of Mexico" expedition...

  15. Knorr 147 Leg V Hydrographic Data Report: Labrador Sea Deep Convection Experiment

    National Research Council Canada - National Science Library

    Zimmerman, Sarah

    2000-01-01

    Between 2 February and 20 March 1997, the first phase of the Labrador Sea Deep Convection Experiment was carried out on R/V Knorr, during which 127 hydrographic stations were occupied throughout the Labrador basin...

  16. Penaeoid and sergestoid shrimps from the deep scattering layer (DSL) in the Arabian Sea

    Digital Repository Service at National Institute of Oceanography (India)

    Karuppasamy, P.K.; Menon, N.G.

    Results of a preliminary study on the occurrence and distribution of seventeen species of Penaeoid and Sergestoid shrimps from the deep scattering layer (DSL) of the Indian EEZ of Arabian Sea are presented here based on the IKMT samples collected...

  17. Recovery of deep-sea meiofauna after artificial disturbance in the Central Indian Basin

    Digital Repository Service at National Institute of Oceanography (India)

    Ingole, B.S.; Goltekar, N.R.; Gonsalves, S.; Ansari, Z.A.

    -1 1 Recovery of Deep-sea Meiofauna after Artificial Disturbance in the Central Indian Basin INGOLE B.S*., R. GOLTEKAR, S. GONSALVES and Z. A. ANSARI Biological Oceanography Division, National Institute of Oceanography, Dona Paula, Goa; 403004...

  18. Bacterial Diversity in Deep-Sea Sediments from Afanasy Nikitin Seamount, Equatorial Indian Ocean

    Digital Repository Service at National Institute of Oceanography (India)

    Khandeparker, R.; Meena, R.M.; Deobagkar, D.D.

    Deep-sea sediments can reveal much about the last 200 million years of Earth history, including the history of ocean life and climate. Microbial diversity in Afanasy Nikitin seamount located at Equatorial East Indian Ocean (EEIO) was investigated...

  19. AFSC/RACE/GAP/Rooper: Deep sea coral and sponge distribution

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — As part of a series of ongoing research projects, the AFSC has been mapping and modeling the distribution of deep-sea coral and sponge communities throughout Alaska....

  20. Ship Track for Deep Sea Medicines 2003 - Office of Ocean Exploration

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Ship track of the Ronald H. Brown during the "Deep Sea Medicines 2003: Exploring the Gulf of Mexico" expedition sponsored by the National Oceanic and Atmospheric...

  1. Deep-sea fungi as a source of alkaline and cold-tolerant proteases

    Digital Repository Service at National Institute of Oceanography (India)

    Damare, S.R.; Raghukumar, C.; Muraleedharan, U.; Raghukumar, S.

    ,5]. Fungi and their enzymes from the deep-sea environment have received scant attention. Proteins and peptides constitute a substantial portion of the organic nutrients present in the deep-sea sediments as well as suspended particulate matter [6... alkaline protease using a qualitative plate assay on Czapek Dox agar (CDA) supplemented with 1% skimmed milk powder (Trade name Sagar, India). Clearance zone produced around the fungal colonies in plates indicated protease positive reaction [19...

  2. Environmental studies for mining of deep-sea polymetallic nodules - Accomplishments and future plans

    Digital Repository Service at National Institute of Oceanography (India)

    Sharma, R.

    on marine ecosystem, the project on ‘EIA studies for nodule mining in CIB’ was initiated in 1996, under the national programme on polymetallic nodules funded by the Dept. of Ocean Development. Mining of the deep-sea minerals [1] is expected to alter... for the future • Development of predictive ecosystem models • Creation of environmental database • Evaluating the biogeochemical coupling of biota with deep-sea ecosystem • Development of environment management plan for nodule mining References...

  3. Exponential Decline of Deep-Sea Ecosystem Functioning Linked to Benthic Biodiversity Loss

    OpenAIRE

    Danovaro, Roberto; Gambi, Cristina; Dell'Anno, Antonio; Corinaldesi, Cinzia; Fraschetti, Simonetta; Vanreusel, Ann; Vincx, Magda; Gooday, Andrew J.

    2008-01-01

    BackgroundRecent investigations suggest that biodiversity loss might impair the functioning and sustainability of ecosystems. Although deep-sea ecosystems are the most extensive on Earth, represent the largest reservoir of biomass, and host a large proportion of undiscovered biodiversity, the data needed to evaluate the consequences of biodiversity loss on the ocean floor are completely lacking.ResultsHere, we present a global-scale study based on 116 deep-sea sites that relates benthic biodi...

  4. De novo transcriptome assembly and positive selection analysis of an individual deep-sea fish.

    Science.gov (United States)

    Lan, Yi; Sun, Jin; Xu, Ting; Chen, Chong; Tian, Renmao; Qiu, Jian-Wen; Qian, Pei-Yuan

    2018-05-24

    High hydrostatic pressure and low temperatures make the deep sea a harsh environment for life forms. Actin organization and microtubules assembly, which are essential for intracellular transport and cell motility, can be disrupted by high hydrostatic pressure. High hydrostatic pressure can also damage DNA. Nucleic acids exposed to low temperatures can form secondary structures that hinder genetic information processing. To study how deep-sea creatures adapt to such a hostile environment, one of the most straightforward ways is to sequence and compare their genes with those of their shallow-water relatives. We captured an individual of the fish species Aldrovandia affinis, which is a typical deep-sea inhabitant, from the Okinawa Trough at a depth of 1550 m using a remotely operated vehicle (ROV). We sequenced its transcriptome and analyzed its molecular adaptation. We obtained 27,633 protein coding sequences using an Illumina platform and compared them with those of several shallow-water fish species. Analysis of 4918 single-copy orthologs identified 138 positively selected genes in A. affinis, including genes involved in microtubule regulation. Particularly, functional domains related to cold shock as well as DNA repair are exposed to positive selection pressure in both deep-sea fish and hadal amphipod. Overall, we have identified a set of positively selected genes related to cytoskeleton structures, DNA repair and genetic information processing, which shed light on molecular adaptation to the deep sea. These results suggest that amino acid substitutions of these positively selected genes may contribute crucially to the adaptation of deep-sea animals. Additionally, we provide a high-quality transcriptome of a deep-sea fish for future deep-sea studies.

  5. Genetic diversity of archaea in deep-sea hydrothermal vent environments.

    OpenAIRE

    Takai, K; Horikoshi, K

    1999-01-01

    Molecular phylogenetic analysis of naturally occurring archaeal communities in deep-sea hydrothermal vent environments was carried out by PCR-mediated small subunit rRNA gene (SSU rDNA) sequencing. As determined through partial sequencing of rDNA clones amplified with archaea-specific primers, the archaeal populations in deep-sea hydrothermal vent environments showed a great genetic diversity, and most members of these populations appeared to be uncultivated and unidentified organisms. In the...

  6. A review on deep-sea fungi: Occurrence, diversity and adaptions

    Digital Repository Service at National Institute of Oceanography (India)

    Raghukumar, C.; Damare, S.R.; Singh, P.

    soil. In contrast to land, however, most studies on deep-sea sediments have focused exclusively on bacteria and have demonstrated their intense metabolic activities therein (Turley and Dixon 2002). The fungi and their role in the deep-sea sediments... polymerization and form brown-coloured products, constituting humus (Tisdall and Oades 1982). The humic material combines with soil particles to form microaggregates. Fungal hyphae further act as binding agents to form macroaggregates by trapping fine particles...

  7. An abyssal mobilome: Viruses, plasmids and vesicles from deep-sea hydrothermal vents

    OpenAIRE

    Lossouarn, Julien; Dupont, Samuel; Gorlas, Aurore; Mercier, Coraline; Bienvenu, Nadege; Marguet, Evelyne; Forterre, Patrick; Geslin, Claire

    2015-01-01

    Mobile genetic elements (MGEs) such as viruses, plasmids, vesicles, gene transfer agents (GTAs), transposons and transpovirions, which collectively represent the mobilome, interact with cellular organisms from all three domains of life, including those thriving in the most extreme environments. While efforts have been made to better understand deep-sea vent microbial ecology, our knowledge of the mobilome associated with prokaryotes inhabiting deep-sea hydrothermal vents remains limited. Here...

  8. The circulation of deep water in the Tasman and Coral seas

    International Nuclear Information System (INIS)

    Harries, J.R.

    1976-07-01

    The physical oceanography of the Tasman and Coral Seas is reviewed with an emphasis on the deep currents. There are many uncertainties in the deep circulation pattern. The available data are used to develop an idealised circulation to estimate the likely path taken by water flowing from a depth of 5000 m in the Tasman Sea. The model suggests that the water would finally reach the surface layers south of the Antarctic Convergence with a median delay of 600 years. (author)

  9. Fossil manganese nodules from Timor: geochemical and radiochemical evidence for deep-sea origin

    International Nuclear Information System (INIS)

    Margolis, S.V.; Fein, C.D.; Glasby, G.P.; Audley-Charles, M.G.

    1978-01-01

    Fossil Mn nodules of Cretaceous age from western Timor exhibit chemical, structural and radioisotope compositions consistent with their being of deep-sea origin. These nodules show characteristics similar to nodules now found at depths of 3,500-5,000 m in the Pacific and Indian Oceans. Slight differences in the fine structure and chemistry of these nodules and modern deep-sea nodules are attributed to diagenetic alteration after uplift of enclosing sediments

  10. GEOSTAR deep sea floor missions: magnetic data analysis and 1D geo electric structure underneath the Southern Tyrrhenian Sea

    International Nuclear Information System (INIS)

    Vitale, S.; De Santis, A.; Di Mauro, D.; Cafarella, L.; Palangio, P.; Beranzoli, L.; Favali, P.

    2009-01-01

    From 2000 to 2005 two geophysical exploration missions were undertaken in the Tyrrenian deep sea floor at depth between -2000 and -3000 m in the framework of the European-funded GEOSTAR Projects. The considered missions in this work are GEOSTAR-2 and ORION-GEOSTAR-3 with the main scientific objective of investigating the deep-sea floor by means of an automatic multiparameter benthic observatory station working continuously from around 5 to 12 months each time. During the two GEOSTAR deep sea floor missions, scalar and vector magnetometers acquired useful magnetic data both to improve global and regional geomagnetic reference models and to infer specific geo electric information about the two sites of magnetic measurements by means of a forward modelling.

  11. Species-energy relationship in the deep sea: A test using the Quaternary fossil record

    Science.gov (United States)

    Hunt, G.; Cronin, T. M.; Roy, K.

    2005-01-01

    Little is known about the processes regulating species richness in deep-sea communities. Here we take advantage of natural experiments involving climate change to test whether predictions of the species-energy hypothesis hold in the deep sea. In addition, we test for the relationship between temperature and species richness predicted by a recent model based on biochemical kinetics of metabolism. Using the deep-sea fossil record of benthic foraminifera and statistical meta-analyses of temperature-richness and productivity-richness relationships in 10 deep-sea cores, we show that temperature but not productivity is a significant predictor of species richness over the past c. 130 000 years. Our results not only show that the temperature-richness relationship in the deep-sea is remarkably similar to that found in terrestrial and shallow marine habitats, but also that species richness tracks temperature change over geological time, at least on scales of c. 100 000 years. Thus, predicting biotic response to global climate change in the deep sea would require better understanding of how temperature regulates the occurrences and geographical ranges of species. ??2005 Blackwell Publishing Ltd/CNRS.

  12. Potential Osteoporosis Recovery by Deep Sea Water through Bone Regeneration in SAMP8 Mice

    Directory of Open Access Journals (Sweden)

    Hen-Yu Liu

    2013-01-01

    Full Text Available The aim of this study is to examine the therapeutic potential of deep sea water (DSW on osteoporosis. Previously, we have established the ovariectomized senescence-accelerated mice (OVX-SAMP8 and demonstrated strong recovery of osteoporosis by stem cell and platelet-rich plasma (PRP. Deep sea water at hardness (HD 1000 showed significant increase in proliferation of osteoblastic cell (MC3T3 by MTT assay. For in vivo animal study, bone mineral density (BMD was strongly enhanced followed by the significantly increased trabecular numbers through micro-CT examination after a 4-month deep sea water treatment, and biochemistry analysis showed that serum alkaline phosphatase (ALP activity was decreased. For stage-specific osteogenesis, bone marrow-derived stromal cells (BMSCs were harvested and examined. Deep sea water-treated BMSCs showed stronger osteogenic differentiation such as BMP2, RUNX2, OPN, and OCN, and enhanced colony forming abilities, compared to the control group. Interestingly, most untreated OVX-SAMP8 mice died around 10 months; however, approximately 57% of DSW-treated groups lived up to 16.6 months, a life expectancy similar to the previously reported life expectancy for SAMR1 24 months. The results demonstrated the regenerative potentials of deep sea water on osteogenesis, showing that deep sea water could potentially be applied in osteoporosis therapy as a complementary and alternative medicine (CAM.

  13. Potential impact of global climate change on benthic deep-sea microbes.

    Science.gov (United States)

    Danovaro, Roberto; Corinaldesi, Cinzia; Dell'Anno, Antonio; Rastelli, Eugenio

    2017-12-15

    Benthic deep-sea environments are the largest ecosystem on Earth, covering ∼65% of the Earth surface. Microbes inhabiting this huge biome at all water depths represent the most abundant biological components and a relevant portion of the biomass of the biosphere, and play a crucial role in global biogeochemical cycles. Increasing evidence suggests that global climate changes are affecting also deep-sea ecosystems, both directly (causing shifts in bottom-water temperature, oxygen concentration and pH) and indirectly (through changes in surface oceans' productivity and in the consequent export of organic matter to the seafloor). However, the responses of the benthic deep-sea biota to such shifts remain largely unknown. This applies particularly to deep-sea microbes, which include bacteria, archaea, microeukaryotes and their viruses. Understanding the potential impacts of global change on the benthic deep-sea microbial assemblages and the consequences on the functioning of the ocean interior is a priority to better forecast the potential consequences at global scale. Here we explore the potential changes in the benthic deep-sea microbiology expected in the coming decades using case studies on specific systems used as test models. © FEMS 2017. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  14. Decadal trends in deep ocean salinity and regional effects on steric sea level

    Science.gov (United States)

    Purkey, S. G.; Llovel, W.

    2017-12-01

    We present deep (below 2000 m) and abyssal (below 4000 m) global ocean salinity trends from the 1990s through the 2010s and assess the role of deep salinity in local and global sea level budgets. Deep salinity trends are assessed using all deep basins with available full-depth, high-quality hydrographic section data that have been occupied two or more times since the 1980s through either the World Ocean Circulation Experiment (WOCE) Hydrographic Program or the Global Ship-Based Hydrographic Investigations Program (GO-SHIP). All salinity data is calibrated to standard seawater and any intercruise offsets applied. While the global mean deep halosteric contribution to sea level rise is close to zero (-0.017 +/- 0.023 mm/yr below 4000 m), there is a large regional variability with the southern deep basins becoming fresher and northern deep basins becoming more saline. This meridional gradient in the deep salinity trend reflects different mechanisms driving the deep salinity variability. The deep Southern Ocean is freshening owing to a recent increased flux of freshwater to the deep ocean. Outside of the Southern Ocean, the deep salinity and temperature changes are tied to isopycnal heave associated with a falling of deep isopycnals in recent decades. Therefore, regions of the ocean with a deep salinity minimum are experiencing both a halosteric contraction with a thermosteric expansion. While the thermosteric expansion is larger in most cases, in some regions the halosteric compensates for as much as 50% of the deep thermal expansion, making a significant contribution to local sea level rise budgets.

  15. The KM3NeT deep-sea neutrino telescope

    Energy Technology Data Exchange (ETDEWEB)

    Margiotta, Annarita

    2014-12-01

    KM3NeT is a deep-sea research infrastructure being constructed in the Mediterranean Sea. It will host the next generation Cherenkov neutrino telescope and nodes for a deep sea multidisciplinary observatory, providing oceanographers, marine biologists, and geophysicists with real time measurements. The neutrino telescope will complement IceCube in its field of view and exceed it substantially in sensitivity. Its main goal is the detection of high energy neutrinos of astrophysical origin. The detector will have a modular structure with six building blocks, each consisting of about 100 Detection Units (DUs). Each DU will be equipped with 18 multi-PMT digital optical modules. The first phase of construction has started and shore and deep-sea infrastructures hosting the future KM3NeT detector are being prepared in offshore Toulon, France and offshore Capo Passero on Sicily, Italy. The technological solutions for the neutrino detector of KM3NeT and the expected performance of the neutrino telescope are presented and discussed. - Highlights: • A deep-sea research infrastructure is being built in the Mediterranean Sea. • It will host a km{sup 3}-size neutrino telescope and a deep-sea multidisciplinary observatory. • The main goal of the neutrino telescope is the search for Galactic neutrino sources. • A major innovation is adopted in the design of the optical module. • 31 3 in. photomultiplier tubes (PMTs) will be hosted in the same glass sphere.

  16. Advances in deep-sea biology: biodiversity, ecosystem functioning and conservation. An introduction and overview

    Science.gov (United States)

    Cunha, Marina R.; Hilário, Ana; Santos, Ricardo S.

    2017-03-01

    Once considered as monotonous and devoid of life, the deep sea was revealed during the last century as an environment with a plethora of life forms and extremely high species richness (Rex and Etter, 2010). Underwater vehicle developments allowed direct observations of the deep, disclosing unique habitats and diverse seascapes, and other technological advances enabled manipulative experimentation and unprecedented prospects to pursue novel research topics (Levin and Sibuet, 2012; Danovaro et al., 2014). Alongside, the growing human population greatly increased the pressure on deep-sea ecosystems and the services they provide (Ramirez-Llodra et al., 2011; Thurber et al., 2014; Levin et al., 2016). Societal changes further intensified worldwide competition for natural resources, extending the present footprint of impacts over most of the global ocean (Halpern et al., 2008). In this socio-economic context, and in tandem with cutting edge technological advances and an unclear legal framework to regulate access to natural resources (Boyes and Elliott, 2014), the deep sea has emerged as a new opportunity for industrial exploitation and novel economic activities. The expanding use of the deep sea prompted a rapid reply from deep-sea scientists that recommended "a move from a frontier mentality of exploitation and single-sector management to a precautionary system that balances use of living marine resources, energy, and minerals from the deep ocean with maintenance of a productive and healthy marine environment, while improving knowledge and collaboration" and proposed "three directions to advance deep-ocean stewardship: i) protection and mitigation, ii) research, and iii) collaborative governance" (Mengerink et al., 2014). The European Marine Board position paper 22 (Rogers et al., 2015) further examined the key societal and environmental drivers confronting the deep sea and the role of deep-sea research to deliver future knowledge needs for science and society; a clear

  17. Monsoon control on trace metal fluxes in the deep Arabian Sea

    Indian Academy of Sciences (India)

    Monsoon control on trace metal fluxes in the deep Arabian Sea ... at marine boundaries and surface ocean processes: Forcings and feedbacks Volume 115 ... Annual Al fluxes at shallow and deep trap depths were 0.47 and 0.46 gm−2 in the ...

  18. Deep-Sea Bioluminescence Blooms after Dense Water Formation at the Ocean Surface

    NARCIS (Netherlands)

    Tamburini, C.; Canals, M.; de Madron, X.D.; Houpert, L.; Lefevre, D.; Martini, V.; D'Ortenzio, F.; Robert, A.; Testor, P.; Aguilar, J.A.; Al Samarai, I.; Albert, A.; Andre, M.; Anghinolfi, M.; Anton, G.; Anvar, S.; Ardid, M.; Jesus, A.C.A.; Astraatmadja, T.L.; Aubert, J.J.; Baret, B.; Basa, S.; Bertin, V.; Biagi, S.; Bigi, A.; Bigongiari, C.; Bogazzi, C.; Bou-Cabo, M.; Bouhou, B.; Bouwhuis, M.C.; Brunner, J.; Busto, J.; Camarena, F.; Capone, A.; Carloganu, C.; Carminati, G.; Carr, J.; Cecchini, S.; Charif, Z.; Charvis, P.; Chiarusi, T.; Circella, M.; Coniglione, R.; Costantini, H.; Coyle, P.; Curtil, C.; Decowski, P.; Dekeyser, I.; Deschamps, A.; Donzaud, C.; Dornic, D.; Dorosti, H.Q.; Drouhin, D.; Eberl, T.; Emanuele, U.; Ernenwein, J.P.; Escoffier, S.; Fermani, P.; Ferri, M.; Flaminio, V.; Folger, F.; Fritsch, U.; Fuda, J.L.; Galata, S.; Gay, P.; Giacomelli, G.; Giordano, V.; Gomez-Gonzalez, J.P.; Graf, K.; Guillard, G.; Halladjian, G.; Hallewell, G.; van Haren, H.; Hartman, J.; Heijboer, A.J.; Hello, Y.; Hernandez-Rey, J.J.; Herold, B.; Hossl, J.; Hsu, C.C.; De Jong, M.; Kadler, M.; Kalekin, O.; Kappes, A.; Katz, U.; Kavatsyuk, O.; Kooijman, P.; Kopper, C.; Kouchner, A.; Kreykenbohm, I.; Kulikovskiy, V.; Lahmann, R.; Lamare, P.; Larosa, G.; Lattuada, D.; Lim, G.; Lo Presti, D.; Loehner, H.; Loucatos, S.; Mangano, S.; Marcelin, M.; Margiotta, A.; Martinez-Mora, J.A.; Meli, A.; Montaruli, T.; Moscoso, L.; Motz, H.; Neff, M.; Nezri, E.N.; Palioselitis, D.; Pavalas, G.E.; Payet, K.; Payre, P.; Petrovic, J.; Piattelli, P.; Picot-Clemente, N.; Popa, V.; Pradier, T.; Presani, E.; Racca, C.; Reed, C.; Riccobene, G.; Richardt, C.; Richter, R.; Riviere, C.; Roensch, K.; Rostovtsev, A.; Ruiz-Rivas, J.; Rujoiu, M.; Russo, V.G.; Salesa, F.; Sanchez-Losa, A.; Sapienza, P.; Schock, F.; Schuller, J.P.; Schussler, F.; Shanidze, R.; Simeone, F.; Spies, A.; Spurio, M.; Steijger, J.J.M.; Stolarczyk, T.; Taiuti, M.G.F.; Toscano, S.; Vallage, B.; Van Elewyck, V.; Vannoni, G.; Vecchi, M.; Vernin, P.; Wijnker, G.; Wilms, J.; de Wolf, E.; Yepes, H.; Zaborov, D.; Zornoza, J.D.; Zuniga, J.

    2013-01-01

    The deep ocean is the largest and least known ecosystem on Earth. It hosts numerous pelagic organisms, most of which are able to emit light. Here we present a unique data set consisting of a 2.5-year long record of light emission by deep-sea pelagic organisms, measured from December 2007 to June

  19. Countermeasure Study on Deep-sea Oil Exploitation in the South China Sea——A Comparison between Deep-sea Oil Exploitation in the South China Sea and the Gulf of Mexico

    Science.gov (United States)

    Zhao, Hui; Qiu, Weiting; Qu, Weilu

    2018-02-01

    The unpromising situation of terrestrial oil resources makes the deep-sea oil industry become an important development strategy. The South China Sea has a vast sea area with a wide distribution of oil and gas resources, but there is a phenomenon that exploration and census rates and oil exploitation are low. In order to solve the above problems, this article analyzes the geology, oil and gas exploration and exploration equipment in the South China Sea and the Gulf of Mexico. Comparing the political environment of China and the United States energy industry and the economic environment of oil companies, this article points out China’s deep-sea oil exploration and mining problems that may exist. Finally, the feasibility of oil exploration and exploitation in the South China Sea is put forward, which will provide reference to improve the conditions of oil exploration in the South China Sea and promoting the stable development of China’s oil industry.

  20. A Dataset of Deep-Sea Fishes Surveyed by Research Vessels in the Waters around Taiwan

    Directory of Open Access Journals (Sweden)

    Kwang-Tsao Shao

    2014-12-01

    Full Text Available The study of deep-sea fish fauna is hampered by a lack of data due to the difficulty and high cost incurred in its surveys and collections. Taiwan is situated along the edge of the Eurasia fig, at the junction of three Large Marine Ecosystems or Ecoregions of the East China Sea, South China Sea and the Philippines. As nearly two-thirds of its surrounding marine ecosystems are deep-sea environments, Taiwan is expected to hold a rich diversity of deep-sea fish. However, in the past, no research vessels were employed to collect fish data on site. Only specimens, caught by bottom trawl fishing in the waters hundreds of meters deep and missing precise locality information, were collected from Dasi and Donggang fishing harbors. Began in 2001, with the support of National Science Council, research vessels were made available to take on the task of systematically collecting deep-sea fish specimens and occurrence records in the waters surrounding Taiwan. By the end of 2006, a total of 3,653 specimens, belonging to 26 orders, 88 families, 198 genera and 366 species, were collected in addition to data such as sampling site geographical coordinates and water depth, and fish body length and weight. The information, all accessible from the “Database of Taiwan’s Deep-Sea Fauna and Its Distribution (http://deepsea.biodiv.tw/” as part of the “Fish Database of Taiwan,” can benefit the study of temporal and spatial changes in distribution and abundance of fish fauna in the context of global deep-sea biodiversity.

  1. Man and the last great wilderness: human impact on the deep sea.

    Directory of Open Access Journals (Sweden)

    Eva Ramirez-Llodra

    Full Text Available The deep sea, the largest ecosystem on Earth and one of the least studied, harbours high biodiversity and provides a wealth of resources. Although humans have used the oceans for millennia, technological developments now allow exploitation of fisheries resources, hydrocarbons and minerals below 2000 m depth. The remoteness of the deep seafloor has promoted the disposal of residues and litter. Ocean acidification and climate change now bring a new dimension of global effects. Thus the challenges facing the deep sea are large and accelerating, providing a new imperative for the science community, industry and national and international organizations to work together to develop successful exploitation management and conservation of the deep-sea ecosystem. This paper provides scientific expert judgement and a semi-quantitative analysis of past, present and future impacts of human-related activities on global deep-sea habitats within three categories: disposal, exploitation and climate change. The analysis is the result of a Census of Marine Life--SYNDEEP workshop (September 2008. A detailed review of known impacts and their effects is provided. The analysis shows how, in recent decades, the most significant anthropogenic activities that affect the deep sea have evolved from mainly disposal (past to exploitation (present. We predict that from now and into the future, increases in atmospheric CO(2 and facets and consequences of climate change will have the most impact on deep-sea habitats and their fauna. Synergies between different anthropogenic pressures and associated effects are discussed, indicating that most synergies are related to increased atmospheric CO(2 and climate change effects. We identify deep-sea ecosystems we believe are at higher risk from human impacts in the near future: benthic communities on sedimentary upper slopes, cold-water corals, canyon benthic communities and seamount pelagic and benthic communities. We finalise this

  2. Man and the Last Great Wilderness: Human Impact on the Deep Sea

    Science.gov (United States)

    Ramirez-Llodra, Eva; Tyler, Paul A.; Baker, Maria C.; Bergstad, Odd Aksel; Clark, Malcolm R.; Escobar, Elva; Levin, Lisa A.; Menot, Lenaick; Rowden, Ashley A.; Smith, Craig R.; Van Dover, Cindy L.

    2011-01-01

    The deep sea, the largest ecosystem on Earth and one of the least studied, harbours high biodiversity and provides a wealth of resources. Although humans have used the oceans for millennia, technological developments now allow exploitation of fisheries resources, hydrocarbons and minerals below 2000 m depth. The remoteness of the deep seafloor has promoted the disposal of residues and litter. Ocean acidification and climate change now bring a new dimension of global effects. Thus the challenges facing the deep sea are large and accelerating, providing a new imperative for the science community, industry and national and international organizations to work together to develop successful exploitation management and conservation of the deep-sea ecosystem. This paper provides scientific expert judgement and a semi-quantitative analysis of past, present and future impacts of human-related activities on global deep-sea habitats within three categories: disposal, exploitation and climate change. The analysis is the result of a Census of Marine Life – SYNDEEP workshop (September 2008). A detailed review of known impacts and their effects is provided. The analysis shows how, in recent decades, the most significant anthropogenic activities that affect the deep sea have evolved from mainly disposal (past) to exploitation (present). We predict that from now and into the future, increases in atmospheric CO2 and facets and consequences of climate change will have the most impact on deep-sea habitats and their fauna. Synergies between different anthropogenic pressures and associated effects are discussed, indicating that most synergies are related to increased atmospheric CO2 and climate change effects. We identify deep-sea ecosystems we believe are at higher risk from human impacts in the near future: benthic communities on sedimentary upper slopes, cold-water corals, canyon benthic communities and seamount pelagic and benthic communities. We finalise this review with a short

  3. Structure, functioning, and cumulative stressors of Mediterranean deep-sea ecosystems

    OpenAIRE

    Tecchio, S.; Coll, Marta; Sarda, F.

    2015-01-01

    Environmental stressors, such as climate fluctuations, and anthropogenic stressors, such as fishing, are of major concern for the management of deep-sea ecosystems. Deep-water habitats are limited by primary productivity and are mainly dependent on the vertical input of organic matter from the surface. Global change over the latest decades is imparting variations in primary productivity levels across oceans, and thus it has an impact on the amount of organic matter landing on the deep seafloo...

  4. Seawater Carbonate Chemistry of Deep-sea Coral Beds off the Northwestern Hawaiian Islands

    Science.gov (United States)

    Brooks, J.; Shamberger, K.; Roark, E. B.; Miller, K.; Baco-Taylor, A.

    2016-02-01

    Many species of deep-sea octocorals produce calcium carbonate (CaCO3) skeletons and form coral beds that support diverse ecosystems crucial to fisheries. The geochemistry of deep-sea coral skeletons can provide valuable paleoceanographic information on ocean circulation and nutrient cycling. Deep-sea corals in the older bottom waters of the Pacific are naturally exposed to higher carbon dioxide (CO2) concentrations and lower pH than in the Atlantic where much of the previous deep-sea coral work has occurred. Therefore, some Pacific deep-sea corals may live and calcify in waters that are corrosive to their skeletons, but there have been few current seawater carbonate chemistry measurements of the waters surrounding deep-sea coral beds to assess this. The input of anthropogenic atmospheric CO2 known as ocean acidification (OA) lowers ocean pH and causes an expansion of these corrosive waters. Seawater carbonate chemistry must be characterized before accurate predictions can be made for the effects of OA on these important ecosystems. Total Alkalinity (TA) and Dissolved Inorganic Carbon (DIC) samples were collected in the fall of 2014 and 2015 from the surface to 1450 m depth off the Northwestern Hawaiian Island chain where deep-sea octocorals are found. The partial pressure of CO2 increased and pH, calcite saturation state (Ωca) and aragonite saturation state (Ωar) decreased with increasing latitude and depth. Notably, waters were undersaturated with respect to calcite and aragonite (Ωca and Ωar less than 1) below 800 m and 500 m, respectively. Therefore, deep-sea corals below these depths must calcify in waters that are thermodynamically favorable for CaCO3 dissolution. How deep-sea octocorals cope with such adverse seawater chemistry is critical to understanding future effects of OA. It is not known whether OA is currently negatively impacting deep-sea octocorals, but their naturally acidified environments could make them particularly susceptible to OA.

  5. Ventilation of the deep Greenland and Norwegian seas: evidence from krypton-85, tritium, carbon-14 and argon-39

    International Nuclear Information System (INIS)

    Smethie, W.M. Jr.; Ostlund, H.G.; Loosli, H.H.

    1986-01-01

    On leg 5 of the TTO expedition, the distributions of 85 Kr, tritium, 14 C, 39 Ar, temperature, salinity, oxygen, carbon dioxide and nutrients were measured in the Greenland and Norwegian seas. These observations support previous observations that Greenland Sea Deep Water is formed by a deep convective process within the Greenland gyre. They also support AAGAARD et al.'s (1985, Journal of Geophysical Research, 90, 4833-4846) new hypothesis that Norwegian Sea Deep Water forms from a mixture of Greenland Sea Deep Water and Eurasian Basin Deep Water. Volume transports estimated from the distributions of 85 Kr, tritium, 14 C and 39 Ar range from 0.53 to 0.74 Sv for exchange between the surface and deep Greenland Sea and from 0.9 to 1.47 Sv for exchange between the deep Greenland and deep Norwegian Seas. The residence time of water and the deep Greenland Sea with respect to exchange with surface water ranges from 24 to 34 years reported by PETERSON and ROOTH (1976, Deep-Sea Research, 23, 273-283) and 35-42 years reported by BULLISTER and WEISS (1983, Science, 221, 265-268). The residence time of water in the deep Norwegian Sea with respect to exchange with the deep Greenland Sea ranges from 19 to 30 years compared to 97-107 years reported by PETERSON and ROOTH (1976) and 10-28 years reported by BULLISTER and WEISS (1983). The oxygen consumption rate was estimated to be at most 1.04 μM kg -1 y -1 for the deep Greenland Sea and to be between 0.47 and 0.79 μM kg -1 y -1 for the deep Norwegian Sea. (author)

  6. Distinctive Microbial Community Structure in Highly Stratified Deep-Sea Brine Water Columns

    KAUST Repository

    Bougouffa, Salim; Yang, J. K.; Lee, O. O.; Wang, Y.; Batang, Zenon B.; Al-Suwailem, Abdulaziz M.; Qian, P. Y.

    2013-01-01

    Atlantis II and Discovery are two hydrothermal and hypersaline deep-sea pools in the Red Sea rift that are characterized by strong thermohalo-stratification and temperatures steadily peaking near the bottom. We conducted comprehensive vertical profiling of the microbial populations in both pools and highlighted the influential environmental factors. Pyrosequencing of the 16S rRNA genes revealed shifts in community structures vis-à-vis depth. High diversity and low abundance were features of the deepest convective layers despite the low cell density. Surprisingly, the brine interfaces had significantly higher cell counts than the overlying deep-sea water, yet they were lowest in diversity. Vertical stratification of the bacterial populations was apparent as we moved from the Alphaproteobacteria-dominated deep sea to the Planctomycetaceae- or Deferribacteres-dominated interfaces to the Gammaproteobacteria-dominated brine layers. Archaeal marine group I was dominant in the deep-sea water and interfaces, while several euryarchaeotic groups increased in the brine. Across sites, microbial phylotypes and abundances varied substantially in the brine interface of Discovery compared with Atlantis II, despite the near-identical populations in the overlying deep-sea waters. The lowest convective layers harbored interestingly similar microbial communities, even though temperature and heavy metal concentrations were very different. Multivariate analysis indicated that temperature and salinity were the major influences shaping the communities. The harsh conditions and the low-abundance phylotypes could explain the observed correlation in the brine pools.

  7. Distinctive Microbial Community Structure in Highly Stratified Deep-Sea Brine Water Columns

    KAUST Repository

    Bougouffa, Salim

    2013-03-29

    Atlantis II and Discovery are two hydrothermal and hypersaline deep-sea pools in the Red Sea rift that are characterized by strong thermohalo-stratification and temperatures steadily peaking near the bottom. We conducted comprehensive vertical profiling of the microbial populations in both pools and highlighted the influential environmental factors. Pyrosequencing of the 16S rRNA genes revealed shifts in community structures vis-à-vis depth. High diversity and low abundance were features of the deepest convective layers despite the low cell density. Surprisingly, the brine interfaces had significantly higher cell counts than the overlying deep-sea water, yet they were lowest in diversity. Vertical stratification of the bacterial populations was apparent as we moved from the Alphaproteobacteria-dominated deep sea to the Planctomycetaceae- or Deferribacteres-dominated interfaces to the Gammaproteobacteria-dominated brine layers. Archaeal marine group I was dominant in the deep-sea water and interfaces, while several euryarchaeotic groups increased in the brine. Across sites, microbial phylotypes and abundances varied substantially in the brine interface of Discovery compared with Atlantis II, despite the near-identical populations in the overlying deep-sea waters. The lowest convective layers harbored interestingly similar microbial communities, even though temperature and heavy metal concentrations were very different. Multivariate analysis indicated that temperature and salinity were the major influences shaping the communities. The harsh conditions and the low-abundance phylotypes could explain the observed correlation in the brine pools.

  8. Genetic diversity of archaea in deep-sea hydrothermal vent environments.

    Science.gov (United States)

    Takai, K; Horikoshi, K

    1999-08-01

    Molecular phylogenetic analysis of naturally occurring archaeal communities in deep-sea hydrothermal vent environments was carried out by PCR-mediated small subunit rRNA gene (SSU rDNA) sequencing. As determined through partial sequencing of rDNA clones amplified with archaea-specific primers, the archaeal populations in deep-sea hydrothermal vent environments showed a great genetic diversity, and most members of these populations appeared to be uncultivated and unidentified organisms. In the phylogenetic analysis, a number of rDNA sequences obtained from deep-sea hydrothermal vents were placed in deep lineages of the crenarchaeotic phylum prior to the divergence of cultivated thermophilic members of the crenarchaeota or between thermophilic members of the euryarchaeota and members of the methanogen-halophile clade. Whole cell in situ hybridization analysis suggested that some microorganisms of novel phylotypes predicted by molecular phylogenetic analysis were likely present in deep-sea hydrothermal vent environments. These findings expand our view of the genetic diversity of archaea in deep-sea hydrothermal vent environments and of the phylogenetic organization of archaea.

  9. Reconciling the sea level record of the last deglaciation with the δ18O spectra from deep sea cores

    International Nuclear Information System (INIS)

    Bard, Edouard; Columbia Univ., Palisades, NY; Arnold, Maurice; Duplessy, J.-C.

    1991-01-01

    In this paper we use the oxygen isotope record as a transient tracer to study palaeoceanography during the last deglaciation. By using 14 C and 18 O data obtained on four deep sea sediment cores, we show the presence of a measurable lag between the deglacial δ 18 O signal observed in the deep Atlantic and the deep Indo-Pacific oceans. Our study confirms that the major meltwater discharge occurred via the North Atlantic and that the thermohaline circulation was operating during the deglacial transition. (Author)

  10. Stakeholder perspectives on the importance of rare-species research for deep-sea environmental management

    Science.gov (United States)

    Turner, Phillip J.; Campbell, Lisa M.; Van Dover, Cindy L.

    2017-07-01

    The apparent prevalence of rare species (rarity) in the deep sea is a concern for environmental management and conservation of biodiversity. Rare species are often considered at risk of extinction and, in terrestrial and shallow water environments, have been shown to play key roles within an ecosystem. In the deep-sea environment, current research focuses primarily on abundant species and deep-sea stakeholders are questioning the importance of rare species in ecosystem functioning. This study asks whether deep-sea stakeholders (primarily scientists) view rare-species research as a priority in guiding environmental management. Delphi methodology (i.e., an iterative survey approach) was used to understand views about whether or not 'deep-sea scientists should allocate more resources to research on rare species in the deep sea, even if this means less resources might be available for abundant-species research.' Results suggest little consensus regarding the prioritization of resources for rare-species research. From Survey 1 to Survey 3, the average participant response shifted toward a view that rare-species research is not a priority if it comes at a cost to research on abundant species. Participants pointed to the need for a balanced approach and highlighted knowledge gaps about even the most fundamental questions, including whether rare species are truly 'rare' or simply under-sampled. Participants emphasized the lack of basic biological knowledge for rare and abundant species, particularly abundant meio- and microscopic species, as well as uncertainty in the roles rare and abundant species play in ecosystem processes. Approaches that jointly consider the role of rare and abundant species in ecosystem functioning (e.g., biological trait analysis) may help to clarify the extent to which rare species need to be incorporated into deep-sea environment management in order to maintain ecosystem functioning.

  11. Bacterial diversity and biogeography in deep-sea sediments of the South Atlantic Ocean

    DEFF Research Database (Denmark)

    Schauer, Regina; Bienhold, Christina; Ramette, Alban

    2010-01-01

    in 1051 sequences. Phylotypes affiliated with Gammaproteobacteria, Deltaproteobacteria and Acidobacteria were present in all three basins. The distribution of these shared phylotypes seemed to be influenced neither by the Walvis Ridge nor by different deep water masses, suggesting a high dispersal......Microbial biogeographic patterns in the deep sea depend on the ability of microorganisms to disperse. One possible limitation to microbial dispersal may be the Walvis Ridge that separates the Antarctic Lower Circumpolar Deep Water from the North Atlantic Deep Water. We examined bacterial...... communities in three basins of the eastern South Atlantic Ocean to determine diversity and biogeography of bacterial communities in deep-sea surface sediments. The analysis of 16S ribosomal RNA (rRNA) gene clone libraries in each basin revealed a high diversity, representing 521 phylotypes with 98% identity...

  12. A Deep Hydrographic Section Across the Tasman Sea.

    Science.gov (United States)

    1985-09-01

    the same cruise, TC1, as that on which the magneto- telluric moorings (plus a RANRL recording current-meter) were deployed. A small number of deep...that of Wyrtki (1961) who described the different water masses of this area and the northward movement of deep waters from Antarctica. Boland and

  13. Sources of the deep water masses in the northern Red Sea

    OpenAIRE

    Said, M.A.

    1998-01-01

    The hydrographic structure of the northern Red Sea indicated that, the surface waters of temperature around 22°C, salinity of 40.1OO%o and dt = 28.1 might sink to depths between 400-500 m by convective overturn, contributing to the formation of the mid-deep Red Sea waters. Below the 500 db depth down to the bottom the water column is stable. The geostrophic circulation clearly indicated an inflow of water from the Red Sea towards NNW, along the main axis of the sea. Arriving at the nort...

  14. Effects of hydrostatic pressure on yeasts isolated from deep-sea hydrothermal vents.

    Science.gov (United States)

    Burgaud, Gaëtan; Hué, Nguyen Thi Minh; Arzur, Danielle; Coton, Monika; Perrier-Cornet, Jean-Marie; Jebbar, Mohamed; Barbier, Georges

    2015-11-01

    Hydrostatic pressure plays a significant role in the distribution of life in the biosphere. Knowledge of deep-sea piezotolerant and (hyper)piezophilic bacteria and archaea diversity has been well documented, along with their specific adaptations to cope with high hydrostatic pressure (HHP). Recent investigations of deep-sea microbial community compositions have shown unexpected micro-eukaryotic communities, mainly dominated by fungi. Molecular methods such as next-generation sequencing have been used for SSU rRNA gene sequencing to reveal fungal taxa. Currently, a difficult but fascinating challenge for marine mycologists is to create deep-sea marine fungus culture collections and assess their ability to cope with pressure. Indeed, although there is no universal genetic marker for piezoresistance, physiological analyses provide concrete relevant data for estimating their adaptations and understanding the role of fungal communities in the abyss. The present study investigated morphological and physiological responses of fungi to HHP using a collection of deep-sea yeasts as a model. The aim was to determine whether deep-sea yeasts were able to tolerate different HHP and if they were metabolically active. Here we report an unexpected taxonomic-based dichotomic response to pressure with piezosensitve ascomycetes and piezotolerant basidiomycetes, and distinct morphological switches triggered by pressure for certain strains. Copyright © 2015 Institut Pasteur. Published by Elsevier Masson SAS. All rights reserved.

  15. Cosmopolitanism and Biogeography of the Genus Manganonema (Nematoda: Monhysterida in the Deep Sea

    Directory of Open Access Journals (Sweden)

    Roberto Danovaro

    2011-09-01

    Full Text Available Spatial patterns of species diversity provide information about the mechanisms that regulate biodiversity and are important for setting conservation priorities. Present knowledge of the biogeography of meiofauna in the deep sea is scarce. This investigation focuses on the distribution of the deep-sea nematode genus Manganonema, which is typically extremely rare in deep-sea sediment samples. Forty-four specimens of eight different species of this genus were recorded from different Atlantic and Mediterranean regions. Four out of the eight species encountered are new to science. We report here that this genus is widespread both in the Atlantic and in the Mediterranean Sea. These new findings together with literature information indicate that Manganonema is a cosmopolitan genus, inhabiting a variety of deep-sea habitats and oceans. Manganonema shows the highest diversity at water depths >4,000 m. Our data, therefore, indicate that this is preferentially an abyssal genus that is able, at the same time, to colonize specific habitats at depths shallower than 1,000 m. The analysis of the distribution of the genus Manganonema indicates the presence of large differences in dispersal strategies among different species, ranging from locally endemic to cosmopolitan. Lacking meroplanktonic larvae and having limited dispersal ability due to their small size, it has been hypothesized that nematodes have limited dispersal potential. However, the investigated deep-sea nematodes were present across different oceans covering macro-scale distances. Among the possible explanations (hydrological conditions, geographical and geological pathways, long-term processes, specific historical events, their apparent preference of colonizing highly hydrodynamic systems, could suggest that these infaunal organisms are transported by means of deep-sea benthic storms and turbidity currents over long distances.

  16. Unexpected Positive Buoyancy in Deep Sea Sharks, Hexanchus griseus, and a Echinorhinus cookei.

    Directory of Open Access Journals (Sweden)

    Itsumi Nakamura

    Full Text Available We do not expect non air-breathing aquatic animals to exhibit positive buoyancy. Sharks, for example, rely on oil-filled livers instead of gas-filled swim bladders to increase their buoyancy, but are nonetheless ubiquitously regarded as either negatively or neutrally buoyant. Deep-sea sharks have particularly large, oil-filled livers, and are believed to be neutrally buoyant in their natural habitat, but this has never been confirmed. To empirically determine the buoyancy status of two species of deep-sea sharks (bluntnose sixgill sharks, Hexanchus griseus, and a prickly shark, Echinorhinus cookei in their natural habitat, we used accelerometer-magnetometer data loggers to measure their swimming performance. Both species of deep-sea sharks showed similar diel vertical migrations: they swam at depths of 200-300 m at night and deeper than 500 m during the day. Ambient water temperature was around 15°C at 200-300 m but below 7°C at depths greater than 500 m. During vertical movements, all deep-sea sharks showed higher swimming efforts during descent than ascent to maintain a given swimming speed, and were able to glide uphill for extended periods (several minutes, indicating that these deep-sea sharks are in fact positively buoyant in their natural habitats. This positive buoyancy may adaptive for stealthy hunting (i.e. upward gliding to surprise prey from underneath or may facilitate evening upward migrations when muscle temperatures are coolest, and swimming most sluggish, after spending the day in deep, cold water. Positive buoyancy could potentially be widespread in fish conducting daily vertical migration in deep-sea habitats.

  17. Impact of Deepwater Horizon Spill on food supply to deep-sea benthos communities

    Science.gov (United States)

    Prouty, Nancy G.; Swarzenski, Pamela; Mienis, Furu; Duineveld, Gerald; Demopoulos, Amanda W.J.; Ross, Steve W.; Brooke, Sandra

    2016-01-01

    Deep-sea ecosystems encompass unique and often fragile communities that are sensitive to a variety of anthropogenic and natural impacts. After the 2010 Deepwater Horizon (DWH) oil spill, sampling efforts documented the acute impact of the spill on some deep-sea coral colonies. To investigate the impact of the DWH spill on quality and quantity of biomass delivered to the deep-sea, a suite of geochemical tracers (e.g., stable and radio-isotopes, lipid biomarkers, and compound specific isotopes) was measured from monthly sediment trap samples deployed near a high-density deep-coral site in the Viosca Knoll area of the north-central Gulf of Mexico prior to (Oct-2008 to Sept-2009) and after the spill (Oct-10 to Sept-11). Marine (e.g., autochthonous) sources of organic matter dominated the sediment traps in both years, however after the spill, there was a pronounced reduction in marinesourced OM, including a reduction in marine-sourced sterols and n-alkanes and a concomitant decrease in sediment trap organic carbon and pigment flux. Results from this study indicate a reduction in primary production and carbon export to the deep-sea in 2010-2011, at least 6-18 months after the spill started. Whereas satellite observations indicate an initial increase in phytoplankton biomass, results from this sediment trap study define a reduction in primary production and carbon export to the deep-sea community. In addition, a dilution from a low-14C carbon source (e.g., petrocarbon) was detected in the sediment trap samples after the spill, in conjunction with a change in the petrogenic composition. The data presented here fills a critical gap in our knowledge of biogeochemical processes and sub-acute impacts to the deep-sea that ensued after the 2010 DWH spill.

  18. Unexpected Positive Buoyancy in Deep Sea Sharks, Hexanchus griseus, and a Echinorhinus cookei.

    Science.gov (United States)

    Nakamura, Itsumi; Meyer, Carl G; Sato, Katsufumi

    2015-01-01

    We do not expect non air-breathing aquatic animals to exhibit positive buoyancy. Sharks, for example, rely on oil-filled livers instead of gas-filled swim bladders to increase their buoyancy, but are nonetheless ubiquitously regarded as either negatively or neutrally buoyant. Deep-sea sharks have particularly large, oil-filled livers, and are believed to be neutrally buoyant in their natural habitat, but this has never been confirmed. To empirically determine the buoyancy status of two species of deep-sea sharks (bluntnose sixgill sharks, Hexanchus griseus, and a prickly shark, Echinorhinus cookei) in their natural habitat, we used accelerometer-magnetometer data loggers to measure their swimming performance. Both species of deep-sea sharks showed similar diel vertical migrations: they swam at depths of 200-300 m at night and deeper than 500 m during the day. Ambient water temperature was around 15°C at 200-300 m but below 7°C at depths greater than 500 m. During vertical movements, all deep-sea sharks showed higher swimming efforts during descent than ascent to maintain a given swimming speed, and were able to glide uphill for extended periods (several minutes), indicating that these deep-sea sharks are in fact positively buoyant in their natural habitats. This positive buoyancy may adaptive for stealthy hunting (i.e. upward gliding to surprise prey from underneath) or may facilitate evening upward migrations when muscle temperatures are coolest, and swimming most sluggish, after spending the day in deep, cold water. Positive buoyancy could potentially be widespread in fish conducting daily vertical migration in deep-sea habitats.

  19. Deep-sea environment and biodiversity of the West African Equatorial margin

    Science.gov (United States)

    Sibuet, Myriam; Vangriesheim, Annick

    2009-12-01

    The long-term BIOZAIRE multidisciplinary deep-sea environmental program on the West Equatorial African margin organized in partnership between Ifremer and TOTAL aimed at characterizing the benthic community structure in relation with physical and chemical processes in a region of oil and gas interest. The morphology of the deep Congo submarine channel and the sedimentological structures of the deep-sea fan were established during the geological ZAIANGO project and helped to select study sites ranging from 350 to 4800 m water depth inside or near the channel and away from its influence. Ifremer conducted eight deep-sea cruises on board research vessels between 2000 and 2005. Standardized methods of sampling together with new technologies such as the ROV Victor 6000 and its associated instrumentation were used to investigate this poorly known continental margin. In addition to the study of sedimentary environments more or less influenced by turbidity events, the discovery of one of the largest cold seeps near the Congo channel and deep coral reefs extends our knowledge of the different habitats of this margin. This paper presents the background, objectives and major results of the BIOZAIRE Program. It highlights the work achieved in the 16 papers in this special issue. This synthesis paper describes the knowledge acquired at a regional and local scale of the Equatorial East Atlantic margin, and tackles new interdisciplinary questions to be answered in the various domains of physics, chemistry, taxonomy and ecology to better understand the deep-sea environment in the Gulf of Guinea.

  20. The Age of Human-Robot Collaboration: Deep Sea Exploration

    KAUST Repository

    Khatib, Oussama

    2018-01-01

    The promise of oceanic discovery has intrigued scientists and explorers for centuries, whether to study underwater ecology and climate change, or to uncover natural resources and historic secrets buried deep at archaeological sites. Reaching

  1. Factors governing the deep ventilation of the Red Sea

    KAUST Repository

    Papadopoulos, Vassilis P.; Zhan, Peng; Sofianos, Sarantis S.; Raitsos, Dionysios E.; Qurban, Mohammed; Abualnaja, Yasser; Bower, Amy; Kontoyiannis, Harilaos; Pavlidou, Alexandra; Asharaf T.T., Mohamed; Zarokanellos, Nikolaos; Hoteit, Ibrahim

    2015-01-01

    A variety of data based on hydrographic measurements, satellite observations, reanalysis databases, and meteorological observations are used to explore the interannual variability and factors governing the deep water formation in the northern Red

  2. An oceanographic model for the dispersion of wastes disposed of in the deep sea

    International Nuclear Information System (INIS)

    1983-06-01

    The report presents results of IMO/FAO/UNESCO/WMO/WHO/IAEA/UN/UNEP joint group of experts on the scientific aspects of marine pollution (GESAMP) to provide advice on the most suitable oceanographic modelling techniques to be applied to the deep-sea dumping of both radioactive and non-radioactive substances. There are four main parts of the work: the present knowledge of oceanic processes that may transfer substances from a deep-sea dump site back to man or his food chain, methods and models presently available for estimating or calculating concentration distributions of contaminants arising from releases from deep-sea dump sites and recommendations as to the presently most appropriate models, the reliability of the concentration distributions obtained using these models and recommended areas for further improvements including research needs

  3. Microbial gene functions enriched in the Deepwater Horizon deep-sea oil plume

    Energy Technology Data Exchange (ETDEWEB)

    Lu, Z.; Deng, Y.; Nostrand, J.D. Van; He, Z.; Voordeckers, J.; Zhou, A.; Lee, Y.-J.; Mason, O.U.; Dubinsky, E.; Chavarria, K.; Tom, L.; Fortney, J.; Lamendella, R.; Jansson, J.K.; D?haeseleer, P.; Hazen, T.C.; Zhou, J.

    2011-06-15

    The Deepwater Horizon oil spill in the Gulf of Mexico is the deepest and largest offshore spill in U.S. history and its impacts on marine ecosystems are largely unknown. Here, we showed that the microbial community functional composition and structure were dramatically altered in a deep-sea oil plume resulting from the spill. A variety of metabolic genes involved in both aerobic and anaerobic hydrocarbon degradation were highly enriched in the plume compared to outside the plume, indicating a great potential for intrinsic bioremediation or natural attenuation in the deep-sea. Various other microbial functional genes relevant to carbon, nitrogen, phosphorus, sulfur and iron cycling, metal resistance, and bacteriophage replication were also enriched in the plume. Together, these results suggest that the indigenous marine microbial communities could play a significant role in biodegradation of oil spills in deep-sea environments.

  4. Molecular analyses reveal high levels of eukaryotic richness associated with enigmatic deep-sea protists (Komokiacea)

    DEFF Research Database (Denmark)

    Lecroq, Beatrice; Gooday, Andrew John; Cedhagen, Tomas

    2009-01-01

    Komokiaceans are testate agglutinated protists, extremely diverse and abundant in the deep sea. About 40 species are described and share the same main morpholog- ical feature: a test consisting of narrow branching tubules forming a complex system. In some species, the interstices between the tubu......Komokiaceans are testate agglutinated protists, extremely diverse and abundant in the deep sea. About 40 species are described and share the same main morpholog- ical feature: a test consisting of narrow branching tubules forming a complex system. In some species, the interstices between...... suggest strongly that komokiaceans, and probably many other large testate protists, provide a habitat structure for a large spectrum of eukaryotes, significantly contributing to maintaining the biodiversity of micro- and meiofaunal communities in the deep sea....

  5. Sedimentologic and volcanologic investigation of the deep tyrrhenian sea: preliminary result of cruise VST02

    Directory of Open Access Journals (Sweden)

    A. Bertagnini

    2006-06-01

    Full Text Available The VST02 cruise carried out in the summer of 2002 was focused at sedimentologic and volcanologic researches over selected areas of the deep portion of the Tyrrhenian sea. Chirp lines and seafloor samples were collected from the Calabrian slope surrounding Stromboli island, in the Marsili deep sea fan, in the Vavilov basin and in the Vavilov seamount. Submarine volcanic activity, both explosive and effusive, is occuring in the Stromboli edifice. Explosive submarine volcanism affects also the shallowest areas of the Vavilov seamount. Submarine carbonate lithification has been observed on the sediment-starved flanks of the Vavilov seamount. Acoustic transparent layers make up the recentmost infill of the Gortani basin, the easternmost portion of the Vavilov basin. Channels comprised of a variety of architectural elements and depositional lobes are the main elements of the Marsili deep-sea fan where, apparently, sedimentation occurs mainly through debris flow processes.

  6. First Insights into the Viral Communities of the Deep-sea Anoxic Brines of the Red Sea.

    Science.gov (United States)

    Antunes, André; Alam, Intikhab; Simões, Marta Filipa; Daniels, Camille; Ferreira, Ari J S; Siam, Rania; El-Dorry, Hamza; Bajic, Vladimir B

    2015-10-01

    The deep-sea brines of the Red Sea include some of the most extreme and unique environments on Earth. They combine high salinities with increases in temperature, heavy metals, hydrostatic pressure, and anoxic conditions, creating unique settings for thriving populations of novel extremophiles. Despite a recent increase of studies focusing on these unusual biotopes, their viral communities remain unexplored. The current survey explores four metagenomic datasets obtained from different brine-seawater interface samples, focusing specifically on the diversity of their viral communities. Data analysis confirmed that the particle-attached viral communities present in the brine-seawater interfaces were diverse and generally dominated by Caudovirales, yet appearing distinct from sample to sample. With a level of caution, we report the unexpected finding of Phycodnaviridae, which infects algae and plants, and trace amounts of insect-infecting Iridoviridae. Results from Kebrit Deep revealed stratification in the viral communities present in the interface: the upper-interface was enriched with viruses associated with typical marine bacteria, while the lower-interface was enriched with haloviruses and halophages. These results provide first insights into the unexplored viral communities present in deep-sea brines of the Red Sea, representing one of the first steps for ongoing and future sampling efforts and studies. Copyright © 2015 The Authors. Production and hosting by Elsevier Ltd.. All rights reserved.

  7. First Insights into the Viral Communities of the Deep-sea Anoxic Brines of the Red Sea

    KAUST Repository

    Antunes, Andre; Alam, Intikhab; Simoes, Marta; Daniels, Camille Arian; Ferreira, Ari J.S.; Siam, Rania; El-Dorry, Hamza; Bajic, Vladimir B.

    2015-01-01

    The deep-sea brines of the Red Sea include some of the most extreme and unique environments on Earth. They combine high salinities with increases in temperature, heavy metals, hydrostatic pressure, and anoxic conditions, creating unique settings for thriving populations of novel extremophiles. Despite a recent increase of studies focusing on these unusual biotopes, their viral communities remain unexplored. The current survey explores four metagenomic datasets obtained from different brine-seawater interface samples, focusing specifically on the diversity of their viral communities. Data analysis confirmed that the particle-attached viral communities present in the brine-seawater interfaces were diverse and generally dominated by Caudovirales, yet appearing distinct from sample to sample. With a level of caution, we report the unexpected finding of Phycodnaviridae, which infects algae and plants, and trace amounts of insect-infecting Iridoviridae. Results from Kebrit Deep revealed stratification in the viral communities present in the interface: the upper-interface was enriched with viruses associated with typical marine bacteria, while the lower-interface was enriched with haloviruses and halophages. These results provide first insights into the unexplored viral communities present in deep-sea brines of the Red Sea, representing one of the first steps for ongoing and future sampling efforts and studies.

  8. First Insights into the Viral Communities of the Deep-sea Anoxic Brines of the Red Sea

    KAUST Repository

    Antunes, Andre

    2015-10-31

    The deep-sea brines of the Red Sea include some of the most extreme and unique environments on Earth. They combine high salinities with increases in temperature, heavy metals, hydrostatic pressure, and anoxic conditions, creating unique settings for thriving populations of novel extremophiles. Despite a recent increase of studies focusing on these unusual biotopes, their viral communities remain unexplored. The current survey explores four metagenomic datasets obtained from different brine-seawater interface samples, focusing specifically on the diversity of their viral communities. Data analysis confirmed that the particle-attached viral communities present in the brine-seawater interfaces were diverse and generally dominated by Caudovirales, yet appearing distinct from sample to sample. With a level of caution, we report the unexpected finding of Phycodnaviridae, which infects algae and plants, and trace amounts of insect-infecting Iridoviridae. Results from Kebrit Deep revealed stratification in the viral communities present in the interface: the upper-interface was enriched with viruses associated with typical marine bacteria, while the lower-interface was enriched with haloviruses and halophages. These results provide first insights into the unexplored viral communities present in deep-sea brines of the Red Sea, representing one of the first steps for ongoing and future sampling efforts and studies.

  9. Invertebrate population genetics across Earth's largest habitat: The deep-sea floor.

    Science.gov (United States)

    Taylor, M L; Roterman, C N

    2017-10-01

    Despite the deep sea being the largest habitat on Earth, there are just 77 population genetic studies of invertebrates (115 species) inhabiting non-chemosynthetic ecosystems on the deep-sea floor (below 200 m depth). We review and synthesize the results of these papers. Studies reveal levels of genetic diversity comparable to shallow-water species. Generally, populations at similar depths were well connected over 100s-1,000s km, but studies that sampled across depth ranges reveal population structure at much smaller scales (100s-1,000s m) consistent with isolation by adaptation across environmental gradients, or the existence of physical barriers to connectivity with depth. Few studies were ocean-wide (under 4%), and 48% were Atlantic-focused. There is strong emphasis on megafauna and commercial species with research into meiofauna, "ecosystem engineers" and other ecologically important species lacking. Only nine papers account for ~50% of the planet's surface (depths below 3,500 m). Just two species were studied below 5,000 m, a quarter of Earth's seafloor. Most studies used single-locus mitochondrial genes revealing a common pattern of non-neutrality, consistent with demographic instability or selective sweeps; similar to deep-sea hydrothermal vent fauna. The absence of a clear difference between vent and non-vent could signify that demographic instability is common in the deep sea, or that selective sweeps render single-locus mitochondrial studies demographically uninformative. The number of population genetics studies to date is miniscule in relation to the size of the deep sea. The paucity of studies constrains meta-analyses where broad inferences about deep-sea ecology could be made. © 2017 The Authors. Molecular Ecology Published by John Wiley & Sons Ltd.

  10. Application of Low cost Spirulina growth medium using Deep sea water

    Science.gov (United States)

    Lim, Dae-hack; Kim, Bong-ju; Lee, Sung-jae; Choi, Nag-chul; Park, Cheon-young

    2017-04-01

    Deep-sea water has a relatively constant temperature, abundant nutrients such as calcium, magnesium, nitrates, and phosphates, etc., and stable water quality, even though there might be some variations of their compositions according to collection places. Thus, deep-sea water would be a good substrate for algal growth and biomass production since it contains various nutrients, including a fluorescent red pigment, and β-carotene, etc. The aim of this study was to investigate the economics of a culture condition through comparative analysis to Spirulina platensis growth characteristic under various medium conditions for cost-effective production of Spirulina sp.. Growth experiments were performed with S. platensis under various culture medium conditions (deep sea water + SP medium). Growth tests for culture medium demonstrated that the deep sea water to SP medium ratio of 50:50(W/W) was effective in S. platensis with the maximum biomass (1.35g/L) and minimum medium making cost per production mass (133.28 KRW/g). Parameter estimation of bio-kinetics (maximum growth rate and yield) for low cost medium results showed that the maximum growth rate and yield of N, P, K were obtained under deep sea water to SP medium ratio of 50:50(W/W) of 0.057 1/day and 0.151, 0.076, 0.123, respectively. Acknowledgment : "This research was a part of the project titled 'Development of microalgae culture technique for cosmetic materials based on ocean deep sea water(20160297)', funded by the Ministry of Oceans and Fisheries, Korea."

  11. Predicted deep-sea coral habitat suitability for the U.S. West coast.

    Directory of Open Access Journals (Sweden)

    John M Guinotte

    Full Text Available Regional scale habitat suitability models provide finer scale resolution and more focused predictions of where organisms may occur. Previous modelling approaches have focused primarily on local and/or global scales, while regional scale models have been relatively few. In this study, regional scale predictive habitat models are presented for deep-sea corals for the U.S. West Coast (California, Oregon and Washington. Model results are intended to aid in future research or mapping efforts and to assess potential coral habitat suitability both within and outside existing bottom trawl closures (i.e. Essential Fish Habitat (EFH and identify suitable habitat within U.S. National Marine Sanctuaries (NMS. Deep-sea coral habitat suitability was modelled at 500 m×500 m spatial resolution using a range of physical, chemical and environmental variables known or thought to influence the distribution of deep-sea corals. Using a spatial partitioning cross-validation approach, maximum entropy models identified slope, temperature, salinity and depth as important predictors for most deep-sea coral taxa. Large areas of highly suitable deep-sea coral habitat were predicted both within and outside of existing bottom trawl closures and NMS boundaries. Predicted habitat suitability over regional scales are not currently able to identify coral areas with pin point accuracy and probably overpredict actual coral distribution due to model limitations and unincorporated variables (i.e. data on distribution of hard substrate that are known to limit their distribution. Predicted habitat results should be used in conjunction with multibeam bathymetry, geological mapping and other tools to guide future research efforts to areas with the highest probability of harboring deep-sea corals. Field validation of predicted habitat is needed to quantify model accuracy, particularly in areas that have not been sampled.

  12. Structure, functioning, and cumulative stressors of Mediterranean deep-sea ecosystems

    Science.gov (United States)

    Tecchio, Samuele; Coll, Marta; Sardà, Francisco

    2015-06-01

    Environmental stressors, such as climate fluctuations, and anthropogenic stressors, such as fishing, are of major concern for the management of deep-sea ecosystems. Deep-water habitats are limited by primary productivity and are mainly dependent on the vertical input of organic matter from the surface. Global change over the latest decades is imparting variations in primary productivity levels across oceans, and thus it has an impact on the amount of organic matter landing on the deep seafloor. In addition, anthropogenic impacts are now reaching the deep ocean. The Mediterranean Sea, the largest enclosed basin on the planet, is not an exception. However, ecosystem-level studies of response to varying food input and anthropogenic stressors on deep-sea ecosystems are still scant. We present here a comparative ecological network analysis of three food webs of the deep Mediterranean Sea, with contrasting trophic structure. After modelling the flows of these food webs with the Ecopath with Ecosim approach, we compared indicators of network structure and functioning. We then developed temporal dynamic simulations varying the organic matter input to evaluate its potential effect. Results show that, following the west-to-east gradient in the Mediterranean Sea of marine snow input, organic matter recycling increases, net production decreases to negative values and trophic organisation is overall reduced. The levels of food-web activity followed the gradient of organic matter availability at the seafloor, confirming that deep-water ecosystems directly depend on marine snow and are therefore influenced by variations of energy input, such as climate-driven changes. In addition, simulations of varying marine snow arrival at the seafloor, combined with the hypothesis of a possible fishery expansion on the lower continental slope in the western basin, evidence that the trawling fishery may pose an impact which could be an order of magnitude stronger than a climate

  13. The National Deep-Sea Coral and Sponge Database: A Comprehensive Resource for United States Deep-Sea Coral and Sponge Records

    Science.gov (United States)

    Dornback, M.; Hourigan, T.; Etnoyer, P.; McGuinn, R.; Cross, S. L.

    2014-12-01

    Research on deep-sea corals has expanded rapidly over the last two decades, as scientists began to realize their value as long-lived structural components of high biodiversity habitats and archives of environmental information. The NOAA Deep Sea Coral Research and Technology Program's National Database for Deep-Sea Corals and Sponges is a comprehensive resource for georeferenced data on these organisms in U.S. waters. The National Database currently includes more than 220,000 deep-sea coral records representing approximately 880 unique species. Database records from museum archives, commercial and scientific bycatch, and from journal publications provide baseline information with relatively coarse spatial resolution dating back as far as 1842. These data are complemented by modern, in-situ submersible observations with high spatial resolution, from surveys conducted by NOAA and NOAA partners. Management of high volumes of modern high-resolution observational data can be challenging. NOAA is working with our data partners to incorporate this occurrence data into the National Database, along with images and associated information related to geoposition, time, biology, taxonomy, environment, provenance, and accuracy. NOAA is also working to link associated datasets collected by our program's research, to properly archive them to the NOAA National Data Centers, to build a robust metadata record, and to establish a standard protocol to simplify the process. Access to the National Database is provided through an online mapping portal. The map displays point based records from the database. Records can be refined by taxon, region, time, and depth. The queries and extent used to view the map can also be used to download subsets of the database. The database, map, and website is already in use by NOAA, regional fishery management councils, and regional ocean planning bodies, but we envision it as a model that can expand to accommodate data on a global scale.

  14. Physiological effects of hypercapnia in the deep-sea bivalve Acesta excavata (Fabricius, 1779) (Bivalvia; Limidae)

    DEFF Research Database (Denmark)

    Hammer, Karen M.; Kristiansen, Erlend; Zachariassen, Karl Erik

    2011-01-01

    The option of storing CO(2) in subsea rock formations to mitigate future increases in atmospheric CO(2) may induce problems for animals in the deep sea. In the present study the deep-sea bivalve Acesta excavata was subjected to environmental hypercapnia (pHSW 6.35, P(CO2), =33,000 mu atm...... extracellular pH remained significantly lower during recovery. Intracellular non-bicarbonate buffering capacity of the posterior adductor muscle of hypercapnic animals was significantly lower than control values, but this was not the case for the remaining tissues analyzed. Oxygen consumption initially dropped...

  15. Monitoring the sedimentary carbon in an artificially disturbed deep-sea sedimentary environment

    Digital Repository Service at National Institute of Oceanography (India)

    Nath, B.N.; Khadge, N.H.; Nabar, S.; Raghukumar, C.; Ingole, B.S.; Valsangkar, A.B.; Sharma, R.; Srinivas, K.

    1 Author version: Environ. Monit. Assess., vol.184; 2012; 2829-2844 Monitoring the sedimentary carbon in an artificially disturbed deep-sea sedimentary environment B. Nagender Nath * , N.H. Khadge, Sapana Nabar, C. Raghu Kumar, B.S. Ingole... community two years after an artificial rapid deposition event. Publication of Seto Marine Biological Laboratory, 39(1), 17-27. Gage, J.D. (1978). Animals in deep-sea sediments. Proceedings of Royal Society of Edinburgh, 768, 77-93. Gage, J.D., & Tyler...

  16. Uptake and distribution of organo-iodine in deep-sea corals.

    Science.gov (United States)

    Prouty, Nancy G; Roark, E Brendan; Mohon, Leslye M; Chang, Ching-Chih

    2018-07-01

    Understanding iodine concentration, transport, and bioavailability is essential in evaluating iodine's impact to the environment and its effectiveness as an environmental biogeotracer. While iodine and its radionuclides have proven to be important tracers in geologic and biologic studies, little is known about transport of this element to the deep sea and subsequent uptake in deep-sea coral habitats. Results presented here on deep-sea black coral iodine speciation and iodine isotope variability provides key information on iodine behavior in natural and anthropogenic environments, and its geochemical pathway in the Gulf of Mexico. Organo-iodine is the dominant iodine species in the black corals, demonstrating that binding of iodine to organic matter plays an important role in the transport and transfer of iodine to the deep-sea corals. The identification of growth bands captured in high-resolution scanning electron images (SEM) with synchronous peaks in iodine variability suggest that riverine delivery of terrestrial-derived organo-iodine is the most plausible explanation to account for annual periodicity in the deep-sea coral geochemistry. Whereas previous studies have suggested the presence of annual growth rings in deep-sea corals, this present study provides a mechanism to explain the formation of annual growth bands. Furthermore, deep-sea coral ages based on iodine peak counts agree well with those ages derived from radiocarbon ( 14 C) measurements. These results hold promise for developing chronologies independent of 14 C dating, which is an essential component in constraining reservoir ages and using radiocarbon as a tracer of ocean circulation. Furthermore, the presence of enriched 129 I/ 127 I ratios during the most recent period of skeleton growth is linked to nuclear weapons testing during the 1960s. The sensitivity of the coral skeleton to record changes in surface water 129 I composition provides further evidence that iodine composition and isotope

  17. Uptake and distribution of organo-iodine in deep-sea corals

    Science.gov (United States)

    Prouty, Nancy G.; Roark, E. Brendan; Mohon, Leslye M.; Chang, Ching-Chih

    2018-01-01

    Understanding iodine concentration, transport, and bioavailability is essential in evaluating iodine's impact to the environment and its effectiveness as an environmental biogeotracer. While iodine and its radionuclides have proven to be important tracers in geologic and biologic studies, little is known about transport of this element to the deep sea and subsequent uptake in deep-sea coral habitats. Results presented here on deep-sea black coral iodine speciation and iodine isotope variability provides key information on iodine behavior in natural and anthropogenic environments, and its geochemical pathway in the Gulf of Mexico. Organo-iodine is the dominant iodine species in the black corals, demonstrating that binding of iodine to organic matter plays an important role in the transport and transfer of iodine to the deep-sea corals. The identification of growth bands captured in high-resolution scanning electron images (SEM) with synchronous peaks in iodine variability suggest that riverine delivery of terrestrial-derived organo-iodine is the most plausible explanation to account for annual periodicity in the deep-sea coral geochemistry. Whereas previous studies have suggested the presence of annual growth rings in deep-sea corals, this present study provides a mechanism to explain the formation of annual growth bands. Furthermore, deep-sea coral ages based on iodine peak counts agree well with those ages derived from radiocarbon (14C) measurements. These results hold promise for developing chronologies independent of 14C dating, which is an essential component in constraining reservoir ages and using radiocarbon as a tracer of ocean circulation. Furthermore, the presence of enriched 129I/127I ratios during the most recent period of skeleton growth is linked to nuclear weapons testing during the 1960s. The sensitivity of the coral skeleton to record changes in surface water 129I composition provides further evidence that iodine composition and isotope

  18. Biscogniauxone, a New Isopyrrolonaphthoquinone Compound from the Fungus Biscogniauxia mediterranea Isolated from Deep-Sea Sediments

    Directory of Open Access Journals (Sweden)

    Bin Wu

    2016-11-01

    Full Text Available The properties and the production of new metabolites from the fungal strain LF657 isolated from the Herodotes Deep (2800 m depth in the Mediterranean Sea are reported in this study. The new isolate was identified as Biscogniauxia mediterranea based on ITS1-5.8S-ITS2 and 28S rRNA gene sequences. A new isopyrrolonaphthoquinone with inhibitory activity against glycogen synthase kinase (GSK-3β was isolated from this fungus. This is the first report of this class of compounds from a fungus isolated from a deep-sea sediment, as well as from a Biscogniauxia species.

  19. Deep-Sea Mining With No Net Loss of Biodiversity—An Impossible Aim

    Directory of Open Access Journals (Sweden)

    Holly J. Niner

    2018-03-01

    Full Text Available Deep-sea mining is likely to result in biodiversity loss, and the significance of this to ecosystem function is not known. “Out of kind” biodiversity offsets substituting one ecosystem type (e.g., coral reefs for another (e.g., abyssal nodule fields have been proposed to compensate for such loss. Here we consider a goal of no net loss (NNL of biodiversity and explore the challenges of applying this aim to deep seabed mining, based on the associated mitigation hierarchy (avoid, minimize, remediate. We conclude that the industry cannot at present deliver an outcome of NNL. This results from the vulnerable nature of deep-sea environments to mining impacts, currently limited technological capacity to minimize harm, significant gaps in ecological knowledge, and uncertainties of recovery potential of deep-sea ecosystems. Avoidance and minimization of impacts are therefore the only presently viable means of reducing biodiversity losses from seabed mining. Because of these constraints, when and if deep-sea mining proceeds, it must be approached in a precautionary and step-wise manner to integrate new and developing knowledge. Each step should be subject to explicit environmental management goals, monitoring protocols, and binding standards to avoid serious environmental harm and minimize loss of biodiversity. “Out of kind” measures, an option for compensation currently proposed, cannot replicate biodiversity and ecosystem services lost through mining of the deep seabed and thus cannot be considered true offsets. The ecosystem functions provided by deep-sea biodiversity contribute to a wide range of provisioning services (e.g., the exploitation of fish, energy, pharmaceuticals, and cosmetics, play an essential role in regulatory services (e.g., carbon sequestration and are important culturally. The level of “acceptable” biodiversity loss in the deep sea requires public, transparent, and well-informed consideration, as well as wide agreement

  20. Velocity and Attenuation Profiles in the Monterey Deep-Sea Fan

    Science.gov (United States)

    1987-12-01

    a. 11 o n i n and depth. Sol ’^ a 11 e i"i u a 11 o >) a i::> 1 n Ci sediment for each of the f i...i. n c t ion o f f r e q u e n c; y...estimate of sea floor depth was obtained from an oceano - graphic map of the Monterey fan (’Oceanographic Data of the Monterey Deep Sea Fan’, 1st

  1. Deep-Diving California Sea Lions: Are They Pushing Their Physiological Limit

    Science.gov (United States)

    2015-09-30

    highly variable. Venous oxygen content can actually increase during short duration dives. This suggests very little muscle blood flow and evven the use...the sea lion, the emperor penguin (Aptenodytes forsteri), another animal that dives on inspiration with a large respiratory O2 store, also can...in deep-diving emperor penguins (Wright et al. 2014), and in deep-diving bottlenose dolphins (Tursiops truncatus), which also dive on inspiration

  2. Syllidae (Annelida: Phyllodocida) from the deep Mediterranean Sea, with the description of three new species.

    Science.gov (United States)

    Langeneck, Joachim; Musco, Luigi; Busoni, Giulio; Conese, Ilaria; Aliani, Stefano; Castelli, Alberto

    2018-01-03

    Despite almost two centuries of research, the diversity of Mediterranean deep-sea environments remain still largely unexplored. This is particularly true for the polychaete family Syllidae. We report herein 14 species; among them, we describe Erinaceusyllis barbarae n. sp., Exogone sophiae n. sp. and Prosphaerosyllis danovaroi n. sp. and report Parexogone wolfi San Martín, 1991, Exogone lopezi San Martín, Ceberio Aguirrezabalaga, 1996 and Anguillosyllis Day, 1963 for the first time from the Western Mediterranean, the latter based on a single individual likely belonging to an undescribed species. Moreover, we re-establish Syllis profunda Cognetti, 1955 based on type and new material. Present data, along with a critical analysis of available literature, show that Syllidae are highly diverse in deep Mediterranean environments, even though they are rarely reported, probably due to the scarce number of studies devoted to the size-fraction of benthos including deep-sea syllids. Most deep-sea Syllidae have wide distributions, which do not include shallow-waters. 100 m depth apparently represents the boundary between the assemblages dominated by generalist shallow water syllids like Exogone naidina Ørsted, 1843 and Syllis parapari San Martín López, 2000, and those deep-water assemblages characterised by strictly deep-water species like Parexogone campoyi San Martín, Ceberio Aguirrezabalaga, 1996, Parexogone wolfi San Martín, 1991 and Syllis sp. 1 (= Langerhansia caeca Katzmann, 1973).

  3. Uranium in Pacific Deep-Sea Sediments and Manganese Nodules

    DEFF Research Database (Denmark)

    Kunzendorf, Helmar; Pluger, W. L.; Friedrich, G. H.

    1983-01-01

    A total of 1344 manganese nodules and 187 pelagic sediments from 9 areas in the North and the South Pacific were analyzed for U by the delayed-neutron counting technique. A strong positive correlation between U and Fe in nodules and sediments suggests a co-precipitative removal from sea water int...

  4. Deep-sea mining: Current status and future considerations

    Digital Repository Service at National Institute of Oceanography (India)

    Sharma, R.

    in the international waters has necessitated its regulation under the UN Convention on the Law of the Sea through the establishment of International Seabed Authority. A sudden spurt in the number of ‘Contractors’ interested in claiming large tracts of seafloor...

  5. Matching Deep Tow Camera study and Sea Floor geochemical characterization of gas migration at the Tainan Ridge, South China Sea

    Science.gov (United States)

    Fan, L. F.; Lien, K. L.; Hsieh, I. C.; Lin, S.

    2017-12-01

    Methane seep in deep sea environment could lead to build up of chemosynthesis communities, and a number of geological and biological anomalies as compare to the surrounding area. In order to examine the linkage between seep anomalies and those at the vicinity background area, and to detail mapping those spatial variations, we used a deep towed camera system (TowCam) to survey seafloor on the Tainan Ridge, Northeastern South China Sea (SCS). The underwater sea floor pictures could provide better spatial variations to demonstrate impact of methane seep on the sea floor. Water column variations of salinity, temperature, dissolved oxygen were applied to delineate fine scale variations at the study area. In addition, sediment cores were collected for chemical analyses to confirm the existence of local spatial variations. Our results show large spatial variations existed as a result of differences in methane flux. In fact, methane is the driving force for the observed biogeochemical variations in the water column, on the sea floor, and in the sediment. Of the area we have surveyed, there are approximately 7% of total towcam survey data showing abnormal water properties. Corresponding to the water column anomalies, underwater sea floor pictures taken from those places showed that chemosynthetic clams and muscles could be identified, together with authigenic carbonate buildups, and bacterial mats. Moreover, sediment cores with chemical anomalies also matched those in the water column and on the sea floor. These anomalies, however, represent only a small portion of the area surveyed and could not be identified with typical (random) coring method. Methane seep, therefore, require tedious and multiple types of surveys to better understand the scale and magnitude of seep and biogeochemical anomalies those were driven by gas migrations.

  6. Deep-sea sponge grounds: Reservoirs of biodiversity

    NARCIS (Netherlands)

    Hogg, M.M.; Tendal, O.S.; Conway, K.W.; Pomponi, S.A.; van Soest, R.W.M.; Gutt, J.; Krautter, M.; Roberts, J.M.

    2010-01-01

    This report draws together scientific understanding of deep-water sponge grounds alongside the threats they face and ways in which they can be conserved. Beginning with a summary of research approaches, sponge biology and biodiversity, the report also gives up-to-date case studies of particular

  7. Systems analysis for disposal of radioactive wastes in deep sea bottom

    International Nuclear Information System (INIS)

    Karpf, A.D.

    1988-12-01

    Part I of the report outlines substantial fundamentals and results that impart sufficient knowledge to understand the resepctive calculations, the influence of essential parameters and to allow unambiguous conclusions as regards the potential riks of a repository in the deep sea bottom. In addition, significant features of the developed programme are described and an overview of international cooperation in this field is given. The more detailed parts II and III deal with the actual repository in the sea sediment layer and its sea biosphere, respectively. (orig./DG) [de

  8. Sensitivity of the deep-sea amphipod Eurythenes gryllus to chemically dispersed oil.

    Science.gov (United States)

    Olsen, Gro Harlaug; Coquillé, Nathalie; Le Floch, Stephane; Geraudie, Perrine; Dussauze, Matthieu; Lemaire, Philippe; Camus, Lionel

    2016-04-01

    In the context of an oil spill accident and the following oil spill response, much attention is given to the use of dispersants. Dispersants are used to disperse an oil slick from the sea surface into the water column generating a cloud of dispersed oil droplets. The main consequence is an increasing of the sea water-oil interface which induces an increase of the oil biodegradation. Hence, the use of dispersants can be effective in preventing oiling of sensitive coastal environments. Also, in case of an oil blowout from the seabed, subsea injection of dispersants may offer some benefits compared to containment and recovery of the oil or in situ burning operation at the sea surface. However, biological effects of dispersed oil are poorly understood for deep-sea species. Most effects studies on dispersed oil and also other oil-related compounds have been focusing on more shallow water species. This is the first approach to assess the sensitivity of a macro-benthic deep-sea organism to dispersed oil. This paper describes a toxicity test which was performed on the macro-benthic deep-sea amphipod (Eurythenes gryllus) to determine the concentration causing lethality to 50% of test individuals (LC50) after an exposure to dispersed Brut Arabian Light (BAL) oil. The LC50 (24 h) was 101 and 24 mg L(-1) after 72 h and 12 mg L(-1) at 96 h. Based on EPA scale of toxicity categories to aquatic organisms, an LC50 (96 h) of 12 mg L(-1) indicates that the dispersed oil was slightly to moderately toxic to E. gryllus. As an attempt to compare our results to others, a literature study was performed. Due to limited amount of data available for dispersed oil and amphipods, information on other crustacean species and other oil-related compounds was also collected. Only one study on dispersed oil and amphipods was found, the LC50 value in this study was similar to the LC50 value of E. gryllus in our study. Since toxicity data are important input to risk assessment and net environmental

  9. Rose George: Deep Sea and Foreign Going: Inside Shipping, the Invisible Industry that Brings you 90% of Everything

    DEFF Research Database (Denmark)

    Taudal Poulsen, René

    2014-01-01

    Book review of: Rose George: Deep Sea and Foreign Going: Inside Shipping, the Invisible Industry that Brings you 90% of Everything. London :Portobello Books, 2013. 320 pp. ISBN 9781846272639......Book review of: Rose George: Deep Sea and Foreign Going: Inside Shipping, the Invisible Industry that Brings you 90% of Everything. London :Portobello Books, 2013. 320 pp. ISBN 9781846272639...

  10. Exploring fungal diversity in deep-sea sediments from Okinawa Trough using high-throughput Illumina sequencing

    Science.gov (United States)

    Zhang, Xiao-Yong; Wang, Guang-Hua; Xu, Xin-Ya; Nong, Xu-Hua; Wang, Jie; Amin, Muhammad; Qi, Shu-Hua

    2016-10-01

    The present study investigated the fungal diversity in four different deep-sea sediments from Okinawa Trough using high-throughput Illumina sequencing of the nuclear ribosomal internal transcribed spacer-1 (ITS1). A total of 40,297 fungal ITS1 sequences clustered into 420 operational taxonomic units (OTUs) with 97% sequence similarity and 170 taxa were recovered from these sediments. Most ITS1 sequences (78%) belonged to the phylum Ascomycota, followed by Basidiomycota (17.3%), Zygomycota (1.5%) and Chytridiomycota (0.8%), and a small proportion (2.4%) belonged to unassigned fungal phyla. Compared with previous studies on fungal diversity of sediments from deep-sea environments by culture-dependent approach and clone library analysis, the present result suggested that Illumina sequencing had been dramatically accelerating the discovery of fungal community of deep-sea sediments. Furthermore, our results revealed that Sordariomycetes was the most diverse and abundant fungal class in this study, challenging the traditional view that the diversity of Sordariomycetes phylotypes was low in the deep-sea environments. In addition, more than 12 taxa accounted for 21.5% sequences were found to be rarely reported as deep-sea fungi, suggesting the deep-sea sediments from Okinawa Trough harbored a plethora of different fungal communities compared with other deep-sea environments. To our knowledge, this study is the first exploration of the fungal diversity in deep-sea sediments from Okinawa Trough using high-throughput Illumina sequencing.

  11. 76 FR 36511 - Fisheries of the Northeastern United States; Atlantic Deep-Sea Red Crab; Amendment 3

    Science.gov (United States)

    2011-06-22

    ...-BA22 Fisheries of the Northeastern United States; Atlantic Deep-Sea Red Crab; Amendment 3 AGENCY... the Atlantic Deep-Sea Red Crab Fishery Management Plan (FMP) (Amendment 3), incorporating a draft... current trap limit regulations state that red crab may not be harvested from gear other than a marked red...

  12. 76 FR 60379 - Fisheries of the Northeastern United States; Atlantic Deep-Sea Red Crab; Amendment 3

    Science.gov (United States)

    2011-09-29

    .... 100903433-1531-02] RIN 0648-BA22 Fisheries of the Northeastern United States; Atlantic Deep-Sea Red Crab... approved in Amendment 3 to the Atlantic Deep-Sea Red Crab Fishery Management Plan (FMP). The New England... ABC control rule.'' The NS1 guidelines further state that ``ABC may not exceed OFL,'' and that ``the...

  13. Deep-sea disposal: Scientific bases to control pollution

    International Nuclear Information System (INIS)

    Hagen, A.

    1986-01-01

    The IAEA's responsibilities are to define high-level radioactive waste that is prohibited from being dumped and make recommendations for the dumping of other radioactive waste. The IAEA had set up a series of scientific meetings and also had requested the scientific group GESAMP to advise it on suitable models for calculating concentrations of radionuclides above which sea-dumping would be prohibited. The NEA/OECD had established in 1981 a Coordinated Research and Environmental Surveillance Programme CRESP relevant to sea disposal for an initial period of 4 years. This article presents improving the scientific basis, summary of major issues and CRESP review covering five subject areas: model development, physical oceanography, geochemistry, biology, and radiological surveillance

  14. Tracer element studies on deep water formation and circulation in the European Artic Sea

    International Nuclear Information System (INIS)

    Boenisch, G.

    1991-01-01

    Tracer element investigations (tritium, helium 3, carbon 14, argon 39, krypton 85 and fluorohydrocarbons) were carried out in the European Arctic Sea. The findings are discussed with a view to their validity in the case of deep water formation and circulation. The data cover the period of 1972 through 1989. (BBR) [de

  15. Deep-sea mining: Economic, technical, technological, and environmental considerations for sustainable development

    Digital Repository Service at National Institute of Oceanography (India)

    Sharma, R.

    investment of $1.95 billion as capital expenditure and $9 billion as operating expenditure for a single deep-sea mining venture. In view of high investment, technological challenges and economic considerations, private-public cooperation could be an effective...

  16. Clay as indicator of sediment plume movement in deep-sea environment

    Digital Repository Service at National Institute of Oceanography (India)

    Valsangkar, A.B.

    artificially disturbed and resuspended 5 m above the seabed in 1997 during the Indian Deep-Sea Experiment. Initial studies have shown that the clay content during monitoring-1 phase significantly increased compared to post-disturbance, by 15 and 24...

  17. Technological and profitable analysis of airlifting in deep sea mining systems

    NARCIS (Netherlands)

    Ma, W.; van Rhee, C.; Schott, D.L.

    2017-01-01

    Airlifting technology utilized in deep-sea mining (DSM) industry was proposed in the 70s of last century, which was triggered by the discovery of vast amounts of mineral resources on the seabed. The objective of this paper is to assess the technological feasibility and profitability analyses in

  18. Similar rapid response to phytodetritus deposition in shallow and deep-sea sediments

    NARCIS (Netherlands)

    Moodley, L.; Middelburg, J.J.; Soetaert, K.E.R.; Boschker, H.T.S.; Herman, P.M.J.; Heip, C.H.R.

    2005-01-01

    The short-term benthic response to an input of fresh organic matter was examined in vastly contrasting benthic environments (estuarine intertidal to deep-sea) using 13C-labeled diatoms as a tracer of labile carbon. Benthic processing was assessed in major compartments through 13C-enrichment in CO2,

  19. Modeling food web interactions in benthic deep-sea ecosystems. A practical guide

    NARCIS (Netherlands)

    Soetaert, K.E.R.; Van Oevelen, D.J.

    2009-01-01

    Deep-sea benthic systems are notoriously difficult to sample. Even more than for other benthic systems, many flows among biological groups cannot be directly measured, and data sets remain incomplete and uncertain. In such cases, mathematical models are often used to quantify unmeasured biological

  20. Chemosynthesis in deep-sea red-clay: Linking concepts to probable martian life

    Digital Repository Service at National Institute of Oceanography (India)

    Das, A.; Mourya, B.S.; Mamatha, S.S.; Khadge, N.H.; LokaBharathi, P.A.

    of microbial biogeochemistry are used in the pres- ent deep-sea analogue studies and would be imple- mented for actual Martian soil samples in future: Microbial abundance in terms of total counts » Diversity of culture dependent and independent Chemos... soils done earlier by Viking I robots [5, Bianciardi et. al, 2012

  1. An approach for in situ studies of deep-sea amphipods and their microbial gut flora

    Science.gov (United States)

    Jannasch, H. W.; Cuhel, R. L.; Wirsen, C. O.; Taylor, C. D.

    1980-10-01

    A technique has been developed and field-tested for the trapping, feeding, and timed incubation of amphipods on the deep-sea floor. Data obtained from experiments using radiolabeled foodstuffs indicate that shifts within the labeled fractions of the major biological polymers make it possible to distinguish between the metabolism of the amphipods and that of their intestinal microflora.

  2. Ciliatamides A-C, bioactive lipopeptides from the deep-sea sponge Aaptos ciliata

    NARCIS (Netherlands)

    Nakao, Y.; Kawatsu, S.; Okamoto, C.; Okamoto, M.; Matsumoto, Y.; Matsunaga, S.; van Soest, R.W.M.; Fusetani, N.

    2008-01-01

    Three lipopeptides, ciliatamides A−C, were isolated from the deep-sea sponge Aaptos ciliata, and their structures were elucidated on the basis of spectroscopic and chemical methods. Ciliatamides A and B were found to be antileishmanial, while B also exhibited marginal cytotoxicity to HeLa cells.

  3. Ciliatamides A-C, bioactive lipopeptides from the deep-sea sponge Aaptos ciliata.

    Science.gov (United States)

    Nakao, Yoichi; Kawatsu, Shizuka; Okamoto, Chikane; Okamoto, Masaaki; Matsumoto, Yoshitsugu; Matsunaga, Shigeki; van Soest, Rob W M; Fusetani, Nobuhiro

    2008-03-01

    Three lipopeptides, ciliatamides A-C ( 1- 3), were isolated from the deep-sea sponge Aaptos ciliata, and their structures were elucidated on the basis of spectroscopic and chemical methods. Ciliatamides A ( 1) and B ( 2) were found to be antileishmanial, while 2 also exhibited marginal cytotoxicity to HeLa cells.

  4. Correlation of the Eemian (interglacial) Stage and the deep-sea oxygen-isotope stratigraphy

    International Nuclear Information System (INIS)

    Mangerud, J.; Soenstegaard, E.; Sejrup, H.-P.

    1979-01-01

    A complete interglacial sequence in coastal marine sediments in western Norway is here correlated with the Eemian Stage by means of pollen stratigraphy, and with deep-sea cores by means of marine fossils. The Eemian is correlated with isotope stage 5e. (author)

  5. Biological responses to disturbance from simulated deep-sea polymetallic nodulemining

    NARCIS (Netherlands)

    Jones, D.O.B.; Kaiser, S.; Sweetman, A.K.; Smith, C.R.; Menot, L.; Vink, A.; Trueblood, D.; Greinert, J.; Billett, D.S.M.; Martinez Arbizu, P.; Radziejewska, T.; Singh, R.; Ingole, B.; Stratmann, T.; Simon-Lledó, E.; Durden, J.M.; Clack, M.R.

    2017-01-01

    Commercial-scale mining for polymetallic nodules could have a major impact on the deepseaenvironment, but the effects of these mining activities on deep-sea ecosystems are verypoorly known. The first commercial test mining for polymetallic nodules was carried out in1970. Since then a number of

  6. Limitations of microbial hydrocarbon degradation at the Amon mud volcano (Nile deep-sea fan)

    NARCIS (Netherlands)

    Felden, J.; Lichtschlag, A.; Wenzhöfer, F.; de Beer, D.; Feseker, T.; Pop Ristova, P.; de Lange, G.; Boetius, A.

    2013-01-01

    The Amon mud volcano (MV), located at 1250m water depth on the Nile deep-sea fan, is known for its active emission of methane and non-methane hydrocarbons into the hydrosphere. Previous investigations showed a low efficiency of hydrocarbon-degrading anaerobic microbial communities inhabiting the

  7. From deep-sea volcanoes to human pathogens: a conserved quorum-sensing signal in Epsilonproteobacteria.

    Science.gov (United States)

    Pérez-Rodríguez, Ileana; Bolognini, Marie; Ricci, Jessica; Bini, Elisabetta; Vetriani, Costantino

    2015-05-01

    Chemosynthetic Epsilonproteobacteria from deep-sea hydrothermal vents colonize substrates exposed to steep thermal and redox gradients. In many bacteria, substrate attachment, biofilm formation, expression of virulence genes and host colonization are partly controlled via a cell density-dependent mechanism involving signal molecules, known as quorum sensing. Within the Epsilonproteobacteria, quorum sensing has been investigated only in human pathogens that use the luxS/autoinducer-2 (AI-2) mechanism to control the expression of some of these functions. In this study we showed that luxS is conserved in Epsilonproteobacteria and that pathogenic and mesophilic members of this class inherited this gene from a thermophilic ancestor. Furthermore, we provide evidence that the luxS gene is expressed--and a quorum-sensing signal is produced--during growth of Sulfurovum lithotrophicum and Caminibacter mediatlanticus, two Epsilonproteobacteria from deep-sea hydrothermal vents. Finally, we detected luxS transcripts in Epsilonproteobacteria-dominated biofilm communities collected from deep-sea hydrothermal vents. Taken together, our findings indicate that the epsiloproteobacterial lineage of the LuxS enzyme originated in high-temperature geothermal environments and that, in vent Epsilonproteobacteria, luxS expression is linked to the production of AI-2 signals, which are likely produced in situ at deep-sea vents. We conclude that the luxS gene is part of the ancestral epsilonproteobacterial genome and represents an evolutionary link that connects thermophiles to human pathogens.

  8. Diurnal and semi-diurnal tidal currents in the deep mid-Arabian sea

    Digital Repository Service at National Institute of Oceanography (India)

    Shenoi, S.S.C.; Gouveia, A.D.; Shetye, S.R.

    Current meter records from two depths, approximately 1000 m, at three mooring in the deep mid-Arabian Sea were used to study tidal components. Tidal ellipses for the semi-diurnal (M2, S2 and K2) and the diurnal (K1 and P1) tidal constituents have...

  9. State of the deep-sea shrimp stock of Angola | Djama | Journal of the ...

    African Journals Online (AJOL)

    Journal of the Cameroon Academy of Sciences. Journal Home · ABOUT THIS JOURNAL · Advanced Search · Current Issue · Archives · Journal Home > Vol 1, No 3 (2001) >. Log in or Register to get access to full text downloads. Username, Password, Remember me, or Register. State of the deep-sea shrimp stock of Angola.

  10. Biogeography of Persephonella in deep-sea hydrothermal vents of the Western Pacific.

    Directory of Open Access Journals (Sweden)

    Sayaka eMino

    2013-04-01

    Full Text Available Deep-sea hydrothermal vent fields are areas on the seafloor with high biological productivity fueled by microbial chemosynthesis. Members of the Aquificales genus Persephonella are obligately chemosynthetic bacteria, and appear to be key players in carbon, sulfur, and nitrogen cycles in high temperature habitats at deep-sea vents. Although this group of bacteria has cosmopolitan distribution in deep-sea hydrothermal ecosystem around the world, little is known about their population structure such as intraspecific genomic diversity, distribution pattern, and phenotypic diversity. We developed the multi-locus sequence analysis (MLSA scheme for their genomic characterization. Sequence variation was determined in five housekeeping genes and one functional gene of 36 P. hydrogeniphila strains originated from the Okinawa Trough and the South Mariana Trough. Although the strains share > 98.7% similarities in 16S rRNA gene sequences, MLSA revealed 35 different sequence types, indicating their extensive genomic diversity. A phylogenetic tree inferred from all concatenated gene sequences revealed the clustering of isolates according to the geographic origin. In addition, the phenotypic clustering pattern inferred from whole-cell matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF/MS analysis can be correlated to their MLSA clustering pattern. This study represents the first MLSA combined with phenotypic analysis indicative of allopatric speciation of deep-sea hydrothermal vent bacteria.

  11. Dynamic structure mediates halophilic adaptation of a DNA polymerase from the deep-sea brines of the Red Sea

    KAUST Repository

    Takahashi, Masateru; Takahashi, Etsuko; Joudeh, Luay I.; Marini, Monica; Das, Gobind; Elshenawy, Mohamed; Akal, Anastassja; Sakashita, Kosuke; Alam, Intikhab; Tehseen, Muhammad; Sobhy, Mohamed Abdelmaboud; Stingl, Ulrich; Merzaban, Jasmeen; Di Fabrizio, Enzo M.; Hamdan, Samir

    2018-01-01

    The deep-sea brines of the Red Sea are remote and unexplored environments characterized by high temperatures, anoxic water, and elevated concentrations of salt and heavy metals. This environment provides a rare system to study the interplay between halophilic and thermophilic adaptation in biologic macromolecules. The present article reports the first DNA polymerase with halophilic and thermophilic features. Biochemical and structural analysis by Raman and circular dichroism spectroscopy showed that the charge distribution on the protein’s surface mediates the structural balance between stability for thermal adaptation and flexibility for counteracting the salt-induced rigid and nonfunctional hydrophobic packing. Salt bridge interactions via increased negative and positive charges contribute to structural stability. Salt tolerance, conversely, is mediated by a dynamic structure that becomes more fixed and functional with increasing salt concentration. We propose that repulsive forces among excess negative charges, in addition to a high percentage of negatively charged random coils, mediate this structural dynamism. This knowledge enabled us to engineer a halophilic version of KOD DNA polymerase.—Takahashi, M., Takahashi, E., Joudeh, L. I., Marini, M., Das, G., Elshenawy, M. M., Akal, A., Sakashita, K., Alam, I., Tehseen, M., Sobhy, M. A., Stingl, U., Merzaban, J. S., Di Fabrizio, E., Hamdan, S. M. Dynamic structure mediates halophilic adaptation of a DNA polymerase from the deep-sea brines of the Red Sea.

  12. Captive rearing of the deep-sea coral Eguchipsammia fistula from the Red Sea demonstrates remarkable physiological plasticity

    KAUST Repository

    Roik, Anna Krystyna; Rö thig, Till; Roder, Cornelia; Muller, Paul Joachim; Voolstra, Christian R.

    2015-01-01

    The presence of the cosmopolitan deep-sea coral Eguchipsammia fistula has recently been documented in the Red Sea, occurring in warm (>20 °C), oxygen- and nutrient-limited habitats. We collected colonies of this species from the central Red Sea that successfully resided in aquaria for more than one year. During this period the corals were exposed to increased oxygen levels and nutrition ad libitum unlike in their natural habitat. Specimens of long-term reared E. fistula colonies were incubated for 24 h and calcification (G) as well as respiration rates (R) were measured. In comparison to on-board measurements of G and R rates on freshly collected specimens, we found that G was increased while R was decreased. E. fistula shows extensive tissue growth and polyp proliferation in aquaculture and can be kept at conditions that notably differ from its natural habitat. Its ability to cope with rapid and prolonged changes in regard to prevailing environmental conditions indicates a wide physiological plasticity. This may explain in part the cosmopolitan distribution of this species and emphasizes its value as a deep-sea coral model to study mechanisms of acclimation and adaptation.

  13. Dynamic structure mediates halophilic adaptation of a DNA polymerase from the deep-sea brines of the Red Sea.

    Science.gov (United States)

    Takahashi, Masateru; Takahashi, Etsuko; Joudeh, Luay I; Marini, Monica; Das, Gobind; Elshenawy, Mohamed M; Akal, Anastassja; Sakashita, Kosuke; Alam, Intikhab; Tehseen, Muhammad; Sobhy, Mohamed A; Stingl, Ulrich; Merzaban, Jasmeen S; Di Fabrizio, Enzo; Hamdan, Samir M

    2018-01-24

    The deep-sea brines of the Red Sea are remote and unexplored environments characterized by high temperatures, anoxic water, and elevated concentrations of salt and heavy metals. This environment provides a rare system to study the interplay between halophilic and thermophilic adaptation in biologic macromolecules. The present article reports the first DNA polymerase with halophilic and thermophilic features. Biochemical and structural analysis by Raman and circular dichroism spectroscopy showed that the charge distribution on the protein's surface mediates the structural balance between stability for thermal adaptation and flexibility for counteracting the salt-induced rigid and nonfunctional hydrophobic packing. Salt bridge interactions via increased negative and positive charges contribute to structural stability. Salt tolerance, conversely, is mediated by a dynamic structure that becomes more fixed and functional with increasing salt concentration. We propose that repulsive forces among excess negative charges, in addition to a high percentage of negatively charged random coils, mediate this structural dynamism. This knowledge enabled us to engineer a halophilic version of KOD DNA polymerase.-Takahashi, M., Takahashi, E., Joudeh, L. I., Marini, M., Das, G., Elshenawy, M. M., Akal, A., Sakashita, K., Alam, I., Tehseen, M., Sobhy, M. A., Stingl, U., Merzaban, J. S., Di Fabrizio, E., Hamdan, S. M. Dynamic structure mediates halophilic adaptation of a DNA polymerase from the deep-sea brines of the Red Sea.

  14. Captive rearing of the deep-sea coral Eguchipsammia fistula from the Red Sea demonstrates remarkable physiological plasticity.

    Science.gov (United States)

    Roik, Anna; Röthig, Till; Roder, Cornelia; Müller, Paul J; Voolstra, Christian R

    2015-01-01

    The presence of the cosmopolitan deep-sea coral Eguchipsammia fistula has recently been documented in the Red Sea, occurring in warm (>20 °C), oxygen- and nutrient-limited habitats. We collected colonies of this species from the central Red Sea that successfully resided in aquaria for more than one year. During this period the corals were exposed to increased oxygen levels and nutrition ad libitum unlike in their natural habitat. Specimens of long-term reared E. fistula colonies were incubated for 24 h and calcification (G) as well as respiration rates (R) were measured. In comparison to on-board measurements of G and R rates on freshly collected specimens, we found that G was increased while R was decreased. E. fistula shows extensive tissue growth and polyp proliferation in aquaculture and can be kept at conditions that notably differ from its natural habitat. Its ability to cope with rapid and prolonged changes in regard to prevailing environmental conditions indicates a wide physiological plasticity. This may explain in part the cosmopolitan distribution of this species and emphasizes its value as a deep-sea coral model to study mechanisms of acclimation and adaptation.

  15. Captive rearing of the deep-sea coral Eguchipsammia fistula from the Red Sea demonstrates remarkable physiological plasticity

    KAUST Repository

    Roik, Anna Krystyna

    2015-01-20

    The presence of the cosmopolitan deep-sea coral Eguchipsammia fistula has recently been documented in the Red Sea, occurring in warm (>20 °C), oxygen- and nutrient-limited habitats. We collected colonies of this species from the central Red Sea that successfully resided in aquaria for more than one year. During this period the corals were exposed to increased oxygen levels and nutrition ad libitum unlike in their natural habitat. Specimens of long-term reared E. fistula colonies were incubated for 24 h and calcification (G) as well as respiration rates (R) were measured. In comparison to on-board measurements of G and R rates on freshly collected specimens, we found that G was increased while R was decreased. E. fistula shows extensive tissue growth and polyp proliferation in aquaculture and can be kept at conditions that notably differ from its natural habitat. Its ability to cope with rapid and prolonged changes in regard to prevailing environmental conditions indicates a wide physiological plasticity. This may explain in part the cosmopolitan distribution of this species and emphasizes its value as a deep-sea coral model to study mechanisms of acclimation and adaptation.

  16. Captive rearing of the deep-sea coral Eguchipsammia fistula from the Red Sea demonstrates remarkable physiological plasticity

    Directory of Open Access Journals (Sweden)

    Anna Roik

    2015-01-01

    Full Text Available The presence of the cosmopolitan deep-sea coral Eguchipsammia fistula has recently been documented in the Red Sea, occurring in warm (>20 °C, oxygen- and nutrient-limited habitats. We collected colonies of this species from the central Red Sea that successfully resided in aquaria for more than one year. During this period the corals were exposed to increased oxygen levels and nutrition ad libitum unlike in their natural habitat. Specimens of long-term reared E. fistula colonies were incubated for 24 h and calcification (G as well as respiration rates (R were measured. In comparison to on-board measurements of G and R rates on freshly collected specimens, we found that G was increased while R was decreased. E. fistula shows extensive tissue growth and polyp proliferation in aquaculture and can be kept at conditions that notably differ from its natural habitat. Its ability to cope with rapid and prolonged changes in regard to prevailing environmental conditions indicates a wide physiological plasticity. This may explain in part the cosmopolitan distribution of this species and emphasizes its value as a deep-sea coral model to study mechanisms of acclimation and adaptation.

  17. Dynamic structure mediates halophilic adaptation of a DNA polymerase from the deep-sea brines of the Red Sea

    KAUST Repository

    Takahashi, Masateru

    2018-01-24

    The deep-sea brines of the Red Sea are remote and unexplored environments characterized by high temperatures, anoxic water, and elevated concentrations of salt and heavy metals. This environment provides a rare system to study the interplay between halophilic and thermophilic adaptation in biologic macromolecules. The present article reports the first DNA polymerase with halophilic and thermophilic features. Biochemical and structural analysis by Raman and circular dichroism spectroscopy showed that the charge distribution on the protein’s surface mediates the structural balance between stability for thermal adaptation and flexibility for counteracting the salt-induced rigid and nonfunctional hydrophobic packing. Salt bridge interactions via increased negative and positive charges contribute to structural stability. Salt tolerance, conversely, is mediated by a dynamic structure that becomes more fixed and functional with increasing salt concentration. We propose that repulsive forces among excess negative charges, in addition to a high percentage of negatively charged random coils, mediate this structural dynamism. This knowledge enabled us to engineer a halophilic version of KOD DNA polymerase.—Takahashi, M., Takahashi, E., Joudeh, L. I., Marini, M., Das, G., Elshenawy, M. M., Akal, A., Sakashita, K., Alam, I., Tehseen, M., Sobhy, M. A., Stingl, U., Merzaban, J. S., Di Fabrizio, E., Hamdan, S. M. Dynamic structure mediates halophilic adaptation of a DNA polymerase from the deep-sea brines of the Red Sea.

  18. Testing deep-sea biodiversity paradigms on abyssal nematode genera and Acantholaimus species

    Science.gov (United States)

    Lins, Lidia; da Silva, Maria Cristina; Neres, Patrícia; Esteves, André Morgado; Vanreusel, Ann

    2018-02-01

    Biodiversity patterns in the deep sea have been extensively studied in the last decades. In this study, we investigated whether reputable concepts in deep-sea ecology also explain diversity and distribution patterns of nematode genera and species in the abyss. Among them, three paradigms were tackled: (1) the deep sea is a highly diverse environment at a local scale, while on a regional and even larger geographical scale, species and genus turnover is limited; (2) the biodiversity of deep-sea nematode communities changes with the nature and amount of organic matter input from the surface; and (3) patch-mosaic dynamics of the deep-sea environment drive local diversity. To test these hypotheses, diversity and density of nematode assemblages and of species of the genus Acantholaimus were studied along two abyssal E-W transects. These two transects were situated in the Southern Ocean ( 50°S) and the North Atlantic ( 10°N). Four different hierarchical scales were used to compare biodiversity: at the scale of cores, between stations from the same region, and between regions. Results revealed that the deep sea harbours a high diversity at a local scale (alpha diversity), but that turnover can be shaped by different environmental drivers. Therefore, these results question the second part of the paradigm about limited species turnover in the deep sea. Higher surface primary productivity was correlated with greater nematode densities, whereas diversity responses to the augmentation of surface productivity showed no trend. Areas subjected to a constant and low food input revealed similar nematode communities to other oligotrophic abyssal areas, while stations under high productivity were characterized by different dominant genera and Acantholaimus species, and by a generally low local diversity. Our results corroborate the species-energy hypothesis, where productivity can set a limit to the richness of an ecosystem. Finally, we observed no correlation between sediment

  19. Deserts on the sea floor: Edward Forbes and his azoic hypothesis for a lifeless deep ocean.

    Science.gov (United States)

    Anderson, Thomas R; Rice, Tony

    2006-12-01

    While dredging in the Aegean Sea during the mid-19th century, Manxman Edward Forbes noticed that plants and animals became progressively more impoverished the greater the depth they were from the surface of the water. By extrapolation Forbes proposed his now infamous azoic hypothesis, namely that life would be extinguished altogether in the murky depths of the deep ocean. The whole idea seemed so entirely logical given the enormous pressure, cold and eternal darkness of this apparently uninhabitable environment. Yet we now know that the sea floor is teeming with life. Curiously, it took 25 years for the azoic hypothesis to fall from grace. This was despite the presence of ample contrary evidence, including starfishes, worms and other organisms that seemingly originated from the deep seabed. This is a tale of scientists ignoring observations that ran counter to their deep-seated, yet entirely erroneous, beliefs.

  20. From Exploration to Exploitation? Opportunities and Imperatives in the Deep Sea

    KAUST Repository

    Van Dover, Cindy Lee

    2017-01-16

    We may think of the depths of the ocean as unseen, unfathomable, but there have been breakthroughs in technology that allow scientists access to the deep sea and that bring the deep sea directly to the public through live video feeds and data links. We can now map the seafloor to resolve features the size of a football and smaller using sound waves, while at the same time, sensors report to us the chemical nature of the surrounding environment. We will look at examples of robots and other assets that we use to explore the seafloor and at some of the discoveries that arise from our expanding capabilities. We will look at some of the blank places on the map and wonder what might be located there. And finally, we will explore the growing interest in mining the seabed and the potential for a Blue Economy in the deep ocean.

  1. Model output for deep-sea coral habitat suitability in the U.S. North and Mid-Atlantic from 2013 (NCEI Accession 0145923)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This dataset was created for potential use as an environmental predictor in spatial predictive models of deep-sea coral habitat suitability. Deep-sea corals are of...

  2. Fungal diversity in deep-sea sediments associated with asphalt seeps at the Sao Paulo Plateau

    Science.gov (United States)

    Nagano, Yuriko; Miura, Toshiko; Nishi, Shinro; Lima, Andre O.; Nakayama, Cristina; Pellizari, Vivian H.; Fujikura, Katsunori

    2017-12-01

    We investigated the fungal diversity in a total of 20 deep-sea sediment samples (of which 14 samples were associated with natural asphalt seeps and 6 samples were not associated) collected from two different sites at the Sao Paulo Plateau off Brazil by Ion Torrent PGM targeting ITS region of ribosomal RNA. Our results suggest that diverse fungi (113 operational taxonomic units (OTUs) based on clustering at 97% sequence similarity assigned into 9 classes and 31 genus) are present in deep-sea sediment samples collected at the Sao Paulo Plateau, dominated by Ascomycota (74.3%), followed by Basidiomycota (11.5%), unidentified fungi (7.1%), and sequences with no affiliation to any organisms in the public database (7.1%). However, it was revealed that only three species, namely Penicillium sp., Cadophora malorum and Rhodosporidium diobovatum, were dominant, with the majority of OTUs remaining a minor community. Unexpectedly, there was no significant difference in major fungal community structure between the asphalt seep and non-asphalt seep sites, despite the presence of mass hydrocarbon deposits and the high amount of macro organisms surrounding the asphalt seeps. However, there were some differences in the minor fungal communities, with possible asphalt degrading fungi present specifically in the asphalt seep sites. In contrast, some differences were found between the two different sampling sites. Classification of OTUs revealed that only 47 (41.6%) fungal OTUs exhibited >97% sequence similarity, in comparison with pre-existing ITS sequences in public databases, indicating that a majority of deep-sea inhabiting fungal taxa still remain undescribed. Although our knowledge on fungi and their role in deep-sea environments is still limited and scarce, this study increases our understanding of fungal diversity and community structure in deep-sea environments.

  3. Surface oceanographic fronts influencing deep-sea biological activity: Using fish stable isotopes as ecological tracers

    Science.gov (United States)

    Louzao, Maite; Navarro, Joan; Delgado-Huertas, Antonio; de Sola, Luis Gil; Forero, Manuela G.

    2017-06-01

    Ecotones can be described as transition zones between neighbouring ecological systems that can be shaped by environmental gradients over a range of space and time scales. In the marine environment, the detection of ecotones is complex given the highly dynamic nature of marine systems and the paucity of empirical data over ocean-basin scales. One approach to overcome these limitations is to use stable isotopes from animal tissues since they can track spatial oceanographic variability across marine systems and, in turn, can be used as ecological tracers. Here, we analysed stable isotopes of deep-sea fishes to assess the presence of ecological discontinuities across the western Mediterranean. We were specifically interested in exploring the connection between deep-sea biological activity and particular oceanographic features (i.e., surface fronts) occurring in the pelagic domain. We collected samples for three different abundant deep-sea species in May 2004 from an experimental oceanographic trawling cruise (MEDITS): the Mictophydae jewel lanternfish Lampanyctus crocodilus and two species of the Gadidae family, the silvery pout Gadiculus argenteus and the blue whiting Micromesistius poutassou. The experimental survey occurred along the Iberian continental shelf and the upper and middle slopes, from the Strait of Gibraltar in the SW to the Cape Creus in the NE. The three deep-sea species were highly abundant throughout the study area and they showed geographic variation in their isotopic values, with decreasing values from north to south disrupted by an important change point around the Vera Gulf. Isotopic latitudinal gradients were explained by pelagic oceanographic conditions along the study area and confirm the existence of an ecotone at the Vera Gulf. This area could be considered as an oceanographic boundary where waters of Atlantic origin meet Mediterranean surface waters forming important frontal structures such as the Almeria-Oran front. In fact, our results

  4. Larval transport modeling of deep-sea invertebrates can aid the search for undiscovered populations.

    Directory of Open Access Journals (Sweden)

    Jon M Yearsley

    Full Text Available BACKGROUND: Many deep-sea benthic animals occur in patchy distributions separated by thousands of kilometres, yet because deep-sea habitats are remote, little is known about their larval dispersal. Our novel method simulates dispersal by combining data from the Argo array of autonomous oceanographic probes, deep-sea ecological surveys, and comparative invertebrate physiology. The predicted particle tracks allow quantitative, testable predictions about the dispersal of benthic invertebrate larvae in the south-west Pacific. PRINCIPAL FINDINGS: In a test case presented here, using non-feeding, non-swimming (lecithotrophic trochophore larvae of polyplacophoran molluscs (chitons, we show that the likely dispersal pathways in a single generation are significantly shorter than the distances between the three known population centres in our study region. The large-scale density of chiton populations throughout our study region is potentially much greater than present survey data suggest, with intermediate 'stepping stone' populations yet to be discovered. CONCLUSIONS/SIGNIFICANCE: We present a new method that is broadly applicable to studies of the dispersal of deep-sea organisms. This test case demonstrates the power and potential applications of our new method, in generating quantitative, testable hypotheses at multiple levels to solve the mismatch between observed and expected distributions: probabilistic predictions of locations of intermediate populations, potential alternative dispersal mechanisms, and expected population genetic structure. The global Argo data have never previously been used to address benthic biology, and our method can be applied to any non-swimming larvae of the deep-sea, giving information upon dispersal corridors and population densities in habitats that remain intrinsically difficult to assess.

  5. Periodic fluctuations in deep water formation due to sea ice

    Science.gov (United States)

    Saha, R.

    2012-12-01

    During the last ice age, several abrupt warming events took place, known as Dansgaard-Oeschger (D-O) events. Their effects were felt globally, although the North Atlantic experienced the largest temperature increase. The leading hypothesis to explain their occurrence postulates that the warming was caused by abrupt disruptions of the North Atlantic Current due to meltwater discharge from destabilized ice sheets (Heinrich events). However, the number of warming events outnumber the those of ice-sheet collapse. Thus, the majority of D-O events are not attributed to surface freshwater anomalies, and the underlying mechanism behind their occurrence remain unexplained. Using a simple dynamical model of sea ice and an overturning circulation, I show the existence of self-sustained relaxation oscillations in the overturning circulation. The insulating effect of sea ice is shown to paradoxically lead to a net loss of heat from the top layer of the polar ocean when sea ice retreats. Repeated heat loss results in a denser top layer and a destabilized water column, which triggers convection. The convective state pulls the system out of its preferred mode of circulation, setting up relaxation oscillations. The period of oscillations in this case is linked to the geometry of the ocean basin, if solar forcing is assumed to remain constant. If appropriate glacial freshwater forcing is applied to the model, a pattern of oscillation is produced that bears remarkable similarity to the observed fluctuations in North Atlantic climate between 50,000 and 30,000 years before present.; Comparison of NGRIP δ 18-O (proxy for near surface air temperature) between 50,000 and 30,000 years before present, showing Bond cycles (left) with the model output when forced with appropriate glacial freshwater forcing (right).

  6. Deep-Sea Trench Microbiology Down to 10.9 Kilometers Below the Surface

    Science.gov (United States)

    Bartlett, D. H.

    2012-12-01

    Deep-sea trenches, extending to more than 10.9 km below the sea surface, are among the most remote and infrequently sampled habitats. As a result a global perspective of microbial diversity and adaptation is lacking in these extreme settings. I will present the results of studies of deep-sea trench microbes collected in the Puerto Rico Trench (PRT), Tonga Trench, New Britain Trench and Mariana Trench. The samples collected include sediment, seawater and animals in baited traps. The analyses to be described include microbial community activity and viability measurements as a function of hydrostatic pressure, microbial culturing at high pressure under various physiological conditions, phylogenetics and metagenome and single-cell genome characterizations. Most of the results to date stem from samples recovered from the PRT. The deep-sea PRT Trench microbes have more in common at the species level with other deep-sea microbial communities previously characterized in the Pacific Ocean and the Mediterranean Sea than with the microbial populations above them in shallow waters. They also harbor larger genomes with more genes assigned to signal transduction, transcription, replication, recombination and repair and inorganic ion transport. The overrepresented transporters in the PRT metagenome include di- and tri-carboxylate transporters that correspond to the prevailing catabolic processes such as butanoate, glyoxylate and dicarboxylate metabolism. A surprisingly high abundance of sulfatases for the degradation of sulfated polysaccharides were also present in the PRT. But, perhaps the most dramatic adaptational feature of the PRT microbes is heavy metal resistance, as reflected in the high numbers of metal efflux systems present. Single-cell genomics approaches have proven particularly useful for placing PRT metagenomic data into context.

  7. Trophic ecology of deep-sea Asteroidea (Echinodermata) from eastern Canada

    Science.gov (United States)

    Gale, Katie S. P.; Hamel, Jean-François; Mercier, Annie

    2013-10-01

    Asteroids (sea stars) can be important predators in benthic communities and are often present in ecologically important and vulnerable deep-sea coral and sponge habitats. However, explicit studies on the trophic ecology of deep-sea asteroids are rare. We investigated the diets of seven species of deep-sea asteroid from the bathyal zone of Newfoundland and Labrador, eastern Canada. A multifaceted approach including live animal observations, stomach content analysis, and stable isotope analysis revealed the asteroids to be either top predators of megafauna or secondary consumers (mud ingesters, infaunal predators, and suspension feeders). The stable isotope signatures of Ceramaster granularis, Hippasteria phrygiana, and Mediaster bairdi are characteristic of high-level predators, having δ15N values 4.4‰ (more than one trophic level) above Ctenodiscus crispatus, Leptychaster arcticus, Novodinia americana, and Zoroaster fulgens. We present strong evidence that corals and sponges are common food items for two of the predatory species, C. granularis and H. phrygiana. During laboratory feeding trials, live H. phrygiana fed on several species of soft coral and C. granularis fed on sponges. Stomach content analysis of wild-caught individuals revealed sclerites from sea pens (e.g. Pennatula sp.) in the stomachs of both asteroid species; H. phrygiana also contained sclerites from at least two other species of octocoral and siliceous sponge spicules were present in the stomachs of C. granularis. The stomach contents of the secondary consumers contained a range of invertebrate material. Leptychaster arcticus and Ctenodiscus crispatus feed infaunally on bulk sediment and molluscs, Zoroaster fulgens is a generalist infaunal predator, and the brisingid Novodinia americana is a specialist suspension feeder on benthopelagic crustaceans. This study provides a foundation for understanding the ecological roles of bathyal asteroids, and suggests that some species may have the

  8. Offshore Floating Wind Turbine-driven Deep Sea Water Pumping for Combined Electrical Power and District Cooling

    International Nuclear Information System (INIS)

    Sant, T; Buhagiar, D; Farrugia, R N

    2014-01-01

    A new concept utilising floating wind turbines to exploit the low temperatures of deep sea water for space cooling in buildings is presented. The approach is based on offshore hydraulic wind turbines pumping pressurised deep sea water to a centralised plant consisting of a hydro-electric power system coupled to a large-scale sea water-cooled air conditioning (AC) unit of an urban district cooling network. In order to investigate the potential advantages of this new concept over conventional technologies, a simplified model for performance simulation of a vapour compression AC unit was applied independently to three different systems, with the AC unit operating with (1) a constant flow of sea surface water, (2) a constant flow of sea water consisting of a mixture of surface sea water and deep sea water delivered by a single offshore hydraulic wind turbine and (3) an intermittent flow of deep sea water pumped by a single offshore hydraulic wind turbine. The analysis was based on one year of wind and ambient temperature data for the Central Mediterranean that is known for its deep waters, warm climate and relatively low wind speeds. The study confirmed that while the present concept is less efficient than conventional turbines utilising grid-connected electrical generators, a significant portion of the losses associated with the hydraulic transmission through the pipeline are offset by the extraction of cool deep sea water which reduces the electricity consumption of urban air-conditioning units

  9. Offshore Floating Wind Turbine-driven Deep Sea Water Pumping for Combined Electrical Power and District Cooling

    Science.gov (United States)

    Sant, T.; Buhagiar, D.; Farrugia, R. N.

    2014-06-01

    A new concept utilising floating wind turbines to exploit the low temperatures of deep sea water for space cooling in buildings is presented. The approach is based on offshore hydraulic wind turbines pumping pressurised deep sea water to a centralised plant consisting of a hydro-electric power system coupled to a large-scale sea water-cooled air conditioning (AC) unit of an urban district cooling network. In order to investigate the potential advantages of this new concept over conventional technologies, a simplified model for performance simulation of a vapour compression AC unit was applied independently to three different systems, with the AC unit operating with (1) a constant flow of sea surface water, (2) a constant flow of sea water consisting of a mixture of surface sea water and deep sea water delivered by a single offshore hydraulic wind turbine and (3) an intermittent flow of deep sea water pumped by a single offshore hydraulic wind turbine. The analysis was based on one year of wind and ambient temperature data for the Central Mediterranean that is known for its deep waters, warm climate and relatively low wind speeds. The study confirmed that while the present concept is less efficient than conventional turbines utilising grid-connected electrical generators, a significant portion of the losses associated with the hydraulic transmission through the pipeline are offset by the extraction of cool deep sea water which reduces the electricity consumption of urban air-conditioning units.

  10. Uranium in Pacific deep-sea sediments and manganese nodules

    International Nuclear Information System (INIS)

    Kunzendorf, H.; Plueger, W.L.; Friedrich, G.H.

    1983-01-01

    A total of 1344 manganese nodules and 187 pelagic sediments from 9 areas in the North and the South Pacific were analyzed for U by the delayed-neutron counting technique. A strong positive correlation between U and Fe in nodules and sediments suggests a co-precipitative removal from sea water into the Fe-rich (ferromanganese mineral phase MnO 2 . Enrichment of U and Fe in nodules from the northwestern slopes of two submarine hills (U between 6 and 9 ppm) in the equatorial nodule belt is thought to be caused by directional bottom water flow creating elevated oxygenized conditions in areas opposed to the flow. Economically important nodule deposits from the nodule belt and the Peru Basin have generally low U contents, between 3 and 5 ppm. Insignificant resources of U of about 4 x 10 5 in the Pacific manganese nodules are estimated. (orig.)

  11. Radiological aspects of sea bed dumping in the deep oceans

    International Nuclear Information System (INIS)

    Templeton, W.L.

    1979-01-01

    In order to control coastal discharges or ocean dumping of any kind of material, it is necessary to determine a release rate. This can only come from a knowledge of the composition and chemical form of the source materials, the distribution and bioavailability of these materials in the ocean ecosystem, the degree and rates of bioaccumulation and the actual or potential use of the ocean resources. With this information release rates within acceptable limits for man and the ecosystem can then be determined. Today, probably the only situations which apply this approach are the controlled disposal of radioactive wastes. In this paper a recent radiological assessment of the dumping of packaged radioactive wastes on the seabed is discussed and some environmental aspects of the United States Department of Energy program are described examining the feasibility of the emplacement of contained radioactive wastes within the deep ocean sediments

  12. Studies of deep water formation and circulation in the Weddell Sea using natural and anthropogenic tracers

    International Nuclear Information System (INIS)

    Schlosser, Peter; Bayer, Reinhold

    1991-01-01

    The application of natural and anthropogenic trace substances in oceanographic studies of the Weddell Sea is reviewed. The potential of some steady-state and transient tracers (tritium, CFC-11 and CFC-12, 18 O, and helium isotopes) for studies of deep water formation and circulation is discussed on the basis of data sets collected mainly on cruises of R/V 'Polastern' to the Weddell Sea during the 1980s. CFC/ tritium ratio dating of young water masses is applied to estimate mean age and transit times of water involved in Weddell Sea Bottom Water formation. The history of the CFC-11/tritium ratio through time is derived for Weddell Sea shelf waters. (author). 36 refs.; 18 figs

  13. High Acidification Rate of Norwegian Sea Revealed by Boron Isotopes in the Deep-Sea Coral Madrepora Oculata

    Science.gov (United States)

    Gonzalez, C.; Douville, E.; Hall-Spencer, J.; Montagna, P.; Louvat, P.; Gaillardet, J.; Frank, N.; Bordier, L.; Juillet-Leclerc, A.

    2012-12-01

    Ocean acidification and global warming due to the increase of anthropogenic CO2 are major threats for marine calcifying organisms, such as deep-sea corals, particularly in high-latitude regions. In order to evaluate the current anthropogenic perturbation and to properly assess the impacts and responses of calcifiers to previous changes in pH it is critical to investigate past changes of the seawater carbonate system. Unfortunately, current instrumental records of oceanic pH are limited, covering only a few decades. Scleractinian coral skeletons record chemical parameters of the seawater in which they grow. However, pH variability over multidecadal timescales remains largely unknown in intermediate and deep seawater masses. Here we present a study that highlights the potential of deep-sea-corals to overcome the lack of long-term pH records and that emphasizes a rapid acidification of high latitude subsurface waters of Norwegian Sea during the past decades. We have reconstructed seawater pH and temperature from a well dated deep-sea coral specimen Madrepora oculata collected alive from Røst reef in Norwegian Sea (67°N, 9°E, 340 m depth). This large branching framework forming coral species grew its skeleton over more than four decades determined using AMS 14C and 210Pb dating (Sabatier et al. 2012). B-isotopes and Li/Mg ratios yield an acidification rate of about -0.0030±0.0008 pH-unit.year-1 and a warming of 0.3°C during the past four decades (1967-2007). Overall our reconstruction technique agrees well with previous pH calculations (Hönisch et al., 2007 vs. Trotter et al., 2011 and McCulloch et al., 2012, i.e. the iterative method), but additional corrections are here applied using stable isotope correlations (O, C, B) to properly address kinetic fractionation of boron isotopes used for pH reconstruction. The resulting pH curve strongly anti-correlates with the annual NAO index, which further strengthens our evidence for the ocean acidification rate

  14. Exchanges between the shelf and the deep Black Sea: an integrated analysis of physical mechanisms

    Science.gov (United States)

    Shapiro, Georgy; Wobus, Fred; Zatsepin, Andrei; Akivis, Tatiana; Zhou, Feng

    2017-04-01

    This study provides an integrated analysis of exchanges of water, salt and heat between the north-western Black Sea shelf and the deep basin. Three contributing physical mechanisms are quantified, namely: Ekman drift, transport by mesoscale eddies at the edge of the NW Black Sea shelf and non-local cascading assisted by the rim current and mesoscale eddies. The semi-enclosed nature of the Black Sea together with its unique combination of an extensive shelf area in the North West and the deep central part make it sensitive to natural variations of fluxes, including the fluxes between the biologically productive shelf and predominantly anoxic deep sea. Exchanges between the shelf and deep sea play an important role in forming the balance of waters, nutrients and pollution within the coastal areas, and hence the level of human-induced eutrophication of coastal waters (MSFD Descriptor 5). In this study we analyse physical mechanisms and quantify shelf-deep sea exchange processes in the Black Sea sector using the NEMO ocean circulation model. The model is configured and optimized taking into account specific features of the Black Sea, and validated against in-situ and satellite observations. The study uses NEMO-BLS24 numerical model which is based on the NEMO codebase v3.2.1 with amendments introduced by the UK Met Office. The model has a horizontal resolution of 1/24×1/24° and a hybrid s-on-top-of-z vertical coordinate system with a total of 33 layers. The horizontal viscosity/diffusivity operator is rotated to reduce the contamination of vertical diffusion/viscosity by large values of their horizontal counterparts. The bathymetry is processed from ETOPO5 and capped to 1550m. Atmospheric forcing for the period 1989-2012 is given by the Drakkar Forcing Set v5.2. For comparison, the NCEP atmospheric forcing also used for 2005. The climatological runoff from 8 major rivers is included. We run the model individually for 24 calendar years without data assimilation. For

  15. Harpacticoid copepod diversity at two physically reworked sites in the deep sea

    Science.gov (United States)

    Thistle, David

    1998-01-01

    Grassle's and Jumars' theories of diversity maintenance in the quiescent deep sea view millimeter-to-meter-scale patchiness (mostly of biological origin) as crucial. In other deep-sea regions, episodes of strong near-bottom flow put the surficial sediment layers into motion, obliterating the biologically produced, millimeter-to-meter-scale patchiness. Under these theories, sites eroded so frequently that such patchiness is eliminated almost as soon as it is created should have lower diversities than sites where the time between erosive events is sufficient for this type of patchiness to be produced and exploited. I tested this prediction by comparing the diversities of harpacticoid copepods at two sites on Fieberling Guyot to determine whether Grassle's and Jumars' theories can be extended to the portion of the deep sea that experiences episodic erosive flows. At White Sand Swale (=WSS) (32°27.581'N, 127°47.839'W), strong near-bottom flows erode the surficial sediment daily. At Sea Pen Rim (=SPR) (32°27.631'N, 127°49.489'W), strong near-bottom flows erode the surficial sediment a few times annually. Contrary to expectation, the diversity of harpacticoid copepods was significantly greater at WSS than at SPR. However, the erosion regime at WSS may create small-scale patchiness that promotes harpacticoid diversity.

  16. Feeding in deep-sea demosponges: Influence of abiotic and biotic factors

    Science.gov (United States)

    Robertson, Leah M.; Hamel, Jean-François; Mercier, Annie

    2017-09-01

    In shallow benthic communities, sponges are widely recognized for their ability to contribute to food webs by cycling nutrients and mediating carbon fluxes through filter feeding. In comparison, little is known about filter feeding in deep-sea species and how it may be modulated by environmental conditions. Here, a rare opportunity to maintain live healthy deep-sea sponges for an extended period led to a preliminary experimental study of their feeding metrics. This work focused on demosponges collected from the continental slope of eastern Canada at 1000 m depth. Filtration rates (as clearance of phytoplankton cells) at holding temperature (6 °C) were positively correlated with food particle concentration, ranging on average from 18.8 to 160.6 cells ml-1 h-1 at nominal concentrations of 10,000-40,000 cells ml-1. Cell clearance was not significantly affected by decreasing seawater temperature, from 6 °C to 3 °C or 0 °C, although two of the sponges showed decreased filtration rates. Low pH ( 7.5) and the presence of a predatory sea star markedly depressed or inhibited feeding activity in all sponges tested. While performed under laboratory conditions on a limited number of specimens, this work highlights the possible sensitivity of deep-sea demosponges to various types and levels of biotic and abiotic factors, inferring a consequent vulnerability to natural and anthropogenic disturbances.

  17. Gulf of Mexico Deep-Sea Coral Ecosystem Studies, 2008-2011

    Science.gov (United States)

    Kellogg, Christina A.

    2009-01-01

    Most people are familiar with tropical coral reefs, located in warm, well-illuminated, shallow waters. However, corals also exist hundreds and even thousands of meters below the ocean surface, where it is cold and completely dark. These deep-sea corals, also known as cold-water corals, have become a topic of interest due to conservation concerns over the impacts of trawling, exploration for oil and gas, and climate change. Although the existence of these corals has been known since the 1800s, our understanding of their distribution, ecology, and biology is limited due to the technical difficulties of conducting deep-sea research. DISCOVRE (DIversity, Systematics, and COnnectivity of Vulnerable Reef Ecosystems) is a new U.S. Geological Survey (USGS) program focused on deep-water coral ecosystems in the Gulf of Mexico. This integrated, multidisciplinary, international effort investigates a variety of topics related to unique and fragile deep-sea coral ecosystems from the microscopic level to the ecosystem level, including components of microbiology, population genetics, paleoecology, food webs, taxonomy, community ecology, physical oceanography, and mapping.

  18. Genetic homogeneity in the deep-sea grenadier Macrourus berglax across the North Atlantic Ocean

    Science.gov (United States)

    Coscia, Ilaria; Castilho, Rita; Massa-Gallucci, Alexia; Sacchi, Carlotta; Cunha, Regina L.; Stefanni, Sergio; Helyar, Sarah J.; Knutsen, Halvor; Mariani, Stefano

    2018-02-01

    Paucity of data on population structure and connectivity in deep sea species remains a major obstacle to their sustainable management and conservation in the face of ever increasing fisheries pressure and other forms of impacts on deep sea ecosystems. The roughhead grenadier Macrourus berglax presents all the classical characteristics of a deep sea species, such as slow growth and low fecundity, which make them particularly vulnerable to anthropogenic impact, due to their low resilience to change. In this study, the population structure of the roughhead grenadier is investigated throughout its geographic distribution using two sets of molecular markers: a partial sequence of the Control Region of mitochondrial DNA and species-specific microsatellites. No evidence of significant structure was found throughout the North Atlantic, with both sets of molecular markers yielding the same results of overall homogeneity. We posit two non-mutually exclusive scenarios that can explain such outcome: i) substantial high gene flow among locations, possibly maintained by larval stages, ii) very large effective size of post-glacially expanded populations. The results can inform management strategies in this by-caught species, and contribute to the broader issue of biological connectivity in the deep ocean.

  19. The secret to successful deep-sea invasion: does low temperature hold the key?

    Directory of Open Access Journals (Sweden)

    Kathryn E Smith

    Full Text Available There is a general consensus that today's deep-sea biodiversity has largely resulted from recurrent invasions and speciations occurring through homogenous waters during periods of the Phanerozoic eon. Migrations likely continue today, primarily via isothermal water columns, such as those typical of Polar Regions, but the necessary ecological and physiological adaptations behind them are poorly understood. In an evolutionary context, understanding the adaptations, which allow for colonisation to high-pressure environments, may enable us to predict future events. In this investigation, we examine pressure tolerance during development, in the shallow-water neogastropod Buccinum undatum using thermally acclimated egg masses from temperate and sub-polar regions across the species range. Fossil records indicate neogastropods to have a deep-water origin, suggesting shallow-water species may be likely candidates for re-emergence into the deep sea. Our results show population level differences in physiological thresholds, which indicate low temperature acclimation to increase pressure tolerance. These findings imply this species is capable of deep-sea penetration through isothermal water columns prevailing at high latitudes. This study gives new insight into the fundamentals behind past and future colonisation events. Such knowledge is instrumental to understand better how changes in climate envelopes affect the distribution and radiation of species along latitudinal as well as bathymetric temperature gradients.

  20. Starvation and recovery in the deep-sea methanotroph Methyloprofundus sedimenti.

    Science.gov (United States)

    Tavormina, Patricia L; Kellermann, Matthias Y; Antony, Chakkiath Paul; Tocheva, Elitza I; Dalleska, Nathan F; Jensen, Ashley J; Valentine, David L; Hinrichs, Kai-Uwe; Jensen, Grant J; Dubilier, Nicole; Orphan, Victoria J

    2017-01-01

    In the deep ocean, the conversion of methane into derived carbon and energy drives the establishment of diverse faunal communities. Yet specific biological mechanisms underlying the introduction of methane-derived carbon into the food web remain poorly described, due to a lack of cultured representative deep-sea methanotrophic prokaryotes. Here, the response of the deep-sea aerobic methanotroph Methyloprofundus sedimenti to methane starvation and recovery was characterized. By combining lipid analysis, RNA analysis, and electron cryotomography, it was shown that M. sedimenti undergoes discrete cellular shifts in response to methane starvation, including changes in headgroup-specific fatty acid saturation levels, and reductions in cytoplasmic storage granules. Methane starvation is associated with a significant increase in the abundance of gene transcripts pertinent to methane oxidation. Methane reintroduction to starved cells stimulates a rapid, transient extracellular accumulation of methanol, revealing a way in which methane-derived carbon may be routed to community members. This study provides new understanding of methanotrophic responses to methane starvation and recovery, and lays the initial groundwork to develop Methyloprofundus as a model chemosynthesizing bacterium from the deep sea. © 2016 John Wiley & Sons Ltd.

  1. Difference of nitrogen-cycling microbes between shallow bay and deep-sea sediments in the South China Sea.

    Science.gov (United States)

    Yu, Tiantian; Li, Meng; Niu, Mingyang; Fan, Xibei; Liang, Wenyue; Wang, Fengping

    2018-01-01

    In marine sediments, microorganisms are known to play important roles in nitrogen cycling; however, the composition and quantity of microbes taking part in each process of nitrogen cycling are currently unclear. In this study, two different types of marine sediment samples (shallow bay and deep-sea sediments) in the South China Sea (SCS) were selected to investigate the microbial community involved in nitrogen cycling. The abundance and composition of prokaryotes and seven key functional genes involved in five processes of the nitrogen cycle [nitrogen fixation, nitrification, denitrification, dissimilatory nitrate reduction to ammonium (DNRA), and anaerobic ammonia oxidation (anammox)] were presented. The results showed that a higher abundance of denitrifiers was detected in shallow bay sediments, while a higher abundance of microbes involved in ammonia oxidation, anammox, and DNRA was found in the deep-sea sediments. Moreover, phylogenetic differentiation of bacterial amoA, nirS, nosZ, and nrfA sequences between the two types of sediments was also presented, suggesting environmental selection of microbes with the same geochemical functions but varying physiological properties.

  2. New species of the giant deep-sea isopod genus Bathynomus (Crustacea, Isopoda, Cirolanidae) from Hainan Island, South China Sea.

    Science.gov (United States)

    Kou, Qi; Chen, Jun; Li, Xinzheng; He, Lisheng; Wang, Yong

    2017-07-01

    Several specimens of the giant deep-sea isopod genus Bathynomus were collected by a deep-sea lander at a depth of 898 m near Hainan Island in the northern South China Sea. After careful examination, this material and the specimens collected from the Gulf of Aden, north-western Indian Ocean, previously reported as Bathynomus sp., were identified to be the same as a new species to the genus. Bathynomus jamesi sp. nov. can be distinguished from the congeners by: the distal margin of pleotelson with 11 or 13 short straight spines and central spine not bifid; uropodal endopod and exopod with distolateral corner slightly pronounced; clypeus with lateral margins concave; and antennal flagellum extending when extended posteriorly reaches the pereonite 3. In addition, Bathynomus jamesi sp. nov. is also supported by molecular analyses based on mitochondrial COI and 16S rRNA gene sequences. The distribution range of the new species includes the western Pacific and north-western Indian Ocean. © 2017 International Society of Zoological Sciences, Institute of Zoology/Chinese Academy of Sciences and John Wiley & Sons Australia, Ltd.

  3. Planktonic foraminifera from a quaternary deep sea core from the southern Arabian Sea

    Digital Repository Service at National Institute of Oceanography (India)

    Naidu, P.D.; Rao, P.S.; Pattan, J.N.

    An investigation on planktonic foraminifera and calcium carbonate content of a box core collected at a depth of 2556 m from the southern part of the Arabian sea indicates faunal changes depicting Quaternary climatic fluctuations. Based on the study...

  4. The Deep-Sea Microbial Community from the Amazonian Basin Associated with Oil Degradation.

    Science.gov (United States)

    Campeão, Mariana E; Reis, Luciana; Leomil, Luciana; de Oliveira, Louisi; Otsuki, Koko; Gardinali, Piero; Pelz, Oliver; Valle, Rogerio; Thompson, Fabiano L; Thompson, Cristiane C

    2017-01-01

    One consequence of oil production is the possibility of unplanned accidental oil spills; therefore, it is important to evaluate the potential of indigenous microorganisms (both prokaryotes and eukaryotes) from different oceanic basins to degrade oil. The aim of this study was to characterize the microbial response during the biodegradation process of Brazilian crude oil, both with and without the addition of the dispersant Corexit 9500, using deep-sea water samples from the Amazon equatorial margin basins, Foz do Amazonas and Barreirinhas, in the dark and at low temperatures (4°C). We collected deep-sea samples in the field (about 2570 m below the sea surface), transported the samples back to the laboratory under controlled environmental conditions (5°C in the dark) and subsequently performed two laboratory biodegradation experiments that used metagenomics supported by classical microbiological methods and chemical analysis to elucidate both taxonomic and functional microbial diversity. We also analyzed several physical-chemical and biological parameters related to oil biodegradation. The concomitant depletion of dissolved oxygen levels, oil droplet density characteristic to oil biodegradation, and BTEX concentration with an increase in microbial counts revealed that oil can be degraded by the autochthonous deep-sea microbial communities. Indigenous bacteria (e.g., Alteromonadaceae, Colwelliaceae , and Alcanivoracaceae ), archaea (e.g., Halobacteriaceae, Desulfurococcaceae , and Methanobacteriaceae ), and eukaryotic microbes (e.g., Microsporidia, Ascomycota, and Basidiomycota) from the Amazonian margin deep-sea water were involved in biodegradation of Brazilian crude oil within less than 48-days in both treatments, with and without dispersant, possibly transforming oil into microbial biomass that may fuel the marine food web.

  5. The Deep-Sea Microbial Community from the Amazonian Basin Associated with Oil Degradation

    Directory of Open Access Journals (Sweden)

    Mariana E. Campeão

    2017-06-01

    Full Text Available One consequence of oil production is the possibility of unplanned accidental oil spills; therefore, it is important to evaluate the potential of indigenous microorganisms (both prokaryotes and eukaryotes from different oceanic basins to degrade oil. The aim of this study was to characterize the microbial response during the biodegradation process of Brazilian crude oil, both with and without the addition of the dispersant Corexit 9500, using deep-sea water samples from the Amazon equatorial margin basins, Foz do Amazonas and Barreirinhas, in the dark and at low temperatures (4°C. We collected deep-sea samples in the field (about 2570 m below the sea surface, transported the samples back to the laboratory under controlled environmental conditions (5°C in the dark and subsequently performed two laboratory biodegradation experiments that used metagenomics supported by classical microbiological methods and chemical analysis to elucidate both taxonomic and functional microbial diversity. We also analyzed several physical–chemical and biological parameters related to oil biodegradation. The concomitant depletion of dissolved oxygen levels, oil droplet density characteristic to oil biodegradation, and BTEX concentration with an increase in microbial counts revealed that oil can be degraded by the autochthonous deep-sea microbial communities. Indigenous bacteria (e.g., Alteromonadaceae, Colwelliaceae, and Alcanivoracaceae, archaea (e.g., Halobacteriaceae, Desulfurococcaceae, and Methanobacteriaceae, and eukaryotic microbes (e.g., Microsporidia, Ascomycota, and Basidiomycota from the Amazonian margin deep-sea water were involved in biodegradation of Brazilian crude oil within less than 48-days in both treatments, with and without dispersant, possibly transforming oil into microbial biomass that may fuel the marine food web.

  6. Metagenomic Signatures of Microbial Communities in Deep-Sea Hydrothermal Sediments of Azores Vent Fields.

    Science.gov (United States)

    Cerqueira, Teresa; Barroso, Cristina; Froufe, Hugo; Egas, Conceição; Bettencourt, Raul

    2018-01-21

    The organisms inhabiting the deep-seafloor are known to play a crucial role in global biogeochemical cycles. Chemolithoautotrophic prokaryotes, which produce biomass from single carbon molecules, constitute the primary source of nutrition for the higher organisms, being critical for the sustainability of food webs and overall life in the deep-sea hydrothermal ecosystems. The present study investigates the metabolic profiles of chemolithoautotrophs inhabiting the sediments of Menez Gwen and Rainbow deep-sea vent fields, in the Mid-Atlantic Ridge. Differences in the microbial community structure might be reflecting the distinct depth, geology, and distance from vent of the studied sediments. A metagenomic sequencing approach was conducted to characterize the microbiome of the deep-sea hydrothermal sediments and the relevant metabolic pathways used by microbes. Both Menez Gwen and Rainbow metagenomes contained a significant number of genes involved in carbon fixation, revealing the largely autotrophic communities thriving in both sites. Carbon fixation at Menez Gwen site was predicted to occur mainly via the reductive tricarboxylic acid cycle, likely reflecting the dominance of sulfur-oxidizing Epsilonproteobacteria at this site, while different autotrophic pathways were identified at Rainbow site, in particular the Calvin-Benson-Bassham cycle. Chemolithotrophy appeared to be primarily driven by the oxidation of reduced sulfur compounds, whether through the SOX-dependent pathway at Menez Gwen site or through reverse sulfate reduction at Rainbow site. Other energy-yielding processes, such as methane, nitrite, or ammonia oxidation, were also detected but presumably contributing less to chemolithoautotrophy. This work furthers our knowledge of the microbial ecology of deep-sea hydrothermal sediments and represents an important repository of novel genes with potential biotechnological interest.

  7. How can we identify and communicate the ecological value of deep-sea ecosystem services?

    Directory of Open Access Journals (Sweden)

    Niels Jobstvogt

    Full Text Available Submarine canyons are considered biodiversity hotspots which have been identified for their important roles in connecting the deep sea with shallower waters. To date, a huge gap exists between the high importance that scientists associate with deep-sea ecosystem services and the communication of this knowledge to decision makers and to the wider public, who remain largely ignorant of the importance of these services. The connectivity and complexity of marine ecosystems makes knowledge transfer very challenging, and new communication tools are necessary to increase understanding of ecological values beyond the science community. We show how the Ecosystem Principles Approach, a method that explains the importance of ocean processes via easily understandable ecological principles, might overcome this challenge for deep-sea ecosystem services. Scientists were asked to help develop a list of clear and concise ecosystem principles for the functioning of submarine canyons through a Delphi process to facilitate future transfers of ecological knowledge. These ecosystem principles describe ecosystem processes, link such processes to ecosystem services, and provide spatial and temporal information on the connectivity between deep and shallow waters. They also elucidate unique characteristics of submarine canyons. Our Ecosystem Principles Approach was successful in integrating ecological information into the ecosystem services assessment process. It therefore has a high potential to be the next step towards a wider implementation of ecological values in marine planning. We believe that successful communication of ecological knowledge is the key to a wider public support for ocean conservation, and that this endeavour has to be driven by scientists in their own interest as major deep-sea stakeholders.

  8. How can we identify and communicate the ecological value of deep-sea ecosystem services?

    Science.gov (United States)

    Jobstvogt, Niels; Townsend, Michael; Witte, Ursula; Hanley, Nick

    2014-01-01

    Submarine canyons are considered biodiversity hotspots which have been identified for their important roles in connecting the deep sea with shallower waters. To date, a huge gap exists between the high importance that scientists associate with deep-sea ecosystem services and the communication of this knowledge to decision makers and to the wider public, who remain largely ignorant of the importance of these services. The connectivity and complexity of marine ecosystems makes knowledge transfer very challenging, and new communication tools are necessary to increase understanding of ecological values beyond the science community. We show how the Ecosystem Principles Approach, a method that explains the importance of ocean processes via easily understandable ecological principles, might overcome this challenge for deep-sea ecosystem services. Scientists were asked to help develop a list of clear and concise ecosystem principles for the functioning of submarine canyons through a Delphi process to facilitate future transfers of ecological knowledge. These ecosystem principles describe ecosystem processes, link such processes to ecosystem services, and provide spatial and temporal information on the connectivity between deep and shallow waters. They also elucidate unique characteristics of submarine canyons. Our Ecosystem Principles Approach was successful in integrating ecological information into the ecosystem services assessment process. It therefore has a high potential to be the next step towards a wider implementation of ecological values in marine planning. We believe that successful communication of ecological knowledge is the key to a wider public support for ocean conservation, and that this endeavour has to be driven by scientists in their own interest as major deep-sea stakeholders.

  9. Microbial community composition of deep-sea corals from the Red Sea provides insight into functional adaption to a unique environment

    KAUST Repository

    Rö thig, Till; Yum, Lauren; Kremb, Stephan Georg; Roik, Anna Krystyna; Voolstra, Christian R.

    2017-01-01

    Microbes associated with deep-sea corals remain poorly studied. The lack of symbiotic algae suggests that associated microbes may play a fundamental role in maintaining a viable coral host via acquisition and recycling of nutrients. Here we employed

  10. A comparative experimental approach to ecotoxicology in shallow-water and deep-sea holothurians suggests similar behavioural responses.

    Science.gov (United States)

    Brown, Alastair; Wright, Roseanna; Mevenkamp, Lisa; Hauton, Chris

    2017-10-01

    Exploration of deep-sea mineral resources is burgeoning, raising concerns regarding ecotoxicological impacts on deep-sea fauna. Assessing toxicity in deep-sea species is technologically challenging, which promotes interest in establishing shallow-water ecotoxicological proxy species. However, the effects of temperature and hydrostatic pressure on toxicity, and how adaptation to deep-sea environmental conditions might moderate these effects, are unknown. To address these uncertainties we assessed behavioural and physiological (antioxidant enzyme activity) responses to exposure to copper-spiked artificial sediments in a laboratory experiment using a shallow-water holothurian (Holothuria forskali), and in an in situ experiment using a deep-sea holothurian (Amperima sp.). Both species demonstrated sustained avoidance behaviour, evading contact with contaminated artificial sediment. However, A. sp. demonstrated sustained avoidance of 5mgl -1 copper-contaminated artificial sediment whereas H. forskali demonstrated only temporary avoidance of 5mgl -1 copper-contaminated artificial sediment, suggesting that H. forskali may be more tolerant of metal exposure over 96h. Nonetheless, the acute behavioural response appears consistent between the shallow-water species and the deep-sea species, suggesting that H. forskali may be a suitable ecotoxicological proxy for A. sp. in acute (≤24h) exposures, which may be representative of deep-sea mining impacts. No antioxidant response was observed in either species, which was interpreted to be the consequence of avoiding copper exposure. Although these data suggest that shallow-water taxa may be suitable ecotoxicological proxies for deep-sea taxa, differences in methodological and analytical approaches, and in sex and reproductive stage of experimental subjects, require caution in assessing the suitability of H. forskali as an ecotoxicological proxy for A. sp. Nonetheless, avoidance behaviour may have bioenergetic consequences that

  11. Proliferation and demise of deep-sea corals in the Mediterranean during the Younger Dryas

    International Nuclear Information System (INIS)

    McCulloch, Malcolm; Taviani, Marco; Lopez Correa, Matthias; Remia, Alessandro; Montagna, Paolo; Mortimer, Graham

    2010-01-01

    Uranium-series and radiocarbon ages are reported for deep-sea corals Madrepora oculata, Desmophyllum dianthus, Lophelia pertusa and Caryophyllia smithii from the Mediterranean Sea. U-series dating indicates that deep-sea corals have persisted in the Mediterranean for over 480, 000 years, especially during cool inter-stadial periods. The most prolific period of growth however appears to have occurred within the Younger Dryas (YD) period from 12, 900 to 11, 700 years BP followed by a short (∼ 330 years) phase of post-YD coral growth from 11, 230 to 10, 900 years BP. This indicates that deep-sea corals were prolific in the Mediterranean not only during the return to the more glacial-like conditions of the YD, but also following the rapid deglaciation and transition to warmer conditions that followed the end of the YD. Surprisingly, there is a paucity Last Glacial Maximum (LGM) coral ages, implying they were largely absent during this period when cold-water conditions were more prevalent. Radiocarbon ages show that the intermediate depth waters of the Mediterranean generally had Δ 14 C compositions similar to surface waters, indicating that these waters were extremely well ventilated. The only exception is a narrow period in the YD (12, 500 ± 100 years BP) when several samples of Lophelia pertusa from the Ionian Sea had Δ 14 C values falling significantly below the marine curve. Using a refined approach, isolation ages (T isol ) of 300 years to 500 years are estimated for these intermediate (800-1000 m) depth waters relative to surface marine waters, indicating a reduction or absence of deep-water formation in the Ionian and adjacent Adriatic Seas during the YD. Contrary to previous findings, we find no evidence for widespread intrusion of low Δ 14 C Atlantic waters into the Mediterranean. Prolific growth of deep-sea corals in the Mediterranean ended abruptly at ∼ 10, 900 years BP, with many of the coral-bearing mounds on the continental slopes being draped in

  12. Proliferation and demise of deep-sea corals in the Mediterranean during the Younger Dryas

    Energy Technology Data Exchange (ETDEWEB)

    McCulloch, Malcolm [ARC Centre of Excellence for Coral Reef Studies, School of Earth and Environment, The University of Western Australian, Crawley, 6009, Western Australia (Australia); Research School of Earth Sciences, Australian National University, Canberra, 0200 (Australia); Taviani, Marco; Lopez Correa, Matthias; Remia, Alessandro [ISMAR-CNR, via Gobetti 101, I-40129 Bologna (Italy); Montagna, Paolo [LSCE, Av. de la Terrasse, 91198 Gif-sur-Yvette, France, ISMAR-CNR, via Gobetti 101, I-40129 Bologna (Italy); Mortimer, Graham [Research School of Earth Sciences, Australian National University, Canberra, 0200 (Australia)

    2010-07-01

    Uranium-series and radiocarbon ages are reported for deep-sea corals Madrepora oculata, Desmophyllum dianthus, Lophelia pertusa and Caryophyllia smithii from the Mediterranean Sea. U-series dating indicates that deep-sea corals have persisted in the Mediterranean for over 480, 000 years, especially during cool inter-stadial periods. The most prolific period of growth however appears to have occurred within the Younger Dryas (YD) period from 12, 900 to 11, 700 years BP followed by a short ({approx} 330 years) phase of post-YD coral growth from 11, 230 to 10, 900 years BP. This indicates that deep-sea corals were prolific in the Mediterranean not only during the return to the more glacial-like conditions of the YD, but also following the rapid deglaciation and transition to warmer conditions that followed the end of the YD. Surprisingly, there is a paucity Last Glacial Maximum (LGM) coral ages, implying they were largely absent during this period when cold-water conditions were more prevalent. Radiocarbon ages show that the intermediate depth waters of the Mediterranean generally had {Delta}{sup 14}C compositions similar to surface waters, indicating that these waters were extremely well ventilated. The only exception is a narrow period in the YD (12, 500 {+-} 100 years BP) when several samples of Lophelia pertusa from the Ionian Sea had {Delta}{sup 14}C values falling significantly below the marine curve. Using a refined approach, isolation ages (T{sub isol}) of 300 years to 500 years are estimated for these intermediate (800-1000 m) depth waters relative to surface marine waters, indicating a reduction or absence of deep-water formation in the Ionian and adjacent Adriatic Seas during the YD. Contrary to previous findings, we find no evidence for widespread intrusion of low {Delta}{sup 14}C Atlantic waters into the Mediterranean. Prolific growth of deep-sea corals in the Mediterranean ended abruptly at {approx} 10, 900 years BP, with many of the coral-bearing mounds

  13. Global latitudinal species diversity gradient in deep-sea benthic foraminifera

    Science.gov (United States)

    Culver, Stephen J.; Buzas, Martin A.

    2000-02-01

    Global scale patterns of species diversity for modern deep-sea benthic foraminifera, an important component of the bathyal and abyssal meiofauna, are examined using comparable data from five studies in the Atlantic, ranging over 138° of latitude from the Norwegian Sea to the Weddell Sea. We show that a pattern of decreasing diversity with increasing latitude characterises both the North and South Atlantic. This pattern is confirmed for the northern hemisphere by independent data from the west-central North Atlantic and the Arctic basin. Species diversity in the North Atlantic northwards from the equator is variable until a sharp fall in the Norwegian Sea (ca. 65°N). In the South Atlantic species diversity drops from a maximum in latitudes less than 30°S and then decreases slightly from 40 to 70°S. For any given latitude, North Atlantic diversity is generally lower than in the South Atlantic. Both ecological and historical factors related to food supply are invoked to explain the formation and maintenance of the latitudinal gradient of deep-sea benthic foraminiferal species diversity. The gradient formed some 36 million years ago when global climatic cooling led to seasonally fluctuating food supply in higher latitudes.

  14. Southern Ocean Circulation: a High Resolution Examination of the Last Deglaciation from Deep-Sea Corals

    Science.gov (United States)

    Robinson, L. F.; Li, T.; Chen, T.; Burke, A.; Pegrum Haram, A.; Stewart, J.; Rae, J. W. B.; van de Flierdt, T.; Struve, T.; Wilson, D. J.

    2017-12-01

    Two decades ago it was first noted that the skeletal remains of deep-sea corals had the potential to provide absolutely dated archives of past ocean conditions. In the intervening twenty years this field has developed to the point where strategic collections and high throughput dating techniques now allow high resolution, well dated records of past deep sea behaviour to be produced. Likewise, efforts to improve understanding of biomineralisation and growth rates are leading to refinements in proxy tools useful for examining circulation, nutrient and carbon cycling, temperature and weathering processes. Deep-sea corals are particularly valuable archives in high latitude regions where radiocarbon-based age models are susceptible to large changes in surface reservoir ages. In this presentation we show new high resolution multiproxy records of the Southern Ocean (Drake Passage) made on U-Th dated corals spanning the last glacial cycle. With more than seventeen hundred reconnaissance ages, and around 200 precise isotope dilution U-Th ages, subtle changes in ocean behaviour can be identified during times of abrupt climate change. The geochemical signature of corals from the deepest sites, closest to modern day Lower Circumpolar Deep Waters, typically show a gradual shift from glacial to Holocene values during deglaciation, likely related to ventilation of the deep ocean. By contrast for the samples collected shallower in the water column (within sites currently bathed by Upper Circumpolar Deep Waters and Antarctic Intermediate and Mode Waters) the evidence points to a more complicated picture. Vertical zonation in the geochemical data suggests that periods of stratification are interspersed with mixing events within the upper 1500m of the water column. At the same time comparison to U-Th dated records from the low latitude Pacific and Atlantic points to an important role for the Southern Ocean in feeding the intermediate waters of both ocean basins throughout the

  15. Filling regulatory gaps in high seas fisheries: discrete high seas fish stocks, deep-sea fisheries and vulnerable marine ecosystems

    NARCIS (Netherlands)

    Takei, Y.

    2008-01-01

    The present study examines the legal regime of high seas fisheries with a view to identifying regulatory gaps. The main research questions are as follows: 1. What general principles are applicable to high seas fisheries?; 2. What implications do these general principles have for new challenges in

  16. Pineal organs of deep-sea fish: photopigments and structure.

    Science.gov (United States)

    Bowmaker, James K; Wagner, Hans-Joachim

    2004-06-01

    We have examined the morphology and photopigments of the pineal organs from a number of mesopelagic fish, including representatives of the hatchet fish (Sternoptychidae), scaly dragon-fish (Chauliodontidae) and bristlemouths (Gonostomidae). Although these fish were caught at depths of between 500 and 1000 m, the morphological organisation of their pineal organs is remarkably similar to that of surface-dwelling fish. Photoreceptor inner and outer segments protrude into the lumen of the pineal vesicle, and the outer segment is composed of a stack of up to 20 curved disks that form a cap-like cover over the inner segment. In all species, the pineal photopigment was spectrally distinct from the retinal rod pigment, with lambdamax displaced to longer wavelengths, between approximately 485 and 503 nm. We also investigated the pineal organ of the deep demersal eel, Synaphobranchus kaupi, caught at depths below 2000 m, which possesses a rod visual pigment with lambdamax at 478 nm, but the pineal pigment has lambdamax at approximately 515 nm. In one species of hatchet fish, Argyropelecus affinis, two spectral classes of pinealocyte were identified, both spectrally distinct from the retinal rod photopigment.

  17. Draft genome of bagasse-degrading bacteria Bacillus aryabhattai GZ03 from deep sea water.

    Science.gov (United States)

    Wen, Jian; Ren, Chong; Huang, Nan; Liu, Yang; Zeng, Runying

    2015-02-01

    Bacillus aryabhattai GZ03 was isolated from deep sea water of the South China Sea, which can produce glucose and fructose by degrading bagasse at 25 °C. Here we report the draft genome sequence of Bacillus aryabhattai GZ03. The data obtained revealed 37 contigs with genome size of 5,105,129 bp and G+C content of 38.09%. The draft genome of B. aryabhattai GZ03 may provide insights into the mechanism of microbial carbohydrate and lignocellulosic material degradation. Copyright © 2014 Elsevier B.V. All rights reserved.

  18. Distribution of artificial radionuclides in deep sediments of the Mediterranean Sea

    International Nuclear Information System (INIS)

    Garcia-Orellana, J.; Pates, J.M.; Masque, P.; Bruach, J.M.; Sanchez-Cabeza, J.A.

    2009-01-01

    Artificial radionuclides enter the Mediterranean Sea mainly through atmospheric deposition following nuclear weapons tests and the Chernobyl accident, but also through the river discharge of nuclear facility effluents. Previous studies of artificial radionuclides impact of the Mediterranean Sea have focussed on shallow, coastal sediments. However, deep sea sediments have the potential to store and accumulate pollutants, including artificial radionuclides. Deep sea marine sediment cores were collected from Mediterranean Sea abyssal plains (depth > 2000 m) and analysed for 239,240 Pu and 137 Cs to elucidate the concentrations, inventories and sources of these radionuclides in the deepest areas of the Mediterranean. The activity - depth profiles of 210 Pb, together with 14 C dating, indicate that sediment mixing redistributes the artificial radionuclides within the first 2.5 cm of the sedimentary column. The excess 210 Pb inventory was used to normalize 239,240 Pu and 137 Cs inventories for variable sediment fluxes. The 239,240 Pu/ 210 Pb xs ratio was uniform across the entire sea, with a mean value of 1.24 x 10 -3 , indicating homogeneous fallout of 239,240 Pu. The 137 Cs/ 210 Pb xs ratio showed differences between the eastern (0.049) and western basins (0.030), clearly significant impact of deep sea sediments from the Chernobyl accident. The inventory ratios of 239,240 Pu/ 137 Cs were 0.041 and 0.025 in the western and eastern basins respectively, greater than the fallout ratio, 0.021, showing more efficient scavenging of 239,240 Pu in the water column and major sedimentation of 137 Cs in the eastern basin. Although areas with water depths of > 2000 m constitute around 40% of the entire Mediterranean basin, the sediments in these regions only contained 2.7% of the 239,240 Pu and 0.95% of the 137 Cs deposited across the Sea in 2000. These data show that the accumulation of artificial radionuclides in deep Mediterranean environments is much lower than predicted by

  19. Iron oxide reduction in methane-rich deep Baltic Sea sediments

    DEFF Research Database (Denmark)

    Egger, Matthias; Hagens, Mathilde; Sapart, Celia J.

    2017-01-01

    /L transition. Our results reveal a complex interplay between production, oxidation and transport of methane showing that besides organoclastic Fe reduction, oxidation of downward migrating methane with Fe oxides may also explain the elevated concentrations of dissolved ferrous Fe in deep Baltic Sea sediments...... profiles and numerical modeling, we propose that a potential coupling between Fe oxide reduction and methane oxidation likely affects deep Fe cycling and related biogeochemical processes, such as burial of phosphorus, in systems subject to changes in organic matter loading or bottom water salinity....

  20. Bacterial Sulfate Reduction Above 100-Degrees-C in Deep-Sea Hydrothermal Vent Sediments

    DEFF Research Database (Denmark)

    JØRGENSEN, BB; ISAKSEN, MF; JANNASCH, HW

    1992-01-01

    -reducing bacteria was done in hot deep-sea sediments at the hydrothermal vents of the Guaymas Basin tectonic spreading center in the Gulf of California. Radiotracer studies revealed that sulfate reduction can occur at temperatures up to 110-degrees-C, with an optimum rate at 103-degrees to 106-degrees......-C. This observation expands the upper temperature limit of this process in deep-ocean sediments by 20-degrees-C and indicates the existence of an unknown groUp of hyperthermophilic bacteria with a potential importance for the biogeochemistry of sulfur above 100-degrees-C....

  1. Postcolonial partnerships: deep sea research, media coverage and (inter)national narratives on the Galathea Deep Sea Expedition from 1950 to 1952.

    Science.gov (United States)

    Nielsen, Kristian Hvidtfelt

    2010-03-01

    The Danish Galathea Deep Sea Expedition between 1950 and 1952 combined scientific and official objectives with the production of national and international narratives distributed through the daily press and other media. Dispatched by the Danish government on a newly acquired naval ship, the expedition undertook groundbreaking deep sea research while also devoting efforts to showing the flag, public communication of science, and international cooperation. The expedition was conceived after the war as a way in which to rehabilitate Denmark's reputation internationally and to rebuild national pride. To this end, the expedition included an onboard press section reporting the expedition to the Danish public and to an international audience. The press section mediated the favourable, post-war and postcolonial image of Denmark as an internationalist, scientific, modernizing and civilizing nation for which the expedition planners and many others were hoping. The expedition, therefore, was highly relevant to, indeed fed on, the emerging internationalist agenda in Denmark's foreign policy. Bringing out these aspects of the historical context of the expedition, this paper adds important perspectives to our knowledge about the expedition in particular and, more generally, about scientific exploration in the immediate post-war and postcolonial period.

  2. Studies of the reproductive biology of deep-sea megabenthos III. The deep-sea commensal species Epizoanthus paguriphilus (zoanthidea, anthozoa) and Parapagurus pilosimanus (paguroidea, crustacea)

    International Nuclear Information System (INIS)

    Muirhead, A.; Tyler, P.A.

    1984-01-01

    This report is the third in a series concerned with the biological processes of deep-sea megainvertebrates. The research programme aims to aid long term planning of nuclear waste disposal by providing information on the nature and rates of reproductive activities of deep sea invertebrates from several different phylogenetic groups. This information serves three functions:- Firstly, baseline information is provided concerning processes at or around the sediment/water interface. Secondly, knowledge of the actual mode of reproduction indicates the extent to which the biota could be involved in recycling leaked radioactive heavy metals to different areas of the environment via their reproductive processes. The third function fulfilled by this programme is to provide information on the rates at which these processes occur. Evaluation of these aspects of the life cycles of the megainvertebrates of a specific site will indicate the potential role of a large proportion of the biota inhabiting that site following leakage of dumped material. This report is concerned with the growth and modes of reproduction of a hermit crab, Parapagurus pilosimanus and the zoanthids Epizoanthus paguriphilus and E. abyssorum with which it lives at different depths of the N. Atlantic. (U.K.)

  3. Deep Sea Memory of High Atmospheric CO2 Concentration

    Science.gov (United States)

    Mathesius, Sabine; Hofmann, Matthias; Caldeira, Ken; Schellnhuber, Hans Joachim

    2015-04-01

    massive CDR interventions eventually bring down the global mean pH value to the RCP2.6 level, yet cannot restore a similarly homogenous distribution - while the pH of the upper ocean returns to the preindustrial value or even exceed it (in the 180 ppm scenario), the deep ocean remains acidified. The deep ocean is out of contact with the atmosphere and therefore unreachable by atmospheric CDR. Our results suggest that the proposition that the marine consequences of early emissions reductions are comparable to those of delayed reductions plus CDR is delusive and that a policy that allows for emitting CO2 today in the hopes of removing it tomorrow is bound to generate substantial regrets.

  4. Dioxin compounds in the deep-sea rose shrimp Aristeus antennatus (Risso, 1816) throughout the Mediterranean Sea

    Science.gov (United States)

    Rotllant, Guiomar; Abad, Esteban; Sardà, Francisco; Ábalos, Manuela; Company, Joan B.; Rivera, Josep

    2006-12-01

    Polychlorodibenzo- p-dioxins (PCDDs) and polychlorodibenzofurans (PCDFs) are among the more toxic anthropogenic contaminants. They are fat-soluble and accumulate in animal tissues. Exposure to PCDD/Fs can cause several endocrine, reproductive and developmental problems in animals, including human beings. Several studies have demonstrated that fish and invertebrates living in association with sediments are exposed to and accumulate contaminants, but to date there have been no studies of PCDD/Fs contamination in deep-sea regions. Specimens of Aristeus antennatus (Risso, 1816) were collected from depths of 600-2500 m at different points in the Mediterranean Sea, from the western basin off the coast of Barcelona to the central basin off the Peloponnesian Peninsula, with otter trawl gear. Amounts of PCDD/Fs were measured in different animal tissues by high resolution gas chromatography coupled to high resolution mass spectrometry (HRGC-HRMS). This is the first study to report the presence of PCDD/Fs in deep-sea organisms dwelling at depths below 600 m. A. antennatus presented levels of PCDD/Fs of the same order of magnitude, or slightly higher, as those found in shallow-water species ( Melicertus kerathurus) with respect to land-generated contamination. This highlights the widespread distribution of these pollutants and the potential threat posed to the biodiversity of fragile and vulnerable ecosystems such as the deep-sea. PCDD/F levels detected in the edible parts (muscle) of the commercial shrimp A. antennatus were clearly below the toxic limit value established by European legislation. Levels followed the trend muscle

  5. Major impacts of climate change on deep-sea benthic ecosystems

    Directory of Open Access Journals (Sweden)

    Andrew K. Sweetman

    2017-02-01

    Full Text Available The deep sea encompasses the largest ecosystems on Earth. Although poorly known, deep seafloor ecosystems provide services that are vitally important to the entire ocean and biosphere. Rising atmospheric greenhouse gases are bringing about significant changes in the environmental properties of the ocean realm in terms of water column oxygenation, temperature, pH and food supply, with concomitant impacts on deep-sea ecosystems. Projections suggest that abyssal (3000–6000 m ocean temperatures could increase by 1°C over the next 84 years, while abyssal seafloor habitats under areas of deep-water formation may experience reductions in water column oxygen concentrations by as much as 0.03 mL L–1 by 2100. Bathyal depths (200–3000 m worldwide will undergo the most significant reductions in pH in all oceans by the year 2100 (0.29 to 0.37 pH units. O2 concentrations will also decline in the bathyal NE Pacific and Southern Oceans, with losses up to 3.7% or more, especially at intermediate depths. Another important environmental parameter, the flux of particulate organic matter to the seafloor, is likely to decline significantly in most oceans, most notably in the abyssal and bathyal Indian Ocean where it is predicted to decrease by 40–55% by the end of the century. Unfortunately, how these major changes will affect deep-seafloor ecosystems is, in some cases, very poorly understood. In this paper, we provide a detailed overview of the impacts of these changing environmental parameters on deep-seafloor ecosystems that will most likely be seen by 2100 in continental margin, abyssal and polar settings. We also consider how these changes may combine with other anthropogenic stressors (e.g., fishing, mineral mining, oil and gas extraction to further impact deep-seafloor ecosystems and discuss the possible societal implications.

  6. Spontaneous and Widespread Electricity Generation in Natural Deep-Sea Hydrothermal Fields.

    Science.gov (United States)

    Yamamoto, Masahiro; Nakamura, Ryuhei; Kasaya, Takafumi; Kumagai, Hidenori; Suzuki, Katsuhiko; Takai, Ken

    2017-05-15

    Deep-sea hydrothermal vents discharge abundant reductive energy into oxidative seawater. Herein, we demonstrated that in situ measurements of redox potentials on the surfaces of active hydrothermal mineral deposits were more negative than the surrounding seawater potential, driving electrical current generation. We also demonstrated that negative potentials in the surface of minerals were widespread in the hydrothermal fields, regardless of the proximity to hydrothermal fluid discharges. Lab experiments verified that the negative potential of the mineral surface was induced by a distant electron transfer from the hydrothermal fluid through the metallic and catalytic properties of minerals. These results indicate that electric current is spontaneously and widely generated in natural mineral deposits in deep-sea hydrothermal fields. Our discovery provides important insights into the microbial communities that are supported by extracellular electron transfer and the prebiotic chemical and metabolic evolution of the ocean hydrothermal systems. © 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

  7. The complete mitochondrial genome of the deep-sea sponge Poecillastra laminaris (Astrophorida, Vulcanellidae).

    Science.gov (United States)

    Zeng, Cong; Thomas, Leighton J; Kelly, Michelle; Gardner, Jonathan P A

    2016-05-01

    The complete mitochondrial genome of a New Zealand specimen of the deep-sea sponge Poecillastra laminaris (Sollas, 1886) (Astrophorida, Vulcanellidae), from the Colville Ridge, New Zealand, was sequenced using the 454 Life Science pyrosequencing system. To identify homologous mitochondrial sequences, the 454 reads were mapped to the complete mitochondrial genome sequence of Geodia neptuni (GeneBank No. NC_006990). The P. laminaris genome is 18,413 bp in length and includes 14 protein-coding genes, 24 transfer RNA genes and 2 ribosomal RNA genes. Gene order resembled that of other demosponges. The base composition of the genome is A (29.1%), T (35.2%), C (14.0%) and G (21.7%). This is the second published mitogenome for a sponge of the order Astrophorida and will be useful in future phylogenetic analysis of deep-sea sponges.

  8. Predicting drivers and distributions of deep-sea ecosystems: A cold-water coral case study

    DEFF Research Database (Denmark)

    Mohn, Christian; Rengstorf, Anna; Brown, Colin

    2015-01-01

    pertusa as a case study (Rengstorf et al., 2014). The study shows that predictive models incorporating hydrodynamic variables perform significantly better than models based on terrain parameters only. They are a potentially powerful tool to improve our understanding of deep-sea ecosystem functioning......, facilitating species distribution modelling with high spatial detail. In this study, we used high resolution data (250 m grid size) from a newly developed hydrodynamic model to explore linkages between key physical drivers and occurrences of the cold-water coral Lophelia pertusa in selected areas of the NE...... and to provide decision support for marine spatial planning and conservation in the deep sea. Mohn et al., 2014.Linking benthic hydrodynamics and cold water coral occurrences: A high-resolution model study at three cold-water coral provinces in the NE Atlantic. Progress in Oceanography 122, 92-104. Rengstorf et...

  9. Paleocorrosion studies in deep sea sediments and the geological disposal of nuclear wastes

    International Nuclear Information System (INIS)

    Fehrenbach, L.; Maurette, M.; Guichard, F.; Havette, A.; Monaco, A.

    1984-01-01

    Uncertainties still surround assessment of the safety of disposal of nuclear wastes incorporated into 'radwaste' matrices. This is mostly due to the long time required for radioactive decay of 237 Np. The present work explores the usefulness of an experimental approach in 'paleocorrosion', which should help in minimizing such uncertainties. In this approach, polished sections of sediments containing high concentrations of natural analogues of radwaste matrices are subjected to element micromapping. Thus it is possible to characterize the long-term interactions of such analogues in their geological repositories, and to identify which generate reaction aureoles and protective and/or unprotective coatings. These analogues include grains incorporated in deep sea sediments (uraninite and quartz from the Oklo uranium ore deposit; volcanic ash particles; magnetic cosmic spherules). The present results indicate that uraninite should be a much more durable radwaste matrix than any type of glass in deep sea sediments. (orig./TWO)

  10. Geochemical records of salt-water inflows into the deep basins of the Baltic Sea

    DEFF Research Database (Denmark)

    Neumann, T.; Christiansen, C.; Clasen, S.

    1997-01-01

    The estuarine circulation system of the Baltic Sea promotes stable stratification and bottom water anoxia in sedimentary basins of the Baltic proper. Ingressions of saline, oxygen-rich waters from the North Sea replace the oxygen depleted deep water. Timing and extent of the ingressions vary...... on time-scales of years to decades, and are largely determined by wind-strength and storm frequency over the North Atlantic Ocean and Europe. Mn/Fe-ratios in sediments from a dated sediment core of the Gotland Deep (250 m water depth) record variations in redox conditions that can be linked to historical......-pressure areas over the North Atlantic in more recent times. The last three events have also been observed by hydrographic measurements. During the long time stagnation periods, Fe and Mn will be segregated into a particulate phase (iron sulfide) which accumulates at the seafloor and a dissolved phase (Mn2...

  11. Estimation of the iron loss in deep-sea permanent magnet motors considering seawater compressive stress.

    Science.gov (United States)

    Xu, Yongxiang; Wei, Yanyu; Zou, Jibin; Li, Jianjun; Qi, Wenjuan; Li, Yong

    2014-01-01

    Deep-sea permanent magnet motor equipped with fluid compensated pressure-tolerant system is compressed by the high pressure fluid both outside and inside. The induced stress distribution in stator core is significantly different from that in land type motor. Its effect on the magnetic properties of stator core is important for deep-sea motor designers but seldom reported. In this paper, the stress distribution in stator core, regarding the seawater compressive stress, is calculated by 2D finite element method (FEM). The effect of compressive stress on magnetic properties of electrical steel sheet, that is, permeability, BH curves, and BW curves, is also measured. Then, based on the measured magnetic properties and calculated stress distribution, the stator iron loss is estimated by stress-electromagnetics-coupling FEM. At last the estimation is verified by experiment. Both the calculated and measured results show that stator iron loss increases obviously with the seawater compressive stress.

  12. Estimation of the Iron Loss in Deep-Sea Permanent Magnet Motors considering Seawater Compressive Stress

    Directory of Open Access Journals (Sweden)

    Yongxiang Xu

    2014-01-01

    Full Text Available Deep-sea permanent magnet motor equipped with fluid compensated pressure-tolerant system is compressed by the high pressure fluid both outside and inside. The induced stress distribution in stator core is significantly different from that in land type motor. Its effect on the magnetic properties of stator core is important for deep-sea motor designers but seldom reported. In this paper, the stress distribution in stator core, regarding the seawater compressive stress, is calculated by 2D finite element method (FEM. The effect of compressive stress on magnetic properties of electrical steel sheet, that is, permeability, BH curves, and BW curves, is also measured. Then, based on the measured magnetic properties and calculated stress distribution, the stator iron loss is estimated by stress-electromagnetics-coupling FEM. At last the estimation is verified by experiment. Both the calculated and measured results show that stator iron loss increases obviously with the seawater compressive stress.

  13. Scientific Encounters of the Mysterious Sea. Reading Activities That Explore the Mysterious Creatures of the Deep Blue Sea. Grades 4-7.

    Science.gov (United States)

    Embry, Lynn

    This activity book presents reading activities for grades 4-7 exploring the mysterious creatures of the deep sea. The creatures include: angel sharks; argonauts; barberfish; comb jelly; croakers; electric rays; flying fish; giganturid; lantern fish; narwhals; northern basket starfish; ocean sunfish; Portuguese man-of-war; sea cucumbers; sea…

  14. Conquered from the deep sea? A new deep-sea isopod species from the Antarctic shelf shows pattern of recent colonization.

    Directory of Open Access Journals (Sweden)

    Torben Riehl

    Full Text Available The Amundsen Sea, Antarctica, is amongst the most rapidly changing environments of the world. Its benthic inhabitants are barely known and the BIOPEARL 2 project was one of the first to biologically explore this region. Collected during this expedition, Macrostylis roaldi sp. nov. is described as the first isopod discovered on the Amundsen-Sea shelf. Amongst many characteristic features, the most obvious characters unique for M. roaldi are the rather short pleotelson and short operculum as well as the trapezoid shape of the pleotelson in adult males. We used DNA barcodes (COI and additional mitochondrial markers (12S, 16S to reciprocally illuminate morphological results and nucleotide variability. In contrast to many other deep-sea isopods, this species is common and shows a wide distribution. Its range spreads from Pine Island Bay at inner shelf right to the shelf break and across 1,000 m bathymetrically. Its gene pool is homogenized across space and depth. This is indicative for a genetic bottleneck or a recent colonization history. Our results suggest further that migratory or dispersal capabilities of some species of brooding macrobenthos have been underestimated. This might be relevant for the species' potential to cope with effects of climate change. To determine where this species could have survived the last glacial period, alternative refuge possibilities are discussed.

  15. The contribution of deep-sea macrohabitat heterogeneity to global nematode diversity

    Digital Repository Service at National Institute of Oceanography (India)

    Vanreusel, A.; Fonseca, G.; Danovaro, R.; DaSilva, M.C.; Esteves, A.M.; Ferrero, T.; Gad, G.; Galtsova, V.; Gambi, C.; Genevois, V.F.; Ingels, J.; Ingole, B.S.; Lampadariou, N.; Merckx, B.; Miljutina, M.; Muthumbi, A.; Netto, S.; Portnova, D.; Radziejewska, T.; Raes, M.; Tchesunov, A.; Vanaverbeke, J.; Van Gaever, S.; Venekey, V.; Bezerra, T.N.; Flint, H; Copley, J.; Pape, E; Zeppilli, D.; Martinez, P.A.; Galeron, J.

    An edited version of this paper was published by Blackwell Verlag GmbH. Copyright [2010] Abstract : The great variety of geological and hydrological settings in the deep-sea generates many different habitats, some of them only recently explored whereas... were assumed to be the main driving factors for differences in benthic standing stock, biodiversity and community composition of the benthos (Grassle, 1989; Gage and Tyler, 1991). However, through increasing exploration by means of bathymetric...

  16. Alterations in geochemical associations in artificially disturbed deep-sea sediments

    Digital Repository Service at National Institute of Oceanography (India)

    Nath, B.N.; Parthiban, G.; Banaulikar, S.; Sarkar, S.

    Alterations in Geochemical Associations in Artificially Disturbed Deep-Sea Sediments B. NAGENDER NATH, G. PARTHIBAN, AND S. BANAULIKAR National Institute of Oceanography, Dona Paula, Goa, India SUBHADEEP SARKAR Department of Geology and Geophysics, Indian... the lithogenic component by transporting it from other locations within the Basin during commercial mining operations. Keywords manganese nodule mining, artificial benthic disturbance experiment, environmental impact assessment, metals Trace metals in marine...

  17. The Current State of Global Activities Related to Deep-sea Mineral Exploration and Mining

    OpenAIRE

    Petersen, Sven; Krätschell, Anna; Hannington, Mark D.

    2016-01-01

    Deep-sea mining is seen as a potential way to provide future secure metal supply to global markets. The current rush to the seafloor in areas beyond national jurisdiction indicates that sound knowledge of the geological characteritics of the various commodities, a realistic resource assessment, and a social and political discussion about the cons and pros of their exploitation that is based on facts, not myths, is required. This contribution provides the most recent information on...

  18. Distribution of deep-sea benthos in the proposed mining area of Central Indian Basin

    Digital Repository Service at National Institute of Oceanography (India)

    Ansari, Z.A.

    . 1997. Imediate response of benthic meio and megafauna to disturbancecaused by polymetallic nodule miner simulator. Proceedings,International Symposiumon Environmental Studies for Deep-Sea Mining, Tokyo,Japan,November 20–21. Pp.223–235.Reghukumar... in the western Pacific in rela-tion to environmental factors. Oceanologia Acta7:113–121. Shirayama,Y.,and T. Fukushima. 1997. Response of a meiobenthic community to rapidresedimentation. In:Proceedings,International Symposium on Environmental Studies for...

  19. Structure elucidation of the new citharoxazole from the Mediterranean deep-sea sponge Latrunculia (Biannulata) citharistae.

    Science.gov (United States)

    Genta-Jouve, Grégory; Francezon, Nellie; Puissant, Alexandre; Auberger, Patrick; Vacelet, Jean; Pérez, Thierry; Fontana, Angelo; Mourabit, Ali Al; Thomas, Olivier P

    2011-08-01

    Citharoxazole (1), a new batzelline derivative featuring a benzoxazole moiety, was isolated from the Mediterranean deep-sea sponge Latrunculia (Biannulata) citharistae Vacelet, 1969, together with the known batzelline C (2). This is the first chemical study of a Mediterranean Latrunculia species and the benzoxazole moiety is unprecedented for this family of marine natural products. The structure was mainly elucidated by the interpretation of NMR spectra and especially HMBC correlations. Copyright © 2011 John Wiley & Sons, Ltd.

  20. Life on wood - the carnivorous deep-sea mussel Idas argenteus (Bathymodiolinae, Mytilidae, Bivalvia

    DEFF Research Database (Denmark)

    Ockelmann, Kurt W.; Dinesen, Grete E.

    2011-01-01

    to an ephemeral habitat in the deep sea of both species are described herein. Although larviphagi is known to occur in some filter-feeding bivalves, Idas argenteus is the first mytilid known to be specifically adapted to a carnivorous life. Further, it is argued that the modifications of I. argenteus with regard...... to its shell development, alimentary system, gill anatomy and life habits provide important clues to the evolution of the Bathymodiolinae....

  1. High levels of natural radionuclides in a deep-sea infaunal xenophyophore

    Energy Technology Data Exchange (ETDEWEB)

    Swinbanks, D D; Shirayama, Y

    1986-03-27

    The paper concerns the high levels of natural radionuclides in a deep-sea infaunal xenophyophore from the Izu-Ogasawara Trench. Measured /sup 210/Po activities and barium contents of various parts of Occultammina profunda and the surrounding sediment are given, together with their estimated /sup 210/Pb and /sup 226/Ra activities. The data suggest that xenophyphores are probably subject to unusually high levels of natural radiation.

  2. Shelf erosion and submarine river canyons: implications for deep-sea oxygenation and ocean productivity during glaciation

    Directory of Open Access Journals (Sweden)

    I. Tsandev

    2010-06-01

    Full Text Available The areal exposure of continental shelves during glacial sea level lowering enhanced the transfer of erodible reactive organic matter to the open ocean. Sea level fall also activated submarine canyons thereby allowing large rivers to deposit their particulate load, via gravity flows, directly in the deep-sea. Here, we analyze the effects of shelf erosion and particulate matter re-routing to the open ocean during interglacial to glacial transitions, using a coupled model of the marine phosphorus, organic carbon and oxygen cycles. The results indicate that shelf erosion and submarine canyon formation may significantly lower deep-sea oxygen levels, by up to 25%, during sea level low stands, mainly due to the supply of new material from the shelves, and to a lesser extent due to particulate organic matter bypassing the coastal zone. Our simulations imply that deep-sea oxygen levels can drop significantly if eroded shelf material is deposited to the seafloor. Thus the glacial ocean's oxygen content could have been significantly lower than during interglacial stages. Primary production, organic carbon burial and dissolved phosphorus inventories are all affected by the erosion and rerouting mechanisms. However, re-routing of the continental and eroded shelf material to the deep-sea has the effect of decoupling deep-sea oxygen demand from primary productivity in the open ocean. P burial is also not affected showing a disconnection between the biogeochemical cycles in the water column and the P burial record.

  3. Ecosystem Services: a Framework for Environmental Management of the Deep Sea

    Science.gov (United States)

    Le, J. T.; Levin, L. A.; Carson, R. T.

    2016-02-01

    As demand for deep-sea resources rapidly expands in the food, energy, mineral, and pharmaceutical sectors, it has become increasingly clear that a regulatory structure for extracting these resources is not yet in place. There are jurisdictional gaps and a lack of regulatory consistency regarding what aspects of the deep sea need protection and what requirements might help guarantee that protection. Given the mining sector's intent to exploit seafloor massive sulphides, Mn nodules, cobalt crusts, and phosphorites in the coming years, there is an urgent need for deep-ocean environmental management. Here, we propose an ecosystem services-based framework to inform decisions and best practices regarding resource exploitation, and to guide baseline studies, preventative actions, monitoring, and remediation. With policy in early stages of development, an ecosystem services approach has the potential to serve as an overarching framework that takes protection of natural capital provided by the environment into account during the decision-making process. We show how an ecosystem services approach combined with economic tools, such as benefit transfer techniques, should help illuminate issues where there are direct conflicts among different industries, and between industry and conservation. We argue for baseline and monitoring measurements and metrics that inform about deep-sea ecosystem services that would be impaired by mining, and discuss ways to incorporate the value of those losses into decision making, mitigation measures, and ultimately product costs. This proposal is considered relative to current International Seabed Authority recommendations and contractor practices, and new actions are proposed. An ecosystem services-based understanding of how these systems work and their value to society can improve sustainability and stewardship of the deep ocean.

  4. First biological measurements of deep-sea corals from the Red Sea.

    KAUST Repository

    Roder, Cornelia; Berumen, Michael L.; Bouwmeester, J; Papathanassiou, E; Al-Suwailem, Abdulaziz M.; Voolstra, Christian R.

    2013-01-01

    from the central Red Sea, where they occur at temperatures exceeding 20°C in highly oligotrophic and oxygen-limited waters. Low respiration rates, low calcification rates, and minimized tissue cover indicate that a reduced metabolism is one of the key

  5. The past, present and future distribution of a deep-sea shrimp in the Southern Ocean

    Directory of Open Access Journals (Sweden)

    Zeenatul Basher

    2016-02-01

    Full Text Available Shrimps have a widespread distribution across the shelf, slope and seamount regions of the Southern Ocean. Studies of Antarctic organisms have shown that individual species and higher taxa display different degrees of sensitivity and adaptability in response to environmental change. We use species distribution models to predict changes in the geographic range of the deep-sea Antarctic shrimp Nematocarcinus lanceopes under changing climatic conditions from the Last Glacial Maximum to the present and to the year 2100. The present distribution range indicates a pole-ward shift of the shrimp population since the last glaciation. This occurred by colonization of slopes from nearby refugia located around the northern part of Scotia Arc, southern tip of South America, South Georgia, Bouvet Island, southern tip of the Campbell plateau and Kerguelen plateau. By 2100, the shrimp are likely to expand their distribution in east Antarctica but have a continued pole-ward contraction in west Antarctica. The range extension and contraction process followed by the deep-sea shrimp provide a geographic context of how other deep-sea Antarctic species may have survived during the last glaciation and may endure with projected changing climatic conditions in the future.

  6. Diversity of Micromonospora strains from the deep Mediterranean Sea and their potential to produce bioactive compounds

    Directory of Open Access Journals (Sweden)

    Andrea Gärtner

    2016-06-01

    Full Text Available During studies on bacteria from the Eastern Mediterranean deep-sea, incubation under in situ conditions (salinity, temperature and pressure and heat treatment were used to selectively enrich representatives of Micromonospora. From sediments of the Ierapetra Basin (4400 m depth and the Herodotos Plain (2800 m depth, 21 isolates were identified as members of the genus Micromonospora. According to phylogenetic analysis of 16S rRNA gene sequences, the Micromonospora isolates could be assigned to 14 different phylotypes with an exclusion limit of ≥ 99.5% sequence similarity. They formed 7 phylogenetic clusters. Two of these clusters, which contain isolates obtained after enrichment under pressure incubation and phylogenetically are distinct from representative reference organism, could represent bacteria specifically adapted to the conditions in situ and to life in these deep-sea sediments. The majority of the Micromonospora isolates (90% contained at least one gene cluster for biosynthesis of secondary metabolites for non-ribosomal polypeptides and polyketides (polyketide synthases type I and type II. The determination of biological activities of culture extracts revealed that almost half of the strains produced substances inhibitory to the growth of Gram-positive bacteria. Chemical analyses of culture extracts demonstrated the presence of different metabolite profiles also in closely related strains. Therefore, deep-sea Micromonospora isolates are considered to have a large potential for the production of new antibiotic compounds.

  7. The detection of magnetotactic bacteria in deep sea sediments from the east Pacific Manganese Nodule Province.

    Science.gov (United States)

    Dong, Yi; Li, Jinhua; Zhang, Wuchang; Zhang, Wenyan; Zhao, Yuan; Xiao, Tian; Wu, Long-Fei; Pan, Hongmiao

    2016-04-01

    Magnetotactic bacteria (MTB) are distributed ubiquitously in sediments from coastal environments to the deep sea. The Pacific Manganese Nodule Province contains numerous polymetallic nodules mainly composed of manganese, iron, cobalt, copper and nickel. In the present study we used Illumina MiSeq sequencing technology to assess the communities of putative MTB in deep sea surface sediments at nine stations in the east Pacific Manganese Nodule Province. A total of 402 sequence reads from MTB were classified into six operational taxonomic units (OTUs). Among these, OTU113 and OTU759 were affiliated with the genus Magnetospira, OTU2224 and OTU2794 were affiliated with the genus Magnetococcus and Magnetovibrio, respectively, OTU3017 had no known genus affiliation, and OTU2556 was most similar to Candidatus Magnetananas. Interestingly, OTU759 was widely distributed, occurring at all study sites. Magnetism measurements revealed that all sediments were dominated by low coercivity, non-interacting single domain magnetic minerals. Transmission electron microscopy confirmed that the magnetic minerals were magnetosomes. Our data suggest that diverse putative MTB are widely distributed in deep sea surface sediments from the east Pacific Manganese Nodule Province. © 2016 Society for Applied Microbiology and John Wiley & Sons Ltd.

  8. Recent developments in the thermophilic microbiology of deep-sea hydrothermal vents.

    Science.gov (United States)

    Miroshnichenko, Margarita L; Bonch-Osmolovskaya, Elizaveta A

    2006-04-01

    The diversity of thermophilic prokaryotes inhabiting deep-sea hot vents was actively studied over the last two decades. The ever growing interest is reflected in the exponentially increasing number of novel thermophilic genera described. The goal of this paper is to survey the progress in this field made in the years 2000-2005. In this period, representatives of several new taxa of hyperthermophilic archaea were obtained from deep-sea environments. Two of these isolates had phenotypic features new for this group of organisms: the presence of an outer cell membrane (the genus Ignicoccus) and the ability to grow anaerobically with acetate and ferric iron (the genus Geoglobus). Also, our knowledge on the diversity of thermophilic bacteria from deep-sea thermal environments extended significantly. The new bacterial isolates represented diverse bacterial divisions: the phylum Aquificae, the subclass Epsilonproteobacteria, the order Thermotogales, the families Thermodesulfobacteriaceae, Deferribacteraceae, and Thermaceae, and a novel bacterial phylum represented by the genus Caldithrix. Most of these isolates are obligate or facultative lithotrophs, oxidizing molecular hydrogen in the course of different types of anaerobic respiration or microaerobic growth. The existence and significant ecological role of some of new bacterial thermophilic isolates was initially established by molecular methods.

  9. Bacterial community diversity of the deep-sea octocoral Paramuricea placomus

    Directory of Open Access Journals (Sweden)

    Christina A. Kellogg

    2016-09-01

    Full Text Available Compared to tropical corals, much less is known about deep-sea coral biology and ecology. Although the microbial communities of some deep-sea corals have been described, this is the first study to characterize the bacterial community associated with the deep-sea octocoral, Paramuricea placomus. Samples from five colonies of P. placomus were collected from Baltimore Canyon (379–382 m depth in the Atlantic Ocean off the east coast of the United States of America. DNA was extracted from the coral samples and 16S rRNA gene amplicons were pyrosequenced using V4-V5 primers. Three samples sequenced deeply (>4,000 sequences each and were further analyzed. The dominant microbial phylum was Proteobacteria, but other major phyla included Firmicutes and Planctomycetes. A conserved community of bacterial taxa held in common across the three P. placomus colonies was identified, comprising 68–90% of the total bacterial community depending on the coral individual. The bacterial community of P. placomus does not appear to include the genus Endozoicomonas, which has been found previously to be the dominant bacterial associate in several temperate and tropical gorgonians. Inferred functionality suggests the possibility of nitrogen cycling by the core bacterial community.

  10. Predictive modeling of deep-sea fish distribution in the Azores

    Science.gov (United States)

    Parra, Hugo E.; Pham, Christopher K.; Menezes, Gui M.; Rosa, Alexandra; Tempera, Fernando; Morato, Telmo

    2017-11-01

    Understanding the link between fish and their habitat is essential for an ecosystem approach to fisheries management. However, determining such relationship is challenging, especially for deep-sea species. In this study, we applied generalized additive models (GAMs) to relate presence-absence and relative abundance data of eight economically-important fish species to environmental variables (depth, slope, aspect, substrate type, bottom temperature, salinity and oxygen saturation). We combined 13 years of catch data collected from systematic longline surveys performed across the region. Overall, presence-absence GAMs performed better than abundance models and predictions made for the observed data successfully predicted the occurrence of the eight deep-sea fish species. Depth was the most influential predictor of all fish species occurrence and abundance distributions, whereas other factors were found to be significant for some species but did not show such a clear influence. Our results predicted that despite the extensive Azores EEZ, the habitats available for the studied deep-sea fish species are highly limited and patchy, restricted to seamounts slopes and summits, offshore banks and island slopes. Despite some identified limitations, our GAMs provide an improved knowledge of the spatial distribution of these commercially important fish species in the region.

  11. DeepPIV: Particle image velocimetry measurements using deep-sea, remotely operated vehicles

    Science.gov (United States)

    Katija, Kakani; Sherman, Alana; Graves, Dale; Klimov, Denis; Kecy, Chad; Robison, Bruce

    2015-11-01

    The midwater region of the ocean (below the euphotic zone and above the benthos) is one of the largest ecosystems on our planet, yet remains one of the least explored. Little-known marine organisms that inhabit midwater have developed life strategies that contribute to their evolutionary success, and may inspire engineering solutions for societally relevant challenges. Although significant advances in underwater vehicle technologies have improved access to midwater, small-scale, in situ fluid mechanics measurement methods that seek to quantify the interactions that midwater organisms have with their physical environment are lacking. Here we present DeepPIV, an instrumentation package affixed to remotely operated vehicles that quantifies fluid motions from the surface of the ocean down to 4000 m depths. Utilizing ambient suspended particulate, fluid-structure interactions are evaluated on a range of marine organisms in midwater. Initial science targets include larvaceans, biological equivalents of flapping flexible foils, that create mucus houses to filter food. Little is known about the structure of these mucus houses and the function they play in selectively filtering particles, and these dynamics can serve as particle-mucus models for human health. Using DeepPIV, we reveal the complex structures and flows generated within larvacean mucus houses, and elucidate how these structures function. Funding is gratefully acknowledged from the Packard Foundation.

  12. Cathodic protection of mild steel and copper in deep waters of the Arabian Sea and Bay of Bengal

    Digital Repository Service at National Institute of Oceanography (India)

    Sawant, S.S.; Venkat, K.; Wagh, A.B.

    Performance of cathodic protection system to mild steel and copper in deep (> 1000 m) oceanic waters of the Arabian Sea and Bay of Bengal has been assessed using aluminium and mild steel sacrificial anodes. The corrosion rates of unprotected metals...

  13. Metabolic profiles of prokaryotic and eukaryotic communities in deep-sea sponge Neamphius huxleyi indicated by metagenomics

    Science.gov (United States)

    Li, Zhi-Yong; Wang, Yue-Zhu; He, Li-Ming; Zheng, Hua-Jun

    2014-01-01

    The whole metabolism of a sponge holobiont and the respective contributions of prokaryotic and eukaryotic symbionts and their associations with the sponge host remain largely unclear. Meanwhile, compared with shallow water sponges, deep-sea sponges are rarely understood. Here we report the metagenomic exploration of deep-sea sponge Neamphius huxleyi at the whole community level. Metagenomic data showed phylogenetically diverse prokaryotes and eukaryotes in Neamphius huxleyi. MEGAN and gene enrichment analyses indicated different metabolic potentials of prokaryotic symbionts from eukaryotic symbionts, especially in nitrogen and carbon metabolisms, and their molecular interactions with the sponge host. These results supported the hypothesis that prokaryotic and eukaryotic symbionts have different ecological roles and relationships with sponge host. Moreover, vigorous denitrification, and CO2 fixation by chemoautotrophic prokaryotes were suggested for this deep-sea sponge. The study provided novel insights into the respective potentials of prokaryotic and eukaryotic symbionts and their associations with deep-sea sponge Neamphius huxleyi. PMID:24463735

  14. Metabolic profiles of prokaryotic and eukaryotic communities in deep-sea sponge Neamphius huxleyi [corrected]. indicated by metagenomics.

    Science.gov (United States)

    Li, Zhi-Yong; Wang, Yue-Zhu; He, Li-Ming; Zheng, Hua-Jun

    2014-01-27

    The whole metabolism of a sponge holobiont and the respective contributions of prokaryotic and eukaryotic symbionts and their associations with the sponge host remain largely unclear. Meanwhile, compared with shallow water sponges, deep-sea sponges are rarely understood. Here we report the metagenomic exploration of deep-sea sponge Neamphius huxleyi [corrected] . at the whole community level. Metagenomic data showed phylogenetically diverse prokaryotes and eukaryotes in Neamphius huxleyi [corrected]. MEGAN and gene enrichment analyses indicated different metabolic potentials of prokaryotic symbionts from eukaryotic symbionts, especially in nitrogen and carbon metabolisms, and their molecular interactions with the sponge host. These results supported the hypothesis that prokaryotic and eukaryotic symbionts have different ecological roles and relationships with sponge host. Moreover, vigorous denitrification, and CO2 fixation by chemoautotrophic prokaryotes were suggested for this deep-sea sponge. The study provided novel insights into the respective potentials of prokaryotic and eukaryotic symbionts and their associations with deep-sea sponge Neamphius huxleyi [corrected].

  15. Metabolic profiles of prokaryotic and eukaryotic communities in deep-sea sponge Lamellomorpha sp. indicated by metagenomics

    Science.gov (United States)

    Li, Zhi-Yong; Wang, Yue-Zhu; He, Li-Ming; Zheng, Hua-Jun

    2014-01-01

    The whole metabolism of a sponge holobiont and the respective contributions of prokaryotic and eukaryotic symbionts and their associations with the sponge host remain largely unclear. Meanwhile, compared with shallow water sponges, deep-sea sponges are rarely understood. Here we report the metagenomic exploration of deep-sea sponge Lamellomorpha sp. at the whole community level. Metagenomic data showed phylogenetically diverse prokaryotes and eukaryotes in Lamellomorpha sp.. MEGAN and gene enrichment analyses indicated different metabolic potentials of prokaryotic symbionts from eukaryotic symbionts, especially in nitrogen and carbon metabolisms, and their molecular interactions with the sponge host. These results supported the hypothesis that prokaryotic and eukaryotic symbionts have different ecological roles and relationships with sponge host. Moreover, vigorous denitrification, and CO2 fixation by chemoautotrophic prokaryotes were suggested for this deep-sea sponge. The study provided novel insights into the respective potentials of prokaryotic and eukaryotic symbionts and their associations with deep-sea sponge Lamellomorpha sp..

  16. The design of an acoustic data link for a deep-sea probe

    International Nuclear Information System (INIS)

    Coates, R.; Mathams, R.F.; Owens, A.R.

    1986-01-01

    The report describes a digital computer simulation of the performance of possible acoustic digital data link designs for use with a deep ocean penetrometer. It concludes with a description of the acoustic and electronic parts of a prototype system. The digital computer was developed with the assumption that the transmitter would need to be able to pass a low error rate data signal vertically upwards through some tens of metres of sea-bed sediment as well as some thousands of metres of sea water. The model allowed for variability in sediment attenuation, sea-state, transmitter power and modulation technique. It was concluded that, at acceptable transmitter powers, a useable signal should be recoverable under all expected environmental conditions. The prototype system was built and tested in laboratory conditions. The tests indicated that satisfactory performance should be achievable with a field equipment derived from this prototype. (author)

  17. The Biological Deep Sea Hydrothermal Vent as a Model to Study Carbon Dioxide Capturing Enzymes

    Directory of Open Access Journals (Sweden)

    Premila D. Thongbam

    2011-04-01

    Full Text Available Deep sea hydrothermal vents are located along the mid-ocean ridge system, near volcanically active areas, where tectonic plates are moving away from each other. Sea water penetrates the fissures of the volcanic bed and is heated by magma. This heated sea water rises to the surface dissolving large amounts of minerals which provide a source of energy and nutrients to chemoautotrophic organisms. Although this environment is characterized by extreme conditions (high temperature, high pressure, chemical toxicity, acidic pH and absence of photosynthesis a diversity of microorganisms and many animal species are specially adapted to this hostile environment. These organisms have developed a very efficient metabolism for the assimilation of inorganic CO2 from the external environment. In order to develop technology for the capture of carbon dioxide to reduce greenhouse gases in the atmosphere, enzymes involved in CO2 fixation and assimilation might be very useful. This review describes some current research concerning CO2 fixation and assimilation in the deep sea environment and possible biotechnological application of enzymes for carbon dioxide capture.

  18. Zonation of Microbial Communities by a Hydrothermal Mound in the Atlantis II Deep (the Red Sea)

    KAUST Repository

    Wang, Yong; Li, Jiang Tao; He, Li Sheng; Yang, Bo; Gao, Zhao Ming; Cao, Hui Luo; Batang, Zenon B.; Al-Suwailem, Abdulaziz M.; Qian, Pei-Yuan

    2015-01-01

    In deep-sea geothermal rift zones, the dispersal of hydrothermal fluids of moderately-high temperatures typically forms subseafloor mounds. Major mineral components of the crust covering the mound are barite and metal sulfides. As a result of the continental rifting along the Red Sea, metalliferous sediments accumulate on the seafloor of the Atlantis II Deep. In the present study, a barite crust was identified in a sediment core from the Atlantis II Deep, indicating the formation of a hydrothermal mound at the sampling site. Here, we examined how such a dense barite crust could affect the local environment and the distribution of microbial inhabitants. Our results demonstrate distinctive features of mineral components and microbial communities in the sediment layers separated by the barite crust. Within the mound, archaea accounted for 65% of the community. In contrast, the sediments above the barite boundary were overwhelmed by bacteria. The composition of microbial communities under the mound was similar to that in the sediments of the nearby Discovery Deep and marine cold seeps. This work reveals the zonation of microbial communities after the formation of the hydrothermal mound in the subsurface sediments of the rift basin.

  19. Zonation of Microbial Communities by a Hydrothermal Mound in the Atlantis II Deep (the Red Sea)

    KAUST Repository

    Wang, Yong

    2015-10-20

    In deep-sea geothermal rift zones, the dispersal of hydrothermal fluids of moderately-high temperatures typically forms subseafloor mounds. Major mineral components of the crust covering the mound are barite and metal sulfides. As a result of the continental rifting along the Red Sea, metalliferous sediments accumulate on the seafloor of the Atlantis II Deep. In the present study, a barite crust was identified in a sediment core from the Atlantis II Deep, indicating the formation of a hydrothermal mound at the sampling site. Here, we examined how such a dense barite crust could affect the local environment and the distribution of microbial inhabitants. Our results demonstrate distinctive features of mineral components and microbial communities in the sediment layers separated by the barite crust. Within the mound, archaea accounted for 65% of the community. In contrast, the sediments above the barite boundary were overwhelmed by bacteria. The composition of microbial communities under the mound was similar to that in the sediments of the nearby Discovery Deep and marine cold seeps. This work reveals the zonation of microbial communities after the formation of the hydrothermal mound in the subsurface sediments of the rift basin.

  20. Zonation of Microbial Communities by a Hydrothermal Mound in the Atlantis II Deep (the Red Sea.

    Directory of Open Access Journals (Sweden)

    Yong Wang

    Full Text Available In deep-sea geothermal rift zones, the dispersal of hydrothermal fluids of moderately-high temperatures typically forms subseafloor mounds. Major mineral components of the crust covering the mound are barite and metal sulfides. As a result of the continental rifting along the Red Sea, metalliferous sediments accumulate on the seafloor of the Atlantis II Deep. In the present study, a barite crust was identified in a sediment core from the Atlantis II Deep, indicating the formation of a hydrothermal mound at the sampling site. Here, we examined how such a dense barite crust could affect the local environment and the distribution of microbial inhabitants. Our results demonstrate distinctive features of mineral components and microbial communities in the sediment layers separated by the barite crust. Within the mound, archaea accounted for 65% of the community. In contrast, the sediments above the barite boundary were overwhelmed by bacteria. The composition of microbial communities under the mound was similar to that in the sediments of the nearby Discovery Deep and marine cold seeps. This work reveals the zonation of microbial communities after the formation of the hydrothermal mound in the subsurface sediments of the rift basin.

  1. Deepwater Program: Lophelia II, continuing ecological research on deep-sea corals and deep-reef habitats in the Gulf of Mexico

    Science.gov (United States)

    Demopoulos, Amanda W.J.; Ross, Steve W.; Kellogg, Christina A.; Morrison, Cheryl L.; Nizinski, Martha S.; Prouty, Nancy G.; Bourque, Jill R.; Galkiewicz, Julie P.; Gray, Michael A.; Springmann, Marcus J.; Coykendall, D. Katharine; Miller, Andrew; Rhode, Mike; Quattrini, Andrea; Ames, Cheryl L.; Brooke, Sandra D.; McClain Counts, Jennifer; Roark, E. Brendan; Buster, Noreen A.; Phillips, Ryan M.; Frometa, Janessy

    2017-12-11

    The deep sea is a rich environment composed of diverse habitat types. While deep-sea coral habitats have been discovered within each ocean basin, knowledge about the ecology of these habitats and associated inhabitants continues to grow. This report presents information and results from the Lophelia II project that examined deep-sea coral habitats in the Gulf of Mexico. The Lophelia II project focused on Lophelia pertusa habitats along the continental slope, at depths ranging from 300 to 1,000 meters. The chapters are authored by several scientists from the U.S. Geological Survey, National Oceanic and Atmospheric Administration, University of North Carolina Wilmington, and Florida State University who examined the community ecology (from microbes to fishes), deep-sea coral age, growth, and reproduction, and population connectivity of deep-sea corals and inhabitants. Data from these studies are presented in the chapters and appendixes of the report as well as in journal publications. This study was conducted by the Ecosystems Mission Area of the U.S. Geological Survey to meet information needs identified by the Bureau of Ocean Energy Management.

  2. Draft Genome Sequence of Deep-Sea Alteromonas sp. Strain V450 Isolated from the Marine Sponge Leiodermatium sp.

    Science.gov (United States)

    Wang, Guojun; Barrett, Nolan H; McCarthy, Peter J

    2017-02-02

    The proteobacterium Alteromonas sp. strain V450 was isolated from the Atlantic deep-sea sponge Leiodermatium sp. Here, we report the draft genome sequence of this strain, with a genome size of approx. 4.39 Mb and a G+C content of 44.01%. The results will aid deep-sea microbial ecology, evolution, and sponge-microbe association studies. Copyright © 2017 Wang et al.

  3. Distinct Bacterial Microbiomes Associate with the Deep-Sea Coral Eguchipsammia fistula from the Red Sea and from Aquaria Settings

    KAUST Repository

    Röthig, Till

    2017-08-10

    Microbial communities associated with deep-sea corals are beginning to be studied in earnest and the contribution of the microbiome to host organismal function remains to be investigated. In this regard, the ability of the microbiome to adjust to prevailing environmental conditions might provide clues to its functional importance. In this study, we characterized bacterial community composition associated with the deep-sea coral Eguchipsammia fistula under natural (in situ) and aquaria (ex situ) settings using 16S rRNA gene amplicon sequencing. We compared freshly collected Red Sea coral specimens with those reared for >1 year at conditions that partially differed from the natural environment, in particular regarding increased oxygen and food availability under ex situ conditions. We found substantial differences between the microbiomes associated with corals under both environmental settings. The core microbiome comprised only six bacterial taxa consistently present in all corals, whereas the majority of bacteria were exclusively associated either with freshly collected corals or corals under long-term reared aquaria settings. Putative functional profiling of microbial communities showed that corals in their natural habitat were enriched for processes indicative of a carbon- and nitrogen-limited environment, which might be reflective of differences in diet under in situ and ex situ conditions. The ability of E. fistula to harbor distinct microbiomes under different environmental settings might contribute to the flexibility and phenotypic plasticity of this cosmopolitan coral. Future efforts should further assess the role of these different bacteria in holobiont function, in particular since E. fistula is naturally present in markedly different environments.

  4. Distinct Bacterial Microbiomes Associate with the Deep-Sea Coral Eguchipsammia fistula from the Red Sea and from Aquaria Settings

    KAUST Repository

    Rö thig, Till; Roik, Anna Krystyna; Yum, Lauren; Voolstra, Christian R.

    2017-01-01

    Microbial communities associated with deep-sea corals are beginning to be studied in earnest and the contribution of the microbiome to host organismal function remains to be investigated. In this regard, the ability of the microbiome to adjust to prevailing environmental conditions might provide clues to its functional importance. In this study, we characterized bacterial community composition associated with the deep-sea coral Eguchipsammia fistula under natural (in situ) and aquaria (ex situ) settings using 16S rRNA gene amplicon sequencing. We compared freshly collected Red Sea coral specimens with those reared for >1 year at conditions that partially differed from the natural environment, in particular regarding increased oxygen and food availability under ex situ conditions. We found substantial differences between the microbiomes associated with corals under both environmental settings. The core microbiome comprised only six bacterial taxa consistently present in all corals, whereas the majority of bacteria were exclusively associated either with freshly collected corals or corals under long-term reared aquaria settings. Putative functional profiling of microbial communities showed that corals in their natural habitat were enriched for processes indicative of a carbon- and nitrogen-limited environment, which might be reflective of differences in diet under in situ and ex situ conditions. The ability of E. fistula to harbor distinct microbiomes under different environmental settings might contribute to the flexibility and phenotypic plasticity of this cosmopolitan coral. Future efforts should further assess the role of these different bacteria in holobiont function, in particular since E. fistula is naturally present in markedly different environments.

  5. The Effects of Temperature and Hydrostatic Pressure on Metal Toxicity: Insights into Toxicity in the Deep Sea.

    Science.gov (United States)

    Brown, Alastair; Thatje, Sven; Hauton, Chris

    2017-09-05

    Mineral prospecting in the deep sea is increasing, promoting concern regarding potential ecotoxicological impacts on deep-sea fauna. Technological difficulties in assessing toxicity in deep-sea species has promoted interest in developing shallow-water ecotoxicological proxy species. However, it is unclear how the low temperature and high hydrostatic pressure prevalent in the deep sea affect toxicity, and whether adaptation to deep-sea environmental conditions moderates any effects of these factors. To address these uncertainties we assessed the effects of temperature and hydrostatic pressure on lethal and sublethal (respiration rate, antioxidant enzyme activity) toxicity in acute (96 h) copper and cadmium exposures, using the shallow-water ecophysiological model organism Palaemon varians. Low temperature reduced toxicity in both metals, but reduced cadmium toxicity significantly more. In contrast, elevated hydrostatic pressure increased copper toxicity, but did not affect cadmium toxicity. The synergistic interaction between copper and cadmium was not affected by low temperature, but high hydrostatic pressure significantly enhanced the synergism. Differential environmental effects on toxicity suggest different mechanisms of action for copper and cadmium, and highlight that mechanistic understanding of toxicity is fundamental to predicting environmental effects on toxicity. Although results infer that sensitivity to toxicants differs across biogeographic ranges, shallow-water species may be suitable ecotoxicological proxies for deep-sea species, dependent on adaptation to habitats with similar environmental variability.

  6. Magnesian calcite and the problem of the origin of carbonates in the deep-sea Old Black Sea sediments

    Energy Technology Data Exchange (ETDEWEB)

    Georgiev, V M

    1988-04-01

    The Old Black Sea (Lower-Middle Holocene) deep-sea sediments in the Black Sea basin contain carbonate laminae with a fixed position in the section - in the base of the typical sapropelic muds. The areal distribution of these laminae covers the whole continental slope and rise. They are usually lacking in the sediments of the abyssal plain. XRD, SEM and EDS studies show that the laminae comprise mainly authigenic carbonates - aragonite and magnesian calcite. Aragonite occurs as elongated rice-shaped monocrystals or as diverse aggregates of elongated crystal platelets. The magnesian calcite (6-14 mol % MgCO/sub 3/) forms aggregates of isometric grains with submicritic dimensions between the aragonite grains or individual laminae consisting of idiomorphic rhombohedral and/or skeleton crystals. Low-magnesian calcite is also found sometimes. Usually it is related to Holocene coccoliths without traces of recrystallization. The laminae do not show traces of lithification. A hemogenic-synsedimentary genesis of the carbonate laminae is suggested; their mineral composition witnesses marine chemical composition of the initial solutions with a high Mg/Ca ratio.

  7. Shelf-to-basin iron shuttling enhances vivianite formation in deep Baltic Sea sediments

    Science.gov (United States)

    Reed, Daniel C.; Gustafsson, Bo G.; Slomp, Caroline P.

    2016-01-01

    Coastal hypoxia is a growing and persistent problem largely attributable to enhanced terrestrial nutrient (i.e., nitrogen and phosphorus) loading. Recent studies suggest phosphorus removal through burial of iron (II) phosphates, putatively vivianite, plays an important role in nutrient cycling in the Baltic Sea - the world's largest anthropogenic dead zone - yet the dynamics of iron (II) phosphate formation are poorly constrained. To address this, a reactive-transport model was used to reconstruct the diagenetic and depositional history of sediments in the Fårö basin, a deep anoxic and sulphidic region of the Baltic Sea where iron (II) phosphates have been observed. Simulations demonstrate that transport of iron from shelf sediments to deep basins enhances vivianite formation while sulphide concentrations are low, but that pyrite forms preferentially over vivianite when sulphate reduction intensifies due to elevated organic loading. Episodic reoxygenation events, associated with major inflows of oxic waters, encourage the retention of iron oxyhydroxides and iron-bound phosphorus in sediments, increasing vivianite precipitation as a result. Results suggest that artificial reoxygenation of the Baltic Sea bottom waters could sequester up to 3% of the annual external phosphorus loads as iron (II) phosphates, but this is negligible when compared to potential internal phosphorus loads due to dissolution of iron oxyhydroxides when low oxygen conditions prevail. Thus, enhancing vivianite formation through artificial reoxygenation of deep waters is not a viable engineering solution to eutrophication in the Baltic Sea. Finally, simulations suggest that regions with limited sulphate reduction and hypoxic intervals, such as eutrophic estuaries, could act as important phosphorus sinks by sequestering vivianite. This could potentially alleviate eutrophication in shelf and slope environments.

  8. Simulated interannual variability of the Greenland Sea deep water formation and its connection to surface forcing

    Science.gov (United States)

    Haekkinen, Sirpa

    1995-01-01

    A fully prognostic Arctic ice-ocean model is used to study the interannual variability of deepwater formation in the Greenland Sea Gyre based on the simulations for the Arctic ice-ocean system for the period 1955 and 1960 - 1985. The model uses monthly climatology for thermodynamic forcing components (such as air temperature and cloudiness), together with constant annual net precipitation and river runoff. The daily wind forcing is derived from analyzed sea level air pressures from the National Center for Atmospheric Research (NCAR). In summary, the model shows that the occurence of deep convection in the Greenland Sea Gyre is controlled by the extensive Fram Strait ice export and/or local wind conditions in the Greenland Sea. In the latter case the weakening of the local wind curl allows the Polar Front to move eastward. The movement of the Polar Front causes adverse ice conditions, often together with much larger than normal ice export from the Arctic, such as in 1968, which can block convection in the gyre. The density difference between upper and lower layers is investigated as an indication of water mass formation through convection, occurring as strong diffusion in the model. The model-simulated density difference between the average top 100 m and deep levels reveals that the period 1960 - 1985 had only a few distinct years with weak stratification, and, especially, the model predicts no deep convection since the nid-1970s. The common factor for the years of the weakest decrease of the model-predicted heat content of the upper 2000 m which can, to a high degree, be explained by local heat loss.

  9. Exploring Archaeal Communities And Genomes Across Five Deep-Sea Brine Lakes Of The Red Sea With A Focus On Methanogens

    KAUST Repository

    Guan, Yue

    2015-12-15

    The deep-sea hypersaline lakes in the Red Sea are among the most challenging, extreme, and unusual environments on the planet Earth. Despite their harshness to life, they are inhabited by diverse and novel members of prokaryotes. Methanogenesis was proposed as one of the main metabolic pathways that drive microbial colonization in similar habitats. However, not much is known about the identities of the methane-producing microbes in the Red Sea, let alone the way in which they could adapt to such poly extreme environments. Combining a range of microbial community assessment, cultivation and omics (genomics, transcriptomics, and single amplified genomics) approaches, this dissertation seeks to fill these gaps in our knowledge by studying archaeal composition, particularly methanogens, their genomic capacities and transcriptomic characteristics in order to elucidate their diversity, function, and adaptation to the deep-sea brines of the Red Sea. Although typical methanogens are not abundant in the samples collected from brine pool habitats of the Red Sea, the pilot cultivation experiment has revealed novel halophilic methanogenic species of the domain Archaea. Their physiological traits as well as their genomic and transcriptomic features unveil an interesting genetic and functional adaptive capacity that allows them to thrive in the unique deep-sea hypersaline environments in the Red Sea.

  10. Hydrothermally generated aromatic compounds are consumed by bacteria colonizing in Atlantis II Deep of the Red Sea

    KAUST Repository

    Wang, Yong; Yang, Jiangke; Lee, Onon; Dash, Swagatika; Lau, Chunkwan; Al-Suwailem, Abdulaziz M.; Wong, Tim; Danchin, Antoine; Qian, Peiyuan

    2011-01-01

    , the temperature of the Atlantis II Deep brine pool in the Red Sea has increased from 56 to 68 °C, whereas the temperature at the nearby Discovery Deep brine pool has remained relatively stable at about 44 °C. In this report, we confirmed the presence of aromatic

  11. Sperm whale long-range echolocation sounds revealed by ANTARES, a deep-sea neutrino telescope

    Science.gov (United States)

    André, M.; Caballé, A.; van der Schaar, M.; Solsona, A.; Houégnigan, L.; Zaugg, S.; Sánchez, A. M.; Castell, J. V.; Solé, M.; Vila, F.; Djokic, D.; Adrián-Martínez, S.; Albert, A.; Anghinolfi, M.; Anton, G.; Ardid, M.; Aubert, J.-J.; Avgitas, T.; Baret, B.; Barrios-Martí, J.; Basa, S.; Bertin, V.; Biagi, S.; Bormuth, R.; Bouwhuis, M. C.; Bruijn, R.; Brunner, J.; Busto, J.; Capone, A.; Caramete, L.; Carr, J.; Celli, S.; Chiarusi, T.; Circella, M.; Coleiro, A.; Coniglione, R.; Costantini, H.; Coyle, P.; Creusot, A.; Deschamps, A.; De Bonis, G.; Distefano, C.; Di Palma, I.; Donzaud, C.; Dornic, D.; Drouhin, D.; Eberl, T.; El Bojaddaini, I.; Elsässer, D.; Enzenhöfer, A.; Fehn, K.; Felis, I.; Fusco, L. A.; Galatà, S.; Gay, P.; Geißelsöder, S.; Geyer, K.; Giordano, V.; Gleixner, A.; Glotin, H.; Gracia-Ruiz, R.; Graf, K.; Hallmann, S.; van Haren, H.; Heijboer, A. J.; Hello, Y.; Hernandez-Rey, J. J.; Hößl, J.; Hofestädt, J.; Hugon, C.; Illuminati, G.; James, C. W.; de Jong, M.; Jongen, M.; Kadler, M.; Kalekin, O.; Katz, U.; Kießling, D.; Kouchner, A.; Kreter, M.; Kreykenbohm, I.; Kulikovskiy, V.; Lachaud, C.; Lahmann, R.; Lefèvre, D.; Leonora, E.; Loucatos, S.; Marcelin, M.; Margiotta, A.; Marinelli, A.; Martínez-Mora, J. A.; Mathieu, A.; Melis, K.; Michael, T.; Migliozzi, P.; Moussa, A.; Mueller, C.; Nezri, E.; Păvălaş, G. E.; Pellegrino, C.; Perrina, C.; Piattelli, P.; Popa, V.; Pradier, T.; Racca, C.; Riccobene, G.; Roensch, K.; Saldaña, M.; Samtleben, D. F. E.; Sanguineti, M.; Sapienza, P.; Schnabel, J.; Schüssler, F.; Seitz, T.; Sieger, C.; Spurio, M.; Stolarczyk, Th.; Sánchez-Losa, A.; Taiuti, M.; Trovato, A.; Tselengidou, M.; Turpin, D.; Tönnis, C.; Vallage, B.; Vallée, C.; Van Elewyck, V.; Vivolo, D.; Wagner, S.; Wilms, J.; Zornoza, J. D.; Zuñiga, J.

    2017-01-01

    Despite dedicated research has been carried out to adequately map the distribution of the sperm whale in the Mediterranean Sea, unlike other regions of the world, the species population status is still presently uncertain. The analysis of two years of continuous acoustic data provided by the ANTARES neutrino telescope revealed the year-round presence of sperm whales in the Ligurian Sea, probably associated with the availability of cephalopods in the region. The presence of the Ligurian Sea sperm whales was demonstrated through the real-time analysis of audio data streamed from a cabled-to-shore deep-sea observatory that allowed the hourly tracking of their long-range echolocation behaviour on the Internet. Interestingly, the same acoustic analysis indicated that the occurrence of surface shipping noise would apparently not condition the foraging behaviour of the sperm whale in the area, since shipping noise was almost always present when sperm whales were acoustically detected. The continuous presence of the sperm whale in the region confirms the ecological value of the Ligurian sea and the importance of ANTARES to help monitoring its ecosystems. PMID:28401960

  12. Sperm whale long-range echolocation sounds revealed by ANTARES, a deep-sea neutrino telescope

    Science.gov (United States)

    André, M.; Caballé, A.; van der Schaar, M.; Solsona, A.; Houégnigan, L.; Zaugg, S.; Sánchez, A. M.; Castell, J. V.; Solé, M.; Vila, F.; Djokic, D.; Adrián-Martínez, S.; Albert, A.; Anghinolfi, M.; Anton, G.; Ardid, M.; Aubert, J.-J.; Avgitas, T.; Baret, B.; Barrios-Martí, J.; Basa, S.; Bertin, V.; Biagi, S.; Bormuth, R.; Bouwhuis, M. C.; Bruijn, R.; Brunner, J.; Busto, J.; Capone, A.; Caramete, L.; Carr, J.; Celli, S.; Chiarusi, T.; Circella, M.; Coleiro, A.; Coniglione, R.; Costantini, H.; Coyle, P.; Creusot, A.; Deschamps, A.; de Bonis, G.; Distefano, C.; di Palma, I.; Donzaud, C.; Dornic, D.; Drouhin, D.; Eberl, T.; El Bojaddaini, I.; Elsässer, D.; Enzenhöfer, A.; Fehn, K.; Felis, I.; Fusco, L. A.; Galatà, S.; Gay, P.; Geißelsöder, S.; Geyer, K.; Giordano, V.; Gleixner, A.; Glotin, H.; Gracia-Ruiz, R.; Graf, K.; Hallmann, S.; van Haren, H.; Heijboer, A. J.; Hello, Y.; Hernandez-Rey, J. J.; Hößl, J.; Hofestädt, J.; Hugon, C.; Illuminati, G.; James, C. W.; de Jong, M.; Jongen, M.; Kadler, M.; Kalekin, O.; Katz, U.; Kießling, D.; Kouchner, A.; Kreter, M.; Kreykenbohm, I.; Kulikovskiy, V.; Lachaud, C.; Lahmann, R.; Lefèvre, D.; Leonora, E.; Loucatos, S.; Marcelin, M.; Margiotta, A.; Marinelli, A.; Martínez-Mora, J. A.; Mathieu, A.; Melis, K.; Michael, T.; Migliozzi, P.; Moussa, A.; Mueller, C.; Nezri, E.; Păvălaş, G. E.; Pellegrino, C.; Perrina, C.; Piattelli, P.; Popa, V.; Pradier, T.; Racca, C.; Riccobene, G.; Roensch, K.; Saldaña, M.; Samtleben, D. F. E.; Sanguineti, M.; Sapienza, P.; Schnabel, J.; Schüssler, F.; Seitz, T.; Sieger, C.; Spurio, M.; Stolarczyk, Th.; Sánchez-Losa, A.; Taiuti, M.; Trovato, A.; Tselengidou, M.; Turpin, D.; Tönnis, C.; Vallage, B.; Vallée, C.; van Elewyck, V.; Vivolo, D.; Wagner, S.; Wilms, J.; Zornoza, J. D.; Zuñiga, J.

    2017-04-01

    Despite dedicated research has been carried out to adequately map the distribution of the sperm whale in the Mediterranean Sea, unlike other regions of the world, the species population status is still presently uncertain. The analysis of two years of continuous acoustic data provided by the ANTARES neutrino telescope revealed the year-round presence of sperm whales in the Ligurian Sea, probably associated with the availability of cephalopods in the region. The presence of the Ligurian Sea sperm whales was demonstrated through the real-time analysis of audio data streamed from a cabled-to-shore deep-sea observatory that allowed the hourly tracking of their long-range echolocation behaviour on the Internet. Interestingly, the same acoustic analysis indicated that the occurrence of surface shipping noise would apparently not condition the foraging behaviour of the sperm whale in the area, since shipping noise was almost always present when sperm whales were acoustically detected. The continuous presence of the sperm whale in the region confirms the ecological value of the Ligurian sea and the importance of ANTARES to help monitoring its ecosystems.

  13. Borders of life: lessons from Microbiology of deep-sea hydrothermal vents

    Science.gov (United States)

    Prieur, D.

    Thirty years ago, the deep-sea was known as a low density biotope due to coldness, darkness and famine-like conditions. The discovery of deep-sea hydrothermal vents in the Eastern Pacific in 1977 and the associated black smokers in 1979 considerably changed our views about life on Earth. For the first time, an ecosystem almost independent (at least for tens of years) of solar nergy was discovered. Besides the spectacular and unexpected communities of invertebrates based on symbiotic associations with chemo-litho-autotrophic bacteria, prokaryotic communities associated with high temperature black smokers fascinated microbiologists of extreme environments. Within mineral structures where temperature gradients may fluctuate from ambient seawater temperatures (2°C) up to 350°C, thermophilic (optimal growth above 60°C) and hyperthermophilic (optimal growth above 80°C) microorganisms thrived under very severe conditions due to elevated hydrostatic pressure, toxic compounds or strong ionizing radiations. These organisms belong to both domains of Bacteria and Archaea and live aerobically but mostly anaerobically, using a variety of inorganic and organic carbon sources, and a variety of electron donnors and acceptors as well. The most thermophilic organism known on Earth was isolated from a mid-Atlantic-Ridge hydrotermal vent: Pyrolobus fumarii grows optimally at 110°c and its upper temperature limit for life is 113°C. Such an organism survived to autoclaving conditions currently used for sterilization procedures. Many other hyperthermophilic organisms were isolated and described, including fermenters, sulphate and sulphur reducers, hydrogen oxidizers, nitrate reducers, methanogens, etc. Although most of anaerobes are killed when exposed to oxygen, several deep-sea hyperthermophiles appeared to survive to both oxygen and starvation exposures, indicating that they probably can colonize rather distant environments Because of elevated hydrostatic pressure that exists at

  14. Precise Th/U-dating of small and heavily coated samples of deep sea corals

    Science.gov (United States)

    Lomitschka, Michael; Mangini, Augusto

    1999-07-01

    Marine carbonate skeletons like deep-sea corals are frequently coated with iron and manganese oxides/hydroxides which adsorb additional thorium and uranium out of the sea water. A new cleaning procedure has been developed to reduce this contamination. In this further cleaning step a solution of Na 2EDTA (Na 2H 2T B) and ascorbic acid is used which composition is optimised especially for samples of 20 mg of weight. It was first tested on aliquots of a reef-building coral which had been artificially contaminated with powdered ferromanganese nodule. Applied on heavily contaminated deep-sea corals (scleractinia), it reduced excess 230Th by another order of magnitude in addition to usual cleaning procedures. The measurement of at least three fractions of different contamination, together with an additional standard correction for contaminated carbonates results in Th/U-ages corrected for the authigenic component. A good agreement between Th/U- and 14C-ages can be achieved even for extremely coated corals.

  15. Biomagnification of persistent organic pollutants in a deep-sea, temperate food web.

    Science.gov (United States)

    Romero-Romero, Sonia; Herrero, Laura; Fernández, Mario; Gómara, Belén; Acuña, José Luis

    2017-12-15

    Polychlorinated biphenyls (PCBs), polybrominated diphenyl ethers (PBDEs) and polychlorinated dibenzo-p-dioxins and -furans (PCDD/Fs) were measured in a temperate, deep-sea ecosystem, the Avilés submarine Canyon (AC; Cantabrian Sea, Southern Bay of Biscay). There was an increase of contaminant concentration with the trophic level of the organisms, as calculated from stable nitrogen isotope data (δ 15 N). Such biomagnification was only significant for the pelagic food web and its magnitude was highly dependent on the type of top predators included in the analysis. The trophic magnification factor (TMF) for PCB-153 in the pelagic food web (spanning four trophic levels) was 6.2 or 2.2, depending on whether homeotherm top predators (cetaceans and seabirds) were included or not in the analysis, respectively. Since body size is significantly correlated with δ 15 N, it can be used as a proxy to estimate trophic magnification, what can potentially lead to a simple and convenient method to calculate the TMF. In spite of their lower biomagnification, deep-sea fishes showed higher concentrations than their shallower counterparts, although those differences were not significant. In summary, the AC fauna exhibits contaminant levels comparable or lower than those reported in other systems. Copyright © 2017 Elsevier B.V. All rights reserved.

  16. Accelerated degradation of polyetheretherketone and its composites in the deep sea.

    Science.gov (United States)

    Liu, Hao; Wang, Jianzhang; Jiang, Pengfei; Yan, Fengyuan

    2018-04-01

    The performance of polymer composites in seawater, under high hydrostatic pressure (typically few tens of MPa), for simulating exposures at great depths in seas and oceans, has been little studied. In this paper, polyetheretherketone (PEEK) and its composites reinforced by carbon fibres and glass fibres were prepared. The seawater environment with different seawater hydrostatic pressure ranging from normal pressure to 40 MPa was simulated with special equipment, in which the seawater absorption and wear behaviour of PEEK and PEEK-based composites were examined in situ . The effects of seawater hydrostatic pressure on the mechanical properties, wear resistance and microstructure of PEEK and its composites were focused on. The results showed that seawater absorption of PEEK and its composites were greatly accelerated by increased hydrostatic pressure in the deep sea. Affected by seawater absorption, both for neat PEEK and composites, the degradation on mechanical properties, wear resistance and crystallinity were induced, the degree of which was increasingly serious with the increase of hydrostatic pressure of seawater environment. There existed a good correlation in an identical form of exponential function between the wear rate and the seawater hydrostatic pressure. Moreover, the corresponding mechanisms of the effects of deep-sea hydrostatic pressure were also discussed.

  17. Experimental studies on the geochemical behaviour of 54-Mn considering coastal and deep sea sediments

    International Nuclear Information System (INIS)

    Guegueniat, P.; Boust, D.; Dupont, J.P.; Aprosi, G.

    1985-01-01

    In order to study the geochemical behaviour of 54-Mn in the marine environment (Mn/sup 2+/) 200 sediments gathered in deep sea and in coastal waters were contaminated experimentally. To correlate the various results, the oxidation processes occurring with or without sediments should be specified. During this experimental work, the geochemical behaviour of manganese is dealt with using a radioactive tracer (54-Mn) in the divalent state and sediments collected on french littoral (160) in deep sea (30). The latest data published offer an excellent assessment of research findings on manganese in marine and estuary environments and testify to the interest constantly generated by this subject. It is difficult to establish a priori any predictions on the behaviour of manganese based on the properties of a given environment, notably as concerns redox conditions. The oxidation of manganese was found to be governed by a very slow autocatalysis mechanism capable of being concealed by surface catalyses on mineral phases in suspension or oxidation due to bacteria. The residence time in sea water vary considerably depending on the case from a few days to some tens of years

  18. Accelerated degradation of polyetheretherketone and its composites in the deep sea

    Science.gov (United States)

    Liu, Hao; Wang, Jianzhang; Jiang, Pengfei; Yan, Fengyuan

    2018-04-01

    The performance of polymer composites in seawater, under high hydrostatic pressure (typically few tens of MPa), for simulating exposures at great depths in seas and oceans, has been little studied. In this paper, polyetheretherketone (PEEK) and its composites reinforced by carbon fibres and glass fibres were prepared. The seawater environment with different seawater hydrostatic pressure ranging from normal pressure to 40 MPa was simulated with special equipment, in which the seawater absorption and wear behaviour of PEEK and PEEK-based composites were examined in situ. The effects of seawater hydrostatic pressure on the mechanical properties, wear resistance and microstructure of PEEK and its composites were focused on. The results showed that seawater absorption of PEEK and its composites were greatly accelerated by increased hydrostatic pressure in the deep sea. Affected by seawater absorption, both for neat PEEK and composites, the degradation on mechanical properties, wear resistance and crystallinity were induced, the degree of which was increasingly serious with the increase of hydrostatic pressure of seawater environment. There existed a good correlation in an identical form of exponential function between the wear rate and the seawater hydrostatic pressure. Moreover, the corresponding mechanisms of the effects of deep-sea hydrostatic pressure were also discussed.

  19. Volcanism and Tectonics of the Central Deep Basin, Sea of Japan

    Science.gov (United States)

    Lelikov, E. P.; Emelyanova, T. A.; Pugachev, A. A.

    2018-01-01

    The paper presents the results of a study on the geomorphic structure, tectonic setting, and volcanism of the volcanoes and volcanic ridges in the deep Central Basin of the Sea of Japan. The ridges rise 500-600 m above the acoustic basement of the basin. These ridges were formed on fragments of thinned continental crust along deep faults submeridionally crossing the Central Basin and the adjacent continental part of the Primorye. The morphostructures of the basin began to submerge below sea level in the Middle Miocene and reached their contemporary positions in the Pliocene. Volcanism in the Central Basin occurred mostly in the Middle Miocene-Pliocene and formed marginal-sea basaltoids with OIB (ocean island basalt) geochemical signatures indicating the lower-mantle plume origin of these rocks. The OIB signatures of basaltoids tend to be expressed better in the eastern part of the Central Basin, where juvenile oceanic crust has developed. The genesis of this crust is probably related to rising and melting of the Pacific superplume apophyse.

  20. Ceramic Spheres—A Novel Solution to Deep Sea Buoyancy Modules

    Science.gov (United States)

    Jiang, Bo; Blugan, Gurdial; Sturzenegger, Philip N.; Gonzenbach, Urs T.; Misson, Michael; Thornberry, John; Stenerud, Runar; Cartlidge, David; Kuebler, Jakob

    2016-01-01

    Ceramic-based hollow spheres are considered a great driving force for many applications such as offshore buoyancy modules due to their large diameter to wall thickness ratio and uniform wall thickness geometric features. We have developed such thin-walled hollow spheres made of alumina using slip casting and sintering processes. A diameter as large as 50 mm with a wall thickness of 0.5–1.0 mm has been successfully achieved in these spheres. Their material and structural properties were examined by a series of characterization tools. Particularly, the feasibility of these spheres was investigated with respect to its application for deep sea (>3000 m) buoyancy modules. These spheres, sintered at 1600 °C and with 1.0 mm of wall thickness, have achieved buoyancy of more than 54%. As the sphere’s wall thickness was reduced (e.g., 0.5 mm), their buoyancy reached 72%. The mechanical performance of such spheres has shown a hydrostatic failure pressure above 150 MPa, corresponding to a rating depth below sea level of 5000 m considering a safety factor of 3. The developed alumina-based ceramic spheres are feasible for low cost and scaled-up production and show great potential at depths greater than those achievable by the current deep-sea buoyancy module technologies. PMID:28773651

  1. Trace elements and stable isotope ratios (δ13C and δ15N) in fish from deep-waters of the Sulu Sea and the Celebes Sea

    International Nuclear Information System (INIS)

    Asante, Kwadwo Ansong; Agusa, Tetsuro; Kubota, Reiji; Mochizuki, Hiroko; Ramu, Karri; Nishida, Shuhei; Ohta, Suguru; Yeh, Hsin-ming; Subramanian, Annamalai; Tanabe, Shinsuke

    2010-01-01

    Trace elements (TEs) and stable isotope ratios (δ 15 N and δ 13 C) were analyzed in fish from deep-water of the Sulu Sea, the Celebes Sea and the Philippine Sea. Concentrations of V and Pb in pelagic fish from the Sulu Sea were higher than those from the Celebes Sea, whereas the opposite trend was observed for δ 13 C. High concentrations of Zn, Cu and Ag were found in non-migrant fish in deep-water, while Rb level was high in fish which migrate up to the epipelagic zone, probably resulting from differences in background levels of these TEs in each water environment or function of adaptation to deep-water by migrant and non-migrant species. Arsenic level in the Sulu Sea fish was positively correlated with δ 15 N, indicating biomagnification of arsenic. To our knowledge, this is the first study on relationship between diel vertical migration and TE accumulation in deep-water fish.

  2. Long-Term Monitoring of Dolphin Biosonar Activity in Deep Pelagic Waters of the Mediterranean Sea.

    Science.gov (United States)

    Caruso, Francesco; Alonge, Giuseppe; Bellia, Giorgio; De Domenico, Emilio; Grammauta, Rosario; Larosa, Giuseppina; Mazzola, Salvatore; Riccobene, Giorgio; Pavan, Gianni; Papale, Elena; Pellegrino, Carmelo; Pulvirenti, Sara; Sciacca, Virginia; Simeone, Francesco; Speziale, Fabrizio; Viola, Salvatore; Buscaino, Giuseppa

    2017-06-28

    Dolphins emit short ultrasonic pulses (clicks) to acquire information about the surrounding environment, prey and habitat features. We investigated Delphinidae activity over multiple temporal scales through the detection of their echolocation clicks, using long-term Passive Acoustic Monitoring (PAM). The Istituto Nazionale di Fisica Nucleare operates multidisciplinary seafloor observatories in a deep area of the Central Mediterranean Sea. The Ocean noise Detection Experiment collected data offshore the Gulf of Catania from January 2005 to November 2006, allowing the study of temporal patterns of dolphin activity in this deep pelagic zone for the first time. Nearly 5,500 five-minute recordings acquired over two years were examined using spectrogram analysis and through development and testing of an automatic detection algorithm. Echolocation activity of dolphins was mostly confined to nighttime and crepuscular hours, in contrast with communicative signals (whistles). Seasonal variation, with a peak number of clicks in August, was also evident, but no effect of lunar cycle was observed. Temporal trends in echolocation corresponded to environmental and trophic variability known in the deep pelagic waters of the Ionian Sea. Long-term PAM and the continued development of automatic analysis techniques are essential to advancing the study of pelagic marine mammal distribution and behaviour patterns.

  3. Isotope analysis of water trapped in fluid inclusions in deep sea corals

    Science.gov (United States)

    Vonhof, Hubert; Reijmer, John; Feenstra, Eline; Mienis, Furu

    2015-04-01

    Extant Lophelia pertusa deep sea coral specimens from the Loachev mound region in the North Atlantic Ocean contain water filled fluid inclusions in their skeleton. This fluid inclusion water was extracted with a crushing device, and its hydrogen and oxygen isotope ratios analysed. The resulting data span a wide range of isotope values which are remarkably different from the seawater isotope composition of the sites studied. Comparison with food source isotope signatures suggests that coral inclusion water contains a high, but variable proportion of metabolic water. The isotope composition of the inclusion water appears to vary with the position on the deep see coral reef, and shows a correlation with the stable isotope composition of the coral aragonite. This correlation seems to suggest that growth rate and other ecological factors play an important role in determining the isotope composition of fluids trapped in the coral skeleton, which can potentially be developed as a proxy for non-equilibrium isotope fractionation observed in the aragonite skeleton of many of the common deep sea coral species.

  4. Vertical migrations of a deep-sea fish and its prey.

    Directory of Open Access Journals (Sweden)

    Pedro Afonso

    Full Text Available It has been speculated that some deep-sea fishes can display large vertical migrations and likely doing so to explore the full suite of benthopelagic food resources, especially the pelagic organisms of the deep scattering layer (DSL. This would help explain the success of fishes residing at seamounts and the increased biodiversity found in these features of the open ocean. We combined active plus passive acoustic telemetry of blackspot seabream with in situ environmental and biological (backscattering data collection at a seamount to verify if its behaviour is dominated by vertical movements as a response to temporal changes in environmental conditions and pelagic prey availability. We found that seabream extensively migrate up and down the water column, that these patterns are cyclic both in short-term (tidal, diel as well as long-term (seasonal scales, and that they partially match the availability of potential DSL prey components. Furthermore, the emerging pattern points to a more complex spatial behaviour than previously anticipated, suggesting a seasonal switch in the diel behaviour mode (benthic vs. pelagic of seabream, which may reflect an adaptation to differences in prey availability. This study is the first to document the fine scale three-dimensional behaviour of a deep-sea fish residing at seamounts.

  5. Rapid Response of Eastern Mediterranean Deep Sea Microbial Communities to Oil

    Energy Technology Data Exchange (ETDEWEB)

    Liu, Jiang; Techtmann, Stephen M.; Woo, Hannah L.; Ning, Daliang; Fortney, Julian L.; Hazen, Terry C.

    2017-07-18

    Deep marine oil spills like the Deepwater Horizon (DWH) in the Gulf of Mexico have the potential to drastically impact marine systems. Crude oil contamination in marine systems remains a concern, especially for countries around the Mediterranean Sea with off shore oil production. The goal of this study was to investigate the response of indigenous microbial communities to crude oil in the deep Eastern Mediterranean Sea (E. Med.) water column and to minimize potential bias associated with storage and shifts in microbial community structure from sample storage. 16S rRNA amplicon sequencing was combined with GeoChip metagenomic analysis to monitor the microbial community changes to the crude oil and dispersant in on-ship microcosms set up immediately after water collection. After 3 days of incubation at 14 °C, the microbial communities from two different water depths: 824 m and 1210 m became dominated by well-known oil degrading bacteria. The archaeal population and the overall microbial community diversity drastically decreased. Similarly, GeoChip metagenomic analysis revealed a tremendous enrichment of genes related to oil biodegradation, which was consistent with the results from the DWH oil spill. These results highlight a rapid microbial adaption to oil contamination in the deep E. Med., and indicate strong oil biodegradation potentia

  6. Functional, size and taxonomic diversity of fish along a depth gradient in the deep sea.

    Science.gov (United States)

    Mindel, Beth L; Neat, Francis C; Trueman, Clive N; Webb, Thomas J; Blanchard, Julia L

    2016-01-01

    Biodiversity is well studied in ecology and the concept has been developed to include traits of species, rather than solely taxonomy, to better reflect the functional diversity of a system. The deep sea provides a natural environmental gradient within which to study changes in different diversity metrics, but traits of deep-sea fish are not widely known, hampering the application of functional diversity to this globally important system. We used morphological traits to determine the functional richness and functional divergence of demersal fish assemblages along the continental slope in the Northeast Atlantic, at depths of 300-2,000 m. We compared these metrics to size diversity based on individual body size and species richness. Functional richness and size diversity showed similar patterns, with the highest diversity at intermediate depths; functional divergence showed the opposite pattern, with the highest values at the shallowest and deepest parts of the study site. Species richness increased with depth. The functional implications of these patterns were deduced by examining depth-related changes in morphological traits and the dominance of feeding guilds as illustrated by stable isotope analyses. The patterns in diversity and the variation in certain morphological traits can potentially be explained by changes in the relative dominance of pelagic and benthic feeding guilds. All measures of diversity examined here suggest that the deep areas of the continental slope may be equally or more diverse than assemblages just beyond the continental shelf.

  7. Functional, size and taxonomic diversity of fish along a depth gradient in the deep sea

    Directory of Open Access Journals (Sweden)

    Beth L. Mindel

    2016-09-01

    Full Text Available Biodiversity is well studied in ecology and the concept has been developed to include traits of species, rather than solely taxonomy, to better reflect the functional diversity of a system. The deep sea provides a natural environmental gradient within which to study changes in different diversity metrics, but traits of deep-sea fish are not widely known, hampering the application of functional diversity to this globally important system. We used morphological traits to determine the functional richness and functional divergence of demersal fish assemblages along the continental slope in the Northeast Atlantic, at depths of 300–2,000 m. We compared these metrics to size diversity based on individual body size and species richness. Functional richness and size diversity showed similar patterns, with the highest diversity at intermediate depths; functional divergence showed the opposite pattern, with the highest values at the shallowest and deepest parts of the study site. Species richness increased with depth. The functional implications of these patterns were deduced by examining depth-related changes in morphological traits and the dominance of feeding guilds as illustrated by stable isotope analyses. The patterns in diversity and the variation in certain morphological traits can potentially be explained by changes in the relative dominance of pelagic and benthic feeding guilds. All measures of diversity examined here suggest that the deep areas of the continental slope may be equally or more diverse than assemblages just beyond the continental shelf.

  8. Diversity, abundance and distribution of amoA-encoding archaea in deep-sea methane seep sediments of the Okhotsk Sea.

    Science.gov (United States)

    Dang, Hongyue; Luan, Xi-Wu; Chen, Ruipeng; Zhang, Xiaoxia; Guo, Lizhong; Klotz, Martin G

    2010-06-01

    The ecological characteristics of amoA-encoding archaea (AEA) in deep-sea sediments are largely unsolved. This paper aimed to study the diversity, structure, distribution and abundance of the archaeal community and especially its AEA components in the cold seep surface sediments of the Okhotsk Sea, a marginal sea harboring one of the largest methane hydrate reservoirs in the world. Diverse archaeal 16S rRNA gene sequences were identified, with the majority being related to sequences from other cold seep and methane-rich sediment environments. However, the AEA diversity and abundance were quite low as revealed by amoA gene analyses. Correlation analysis indicates that the abundance of the archaeal amoA genes was correlated with the sediment organic matter content. Thus, it is possible that the amoA-carrying archaea here might utilize organic matter for a living. The affiliation of certain archaeal amoA sequences to the GenBank sequences originally obtained from deep-sea hydrothermal vent environments indicated that the related AEA either have a wide range of temperature adaptation or they have a thermophilic evolutionary history in the modern cold deep-sea sediments of the Okhotsk Sea. The dominance of ammonia-oxidizing bacteria over AEA may indicate that bacteria play a significant role in nitrification in the Okhotsk Sea cold seep sediments.

  9. Diel foraging behavior of gravid leatherback sea turtles in deep waters of the Caribbean Sea.

    Science.gov (United States)

    Casey, James; Garner, Jeanne; Garner, Steve; Williard, Amanda Southwood

    2010-12-01

    It is generally assumed that leatherback turtles (Dermochelys coriacea), like other species of sea turtle, do not feed while offshore from nesting beaches, and rely instead on fat reserves to fuel reproductive activities. Recent studies, however, provide evidence that leatherbacks may forage during the internesting interval while offshore in the Western Atlantic Ocean and Caribbean Sea. Bio-logging technology was used to investigate the foraging behavior of female leatherback turtles at St Croix, US Virgin Islands. Leatherback gastrointestinal tract temperatures (T(GT)) were analyzed for sudden fluctuations indicative of ingestions, and laboratory ingestion simulations were used to characterize temperature fluctuations associated with ingestion of prey versus seawater. Dive patterns associated with prey ingestion were characterized and the proportion of prey ingestion during the day (05:00-18:59 h) and night (19:00-04:59 h) were compared. A combined total of 111 prey ingestions for seven leatherback turtles were documented during the internesting interval. The number of prey ingestions ranged from six to 48 for individual turtles, and the majority (87.4%) of these events occurred during the daytime. Prey ingestions were most frequently associated with V-shaped dives, and the mean (±1 s.d.) maximum dive depth with prey ingestion ranged from 154±51 to 232±101 m for individual turtles. Although leatherbacks were found to opportunistically feed during the internesting interval, the low prey ingestion rates indicate that energy reserves acquired prior to the breeding season are critical for successful reproduction by leatherbacks from the St Croix, USVI nesting population.

  10. Stratigraphy, climate and downhole logging data - an example from the ICDP Dead Sea deep drilling project

    Science.gov (United States)

    Coianiz, Lisa; Ben-Avraham, Zvi; Lazar, Michael

    2017-04-01

    During the late Quaternary a series of lakes occupied the Dead Sea tectonic basin. The sediments that accumulated within these lakes preserved the environmental history (tectonic and climatic) of the basin and its vicinity. Most of the information on these lakes was deduced from exposures along the marginal terraces of the modern Dead Sea, e.g. the exposures of the last glacial Lake Lisan and Holocene Dead Sea. The International Continental Drilling Program (ICDP) project conducted in the Dead Sea during 2010-2011 recovered several cores that were drilled in the deep depocenter of the lake (water depth of 300 m) and at the margin (depth of 3 m offshore Ein Gedi spa). New high resolution logging data combined with a detailed lithological description and published age models for the deep 5017-1-A borehole were used to establish a sequence stratigraphic framework for the Lakes Amora, Samra, Lisan and Zeelim strata. This study presents a stratigraphic timescale for reconstructing the last ca 225 ka. It provides a context within which the timing of key sequence surfaces identified in the distal part of the basin can be mapped on a regional and stratigraphic time frame. In addition, it permitted the examination of depositional system tracts and related driving mechanisms controlling their formation. The sequence stratigraphic model developed for the Northern Dead Sea Basin is based on the identification of sequence bounding surfaces including: sequence boundary (SB), transgressive surface (TS) and maximum flooding surface (MFS). They enabled the division of depositional sequences into a Lowstand systems tracts (LST), Transgressive systems tracts (TST) and Highstand systems tracts (HST), which can be interpreted in terms of relative lake level changes. The analysis presented here show that system tract stacking patterns defined for the distal 5017-1-A borehole can be correlated to the proximal part of the basin, and widely support the claim that changes in relative lake

  11. Deep-sea benthic community and environmental impact assessment at the Atlantic Frontier

    Science.gov (United States)

    Gage, John D.

    2001-05-01

    The seabed community provides a sensitive litmus for environmental change. North Sea analysis of benthic populations provides an effective means for monitoring impacts from man's interventions, such as offshore oil exploitation and fishing, against baseline knowledge of the environment. Comparable knowledge of the benthic biology in the deep waters of the Atlantic Frontier beyond the N.E. Atlantic shelf edge is poorly developed. But uncertainties should not encourage assumptions and extrapolations from the better-known conditions on the continental shelf. While sampling at present still provides the best means to assess the health of the deepwater benthic habitat, protocols developed for deep-sea fauna should be applied. These are necessary because of (a) lower faunal densities, (b) higher species richness, (c) smaller body size, and (d) to ensure comparability with other deep-sea data. As in the North Sea, species richness and relative abundance can be analysed from quantitative samples in order to detect impacts. But analysis based on taxonomic sufficiency above species level is premature, even if arguably possible for coastal communities. Measures also need to ensure identifications are not forced to more familiar coastal species without proper study. Species-level analysis may be applied to seabed photographs of megafauna in relation to data on bottom environment, such as currents and the sediment, to monitor the health of the deep-water community. Although the composition of higher taxa in the benthic community is broadly similar to soft sediments on the shelf, concordance in sensitivities is speculative. Moreover, new organisms occur, such as giant protozoan xenophyophores, unknown on the continental shelf, whose sensitivities remain conjectural. Past knowledge of the benthic biology of the deep-water areas off Scotland is based on scattered stations and some more focussed, multidisciplinary studies, and should be significantly augmented by the results from

  12. Thermophilic hydrogen-producing bacteria inhabiting deep-sea hydrothermal environments represented by Caloranaerobacter.

    Science.gov (United States)

    Jiang, Lijing; Xu, Hongxiu; Zeng, Xiang; Wu, Xiaobing; Long, Minnan; Shao, Zongze

    2015-11-01

    Hydrogen is an important energy source for deep-sea hydrothermal vent ecosystems. However, little is known about microbes and their role in hydrogen turnover in the environment. In this study, the diversity and physiological characteristics of fermentative hydrogen-producing microbes from deep-sea hydrothermal vent fields were described for the first time. Seven enrichments were obtained from hydrothermal vent sulfides collected from the Southwest Indian Ocean, East Pacific and South Atlantic. 16S rRNA gene analysis revealed that members of the Caloranaerobacter genus were the dominant component in these enrichments. Subsequently, three thermophilic hydrogen producers, strains H363, H53214 and DY22619, were isolated. They were phylogenetically related to species of the genus Caloranaerobacter. The H2 yields of strains H363, H53214, DY22619 and MV107, which was the type species of genus Caloranaerobacter, were 0.11, 1.21, 3.13 and 2.85 mol H2/mol glucose, respectively. Determination of the main soluble metabolites revealed that strains H363, H53214 and MV107 performed heterolactic fermentations, while strain DY22619 performed butyric acid fermentation, indicating distinct fermentation patterns among members of the genus. Finally, a diversity of forms of [FeFe]-hydrogenase with different modular structures was revealed based on draft genomic data of Caloranaerobacter strains. This highlights the complexity of hydrogen metabolism in Caloranaerobacter, reflecting adaptations to environmental conditions in hydrothermal vent systems. Collectively, results suggested that Caloranaerobacter species might be ubiquitous and play a role in biological hydrogen generation in deep-sea hydrothermal vent fields. Copyright © 2015 Institut Pasteur. Published by Elsevier Masson SAS. All rights reserved.

  13. Characterization of lignocellulolytic activities from fungi isolated from the deep-sea sponge Stelletta normani.

    Directory of Open Access Journals (Sweden)

    Ramón Alberto Batista-García

    Full Text Available Extreme habitats have usually been regarded as a source of microorganisms that possess robust proteins that help enable them to survive in such harsh conditions. The deep sea can be considered an extreme habitat due to low temperatures (<5°C and high pressure, however marine sponges survive in these habitats. While bacteria derived from deep-sea marine sponges have been studied, much less information is available on fungal biodiversity associated with these sponges. Following screening of fourteen fungi isolated from the deep-sea sponge Stelletta normani sampled at a depth of 751 metres, three halotolerant strains (TS2, TS11 and TS12 were identified which displayed high CMCase and xylanase activities. Molecular based taxonomic approaches identified these strains as Cadophora sp. TS2, Emericellopsis sp. TS11 and Pseudogymnoascus sp. TS 12. These three fungi displayed psychrotolerance and halotolerant growth on CMC and xylan as sole carbon sources, with optimal growth rates at 20°C. They produced CMCase and xylanase activities, which displayed optimal temperature and pH values of between 50-70°C and pH 5-8 respectively, together with good thermostability and halotolerance. In solid-state fermentations TS2, TS11 and TS12 produced CMCases, xylanases and peroxidase/phenol oxidases when grown on corn stover and wheat straw. This is the first time that CMCase, xylanase and peroxidase/phenol oxidase activities have been reported in these three fungal genera isolated from a marine sponge. Given the biochemical characteristics of these ligninolytic enzymes it is likely that they may prove useful in future biomass conversion strategies involving lignocellulosic materials.

  14. Molecular Characterization of a Novel N-Acetylneuraminate Lyase from a Deep-Sea Symbiotic Mycoplasma

    Directory of Open Access Journals (Sweden)

    Shao-lu Wang

    2018-03-01

    Full Text Available N-acetylneuraminic acid (Neu5Ac based novel pharmaceutical agents and diagnostic reagents are highly required in medical fields. However, N-acetylneuraminate lyase(NAL)for Neu5Ac synthesis is not applicable for industry due to its low catalytic efficiency. In this study, we biochemically characterized a deep-sea NAL enzyme (abbreviated form: MyNal from a symbiotic Mycoplasma inhabiting the stomach of a deep-sea isopod, Bathynomus jamesi. Enzyme kinetic studies of MyNal showed that it exhibited a very low Km for both cleavage and synthesis activities compared to previously described NALs. Though it favors the cleavage process, MyNal out-competes the known NALs with respect to the efficiency of Neu5Ac synthesis and exhibits the highest kcat/Km values. High expression levels of recombinant MyNal could be achieved (9.56 mol L−1 culture with a stable activity in a wide pH (5.0–9.0 and temperature (40–60 °C range. All these features indicated that the deep-sea NAL has potential in the industrial production of Neu5Ac. Furthermore, we found that the amino acid 189 of MyNal (equivalent to Phe190 in Escherichia coli NAL, located in the sugar-binding domain, GX189DE, was also involved in conferring its enzymatic features. Therefore, the results of this study improved our understanding of the NALs from different environments and provided a model for protein engineering of NAL for biosynthesis of Neu5Ac.

  15. Long-term viability of carbon sequestration in deep-sea sediments

    Science.gov (United States)

    Teng, Y.; Zhang, D.

    2017-12-01

    Sequestration of carbon dioxide in deep-sea sediments has been proposed for the long-term storage of anthropogenic CO2, due to the negative buoyancy effect and hydrate formation under conditions of high pressure and low temperature. However, the multi-physics process of injection and post-injection fate of CO2 and the feasibility of sub-seabed disposal of CO2 under different geological and operational conditions have not been well studied. On the basis of a detailed study of the coupled processes, we investigate whether storing CO2 into deep-sea sediments is viable, efficient, and secure over the long term. Also studied are the evolution of the multiphase and multicomponent flow and the impact of hydrate formation on storage efficiency during the upward migration of the injected CO2. It is shown that low buoyancy and high viscosity slow down the ascending plume and the forming of the hydrate cap effectively reduces the permeability and finally becomes an impermeable seal, thus limiting the movement of CO2 towards the seafloor. Different flow patterns at varied time scales are identified through analyzing the mass distribution of CO2 in different phases over time. Observed is the formation of a fluid inclusion, which mainly consists of liquid CO2 and is encapsulated by an impermeable hydrate film in the diffusion-dominated stage. The trapped liquid CO2 and CO2 hydrate finally dissolve into the pore water through diffusion of the CO2 component. Sensitivity analyses are performed on storage efficiency under variable geological and operational conditions. It is found that under a deep-sea setting, CO2 sequestration in intact marine sediments is generally safe and permanent.

  16. Deep-sea coral record of human impact on watershed quality in the Mississippi River Basin

    Science.gov (United States)

    Prouty, Nancy G.; Roark, E. Brendan; Koenig, Alan E.; Demopoulos, Amanda W. J.; Batista, Fabian C.; Kocar, Benjamin D.; Selby, David; McCarthy, Matthew D.; Mienis, Furu

    2014-01-01

    One of the greatest drivers of historical nutrient and sediment transport into the Gulf of Mexico is the unprecedented scale and intensity of land use change in the Mississippi River Basin. These landscape changes are linked to enhanced fluxes of carbon and nitrogen pollution from the Mississippi River, and persistent eutrophication and hypoxia in the northern Gulf of Mexico. Increased terrestrial runoff is one hypothesis for recent enrichment in bulk nitrogen isotope (δ15N) values, a tracer for nutrient source, observed in a Gulf of Mexico deep-sea coral record. However, unambiguously linking anthropogenic land use change to whole scale shifts in downstream Gulf of Mexico biogeochemical cycles is difficult. Here we present a novel approach, coupling a new tracer of agro-industrialization to a multiproxy record of nutrient loading in long-lived deep-sea corals collected in the Gulf of Mexico. We found that coral bulk δ15N values are enriched over the last 150–200 years relative to the last millennia, and compound-specific amino acid δ15N data indicate a strong increase in baseline δ15N of nitrate as the primary cause. Coral rhenium (Re) values are also strongly elevated during this period, suggesting that 34% of Re is of anthropogenic origin, consistent with Re enrichment in major world rivers. However, there are no pre-anthropogenic measurements of Re to confirm this observation. For the first time, an unprecedented record of natural and anthropogenic Re variability is documented through coral Re records. Taken together, these novel proxies link upstream changes in water quality to impacts on the deep-sea coral ecosystem.

  17. Fish food in the deep sea: revisiting the role of large food-falls.

    Directory of Open Access Journals (Sweden)

    Nicholas D Higgs

    Full Text Available The carcasses of large pelagic vertebrates that sink to the seafloor represent a bounty of food to the deep-sea benthos, but natural food-falls have been rarely observed. Here were report on the first observations of three large 'fish-falls' on the deep-sea floor: a whale shark (Rhincodon typus and three mobulid rays (genus Mobula. These observations come from industrial remotely operated vehicle video surveys of the seafloor on the Angola continental margin. The carcasses supported moderate communities of scavenging fish (up to 50 individuals per carcass, mostly from the family Zoarcidae, which appeared to be resident on or around the remains. Based on a global dataset of scavenging rates, we estimate that the elasmobranch carcasses provided food for mobile scavengers over extended time periods from weeks to months. No evidence of whale-fall type communities was observed on or around the carcasses, with the exception of putative sulphide-oxidising bacterial mats that outlined one of the mobulid carcasses. Using best estimates of carcass mass, we calculate that the carcasses reported here represent an average supply of carbon to the local seafloor of 0.4 mg m(-2d(-1, equivalent to ∼ 4% of the normal particulate organic carbon flux. Rapid flux of high-quality labile organic carbon in fish carcasses increases the transfer efficiency of the biological pump of carbon from the surface oceans to the deep sea. We postulate that these food-falls are the result of a local concentration of large marine vertebrates, linked to the high surface primary productivity in the study area.

  18. Characterization of lignocellulolytic activities from fungi isolated from the deep-sea sponge Stelletta normani.

    Science.gov (United States)

    Batista-García, Ramón Alberto; Sutton, Thomas; Jackson, Stephen A; Tovar-Herrera, Omar Eduardo; Balcázar-López, Edgar; Sánchez-Carbente, María Del Rayo; Sánchez-Reyes, Ayixon; Dobson, Alan D W; Folch-Mallol, Jorge Luis

    2017-01-01

    Extreme habitats have usually been regarded as a source of microorganisms that possess robust proteins that help enable them to survive in such harsh conditions. The deep sea can be considered an extreme habitat due to low temperatures (<5°C) and high pressure, however marine sponges survive in these habitats. While bacteria derived from deep-sea marine sponges have been studied, much less information is available on fungal biodiversity associated with these sponges. Following screening of fourteen fungi isolated from the deep-sea sponge Stelletta normani sampled at a depth of 751 metres, three halotolerant strains (TS2, TS11 and TS12) were identified which displayed high CMCase and xylanase activities. Molecular based taxonomic approaches identified these strains as Cadophora sp. TS2, Emericellopsis sp. TS11 and Pseudogymnoascus sp. TS 12. These three fungi displayed psychrotolerance and halotolerant growth on CMC and xylan as sole carbon sources, with optimal growth rates at 20°C. They produced CMCase and xylanase activities, which displayed optimal temperature and pH values of between 50-70°C and pH 5-8 respectively, together with good thermostability and halotolerance. In solid-state fermentations TS2, TS11 and TS12 produced CMCases, xylanases and peroxidase/phenol oxidases when grown on corn stover and wheat straw. This is the first time that CMCase, xylanase and peroxidase/phenol oxidase activities have been reported in these three fungal genera isolated from a marine sponge. Given the biochemical characteristics of these ligninolytic enzymes it is likely that they may prove useful in future biomass conversion strategies involving lignocellulosic materials.

  19. Colonization of habitat islands in the deep sea: recruitment to glass sponge stalks

    Science.gov (United States)

    Beaulieu, Stace E.

    2001-04-01

    Biogenic structures in the deep sea often act as hard substratum 'islands' for the attachment of encrusting fauna. At an abyssal station in the NE Pacific, stalks of hexactinellid sponges in the genus Hyalonema are habitat islands for species-rich epifaunal communities. An experimental study was conducted to (1) determine the colonization rates of artificial Hyalonema stalks, (2) compare the species composition and diversity of recruits to newly available substrata to that of the natural communities, and (3) examine the vertical distribution of recruits. Four sets of six artificial sponge stalks, constructed of Hyalonema spicules, were deployed at 4100 m depth for 3- to 5-month periods. There was no difference in net colonization or immigration rate among the four deployments. Colonization rates were similar to those reported for other deep-sea, hard substratum recruitment experiments. The taxa that recruited to the artificial stalks were a subset of the taxa found in natural communities. However, several taxa important in structuring natural communities did not recruit to the artificial stalks. The two taxa with the highest invasion rates, a calcareous foraminiferan ( Cibicides lobatulus) and a serpulid polychaete ( Bathyvermilia sp.), also were the two taxa with greatest relative abundance in natural communities. Vertical distributions of Cibicides and an agglutinated foraminiferan ( Telammina sp.) were skewed towards the top of the artificial stalks, potentially because of active habitat selection. These results have several implications for natural Hyalonema stalk communities. Most importantly, species composition and abundance of individuals in the stalk communities appear to be maintained by frequent recruitment of a few common taxa and infrequent recruitment of many rare taxa. An argument is presented for temporal-mosaic maintenance of diversity in these deep-sea, hard substratum communities.

  20. Impacts of the Deepwater Horizon oil spill on deep-sea coral-associated sediment communities

    Science.gov (United States)

    Demopoulos, Amanda W.J.; Bourque, Jill R.; Cordes, Erik E.; Stamler, Katherine

    2016-01-01

    Cold-water corals support distinct populations of infauna within surrounding sediments that provide vital ecosystem functions and services in the deep sea. Yet due to their sedentary existence, infauna are vulnerable to perturbation and contaminant exposure because they are unable to escape disturbance events. While multiple deep-sea coral habitats were injured by the 2010 Deepwater Horizon (DWH) oil spill, the extent of adverse effects on coral-associated sediment communities is unknown. In 2011, sediments were collected adjacent to several coral habitats located 6 to 183 km from the wellhead in order to quantify the extent of impact of the DWH spill on infaunal communities. Higher variance in macrofaunal abundance and diversity, and different community structure (higher multivariate dispersion) were associated with elevated hydrocarbon concentrations and contaminants at sites closest to the wellhead (MC294, MC297, and MC344), consistent with impacts from the spill. In contrast, variance in meiofaunal diversity was not significantly related to distance from the wellhead and no other community metric (e.g. density or multivariate dispersion) was correlated with contaminants or hydrocarbon concentrations. Concentrations of polycyclic aromatic hydrocarbons (PAH) provided the best statistical explanation for observed macrofaunal community structure, while depth and presence of fine-grained mud best explained meiofaunal community patterns. Impacts associated with contaminants from the DWH spill resulted in a patchwork pattern of infaunal community composition, diversity, and abundance, highlighting the role of variability as an indicator of disturbance. These data represent a useful baseline for tracking post-spill recovery of these deep-sea communities.

  1. Feeding strategies and resource partitioning among elasmobranchs and cephalopods in Mediterranean deep-sea ecosystems

    Science.gov (United States)

    Valls, Maria; Rueda, Lucía; Quetglas, Antoni

    2017-10-01

    Cephalopods and elasmobranchs are important components of marine ecosystems, whereby knowing the ecological role they play in the structure and dynamics of trophic networks is paramount. With this aim, stomach contents and stable isotopes of the most abundant elasmobranch and cephalopod species (5 and 18 species, respectively) inhabiting deep-sea ecosystems from the western Mediterranean were analyzed. The predators investigated encompassed different taxonomic groups, such as rays and sharks within elasmobranchs, and squids, octopuses and cuttlefishes within cephalopods. Specifically, we investigated ontogenetic shifts in diet, feeding strategies and prey consumption, trophic structure and potential dietary overlap between and within both taxonomical groups. Stable isotope analysis revealed ontogenetic shifts in diet in three elasmobranch (rays and sharks) and two cephalopod (octopuses and squids) species. Isotopic data showed a contrasting food source gradient (δ13C), from pelagic (squids and cuttlefishes) to benthic (octopuses and elasmobranchs). Stomach data highlighted a great variety of trophic guilds which could be further aggregated into three broad categories: benthic, benthopelagic and pelagic feeders. The combination of both stomach content and stable isotope analyses revealed a clear food partitioning among species. Mesopelagic prey were found to be an important food resource for deep-sea elasmobranchs and cephalopods, which could be related to the strong oligotrophic conditions in the area. The observed differences in feeding strategies within cephalopods and elasmobranchs should be taken into account when defining functional groups in trophodynamic models from the western Mediterranean. Our results also revealed that cephalopods play a key role for the benthopelagic coupling, whereas demersal elasmobranchs contribute primarily to a one-way flux accumulating energy resources into deep-sea ecosystems.

  2. Deep-sea coral record of human impact on watershed quality in the Mississippi River Basin

    Science.gov (United States)

    Prouty, N.; Roark, B.; Koenig, A.; Batista, F. C.; Kocar, B. D.; Selby, D. S.; Mccarthy, M. D.; Mienis, F.; Ross, S. W.; Demopoulos, A. W.

    2015-12-01

    One of the greatest drivers of historical nutrient and sediment transport into the Gulf of Mexico is the unprecedented scale and intensity of land use change in the Mississippi River Basin. These landscape changes are linked to enhanced fluxes of carbon and nitrogen pollution from the Mississippi River, and persistent eutrophication and hypoxia in the northern Gulf of Mexico. Increased terrestrial runoff is one hypothesis for recent enrichment in bulk nitrogen isotope (δ15N) values, a tracer for nutrient source, observed in a Gulf of Mexico deep-sea coral record. However, unambiguously linking anthropogenic land use change to whole scale shifts in downstream Gulf of Mexico biogeochemical cycles is difficult. Here we present a novel approach, coupling a new tracer of agro-industrialization to a multiproxy record of nutrient loading in long-lived deep-sea corals collected in the Gulf of Mexico. We found that coral bulk δ15N values are enriched over the last 150-200 years relative to the last millennia, and compound-specific amino acid δ15N data indicate a strong increase in baseline δ15N of nitrate as the primary cause. Coral rhenium (Re) values are also strongly elevated during this period, suggesting that 34% of Re is of anthropogenic origin, consistent with Re enrichment in major world rivers. However, there are no pre-anthropogenic measurements of Re to confirm this observation. For the first time, an unprecedented record of natural and anthropogenic Re variability is documented through coral Re records. Taken together, these novel proxies link upstream changes in water quality to impacts on the deep-sea coral ecosystem.

  3. Diverse, rare microbial taxa responded to the Deepwater Horizon deep-sea hydrocarbon plume.

    Science.gov (United States)

    Kleindienst, Sara; Grim, Sharon; Sogin, Mitchell; Bracco, Annalisa; Crespo-Medina, Melitza; Joye, Samantha B

    2016-02-01

    The Deepwater Horizon (DWH) oil well blowout generated an enormous plume of dispersed hydrocarbons that substantially altered the Gulf of Mexico's deep-sea microbial community. A significant enrichment of distinct microbial populations was observed, yet, little is known about the abundance and richness of specific microbial ecotypes involved in gas, oil and dispersant biodegradation in the wake of oil spills. Here, we document a previously unrecognized diversity of closely related taxa affiliating with Cycloclasticus, Colwellia and Oceanospirillaceae and describe their spatio-temporal distribution in the Gulf's deepwater, in close proximity to the discharge site and at increasing distance from it, before, during and after the discharge. A highly sensitive, computational method (oligotyping) applied to a data set generated from 454-tag pyrosequencing of bacterial 16S ribosomal RNA gene V4-V6 regions, enabled the detection of population dynamics at the sub-operational taxonomic unit level (0.2% sequence similarity). The biogeochemical signature of the deep-sea samples was assessed via total cell counts, concentrations of short-chain alkanes (C1-C5), nutrients, (colored) dissolved organic and inorganic carbon, as well as methane oxidation rates. Statistical analysis elucidated environmental factors that shaped ecologically relevant dynamics of oligotypes, which likely represent distinct ecotypes. Major hydrocarbon degraders, adapted to the slow-diffusive natural hydrocarbon seepage in the Gulf of Mexico, appeared unable to cope with the conditions encountered during the DWH spill or were outcompeted. In contrast, diverse, rare taxa increased rapidly in abundance, underscoring the importance of specialized sub-populations and potential ecotypes during massive deep-sea oil discharges and perhaps other large-scale perturbations.

  4. Deciphering Equatorial Pacific Deep Sea Sediment Transport Regimes by Core-Log-Seismic Integration

    Science.gov (United States)

    Ortiz, E.; Tominaga, M.; Marcantonio, F.

    2017-12-01

    Investigating deep-sea sediment transportation and deposition regimes is a key to accurately understand implications from geological information recorded by pelagic sediments, e.g. climate signals. However, except for physical oceanographic particle trap experiments, geochemical analyses of in situsediments, and theoretical modeling of the relation between the bottom currents and sediment particle flux, it has remained a challenging task to document the movement of deep sea sediments, that takes place over time. We utilized high-resolution, multichannel reflection seismic data from the eastern equatorial Pacific region with drilling and logging results from two Integrated Ocean Drilling Program (IODP) sites, the Pacific Equatorial Age Transect (PEAT) 7 (Site U1337) and 8 (Site U1338), to characterize sediment transportation regimes on 18-24 Ma oceanic crust. Site U1337, constructed by a series of distinct abyssal hills and abyssal basins; Site U1338, located 570 km SE from Site U1337 site and constructed by a series of ridges, seamounts, and abyssal hills. These sites are of particular interest due to their proximity to the equatorial productivity zone, areas with high sedimentation rates and preservation of carbonate-bearing sediment that provide invaluable insights on equatorial Pacific ecosystems and carbon cycle. We integrate downhole geophysical logging data as well as geochemistry and physical properties measurements on recovered cores from IODP Sites U1337 and U1338 to comprehensively examine the mobility of deep-sea sediments and sediment diagenesis over times in a quasi-3D manner. We also examine 1100 km of high resolution underway seismic surveys from site survey lines in between PEAT 7 and 8 in order to investigate changes in sediment transportation between both sites. Integrating detailed seismic interpretations, high resolution core data, and 230Th flux measurements we aim to create a detailed chronological sedimentation and sediment diagenesis history

  5. Benthic Foraminifera, Food in the Deep Sea, and Limits to Bentho-Pelagic Coupling

    Science.gov (United States)

    Thomas, E.; Boscolo-Galazzo, F.; Arreguin-Rodrigu, G. J.; Ortiz, S.; Alegret, L.

    2015-12-01

    The deep-sea is the largest habitat on Earth, contains highly diverse biota, but is very little known. Many of its abundant benthic biota (e.g., nematodes) are not preserved in the fossil record. Calcareous and agglutinated benthic foraminifera (unicellular eukaryotes, Rhizaria; efficient dispersers) and ostracodes (Animalia, Crustacea; non-efficient dispersers) are the most common organisms providing a fossil record of deep-sea environments. Very little food is supplied to the deep-sea, because organic matter produced by photosynthesis is largely degraded before it arrives at the seafloor. Only a few % of organic matter is carried to the ocean bottom by 'marine snow', with its particle size and behavior in the water column controlled by surface ecosystem structure, including type of dominant primary producers (diatoms, cyanobacteria). Food supply and its seasonality are generally seen as the dominant control on benthic assemblages (combined with oxygenation), providing bentho-pelagic coupling between primary and benthic productivity. Benthic foraminiferal assemblages (composition and density) thus are used widely to estimate past productivity, especially during episodes of global climate change, ocean acidification, and mass extinction of primary producers. We show that some environmental circumstances may result in interrupting bentho-pelagic coupling, e.g. through lateral supply of organic matter along continental margins (adding more refractory organic matter), through trophic focusing and/or fine particle winnowing on seamounts (giving an advantage to suspension feeders), and through carbonate undersaturation (giving advantage to infaunal over epifaunal calcifyers). In addition, increased remineralization of organic matter combined with increased metabolic rates may cause assemblages to reflect more oligotrophic conditions at stable primary productivity during periods of global warming. As a result, benthic foraminiferal accumulation rates must be carefully

  6. Digital and Analog Electronics for an autonomous, deep-sea, Gamma Ray Burst Neutrino prototype detector

    Directory of Open Access Journals (Sweden)

    Manolopoulos K.

    2016-01-01

    Full Text Available GRBNeT is a Gamma Ray Burst Neutrino Telescope made of autonomously operated arrays of deep-sea light detectors, anchored to the sea-bed without any cabled connection to the shore. This paper presents the digital and analog electronics that we have designed and developed for the GRBNeT prototype. We describe the requirements for these electronics and present their design and functionality. We present low-power analog electronics for the PMTs utilized in the GRBNeT prototype and the FPGA based digital system for data selection and storage. We conclude with preliminary performance measurements of the electronics systems for the GRBNeT prototype.

  7. Application of Moessbauer spectroscopy to the study of neptunium adsorbed on deep-sea sediments

    International Nuclear Information System (INIS)

    Bennett, B.A.; Rees, L.V.C.

    1987-03-01

    A Neptunium Moessbauer spectrometer (the first in Great Britain) was constructed and the Moessbauer spectra of NpAl Laves phase alloy obtained. Neptunium was sorbed onto a calcareous deep-sea sediment from sea water, using a successive-loading technique. Sorption appeared to be by an equilibrium reaction, and because of the low solubility of neptunium in seawater, this meant that the maximum loading that could be achieved was 8mg 237 Np/g sediment. This proved to be an adequate concentration for Moessbauer measurements and a Moessbauer spectrum was obtained. This showed that most of the neptunium was in exchange sites and not present as precipitates of neptunium compounds. It was probably in the 4+ state indicating that reduction had occurred during sorption. This work has demonstrated that Moessbauer Spectroscopy has great potential as an aid to understanding the mechanism of actinide sorption in natural systems. (author)

  8. Silicon Isotope Variations in Giant Spicules of the Deep-sea Sponge Monorhaphis chuni

    Science.gov (United States)

    Jochum, K. P.; Schuessler, J. A.; Wang, X.; Müller, W. E.; Andreae, M. O.

    2012-12-01

    The astonishing longevity of the deep-sea sponge Monorhaphis chuni and the stability of their spicules (Wang et al. 2009) provide the potential that single giant basal spicules can be used as paleoenvironmental archives spanning the entire Holocene (Jochum et al. 2012). According to Wille et al. (2010), the Si isotope fractionation is influenced by seawater Si concentration with lower values associated with sponges collected from waters high in Si. In order to track possible secular variations during the last 10000 years in the deep sea, we have therefore determined Si isotope ratios and trace element ratios along center-to-surface sections at a high resolution by femtosecond LA-(MC)-ICP-MS. Samples came from different locations of the East and South China Sea as well as the South Pacific Ocean (near New Caledonia) and were collected at depths between 1100 m and 2100 m. The external reproducibility of the fs LA-(MC)-ICP-MS method was found to be 0.14 ‰ and 0.27 ‰ (2 SD) for δ29Si and δ30Si, respectively. The relative uncertainty on trace element abundance ratios, such as Mg/Ca, is about 5 % (RSD). Significant variations in Si isotope ratios were observed in the giant spicules Q-B and SCS-4 from the East and South China Sea, respectively. The δ30Si values for the largest spicule collected so far (SCS-4, 2.5 m long) from a depth of 2100 m in the South China Sea, span a large range from -1.9 to -3.7 ‰. No obvious trend in Si isotope variability outside external reproducibility could be identified in smaller and presumably younger spicules; average δ30Si values of 4 different segments of the spicule MC from the South China Sea are about -1.3 ‰. Low δ30Si values of about -0.88 ‰ are found in the giant spicule V from the South Pacific. Mg/Ca ratios of most spicules show small, but significant trends from higher values at the rim to lower values in the core, which can be interpreted as an increase in seawater temperature of several degrees Celsius during

  9. Burial diagenesis of deep sea chalk as reflected in Biot's coefficient

    DEFF Research Database (Denmark)

    Fabricius, Ida Lykke; Alam, Mohammad Monzurul

    2013-01-01

    to limestone as burial increases and porosity decreases. The porosity decrease is accompanied by an increasing velocity to elastic waves, and consequently a decreasing Biot's coefficient, as estimated from velocity and density of core samples. When the effective burial stress is normalized to total horizontal....... In the ooze, we find that the natural compaction causes an increasing stress on grain contact area, indicating that the ooze particles become strongly strained. In the chalk section, contact cement is probably the reason why particles become less strained as porosity declines. In the limestone, stress...... on particles apparently is low and not correlated with porosity, probably because the pore-filling cementation in this interval causes Biot's coefficient to decline as burial increases. Limestone from the water zone of the North sea Chalk Group follows the same stress trend as deep sea limestone. These results...

  10. Size and Carbon Content of Sub-seafloor Microbial Cells at Landsort Deep, Baltic Sea

    DEFF Research Database (Denmark)

    Braun, Stefan; Morono, Yuki; Littmann, Sten

    2016-01-01

    determined the volume and the carbon content of microbial cells from a marine sediment drill core retrieved by the Integrated Ocean Drilling Program (IODP), Expedition 347, at Landsort Deep, Baltic Sea. To determine their shape and volume, cells were separated from the sediment matrix by multi-layer density......-specific carbon content was 19–31 fg C cell−1, which is at the lower end of previous estimates that were used for global estimates of microbial biomass. The cell-specific carbon density increased with sediment depth from about 200 to 1000 fg C μm−3, suggesting that cells decrease their water content and grow...... small cell sizes as adaptation to the long-term subsistence at very low energy availability in the deep biosphere. We present for the first time depth-related data on the cell volume and carbon content of sedimentary microbial cells buried down to 60 m below the seafloor. Our data enable estimates...

  11. Determination of strange sea distributions from {nu}N deep inelastic scattering

    Energy Technology Data Exchange (ETDEWEB)

    Alekhin, S. [Deutsches Elektronen-Synchrotron (DESY), Zeuthen (Germany)]|[Inst. for High Energy Physics, Protvino (Russian Federation); Kulagin, S. [Academy of Sciences of Russia, Moscow (Russian Federation). Inst. for Nuclear Research; Petti, R. [South Carolina Univ., Columbia, SC (United States). Dept. of Physics and Astronomy

    2008-12-15

    We present an analysis of the nucleon strange sea extracted from a global Parton Distribution Function fit including the neutrino and anti-neutrino dimuon data by the CCFR and NuTeV collaborations, the inclusive charged lepton-nucleon Deep Inelastic Scattering and Drell-Yan data. The (anti-)neutrino induced dimuon analysis is constrained by the semi-leptonic charmed-hadron branching ratio B{sub {mu}}=(8.8{+-}0.5)%, determined from the inclusive charmed hadron measurements performed by the FNAL-E531 and CHORUS neutrino emulsion experiments. Our analysis yields a strange sea suppression factor {kappa}(Q{sup 2}=20 GeV{sup 2})=0.62{+-}0.04, the most precise value available, an x-distribution of total strange sea that is slightly softer than the non-strange sea, and an asymmetry between strange and anti-strange quark distributions consistent with zero (integrated over x it is equal to 0.0013{+-}0.0009 at Q{sup 2}=20 GeV{sup 2}). (orig.)

  12. Dead Sea deep cores: A window into past climate and seismicity

    Science.gov (United States)

    Stein, Mordechai; Ben-Avraham, Zvi; Goldstein, Steven L.

    2011-12-01

    The area surrounding the Dead Sea was the locus of humankind's migration out of Africa and thus has been the home of peoples since the Stone Age. For this reason, understanding the climate and tectonic history of the region provides valuable insight into archaeology and studies of human history and helps to gain a better picture of future climate and tectonic scenarios. The deposits at the bottom of the Dead Sea are a geological archive of the environmental conditions (e.g., rains, floods, dust storms, droughts) during ice ages and warm ages, as well as of seismic activity in this key region. An International Continental Scientific Drilling Program (ICDP) deep drilling project was performed in the Dead Sea between November 2010 and March 2011. The project was funded by the ICDP and agencies in Israel, Germany, Japan, Norway, Switzerland, and the United States. Drilling was conducted using the new Large Lake Drilling Facility (Figure 1), a barge with a drilling rig run by DOSECC, Inc. (Drilling, Observation and Sampling of the Earth's Continental Crust), a nonprofit corporation dedicated to advancing scientific drilling worldwide. The main purpose of the project was to recover a long, continuous core to provide a high resolution record of the paleoclimate, paleoenvironment, paleoseismicity, and paleomagnetism of the Dead Sea Basin. With this, scientists are beginning to piece together a record of the climate and seismic history of the Middle East during the past several hundred thousand years in millennial to decadal to annual time resolution.

  13. Support of Publication Costs, Atlantic Meridional Overturning Circulation Special Issue of Deep Sea Research II Journal

    Energy Technology Data Exchange (ETDEWEB)

    Amy Honchar

    2012-11-12

    The contribution of funds from DOE supported publication costs of a special issue of Deep Sea Research arising from presentations at the First U.S. Atlantic Meridional Overturning Circulation (AMOC) Meeting held 4-6 May, 2009 to review the US implementation plan and its coordination with other monitoring activities. The special issue includes a total of 16 papers, including publications from three DOE-supported investigators (ie Sevellec, F., and A.V. Fedorov; Hu et. al., and Wan et. al.,). The special issue addresses DOE interests in understanding and simulation/modeling of abrupt climate change.

  14. Deep-sea polymetallic nodule mining: Challenges ahead for technologists and environmentalists

    Digital Repository Service at National Institute of Oceanography (India)

    Valsangkar, A.B.

    occur beyond 4800m water depths. For over 30 years, deep-sea polymetallic nodule mining has been a subject of interest to many research groups in the world because of its identified potential for the economic recovery of large reserves of minerals... PolymetallicnoduleswerefirstdiscoveredduringthevoyagesofH.M.S.Challengerin 1873–76, (Murray and Renard 1891) but their economic value as potential ores of Ni, Cu,andCobaltwasnotrealizeduntilthelate1950s(Mero1958).Thenodulesarealso valuable for other applications such as a sorbent in gas purification...

  15. Evolution in the deep sea: biological traits, ecology and phylogenetics of pelagic copepods.

    Science.gov (United States)

    Laakmann, Silke; Auel, Holger; Kochzius, Marc

    2012-11-01

    Deep-sea biodiversity has received increasing interest in the last decade, mainly focusing on benthic communities. In contrast, studies of zooplankton in the meso- to bathypelagic zones are relatively scarce. In order to explore evolutionary processes in the pelagic deep sea, the present study focuses on copepods of two clausocalanoid families, Euchaetidae and Aetideidae, which are abundant and species-rich in the deep-sea pelagic realm. Molecular phylogenies based on concatenated-portioned data on 18S, 28S and internal transcribed spacer 2 (ITS2), as well as mitochondrial cytochrome c oxidase subunit I (COI), were examined on 13 species, mainly from Arctic and Antarctic regions, together with species-specific biological traits (i.e. vertical occurrence, feeding behaviour, dietary preferences, energy storage, and reproductive strategy). Relationships were resolved on genus, species and even sub-species levels, the latter two established by COI with maximum average genetic distances ranging from ≤5.3% at the intra-specific, and 20.6% at the inter-specific level. There is no resolution at a family level, emphasising the state of Euchaetidae and Aetideidae as sister families and suggesting a fast radiation of these lineages, a hypothesis which is further supported by biological parameters. Euchaetidae were similar in lipid-specific energy storage, reproductive strategy, as well as feeding behaviour and dietary preference. In contrast, Aetideidae were more diverse, comprising a variety of characteristics ranging from similar adaptations within Paraeuchaeta, to genera consisting of species with completely different reproductive and feeding ecologies. Reproductive strategies were generally similar within each aetideid genus, but differed between genera. Closely related species (congeners), which were similar in the aforementioned biological and ecological traits, generally occurred in different depth layers, suggesting that vertical partitioning of the water column

  16. Molecular Phylogeny Of Microbes In The Deep-Sea Sediments From Tropical West Pacific Warm Pool

    Science.gov (United States)

    Wang, F.; Xiao, X.; Wang, P.

    2005-12-01

    The presence and phylogeny of bacteria and archaea in five deep-sea sediment samples collected from west Pacific Warm Pool area (WP-0, WP-1, WP-2, WP-3, WP-4), and in five sediment layers (1cm-, 3cm-, 6cm-, 10cm-, 12cm- layer) of the 12-cm sediment core of WP-0 were checked and compared. The microbial diversity in the five deep-sea sediments were similar as revealed by denaturing gradient gel electrophoresis, and all of them contained members of non-thermophilic marine group I crenarchaeota as the predominant archaeal group. The composition of methylotrophs including methanotrophs, sulfate reducing bacteria in the WP-0 sediment core were further investigated by molecular marker based analysis of mxaF, pmoA, dsrAB, specific anoxic methane oxidation archaeal and sulfate reducing bacterial 16S rRNA genes. From MxaF amino acid sequence analysis, it was demonstrated that microbes belonging to α - Proteobacteria most related to Hyphomicrobium and Methylobacterium were dominant aerobic methylotrophs in this deep-sea sediment; and small percentage of type II methanotrophs affiliating closest to Methylocystis and Methylosinus were also detected in this environment. mxaF quantitative PCR results showed that in the west Pacific WP sediment there existed around 3× 10 4-5 methylotrophs per gram sediment, 10-100 times more than that in samples collected from several other deep-sea Pacific sediment sample, but about 10 times less than that present in samples collected from rice and flower garden soil. Diverse groups of novel archaea (named as WPA), not belonging to any known archaeal lineages were checked out. They could be placed in the euryarchaeota kingdom, separated into two distinct groups, the main group was peripherally related with methanogens, the other group related with Thermoplasma. Possible sulfate reducing bacterial related with Desulfotomaculum, Desulfacinum, Desulfomonile and Desulfanuticus were also detected in our study. The vertical distributions of WPA

  17. Are deep-sea ecosystems surrounding Madagascar threatened by land-use or climate change?

    Science.gov (United States)

    Fontanier, Christophe; Mamo, Briony; Toucanne, Samuel; Bayon, Germain; Schmidt, Sabine; Deflandre, Bruno; Dennielou, Bernard; Jouet, Gwenael; Garnier, Eline; Sakai, Saburo; Lamas, Ruth Martinez; Duros, Pauline; Toyofuku, Takashi; Salé, Aurélien; Belleney, Déborah; Bichon, Sabrina; Boissier, Audrey; Chéron, Sandrine; Pitel, Mathilde; Roubi, Angélique; Rovere, Mickaël; Grémare, Antoine; Dupré, Stéphanie; Jorry, Stéphan J.

    2018-01-01

    In this short communication, we present a multidisciplinary study of sedimentary records collected from a deep-sea interfluve proximal to the mouths of major northwestern Madagascan rivers. For the last 60 years, the seafloor has been repeatedly disturbed by the deposition of organic rich, tropical, terrestrial sediments causing marked reductions in benthic biodiversity. Increased soil erosion due to local land-use, deforestation and intensifying tropical cyclones are potential causes for this sedimentary budget and biodiversity shift. Our marine sedimentary records indicate that until now, these conditions have not occurred within the region for at least 20,000 years.

  18. Lithogenic fluxes to the deep Arabian Sea measurEd. by sediment traps

    Digital Repository Service at National Institute of Oceanography (India)

    Ramaswamy, V.; Nair, R.R; Manganini, S.J.; Haake, B.; Ittekkot, V.

    . 38. No. 2. pp 1~g-\\[~44 It,lqt. fllC~g...4)i49tql $31~) 4- 0.till Pnnted m Great Britain. ~ lg~t Pergamon Press pie Lithogenic fluxes to the deep Arabian Sea measured by sediment traps V. RAMASWAMY,* R. R. NAIR,* S. MANGANINI,# B. HAAKE~. and V... (MIct, lrdAN et al., 1984). Most of the present suspended sediment discharge is in July and August, during the peak of the southwest monsoon period, with negligible discharge during other times (I'rrEKKO'r and ARAIN, 1986). The Narmada and Tapti...

  19. Microfabric of illitic clays from the Pacific deep-sea basin

    International Nuclear Information System (INIS)

    Burkett, D.J.; Bennett, R.H.; Bryant, W.R.

    1990-01-01

    The microfabric of deep-sea illitic clays was investigated using electron microscopy in support of the In-Situ Heat Transfer Experiment (ISHTE) Simulation test (ISIMU) and the Subseabed Disposal Program (SDP). Sandia National Laboratories, ISHTE and the field exercises were designed to investigate the thermal, fluid, and mechanical response of the sediment to the emplacement of radioactive waste in the seabed. Clay fabric of an undisturbed core sample, designated RAMA, was compared to dredge, remolded, reconsolidated material in order to investigate the effects of mechanical disturbances from sediment remolding and heater probe insertion and effects of induced thermal gradients caused by heating of the sediment

  20. A sterol and spiroditerpenoids from a Penicillium sp. isolated from a deep sea sediment sample.

    Science.gov (United States)

    Li, Yan; Ye, Dezan; Shao, Zongze; Cui, Chengbin; Che, Yongsheng

    2012-02-01

    A new polyoxygenated sterol, sterolic acid (1), three new breviane spiroditerpenoids, breviones I-K (2-4), and the known breviones (5-8), were isolated from the crude extract of a Penicillium sp. obtained from a deep sea sediment sample that was collected at a depth of 5115 m. The structures of 1-4 were elucidated primarily by NMR experiments, and 1 was further confirmed by X-ray crystallography. The absolute configurations of 2 and 3 were deduced by comparison of their CD spectra with those of the model compounds. Compounds 2 and 5 showed significant cytotoxicity against MCF-7 cells, which is comparable to the positive control cisplatin.

  1. Experimental studies on the geochemical behaviour of 54-Mn considering coastal and deep sea sediments

    International Nuclear Information System (INIS)

    Guegueniat, P.; Boust, D.; Aprosi, G.

    1986-01-01

    In order to study the geochemical behaviour of 54-Mn in the marine environment (Mn 2+ ) 200 sediments gathered in deep sea and in coastal waters were contaminated experimentally. To correlate the various results, the oxidation processes occuring with or without sediments should be specified. Without sediments, in 'blanks', the deposition rate of 54-Mn on the walls brings into play oxidation developing approximately according to a single order linear function. Consequently, it is characterized by a half-life (time for half 54-Mn to be retained) very similar to a residence time (Tsub(R)). In our water samples, Tsub(R) ranged from 12 to 150 days. (author)

  2. Behaviour of long-lived radionuclides associated with deep-sea disposal of radioactive wastes

    International Nuclear Information System (INIS)

    1986-04-01

    The IAEA sponsored this Coordinated Research Programme to improve knowledge of various long-lived radionuclides likely to be dumped in the deep sea. During the three years of this programme the state of knowledge has advanced significantly in this area, and this document provides a review of the progress. The isotopes studied were mainly 238 Pu, 239 Pu, 240 Pu, 241 Am, 226 Ra, 210 Po, 90 Sr, 137 Cs, 60 Co, and 99 Tc. A separate abstract was prepared for each of the 15 papers

  3. Chemosynthetic activity prevails in deep-sea sediments of the Central Indian Basin

    Digital Repository Service at National Institute of Oceanography (India)

    Das, A.; Sujith, P.P.; Mourya, B.S.; Biche, S.U.; LokaBharathi, P.A.

    difference between the results at 4±2°C, 1 atm and 4±2°C, 500 atm. The difference could not be discerned in the time frame used for the experiment (Table 1). C/N ratios, TOC, TIC, LOM and bacterial counts In the CIB sediments, elemental C/N ratios... varied from 0.7 to infinitely large values due to very low levels of total nitrogen. TOC varied from <0.05-1.54%, TIC varied from non detectable in most of the deep-sea sediment to 10% in carbonaceous oozes. LOM varied from 0.025-0.14%. Bacterial...

  4. 'Yellow lens' eyes of a stomiatoid deep-sea fish, Malacosteus niger.

    Science.gov (United States)

    Somiya, H

    1982-07-22

    Bright yellow lenses were found in the eyes of the stomiatoid deep-sea fish, Malacosteus niger Ayres. The optical properties of the yellow lens and the retinal specializations in the eyes were examined. Absorption spectra of the yellow lens revealed two peaks at wavelengths 425 and 460 nm. The photoreceptors were all rods and were arranged in two superimposed layers. An astaxanthin-type retinal tapetum was observed in the pigment epithelium. Some chemical evidence is presented showing that the tapetal material is an astaxanthin ester. The ecological significance of the yellow lens is discussed in connection with that of Malacosteus' orbital light organ which has a reddish filter.

  5. The distribution of deep-sea sponge aggregations in the North Atlantic and implications for their effective spatial management

    Science.gov (United States)

    Howell, Kerry-Louise; Piechaud, Nils; Downie, Anna-Leena; Kenny, Andrew

    2016-09-01

    Sponge aggregations have been recognised as key component of shallow benthic ecosystems providing several important functional roles including habitat building and nutrient recycling. Within the deep-sea ecosystem, sponge aggregations may be extensive and available evidence suggests they may also play important functional roles, however data on their ecology, extent and distribution in the North Atlantic is lacking, hampering conservation efforts. In this study, we used Maximum Entropy Modelling and presence data for two deep-sea sponge aggregation types, Pheronema carpenteri aggregations and ostur aggregations dominated by geodid sponges, to address the following questions: 1) What environmental factors drive the broad-scale distribution of these selected sponge grounds? 2) What is the predicted distribution of these grounds in the northern North Atlantic, Norwegian and Barents Sea? 3) How are these sponge grounds distributed between Exclusive Economic Zones (EEZs) and High Seas areas? 4) What percentage of these grounds in High Seas areas are protected by the current High Seas MPA network? Our results suggest that silicate concentration, temperature, depth and amount of particulate organic carbon are the most important drivers of sponge distribution. Most of the sponge grounds are located within national EEZs rather than in the High Seas. Coordinated conservation planning between nations with significant areas of sponge grounds such as Iceland, Greenland and Faroes (Denmark), Norway (coastal Norway and Svalbard), Portugal and the UK, should be implemented in order to effectively manage these communities in view of the increasing level of human activity within the deep-sea environment.

  6. AMADEUS—The acoustic neutrino detection test system of the ANTARES deep-sea neutrino telescope

    Science.gov (United States)

    Aguilar, J. A.; Al Samarai, I.; Albert, A.; Anghinolfi, M.; Anton, G.; Anvar, S.; Ardid, M.; Assis Jesus, A. C.; Astraatmadja, T.; Aubert, J.-J.; Auer, R.; Barbarito, E.; Baret, B.; Basa, S.; Bazzotti, M.; Bertin, V.; Biagi, S.; Bigongiari, C.; Bou-Cabo, M.; Bouwhuis, M. C.; Brown, A.; Brunner, J.; Busto, J.; Camarena, F.; Capone, A.; Cârloganu, C.; Carminati, G.; Carr, J.; Cassano, B.; Castorina, E.; Cavasinni, V.; Cecchini, S.; Ceres, A.; Charvis, Ph.; Chiarusi, T.; Chon Sen, N.; Circella, M.; Coniglione, R.; Costantini, H.; Cottini, N.; Coyle, P.; Curtil, C.; de Bonis, G.; Decowski, M. P.; Dekeyser, I.; Deschamps, A.; Distefano, C.; Donzaud, C.; Dornic, D.; Drouhin, D.; Eberl, T.; Emanuele, U.; Ernenwein, J.-P.; Escoffier, S.; Fehr, F.; Fiorello, C.; Flaminio, V.; Fritsch, U.; Fuda, J.-L.; Gay, P.; Giacomelli, G.; Gómez-González, J. P.; Graf, K.; Guillard, G.; Halladjian, G.; Hallewell, G.; van Haren, H.; Heijboer, A. J.; Heine, E.; Hello, Y.; Hernández-Rey, J. J.; Herold, B.; Hößl, J.; de Jong, M.; Kalantar-Nayestanaki, N.; Kalekin, O.; Kappes, A.; Katz, U.; Keller, P.; Kooijman, P.; Kopper, C.; Kouchner, A.; Kretschmer, W.; Lahmann, R.; Lamare, P.; Lambard, G.; Larosa, G.; Laschinsky, H.; Le Provost, H.; Lefèvre, D.; Lelaizant, G.; Lim, G.; Lo Presti, D.; Loehner, H.; Loucatos, S.; Louis, F.; Lucarelli, F.; Mangano, S.; Marcelin, M.; Margiotta, A.; Martinez-Mora, J. A.; Mazure, A.; Mongelli, M.; Montaruli, T.; Morganti, M.; Moscoso, L.; Motz, H.; Naumann, C.; Neff, M.; Ostasch, R.; Palioselitis, D.; Păvălaş, G. E.; Payre, P.; Petrovic, J.; Picot-Clemente, N.; Picq, C.; Popa, V.; Pradier, T.; Presani, E.; Racca, C.; Radu, A.; Reed, C.; Riccobene, G.; Richardt, C.; Rujoiu, M.; Ruppi, M.; Russo, G. V.; Salesa, F.; Sapienza, P.; Schöck, F.; Schuller, J.-P.; Shanidze, R.; Simeone, F.; Spurio, M.; Steijger, J. J. M.; Stolarczyk, Th.; Taiuti, M.; Tamburini, C.; Tasca, L.; Toscano, S.; Vallage, B.; van Elewyck, V.; Vannoni, G.; Vecchi, M.; Vernin, P.; Wijnker, G.; de Wolf, E.; Yepes, H.; Zaborov, D.; Zornoza, J. D.; Zúñiga, J.

    2011-01-01

    The AMADEUS (ANTARES Modules for the Acoustic Detection Under the Sea) system which is described in this article aims at the investigation of techniques for acoustic detection of neutrinos in the deep sea. It is integrated into the ANTARES neutrino telescope in the Mediterranean Sea. Its acoustic sensors, installed at water depths between 2050 and 2300 m, employ piezo-electric elements for the broad-band recording of signals with frequencies ranging up to 125 kHz. The typical sensitivity of the sensors is around -145 dB re 1 V/μPa (including preamplifier). Completed in May 2008, AMADEUS consists of six “acoustic clusters”, each comprising six acoustic sensors that are arranged at distances of roughly 1 m from each other. Two vertical mechanical structures (so-called lines) of the ANTARES detector host three acoustic clusters each. Spacings between the clusters range from 14.5 to 340 m. Each cluster contains custom-designed electronics boards to amplify and digitise the acoustic signals from the sensors. An on-shore computer cluster is used to process and filter the data stream and store the selected events. The daily volume of recorded data is about 10 GB. The system is operating continuously and automatically, requiring only little human intervention. AMADEUS allows for extensive studies of both transient signals and ambient noise in the deep sea, as well as signal correlations on several length scales and localisation of acoustic point sources. Thus the system is excellently suited to assess the background conditions for the measurement of the bipolar pulses expected to originate from neutrino interactions.

  7. Astronomical calibration of the first Toba super-eruption from deep-sea sediments

    Science.gov (United States)

    Lee, M.; Chen, C.; Wei, K.; Iizuka, Y.

    2003-04-01

    Correlations between tephra layers interbedded within deep-sea cores and radiometrically dated volcanic eruptions provide an independent means of verifying dating techniques developed for sediment cores. Alternatively, the chronostratigraphic framework developed from marine sediments can be used to calibrate ages of land-base eruptions, if geochemical correlations can be established. In this study, we examined three deep-sea cores along an east-west transection across the South China Sea, with a distance of ~1800 to 2500 km away from the Toba caldera. The occurrence of the Oldest Toba Tuff was recognized on the basis of its geochemical characteristics, such as a high-silicate, high-potassium content and a distinct strontium isotope composition. The correlative tephra layer occurs slightly above the Australasian microtektite layer and below the Brunhes/Matuyama boundary, which in constitute three time-parallel markers for correlation and dating of Quaternary stratigraphic records. Against the astronomically tuned oxygen isotope chronostratigraphy, the rhyolitic ignimbrite erupted during the transition from marine isotope stage 20 (glacial) to stage 19 (interglacial) with an estimated age of 788 ka. The refined age is in good agreement with the radiometric age of 800+20 ka for Layer D of ODP Site 758 (Hall and Farrell, 1995), but significantly younger than the commonly referred age of 840+30 ka (Diehl et al., 1987). The mid-Pleistocene eruption expelled at least 800-1000 km3 dense-rock-equivalent of rhyolitic magma taking into account the widespread ashfall deposits in the Indian Ocean and the South China Sea basins. In spite of its exceptional magnitude, the timing of the first Toba super-eruption disputes a possible causal linkage between a major volcanic eruption and a long-term global climatic deterioration.

  8. Microbial stowaways: Addressing oil spill impacts and the artificial reef effect on deep-sea microbiomes

    Science.gov (United States)

    Hamdan, L. J.; Salerno, J. L.; Blackwell, C. A.; Little, B.; McGown, C.; Fitzgerald, L. A.; Damour, M.

    2016-02-01

    Shipwrecks enhance macro-biological diversity in the deep ocean, but, to date, studies have not explored the reef effect on deep-sea microbiological diversity. This is an important concept to address in a restoration framework, as microbial biogeochemical function impacts recruitment and adhesion of higher trophic levels on artificial reefs. In addition, microbial biofilms influence the preservation of shipwrecks through biologically mediated corrosion. Oil and gas-related activities have potential to disrupt the base of the reef trophic web; therefore, bacterial diversity and gene function at six shipwrecks (3 steel-hulled; 3 wood-hulled) in the northern Gulf of Mexico was investigated as part of the GOM-SCHEMA (Shipwreck Corrosion, Hydrocarbon Exposure, Microbiology, and Archaeology) project. Sites were selected based on proximity to the Deepwater Horizon spill's subsurface plume, depth, hull type, and existing archaeological data. Classification of taxa in sediments adjacent to and at distance from wrecks, in water, and on experimental steel coupons was used to evaluate how the presence of shipwrecks and spill contaminants in the deep biosphere influenced diversity. At all sites, and in all sample types, Proteobacteria were most abundant. Biodiversity was highest in surface sediments and in coupon biofilms adjacent to two steel-hulled wrecks in the study (Halo and Anona) and decreased with sediment depth and distance from the wrecks. Sequences associated with the iron oxidizing Mariprofundus genus were elevated at steel-hulled sites, indicating wreck-specific environmental selection. Despite evidence of the reef effect on microbiomes, bacterial composition was structured primarily by proximity to the spill and secondarily by hull material at all sites. This study provides the first evidence of an artificial reef effect on deep-sea microbial communities and suggests that biodiversity and function of primary colonizers of shipwrecks may be impacted by the spill.

  9. Microbial Diversity and Ecology in the Interfaces of the Deep-sea Anoxic Brine Pools in the Red Sea

    KAUST Repository

    Hikmawan, Tyas I.

    2015-05-01

    Deep-sea anoxic brine pools are one of the most extreme ecosystems on Earth, which are characterized by drastic changes in salinity, temperature, and oxygen concentration. The interface between the brine and overlaying seawater represents a boundary of oxic-anoxic layer and a steep gradient of redox potential that would initiate favorable conditions for divergent metabolic activities, mainly methanogenesis and sulfate reduction. This study aimed to investigate the diversity of Bacteria, particularly sulfate-reducing communities, and their ecological roles in the interfaces of five geochemically distinct brine pools in the Red Sea. Performing a comprehensive study would enable us to understand the significant role of the microbial groups in local geochemical cycles. Therefore, we combined culture-dependent approach and molecular methods, such as 454 pyrosequencing of 16S rRNA gene, phylogenetic analysis of functional marker gene encoding for the alpha subunits of dissimilatory sulfite reductase (dsrA), and single-cell genomic analysis to address these issues. Community analysis based on 16S rRNA gene sequences demonstrated high bacterial diversity and domination of Bacteria over Archaea in most locations. In the hot and multilayered Atlantis II Deep, the bacterial communities were stratified and hardly overlapped. Meanwhile in the colder brine pools, sulfatereducing Deltaproteobacteria were the most prominent bacterial groups inhabiting the interfaces. Corresponding to the bacterial community profile, the analysis of dsrA gene sequences revealed collectively high diversity of sulfate-reducing communities. Desulfatiglans-like dsrA was the prevalent group and conserved across the Red Sea brine pools. In addition to the molecular studies, more than thirty bacterial strains were successfully isolated and remarkably were found to be cytotoxic against the cancer cell lines. However, none of them were sulfate reducers. Thus, a single-cell genomic analysis was used to study

  10. Deep water dissolution in Marine Isotope Stage 3 from the northern South China Sea

    Science.gov (United States)

    Huang, B.

    2015-12-01

    The production, transport, deposition, and dissolution of carbonate profoundly implicate the global carbon cycle affect the inventory and distribution of dissolved organic carbon (DIC) and alkalinity (ALK), which drive atmospheric CO2 change on glacial-interglacial timescale. the process may provide significant clues for improved understanding of the mechanisms that control the global climate system. In this study, we calculate and analyze the foraminiferal dissolution index (FDX) and the fragmentation ratios of planktonic foraminifera over 60-25 ka based on samples from 17924 and ODP 1144 in the northeastern South China Sea (SCS) to reconstruct the deep water carbonate dissolution during Marine Isotope Stage 3 (MIS 3). Result shows that the dissolution of carbonate increases gradually at 17924 but keeps stable at ODP 1144. The changes of FDX coincidence with that of fragmentation ratios at 17924 and ODP 1144 suggest both indexes can be used as reliable dissolving proxies of planktonic foraminifera. Comparing FDX and fragmentation ratios at both sites, we find the FDX and fragmentation ratios at 17924 are higher than those at 1144, indicating that carbonate dissolution is intenser in 17924 core during MIS 3. The increasing total percentage of both N. dutertrei and G. bulloides during MIS 3 reveals the rising primary productivity that may lead to deep water [CO32-] decrease. The slow down of thermohaline circulation may increase deep water residence time and accelerate carbonate dissolution. In addition, the covering of ice caps, iron supply and increased surface-water stratification also contribute to atmosphere CO2 depletion and [CO32-] decrease in deep water. In the meanwhile, regression result from colder temperature increases the input of ALK and DIC to the deep ocean and deepens the carbonate saturation depth, which makes the deep water [CO32-] rise. In ODP Site 1144, the decrease in [CO32-] caused by more CO2 restored in deep water is equal to the increase in

  11. Hydrocarbons, PCBs and DDT in the NW Mediterranean deep-sea fish Mora moro

    Science.gov (United States)

    Solé, Montserrat; Porte, Cinta; Albaigés, Joan

    2001-02-01

    Data on aliphatic and polycyclic aromatic hydrocarbons (PAHs), polychlorinated biphenyls (PCBs) and DDTs in the deep-sea fish Mora moro are reported in relation to the animal's weight/size and tissues (muscle, liver, digestive tube and gills). Fish samples were collected in the Gulf of Lions (NW Mediterranean) at an approximate depth of 1000 m. The concentrations of these organic pollutants followed the trend musclelipid content of the organs. No clear bioaccumulation dependence on fish weight/size was observed for gills, digestive tube and liver when the fat contents of these tissues were taken into account. However, the concentrations in muscle decreased with size, possibly implying a simple dilution effect by the increase of body weight. Hydrocarbons, and particularly PAHs, were strongly depleted in all tissues with respect to organochlorinated compounds if compared with the amounts present in bottom waters and sediment. Smaller specimens displayed for most pollutants qualitatively different patterns than larger fish, which could be attributed to their particular habitat/diet. The aliphatic hydrocarbon profiles suggested that Mora moro was exposed to a more predominant intake of biogenic rather than petrogenic hydrocarbons. The entrance and storage organs exhibited characteristic PAH and PCB distributions, reflecting different bioaccumulation and metabolic pathways. Compared with the profiles currently found in surface fish species, a relatively higher contribution of heavier components, namely hepta- and octochlorinated PCBs, and 4-6-ringed PAHs, was found in the deep-sea fish.

  12. Physiological compensation for environmental acidification is limited in the deep-sea urchin Strongylocentrotus fragilis

    Science.gov (United States)

    Taylor, J. R.; Lovera, C.; Whaling, P. J.; Buck, K. R.; Pane, E. F.; Barry, J. P.

    2013-05-01

    Anthropogenic CO2 is now reaching depths over 1000 m in the Eastern Pacific, overlapping the Oxygen Minimum Zone (OMZ). Deep-sea animals - particularly, calcifiers - are suspected to be especially sensitive to environmental acidification associated with global climate change. We have investigated the effects of hypercapnia and hypoxia on the deep-sea urchin Strongylocentrotus fragilis, during two long-term exposure experiments (1 month and 4 month) at three levels of reduced pH at in situ O2 levels of approx. 10% saturation, and also to control pH at 100% O2 saturation. During the first experiment, internal acid-base balance was investigated during a one-month exposure; results show S. fragilis has limited ability to compensate for the respiratory acidosis brought on by reduced pH, due in part to low non-bicarbonate extracellular fluid buffering capacity. During the second experiment, longer-term effects of hypercapnia and variable O2 on locomotion, feeding, growth, and gonadosomatic index (GSI) were investigated; results show significant mortality and correlation of all measured parameters with environmental acidification at pH 6.6. Transient adverse effects on locomotion and feeding were seen at pH 7.2, without compromise of growth or GSI. Based on the expected changes in ocean pH and oxygen, results suggest extinction of S. fragilis in the eastern North Pacific is unlikely. Rather, we expect a shoaling and contraction of its bathymetric range.

  13. Dispersal of volcaniclasts during deep-sea eruptions: Settling velocities and entrainment in buoyant seawater plumes

    Science.gov (United States)

    Barreyre, Thibaut; Soule, S. Adam; Sohn, Robert A.

    2011-08-01

    We use tank experiments to measure settling rates of deep-sea volcaniclastic material recovered from the Arctic (85°E Gakkel Ridge) and Pacific (Juan de Fuca Ridge, Loihi seamount) Oceans. We find that clast size and shape exert a strong influence on settling velocity, with velocities of ~ 30 cm/s for large (~ 8 mm), blocky clasts, compared to velocities of ~ 2.5 cm/s for small (Pele) entrained in a megaplume could be advected as far as a few kilometers from a source region. These results indicate that entrainment in buoyant seawater plumes during an eruption may play an important role in clast dispersal, but it is not clear if this mechanism can explain the distribution of volcaniclastic material at the sites on the Gakkel and Juan de Fuca Ridges where our samples were acquired. In order to understand the dispersal of volcaniclastic material in the deep-sea it will be necessary to rigorously characterize existing deposits, and develop models capable of incorporating explosive gas phases into the eruption plume.

  14. Supernova-produced radionuclides in deep-sea sediments measured with AMS

    International Nuclear Information System (INIS)

    Feige, J.

    2014-01-01

    This thesis is dedicated to computational micromagnetics, where several new numerical methods are In this work a set of long-lived radionuclides is measured to detect supernova-traces presumably deposited on Earth 2-3 Myr ago. Approximately 100 samples of four deep-sea sediment cores (Indian Ocean) were analyzed for 26 Al, 53Mn, and 60 Fe with accelerator mass spectrometry (AMS). Additionally, 10 Be was measured to confirm the existing paleomagnetic chronology of the sediments. A signal of extraterrestrial 60 Fe, which is not produced in-situ on Earth, was detected in a time period of 1.7-3.2 Myr in the sediments used for this work. 60 Fe/ 26 Al ratios were used to calculate limits on theoretical nucleosynthesis models. A supernova-signature of 26 Al is hidden behind a terrestrial background. The measured 26 Al/ 10 Be ratios indicate, that the major source of 26 Al detected in the sediments is of atmospheric origin. Because of the extraordinarily good depth profile for the deep-sea sediments from the measured 26 Al data, this radionuclide was used for dating. (author) [de

  15. A Simple and Efficient RNA Extraction Method from Deep-Sea Hydrothermal Vent Chimney Structures.

    Science.gov (United States)

    Muto, Hisashi; Takaki, Yoshihiro; Hirai, Miho; Mino, Sayaka; Sawayama, Shigeki; Takai, Ken; Nakagawa, Satoshi

    2017-12-27

    RNA-based microbiological analyses, e.g., transcriptome and reverse transcription-quantitative PCR, require a relatively large amount of high quality RNA. RNA-based analyses on microbial communities in deep-sea hydrothermal environments often encounter methodological difficulties with RNA extraction due to the presence of unique minerals in and the low biomass of samples. In the present study, we assessed RNA extraction methods for deep-sea vent chimneys that had complex mineral compositions. Mineral-RNA adsorption experiments were conducted using mock chimney minerals and Escherichia coli total RNA solution, and showed that detectable RNA significantly decreased possibly due to adsorption onto minerals. This decrease in RNA was prevented by the addition of sodium tripolyphosphate (STPP), deoxynucleotide triphosphates (dNTPs), salmon sperm DNA, and NaOH. The addition of STPP was also effective for RNA extraction from the mixture of E. coli cells and mock chimney minerals when TRIzol reagent and the RNeasy column were used, but not when the RNeasy PowerSoil total RNA kit was used. A combination of STPP, TRIzol reagent, the RNeasy column, and sonication resulted in the highest RNA yield from a natural chimney. This indirect extraction procedure is simple, rapid, inexpensive, and may be used for large-scale RNA extraction.

  16. Defying Dissolution: Discovery of Deep-Sea Scleractinian Coral Reefs in the North Pacific.

    Science.gov (United States)

    Baco, Amy R; Morgan, Nicole; Roark, E Brendan; Silva, Mauricio; Shamberger, Kathryn E F; Miller, Kelci

    2017-07-14

    Deep-sea scleractinian coral reefs are protected ecologically and biologically significant areas that support global fisheries. The absence of observations of deep-sea scleractinian reefs in the Central and Northeast Pacific, combined with the shallow aragonite saturation horizon (ASH) and high carbonate dissolution rates there, fueled the hypothesis that reef formation in the North Pacific was improbable. Despite this, we report the discovery of live scleractinian reefs on six seamounts of the Northwestern Hawaiian Islands and Emperor Seamount Chain at depths of 535-732 m and aragonite saturation state (Ω arag ) values of 0.71-1.33. Although the ASH becomes deeper moving northwest along the chains, the depth distribution of the reefs becomes shallower, suggesting the ASH is having little influence on their distribution. Higher chlorophyll moving to the northwest may partially explain the geographic distribution of the reefs. Principle Components Analysis suggests that currents are also an important factor in their distribution, but neither chlorophyll nor the available current data can explain the unexpected depth distribution. Further environmental data is needed to elucidate the reason for the distribution of these reefs. The discovery of reef-forming scleractinians in this region is of concern because a number of the sites occur on seamounts with active trawl fisheries.

  17. In situ radionuclide transfers in the deep-sea Lysianassidae amphipod Eurythenes gryllus

    International Nuclear Information System (INIS)

    Calmet, D.; Charmasson, S.

    1989-01-01

    Previous studies at the NEA dumpsite confirmed the existence of the scavenging amphipod Eurythenes gryllus. The aim of this study was to inquire if, under deep-sea conditions of low temperature and high pressure, this species of crustacean would retain artificial radionuclides in the same organ as those observed in similar coastal species of the same family. This necrophagous species is easily attracted by bait. It can ingest 30 to 60% of its body weight in 30 ± 10 min. In addition, this species can store ingested food for several weeks. Thus, the ingestion of radiolabelled food over a period of several days could be considered as a single-meal contamination experiment. For all these reasons Eurythenes gryllus appeared to be a good test animal to compare laboratory experiments on coastal species with in situ radionuclide retention studies on deep-sea fauna. In order to prevent any disturbance of their physiological conditions, a special device was used to attract and feed the animals with radiolabelled baits, in situ at a depth of 4000 m, rather than recovering amphipods without decompression and keeping them alive aboard ship. Qualitatively speaking results yielded by in situ experiments support those obtained from laboratory studies with coastal animals and the same radionuclides

  18. A green fluorescent protein with photoswitchable emission from the deep sea.

    Directory of Open Access Journals (Sweden)

    Alexander Vogt

    Full Text Available A colorful variety of fluorescent proteins (FPs from marine invertebrates are utilized as genetically encoded markers for live cell imaging. The increased demand for advanced imaging techniques drives a continuous search for FPs with new and improved properties. Many useful FPs have been isolated from species adapted to sun-flooded habitats such as tropical coral reefs. It has yet remained unknown if species expressing green fluorescent protein (GFP-like proteins also exist in the darkness of the deep sea. Using a submarine-based and -operated fluorescence detection system in the Gulf of Mexico, we discovered ceriantharians emitting bright green fluorescence in depths between 500 and 600 m and identified a GFP, named cerFP505, with bright fluorescence emission peaking at 505 nm. Spectroscopic studies showed that approximately 15% of the protein bulk feature reversible ON/OFF photoswitching that can be induced by alternating irradiation with blue und near-UV light. Despite being derived from an animal adapted to essentially complete darkness and low temperatures, cerFP505 maturation in living mammalian cells at 37 degrees C, its brightness and photostability are comparable to those of EGFP and cmFP512 from shallow water species. Therefore, our findings disclose the deep sea as a potential source of GFP-like molecular marker proteins.

  19. A simple model for the dispersion of radioactive wastes dumped on the deep-sea bed

    International Nuclear Information System (INIS)

    Shepherd, J.G.

    1976-01-01

    A simple model has been developed for the dispersion of radioactive materials in a closed and finite ocean. It allows for the simultaneous action of both diffusion and horizontal (but not vertical) advection, and thus avoids the major limitations of previous models. It is sufficiently versatile to handle non-Fickian diffusion and radioactive decay, but requires numerical integration using some semi-empirical form for the Green function of diffusion from a point source. The model has been used to estimate equilibrium concentrations of radioactive materials in sea water arising from the continuous release of material from a dump on the bottom of the deep ocean, using parameters appropriate for the North Atlantic. It is found that except under rather extreme conditions the surface concentrations do not exceed the long-term average value which would be established in a perfectly mixed ocean. The concentrations are also rather insensitive to the values of the diffusion and advection parameters used, except for that for vertical diffusion, but depend strongly on the overall removal rate of material from the ocean, including processes other than radioactive decay. It is suggested that safety assessments of deep-sea dumping should utilize estimates of the environmental capacities of the oceans based on the long-term 'well-mixed' average concentrations (which are very easily calculated) using a safety factor of no more than ten to allow for the possible effects of pluming and upwelling. (author)

  20. Late Holocene variations in Pacific surface circulation and biogeochemistry inferred from proteinaceous deep-sea corals

    Directory of Open Access Journals (Sweden)

    T. P. Guilderson

    2013-09-01

    Full Text Available δ15N and δ13C data obtained from samples of proteinaceous deep-sea corals collected from the North Pacific Subtropical Gyre (Hawaiian Archipelago and the central equatorial Pacific (Line Islands document multidecadal to century-scale variability in the isotopic composition of surface-produced particulate organic matter exported to the deep sea. Comparison of the δ13C data, where Line Islands samples are 0.6‰ more positive than the Hawaiian samples, supports the contention that the North Pacific Subtropical Gyre is more efficient than the tropical upwelling system at trapping and/or recycling nutrients within the mixed layer. δ15N values from the Line Islands samples are also more positive than those from the central gyre, and within the Hawaiian samples there is a gradient with more positive δ15N values in samples from the main Hawaiian Islands versus the French Frigate Shoals in the Northwestern Hawaiian Islands. The gradient in the Hawaiian samples likely reflects the relative importance of algal acquisition of metabolic N via dissolved seawater nitrate uptake versus nitrogen fixation. The Hawaiian sample set also exhibits a strong decrease in δ15N values from the mid-Holocene to present. We hypothesize that this decrease is most likely the result of decreasing trade winds, and possibly a commensurate decrease in entrainment of more positive δ15N-NO3 subthermocline water masses.

  1. Compilation of selected deep-sea biological data for the US subseabed disposal project

    International Nuclear Information System (INIS)

    Gomez, L.S.; Marietta, M.G.; Jackson, D.W.

    1987-03-01

    The US Subseabed Disposal Project (SDP) has compiled an extensive deep-sea biological data base to be used in calculating biological parameters of state and rate included in mathematical models of oceanographic transport of radionuclides. The data base is organized around a model deep-sea ecosystem which includes the following components: zooplankton, fish and other nekton, invertebrate benthic megafauna, benthic macrofauna, benthic meiofauna, heterotrophic microbiota, as well as suspended and sediment particulate organic carbon. Measurements of abundance and activity rates (e.g., respiration, production, sedimentation, etc.) reported in the international oceanographic literature are summarized in 23 tables. Included in these tables are the latitudinal position of the studies, as well as information describing sampling techniques and any special notes needed to better assess the data presented. This report has been prepared primarily as a resource document to be used in calculating parameter values for various modeling applications, and for preparing historical data reviews for other SDP reports. Depending on the intended use, these data will require further reduction and unit conversion

  2. The "island rule" and deep-sea gastropods: re-examining the evidence.

    Directory of Open Access Journals (Sweden)

    John J Welch

    2010-01-01

    Full Text Available One of the most intriguing patterns in mammalian biogeography is the "island rule", which states that colonising species have a tendency to converge in body size, with larger species evolving decreased sizes and smaller species increased sizes. It has recently been suggested that an analogous pattern holds for the colonisation of the deep-sea benthos by marine Gastropoda. In particular, a pioneering study showed that gastropods from the Western Atlantic showed the same graded trend from dwarfism to gigantism that is evident in island endemic mammals. However, subsequent to the publication of the gastropod study, the standard tests of the island rule have been shown to yield false positives at a very high rate, leaving the result open to doubt.The evolution of gastropod body size in the deep sea is reexamined. Using an extended and updated data set, and improved statistical methods, it is shown that some results of the previous study may have been artifactual, but that its central conclusion is robust. It is further shown that the effect is not restricted to a single gastropod clade, that its strength increases markedly with depth, but that it applies even in the mesopelagic zone.The replication of the island rule in a distant taxonomic group and a partially analogous ecological situation could help to uncover the causes of the patterns observed--which are currently much disputed. The gastropod pattern is evident at intermediate depths, and so cannot be attributed to the unique features of abyssal ecology.

  3. Design of self-contained sensor for monitoring of deep-sea offshore platform

    Science.gov (United States)

    Song, Yang; Yu, Yan; Zhang, Chunwei; Dong, Weijie; Ou, Jinping

    2013-04-01

    Offshore platform, which is the base of the production and living in the sea, is the most important infrastructure for developing oil and gas resources. At present, there are almost 6500 offshore platforms servicing in the 53 countries' sea areas around the world, creating great wealth for the world. In general, offshore platforms may work for 20 years, however, offshore platforms are expensive, complex, bulky, and so many of them are on extended active duty. Because of offshore platforms servicing in the harsh marine environment for a long time, the marine environment have a great impact on the offshore platforms. Besides, with the impact and erosion of seawater, and material aging, the offshore platform is possible to be in unexpected situations when a badly sudden situation happens. Therefore, it is of great significance to monitor the marine environment and offshore platforms. The self-contained sensor for deep-sea offshore platform with its unique design, can not only effectively extend the working time of the sensor with the capability of converting vibration energy to electrical energy, but also simultaneously collect the data of acceleration, inclination, temperature and humidity of the deep sea, so that we can achieve the purpose of monitoring offshore platforms through analyzing the collected data. The self-contained sensor for monitoring of deep-sea offshore platform includes sensing unit, data collecting and storage unit, the energy supply unit. The sensing unit with multi-variables, consists of an accelerometer LIS344ALH, an inclinometer SCA103T and a temperature and humidity sensor SHT11; the data collecting and storage unit includes the MSP430 low-power MCU, large capacity memory, clock circuit and the communication interface, the communication interface includes USB interface, serial ports and wireless interface; in addition, the energy supply unit, converting vibration to electrical energy to power the overall system, includes the electromagnetic

  4. Growth rate and age distribution of deep-sea black corals in the Gulf of Mexico

    Science.gov (United States)

    Prouty, N.G.; Roark, E.B.; Buster, N.A.; Ross, Steve W.

    2011-01-01

    Black corals (order Antipatharia) are important long-lived, habitat-forming, sessile, benthic suspension feeders that are found in all oceans and are usually found in water depths greater than 30 m. Deep-water black corals are some of the slowest-growing, longest-lived deep-sea corals known. Previous age dating of a limited number of black coral samples in the Gulf of Mexico focused on extrapolated ages and growth rates based on skeletal 210Pb dating. Our results greatly expand the age and growth rate data of black corals from the Gulf of Mexico. Radiocarbon analysis of the oldest Leiopathes sp. specimen from the upper De Soto Slope at 300 m water depth indicates that these animals have been growing continuously for at least the last 2 millennia, with growth rates ranging from 8 to 22 µm yr–1. Visual growth ring counts based on scanning electron microscopy images were in good agreement with the 14C-derived ages, suggestive of annual ring formation. The presence of bomb-derived 14C in the outermost samples confirms sinking particulate organic matter as the dominant carbon source and suggests a link between the deep-sea and surface ocean. There was a high degree of reproducibility found between multiple discs cut from the base of each specimen, as well as within duplicate subsamples. Robust 14C-derived chronologies and known surface ocean 14C reservoir age constraints in the Gulf of Mexico provided reliable calendar ages with future application to the development of proxy records.

  5. New and rare sponges from the deep shelf of the Alboran Island (Alboran Sea, Western Mediterranean).

    Science.gov (United States)

    Sitjà, Cèlia; Maldonado, Manuel

    2014-01-31

    The sponge fauna from the deep shelf (70 to 200 m) of the Alboran Island (Alboran Sea, Western Mediterranean) was investigated using a combination of ROV surveys and collecting devices in the frame of the EC LIFE+ INDEMARES Grant aimed to designate marine areas of the Nature 2000 Network within Spanish territorial waters. From ROV surveys and 351 examined specimens, a total of 87 sponge species were identified, most belonging in the Class Demospongiae, and one belonging in the Class Hexactinellida. Twenty six (29%) species can be regarded as either taxonomically or faunistically relevant. Three of them were new to science (Axinella alborana nov. sp.; Axinella spatula nov. sp.; Endectyon filiformis nov. sp.) and 4 others were Atlantic species recorded for the first time in the Mediterranean Sea (Jaspis eudermis Lévi & Vacelet, 1958; Hemiasterella elongata Topsent, 1928; Axinella vellerea Topsent, 1904; Gelliodes fayalensis Topsent, 1892). Another outstanding finding was a complete specimen of Rhabdobaris implicata Pulitzer-Finali, 1983, a species only known from its holotype, which had entirely been dissolved for its description. Our second record of the species has allowed a neotype designation and a restitution of the recently abolished genus Rhabdobaris Pulitzer-Finally, 1983, also forcing a slight modification of the diagnosis of the family Bubaridae. Additionally, 12 species were recorded for the first time from the shelf of the Alboran Island, including a few individuals of the large hexactinellid Asconema setubalense Kent, 1877 that provided the second Mediterranean record of this "North Atlantic" hexactinellid. ROV explorations also revealed that sponges are an important component of the deep-shelf benthos, particularly on rocky bottoms, where they make peculiar sponge gardens characterized by a wide diversity of small, erect species forming a dense "undergrowth" among a scatter of large sponges and gorgonians. The great abundance and the taxonomic

  6. Bioprospecting Deep-Sea Actinobacteria for Novel Anti-infective Natural Products

    Directory of Open Access Journals (Sweden)

    Dongbo Xu

    2018-04-01

    Full Text Available The global prevalence of drug resistance has created an urgent need for the discovery of novel anti-infective drugs. The major source of antibiotics in current clinical practice is terrestrial actinobacteria; the less-exploited deep-sea actinobacteria may serve as an unprecedented source of novel natural products. In this study, we evaluated 50 actinobacteria strains derived from diverse deep water sponges and environmental niches for their anti-microbial activities against a panel of pathogens including Candida albicans, Clostridium difficile, Staphylococcus aureus, and methicillin-resistant S. aureus (MRSA, and Pseudomonas aeruginosa. More than half of the tested strains (27 were identified as active in at least one assay. The rare earth salt lanthanum chloride (LaCl3 was shown to be as an effective elicitor. Among the 27 strains, the anti-microbial activity of 15 were induced or enhanced by the addition of LaCl3. This part of study focused on one strain R818, in which potent antifungal activity was induced by the addition of LaCl3. We found that the LaCl3-activated metabolites in R818 are likely antimycin-type compounds. One of them, compound 1, has been purified. Spectroscopic analyses including HR-MS and 1D NMR indicated that this compound is urauchimycin D. The antifungal activity of compound 1 was confirmed with a minimal inhibitory concentration (MIC of 25 μg/mL; the purified compound also showed a moderate activity against C. difficile. Additional notable strains are: strain N217 which showed both antifungal and antibacterial (including P. aeruginosa activities and strain M864 which showed potent activity against C. difficile with an MIC value (0.125 μg/mL lower than those of vancomycin and metronidazole. Our preliminary studies show that deep-sea actinobacteria is a promising source of anti-infective natural products.

  7. Sedimentary Markers : a window into deep geodynamic processes Examples from the Western Mediterranean Sea

    Science.gov (United States)

    Rabineau, Marina; Aslanian, Daniel; Leroux, Estelle; Pellen, Romain; Gorini, Christian; Moulin, Maryline; Droz, Laurence; Bache, Francois; Molliex, Stephane; Silenzario, Carmine; Rubino, Jean-Loup

    2017-04-01

    Deep Earth dynamics impact so strongly on surface geological processes that we can use sediment palaeo-markers as a window into the deeper Earth. Derived from climatic and tectonic erosive actions on the continents, and related to eustasy, subsidence and isostasy, the sediment in a deep basin is the main recorder of these processes. Nevertheless, defining and quantifying the relative roles of parameters that interact to give the final sedimentary architecture is not a simple task. Using a 3D-grid of seismic and wide-angle data, boreholes and numerical stratigraphic modelling, we propose here a quantification of post-rift vertical movements in the Provençal Basin (Western Mediterranean) involving three domains of subsidence: seaward tilting on the platform and the slope and purely vertical subsidence in the deep basin (Rabineau et al., 2014 ; Leroux et al., 2015). These domains fit the deeper crustal domains highlighted by previous geophysical data (Moulin et al., 2015 ; Afilhado et al., 2015). Post-break-up sedimentary markers may therefore be used to identify the initial hinge lines of the rifting phase, to quantify sedimentation rates and isostatic rebound (Rabineau et al., 2014) and redefine the subsidence laws. Similar work and results are obtained in the Valencia Basin (Pellen et al., 2016). This Western Mediterranean Sea is a natural laboratory with very high total subsidence rates that enable high sedimentation rates along the margin with sediments provided by the Rhône and Ebro rivers flowing from the Alps, the Pyrennees and Catalan chains, which in turn archives the detailed record of climate/tectonic evolution during the Neogene. The Western Mediterranean Sea could therefore further probe deep-earth and surface connections using deep drillings of this land-locked ocean basin transformed into a giant saline basin (Rabineau et al., 2015). Leroux, E., Aslanian, D., Rabineau, M., M. Moulin, D. Granjeon, C. Gorini, L. Droz, 2015. Sedimentary markers: a

  8. Deep-Water Acoustic Anomalies from Methane Hydrate in the Bering Sea

    Science.gov (United States)

    Wood, Warren T.; Barth, Ginger A.; Scholl, David W.; Lebedeva-Ivanova, Nina

    2015-01-01

    A recent expedition to the central Bering Sea, one of the most remote locations in the world, has yielded observations confirming gas and gas hydrates in this deep ocean basin. Significant sound speed anomalies found using inversion of pre-stack seismic data are observed in association with variable seismic amplitude anomalies in the thick sediment column. The anomalously low sound speeds below the inferred base of methane hydrate stability indicate the presence of potentially large quantities of gas-phase methane associated with each velocity-amplitude anomaly (VAMP). The data acquired are of such high quality that quantitative estimates of the concentrations of gas hydrates in the upper few hundred meters of sediment are also possible, and analyses are under way to make these estimates. Several VAMPs were specifically targeted in this survey; others were crossed incidentally. Indications of many dozens or hundreds of these features exist throughout the portion of the Bering Sea relevant to the U.S. extended continental shelf (ECS) consistent with the United Nations Convention on the Law of the Sea

  9. Active microbial community structure of deep subsurface sediments within Baltic Sea Basin

    Science.gov (United States)

    Reese, B. K.; Zinke, L.; Carvalho, G.; Lloyd, K. G.; Marshall, I.; Shumaker, A.; Amend, J.

    2014-12-01

    The Baltic Sea Basin (BSB) is a unique depositional setting that has experienced periods of glaciation and deglaciation as a result of climatic fluctuations over past tens of thousands of years. This has resulted in laminated sediments formed during periods with strong permanent salinity stratification. The high sedimentation rates make this an ideal setting to understand the microbial structure of a deep biosphere community in a relatively high carbon, and thus high-energy environment, compared to other deep subsurface sites. Samples were collected through scientific drilling during the International Ocean Discovery Program (IODP) Expedition 347 on board the Greatship Manisha, September-November 2013. We examined the active microbial community structure using the 16S rRNA gene transcript and active functional genes through metatranscriptome sequencing. Major biogeochemical shifts have been observed in response to the depositional history between the limnic, brackish, and marine phases. The active microbial community structure in the BSB is diverse and reflective of the unique changes in the geochemical profile. These data further refine our understanding of the existence life in the deep subsurface and the survival mechanisms required for this extreme environment.

  10. Scientific Considerations for the Assessment and Management of Mine Tailings Disposal in the Deep Sea

    Directory of Open Access Journals (Sweden)

    Lindsay L. Vare

    2018-02-01

    Full Text Available Deep-sea tailings disposal (DSTD and its shallow water counterpart, submarine tailings disposal (STD, are practiced in many areas of the world, whereby mining industries discharge processed mud- and rock-waste slurries (tailings directly into the marine environment. Pipeline discharges and other land-based sources of marine pollution fall beyond the regulatory scope of the London Convention and the London Protocols (LC/LP. However, guidelines have been developed in Papua New Guinea (PNG to improve tailings waste management frameworks in which mining companies can operate. DSTD can impact ocean ecosystems in addition to other sources of stress, such as from fishing, pollution, energy extraction, tourism, eutrophication, climate change and, potentially in the future, from deep-seabed mining. Environmental management of DSTD may be most effective when placed in a broader context, drawing expertise, data and lessons from multiple sectors (academia, government, society, industry, and regulators and engaging with international deep-ocean observing programs, databases and stewardship consortia. Here, the challenges associated with DSTD are identified, along with possible solutions, based on the results of a number of robust scientific studies. Also highlighted are the key issues, trends of improved practice and techniques that could be used if considering DSTD (such as increased precaution if considering submarine canyon locations, likely cumulative impacts, and research needed to address current knowledge gaps.

  11. Biogeography and ecology of the rare and abundant microbial lineages in deep-sea hydrothermal vents.

    Science.gov (United States)

    Anderson, Rika E; Sogin, Mitchell L; Baross, John A

    2015-01-01

    Environmental gradients generate countless ecological niches in deep-sea hydrothermal vent systems, which foster diverse microbial communities. The majority of distinct microbial lineages in these communities occur in very low abundance. However, the ecological role and distribution of rare and abundant lineages, particularly in deep, hot subsurface environments, remain unclear. Here, we use 16S rRNA tag sequencing to describe biogeographic patterning and microbial community structure of both rare and abundant archaea and bacteria in hydrothermal vent systems. We show that while rare archaeal lineages and almost all bacterial lineages displayed geographically restricted community structuring patterns, the abundant lineages of archaeal communities displayed a much more cosmopolitan distribution. Finally, analysis of one high-volume, high-temperature fluid sample representative of the deep hot biosphere described a unique microbial community that differed from microbial populations in diffuse flow fluid or sulfide samples, yet the rare thermophilic archaeal groups showed similarities to those that occur in sulfides. These results suggest that while most archaeal and bacterial lineages in vents are rare and display a highly regional distribution, a small percentage of lineages, particularly within the archaeal domain, are successful at widespread dispersal and colonization. © FEMS 2014. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  12. Response of deep-sea benthic foraminifera to Miocene paleoclimatic events, DSDP site 289

    International Nuclear Information System (INIS)

    Woodruff, F.; Douglas, R.G.

    1981-01-01

    Changes in the Miocene deep-sea benthic foraminifera at DSDP Site 289 closely correlate to the climatically induced variations in deep and bottom waters in the Pacific Ocean. In early Miocene time, oxygen and carbon isotopes indicate that bottom waters were relatively warm and poorly oxygenated. Benthic foraminiferal assemblages are characterized by various species inherited from the Oligocene. Expansion of the Antarctic icecap in the early middle Miocene, 14-16 m.y. ago, increased oxygen isotope values, produced cold, more oxygenated bottom waters and lead to a turnover in the benthic foraminifera. An Oligocene-early Miocene assemblage was replaced by a cibicidoid-dominated assemblage. Some species became extinct and benthic faunas became more bathymetrically restricted with the increased stratification of deep waters in the ocean. In mid-Miocene time, Epistominella exigua and E. umbonifera, indicative of young, oxygenated bottom waters, are relatively common at DSDP Site 289. Further glacial expansion 5-9 m.y. ago lowered sealevel, increased oceanic upwelling and associated biological productivity and intensified the oxygen minima. Abundant hispid and costate uvigerines become a dominant faunal element at shallow depths above 2500 m as E. umbonifera becomes common to abundant below 2500 m. By late Miocene time, benthic faunas similar in species composition and proportion to modern faunas on the Ontong-Java plateau, had become established. (Auth.)

  13. Unveiling the Biodiversity of Deep-Sea Nematodes through Metabarcoding: Are We Ready to Bypass the Classical Taxonomy?

    Science.gov (United States)

    Dell'Anno, Antonio; Carugati, Laura; Corinaldesi, Cinzia; Riccioni, Giulia; Danovaro, Roberto

    2015-01-01

    Nematodes inhabiting benthic deep-sea ecosystems account for >90% of the total metazoan abundances and they have been hypothesised to be hyper-diverse, but their biodiversity is still largely unknown. Metabarcoding could facilitate the census of biodiversity, especially for those tiny metazoans for which morphological identification is difficult. We compared, for the first time, different DNA extraction procedures based on the use of two commercial kits and a previously published laboratory protocol and tested their suitability for sequencing analyses of 18S rDNA of marine nematodes. We also investigated the reliability of Roche 454 sequencing analyses for assessing the biodiversity of deep-sea nematode assemblages previously morphologically identified. Finally, intra-genomic variation in 18S rRNA gene repeats was investigated by Illumina MiSeq in different deep-sea nematode morphospecies to assess the influence of polymorphisms on nematode biodiversity estimates. Our results indicate that the two commercial kits should be preferred for the molecular analysis of biodiversity of deep-sea nematodes since they consistently provide amplifiable DNA suitable for sequencing. We report that the morphological identification of deep-sea nematodes matches the results obtained by metabarcoding analysis only at the order-family level and that a large portion of Operational Clustered Taxonomic Units (OCTUs) was not assigned. We also show that independently from the cut-off criteria and bioinformatic pipelines used, the number of OCTUs largely exceeds the number of individuals and that 18S rRNA gene of different morpho-species of nematodes displayed intra-genomic polymorphisms. Our results indicate that metabarcoding is an important tool to explore the diversity of deep-sea nematodes, but still fails in identifying most of the species due to limited number of sequences deposited in the public databases, and in providing quantitative data on the species encountered. These aspects

  14. Palynofacies reveal fresh terrestrial organic matter inputs in the terminal lobes of the Congo deep-sea fan

    Science.gov (United States)

    Schnyder, Johann; Stetten, Elsa; Baudin, François; Pruski, Audrey M.; Martinez, Philippe

    2017-08-01

    The Congo deep-sea fan is directly connected to the Congo River by a unique submarine canyon. The Congo River delivers up to 2×1012gPOC/yr, a part of which is funnelled by the submarine canyon and feeds the deep-sea environments. The more distal part of the Congo deep-sea fan, the terminal lobe area, has a surface of 2500 km2 and is situated up to 800 km offshore at depths of 4750-5000 m. It is a remarkable place to study the fate and distribution of the organic matter transferred from the continent to the deep ocean via turbidity currents. Forty-two samples were analyzed from the terminal lobes, including sites from the active channel, one of its levees and an abandoned distal channel. Samples were collected using multitube cores and push-cores using a Victor 6000 ROV, which surveyed the dense chemosynthetic habitats that locally characterize the terminal lobes. Palynofacies reveal a remarkably well-preserved, dominantly terrestrial particulate organic matter assemblage, that has been transferred from the continent into the deep-sea by turbidity currents. Delicate plant structures, cuticle fragments and plant cellular material is often preserved, highlighting the efficiency of turbidity currents to transfer terrestrial organic matter to the sea-floor, where it is preserved. Moreover, the palynofacies data reveal a general sorting by density or buoyancy of the organic particles, as the turbulent currents escaped the active channel, feeding the levees and the more distal, abandoned channel area. Finally, in addition to aforementioned hydrodynamic factors controlling the organic matter accumulation, a secondary influence of chemosynthetic habitats on organic matter preservation is also apparent. Palynofacies is therefore a useful tool to record the distribution of organic matter in recent and ancient deep-sea fan environments, an important topic for both academic and petroleum studies.

  15. Fate of terrigenous organic matter across the Laptev Sea from the mouth of the Lena River to the deep sea of the Arctic interior

    NARCIS (Netherlands)

    Bröder, Lisa; Tesi, Tommaso; Salvadó, Joan A.; Semiletov, Igor P.; Dudarev, Oleg V.; Gustafsson, Orjan

    2016-01-01

    Ongoing global warming in high latitudes may cause an increasing supply of permafrost-derived organic carbon through both river discharge and coastal erosion to the Arctic shelves. Mobilized permafrost carbon can be either buried in sediments, transported to the deep sea or degraded to CO2 and

  16. Potential contribution of surface-dwelling Sargassum algae to deep-sea ecosystems in the southern North Atlantic

    Science.gov (United States)

    Baker, Philip; Minzlaff, Ulrike; Schoenle, Alexandra; Schwabe, Enrico; Hohlfeld, Manon; Jeuck, Alexandra; Brenke, Nils; Prausse, Dennis; Rothenbeck, Marcel; Brix, Saskia; Frutos, Inmaculada; Jörger, Katharina M.; Neusser, Timea P.; Koppelmann, Rolf; Devey, Colin; Brandt, Angelika; Arndt, Hartmut

    2018-02-01

    Deep-sea ecosystems, limited by their inability to use primary production as a source of carbon, rely on other sources to maintain life. Sedimentation of organic carbon into the deep sea has been previously studied, however, the high biomass of sedimented Sargassum algae discovered during the VEMA Transit expedition in 2014/2015 to the southern North Atlantic, and its potential as a regular carbon input, has been an underestimated phenomenon. To determine the potential for this carbon flux, a literature survey of previous studies that estimated the abundance of surface water Sargassum was conducted. We compared these estimates with quantitative analyses of sedimented Sargassum appearing on photos taken with an autonomous underwater vehicle (AUV) directly above the abyssal sediment during the expedition. Organismal communities associated to Sargassum fluitans from surface waters were investigated and Sargassum samples collected from surface waters and the deep sea were biochemically analyzed (fatty acids, stable isotopes, C:N ratios) to determine degradation potential and the trophic significance within deep-sea communities. The estimated Sargassum biomass (fresh weight) in the deep sea (0.07-3.75 g/m2) was several times higher than that estimated from surface waters in the North Atlantic (0.024-0.84 g/m2). Biochemical analysis showed degradation of Sargassum occurring during sedimentation or in the deep sea, however, fatty acid and stable isotope analysis did not indicate direct trophic interactions between the algae and benthic organisms. Thus, it is assumed that components of the deep-sea microbial food web form an important link between the macroalgae and larger benthic organisms. Evaluation of the epifauna showed a diverse nano- micro-, meio, and macrofauna on surface Sargassum and maybe transported across the Atlantic, but we had no evidence for a vertical exchange of fauna components. The large-scale sedimentation of Sargassum forms an important trophic link

  17. Microbial community composition of deep-sea corals from the Red Sea provides insight into functional adaption to a unique environment.

    Science.gov (United States)

    Röthig, Till; Yum, Lauren K; Kremb, Stephan G; Roik, Anna; Voolstra, Christian R

    2017-03-17

    Microbes associated with deep-sea corals remain poorly studied. The lack of symbiotic algae suggests that associated microbes may play a fundamental role in maintaining a viable coral host via acquisition and recycling of nutrients. Here we employed 16 S rRNA gene sequencing to study bacterial communities of three deep-sea scleractinian corals from the Red Sea, Dendrophyllia sp., Eguchipsammia fistula, and Rhizotrochus typus. We found diverse, species-specific microbiomes, distinct from the surrounding seawater. Microbiomes were comprised of few abundant bacteria, which constituted the majority of sequences (up to 58% depending on the coral species). In addition, we found a high diversity of rare bacteria (taxa at 90% of all bacteria). Interestingly, we identified anaerobic bacteria, potentially providing metabolic functions at low oxygen conditions, as well as bacteria harboring the potential to degrade crude oil components. Considering the presence of oil and gas fields in the Red Sea, these bacteria may unlock this carbon source for the coral host. In conclusion, the prevailing environmental conditions of the deep Red Sea (>20 °C, <2 mg oxygen L -1 ) may require distinct functional adaptations, and our data suggest that bacterial communities may contribute to coral functioning in this challenging environment.

  18. Species distribution models of two critically endangered deep-sea octocorals reveal fishing impacts on vulnerable marine ecosystems in central Mediterranean Sea.

    Science.gov (United States)

    Lauria, V; Garofalo, G; Fiorentino, F; Massi, D; Milisenda, G; Piraino, S; Russo, T; Gristina, M

    2017-08-14

    Deep-sea coral assemblages are key components of marine ecosystems that generate habitats for fish and invertebrate communities and act as marine biodiversity hot spots. Because of their life history traits, deep-sea corals are highly vulnerable to human impacts such as fishing. They are an indicator of vulnerable marine ecosystems (VMEs), therefore their conservation is essential to preserve marine biodiversity. In the Mediterranean Sea deep-sea coral habitats are associated with commercially important crustaceans, consequently their abundance has dramatically declined due to the effects of trawling. Marine spatial planning is required to ensure that the conservation of these habitats is achieved. Species distribution models were used to investigate the distribution of two critically endangered octocorals (Funiculina quadrangularis and Isidella elongata) in the central Mediterranean as a function of environmental and fisheries variables. Results show that both species exhibit species-specific habitat preferences and spatial patterns in response to environmental variables, but the impact of trawling on their distribution differed. In particular F. quadrangularis can overlap with fishing activities, whereas I. elongata occurs exclusively where fishing is low or absent. This study represents the first attempt to identify key areas for the protection of soft and compact mud VMEs in the central Mediterranean Sea.

  19. Microbial community composition of deep-sea corals from the Red Sea provides insight into functional adaption to a unique environment

    KAUST Repository

    Röthig, Till

    2017-03-17

    Microbes associated with deep-sea corals remain poorly studied. The lack of symbiotic algae suggests that associated microbes may play a fundamental role in maintaining a viable coral host via acquisition and recycling of nutrients. Here we employed 16 S rRNA gene sequencing to study bacterial communities of three deep-sea scleractinian corals from the Red Sea, Dendrophyllia sp., Eguchipsammia fistula, and Rhizotrochus typus. We found diverse, species-specific microbiomes, distinct from the surrounding seawater. Microbiomes were comprised of few abundant bacteria, which constituted the majority of sequences (up to 58% depending on the coral species). In addition, we found a high diversity of rare bacteria (taxa at <1% abundance comprised >90% of all bacteria). Interestingly, we identified anaerobic bacteria, potentially providing metabolic functions at low oxygen conditions, as well as bacteria harboring the potential to degrade crude oil components. Considering the presence of oil and gas fields in the Red Sea, these bacteria may unlock this carbon source for the coral host. In conclusion, the prevailing environmental conditions of the deep Red Sea (>20 °C, <2 mg oxygen L−1) may require distinct functional adaptations, and our data suggest that bacterial communities may contribute to coral functioning in this challenging environment.

  20. Metagenomic Analysis of Genes Encoding Nutrient Cycling Pathways in the Microbiota of Deep-Sea and Shallow-Water Sponges.

    Science.gov (United States)

    Li, Zhiyong; Wang, Yuezhu; Li, Jinlong; Liu, Fang; He, Liming; He, Ying; Wang, Shenyue

    2016-12-01

    Sponges host complex symbiotic communities, but to date, the whole picture of the metabolic potential of sponge microbiota remains unclear, particularly the difference between the shallow-water and deep-sea sponge holobionts. In this study, two completely different sponges, shallow-water sponge Theonella swinhoei from the South China Sea and deep-sea sponge Neamphius huxleyi from the Indian Ocean, were selected to compare their whole symbiotic communities and metabolic potential, particularly in element transformation. Phylogenetically diverse bacteria, archaea, fungi, and algae were detected in both shallow-water sponge T. swinhoei and deep-sea sponge N. huxleyi, and different microbial community structures were indicated between these two sponges. Metagenome-based gene abundance analysis indicated that, though the two sponge microbiota have similar core functions, they showed different potential strategies in detailed metabolic processes, e.g., in the transformation and utilization of carbon, nitrogen, phosphorus, and sulfur by corresponding microbial symbionts. This study provides insight into the putative metabolic potentials of the microbiota associated with the shallow-water and deep-sea sponges at the whole community level, extending our knowledge of the sponge microbiota's functions, the association of sponge- microbes, as well as the adaption of sponge microbiota to the marine environment.

  1. Constraints on sea level during the Pliocene: Records from the deep Pacific Ocean

    Science.gov (United States)

    Woodard, S. C.; Rosenthal, Y.; Miller, K. G.; Wright, J. D.; Chiu, B. K.

    2013-12-01

    To reconstruct sea level during the transition from peak late Pliocene warmth (~3.15 Ma) to the onset of N. Hemisphere glaciation (~2.75 Ma), we generated high resolution stable isotope (δ18O, δ13C) and trace metal (Mg/Ca) records using benthic foraminifera, Uvigerina sp., from northwest Pacific ODP Site 1208 (3350 m water depth). During the peak late Pliocene warmth Mg/Ca-derived temperature records indicate deep Pacific interglacial temperatures were not significantly warmer (+0.6 ×0.8°C) than modern and glacial temperatures were near freezing similar to the LGM. In contrast, the deep N. Atlantic (Site 607) was apparently ~3°C warmer than the modern during both Pliocene glacial and interglacial periods (Sosdian and Rosenthal, 2009), based on the Mg/Ca of P. wuellerstorfi, which may be influenced by carbonate ion effect (Elderfield et al., 2009 and refs therein). δ18O records indicate a significant long-term increase in benthic δ18O in both the N. Atlantic and N. Pacific, although the rate of increase (Δδ18O) in the N. Atlantic is approximately 3x that of the N. Pacific (Site 1208), based on least squares regressions of all glacial-interglacial data. The discrepancy in the Δδ18O between the two basins is explained by Mg/Ca-derived temperature records. Results from Site 1208 show that the deep Pacific experienced no long-term cooling over the period 3.15-2.7 Ma when the deep N. Atlantic cooled by ~2.5°C on average. The relatively stable Pacific deep-water record provides the more reliable reconstructions of sea-level changes. From 3.15-2.7 Ma, Pacific δ18O data records an average increase of ~0.19× 0.08 per mil implying a sea level drop of 19 m × 8 m. After correcting the N. Atlantic record for temperature, we find the long term δ18O change from 3.15-2.7 Ma is ~0.23×0.1 per mil which equates to a peak of 23 m × 10 m. Our estimates are further corroborated by foraminiferal calcite δ18O recorded during Pliocene peak interglacials KM3 and G17. The

  2. The Deepwater Horizon Oil Spill: Ecogenomics of the Deep-Sea Plume

    Science.gov (United States)

    Hazen, T. C.

    2012-12-01

    The explosion on April 20, 2010 at the BP-leased Deepwater Horizon drilling rig in the Gulf of Mexico off the coast of Louisiana, resulted in oil and gas rising to the surface and the oil coming ashore in many parts of the Gulf, it also resulted in the dispersment of an immense oil plume 4,000 feet below the surface of the water. Despite spanning more than 600 feet in the water column and extending more than 10 miles from the wellhead, the dispersed oil plume was gone within weeks after the wellhead was capped - degraded and diluted to undetectable levels. Furthermore, this degradation took place without significant oxygen depletion. Ecogenomics enabled discovery of new and unclassified species of oil-eating bacteria that apparently lives in the deep Gulf where oil seeps are common. Using 16s microarrays, functional gene arrays, clone libraries, lipid analysis and a variety of hydrocarbon and micronutrient analyses we were able to characterize the oil degraders. Metagenomic sequence data was obtained for the deep-water samples using the Illumina platform. In addition, single cells were sorted and sequenced for the some of the most dominant bacteria that were represented in the oil plume; namely uncultivated representatives of Colwellia and Oceanospirillum. In addition, we performed laboratory microcosm experiments using uncontaminated water collected from The Gulf at the depth of the oil plume to which we added oil and COREXIT. These samples were characterized by 454 pyrotag. The results provide information about the key players and processes involved in degradation of oil, with and without COREXIT, in different impacted environments in The Gulf of Mexico. We are also extending these studies to explore dozens of deep sediment samples that were also collected after the oil spill around the wellhead. This data suggests that a great potential for intrinsic bioremediation of oil plumes exists in the deep-sea and other environs in the Gulf of Mexico.

  3. Do larval supply and recruitment vary among chemosynthetic environments of the deep sea?

    Directory of Open Access Journals (Sweden)

    Anna Metaxas

    Full Text Available BACKGROUND: The biological communities that inhabit chemosynthetic environments exist in an ephemeral and patchily distributed habitat with unique physicochemical properties that lead to high endemicity. Consequently, the maintenance and recovery from perturbation of the populations in these habitats is, arguably, mainly regulated by larval supply and recruitment. METHODOLOGY/PRINCIPAL FINDINGS: WE USE DATA FROM THE PUBLISHED SCIENTIFIC LITERATURE TO: (1 compare the magnitudes of and variability in larval supply and settlement and recruitment at hydrothermal vents, seeps, and whale, wood and kelp falls; (2 explore factors that affect these life history processes, when information is available; and (3 explore taxonomic affinities in the recruit assemblages of the different chemosynthetic habitats, using multivariate statistical techniques. Larval supply at vents can vary across segments by several orders of magnitude for gastropods; for bivalves, supply is similar at vents on different segments, and at cold seeps. The limited information on larval development suggests that dispersal potential may be highest for molluscs from cold seeps, intermediate for siboglinids at vents and lowest for the whale-bone siboglinid Osedax. Settlement is poorly studied and only at vents and seeps, but tends to be highest near an active source of emanating fluid in both habitats. Rate of recruitment at vents is more variable among studies within a segment than among segments. Across different chemosynthetic habitats, recruitment rate of bivalves is much more variable than that of gastropods and polychaetes. Total recruitment rate ranges only between 0.1 and 1 ind dm(-2 d(-1 across all chemosynthetic habitats, falling above rates in the non-reducing deep sea. The recruit assemblages at vents, seeps and kelp falls have lower taxonomic breadth, and include more families and genera that have many species more closely related to each other than those at whale and wood

  4. Late Miocene climate and time scale reconciliation: Accurate orbital calibration from a deep-sea perspective

    Science.gov (United States)

    Drury, Anna Joy; Westerhold, Thomas; Frederichs, Thomas; Tian, Jun; Wilkens, Roy; Channell, James E. T.; Evans, Helen; John, Cédric M.; Lyle, Mitch; Röhl, Ursula

    2017-10-01

    Accurate age control of the late Tortonian to early Messinian (8.3-6.0 Ma) is essential to ascertain the origin of benthic foraminiferal δ18O trends and the late Miocene carbon isotope shift (LMCIS), and to examine temporal relationships between the deep-sea, terrasphere and cryosphere. The current Tortonian-Messinian Geological Time Scale (GTS2012) is based on astronomically calibrated Mediterranean sections; however, no comparable non-Mediterranean stratigraphies exist for 8-6 Ma suitable for testing the GTS2012. Here, we present the first high-resolution, astronomically tuned benthic stable isotope stratigraphy (1.5 kyr resolution) and magnetostratigraphy from a single deep-sea location (IODP Site U1337, equatorial Pacific Ocean), which provides unprecedented insight into climate evolution from 8.3-6.0 Ma. The astronomically calibrated magnetostratigraphy provides robust ages, which differ by 2-50 kyr relative to the GTS2012 for polarity Chrons C3An.1n to C4r.1r, and eliminates the exceptionally high South Atlantic spreading rates based on the GTS2012 during Chron C3Bn. We show that the LMCIS was globally synchronous within 2 kyr, and provide astronomically calibrated ages anchored to the GPTS for its onset (7.537 Ma; 50% from base Chron C4n.1n) and termination (6.727 Ma; 11% from base Chron C3An.2n), confirming that the terrestrial C3:C4 shift could not have driven the LMCIS. The benthic records show that the transition into the 41-kyr world, when obliquity strongly influenced climate variability, already occurred at 7.7 Ma and further strengthened at 6.4 Ma. Previously unseen, distinctive, asymmetric saw-tooth patterns in benthic δ18O imply that high-latitude forcing played an important role in late Miocene climate dynamics from 7.7-6.9 Ma. This new integrated deep-sea stratigraphy from Site U1337 can act as a new stable isotope and magnetic polarity reference section for the 8.3-6.0 Ma interval.

  5. Organic matter assimilation and selective feeding by holothurians in the deep sea: some observations and comments

    Science.gov (United States)

    Ginger, Michael L.; Billett, David S. M.; Mackenzie, Karen L.; Konstandinos Kiriakoulakis; Neto, Renato R.; K. Boardman, Daniel; Santos, Vera L. C. S.; Horsfall, Ian M.; A. Wolff, George

    The selective feeding behaviour and assimilation efficiencies of deep-sea holothurians were investigated in order to assess their impact on carbon and nitrogen remineralisation on the Porcupine Abyssal Plain (PAP; ˜ 49°N 16°W, ˜ 4850 m water depth). Unfortunately, reliable determination of organic matter in the gut contents of the organisms proved to be difficult, because of the lysis of cells associated with the death of the animals on recovery. This was expressed in high levels of free fatty acids in the gut contents of Oneirophanta mutabilis, which we ascribe to unregulated lipolysis of phospholipids and triacylglycerides. It was not possible to estimate accurately the contribution that such material made to the gut contents, but based on the distributions of sterols in the gut sediments, it is likely to have been substantial. Therefore, all assimilation efficiencies calculated for holothurians in the deep sea should be treated with caution. Fortuitously, a bloom of holothurians that feed on the sediment surface (namely Amperima rosea and Ellipinion molle) during the period of study provided an opportunity indirectly to assess the impact of megafauna on organic matter cycling at the PAP. Observations suggest that the depletion of phytosterols from the surficial sediments between July and October 1997 resulted from the selective uptake of fresh phytodetritus by the blooming species. Deep-sea holothurians do not biosynthesise sterols de novo and an estimate of the sterol required by the increased population of A. rosea and E. molle is equivalent to the sterol flux to the seafloor during the spring/summer of 1997. The implications are dramatic. Firstly, these and other megafauna apparently turned over and selectively removed phytosterols from the freshly arrived phytodetritus and the surficial sediment (0-5 mm) at the PAP in less than four months. Secondly, their action impacted the food resource available to other organisms. Finally, as phytosterols are

  6. The Last Interglacial in the Levant: Perspective from the ICDP Dead Sea Deep Drill Core

    Science.gov (United States)

    Goldstein, S. L.; Torfstein, A.; Stein, M.; Kushnir, Y.; Enzel, Y.; Haug, G. H.

    2014-12-01

    Sediments recovered by the ICDP Dead Sea Deep Drilling Project provide a new perspective on the climate history of the Levant during the last interglacial period MIS5. They record the extreme impacts of an intense interglacial characterized by stronger insolation, warmer mean global temperatures, and higher sea-levels than the Holocene. Results show both extreme hyper-aridity during MIS5e, including an unprecedented drawdown of Dead Sea water levels, and the impacts of a strong precession-driven African monsoon responsible for a major sapropel event (S5) in the eastern Mediterranean. Hyper-arid conditions at the beginning of MIS5e prior to S5 (~132-128 ka) are evidenced by halite deposition, indicating declining Dead Sea lake levels. Surprisingly, the hyper-arid phase is interrupted during the MIS5e peak (~128-120 ka), coinciding with the S5 sapropel, which is characterized by a thick (23 m) section of silty detritus (without any halite) whose provenance indicates southern-sourced wetness in the watershed. Upon weakening of the S5 monsoon (~120-115 ka), the return of extreme aridity resulted in an unprecedented lake level drawdown, reflected by massive salt deposition, and followed by a sediment hiatus (~115-100 ka) indicating prolonged low lake level. The resumption of section follows classic Levant patterns with more wetness during cooler MIS5b and hyper-aridity during warmer MIS5a. The ICDP core provides the first evidence for a direct linkage between an intense precession-driven African monsoon and wetness at the high subtropical latitude (~30N) of the Dead Sea watershed. Combined with coeval deposition of Negev speleothems and travertines, and calcitification of Red Sea corals, the evidence indicates a wet climatic corridor that could facilitate homo sapiens migration out of Africa during the MIS5e peak. In addition, the MIS 5e hyper-arid intervals may provide an important cautionary analogue for the impact of future warming on regional water resources.

  7. Meiobenthos and nematode assemblages from different deep-sea habitats of the Strait of Sicily (Central Mediterranean Sea

    Directory of Open Access Journals (Sweden)

    R. SANDULLI

    2015-05-01

    Full Text Available Much attention is currently devoted at upgrading our knowledge on biodiversity and functioning of deep water ecosystems. Information is constantly enriched by researchers, even from basins as the long-studied Mediterranean Sea. In such a perspective, we studied meiobenthic and nematode communities inhabiting muddy sediments from three different habitats at bathyal depths in the Strait of Sicily: a cold-water coral site (CS in the Maltese Coral Province, a muddy bottom in the same area (MS, and a hydrocarbon imprinted pockmark site (PS in the Gela Basin. The average meiofauna density at CS (1343 ind/10 cm2 and MS (1804 ind/10 cm2 is much higher than that reported in literature for similar habitats; it is also markedly more elevated than that recorded at PS (224 ind/10 cm2. Although nematodes of the three sites show different abundances, they share similar assemblage structure. Nematodes (avg. 86% and copepods (avg. 9.3% were the most abundant meiofaunal taxa at all sites followed by annelids, kinorhynchs and turbellarians. Nematodes were composed by 21 families and 46 genera, with Terschellingia, as most abundant genus (12.4%, followed by Microlaimus (11%, Daptonema (11%, Thalassomonhystera (10.8%, Acantholaimus (9.5% and Sabatieria (8.7%. The genera Thalassomonhystera, Terschellingia, Microlaimus, Daptonema, Chromadorita, Sabatieria, and Anticoma display a dominance in at least one station. The taxonomic structure of meiofaunal communities of the studied sites is rather similar but differences in relative abundance are evident.

  8. Circumpolar Deep Water transport and current structure at the Amundsen Sea shelf break

    Science.gov (United States)

    Assmann, Karen M.; Wåhlin, Anna K.; Heywood, Karen J.; Jenkins, Adrian; Kim, Tae Wan; Lee, Sang Hoon

    2017-04-01

    The West Antarctic Ice Sheet has been losing mass at an increasing rate over the past decades. Ocean heat transport to the ice-ocean interface has been identified as an important contributor to this mass loss and the role it plays in ice sheet stability makes it crucial to understand its drivers in order to make accurate future projections of global sea level. While processes closer to the ice-ocean interface modulate this heat transport, its ultimate source is located in the deep basin off the continental shelf as a core of relatively warm, salty water underlying a colder, fresher shallow surface layer. To reach the marine terminating glaciers and the base of floating ice shelves, this warm, salty water mass must cross the bathymetric obstacle of the shelf break. Glacial troughs that intersect the Amundsen shelf break and deepen southwards towards the ice shelf fronts have been shown to play an important role in transporting warm, salty Circumpolar Deep Water (CDW) towards the ice shelves. North of the shelf break, circulation in the Amundsen Sea occupies an intermediate regime between the eastward Antarctic Circumpolar Current that impinges on the shelf break in the Bellingshausen Sea and the westward southern limb of the Ross Gyre that follows the shelf break in the Ross Sea. Hydrographic and mooring observations and numerical model results at the mouth of the central shelf break trough leading to Pine Island and Thwaites Glaciers show a westward wind-driven shelf break current overlying an eastward undercurrent that turns onto the shelf in the trough. It is thought that the existence of the latter feature facilitates the on-shelf transport of CDW. A less clearly defined shelf break depression further west acts as the main pathway for CDW to Dotson and eastern Getz Ice shelves. Model results indicate that a similar eastward undercurrent exists here driving the on-shelf transport of CDW. Two moorings on the upper slope east of the trough entrance show a

  9. Temporal and Spatial Variations of Bacterial and Faunal Communities Associated with Deep-Sea Wood Falls

    Science.gov (United States)

    Bienhold, Christina; Wenzhöfer, Frank; Rossel, Pamela E.; Boetius, Antje

    2017-01-01

    Sinking of large organic food falls i.e. kelp, wood and whale carcasses to the oligotrophic deep-sea floor promotes the establishment of locally highly productive and diverse ecosystems, often with specifically adapted benthic communities. However, the fragmented spatial distribution and small area poses challenges for the dispersal of their microbial and faunal communities. Our study focused on the temporal dynamics and spatial distributions of sunken wood bacterial communities, which were deployed in the vicinity of different cold seeps in the Eastern Mediterranean and the Norwegian deep-seas. By combining fingerprinting of bacterial communities by ARISA and 454 sequencing with in situ and ex situ biogeochemical measurements, we show that sunken wood logs have a locally confined long-term impact (> 3y) on the sediment geochemistry and community structure. We confirm previous hypotheses of different successional stages in wood degradation including a sulphophilic one, attracting chemosynthetic fauna from nearby seep systems. Wood experiments deployed at similar water depths (1100–1700 m), but in hydrographically different oceanic regions harbored different wood-boring bivalves, opportunistic faunal communities, and chemosynthetic species. Similarly, bacterial communities on sunken wood logs were more similar within one geographic region than between different seas. Diverse sulphate-reducing bacteria of the Deltaproteobacteria, the sulphide-oxidizing bacteria Sulfurovum as well as members of the Acidimicrobiia and Bacteroidia dominated the wood falls in the Eastern Mediterranean, while Alphaproteobacteria and Flavobacteriia colonized the Norwegian Sea wood logs. Fauna and bacterial wood-associated communities changed between 1 to 3 years of immersion, with sulphate-reducers and sulphide-oxidizers increasing in proportion, and putative cellulose degraders decreasing with time. Only 6% of all bacterial genera, comprising the core community, were found at any time

  10. Temporal and Spatial Variations of Bacterial and Faunal Communities Associated with Deep-Sea Wood Falls.

    Directory of Open Access Journals (Sweden)

    Petra Pop Ristova

    Full Text Available Sinking of large organic food falls i.e. kelp, wood and whale carcasses to the oligotrophic deep-sea floor promotes the establishment of locally highly productive and diverse ecosystems, often with specifically adapted benthic communities. However, the fragmented spatial distribution and small area poses challenges for the dispersal of their microbial and faunal communities. Our study focused on the temporal dynamics and spatial distributions of sunken wood bacterial communities, which were deployed in the vicinity of different cold seeps in the Eastern Mediterranean and the Norwegian deep-seas. By combining fingerprinting of bacterial communities by ARISA and 454 sequencing with in situ and ex situ biogeochemical measurements, we show that sunken wood logs have a locally confined long-term impact (> 3y on the sediment geochemistry and community structure. We confirm previous hypotheses of different successional stages in wood degradation including a sulphophilic one, attracting chemosynthetic fauna from nearby seep systems. Wood experiments deployed at similar water depths (1100-1700 m, but in hydrographically different oceanic regions harbored different wood-boring bivalves, opportunistic faunal communities, and chemosynthetic species. Similarly, bacterial communities on sunken wood logs were more similar within one geographic region than between different seas. Diverse sulphate-reducing bacteria of the Deltaproteobacteria, the sulphide-oxidizing bacteria Sulfurovum as well as members of the Acidimicrobiia and Bacteroidia dominated the wood falls in the Eastern Mediterranean, while Alphaproteobacteria and Flavobacteriia colonized the Norwegian Sea wood logs. Fauna and bacterial wood-associated communities changed between 1 to 3 years of immersion, with sulphate-reducers and sulphide-oxidizers increasing in proportion, and putative cellulose degraders decreasing with time. Only 6% of all bacterial genera, comprising the core community, were

  11. Elephant overflows: Multi-annual variability in Weddell Sea Deep Water driven by surface forcing

    Science.gov (United States)

    Meijers, Andrew; Meredith, Michael; Abrahamsen, Povl; Naviera-Garabato, Alberto; Ángel Morales Maqueda, Miguel; Polzin, Kurt

    2015-04-01

    The volume of the deepest and densest water mass in Drake Passage, Lower Weddell Sea Deep Water (LWSDW), is shown to have been decreasing over the last 20 years of observations, with an associated reduction in density driven by freshening. Superimposed on this long term trend is a multi-annual oscillation with a period of 3-5 years. This variability only appears in Drake Passage; observations in the east of the Scotia Sea show a similar long term trend, but with no apparent multi-annual variability. Clues as to the source of this variability may be found on the continental slope at approximately 1000 m immediately north of Elephant Island on the northern tip of the Antarctic Peninsula. Here there is an intermittent westward flowing cold/fresh slope current whose volume and properties are strongly correlated with the LWSDW multi-annual variability, although leading the LWSDW by around one year. As the slope current and LWSDW are separated from each other both geographically and in water mass characteristics, their co-variability implies that they are responding to a common forcing, while the lag between deep LWSDW and shallow slope current provides information on the timescale of this response. A newly available high resolution temperature and salinity multi-year time series from the Elephant Island slope at 1000 m is compared with reanalysis and model derived surface fluxes, sea ice extent and wind stress. We find that there are strong positive relationships between the surface wind stress and heat flux over the shelf at the tip of the Antarctic Peninsula and the properties of the slope current at 1000 m on seasonal to annual timescales. We use tracer release experiments in the Southern Ocean State Estimate (SOSE) model to investigate the lag between the slope current and LWSDW timeseries and hypothesise that the observed multi-annual variability in both water masses is driven by surface forcing over the shelf and the overflow of modified water from the slope in

  12. Mesopelagic Prokaryotes Alter Surface Phytoplankton Production during Simulated Deep Mixing Experiments in Eastern Mediterranean Sea Waters

    Directory of Open Access Journals (Sweden)

    Or Hazan

    2018-01-01

    Full Text Available Mesopelagic prokaryotes (archaea and bacteria, which are transported together with nutrient-rich intermediate-water to the surface layer by deep convection in the oceans (e.g., winter mixing, upwelling systems, can interact with surface microbial populations. This interaction can potentially affect production rates and biomass of surface microbial populations, and thus play an important role in the marine carbon cycle and oceanic carbon sequestration. The Eastern Mediterranean Sea (EMS is one of the most oligotrophic and warm systems in the world's oceans, with usually very shallow winter mixing (<200 m and lack of large-size spring algal blooms. In this study, we collected seawater (0–1,500 m in 9 different cruises at the open EMS during both the stratified and the mixed seasons. We show that the EMS is a highly oligotrophic regime, resulting in low autotrophic biomass and primary productivity and relatively high heterotrophic prokaryotic biomass and production. Further, we simulated deep water mixing in on-board microcosms using Levantine surface (LSW, ~0.5 m and intermediate (LIW, ~400 m waters at a 9:1 ratio, respectively and examined the responses of the microbial populations to such a scenario. We hypothesized that the LIW, being nutrient-rich (e.g., N, P and a “hot-spot” for microbial activity (due to the warm conditions that prevail in these depths, may supply the LSW with not only key-limiting nutrients but also with viable and active heterotrophic prokaryotes that can interact with the ambient surface microbial population. Indeed, we show that LIW heterotrophic prokaryotes negatively affected the surface phytoplankton populations, resulting in lower chlorophyll-a levels and primary production rates. This may be due to out-competition of phytoplankton by LIW populations for resources and/or by a phytoplankton cell lysis via viral infection. Our results suggest that phytoplankton in the EMS may not likely form blooms, even after

  13. The discovery of new deep-sea hydrothermal vent communities in the southern ocean and implications for biogeography.

    Directory of Open Access Journals (Sweden)

    Alex D Rogers

    2012-01-01

    Full Text Available Since the first discovery of deep-sea hydrothermal vents along the Galápagos Rift in 1977, numerous vent sites and endemic faunal assemblages have been found along mid-ocean ridges and back-arc basins at low to mid latitudes. These discoveries have suggested the existence of separate biogeographic provinces in the Atlantic and the North West Pacific, the existence of a province including the South West Pacific and Indian Ocean, and a separation of the North East Pacific, North East Pacific Rise, and South East Pacific Rise. The Southern Ocean is known to be a region of high deep-sea species diversity and centre of origin for the global deep-sea fauna. It has also been proposed as a gateway connecting hydrothermal vents in different oceans but is little explored because of extreme conditions. Since 2009 we have explored two segments of the East Scotia Ridge (ESR in the Southern Ocean using a remotely operated vehicle. In each segment we located deep-sea hydrothermal vents hosting high-temperature black smokers up to 382.8°C and diffuse venting. The chemosynthetic ecosystems hosted by these vents are dominated by a new yeti crab (Kiwa n. sp., stalked barnacles, limpets, peltospiroid gastropods, anemones, and a predatory sea star. Taxa abundant in vent ecosystems in other oceans, including polychaete worms (Siboglinidae, bathymodiolid mussels, and alvinocaridid shrimps, are absent from the ESR vents. These groups, except the Siboglinidae, possess planktotrophic larvae, rare in Antarctic marine invertebrates, suggesting that the environmental conditions of the Southern Ocean may act as a dispersal filter for vent taxa. Evidence from the distinctive fauna, the unique community structure, and multivariate analyses suggest that the Antarctic vent ecosystems represent a new vent biogeographic province. However, multivariate analyses of species present at the ESR and at other deep-sea hydrothermal vents globally indicate that vent biogeography is more

  14. SeaWiFS Deep Blue Aerosol Optical Thickness Monthly Level 3 Climatology Data Gridded at 0.5 Degrees V004

    Data.gov (United States)

    National Aeronautics and Space Administration — The SeaWiFS Deep Blue Level 3 Monthly Climatology Product contains monthly global climatology gridded (0.5 x 0.5 deg) data derived from SeaWiFS Deep Blue Level 3...

  15. [Secondary metabolites from a deep-sea-derived actinomycete Micrococcus sp. R21].

    Science.gov (United States)

    Peng, Kun; Su, Rui-qiang; Zhang, Gai-yun; Cheng, Xuan-xuan; Yang, Quan; Liu, Yong-hong; Yang, Xian-wen

    2015-06-01

    To investigate cytotoxic secondary metabolites of Micrococcus sp. R21, an actinomycete isolated from a deep-sea sediment (-6 310 m; 142 degrees 19. 9' E, 10 degrees 54. 6' N) of the Western Pacific Ocean, column chromatography was introduced over silica gel, ODS, and Sephadex LH-20. As a result, eight compounds were obtained. By mainly detailed analysis of the NMR data, their structures were elucidated as cyclo(4-hydroxy-L-Pro-L-leu) (1), cyclo(L-Pro-L-Gly) (2), cyclo( L-Pro-L-Ala) (3), cyclo( D-Pro-L-Leu) (4), N-β-acetyltryptamine (5), 2-hydroxybenzoic acid (6), and phenylacetic acid (7). Compound 1 exhibited weak cytotoxic activity against RAW264. 7 cells with IC50 value of 9.1 μmol x L(-1).

  16. Deep sea tests of a prototype of the KM3NeT digital optical module

    Energy Technology Data Exchange (ETDEWEB)

    Adrian-Martinez, S.; Ardid, M.; Llorens Alvarez, C.D.; Saldana, M. [Universitat Politecnica de Valencia, Instituto de Investigacion para la Gestion Integrada de las Zonas Costeras, Gandia (Spain); Ageron, M.; Bertin, V.; Beurthey, S.; Billault, M.; Brunner, J.; Caillat, L.; Cosquer, A.; Coyle, P.; Curtil, C.; Destelle, J.J.; Dornic, D.; Gallo, F.; Henry, S.; Keller, P.; Lamare, P.; Royon, J.; Solazzo, M.; Tezier, D.; Theraube, S.; Yatkin, K. [CPPM, Aix-Marseille Universite, CNRS/IN2P3, Marseille (France); Aharonian, F.; Drury, L. [DIAS, Dublin (Ireland); Aiello, S.; Giordano, V.; Leonora, E.; Randazzo, N.; Sipala, V. [INFN, Sezione di Catania, Catania (Italy); Albert, A.; Drouhin, D.; Racca, C. [GRPHE, Universite de Haute Alsace, IUT de Colmar, Colmar (France); Ameli, F.; De Bonis, G.; Nicolau, C.A.; Simeone, F. [INFN, Sezione di Roma, Rome (Italy); Anassontzis, E.G. [National and Kapodistrian University of Athens, Deparment of Physics, Athens (Greece); Anghinolfi, M.; Cereseto, R.; Hugon, C.; Kulikovskiy, V.; Musico, P.; Orzelli, A. [INFN, Sezione di Genova, Genoa (Italy); Anton, G.; Classen, L.; Eberl, T.; Enzenhoefer, A.; Gal, T.; Graf, K.; Heid, T.; Herold, B.; Hofestaedt, J.; Hoessl, J.; James, C.; Kalekin, O.; Kappes, A.; Katz, U.; Lahmann, R.; Reubelt, J.; Schnabel, J.; Seitz, T.; Stransky, D.; Tselengidou, M. [Friedrich-Alexander-Universitaet Erlangen-Nuernberg, Erlangen Centre for Astroparticle Physics, Erlangen (Germany); Anvar, S.; Chateau, F.; Durand, D.; Le Provost, H.; Louis, F.; Moudden, Y.; Zonca, E. [CEA, Irfu/Sedi, Centre de Saclay, Gif-sur-Yvette (France); Asmundis, R. de; Deniskina, N.; Migliozzi, P.; Mollo, C. [INFN, Sezione di Napoli, Naples (Italy); Balasi, K.; Drakopoulou, E.; Markou, C.; Pikounis, K.; Siotis, I.; Stavropoulos, G.; Tzamariudaki, E. [Institute of Nuclear Physics, NCSR ' ' Demokritos' ' , Athens (Greece); Band, H.; Berbee, E.; Berkien, A.; Beveren, V. van; Boer Rookhuizen, H.; Bouwhuis, M.; Gajana, D.; Gebyehu, M.; Heijboer, A.; Heine, E.; Hoek, M. van der; Hogenbirk, J.; Jansweijer, P.; Kieft, G.; Kok, H.; Koopstra, J.; Korporaal, A.; Michael, T.; Mos, S.; Peek, H.; Schmelling, J.; Steijger, J.; Timmer, P.; Vermeulen, J.; Werneke, P.; Wiggers, L.; Zwart, A. [Nikhef, Amsterdam (Netherlands); Barbarino, G.; Barbato, F.; De Rosa, G.; Garufi, F.; Vivolo, D. [INFN, Sezione di Napoli, Naples (Italy); Universita ' Federico II' , Dipartimento di Fisica, Naples (Italy); Barbarito, E.; Ceres, A.; Circella, M.; Mongelli, M.; Sgura, I. [INFN, Sezione di Bari, Bari (Italy); Baret, B.; Baron, S.; Champion, C.; Colonges, S.; Creusot, A.; Galata, S.; Gracia Ruiz, R.; Kouchner, A.; Lindsey Clark, M.; Van Elewyck, V. [APC,Universite Paris Diderot, CNRS/IN2P3, CEA/IRFU Observatoire de Paris, Sorbonne Paris Cite, Paris (France); Belias, A.; Rapidis, P.A.; Trapierakis, H.I. [Institute of Nuclear Physics, NCSR ' ' Demokritos' ' , Athens (Greece); National Observatory of Athens, NESTOR Institute for Deep Sea Research, Technology, and Neutrino Astroparticle Physics, Pylos (Greece); Berg, A.M. van den; Dorosti-Hasankiadeh, Q.; Hevinga, M.A.; Kavatsyuk, O.; Loehner, H.; Wooning, R.H.L. van [KVI-CART, University of Groningen, Groningen (Netherlands); Beverini, N. [INFN, Sezione di Pisa, Pisa (Italy); Universita di Pisa, Dipertimento di Fisica, Pisa (Italy); Biagi, S.; Cecchini, S.; Fusco, L.A.; Margiotta, A.; Spurio, M. [INFN, Sezione di Bologna, Bologna (Italy); Universita di Bologna, Dipartimento di Fisica e Astronomia, Bologna (Italy); Bianucci, S.; Bouhadef, B.; Calamai, M.; Morganti, M.; Raffaelli, F.; Terreni, G. [Universita di Pisa, Dipertimento di Fisica, Pisa (Italy); Birbas, A.; Bourlis, G.; Christopoulou, B.; Gizani, N.; Leisos, A.; Lenis, D.; Tsirigotis, A.; Tzamarias, S. [Hellenic Open University, School of Science and Technology, Patras (Greece); Bormuth, R.; Jong, M. de; Samtleben, D.F.E. [Nikhef, Amsterdam (Netherlands); Leiden University, Leiden Institute of Physics, Leiden (Netherlands); Bouche, V.; Fermani, P.; Masullo, R.; Perrina, C. [INFN, Sezione di Roma, Rome (Italy); Universita di Roma La Sapienza, Dipartimento di Fisica, Rome (Italy); Bozza, C.; Grella, G. [Universita ' Federico II' , Dipartimento di Fisica, Naples (Italy); Universita di Salerno, Dipartimento di Fisica, Fisciano (Italy); Bruijn, R.; Koffeman, E.; Wolf, E. de [Nikhef, Amsterdam (Netherlands); University of Amsterdam, Institute of Physics, Amsterdam (Netherlands); Cacopardo, G.; Caruso, F.; Cocimano, R.; Coniglione, R.; Costa, M.; Cuttone, G.; D' Amato, C.; D' Amico, A.; Distefano, C.; Grasso, R.; Grmek, A.; Imbesi, M.; Larosa, G.; Lattuada, D.; Migneco, E.; Miraglia, A.; Musumeci, M.; Orlando, A.; Papaleo, R.; Pellegrino, C.; Pellegriti, M.G.; Piattelli, P. [INFN, Laboratori Nazionali del Sud, Catania (Italy); Collaboration: KM3NeT Collaboration; and others

    2014-09-15

    The first prototype of a photo-detection unit of the future KM3NeT neutrino telescope has been deployed in the deep waters of the Mediterranean Sea. This digital optical module has a novel design with a very large photocathode area segmented by the use of 31 three inch photomultiplier tubes. It has been integrated in the ANTARES detector for in-situ testing and validation. This paper reports on the first months of data taking and rate measurements. The analysis results highlight the capabilities of the new module design in terms of background suppression and signal recognition. The directionality of the optical module enables the recognition of multiple Cherenkov photons from the same {sup 40}K decay and the localisation of bioluminescent activity in the neighbourhood. The single unit can cleanly identify atmospheric muons and provide sensitivity to the muon arrival directions. (orig.)

  17. Cytoglobosins H and I, New Antiproliferative Cytochalasans from Deep-Sea-Derived Fungus Chaetomium globosum

    Directory of Open Access Journals (Sweden)

    Zhihan Zhang

    2016-12-01

    Full Text Available Cytoglobosins H (1 and I (2, together with seven known cytochalasan alkaloids (3–9, were isolated from the deep-sea-derived fungus Chaetomium globosum. The structures of new compounds 1 and 2 were elucidated by extensive 1D and 2D NMR and mass spectroscopic data. All the compounds were evaluated for their antiproliferative activities against MDA-MB-231 human breast cancer cells, LNCaP human prostate cancer cells, and B16F10 mouse melanoma cells. Compound 6 showed significant antiproliferative activity against LNCaP and B16F10 cell lines with IC50 values of 0.62 and 2.78 μM, respectively. Further testing confirmed that compound 6 inhibited the growth of LNCaP cells by inducing apoptosis.

  18. Siderophile element concentrations in magnetic spherules from deep sea sediments revealed by instrumental neutron activation analysis

    International Nuclear Information System (INIS)

    Nogami, Ken-ichi; Shimamura, Tadashi; Tazawa, Yuji; Yamakoshi, Kazuo.

    1980-01-01

    For the purpose of deciding the extraterrestrial origin of the magnetic spherules found in deep sea sediments, the siderophile elements Co, Ni, Ir and/or Au etc., were measured by instrumental neutron activation analysis. Spherules were collected from red clay samples which were dredged from Mid Pacific Ocean. Only spherules which had smooth surfaces and relatively high specific gravities were chosen for analysis. Existence of Co, Ni and Ir in most spherules suggests the possibility of an extraterrestrial origin for these spherules. It is not clear whether these spherules are droplets ablated from iron meteorites entering into the Earth's atmosphere or they are cosmic iron grains themselves. X-ray diffraction analysis suggested that these spherules are the products of rapid cooling materials. (author)

  19. Biosynthesis of coelenterazine in the deep-sea copepod, Metridia pacifica

    Energy Technology Data Exchange (ETDEWEB)

    Oba, Yuichi; Kato, Shin-ichi; Ojika, Makoto [Graduate School of Bioagricultural Sciences, Nagoya University, Chikusa-ku, Nagoya 464-860 (Japan); Inouye, Satoshi, E-mail: sinouye@chisso.co.jp [Yokohama Research Center, Chisso Co., 5-1 Okawa, Kanazawa-ku, Yokohama 236-8605 (Japan)

    2009-12-18

    Coelenterazine is an imidazopyrazinone compound (3,7-dihydroimidazopyrazin-3-one structure) that is widely distributed in marine organisms and used as a luciferin for various bioluminescence reactions. We have used electrospray ionization-ion trap-mass spectrometry to investigate whether the deep-sea luminous copepod Metridia pacifica is able to synthesize coelenterazine. By feeding experiments using deuterium labeled amino acids of L-tyrosine and L-phenylalanine, we have shown that coelenterazine can be synthesized from two molecules of L-tyrosine and one molecule of L-phenylalanine in M. pacifica. This is the first demonstration that coelenterazine is biosynthesized from free L-amino acids in a marine organism.

  20. Deep sea tests of a prototype of the KM3NeT digital optical module

    Science.gov (United States)

    Adrián-Martínez, S.; Ageron, M.; Aharonian, F.; Aiello, S.; Albert, A.; Ameli, F.; Anassontzis, E. G.; Anghinolfi, M.; Anton, G.; Anvar, S.; Ardid, M.; de Asmundis, R.; Balasi, K.; Band, H.; Barbarino, G.; Barbarito, E.; Barbato, F.; Baret, B.; Baron, S.; Belias, A.; Berbee, E.; van den Berg, A. M.; Berkien, A.; Bertin, V.; Beurthey, S.; van Beveren, V.; Beverini, N.; Biagi, S.; Bianucci, S.; Billault, M.; Birbas, A.; Boer Rookhuizen, H.; Bormuth, R.; Bouché, V.; Bouhadef, B.; Bourlis, G.; Bouwhuis, M.; Bozza, C.; Bruijn, R.; Brunner, J.; Cacopardo, G.; Caillat, L.; Calamai, M.; Calvo, D.; Capone, A.; Caramete, L.; Caruso, F.; Cecchini, S.; Ceres, A.; Cereseto, R.; Champion, C.; Château, F.; Chiarusi, T.; Christopoulou, B.; Circella, M.; Classen, L.; Cocimano, R.; Colonges, S.; Coniglione, R.; Cosquer, A.; Costa, M.; Coyle, P.; Creusot, A.; Curtil, C.; Cuttone, G.; D'Amato, C.; D'Amico, A.; De Bonis, G.; De Rosa, G.; Deniskina, N.; Destelle, J.-J.; Distefano, C.; Donzaud, C.; Dornic, D.; Dorosti-Hasankiadeh, Q.; Drakopoulou, E.; Drouhin, D.; Drury, L.; Durand, D.; Eberl, T.; Eleftheriadis, C.; Elsaesser, D.; Enzenhöfer, A.; Fermani, P.; Fusco, L. A.; Gajana, D.; Gal, T.; Galatà, S.; Gallo, F.; Garufi, F.; Gebyehu, M.; Giordano, V.; Gizani, N.; Gracia Ruiz, R.; Graf, K.; Grasso, R.; Grella, G.; Grmek, A.; Habel, R.; van Haren, H.; Heid, T.; Heijboer, A.; Heine, E.; Henry, S.; Hernández-Rey, J. J.; Herold, B.; Hevinga, M. A.; van der Hoek, M.; Hofestädt, J.; Hogenbirk, J.; Hugon, C.; Hößl, J.; Imbesi, M.; James, C.; Jansweijer, P.; Jochum, J.; de Jong, M.; Kadler, M.; Kalekin, O.; Kappes, A.; Kappos, E.; Katz, U.; Kavatsyuk, O.; Keller, P.; Kieft, G.; Koffeman, E.; Kok, H.; Kooijman, P.; Koopstra, J.; Korporaal, A.; Kouchner, A.; Koutsoukos, S.; Kreykenbohm, I.; Kulikovskiy, V.; Lahmann, R.; Lamare, P.; Larosa, G.; Lattuada, D.; Le Provost, H.; Leisos, A.; Lenis, D.; Leonora, E.; Lindsey Clark, M.; Liolios, A.; Llorens Alvarez, C. D.; Löhner, H.; Lo Presti, D.; Louis, F.; Maccioni, E.; Mannheim, K.; Manolopoulos, K.; Margiotta, A.; Mariş, O.; Markou, C.; Martínez-Mora, J. A.; Martini, A.; Masullo, R.; Michael, T.; Migliozzi, P.; Migneco, E.; Miraglia, A.; Mollo, C.; Mongelli, M.; Morganti, M.; Mos, S.; Moudden, Y.; Musico, P.; Musumeci, M.; Nicolaou, C.; Nicolau, C. A.; Orlando, A.; Orzelli, A.; Papageorgiou, K.; Papaikonomou, A.; Papaleo, R.; Păvălaş, G. E.; Peek, H.; Pellegrino, C.; Pellegriti, M. G.; Perrina, C.; Petridou, C.; Piattelli, P.; Pikounis, K.; Popa, V.; Pradier, Th.; Priede, M.; Pühlhofer, G.; Pulvirenti, S.; Racca, C.; Raffaelli, F.; Randazzo, N.; Rapidis, P. A.; Razis, P.; Real, D.; Resvanis, L.; Reubelt, J.; Riccobene, G.; Rovelli, A.; Royon, J.; Saldaña, M.; Samtleben, D. F. E.; Sanguineti, M.; Santangelo, A.; Sapienza, P.; Savvidis, I.; Schmelling, J.; Schnabel, J.; Sedita, M.; Seitz, T.; Sgura, I.; Simeone, F.; Siotis, I.; Sipala, V.; Solazzo, M.; Spitaleri, A.; Spurio, M.; Stavropoulos, G.; Steijger, J.; Stolarczyk, T.; Stransky, D.; Taiuti, M.; Terreni, G.; Tézier, D.; Théraube, S.; Thompson, L. F.; Timmer, P.; Trapierakis, H. I.; Trasatti, L.; Trovato, A.; Tselengidou, M.; Tsirigotis, A.; Tzamarias, S.; Tzamariudaki, E.; Vallage, B.; Van Elewyck, V.; Vermeulen, J.; Vernin, P.; Viola, S.; Vivolo, D.; Werneke, P.; Wiggers, L.; Wilms, J.; de Wolf, E.; van Wooning, R. H. L.; Yatkin, K.; Zachariadou, K.; Zonca, E.; Zornoza, J. D.; Zúñiga, J.; Zwart, A.

    2014-09-01

    The first prototype of a photo-detection unit of the future KM3NeT neutrino telescope has been deployed in the deep waters of the Mediterranean Sea. This digital optical module has a novel design with a very large photocathode area segmented by the use of 31 three inch photomultiplier tubes. It has been integrated in the ANTARES detector for in-situ testing and validation. This paper reports on the first months of data taking and rate measurements. The analysis results highlight the capabilities of the new module design in terms of background suppression and signal recognition. The directionality of the optical module enables the recognition of multiple Cherenkov photons from the same $^{40}$K decay and the localization bioluminescent activity in the neighbourhood. The single unit can cleanly identify atmospheric muons and provide sensitivity to the muon arrival directions.

  1. Brevianamides and Mycophenolic Acid Derivatives from the Deep-Sea-Derived Fungus Penicillium brevicompactum DFFSCS025

    Directory of Open Access Journals (Sweden)

    Xinya Xu

    2017-02-01

    Full Text Available Four new compounds (1–4, including two brevianamides and two mycochromenic acid derivatives along with six known compounds were isolated from the deep-sea-derived fungus Penicillium brevicompactum DFFSCS025. Their structures were elucidated by spectroscopic analysis. Moreover, the absolute configurations of 1 and 2 were determined by quantum chemical calculations of the electronic circular dichroism (ECD spectra. Compound 9 showed moderate cytotoxicity against human colon cancer HCT116 cell line with IC50 value of 15.6 μM. In addition, 3 and 5 had significant antifouling activity against Bugula neritina larval settlement with EC50 values of 13.7 and 22.6 μM, respectively. The NMR data of 6, 8, and 9 were assigned for the first time.

  2. Deep sea tests of a prototype of the KM3NeT digital optical module

    International Nuclear Information System (INIS)

    Adrian-Martinez, S.; Ardid, M.; Llorens Alvarez, C.D.; Saldana, M.; Ageron, M.; Bertin, V.; Beurthey, S.; Billault, M.; Brunner, J.; Caillat, L.; Cosquer, A.; Coyle, P.; Curtil, C.; Destelle, J.J.; Dornic, D.; Gallo, F.; Henry, S.; Keller, P.; Lamare, P.; Royon, J.; Solazzo, M.; Tezier, D.; Theraube, S.; Yatkin, K.; Aharonian, F.; Drury, L.; Aiello, S.; Giordano, V.; Leonora, E.; Randazzo, N.; Sipala, V.; Albert, A.; Drouhin, D.; Racca, C.; Ameli, F.; De Bonis, G.; Nicolau, C.A.; Simeone, F.; Anassontzis, E.G.; Anghinolfi, M.; Cereseto, R.; Hugon, C.; Kulikovskiy, V.; Musico, P.; Orzelli, A.; Anton, G.; Classen, L.; Eberl, T.; Enzenhoefer, A.; Gal, T.; Graf, K.; Heid, T.; Herold, B.; Hofestaedt, J.; Hoessl, J.; James, C.; Kalekin, O.; Kappes, A.; Katz, U.; Lahmann, R.; Reubelt, J.; Schnabel, J.; Seitz, T.; Stransky, D.; Tselengidou, M.; Anvar, S.; Chateau, F.; Durand, D.; Le Provost, H.; Louis, F.; Moudden, Y.; Zonca, E.; Asmundis, R. de; Deniskina, N.; Migliozzi, P.; Mollo, C.; Balasi, K.; Drakopoulou, E.; Markou, C.; Pikounis, K.; Siotis, I.; Stavropoulos, G.; Tzamariudaki, E.; Band, H.; Berbee, E.; Berkien, A.; Beveren, V. van; Boer Rookhuizen, H.; Bouwhuis, M.; Gajana, D.; Gebyehu, M.; Heijboer, A.; Heine, E.; Hoek, M. van der; Hogenbirk, J.; Jansweijer, P.; Kieft, G.; Kok, H.; Koopstra, J.; Korporaal, A.; Michael, T.; Mos, S.; Peek, H.; Schmelling, J.; Steijger, J.; Timmer, P.; Vermeulen, J.; Werneke, P.; Wiggers, L.; Zwart, A.; Barbarino, G.; Barbato, F.; De Rosa, G.; Garufi, F.; Vivolo, D.; Barbarito, E.; Ceres, A.; Circella, M.; Mongelli, M.; Sgura, I.; Baret, B.; Baron, S.; Champion, C.; Colonges, S.; Creusot, A.; Galata, S.; Gracia Ruiz, R.; Kouchner, A.; Lindsey Clark, M.; Van Elewyck, V.; Belias, A.; Rapidis, P.A.; Trapierakis, H.I.; Berg, A.M. van den; Dorosti-Hasankiadeh, Q.; Hevinga, M.A.; Kavatsyuk, O.; Loehner, H.; Wooning, R.H.L. van; Beverini, N.; Biagi, S.; Cecchini, S.; Fusco, L.A.; Margiotta, A.; Spurio, M.; Bianucci, S.; Bouhadef, B.; Calamai, M.; Morganti, M.; Raffaelli, F.; Terreni, G.; Birbas, A.; Bourlis, G.; Christopoulou, B.; Gizani, N.; Leisos, A.; Lenis, D.; Tsirigotis, A.; Tzamarias, S.; Bormuth, R.; Jong, M. de; Samtleben, D.F.E.; Bouche, V.; Fermani, P.; Masullo, R.; Perrina, C.; Bozza, C.; Grella, G.; Bruijn, R.; Koffeman, E.; Wolf, E. de; Cacopardo, G.; Caruso, F.; Cocimano, R.; Coniglione, R.; Costa, M.; Cuttone, G.; D'Amato, C.; D'Amico, A.; Distefano, C.; Grasso, R.; Grmek, A.; Imbesi, M.; Larosa, G.; Lattuada, D.; Migneco, E.; Miraglia, A.; Musumeci, M.; Orlando, A.; Papaleo, R.; Pellegrino, C.; Pellegriti, M.G.; Piattelli, P.

    2014-01-01

    The first prototype of a photo-detection unit of the future KM3NeT neutrino telescope has been deployed in the deep waters of the Mediterranean Sea. This digital optical module has a novel design with a very large photocathode area segmented by the use of 31 three inch photomultiplier tubes. It has been integrated in the ANTARES detector for in-situ testing and validation. This paper reports on the first months of data taking and rate measurements. The analysis results highlight the capabilities of the new module design in terms of background suppression and signal recognition. The directionality of the optical module enables the recognition of multiple Cherenkov photons from the same 40 K decay and the localisation of bioluminescent activity in the neighbourhood. The single unit can cleanly identify atmospheric muons and provide sensitivity to the muon arrival directions. (orig.)

  3. Biosynthesis of coelenterazine in the deep-sea copepod, Metridia pacifica

    International Nuclear Information System (INIS)

    Oba, Yuichi; Kato, Shin-ichi; Ojika, Makoto; Inouye, Satoshi

    2009-01-01

    Coelenterazine is an imidazopyrazinone compound (3,7-dihydroimidazopyrazin-3-one structure) that is widely distributed in marine organisms and used as a luciferin for various bioluminescence reactions. We have used electrospray ionization-ion trap-mass spectrometry to investigate whether the deep-sea luminous copepod Metridia pacifica is able to synthesize coelenterazine. By feeding experiments using deuterium labeled amino acids of L-tyrosine and L-phenylalanine, we have shown that coelenterazine can be synthesized from two molecules of L-tyrosine and one molecule of L-phenylalanine in M. pacifica. This is the first demonstration that coelenterazine is biosynthesized from free L-amino acids in a marine organism.

  4. Deep-Sea Astronomy: Searching for Signals of Recent Nucleosynthesis in the Local Universe with AMS

    International Nuclear Information System (INIS)

    Feige, J.

    2012-01-01

    Stars with masses larger than 8 Msun end their life in a supernova (SN) explosion. The nuclides, which are created in the late burning phases of such stars and also during the explosion are ejected and entrained in the SN-shell. This material expands rapidly into the surrounding interstellar medium. Such events happened in the recent history in our solar neighborhood and led to the formation of the Local Bubble, characterized as a hot void embedding our solar system. Minute traces of close-by SN ejects might be found in terrestrial archives and can potentially be detected by accelerator mass spectrometry (AMS). I will report on the search for SN-ejected long-lived radionuclides in two deep-sea sediment cores from the Indian Ocean. (author)

  5. New Polyphenols from a Deep Sea Spiromastix sp. Fungus, and Their Antibacterial Activities

    Directory of Open Access Journals (Sweden)

    Siwen Niu

    2015-04-01

    Full Text Available Eleven new polyphenols namely spiromastols A–K (1–11 were isolated from the fermentation broth of a deep sea-derived fungus Spiromastix sp. MCCC 3A00308. Their structures were determined by extensive NMR data and mass spectroscopic analysis in association with chemical conversion. The structures are classified as diphenyl ethers, diphenyl esters and isocoumarin derivatives, while the n-propyl group in the analogues is rarely found in natural products. Compounds 1–3 exhibited potent inhibitory effects against a panel of bacterial strains, including Xanthomanes vesicatoria, Pseudomonas lachrymans, Agrobacterium tumefaciens, Ralstonia solanacearum, Bacillus thuringensis, Staphylococcus aureus and Bacillus subtilis, with minimal inhibitory concentration (MIC values ranging from 0.25 to 4 µg/mL. The structure-activity relationships are discussed, while the polychlorinated analogues 1–3 are assumed to be a promising structural model for further development as antibacterial agents.

  6. Earth system feedback statistically extracted from the Indian Ocean deep-sea sediments recording Eocene hyperthermals.

    Science.gov (United States)

    Yasukawa, Kazutaka; Nakamura, Kentaro; Fujinaga, Koichiro; Ikehara, Minoru; Kato, Yasuhiro

    2017-09-12

    Multiple transient global warming events occurred during the early Palaeogene. Although these events, called hyperthermals, have been reported from around the globe, geologic records for the Indian Ocean are limited. In addition, the recovery processes from relatively modest hyperthermals are less constrained than those from the severest and well-studied hothouse called the Palaeocene-Eocene Thermal Maximum. In this study, we constructed a new and high-resolution geochemical dataset of deep-sea sediments clearly recording multiple Eocene hyperthermals in the Indian Ocean. We then statistically analysed the high-dimensional data matrix and extracted independent components corresponding to the biogeochemical responses to the hyperthermals. The productivity feedback commonly controls and efficiently sequesters the excess carbon in the recovery phases of the hyperthermals via an enhanced biological pump, regardless of the magnitude of the events. Meanwhile, this negative feedback is independent of nannoplankton assemblage changes generally recognised in relatively large environmental perturbations.

  7. Microbial processes in North Atlantic pelagic sediments, and potential risks of deep-sea waste disposal

    International Nuclear Information System (INIS)

    Bolliger, R.; Hanselmann, K.W.; Bachofen, R.

    1989-01-01

    From the results for waste disposal on deep sea sediments, it was concluded: As waste canisters are buried in the sediment to a depth of 15 to 20 cm, they are in contact with the zone that contains the highest potential bacterial activity through a relatively large surface. An input of oxidizable organic matter to the sediment surface zone will stimulate microbial activity and therefore increase the risk for solubilization and redistribution of elements in the ocean water. Waste canisters lying on the sediment surface cut off the oxygen supply from the ocean water and ease the shift to anaerobiosis. This initiates microbial activities through which metals are changed into their mobile species as a consequence of the altered environmental redox potential. The risk for steel corrosion by hydrogen sulfide, which could be produced by sulfate reducing bacteria, is minimal since this physiological group is not active in the North Atlantic sediments examined

  8. Physiological effects of environmental acidification in the deep-sea urchin Strongylocentrotus fragilis

    Science.gov (United States)

    Taylor, J. R.; Lovera, C.; Whaling, P. J.; Buck, K. R.; Pane, E. F.; Barry, J. P.

    2014-03-01

    Anthropogenic CO2 is now reaching depths over 1000 m in the Eastern Pacific, overlapping the Oxygen Minimum Zone (OMZ). Deep-sea animals are suspected to be especially sensitive to environmental acidification associated with global climate change. We have investigated the effects of elevated pCO2 and variable O2 on the deep-sea urchin Strongylocentrotus fragilis, a species whose range of 200-1200 m depth includes the OMZ and spans a pCO2 range of approx. 600-1200 μatm (approx. pH 7.6 to 7.8). Individuals were evaluated during two exposure experiments (1-month and 4 month) at control and three levels of elevated pCO2 at in situ O2 levels of approx. 10% air saturation. A treatment of control pCO2 at 100% air saturation was also included in experiment two. During the first experiment, perivisceral coelomic fluid (PCF) acid-base balance was investigated during a one-month exposure; results show S. fragilis has limited ability to compensate for the respiratory acidosis brought on by elevated pCO2, due in part to low non-bicarbonate PCF buffering capacity. During the second experiment, individuals were separated into fed and fasted experimental groups, and longer-term effects of elevated pCO2 and variable O2 on righting time, feeding, growth, and gonadosomatic index (GSI) were investigated for both groups. Results suggest that the acidosis found during experiment one does not directly correlate with adverse effects during exposure to realistic future pCO2 levels.

  9. Biological responses to disturbance from simulated deep-sea polymetallic nodule mining.

    Directory of Open Access Journals (Sweden)

    Daniel O B Jones

    Full Text Available Commercial-scale mining for polymetallic nodules could have a major impact on the deep-sea environment, but the effects of these mining activities on deep-sea ecosystems are very poorly known. The first commercial test mining for polymetallic nodules was carried out in 1970. Since then a number of small-scale commercial test mining or scientific disturbance studies have been carried out. Here we evaluate changes in faunal densities and diversity of benthic communities measured in response to these 11 simulated or test nodule mining disturbances using meta-analysis techniques. We find that impacts are often severe immediately after mining, with major negative changes in density and diversity of most groups occurring. However, in some cases, the mobile fauna and small-sized fauna experienced less negative impacts over the longer term. At seven sites in the Pacific, multiple surveys assessed recovery in fauna over periods of up to 26 years. Almost all studies show some recovery in faunal density and diversity for meiofauna and mobile megafauna, often within one year. However, very few faunal groups return to baseline or control conditions after two decades. The effects of polymetallic nodule mining are likely to be long term. Our analyses show considerable negative biological effects of seafloor nodule mining, even at the small scale of test mining experiments, although there is variation in sensitivity amongst organisms of different sizes and functional groups, which have important implications for ecosystem responses. Unfortunately, many past studies have limitations that reduce their effectiveness in determining responses. We provide recommendations to improve future mining impact test studies. Further research to assess the effects of test-mining activities will inform ways to improve mining practices and guide effective environmental management of mining activities.

  10. Biological responses to disturbance from simulated deep-sea polymetallic nodule mining.

    Science.gov (United States)

    Jones, Daniel O B; Kaiser, Stefanie; Sweetman, Andrew K; Smith, Craig R; Menot, Lenaick; Vink, Annemiek; Trueblood, Dwight; Greinert, Jens; Billett, David S M; Arbizu, Pedro Martinez; Radziejewska, Teresa; Singh, Ravail; Ingole, Baban; Stratmann, Tanja; Simon-Lledó, Erik; Durden, Jennifer M; Clark, Malcolm R

    2017-01-01

    Commercial-scale mining for polymetallic nodules could have a major impact on the deep-sea environment, but the effects of these mining activities on deep-sea ecosystems are very poorly known. The first commercial test mining for polymetallic nodules was carried out in 1970. Since then a number of small-scale commercial test mining or scientific disturbance studies have been carried out. Here we evaluate changes in faunal densities and diversity of benthic communities measured in response to these 11 simulated or test nodule mining disturbances using meta-analysis techniques. We find that impacts are often severe immediately after mining, with major negative changes in density and diversity of most groups occurring. However, in some cases, the mobile fauna and small-sized fauna experienced less negative impacts over the longer term. At seven sites in the Pacific, multiple surveys assessed recovery in fauna over periods of up to 26 years. Almost all studies show some recovery in faunal density and diversity for meiofauna and mobile megafauna, often within one year. However, very few faunal groups return to baseline or control conditions after two decades. The effects of polymetallic nodule mining are likely to be long term. Our analyses show considerable negative biological effects of seafloor nodule mining, even at the small scale of test mining experiments, although there is variation in sensitivity amongst organisms of different sizes and functional groups, which have important implications for ecosystem responses. Unfortunately, many past studies have limitations that reduce their effectiveness in determining responses. We provide recommendations to improve future mining impact test studies. Further research to assess the effects of test-mining activities will inform ways to improve mining practices and guide effective environmental management of mining activities.

  11. Ancient deep-sea sponge grounds on the Flemish Cap and Grand Bank, northwest Atlantic.

    Science.gov (United States)

    Murillo, F J; Kenchington, E; Lawson, J M; Li, G; Piper, D J W

    Recent studies on deep-sea sponges have focused on mapping contemporary distributions while little work has been done to map historical distributions; historical distributions can provide valuable information on the time frame over which species have co-evolved and may provide insight into the reasons for their persistence or decline. Members of the sponge family Geodiidae are dominant members of deep-sea sponge assemblages in the northwestern Atlantic. They possess unique spicules called sterrasters, which undergo little transport in sediment and can therefore indicate the Geodiidae sponge historical presence when found in sediment cores. This study focuses on the slopes of Flemish Cap and Grand Bank, important fishing grounds off the coast of Newfoundland, Canada, in international waters. Sediment cores collected in 2009 and 2010 were visually inspected for sponge spicules. Cores containing spicules were sub-sampled and examined under a light microscope for the presence of sterrasters. These cores were also dated using X-radiographs and grouped into five time categories based on known sediment horizons, ranging from 17,000 years BP to the present. Chronological groupings identified Geodiidae sponges in four persistent sponge grounds. The oldest sterrasters were concentrated in the eastern region of the Flemish Cap and on the southeastern slope of the Grand Bank. Opportunistic sampling of a long core in the southeastern region of the Flemish Cap showed the continuous presence of sponge spicules to more than 130 ka BP. Our results indicate that the geodiids underwent a significant range expansion following deglaciation, and support a contemporary distribution that is not shaped by recent fishing activity.

  12. Giant siliceous spicules from the deep-sea glass sponge Monorhaphis chuni.

    Science.gov (United States)

    Wang, Xiaohong; Schröder, Heinz C; Müller, Werner E G

    2009-01-01

    Only 13 years after realizing, during a repair of a telegraph cable pulled out from the deep sea, that the depth of the ocean is plentifully populated with a highly diverse fauna and flora, the Challenger expedition (1873-1876) treasured up a rich collection of vitreous sponges (Hexactinellida). They had been described by Schulze and represent the phylogenetically oldest class of siliceous sponges (phylum Porifera); they are eye-catching because of their distinct body plan, which relies on a filigree skeleton. It is constructed by an array of morphologically determined elements, the spicules. Soon after, during the German Deep Sea Expedition "Valdivia" (1898-1899), Schulze could describe the largest siliceous hexactinellid sponge on Earth, the up to 3-m high Monorhaphis chuni, which develops the equally largest bio-silica structure, the giant basal spicules (3 mx10 mm). Using these spicules as a model, basic knowledge on the morphology, formation, and development of the skeletal elements could be achieved. They are formed by a proteinaceous scaffold (composed of a 27-kDa protein), which mediates the formation of the siliceous lamellae, into which the proteins are encased. The high number of 800 of 5-10 microm thick lamellae is concentrically arranged around the axial canal. The silica matrix is composed of almost pure silicon oxide, providing it with unusually optophysical properties, which are superior to those of man-made waveguides. Experiments might suggest that the spicules function in vivo as a nonocular photoreception system. In addition, the spicules have exceptional mechanical properties, combining mechanical stability with strength and stiffness. Like demosponges, also the hexactinellids synthesize their silica enzymatically, via the enzyme silicatein (27-kDa protein). It is suggested that these basic insights will surely contribute to a further applied utilization and exploration of silica in bio-material/biomedical science.

  13. A simple model for the dispersion of radioactive wastes dumped on the deep-sea bed

    International Nuclear Information System (INIS)

    Shepherd, J.G.

    1976-01-01

    A simple model has been developed for the dispersion of radioactive materials in a closed and finite ocean. It allows for the simultaneous action of both diffusion and horizontal (but not vertical) advection, and thus avoids the major limitations of previous models such as that of Webb and Morley. It is sufficiently versatile to handle non-Fickian diffusion and radioactive decay, but requires numerical integration using some semi-empirical form for the Green's function of diffusion from a point source. The model has been used to estimate equilibrium concentrations of radioactive materials in sea water arising from the continuous release of material from a dump on the bottom of the deep ocean, using parameters appropriate for the North Atlantic. It is found that except under rather extreme conditions the surface concentrations do not exceed the long-term average value which would be established in a perfectly mixed ocean. The concentrations are also rather insensitive to the values of the diffusion and advection parameters used, except for that for vertical diffusion, but depend strongly on the overall removal rate of material from the ocean, including processes other than radioactive decay. It is suggested that safety assessments of deep-sea dumping should utilize estimates of the environmental capacities of the oceans based on the long-term 'well-mixed' average concentrations (which are very easily calculated) using a safety factor of no more than ten to allow for the possible effects of pluming and upwelling. In so far as their results are comparable, the present model yields estimates which are close to those of the Webb-Morley model for overall half-lives between 30 and 3000 years, but which become increasingly more restrictive for longer-lived materials. (author)

  14. Exploring the Ecology of Deep-Sea Hydrothermal Vents in a Metacommunity Framework

    Directory of Open Access Journals (Sweden)

    Lauren S. Mullineaux

    2018-02-01

    Full Text Available Species inhabiting deep-sea hydrothermal vents are strongly influenced by the geological setting, as it provides the chemical-rich fluids supporting the food web, creates the patchwork of seafloor habitat, and generates catastrophic disturbances that can eradicate entire communities. The patches of vent habitat host a network of communities (a metacommunity connected by dispersal of planktonic larvae. The dynamics of the metacommunity are influenced not only by birth rates, death rates and interactions of populations at the local site, but also by regional influences on dispersal from different sites. The connections to other communities provide a mechanism for dynamics at a local site to affect features of the regional biota. In this paper, we explore the challenges and potential benefits of applying metacommunity theory to vent communities, with a particular focus on effects of disturbance. We synthesize field observations to inform models and identify data gaps that need to be addressed to answer key questions including: (1 what is the influence of the magnitude and rate of disturbance on ecological attributes, such as time to extinction or resilience in a metacommunity; (2 what interactions between local and regional processes control species diversity, and (3 which communities are “hot spots” of key ecological significance. We conclude by assessing our ability to evaluate resilience of vent metacommunities to human disturbance (e.g., deep-sea mining. Although the resilience of a few highly disturbed vent systems in the eastern Pacific has been quantified, these values cannot be generalized to remote locales in the western Pacific or mid Atlantic where disturbance rates are different and information on local controls is missing.

  15. Influence of tropical atmospheric variability on Weddell Sea deep water convection

    Science.gov (United States)

    Kleppin, H.

    2016-02-01

    Climate reconstructions from ice core records in Greenland and Antarctica have revealed a series of abrupt climate transitions, showing a distinct relationship between northern and southern hemisphere climate during the last glacial period. The recent ice core records from West Antarctica (WAIS) point towards an atmospheric teleconnection as a possible trigger for the interhemispheric climate variability (Markle et al., 2015). An unforced simulation of the Community Climate System Model, version 4 (CCSM4) reveals Greenland warming and cooling events, caused by stochastic atmospheric forcing, that resemble Dansgaard-Oeschger cycles in pattern and magnitude (Kleppin et al., 2015). Anti-phased temperature changes in the Southern Hemisphere are small in magnitude and have a spatially varying pattern. We argue that both north and south high latitude climate variability is triggered by changes in tropical atmospheric deep convection in the western tropical Pacific. The atmospheric wave guide provides a fast communication pathway connecting the deep tropics and the polar regions. In the Southern Hemisphere this is manifested as a distinct pressure pattern over West Antarctica. These altered atmospheric surface conditions over the convective region can lead to destabilization of the water column and thus to convective overturning in the Weddell Sea. However, opposed to what is seen in the Northern Hemisphere no centennial scale variability can establish, due to the absence of a strong feedback mechanism between ocean, atmosphere and sea ice. Kleppin, H., Jochum, M., Otto-Bliesner, B., Shields, C. A., & Yeager, S. (2015). Stochastic Atmospheric Forcing as a Cause of Greenland Climate Transitions. Journal of Climate, (2015). Markle, B. and Coauthors (2015, April). Atmospheric teleconnections between the tropics and high southern latitudes during millennial climate change. In EGU General Assembly Conference Abstracts (Vol. 17, p. 2569).

  16. Pollen from the Deep-Sea: A Breakthrough in the Mystery of the Ice Ages

    Directory of Open Access Journals (Sweden)

    María F. Sánchez Goñi

    2018-01-01

    Full Text Available Pollen from deep-sea sedimentary sequences provides an integrated regional reconstruction of vegetation and climate (temperature, precipitation, and seasonality on the adjacent continent. More importantly, the direct correlation of pollen, marine and ice indicators allows comparison of the atmospheric climatic changes that have affected the continent with the response of the Earth’s other reservoirs, i.e., the oceans and cryosphere, without any chronological uncertainty. The study of long continuous pollen records from the European margin has revealed a changing and complex interplay between European climate, North Atlantic sea surface temperatures (SSTs, ice growth and decay, and high- and low-latitude forcing at orbital and millennial timescales. These records have shown that the amplitude of the last five terrestrial interglacials was similar above 40°N, while below 40°N their magnitude differed due to precession-modulated changes in seasonality and, particularly, winter precipitation. These records also showed that vegetation response was in dynamic equilibrium with rapid climate changes such as the Dangaard-Oeschger (D-O cycles and Heinrich events, similar in magnitude and velocity to the ongoing global warming. However, the magnitude of the millennial-scale warming events of the last glacial period was regionally-specific. Precession seems to have imprinted regions below 40°N while obliquity, which controls average annual temperature, probably mediated the impact of D-O warming events above 40°N. A decoupling between high- and low-latitude climate was also observed within last glacial warm (Greenland interstadials and cold phases (Greenland stadials. The synchronous response of western European vegetation/climate and eastern North Atlantic SSTs to D-O cycles was not a pervasive feature throughout the Quaternary. During periods of ice growth such as MIS 5a/4, MIS 11c/b and MIS 19c/b, repeated millennial-scale cold-air/warm-sea

  17. Pollen from the Deep-Sea: A Breakthrough in the Mystery of the Ice Ages.

    Science.gov (United States)

    Sánchez Goñi, María F; Desprat, Stéphanie; Fletcher, William J; Morales-Molino, César; Naughton, Filipa; Oliveira, Dulce; Urrego, Dunia H; Zorzi, Coralie

    2018-01-01

    Pollen from deep-sea sedimentary sequences provides an integrated regional reconstruction of vegetation and climate (temperature, precipitation, and seasonality) on the adjacent continent. More importantly, the direct correlation of pollen, marine and ice indicators allows comparison of the atmospheric climatic changes that have affected the continent with the response of the Earth's other reservoirs, i.e., the oceans and cryosphere, without any chronological uncertainty. The study of long continuous pollen records from the European margin has revealed a changing and complex interplay between European climate, North Atlantic sea surface temperatures (SSTs), ice growth and decay, and high- and low-latitude forcing at orbital and millennial timescales. These records have shown that the amplitude of the last five terrestrial interglacials was similar above 40°N, while below 40°N their magnitude differed due to precession-modulated changes in seasonality and, particularly, winter precipitation. These records also showed that vegetation response was in dynamic equilibrium with rapid climate changes such as the Dangaard-Oeschger (D-O) cycles and Heinrich events, similar in magnitude and velocity to the ongoing global warming. However, the magnitude of the millennial-scale warming events of the last glacial period was regionally-specific. Precession seems to have imprinted regions below 40°N while obliquity, which controls average annual temperature, probably mediated the impact of D-O warming events above 40°N. A decoupling between high- and low-latitude climate was also observed within last glacial warm (Greenland interstadials) and cold phases (Greenland stadials). The synchronous response of western European vegetation/climate and eastern North Atlantic SSTs to D-O cycles was not a pervasive feature throughout the Quaternary. During periods of ice growth such as MIS 5a/4, MIS 11c/b and MIS 19c/b, repeated millennial-scale cold-air/warm-sea decoupling events

  18. 75 FR 27219 - Fisheries of the Northeastern United States; Atlantic Deep-Sea Red Crab Fisheries; 2010 Atlantic...

    Science.gov (United States)

    2010-05-14

    .... Whereas a limited market has been responsible for the shortfall in landings compared to the target TAC... final specifications for the 2010 Atlantic deep- sea red crab fishery, including a target total... specify the target TAC and other management measures in order to manage the red crab resource for fishing...

  19. Archive of Core and Site/Hole Data and Photographs from the Deep Sea Drilling Project (DSDP)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The Deep Sea Drilling Project (DSDP) operated the D/V GLOMAR CHALLENGER from 1968-1983, drilling 1,112 holes at 624 sites worldwide. The DSDP was funded by the US...

  20. Genome sequence of Halorhabdus tiamatea, the first archaeon isolated from a deep-sea anoxic brine lake.

    KAUST Repository

    Antunes, Andre

    2011-09-01

    We present the draft genome of Halorhabdus tiamatea, the first member of the Archaea ever isolated from a deep-sea anoxic brine. Genome comparison with Halorhabdus utahensis revealed some striking differences, including a marked increase in genes associated with transmembrane transport and putative genes for a trehalose synthase and a lactate dehydrogenase.

  1. Genome sequence of Haloplasma contractile, an unusual contractile bacterium from a deep-sea anoxic brine lake.

    KAUST Repository

    Antunes, Andre; Alam, Intikhab; El Dorry, Hamza; Siam, Rania; Robertson, Anthony J.; Bajic, Vladimir B.; Stingl, Ulrich

    2011-01-01

    We present the draft genome of Haloplasma contractile, isolated from a deep-sea brine and representing a new order between Firmicutes and Mollicutes. Its complex morphology with contractile protrusions might be strongly influenced by the presence of seven MreB/Mbl homologs, which appears to be the highest copy number ever reported.

  2. Micrometer- and nanometer-sized platinum group nuggets in micrometeorites from deep-sea sediments of the Indian Ocean

    Digital Repository Service at National Institute of Oceanography (India)

    Rudraswami, N.G.; Parashar, K.; ShyamPrasad, M.

    We examined 378 micrometeorites collected from deep-sea sediments of the Indian Ocean of which 175, 180, and 23 are I-type, S-type, and G-type, respectively. Of the 175 I-type spherules, 13 contained platinum group element nuggets (PGNs...

  3. Locked chromophore analogs reveal that photoactive yellow protein regulates biofilm formation in the deep sea bacterium Idiomarina loihiensis

    NARCIS (Netherlands)

    van der Horst, M.A.; Stalcup, T.P.; Kaledhonkar, S.; Kumauchi, M.; Hara, M.; Xie, A.; Hellingwerf, K.J.; Hoff, W.D.

    2009-01-01

    Idiomarina loihiensis is a heterotrophic deep sea bacterium with no known photobiology. We show that light suppresses biofilm formation in this organism. The genome of I. loihiensis encodes a single photoreceptor protein: a homologue of photoactive yellow protein (PYP), a blue light receptor with

  4. Precision-cut liver slices to investigate responsiveness of deep-sea fish to contaminants at high pressure.

    Science.gov (United States)

    Lemaire, Benjamin; Debier, Cathy; Calderon, Pedro Buc; Thomé, Jean Pierre; Stegeman, John; Mork, Jarle; Rees, Jean François

    2012-09-18

    While deep-sea fish accumulate high levels of persistent organic pollutants (POPs), the toxicity associated with this contamination remains unknown. Indeed, the recurrent collection of moribund individuals precludes experimental studies to investigate POP effects in this fauna. We show that precision-cut liver slices (PCLS), an in vitro tool commonly used in human and rodent toxicology, can overcome such limitation. This technology was applied to individuals of the deep-sea grenadier Coryphaenoides rupestris directly upon retrieval from 530-m depth in Trondheimsfjord (Norway). PCLS remained viable and functional for 15 h when maintained in an appropriate culture media at 4 °C. This allowed experimental exposure of liver slices to the model POP 3-methylcholanthrene (3-MC; 25 μM) at levels of hydrostatic pressure mimicking shallow (0.1 megapascal or MPa) and deep-sea (5-15 MPa; representative of 500-1500 m depth) environments. As in shallow water fish, 3-MC induced the transcription of the detoxification enzyme cytochrome P4501A (CYP1A; a biomarker of exposure to POPs). This induction was diminished at elevated pressure, suggesting a limited responsiveness of C. rupestris toward POPs in its native environment. This very first in vitro toxicological investigation on a deep-sea fish opens the route for understanding pollutants effects in this highly exposed fauna.

  5. Dragon kings of the deep sea: marine particles deviate markedly from the common number-size spectrum

    NARCIS (Netherlands)

    Bochdansky, A.B.; Clouse, M.A.; Herndl, G.

    2016-01-01

    Particles are the major vector for the transfer of carbon from the upper ocean to the deep sea. However, little is known about their abundance, composition and role at depths greater than 2000?m. We present the first number-size spectrum of bathy- and abyssopelagic particles to a depth of 5500?m

  6. Impressions of the turbulence variability in a weakly stratified, flat-bottom deep-sea ‘boundary layer’

    NARCIS (Netherlands)

    van Haren, H.

    2015-01-01

    The character of turbulent overturns in a weakly stratified deep-sea is investigated in some detail using 144 high-resolution temperature sensors at 0.7 m intervals, starting 5 m above the bottom. A 9-day, 1 Hz sampled record from the 912 m depth flat-bottom (<0.5% bottom-slope) mooring site in the

  7. Gouge marks on deep-sea mud volcanoes in the eastern Mediterranean: Caused by Cuvier’s beaked whales?

    NARCIS (Netherlands)

    Woodside, J.M.; David, L; Frantzis, A.; Hooker, S.K.

    2006-01-01

    Enigmatic seafloor gouge marks at depths of 1700-2100 m have been observed from submersible during geological survey work studying mud volcanoes in the eastern Mediterranean Sea. The marks consist of a central groove (about 10 cm deep and 1-2 m long), superimposed on a broader bowl-shaped depression

  8. Yearlong moored bioluminescence and current data at KM3NeT neutrino telescope sites in the deep Ionian Sea

    NARCIS (Netherlands)

    van Haren, H.; de Jong, M.; Kooijman, P.

    2015-01-01

    Yearlong observations are presented using stand-alone small optical sensors and current meters in the deep Ionian Sea, E-Mediterranean. At two future neutrino telescope sites, off Sicily (I) and off Peloponessos (Gr), we deployed 2500–3000 m long mooring lines with oceanographic instrumentation. At

  9. Boldness in a deep sea hermit crab to simulated tactile predator attacks is unaffected by ocean acidification

    Science.gov (United States)

    Kim, Tae Won; Barry, James P.

    2016-09-01

    Despite rapidly growing interest in the effects of ocean acidification on marine animals, the ability of deep-sea animals to acclimate or adapt to reduced pH conditions has received little attention. Deep-sea species are generally thought to be less tolerant of environmental variation than shallow-living species because they inhabit relatively stable conditions for nearly all environmental parameters. To explore whether deep-sea hermit crabs ( Pagurus tanneri) can acclimate to ocean acidification over several weeks, we compared behavioral "boldness," measured as time taken to re-emerge from shells after a simulated predatory attack by a toy octopus, under ambient (pH ˜7.6) and expected future (pH ˜7.1) conditions. The boldness measure for crab behavioral responses did not differ between different pH treatments, suggesting that future deep-sea acidification would not influence anti-predatory behavior. However, we did not examine the effects of olfactory cues released by predators that may affect hermit crab behavior and could be influenced by changes in the ocean carbonate system driven by increasing CO2 levels.

  10. Genome sequence of Haloplasma contractile, an unusual contractile bacterium from a deep-sea anoxic brine lake.

    KAUST Repository

    Antunes, Andre

    2011-09-01

    We present the draft genome of Haloplasma contractile, isolated from a deep-sea brine and representing a new order between Firmicutes and Mollicutes. Its complex morphology with contractile protrusions might be strongly influenced by the presence of seven MreB/Mbl homologs, which appears to be the highest copy number ever reported.

  11. Mesonerilla neridae, n. sp. (Nerillidae): First meiofaunal annelid from deep-sea hydrothermal vents

    DEFF Research Database (Denmark)

    Worsaae, Katrine; Rouse, Greg W

    2009-01-01

    Though most common in coastal sandy bottoms, nerillid annelids have been found in a broad variety of habitats around the world and two genera have previously been reported from the deep sea. During a cruise to the southern East Pacific Rise and northern Pacific Antarctic Ridge (near Easter Island...

  12. Genome sequence of Halorhabdus tiamatea, the first archaeon isolated from a deep-sea anoxic brine lake.

    KAUST Repository

    Antunes, Andre; Alam, Intikhab; Bajic, Vladimir B.; Stingl, Ulrich

    2011-01-01

    We present the draft genome of Halorhabdus tiamatea, the first member of the Archaea ever isolated from a deep-sea anoxic brine. Genome comparison with Halorhabdus utahensis revealed some striking differences, including a marked increase in genes associated with transmembrane transport and putative genes for a trehalose synthase and a lactate dehydrogenase.

  13. Enhancement of Immune Activation Activities of Spirulina maxima Grown in Deep-Sea Water

    Science.gov (United States)

    Choi, Woon Yong; Kang, Do Hyung; Lee, Hyeon Yong

    2013-01-01

    In this study, the immuno-modulatory and anticancer activities of marine algae, Spirulina maxima grown in deep-sea water (DSW), were investigated. It was found that the extract of S. maxima, cultured in DSW, effectively suppressed the expression of Bcl2 in A549 cells as well as inhibiting various human cancer cells with concentration dependency, which possibly implies that the extracts may play more important roles in controlling cancer cell growth. The secretion of cytokines IL-6 and TNF-α from human B cells was also greatly increased, compared to those of the extract grown in conventional sea-water. The growth of Human Natural Killer (NK) cells in the presence of the extracts from DSW was significantly higher (12.2 × 104 viable cells/mL) when compared to the control (1.1 × 104 viable cells/mL). Based on HPLC analysis, the increase in the biological activities of the extracts from DSW was caused by considerably high amounts of β-carotene and ascorbic acid because the DSW contained high concentrations and good ratios of several key minerals for biosynthesizing β-carotene and ascorbic acid, as well as maintaining high cell growth. PMID:23743830

  14. Small fractures in deep sea sediments: indicators of pore fluid migration along compaction faults

    International Nuclear Information System (INIS)

    Buckley, D.E.

    1989-01-01

    A long piston core taken from the Southern Nares Abyssal Plain, intersected four fractures in plastic sediments between 17 and 25 m below the sea floor. Faults have been identified from seismic reflection surveys of sediments in this area. The sampled fractures all occurred in oxidized brown clays. Each fracture consisted of a simple plane having apparent dips ranging from 52-63 0 . One fracture had a well developed pale brown alteration halo extending out to 1.5 cm along this plane. Two fractures had no apparent alteration halo, but one fracture appeared to have fine-scale anastomosing features surrounding the main slip plane. Selective chemical tests for labile metal content in sediments surrounding the fractures revealed that about 70% of the reducible manganese, and 40% of the reducible iron had been leached from the sediments in the alteration halo surrounding the fracture plane. These results suggest that reducing pore fluids had migrated along the fracture plane to cause the observed effects. Implications of this study are that compaction faults may act as episodic conduits for vertical advection of pore water during dewatering of unconsolidated sediments. This may be a significant factor to be considered in assessing the effectiveness of deep sea sediment barriers for radioactive waste disposal. (author)

  15. Ecological and evolutionary consequences of benthic community stasis in the very deep sea (>1500 m)

    Science.gov (United States)

    Buzas, Martin A.; Hayek, Lee-Ann C.; Culver, Stephen J.; Hayward, Bruce W.; Osterman, Lisa E.

    2014-01-01

    An enigma of deep-sea biodiversity research is that the abyss with its low productivity and densities appears to have a biodiversity similar to that of shallower depths. This conceptualization of similarity is based mainly on per-sample estimates (point diversity, within-habitat, or α-diversity). Here, we use a measure of between-sample within-community diversity (β1H) to examine benthic foraminiferal diversity between 333 stations within 49 communties from New Zealand, the South Atlantic, the Gulf of Mexico, the Norwegian Sea, and the Arctic. The communities are grouped into two depth categories: 200–1500 m and >1500 m. β1H diversity exhibits no evidence of regional differences. Instead, higher values at shallower depths are observed worldwide. At depths of >1500 m the average β1H is zero, indicating stasis or no biodiversity gradient. The difference in β1H-diversity explains why, despite species richness often being greater per sample at deeper depths, the total number of species is greater at shallower depths. The greater number of communities and higher rate of evolution resulting in shorter species durations at shallower depths is also consistent with higher β1H values.

  16. Lysobacter spongiicola sp. nov., isolated from a deep-sea sponge.

    Science.gov (United States)

    Romanenko, Lyudmila A; Uchino, Masataka; Tanaka, Naoto; Frolova, Galina M; Mikhailov, Valery V

    2008-02-01

    An aerobic, Gram-negative bacterium, strain KMM 329(T), was isolated from a deep-sea sponge specimen from the Philippine Sea and subjected to a polyphasic taxonomic investigation. Comparative 16S rRNA gene sequence analysis showed that strain KMM 329(T) clustered with the species of the genus Lysobacter. The highest level of 16S rRNA gene sequence similarity (97.0 %) was found with respect to Lysobacter concretionis KCTC 12205(T); lower values (96.4-95.2 %) were obtained with respect to the other recognized Lysobacter species. The value for DNA-DNA relatedness between strain KMM 329(T) and L. concretionis KCTC 12205(T) was 47 %. Branched fatty acids 16 : 0 iso, 15 : 0 iso, 11 : 0 iso 3-OH and 17 : 1 iso were found to be predominant. Strain KMM 329(T) had a DNA G+C content of 69.0 mol%. On the basis of the phenotypic, chemotaxonomic, DNA-DNA hybridization and phylogenetic data, strain KMM 329(T) represents a novel species of the genus Lysobacter, for which the name Lysobacter spongiicola sp. nov. is proposed. The type strain is KMM 329(T) (=NRIC 0728(T) =JCM 14760(T)).

  17. Particle mixing processes of Chernobyl fallout in deep Norwegian Sea sediments: Evidence for seasonal effects

    Science.gov (United States)

    Balzer, W.

    1996-09-01

    A 1430 m deep station in the Norwegian Sea (Voering Plateau) was occupied five times between May 1986 and February 1987 to investigate the seasonal variation in sediment mixing rates. Cherbnbyl-derived radiocesium, identified by its high proportion of short-lived 134Cs, was used as a tracer for mixing. Most of the nuclide input arrived at the sediment within a narrow time span in June/early July during the beginning of the seasonal biogenic sedimentation pulse. Measured 137Cs profiles in the sediment over time were compared with modelled distributions calculated with a finite difference scheme. The input function of radiocesium to the sea floor was evaluated from the increase of the total inventory with time. Time-invariant mixing coefficients did not provide reasonable fits to either summer or winter distributions. The best fit was obtained with a rate of mixing proportional to the radiocesium input flux, with an average enhancement factor of 6.6 during the two summer months. It appears that the benthic macrofauna are more active during the food supply season and rapidly ingest/bury freshly sedimented materials.

  18. Mollusca from a species-rich deep-water Leptometra community in the Alboran Sea

    Directory of Open Access Journals (Sweden)

    Serge Gofas

    2014-12-01

    Full Text Available An exceptional species richness for Mollusca was found on Avempace bank (349-365 m, Djibouti group, Alboran Sea, where the most abundant species was the crinoid Leptometra phalangium. A sample of sediment sieved on a 0.5-mm mesh yielded 156 species of molluscs (83 live-taken, 1772 specimens with a high Shannon-Wiener diversity index (H’(log2=3.60. The dominant mollusc was Limopsis aurita and the six most common species accounted for 77% of the specimens. On the other hand, 42 species were represented by only one or two specimens. Two species are described as new, three more are first findings in the Mediterranean and two are first findings in Iberian waters. One-third of the species have not been reported from the neighbouring, well-explored Alboran Island platform. There is a considerable balance between the trophic groups, denoting a stable and structured community. Most of the species have an extensive Atlantic range, and most have a planktonic larval stage. Therefore, it can be hypothesized that the fauna benefits from a diverse influx of larvae carried in by the more superficial incoming Atlantic current. Because of its exceptional richness, this type of bathyal community with Leptometra and Limopsis should be considered a high priority for habitat conservation in the Mediterranean deep sea.

  19. Long-term measurements of acoustic background noise in very deep sea

    International Nuclear Information System (INIS)

    Riccobene, G.

    2009-01-01

    The NEMO (NEutrino Mediterranean Observatory) Collaboration installed, 25 km E offshore the port of Catania (Sicily) at 2000 m depth, an underwater laboratory to perform long-term tests of prototypes and new technologies for an underwater high energy neutrino km 3 -scale detector in the Mediterranean Sea. In this framework the Collaboration deployed and successfully operated for about two years, starting from January 2005, an experimental apparatus for on-line monitoring of deep-sea noise. The station was equipped with four hydrophones and it is operational in the range 30 Hz-43 kHz. This interval of frequencies matches the range suitable for the proposed acoustic detection technique of high energy neutrinos. Hydrophone signals were digitized underwater at 96 kHz sampling frequency and 24 bits resolution. The stored data library, consisting of more than 2000 h of recordings, is a unique tool to model underwater acoustic noise at large depth, to characterize its variations as a function of environmental parameters, biological sources and human activities (ship traffic, etc.), and to determine the presence of cetaceans in the area.

  20. Nitrogen Fixation By Sulfate-Reducing Bacteria in Coastal and Deep-Sea Sediments

    Science.gov (United States)

    Bertics, V. J.; Löscher, C.; Salonen, I.; Schmitz-Streit, R.; Lavik, G.; Kuypers, M. M.; Treude, T.

    2011-12-01

    Sulfate-reducing bacteria (SRB) can greatly impact benthic nitrogen (N) cycling, by for instance inhibiting coupled denitrification-nitrification through the production of sulfide or by increasing the availability of fixed N in the sediment via dinitrogen (N2)-fixation. Here, we explored several coastal and deep-sea benthic habitats within the Atlantic Ocean and Baltic Sea, for the occurrence of N2-fixation mediated by SRB. A combination of different methods including microbial rate measurements of N2-fixation and sulfate reduction, geochemical analyses (porewater nutrient profiles, mass spectrometry), and molecular analyses (CARD-FISH, HISH-SIMS, "nested" PCR, and QPCR) were applied to quantify and identify the responsible processes and organisms, respectively. Furthermore, we looked deeper into the question of whether the observed nitrogenase activity was associated with the final incorporation of N into microbial biomass or whether the enzyme activity served another purpose. At the AGU Fall Meeting, we will present and compare data from numerous stations with different water depths, temperatures, and latitudes, as well as differences in key geochemical parameters, such as organic carbon content and oxygen availability. Current metabolic and molecular data indicate that N2-fixation is occurring in many of these benthic environments and that a large part of this activity may linked to SRB.