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Sample records for cultivated rice varieties

  1. Effect of fluoride on photosynthesis, growth and accumulation of four widely cultivated rice (Oryza sativa L.) varieties in India.

    Science.gov (United States)

    Mondal, Naba Kumar

    2017-10-01

    Long-term use of fluoride contaminated groundwater to irrigate crops; especially paddy rice (Oryza sativa L.) has resulted in elevated soil fluoride levels in Eastern India. There is, therefore, growing concern regarding accumulation of fluoride in rice grown on these soils. A laboratory experiment was conducted to investigate the effect of F on germination and phytotoxicity of four varieties of rice (Orzya sativa L.) (MTU-1010; IET-4094; IET-4786 and GB-1) grown in petri dish in a green house with inorganic sodium fluoride (NaF). Three different levels (0, 5, 10 and 20mg/L) of NaF solution were applied. At the end of the experiment (28 days), biochemical analysis (pigment, sugar, protein, amino acid and phenol), lipid peroxidation, root ion leakage and catalase activity along with fluoride accumulation and fresh and dry weight of roots and shoots of four cultivars were measured. The results revealed that all the four studied varieties exhibited gradual decrease of germination pattern with increasing concentration of F. Pigment and growth morphological study clearly demonstrated that the variety IET-4094 was the least influenced by F compare to the other three varieties of rice. The translocation factor (TF) was recorded to be the highest for variety IET-4786 (0.215 ± 0.03) at 5mg/L F concentration. All the four varieties showed higher level of fluoride accumulation in root than in shoot. Variable results were recorded for biochemical parameters and lipid peroxidation. Catalase activity and relative conductivity (root ion leakage) gradually increased with increasing F concentration for all the four varieties. It is speculated that fluoride accumulation in rice straw at very high levels will affect the feeding cattle and such contaminated straw could be a direct threat to their health and also, indirectly, to human health via presumably contaminated meat and milk. Copyright © 2017. Published by Elsevier Inc.

  2. Hybridization study of wild rice Oryza glumaepatula with varieties of cultivated rice (O. sativa) and wild (O. grandiglumis)

    International Nuclear Information System (INIS)

    Villalobos Cascante, Eddier

    2015-01-01

    The process of interspecific hybridization of the wild species O. glumaepatula is studied with commercial varieties of the species O. sativa and O. grandiglumis, by morphological evaluation and hybrid flow cytometry. Hybrid plants were evaluated of cross between O. glumaepatula, located in the wetlands of Rio Medio Queso and two varieties of O. sativa, Puita Inta and CFX 18 resistant to a herbicide. The technique of Polymerase Chain Reaction Allele Specifies Oligonucleotide (PCR-ASO) was used to detect allelic mutations in the ALS gene conferring herbicide resistance, and it is confirmed the hybrid nature of the plants obtained at crossings. 68 hybrids were obtained: O. glumaepatula x P. Inta, 21 hybrids P. Inta x O. glumaepatula, 4 hybrids O. glumaepatula x CFX-18 and 15 hybrids CFX-18 x O. glumaepatula. 10 morphological descriptors of the genus Oryza were evaluated and determined that are indifferent to the direction and type of crossing, the hybrids resemble to the wild species O. glumaepatula for characters: height, panicle length and ligule length. All hybrids have showed similarity to commercial varieties in flag leaf length. Other characters evaluated in the hybrids have presented maternal effect, heterosis and intermediate values. The protocol of flow cytometry (FCM) is standardized species for Oryza genus analyzing nuclear DNA content of 106 samples of leaf tissue of wild species O. glumaepatula, O. grandiglumis; whose average has been of 0.73 picograms, and natural hybrids product of the cross of these species. The result has been intermediate compared with O. grandiglumis and O. glumaepatula that have made available to 1.0 picograms and 0.50 of DNA respectively. The molecular nature of the hybrids was confirmed in this way. (author) [es

  3. Free and bound phenolic profiles and antioxidant activity of milled fractions of different indica rice varieties cultivated in southern China.

    Science.gov (United States)

    Ti, Huihui; Li, Qing; Zhang, Ruifen; Zhang, Mingwei; Deng, Yuanyuan; Wei, Zhencheng; Chi, Jianwei; Zhang, Yan

    2014-09-15

    This study quantified free and bound phytochemicals and their antioxidant activity in the endosperm and bran/embryo of different indica rice varieties. Phytochemicals mainly existed as free form in the bran/embryo and as both free and bound forms in the endosperm. The average values of total phenolic content, flavonoid content, FRAP, ABTS and ORAC values in the bran/embryo were 3.1, 10.4, 8.2, 11.2 and 11.4 times higher than those in the endosperm, respectively. In whole brown rice, the bran contributed 59.2%, 53.7%, 47.7%, 55.5% and 56.9% of total phenolics, flavonoids, FRAP, ABTS and ORAC values, respectively. Seven individual phenolics (gallic, protocatechuic, chlorogenic, caffeic, syringic, coumaric and ferulic acids) were detected with most coumaric and ferulic acids in the bran. All measurements exhibited varietal differences. These findings provide important information for improving human health by encouraging the consumption of whole brown rice and its use in food product development. Copyright © 2014 Elsevier Ltd. All rights reserved.

  4. Marker-assisted introgression of broad-spectrum blast resistance genes into the cultivated MR219 rice variety.

    Science.gov (United States)

    Miah, Gous; Rafii, Mohd Y; Ismail, Mohd R; Puteh, Adam B; Rahim, Harun A; Latif, Mohammad A

    2017-07-01

    The rice cultivar MR219 is famous for its better yield and long and fine grain quality; however, it is susceptible to blast disease. The main objective of this study was to introgress blast resistance genes into MR219 through marker-assisted selection (MAS). The rice cultivar MR219 was used as the recurrent parent, and Pongsu Seribu 1 was used as the donor. Marker-assisted foreground selection was performed using RM6836 and RM8225 to identify plants possessing blast resistance genes. Seventy microsatellite markers were used to estimate recurrent parent genome (RPG) recovery. Our analysis led to the development of 13 improved blast resistant lines with Piz, Pi2 and Pi9 broad-spectrum blast resistance genes and an MR219 genetic background. The RPG recovery of the selected improved lines was up to 97.70% with an average value of 95.98%. Selected improved lines showed a resistance response against the most virulent blast pathogen pathotype, P7.2. The selected improved lines did not express any negative effect on agronomic traits in comparison with MR219. The research findings of this study will be a conducive approach for the application of different molecular techniques that may result in accelerating the development of new disease-resistant rice varieties, which in turn will match rising demand and food security worldwide. © 2016 Society of Chemical Industry. © 2016 Society of Chemical Industry.

  5. Promising mutant variety of rice evolved through gamma irradiation

    International Nuclear Information System (INIS)

    Prasad, S.C.; Sinha, S.K.

    1980-01-01

    Rice occupies a major share in crop production in the Chotanagpur plateau of Bihar State. Uplands are roughly 40% in area where traditional low yielding rice, known as ''gora'' is cultivated as directly sown crop. Despite introduction of high yielding rice varieties, gora group of rices continue to prevail. It is therefore desired to increase the productivity level of the gora rice by mutation breeding. One such mutant known as ''gora mutant'' was obtained through gamma irradiation (10 kR) of variety Brown gora. The maturity of both parent and mutant remaining constant (ie. 100 days), there is some improvement in other characteristics like plant height, tillering capacity and kernel character. The parent being tall, shy in tillering and red bold kernel, the mutant has dwarfish characteristics, profuse tillering habit and white kernel with fine grains. The yielding capacity of mutant derivative is 30-40% higher than the parent Brown gora. This variety is in pre-release stage, and the farmers have taken great liking for it. (author)

  6. Semi-dwarf rice varieties in the United States

    International Nuclear Information System (INIS)

    1987-01-01

    Semi-dwarf rice varieties are grown extensively in California and are beginning to be adopted in the northern United States. Their background is varied. Some derive their semi-dwarf status from Asian ancestors. Use has been made of TN-1, IR8, IR659-10-8-3 and IR1318 (containing TN1). Other semi-dwarfs in California derive their short stature from induced mutants. The principal parent is Calrose 76 derived from an induced mutation in Calrose (released in 1976). The first US semi-dwarf variety was LA 110, developed at the Rice Experiment Station at Crowley, Louisiana from a cross TN-I x M4 (from Sri Lanka) released in 1974. The next group of semidwarf varieties was developed in cooperation between the California Coop. Rice Research Foundation, The California Agricultural Experiment Station and the USDA Agric. Research Service. These are listed. Semidwarf long grain varieties were developed in Texas: Bellemont (1981) and Lemont (1983), both using IR659-10-8-3 as source of semidwarf culm. Two other long grain varieties Leah (1982) and Toro-2 (1984) released by the Rice Research Station in Crowley, Louisiana, derive their short stature form C19902, a line developed at Crowley, but still reaching a height of 89-94 cm. There are other short statured varieties in the US which are not truly semidwarfs, such as Bond and Newbonnet in Arkansas, Skybonnet and Pecos in Texas. The general trend is towards shorter varieties. Calrose 76 and M7 are being replaced. M-201 and L-202 are the shortest and have excellent lodging resistance. Their background is IR8 or TN1. Too short varieties like Bellemont may have seedling emergence problems. The area of cultivated varieties can only be estimated based upon seed production. According to such estimates, total rice area in California 1984 was 184,100 ha, of which 178,100 (ca. 97%) were under semidwarf varieties. The total rice area in the US 1984 was 1.139,000 ha, of which 249,500 ha or 21,9% were under semidwarf varieties. The rice

  7. Identification of Striga hermonthica-Resistant Upland Rice Varieties in Sudan and Their Resistance Phenotypes

    OpenAIRE

    Samejima, Hiroaki; Babiker, Abdel G.; Mustafa, Ahmed; Sugimoto, Yukihiro

    2016-01-01

    Rice has become a major staple cereal in sub-Saharan Africa. Currently, upland rice cultivation is expanding particularly in rainfed areas where the root parasitic weed Striga hermonthica, a major constraint to cereal production, is endemic. Laboratory, pot, and semi-controlled open air experiments were performed to evaluate resistance of selected rice varieties in Sudan to a resident S. hermonthica population. In the laboratory, 27 varieties were screened for post-attachment resistance using...

  8. Allelopathic potential of selected rice varieties

    African Journals Online (AJOL)

    ajl10

    2012-11-01

    Nov 1, 2012 ... 1Faculty of Agro Based Industry, Universiti Malaysia Kelantan, 17600 Jeli, Kelantan, Malaysia. ... experiment was laid out in completely randomized design. ..... Mixed-Cultures. PLoS ONE 7(5):e37201. Islam M (2010). Allelopathic effects of rice varieties on seed germination and seedling growth of lettuce.

  9. Tocopherol and tocotrienol contents of different varieties of rice in Malaysia.

    Science.gov (United States)

    Shammugasamy, Balakrishnan; Ramakrishnan, Yogeshini; Ghazali, Hasanah M; Muhammad, Kharidah

    2015-03-15

    The present study examined the contents of tocopherols and tocotrienols and their distribution in 58 different varieties of whole rice cultivated in Malaysia. The analytical method used was saponification of samples followed by dispersive liquid-liquid microextraction and reverse phase high-performance liquid chromatography. The total vitamin E contents of different varieties of whole rice ranged between 19.36 and 63.29 mg kg⁻¹. Contents of vitamin E isomers varied among rice varieties both within and between grain color groups. Black-pigmented rice showed significantly higher mean contents of α-tocopherol, β-tocopherol and α-tocotrienol than non-pigmented rice and red-pigmented rice. Red-pigmented rice had significantly lower mean contents of γ-tocotrienol and total vitamin E than non-pigmented rice. The mean contents of δ-tocotrienol and total vitamin E in non-pigmented rice, however, were similar to those in black-pigmented rice. γ-Tocotrienol was the predominant form of vitamin E isomer in all analyzed varieties. The Pearson correlations among vitamin E isomers and total vitamin E content of whole rice were also studied. This study provides information on vitamin E content of different rice varieties that would be beneficial for decision making in genetic breeding of bioactive compound-rich rice varieties. © 2014 Society of Chemical Industry.

  10. Less adaption of newly approved variety Basmati 515 among aromatic basmati rice varieties in Kallar Tract of Punjab, Pakistan

    Directory of Open Access Journals (Sweden)

    Muhammad Tahir Latif

    2017-12-01

    Full Text Available A field survey was conducted after harvesting of rice crop 2016 to identify the reasons for less adaption of aromatic rice variety Basmati 515. The rice growers adopting rice-wheat cropping pattern in kallar tract were included in population of research study. Thirty male farmers from each selected district making a total of 180 respondent farmers were interviewed by convenience sampling method. The survey findings showed that the aromatic rice variety Basmati 515 was cultivated on only 2.7% rice area while maximum area (47.3% was under Super basmati variety. The comparison of Basmati 515 was made with Super basmati and PS 2 due to comparatively more cultivated area and declared yield potential of these varieties. Overall the farmers were applying under dosed phosphorus fertilizer (DAP as 0.25, 0.20 and 0.22 bag ha-1 respectively for basmati 515, super basmati and PS-2 varieties. The descriptive analysis showed that the less adaptability of basmati 515 was due to less yield and more attacks of borer (11%, BLB (10% and leaf roller (3.25% in comparison to other aromatic and fine rice varieties. Similarly maximum lodging (16% was recorded on basmati 515. Maximum yield was estimated for PS 2 variety (4.7 t ha-1 followed by super basmati (4.0 t ha-1 and basmati 515 (3.78 t ha-1. The market price of super basmati was still higher due to its natural aroma, long & thin grain and export demand. The research institutes should focus for development of new aromatic high yielding and more qualitative rice varieties to increase the rice production and export.

  11. Rice varieties in relation to rice bread quality.

    Science.gov (United States)

    Han, Hye Min; Cho, Jun Hyeon; Kang, Hang Won; Koh, Bong Kyung

    2012-05-01

    It is difficult to predict rice bread quality only from the amylose content (AC) or dough characteristics of new lines produced by rice breeding programmes. This study investigated the AC relative to bread baking quality of rice varieties developed in Korea, and identified specific characteristics that contribute to rice bread quality. Manmibyeo, Jinsumi, Seolgaeng and Hanareumbyeo were classified as low AC, YR24088 Acp9, Suweon517, Chenmaai and Goamibyeo as intermediate AC and Milyang261 as high AC. Suweon517, Milyang261 and Manmibyeo had a high water absorption index (WAI), while Goamibyeo, YR24088 Acp9, Jinsumi, Seolgaeng, Hanareumbyeo and Chenmaai had a low WAI. The gelatinisation enthalpy of flour varied from 9.2 J g(-1) in Milyang261 to 14.8 J g(-1) in YR24088 Acp9. After 7 days of storage the rate of flour retrogradation and crumb firmness were weakly correlated, with the exception of Jinsumi. Bread volumes of Jinsumi, Chenmaai, YR24088 Acp9 and Goamibyeo were comparable to that of wheat flour, but the rest were unsuited to bread making because of their low volume and hard crumb texture. Based on volume, texture and crumb firmness ratio, Chenmaai and Goamibyeo were the most appropriate varieties for making bread. An intermediate AC and low WAI were the primary indicators of rice bread flour quality. Copyright © 2011 Society of Chemical Industry.

  12. Response of high yielding rice varieties to NaCl salinity in ...

    African Journals Online (AJOL)

    In order to find resistant varieties and study the reaction of some newly released high yielding varieties to different levels of salinity of irrigation water an experiment was conducted at the Rice Research Institute of Iran-Amol station in a greenhouse. Eight varieties, cultivated in pots, were tested with three levels of salinity (2, ...

  13. Irradiation with protons in order to obtain new rice varieties

    International Nuclear Information System (INIS)

    Gonzalez, Maria C.; Cristo, Elizabeth; Fuentes, Jorge L.

    2001-01-01

    In the Laboratory of Genetics and Improvement of the National Institute of Agricultural Sciences was developed a Program of Genetic Improvement using Biotechnical and Nuclear Techniques in order to obtain new rice varieties of high yield potential under drought stress condition. For them different explants types were used starting from seeds of the Cuban variety of rice Amistad 82 irradiated with protons in dose of 10, 20, 30, 40, 50, 60, 70, 80, 90 and 100 Gy. The explants were cultivated in vitro in order to obtaining callus and later plant regenerate. The plant selected in vitro was multiplied being carried out several selection cycles under field conditions. A remarkable stimulation was observed from the regeneration of plants when using dose of 20 Gy and it was possible to select 4 promising lines that differ of the donor as for cycle, architecture of the plant and tolerance to drought. Tjis result demonstrates the potentialities of this radiation source for obtaining of new rice varieties

  14. The yield and quality of black rice varieties in different altitude

    Science.gov (United States)

    Purwanto, E.; Hidayati, W.; Nandariyah

    2018-03-01

    This study aims to determine the optimal environmental conditions and corresponding black rice varieties in order to produce high production and optimum quality rice. The study using nested design, first was location (2 levels: the highlands and lowland), second was varieties (3 levels: Cempo Ireng, IPB, and Gagak) the study was conducted from November 2015 until May 2016 in Karanglo and Gutanon village, Karanganyar. Anthocyanin analysis conducted in laboratory of Nutrition and Food, Faculty of Agriculture, Sebelas Maret University. Data were analyzed using analysis of variance and significant difference continued with DMRT (Duncan Multiple Range Test) level of 5%. Results showed that cultivation in highlands and use of diverse varieties showed different quantity of rice that can be seen on panicle length, and weight of grain crops. Improved quality of results showed same things, anthocyanin content and iron increased on black rice which cultivated in highlands.

  15. Physical and Chemical Properties of Some Selected Rice Varieties

    African Journals Online (AJOL)

    User

    Physical and chemical properties of nine rice varieties grown and processed in Ebonyi .... Therefore, one tonne of a slender variety of rice will need more storage space than the ..... during washing and boiling of milled rice Starch 36:386-390.

  16. Improvement of traditional local rice varieties through induced mutations using nuclear techniques

    International Nuclear Information System (INIS)

    Pham Van Ro; Do Huu At

    2001-01-01

    'Improvement of local rice varieties for high yield, resistance to disease and insect pests (brown plant hopper and rice blast) and export quality through induced mutations for the Mekong Delta' started in 1993. After six years, it showed effecting on the field in the MD as well as at the south of Vietnam. TNDB-100 manifest very wide adaptation and yield stable variety. THDB is suitable for deepwater rice region, coastal area, where rice cultivation effected by acid sulphate and salinity conditions. Both varieties are good example for the method. Thank to good Co-operation from extension center from provinces, hundred classes of extension were organized to recommend to the farmers. And thank to the strongly supporting from IAEA so that nearly 400,000 ha of TNDB-100 occupied at the south of Vietnam as well as nearly 15,000 ha of THDB grown in the coastal as well as rainfed lowland rice areas at the South of Vietnam. To continue the rice improvement by this technique, seeds of six traditional local varieties were exposed under different dose of gamma rays to create new mutants. At present day hundred improved breeding lines were selected, a dozen of uniform lines were isolated and entranced the yield trail as well as regional testing program. From these improved varieties would be selected to contribute to the rice cultivation at the south of Vietnam in the next years. (author)

  17. Improvement of traditional local rice varieties through induced mutations using nuclear techniques

    Energy Technology Data Exchange (ETDEWEB)

    Pham Van Ro; Do Huu At [Cuu Long Delta Rice Research Institute (Viet Nam)

    2001-03-01

    'Improvement of local rice varieties for high yield, resistance to disease and insect pests (brown plant hopper and rice blast) and export quality through induced mutations for the Mekong Delta' started in 1993. After six years, it showed effecting on the field in the MD as well as at the south of Vietnam. TNDB-100 manifest very wide adaptation and yield stable variety. THDB is suitable for deepwater rice region, coastal area, where rice cultivation effected by acid sulphate and salinity conditions. Both varieties are good example for the method. Thank to good Co-operation from extension center from provinces, hundred classes of extension were organized to recommend to the farmers. And thank to the strongly supporting from IAEA so that nearly 400,000 ha of TNDB-100 occupied at the south of Vietnam as well as nearly 15,000 ha of THDB grown in the coastal as well as rainfed lowland rice areas at the South of Vietnam. To continue the rice improvement by this technique, seeds of six traditional local varieties were exposed under different dose of gamma rays to create new mutants. At present day hundred improved breeding lines were selected, a dozen of uniform lines were isolated and entranced the yield trail as well as regional testing program. From these improved varieties would be selected to contribute to the rice cultivation at the south of Vietnam in the next years. (author)

  18. DIFFUSION AND ADOPTION OF NEW RICE VARIETIES FOR AFRICA

    African Journals Online (AJOL)

    Prof. Adipala Ekwamu

    Saharan Africa (SSA). It is ranked ... cultivated, rice is the most rapidly growing food .... population. Another parameter of interest is the average treatment effect on the treated, commonly denoted as ATE1 or ATT (Wooldridge, 2002, chapter 18).

  19. Rice Varieties in Archaic East Asia: Reduction of Its Diversity from Past to Present Times.

    Science.gov (United States)

    Kumagai, Masahiko; Kanehara, Masaaki; Shoda, Shin'ya; Fujita, Saburo; Onuki, Shizuo; Ueda, Shintaroh; Wang, Li

    2016-10-01

    The Asian cultivated rice, Oryza sativa, is one of the most important crops feeding more than a third of global population. In spite of the studies for several decades, the origin and domestication history of rice varietal groups, japonica and indica, have not been fully unveiled. Genetic information of ancient rice remains is essential for direct and exclusive insight into the domestication history of rice. We performed ancient DNA analysis of 950- to 2,800-year-old rice remains excavated from Japan and Korea. We found the presence of both japonica- and indica-type varieties in the Yayoi period and the middle ages of Japan and the middle part of Korea Peninsula 2,000 years ago. It is popularly considered that japonica has been exclusively cultivated in northern part of East Asia including Japan and Korea. Our result disclosed unexpectedly wide diversity of rice varieties in archaic East Asia. The present results from ancient rice DNA reveal an exclusive insight for the domestication history of rice which is not provided as far as contemporary rice. © The Author 2016. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  20. A comparative study of competitiveness between different genotypes of weedy rice (Oryza sativa) and cultivated rice.

    Science.gov (United States)

    Dai, Lei; Dai, Weimin; Song, Xiaoling; Lu, Baorong; Qiang, Sheng

    2014-01-01

    Competition from weedy rice can cause serious yield losses to cultivated rice. However, key traits that facilitate competitiveness are still not well understood. To explore the mechanisms behind the strong growth and competitive ability, replacement series experiments were established with six genotypes of weedy rice from different regions and one cultivated rice cultivar. (1) Weedy rice from southern China had the greatest impact on growth and yield of cultivated rice throughout the entire growing season. Weedy rice from the northeast was very competitive during the early vegetative stage while the competitive effects of eastern weedy rice were more detrimental at later crop-growth stages. (2) As the proportion of weedy rice increased, plant height, tillers, above-ground biomass, and yield of cultivated rice significantly declined; the crop always being at disadvantage regardless of proportion. (3) Weedy biotypes with greater diversity as estimated by their Shannon indexes were more detrimental to the growth and yield of cultivated rice. Geographic origin (latitude) of weedy rice biotype, its mixture proportion under competition with the crop and its genetic diversity are determinant factors of the outcome of competition and the associated decline in the rice crop yield. © 2013 Society of Chemical Industry. © 2013 Society of Chemical Industry.

  1. An early maturing rice mutant released as a variety

    International Nuclear Information System (INIS)

    Azam, M.A.; Imtiaz Uddin, Md.

    2001-01-01

    In the content of food grain production deficiency (about 1.0-1.5 million tons of rice per year according to the Bangladesh Bureau of Statistics, 1998) an induced mutation programme was undertaken in 1985. One moderate early maturing and high yielding rice mutant line (BINA6-84-4-115) has been developed by irradiating F 2 seeds of the cross 'BR4' x 'Iratom 38'. Three treatments viz., 250, 300 and 350 Gy were given to the F 2 seeds. Finally, this line was selected in M 6 generation for advanced yield trial. The line was evaluated in comparative trials with another mutant line BINA6-84-4-163. These two mutant lines had been selected earlier from 300 Gy originated lines. The two check varieties, 'BR 11' and 'BR 22' were also included in the trial, which was conducted in two consecutive T. aman seasons (July to December) during 1994 and 1995 at five locations in Bangladesh. From the results, it was evident that the mutant BINA6-84-4-115 did not differ much with the other mutant lines or check varieties in respect to plant height, number of effective tillers and panicle length but it was 10-18 days earlier than the other 3 entries. It produced a similar yield as the check BR 11 in 1994 and a higher yield than the check BR 11 and BR 22 in 1995. This mutant line gave the highest yield per day among all the entries. In addition to this, the grains are long, fine and possess a high L/B ratio, which are of high commercial value. This line has been released by the National Seed Board of Bangladesh in 1998 as a commercial variety under the name 'BINADHAN-4' for cultivation throughout Bangladesh

  2. Effect Of Shade Organic Materials And Varieties On Growth And Production Of Upland Rice

    Directory of Open Access Journals (Sweden)

    Jonatan Ginting

    2015-01-01

    Full Text Available Abstract There is a shade factor and low organic matter content of the soil is a problem that needs to be addressed in the development of upland rice cultivation as intercrops in the plantation area. Based on these considerations then one study that needs to be done is to conduct experiments on the effect of shade factor combined with the the provision of the organic material to the some varieties of upland rice that has been recommended nationally. The objective of experiment is to study the influence of shade organic materials and varieties on the growth and production of upland rice. This research using experimental design of Split - Split Plot Design with 3 treatment factors and 3 replications or blocks. The first factor is the treatment of shade with 3 levels shade percentage 0 20 and 40. The second factor is the dosage of organic material consists of 3 levels 0 g polybag 25 g polybag 50 g polybag and 75 g polybag. The third factor is the treatment of varieties consists of 4 types of upland rice varieties Si Kembiri Situ Patengggang Situ Bagendit and Tuwoti. The research results showed that the effect of shade on upland rice varieties decrease number of tillers number of panicles number of productive grains grain production per hill of uplnd rice plants and total sugar content of upland rice plants. Effect of organic matter increases number of panicles number of productive grains grain production per hill of upland rice plants and total sugar content of upland rice plants. It is known that the the variety of Situ Patenggang provides better growth and production compared with three other varieties Si Kembiri Situ Bagendit and Tuwoti in shaded conditions.

  3. Genetic relatedness among indigenous rice varieties in the Eastern Himalayan region based on nucleotide sequences of the Waxy gene.

    Science.gov (United States)

    Choudhury, Baharul I; Khan, Mohammed L; Dayanandan, Selvadurai

    2014-12-29

    Indigenous rice varieties in the Eastern Himalayan region of Northeast India are traditionally classified into sali, boro and jum ecotypes based on geographical locality and the season of cultivation. In this study, we used DNA sequence data from the Waxy (Wx) gene to infer the genetic relatedness among indigenous rice varieties in Northeast India and to assess the genetic distinctiveness of ecotypes. The results of all three analyses (Bayesian, Maximum Parsimony and Neighbor Joining) were congruent and revealed two genetically distinct clusters of rice varieties in the region. The large group comprised several varieties of sali and boro ecotypes, and all agronomically improved varieties. The small group consisted of only traditionally cultivated indigenous rice varieties, which included one boro, few sali and all jum varieties. The fixation index analysis revealed a very low level of differentiation between sali and boro (F(ST) = 0.005), moderate differentiation between sali and jum (F(ST) = 0.108) and high differentiation between jum and boro (F(ST) = 0.230) ecotypes. The genetic relatedness analyses revealed that sali, boro and jum ecotypes are genetically heterogeneous, and the current classification based on cultivation type is not congruent with the genetic background of rice varieties. Indigenous rice varieties chosen from genetically distinct clusters could be used in breeding programs to improve genetic gain through heterosis, while maintaining high genetic diversity.

  4. Rice improvement through radiation-induced mutation for cultivation in South Vietnam

    International Nuclear Information System (INIS)

    Do Khac Thinh; Hung Phi Oanh; Nguyen Thi Cuc; Nguyen Ngoc Quynh

    2001-01-01

    For past years, rice varieties cultivated in South Vietnam originated from domestic hybridisation or from IRRI. Rice mutation breeding has been initiated for recent years. To meet the requirement of rice production diversification in different agro-ecological areas and rice genetic resources, from 1993 Institute of Agricultural Science of South Vietnam has carried out rice improvement by induced mutation of radiation. The mutagen was gamma rays of 60 Co. The goal is to create inherited variations, which cannot be obtained from other breeding methods, specially important characters of rice varieties (high tolerance to acid sulfate soil, lodging resistance combined with early maturity), which were difficult to gain by hybridisation. With 60 Co gamma rays, doses of 10-20 krad, dose rate of 280 krad/h, dry and germinated seeds of introduced and local rice varieties (IR 64, IR 9729, IR 50404, IR 59606, Jasmine 85, Nang Huong, Tam Xoan) were irradiated. The irradiated seeds were immediately sown within 24 and 94 hrs for wet seeds and dry seeds after treatment, respectively. Population of 10,000-15,000 plants were established and evaluated by IRRI evaluation standard from M2-M7 generations. 365 lines, varieties were selected with better behaviours than original varieties as lodging resistance, earliness, potential yield, leaf characters, tolerant ability to adverse conditions etc. Some good varieties (VND95-19, VND95-20) have been approved as leading national varieties and released for large-scale production in South Vietnam. (author)

  5. Rice improvement through radiation-induced mutation for cultivation in South Vietnam

    Energy Technology Data Exchange (ETDEWEB)

    Do Khac Thinh; Hung Phi Oanh; Nguyen Thi Cuc; Nguyen Ngoc Quynh [Institute of Agricultural Science of South Vietnam, Ho Chi Minh (Viet Nam)

    2001-03-01

    For past years, rice varieties cultivated in South Vietnam originated from domestic hybridisation or from IRRI. Rice mutation breeding has been initiated for recent years. To meet the requirement of rice production diversification in different agro-ecological areas and rice genetic resources, from 1993 Institute of Agricultural Science of South Vietnam has carried out rice improvement by induced mutation of radiation. The mutagen was gamma rays of {sup 60}Co. The goal is to create inherited variations, which cannot be obtained from other breeding methods, specially important characters of rice varieties (high tolerance to acid sulfate soil, lodging resistance combined with early maturity), which were difficult to gain by hybridisation. With {sup 60}Co gamma rays, doses of 10-20 krad, dose rate of 280 krad/h, dry and germinated seeds of introduced and local rice varieties (IR 64, IR 9729, IR 50404, IR 59606, Jasmine 85, Nang Huong, Tam Xoan) were irradiated. The irradiated seeds were immediately sown within 24 and 94 hrs for wet seeds and dry seeds after treatment, respectively. Population of 10,000-15,000 plants were established and evaluated by IRRI evaluation standard from M2-M7 generations. 365 lines, varieties were selected with better behaviours than original varieties as lodging resistance, earliness, potential yield, leaf characters, tolerant ability to adverse conditions etc. Some good varieties (VND95-19, VND95-20) have been approved as leading national varieties and released for large-scale production in South Vietnam. (author)

  6. Farmers' perception of risk in cultivating hybrid rice in Bangladesh ...

    African Journals Online (AJOL)

    Although there is an enormous potential for improving adoption of hybrid rice in Bangladesh, it is going through some difficulties in practice. Understanding farmers' perception about difficulties is critical to successful promotion. The present study was conducted to analyze farmers' perception of risk in cultivating hybrid rice ...

  7. Leaf development of cultivated rice and weedy red rice under elevated temperature scenarios

    OpenAIRE

    Streck,Nereu A.; Uhlmann,Lilian O.; Gabriel,Luana F.

    2013-01-01

    The objective of this study was to simulate leaf development of cultivated rice genotypes and weedy red rice biotypes in climate change scenarios at Santa Maria, RS, Brazil. A leaf appearance (LAR) model adapted for rice was used to simulate the accumulated leaf number, represented by the Haun Stage, from crop emergence to flag leaf appearance (EM-FL). Three cultivated rice genotypes and two weedy red rice biotypes in six emergence dates were used. The LAR model was run for each emergence dat...

  8. Application of Azolla and intermittent irrigation to improve the productivity and nutrient contents of local black rice variety

    Science.gov (United States)

    Sulandjari; Yunindanova, M. B.

    2018-03-01

    Black rice is a local rice variety that contains a high level of anthocyanin pigment. Anthocyanin has been reported to be very effective in reducing cholesterol levels as well as cancer cell invasion. One of the main problems in rice cultivation is lack of water. System of Rice Intensification (SRI) has shown to be able to increase rice productivity by increasing the number of tillers. This system is known as a water-efficient cultivation. Other rice cultivation barrier is related to the use of nitrogen fertilizer. One of replacement of nitrogen fertilizer is by adding azolla. The objective of this research was identifying growth and yield of organic black rice with intermittent irrigation and application of azolla. The plant material used was black rice Cempo variety from Sleman, Yogyakarta. This experiment utilized 4 dosages of azolla as the first treatment: 100 gm-2, 200 gm-2 and 400 gm-2. The second treatment was water supply consisted of continuous flooded 2 cm; flooded 2 cm every 3 days; flooded 2 cm every 6 days. The results depicted that the application of azolla was able to increase the growth of black rice. Azolla of 200 gm-2 and 400 gm-2 and intermittent 3 days to 6 days generated higher dry grain, anthocyanin and antioxidant. Azolla 200 gm-2 with intermittent irrigation 3 days could be a good combination to improve plant growth, yield and properties of local black rice.

  9. The export potential of traditional varieties of rice from Bangladesh

    OpenAIRE

    Stringfellow, Rachel; Swetman, Tony

    1996-01-01

    This research is funded by the Overseas Development Administration's Crops Post Harvest Programme. The objective of the research is to bring together information on prevailing quality/price relationships for traditional varieties of rice in Bangladesh and for competing products on the world market in order to make a judgement about Bangladesh's ability to enter the export trade for speciality rices.

  10. The improvement of rice varieties for major pest and diseases resistance

    International Nuclear Information System (INIS)

    Sahi, I.; Silitonga, T.S.

    1988-01-01

    Since 1971, the rice breeding program in Indonesia has developed on intensive program to improve varieties for yield potential, resistancy to major pests and diseases, early maturity good grain and eating quality. In recent years, the attacks of insects and diseases are very severe in rice cultivation in Asia. Much of the losses were due to acontinuous planting or certain varieties. Between 1966 and 1973 tungro occured in epidemic proportions on separate occasions in Indonesia, Thailand, Nort East India, Bangladesh, and Philippine. Since 1973, investation of brown planthopper and green leafhopper several damaged rice crop in most parts of Indonesia. Presently, rice improvement are directed to develop high yielding rice varieties that are resistant to brown planthopper, ragged stunt virus, blast, green leafhopper, and gallmidge. Screening for pests and diseases are conducted in the laboratory as well as in the field. The adoption of those improved varieties by farmers has contributed greatly in our efforts to attain self sufficiency in rice production in Indonesia. GH 147 -M-40 krad-Pn-89 (irradiated Barito) showed resistant to brown planthopper biotype 1 and 2 and moderately resistant to biotype 3. Napa 40 krad-St-12 has resistant reaction to blast. (authors). 4 refs, 8 tabs

  11. Genetic structure and diversity of indigenous rice (Oryza sativa) varieties in the Eastern Himalayan region of Northeast India.

    Science.gov (United States)

    Choudhury, Baharul; Khan, Mohamed Latif; Dayanandan, Selvadurai

    2013-12-01

    The Eastern Himalayan region of Northeast (NE) India is home to a large number of indigenous rice varieties, which may serve as a valuable genetic resource for future crop improvement to meet the ever-increasing demand for food production. However, these varieties are rapidly being lost due to changes in land-use and agricultural practices, which favor agronomically improved varieties. A detailed understanding of the genetic structure and diversity of indigenous rice varieties is crucial for efficient utilization of rice genetic resources and for developing suitable conservation strategies. To explore the genetic structure and diversity of rice varieties in NE India, we genotyped 300 individuals of 24 indigenous rice varieties representing sali, boro, jum and glutinous types, 5 agronomically improved varieties, and one wild rice species (O. rufipogon) using seven SSR markers. A total of 85 alleles and a very high level of gene diversity (0.776) were detected among the indigenous rice varieties of the region. Considerable level of genetic variation was found within indigenous varieties whereas improved varieties were monoporphic across all loci. The comparison of genetic diversity among different types of rice revealed that sali type possessed the highest gene diversity (0.747) followed by jum (0.627), glutinous (0.602) and boro (0.596) types of indigenous rice varieties, while the lowest diversity was detected in agronomically improved varieties (0.459). The AMOVA results showed that 66% of the variation was distributed among varieties indicating a very high level of genetic differentiation in rice varieties in the region. Two major genetically defined clusters corresponding to indica and japonica groups were detected in rice varieties of the region. Overall, traditionally cultivated indigenous rice varieties in NE India showed high levels of genetic diversity comparable to levels of genetic diversity reported from wild rice populations in various parts of the

  12. Fat-soluble bioactive components in colored rice varieties.

    Science.gov (United States)

    Minatel, Igor Otavio; Han, Sang-Ik; Aldini, Giancarlo; Colzani, Mara; Matthan, Nirupa R; Correa, Camila Renata; Fecchio, Denise; Yeum, Kyung-Jin

    2014-10-01

    Bioactive components in rice vary depending on the variety and growing condition. Fat-soluble components such as γ-oryzanol, tocopherols, tocotrienols, carotenoids, and fatty acids were analyzed in brown, sugary brown, red, and black rice varieties using established high-performance liquid chromatography (HPLC) and GC methodologies. In addition, these colored rice varieties were further analyzed using a high-resolution liquid chromatography-mass spectrometry/mass spectrometry (LC-MS/MS) (LTQ-Orbitrap XL) to identify the [M-H](-) ions of γ-oryzanol, ranging from m/z 573.3949 to 617.4211. The highest content of tocopherols (α-, 1.5; γ-, 0.5 mg/100 g) and carotenoids (lutein 244; trans-β carotene 25 μg/100 g) were observed in black rice; tocotrienols (α-, 0.07; γ-, 0.14 mg/100 g) in red rice, and γ-oryzanol (115 mg/100 g) in sugary brown rice. In all colored rice varieties, the major fatty acids were palmitic (16:0), oleic (18:1n-9), and linoleic (18:2n-6) acids. When the γ-oryzanol components were further analyzed by LC-MS/MS, 3, 10, 8, and 8 triterpene alcohols or sterol ferulates were identified in brown, sugary brown, red, and black rice varieties, respectively. Such structural identification can lead to the elucidation of biological function of each component at the molecular level. Consumption of colored rice rich in beneficial bioactive compounds may be a useful dietary strategy for achieving optimal health.

  13. Quantifying intrinsic quality of commercial varieties of Basmati rice

    International Nuclear Information System (INIS)

    Sagar, M.A.; Salim, M.; Siddiqui, H.

    2003-01-01

    Twelve quality-trait of five commercial varieties of Basmati rice viz: Basmati 370, Basmati 385, Basmati 198, Basmati 6129 and Super Basmati, were determined according to standard methods. Under existing conditions, it is very difficult to assess overall quality of Basmati rice-varieties, because if a variety is superior in one quality trait, it is inferior in another quality trait, to some other Basmati rice variety, which creates confusion. In order to determine the overall quality-status, we have made an effort to quantify the various quality-traits. Each quality-trait has been allotted a score, in terms of its importance, and the overall status of each variety is computed. Based on our estimation, Super Basmati is of highest quality (98.21%), followed by Basmati 6129 (96.46%), Basmati 370 (95.59%), Basmati 385 (95.26%) and Basmati 198 (92.95%). (author)

  14. Breeding of a new special rice variety Hangxiangnuo

    International Nuclear Information System (INIS)

    Zhou Hanqin; Pang Dajian; Fan Zhilan; Liu Chuanguang; Li Chen; Chen Jianyou

    2011-01-01

    A new special rice variety Hangxiangnuo was bred by several generation selections of the progeny of the rice variety Nanfengnuo which was carried by the spacecraft Shenzhou No 4. Hangxiangnuo was permitted to release by the Crop Examination and Approval Committee of Guangdong Province in January, 2009. Compared with its parent variety Nanfengnuo, Hangxiangnuo has better resistance to blast, greater length-width ratio of grain, more panicles per plant, filled grains per panicle and fragrance. The efficiency of space mutation breeding and the generation at which mutant traits become homozygous were also discussed in the paper. (authors)

  15. Comparisons of dioxin levels of cucumber varieties and cultivation periods

    Energy Technology Data Exchange (ETDEWEB)

    Eun, H.; Watanabe, E.; Ishii, Y.; Ueji, M. [National Inst. for Agro-Environmental Sciences, Tsukuba (Japan); Narita, I.; Nakamura, K. [Saitama Prefecture Agriculture and Forestry Research Center, Saitama (Japan)

    2004-09-15

    According to a 2001 survey on Daily Intake in Japan, the total dioxins intake of a person in Japan amounts to 1.68 pg-TEQ per kg of body weight/day on average. The sharing a percentage of agricultural crops was about 3%in Japanese TDI amounts. However, all cases collect samples from supermarkets to estimate TDI of dioxins, which make it difficult to understand under what environment, food samples were pretreated and cultivated. Especially, TDI values in agricultural crops are probably dependent on the collection situation. In the agricultural environment, some reports indicate that dioxins have accumulated in paddy and upland in Japan due to the past use of some types of agricultural chemicals, which contained dioxins as impurities. Furthermore, taking the atmospheric pathway, for example, dioxins in the ambient air are associated with particulate matter and fall to the ground, contaminating agricultural land. Thus, it has been emphasized that dioxin compounds have a possibility to have adverse effect on vegetables. However, there is little understanding related to this fact in the country and worldwide. Empirical studies conducted in Japan and abroad have reported low residual concentrations of dioxins in cucumbers (Cucumis sativus L.), a member of the gourd family. However, there have been extremely few instances of research involving overall comparisons of cultivation environments. Thus, we studied the persistence of dioxins in cucumbers of different varieties cultivated outdoors over varying cultivation periods, conducting thorough experiments to elucidate the actual conditions and mechanisms of dioxin contamination of cucumbers.

  16. Motivation of farmers to cultivate organic rice in Central Java

    Science.gov (United States)

    Dalmiyatun, T.; Eddy, B. T.; Sumekar, W.; Mardiningsih, D.

    2018-01-01

    The consumer’s need for organic agricultural products increases sharply along with awareness of health, lifestyle and environmental concern. This research was intended to determine the relationship between social factors and the motivation of farmers for cultivating organic rice in Central Java. The research has been done by survey to farmers groups at three regions i.e. Semarang, Sragen and Demak. The determination of the location was carried out by means of purposive i.e. farmer groups that conduct organic rice cultivation (not semi organic). The determination of the sample was conducted purposively for a number of 50 people each regencies. Data were analyzed descriptive analysis and rank Spearman correlation analysis. The results showed that social factors include age, cultivated area, education, farming experience have correlation with motivation. education and cultivated area of land has a fairly close relation with correlation value 0,463% and 0,242%. Based on the motivation level, 33% of farmers have high motivation, motivation of farmers varied but most of them, 54% of total farmers stated that the motivation to cultivate organic rice is the quality of organic rice products and high income.

  17. Breeding of new rice varieties by gamma-rays

    International Nuclear Information System (INIS)

    Toda, Masayuki

    1980-01-01

    The breeding procedure for and the agronomic characteristics of some new rice varieties are reported. The seeds of the non-waxy variety ''Toyonishiki'' were exposed to 20 kR of gamma-ray. Two out of 20,000 panicles produced on these plants had waxy grain, and one of these brought forth a new commercial variety, ''Miyuki-mochi''. The yield of the new variety was reduced by 8% as compared with the original variety, but the heading date, culm length, panicle length and the number of panicles of the new variety were almost the same as those of the original variety. If compared with the old leading waxy variety, ''Shinano-mochi'', ''Miyuki-mochi'' is superior in yield by 15% and has high resistance to lodging and to rice blast. Seven other rice varieties were irradiated to obtain waxy mutants, and the frequency of R 1 panicles carrying waxy grains was found to be 1/10,000. There was marked difference in the 1,000 grain weight of these mutants relative to those of the respective original varieties and in amylose content among the waxy mutant strains. A new Saka-mai variety (for Sake brewing), ''Miyamanishiki'', was obtained from ''Takanenishiki'' (30 kR exposure of dry seeds). The most important character for Saka-mai is to have white-core grains. An experiment with several rice varieties showed that the frequency of white core grains was about 0.15% in the control and about 0.21% in the R 1 plants after irradiation. A desirable large grain strain, ''Shinho No. 12'', from ''Todorokiwase'', and a desirable mutant strain suitable as feed for domestic animals, ''Shinho No. 38'', from ''Toyonishiki'' were also obtained by gamma-ray irradiation. (Kaihara, S.)

  18. Dwarf mutant of rice variety Seratus Malam

    International Nuclear Information System (INIS)

    Mugiono, P. S.; Soemanggono, A.M.R.

    1989-01-01

    Full text: Seeds of 'Seratus Malam', a local tall upland variety with long panicles and high yield potential were irradiated with 10-50 krad gamma rays in 1983. From 50,000 M 2 plants, 130 semidwarf mutants and 1 dwarf mutant were selected. The dwarf mutant M-362 was obtained from the 10 krad treatment. The mutant shows about 50% reduction in plant height, but also in number of productive tillers. Thus the yield per plant is also significantly less. However, the mutant gene is not allelic to DGWG and therefore may be useful in cross breeding. (author)

  19. Engineering properties of high and low altitude rice varieties from Kashmir valley at different processing levels

    Directory of Open Access Journals (Sweden)

    Raees Haq

    2016-12-01

    Full Text Available The knowledge of engineering properties such as gravimetrical properties (1,000 grain mass, bulk density, true density, and porosity, dimensional properties (length, width, thickness, aspect ratio, surface area, geometric mean diameter, and sphericity, frictional properties (angle of repose and coefficient of friction, and aerodynamic properties (drag coefficient and terminal velocity are necessary parameters related to machine design for different agricultural process operations such as handling, harvesting, threshing, cleaning, conveying, sorting, drying, processing, and storage. India is a vast country and contributes 20% of the total world’s rice production with cultivars ranging from the scented long grain ones to the sticky short grains. The Kashmir valley cultivates mainly short–medium bold varieties as temperate conditions in the valley are not suitable for the cultivation of long grain scented basmati rice. The most steps in cultivation and postharvest processing are manual and the aim of this work is to emphasize which variety sustains the processing steps to produce high yield quality rice for strengthening the economic conditions of the people.

  20. 'Hari', a mutant cross derived rice variety released In India

    Energy Technology Data Exchange (ETDEWEB)

    Narahari, P [Nuclear Agriculture Division, Bhabha Atomic Research Centre (BARC), Trombay, Bombay (India)

    1989-01-01

    Full text: TR-RNR-21 is a derivative from a cross between 'IR-8' and 'TR-5', the latter being a N{sub f}-induced dwarf mutant of the salt tolerant variety SR-26-B. In initial yield evaluations at BARC during 1972-78 it gave higher yields of 54% in monsoon season and 19% in dry season over 'Jaya' and compared favourably with 'IR-8' and 'Sona'. During 1975-80, trials were conducted by the Andhra Pradesh Agricultural University (APAU), Rajendranagar and the All India Co-ordinated Rice Improvement Project (AICRIP), at Rajendranagar, Hyderabad. In these trials TR-RNR-21 was compared with 'Pankaj', 'Jaya', RP-4-14, 'Sona', 'Surekha', RNR-323341 and 'Prabhat'. Compared with the highest yielding check and all the seven checks combined, overall average yields of TR-RNR-21 were higher by 10.1 and 19.8% respectively. Since 1981, TR-RNR-21 was included in minikit trials of Andhra Pradesh State. Results from over 90 locations of the Telangana region show that mean grain yield of 3843 kg/ha was 19% more than the yield of the local checks. In view of its consistently superior performance, TR-RNR-21 was released as 'Hari' in 1987 for general cultivation in the irrigated transplanted conditions of the Telangana region of Andhra Pradesh, excepting the endemic gall midge prone areas. 'Hari' is a medium duration variety maturing within 135-140 days. It is a semi-dwarf (93 cm), erect, compact and non-lodging type with dark green foliage; anthocyanin pigment absent; grain long (10.1 mm), slender with kernel length/breadth ratio of 3.54; kernel flinty, white, translucent and non-glutinous; white belly absent; TGW 25.2 g; protein content 7.1%; bulling, milling and head recovery - 80, 74.5 and 68% respectively; cooking quality good. It is not affected seriously by blast, tungro virus, sheath blight and brown leaf spot diseases and green leaf hopper, leaf folder and stem borer insect pests. A characteristic of this variety is that the flag leaf is long, stays far above the panicle and

  1. Effects of Variety and Hydration of Rice Flour on Cake Making Properties

    OpenAIRE

    長沼, 誠子; NAGANUMA, Seiko

    1993-01-01

    The pysicochemical characteristics and sensory attributes of rice layer cake were investigated to study the effects of rice variety and rice flour treatment on cake making properties. The rice layer cake were made from rice flour ground from 4 rice varieties (Sasanishiki, Akitakomachi, Kiyonishiki and Akihikari), water, sugar, oil, and baking powder. The treatment of rice frour with water before adding other ingredients improved appearance, texture and palatability of the baking products. The...

  2. Determinants of adoption and productivity of improved rice varieties ...

    African Journals Online (AJOL)

    The study employed adoption index, logit model and stochastic frontier model to assess the adoption status, its determinants and impact on farmers' productivity respectively. The results show that farmers have responded appreciably to intervention programme that promote the use of improved rice varieties with an adoption ...

  3. Allelopathic potential of selected rice varieties | Karim | African ...

    African Journals Online (AJOL)

    Average percent inhibition (API) in lettuce due to allelopathic effect of different rice varieties/lines was estimated. Under greenhouse conditions, double-pot technique was followed using barnyard grass (Echinochloa crusgalli L.) as indicator plant. The changes in barnyard grass plant charcters due to allelopathic effect of ...

  4. Agronomic performance of five rice varieties and nutritive value of ...

    African Journals Online (AJOL)

    Exp. 1), chemical composition and in vitro gas production (Exp. 2) of five varieties of rice; Hybrid, Exbaika, Jasmine 85, IR841 and Long grain ordinary 2. Experiment 1 was conducted in a randomized complete block design with four replicates ...

  5. Factors Affecting the Adoption of Improved Rice Varieties in Borno ...

    African Journals Online (AJOL)

    USER

    The study investigated the factors that affect adoption of improved rice varieties in the ... give a good results and also a threat to food security. Keywords: ..... decision of the farmers, however, inappropriate chain of supply/distributing the input or ...

  6. Potential of mutation breeding in improving Indonesian local rice varieties

    International Nuclear Information System (INIS)

    Sobrizal

    2016-01-01

    Rice (Oryza sativa L.) is an important cereal crops for human nutrition, this species can be divided into sub-species i.e. Indica and Japonica. Japonica sub-species consists of Temprate and Tropical Japonica (it is called as Javanica) groups. Mostly Javanica group originated from Indonesia, the people mentioned as Indonesian local varieties, it was covering more than 8000 varieties. This paper aims is to discuss the potential of mutation breeding, success stories and on going activities improved genetically the local rice varieties. Indonesian local varieties have been tested naturally for resistance to biotic and abiotic stresses so that they become useful collections of genetic resources. They usually adapted well toa specific environment where they grow largely, having good aroma and eating quality, but they have some weakness such very long growth duration, susceptible to lodging, unresponsive to fertilizer, and low yield. Seed multiplication is usually conducted by collecting seeds from farmer's fields so that the seed quality, especially for seeds purity level is very low. Improvements of seed quality is usually conducted through purification of exciting varieties, then, the result is released as a new variety. Other ways, some new varieties were improved through mutation breeding, for example, an early maturing mutant variety of Pandan Putri derived from irradiated Pandan Wangi variety from Cianjur area. The success story to reduce harvest age of Pandan Wangi variety through mutation breeding, it was triggers other local governments to use nuclear technology in improving agronomic traits of their local rice varieties, without altered another good characters. (author)

  7. Different Aluminum Tolerance among Indica, Japonica and Hybrid Rice Varieties

    Directory of Open Access Journals (Sweden)

    Shu Chang

    2015-05-01

    Full Text Available Hydroponic cultures were conducted to compare the aluminum (Al tolerance among different rice (Oryza sativa L. varieties, including indica, japonica and their hybrids. The results showed that the root growth of rice plant was inhibited in different degrees among Al treated varieties. The Al tolerance observed through relative root elongation indicated that five japonica varieties including Longjing 9, Dharial, LGC 1, Ribenyou and Koshihikari were relatively more tolerant than indica varieties. Most indica varieties in this study, such as Aus 373 and 9311 (awnless, were sensitive to Al toxicity. The Al tolerance of most progenies from japonica × indica or indica × japonica crosses was constantly consistent with indica parents. The differences of Al tolerance among Longjing 9 (japonica, Yangdao 6 (indica and Wuyunjing 7 (japonica were studied. Biomass and the malondial-dehyde content of Yangdao 6 under Al exposure decreased and increased, respectively, while there was no significant effect on those of Longjing 9 and Wuyunjing 7. Remarkable reduction of root activities was observed in all these three rice varieties. Significantly higher Al content in roots was found in Yangdao 6 compared to Longjing 9 or Wuyunjing 7.

  8. Isoenzymes performance of some rice varieties and their mutants

    International Nuclear Information System (INIS)

    Winarno, Ermin; Suliwarno, Ambyah; Ismachin, M.

    1992-01-01

    Isoenzymes performance of some rice varieties and their mutants. Genetics studies on alcohol dehydrogenase, malic enzyme, peroxidase, acid phosphase, and aminopeptidase isoenzymes were carried out on several groups of rice varieties and their mutant lines. The first groups consisted of Atomita I, Pelita I/1, A227/5, Mudgo, TN-1, and IR-26. The second group was Cisadane variety and its five mutants, namely OBS 18, OBS 208, OBS 297, OBS 306, and OBS 330. The third group was mutants line 627-10-3 and its mutants, namely 1063, 1066, 1067, 1076, and 1090. Isoenzymes extracts of the rice leaves were fractionated using polyacrylamide gel disc electrophoresis. The pattern of acid phosphate isoenzyme shows the specific character of rice mutants susceptible to brown plant hopper biotype 1. The gene(s) controlling malic enzyme in Cisadane's mutants is (are) estimated more resistant toward gamma irradiation than gene(s) responsible for controlling the other enzymes. Generally, the isoenzymes zymograms show that gene(s) controlling the mutants enzyme have undergone mutation. This case is shown by the changes of Rm value, as well as the amount and intensity of mutants bands. (authors). 7 refs., 7 figs

  9. Mapping regional risks from climate change for rainfed rice cultivation in India.

    Science.gov (United States)

    Singh, Kuntal; McClean, Colin J; Büker, Patrick; Hartley, Sue E; Hill, Jane K

    2017-09-01

    Global warming is predicted to increase in the future, with detrimental consequences for rainfed crops that are dependent on natural rainfall (i.e. non-irrigated). Given that many crops grown under rainfed conditions support the livelihoods of low-income farmers, it is important to highlight the vulnerability of rainfed areas to climate change in order to anticipate potential risks to food security. In this paper, we focus on India, where ~ 50% of rice is grown under rainfed conditions, and we employ statistical models (climate envelope models (CEMs) and boosted regression trees (BRTs)) to map changes in climate suitability for rainfed rice cultivation at a regional level (~ 18 × 18 km cell resolution) under projected future (2050) climate change (IPCC RCPs 2.6 and 8.5, using three GCMs: BCC-CSM1.1, MIROC-ESM-CHEM, and HadGEM2-ES). We quantify the occurrence of rice (whether or not rainfed rice is commonly grown, using CEMs) and rice extent (area under cultivation, using BRTs) during the summer monsoon in relation to four climate variables that affect rice growth and yield namely ratio of precipitation to evapotranspiration ( PER ), maximum and minimum temperatures ( T max and T min ), and total rainfall during harvesting. Our models described the occurrence and extent of rice very well (CEMs for occurrence, ensemble AUC = 0.92; BRTs for extent, Pearson's r = 0.87). PER was the most important predictor of rainfed rice occurrence, and it was positively related to rainfed rice area, but all four climate variables were important for determining the extent of rice cultivation. Our models project that 15%-40% of current rainfed rice growing areas will be at risk (i.e. decline in climate suitability or become completely unsuitable). However, our models project considerable variation across India in the impact of future climate change: eastern and northern India are the locations most at risk, but parts of central and western India may benefit from increased

  10. IDENTIFICATION OF WIDE COMPATIBILITY VARIETIES IN SOME TROPICAL JAPONICA RICE

    Directory of Open Access Journals (Sweden)

    A. Hairmansis

    2013-07-01

    Full Text Available The F1 hybrid sterility in indica/japonica crosses is the major barrier in developing hybrid rice varieties between these two diverse germplasm. The sterility problem in japonica/indica hybrids can be overcome by using wide compatibility genes. The objective of this study was to identify wide compatibility varieties (WCVs in some tropical japonica rice. Twenty five tropical japonica varieties as male parents were crossed with indica (IR64 and japonica (Akitakomachi testers as female parents. The crosses were planted following a randomized complete block design with three replications. Varieties having average spikelet fertility of more than 70% with both the indica and japonica testers were rated as WCVs. Result from this study showed that six tropical japonica varieties were classified as WCVs, i.e., Cabacu, Grogol, Kencana Bali, Klemas, Lampung Lawer, and Napa. Hybrid sterility is caused by partial sterility of male and female gametes. The WCVs from the present study can be used in hybrid rice breeding program to solve hybrid sterility in indica/japonica hybrids.

  11. Somatic embryogenesis of East Kalimantan local upland rice varieties

    Science.gov (United States)

    Nurhasanah; Ramitha; Supriyanto, B.; Sunaryo, W.

    2018-04-01

    Somatic embryogenesis is the formation, growth and development of embryos from somatic cells. Somatic embryo induction is one of the in vitro plant propagation techniques that is very important for plant developmental purposes. Four local upland rice varieties of East Kalimantan, Mayas Pancing, Gedagai, Siam and Serai, were used in this study. A total of 200 explants (mature rice grains) for each varieties were inoculated on MS solid medium supplemented with 1 mg L-1 2,4 Dichlorophenoxy acetic acid (2,4-D) and 0.5 mg L-1 6-Benzylaminopurine (BAP). The results showed that response of each variety differed to embryosomatic induction, indicated by callus induction rate and callus quality, in terms of callus color and structure. The fastest callus formation was sobserved in Gedagai variety (8 days) while Mayas Pancing (13 days) was the latest one. The rate of callus induction varied from 60 to 98.5 %, and Serai variety has the highest callus induction rate. The highest friable callus structure was found in Siam variety (89.1%) and the lowest was in Gedagai (62.5%). Callus color was dominated by the yellowish-white (transparent) on all varieties tested. Most of the callus was potential as embryogenic callus characterized from the nodular and globular of friable callus structure and its yellowish-white color.

  12. Role of varieties in sustainable rice production in Malaysia

    International Nuclear Information System (INIS)

    Othman Omar; Saad Abdullah

    2002-01-01

    Rice is the staple food of Malaysians. Rice production in Malaysia is concentrated in granary areas, which are provided with irrigation facilities. There is no plan to increase the size or the number of these granary areas, thus productivity per unit area must be increased to sustain the current level of self-sufficiency. Variety determines the potential productivity; environment and crop management determine how much of this potential is realized. Crop management is very important, as any drop in the level of management will effect productivity. However there are characteristics / factors that can be incorporated into varieties which can buffer the effect of environment and crop management. Pests and diseases can result in severe yield loss and lead to non-sustainable production. Varietal resistance to some of these diseases can be incorporated into rice varieties. Active breeding to incorporate rice resistance to blast, PMV (tungro), bacterial blight and brown planthopper is being currently carried out Factors that determine or justify the active breeding status are: importance of Oe pests diseases, resistance sources and the availability of efficient screening procedure. Sheath blight is also an important disease in direct seeded crops as it can cause severe yield loss, but good resistant sources are not available for incorporation and the screening procedure is also not very efficient. Biotechnologists are working hard to introduce resistance from other crops and also develop other resistance mechanisms for sheath blight. Water, shortage or excess, is a major cause of non-sustainable production. The breeding of short-term varieties can overcome water problems or shortages. Negative interaction between varietal characteristics and environment do occur. Finally farmers have to decide which factors of the environment cannot be easily controlled, and choose the correct varieties in order to achieve sustainable production. (Author)

  13. Modified rice cultivation in Tamil Nadu, India: Yield gains and farmers' (lack of) acceptance

    NARCIS (Netherlands)

    Senthilkumar, K.; Bindraban, P.S.; Thiyagarajan, T.M.; Ridder, de N.; Giller, K.E.

    2008-01-01

    The looming water crisis and water-intensive nature of rice cultivation are driving the search for alternative management methods to increase water productivity in rice cultivation. Experiments were conducted under on-station and on-farm conditions to compare rice production using modified methods

  14. High yielding small grain mutant of rice variety Pankaj

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    1987-07-01

    Full text: By treatment with EMS a mutant has been produced from the variety Pankaj which has better tillering, longer panicle and more grains per panicle. In multilocation trials at Burdwan, Suri and Rampurhat in West Bengal it yielded significantly more than Pankaj and Mahsuri at all locations, with a mean 5.2t. The mutant named BU 79 would be a suitable substitute for Pankaj and similar long-duration rices. (author)

  15. Oyster mushroom cultivation with rice and wheat straw.

    Science.gov (United States)

    Zhang, Ruihong; Li, Xiujin; Fadel, J G

    2002-05-01

    Cultivation of the oyster mushroom, Pleurotus sajor-caju, on rice and wheat straw without nutrient supplementation was investigated. The effects of straw size reduction method and particle size, spawn inoculation level, and type of substrate (rice straw versus wheat straw) on mushroom yield, biological efficiency, bioconversion efficiency, and substrate degradation were determined. Two size reduction methods, grinding and chopping, were compared. The ground straw yielded higher mushroom growth rate and yield than the chopped straw. The growth cycles of mushrooms with the ground substrate were five days shorter than with the chopped straw for a similar particle size. However, it was found that when the straw was ground into particles that were too small, the mushroom yield decreased. With the three spawn levels tested (12%, 16% and 18%), the 12% level resulted in significantly lower mushroom yield than the other two levels. Comparing rice straw with wheat straw, rice straw yielded about 10% more mushrooms than wheat straw under the same cultivation conditions. The dry matter loss of the substrate after mushroom growth varied from 30.1% to 44.3%. The straw fiber remaining after fungal utilization was not as degradable as the original straw fiber, indicating that the fungal fermentation did not improve the feed value of the straw.

  16. Water management, rice varieties and mycorrhizal inoculation influence arsenic concentration and speciation in rice grains.

    Science.gov (United States)

    Zhang, Xin; Wu, Songlin; Ren, Baihui; Chen, Baodong

    2016-05-01

    A pot experiment was carried out to investigate the effects of water management and mycorrhizal inoculation on arsenic (As) uptake by two rice varieties, the As-resistant BRRI dhan 47 (B47) and As-sensitive BRRI dhan 29 (B29). Grain As concentration of B47 plants was significantly lower than that of B29, and grain As concentration of B47 was higher under flooding conditions than that under aerobic conditions. In general, mycorrhizal inoculation (Rhizophagus irregularis) had no significant effect on grain As concentrations, but decreased the proportion of inorganic arsenic (iAs) in grains of B47. The proportion of dimethylarsinic acid (DMA) in the total grain As was dramatically higher under flooding conditions. Results demonstrate that rice variety selection and appropriate water management along with mycorrhizal inoculation could be practical countermeasures to As accumulation and toxicity in rice grains, thus reducing health risks of As exposure in rice diets.

  17. Site Suitability Analysis for Dissemination of Salt-tolerant Rice Varieties in Southern Bangladesh

    Science.gov (United States)

    Sinha, D. D.; Singh, A. N.; Singh, U. S.

    2014-11-01

    Bangladesh is a country of 14.4 million ha geographical area and has a population density of more than 1100 persons per sq. km. Rice is the staple food crop, growing on about 72 % of the total cultivated land and continues to be the most important crop for food security of the country. A project "Sustainable Rice Seed Production and Delivery Systems for Southern Bangladesh" has been executed by the International Rice Research Institute (IRRI) in twenty southern districts of Bangladesh. These districts grow rice in about 2.9 million ha out of the country's total rice area of 11.3 million ha. The project aims at contributing to the Government of Bangladesh's efforts in improving national and household food security through enhanced and sustained productivity by using salinity-, submergence- and drought- tolerant and high yielding rice varieties. Out of the 20 project districts, 12 coastal districts are affected by the problem of soil salinity. The salt-affected area in Bangladesh has increased from about 0.83 million ha in 1973 to 1.02 million ha in 2000, and 1.05 million ha in 2009 due to the influence of cyclonic storms like "Sidr", "Laila" and others, leading to salt water intrusion in croplands. Three salinity-tolerant rice varieties have recently been bred by IRRI and field tested and released by the Bangladesh Rice Research Institute (BRRI) and Bangladesh Institute of Nuclear Agriculture (BINA). These varieties are BRRI dhan- 47 and Bina dhan-8 and - 10. However, they can tolerate soil salinity level up to EC 8-10 dSm-1, whereas the EC of soils in several areas are much higher. Therefore, a large scale dissemination of these varieties can be done only when a site suitability analysis of the area is carried out. The present study was taken up with the objective of preparing the site suitability of the salt-tolerant varieties for the salinity-affected districts of southern Bangladesh. Soil salinity map prepared by Soil Resources Development Institute of

  18. The improvement of cisantana rice variety through induced mutation

    International Nuclear Information System (INIS)

    Mugiono; Lilik Harsanti; Azri Kusuma Dewi

    2009-01-01

    The continuous improvement for rice through breeding is necessary to obtain new varieties with good quality and quantity. Cisantana variety hairy tips could be improved by mutation breeding. Seeds of Cisantana variety was irradiated by gamma rays ( 60 Co) at doses of 0.10, 0.20 and 0.30 kGy respectively at the Center for Application of Isotope and Radiation (CAIR) - Batan, Pasar Jumat, Jakarta. There after the irradiated seeds were planted as M1 plants at the CAIR’S experiment field in the dry season of 2000. Selection was carried out at the M2 generation and stressed on early maturity and bald spike. This was done at the experiment field at Pusakanegara - Subang in the Wet season of 2001/2002. From this population 19 mutants having early maturity and bald spike lets were selected. Purification in the next generation obtained 10 mutants which were homogeneous and without segregation. From these 10 mutants two mutant lines Obs-1688/PsJ and Obs-1692/PsJ were further tested. These two mutant lines showed good productivity and adaptability when tested at several locations. The resistance test for brown plant hopper and bacterial leaf blight disease showed that these two mutant lines are resistant to biotype 1 and 2, and medium resistant to biotype 3 of brown plant hopper, and also resistant to strain 3 and medium resistant to strain IV of bacterial leaf blight disease. These two mutant lines have good rice quality and were gelatinous. The Obs-1688/PsJ and Obs-1692/PsJ mutant lines were released as new rice varieties by the Minister of Agriculture and officially address as Mira-1 at 2006 and Bestari at 2008, respectively. (author)

  19. Use of the p-SINE1-r2 in inferring evolutionary relationships of Thai rice varieties with AA genome

    Directory of Open Access Journals (Sweden)

    Preecha Prathepha

    2006-01-01

    Full Text Available In a previous study we described the prevalence and distribution in Thailand of the retroposon p- SINE1-r2, in the intron 10 of the waxy gene in cultivated and wild rice with the AA genome. In this study, additional varieties of rice were collected and sequencing was used to further characterize p-SINE1-r2. It was found that the length of the p-SINE1-r2 nucleotide sequences was about 125 bp, flanked by identical direct repeats of a 14 bp sequence. These sequences were compared and found to be similar to the sequences of p- SINE1-r2 found in Nipponbare, a rice strain discussed in a separate study. However, when compared the 48 DNA sequences identified in this study, much dissimilarity was found within the nucleotide sequences of p- SINE1-r2, in the form of base substitution mutations. Phylogenetic relationships inferred from the nucleotide sequences of these elements in cultivated rice (O. sativa and wild rice (O. nivara. It was found that rice accessions collected from the same geographical distribution have been placed in the same clade. The phylogenetic tree supports the origin and distribution of these rice strains.

  20. Glutinous rice variety R817 for good quality wine developed by radiation induced mutation

    International Nuclear Information System (INIS)

    Zhang Mingxian; Luo Rongting; Xu Baocai

    1987-01-01

    Full text: The variety has been developed by gamma irradiation of dry seeds of Ai Shang Nu' at Zhejiang Academy of Agricultural Sciences. The main characteristics are as follows: 1. It has higher yield: Average about 6000 kg/ha, maximum 7800 kg/ha in trials, about 10% above the control variety 'Shang Nuo No. 4'. 2. It is disease resistant: After artificial inoculation resistant to rice blast pathotypes A, A63, B1, B15, C3, C13, C15, D3, E1, G1. 3. The growing period of the variety is about 136 days in Hangzhou. 3 days earlier than the original variety. The seedling period could be long or short. 4. It has good grain quality suitable for making Xiang Xue, Shan Miang and other well known rice wines. The variety is being grown all over our province and in some neighbouring provinces. Its cultivation area was 2000 ha in 1984, more than 8000 ha in 1985 and is rapidly increasing. (author)

  1. Chemometric classification of pigmented rice varieties based on antioxidative properties in relation to color

    Directory of Open Access Journals (Sweden)

    Phaiwan Pramai

    2016-10-01

    Full Text Available The pigmented Thai rice varieties including red and black color and non-pigmented rice (white collected from different growth sites in the north of Thailand and were determined for color and antioxidant properties. Anthocyanins were the major compound in group of black rice (21.15-441.96 mg/100 g rice. Total phenolic, flavonoid, and -tocopherol contents were highest in the black rice followed by red rice and antioxidant capacities were predominant in pigmented varieties. Black rice grown in mountainous area presented the highest antioxidant activity compared to the other growing locations. The color parameters, especially L* value presented the negative correlations with antioxidant parameters, while the antioxidant contents, excepted -oryzanol content had significant correlation with antioxidant capacities. Pigmented rice varieties could be clearly classified into 4 groups using PCA and HCA, which provided a good indicator to classify pigmented rice varieties based on color and antioxidative properties.

  2. Effect of germination on the physicochemical and antioxidant characteristics of rice flour from three rice varieties from Nigeria.

    Science.gov (United States)

    Chinma, Chiemela Enyinnaya; Anuonye, Julian Chukwuemeka; Simon, Omotade Comfort; Ohiare, Raliat Ozavize; Danbaba, Nahemiah

    2015-10-15

    This study determined the effect of germination (48 h) on the physicochemical and antioxidant characteristics of rice flour from three rice varieties from Nigeria. Local rice varieties (Jamila, Jeep and Kwandala) were evaluated and compared to an improved variety (MR 219). Physicochemical and antioxidant properties of flours were determined using standard methods. Protein, magnesium, phosphorus, potassium and antioxidant properties of rice flours increased after germination while phytic acid and total starch contents decreased. Foaming capacity and stability of rice flours increased after germination. Germination resulted to changes in pasting and thermal characteristics of rice flours. Germinated rice flours had better physicochemical and antioxidant properties with reduced phytic acid and starch contents compared to MR 219, which can be utilized as functional ingredients in the preparation of rice-based products. Copyright © 2015 Elsevier Ltd. All rights reserved.

  3. Glycaemic indices of different varieties of rice grown in Sri Lanka.

    Science.gov (United States)

    Hettiarachchi, P; Jiffry, M T; Jansz, E R; Wickramasinghe, A R; Fernando, D J

    2001-03-01

    Varieties of red raw rice are widely believed to have a better nutritional quality. The physiological effects of consuming different varieties of rice may not be so. The glycaemic index has been developed as an indicator of the physiological effect of foods. It is the glycaemic response of a 50 g carbohydrate portion of food expressed as a percentage of that of a standard. The objective of this study was to determine the glycaemic indices of different varieties of rice grown in Sri Lanka. Digestible carbohydrate content of 11 varieties of rice flour and bread were determined. Fasting blood samples followed by half-hourly samples for two hours were drawn after giving portions of either cooked rice or bread containing 50 g carbohydrate each. Fibre mill in Gampaha district. Twenty-two fibre mill workers aged between 25 and 50 years. The area under the blood glucose curve (AUC) for varieties of rice for a subject was calculated. Average AUC of 3 values for bread were calculated. Glycaemic index of each variety of rice was determined from the above variables. Glycaemic indices of varieties of rice differ. The glycaemic indices of varieties of red raw rice varied between 56 and 73 and the variety Bg 350 had the lowest glycaemic index. There was no significant difference between mean glycaemic index of varieties of white raw and some varieties of red raw rice (p = 0.2). Parboiled varieties of red raw rice had a significantly lower glycaemic index than white raw rice (p = 0.04) and some of the red raw rice (p = 0.005). The glycaemic index cannot be predicted from the colour of the rice grain. Red parboiled varieties of rice and Bg 350 can be recommended for patients with diabetes.

  4. Assessment of suitability of selected rice varieties for production of expanded rice

    Directory of Open Access Journals (Sweden)

    Vijayalaxmi Kamaraddi

    2015-12-01

    Full Text Available Expanded rice, prepared from pre-gelatinized milled rice by sand roasting method, is a popular snack food of India. Five high-yielding rice varieties of Hill zone of Karnataka state, viz., IET-13901, KHP-2, KHP-5, KHP-10, and Intan were screened for puffing quality based on their physicochemical, functional, nutritional and organoleptic parameters with Rajamudi as local check. The effect of varietal differences on expansion/puffing quality parameters, in vitro digestibility of starch and protein as well as bioaccessibility of iron, zinc, and calcium were determined. Results indicated a strong positive correlation between amylose content and expansion ratio and a negative correlation between protein and amylose content, length expansion ratio and volume expansion ratio. Expansion characteristics showed that the varieties suitable for production of puffed rice were KHP-2, IET-13901 and Intan. Nutritional analysis showed following ranges of nutrient content in expanded rice: protein, 6.22–8.17%; fat, 0.06–0.14%; and as mg/100 g calcium, 20.5–23.5; iron, 2.01–2.72; zinc, 1.22–1.82; thiamine, 0.315–0.470; riboflavin, 0.051–0.069; and niacin, 3.18–4.68. Nearly 80.3–80.8% starch and 67.6–83.2% protein was digestible. Among all varieties, KHP-2 had lowest amount of rapidly digestible starch (61.4%. Mineral bioaccessibility ranged from 42.7 to 52.1%. Sensory analysis indicated that Intan and KHP-2 were superior and suited for production of expanded rice.

  5. Identification of Striga hermonthica-resistant Upland Rice Varieties in Sudan and Their Resistance Phenotypes

    Directory of Open Access Journals (Sweden)

    Hiroaki eSamejima

    2016-05-01

    Full Text Available Rice has become a major staple cereal in sub-Saharan Africa. Currently, upland rice cultivation is expanding particularly in rainfed areas where the root parasitic weed Striga hermonthica, a major constraint to cereal production, is endemic. Laboratory, pot, and semi-controlled open air experiments were performed to evaluate resistance of selected rice varieties in Sudan to a resident S. hermonthica population. In the laboratory, 27 varieties were screened for post-attachment resistance using the rhizotron technique. Varieties displaying high post-attachment resistance, Umgar, NERICA5, and NERICA13 together with NERICA4, NERICA18, and Nipponbare, a lowland rice variety, were further evaluated for performance and Striga resistance in pot and semi-controlled open air experiments and for germination inducing activity in a laboratory. In addition, comparative studies on reaction of Umgar, Kosti1 and Kosti2, released varieties for commercial production in Sudan, to the parasite were performed in two pot experiments. In the pot experiments Umgar and NERICA5, consistently, sustained the lowest Striga emergence (< 2.2 Striga plants per pot, while NERICA13 and NERICA4 supported 1.8–5.7 and 8.7–16.4 Striga plants per pot, respectively. In an artificially Striga-infested field, number of emergent Striga plants per 10 rice hills, at harvest, was 2.0, 2.0, 4.8, 13.5, 13.3, and 18.3 on Umgar, NERICA5, NERICA13, NERICA4, NERICA18, and Nipponbare, respectively. Striga had no adverse effects on total above-ground parts and panicle dry weight (DW in Umgar and NERICA5. Germination-inducing activity of root exudates, at 14 days after sowing onwards, was markedly lower for Umgar than for NERICA5, NERICA13, NERICA4, and NERICA18. Based on these findings, Umgar has both pre and post-attachment resistance to a resident Striga population in Sudan. Kosti1 and Kosti2, did not exhibit Striga-resistance at the same level as Umgar. Further the resistance of NERICA5, a

  6. Identification of Striga hermonthica-Resistant Upland Rice Varieties in Sudan and Their Resistance Phenotypes.

    Science.gov (United States)

    Samejima, Hiroaki; Babiker, Abdel G; Mustafa, Ahmed; Sugimoto, Yukihiro

    2016-01-01

    Rice has become a major staple cereal in sub-Saharan Africa. Currently, upland rice cultivation is expanding particularly in rainfed areas where the root parasitic weed Striga hermonthica, a major constraint to cereal production, is endemic. Laboratory, pot, and semi-controlled open air experiments were performed to evaluate resistance of selected rice varieties in Sudan to a resident S. hermonthica population. In the laboratory, 27 varieties were screened for post-attachment resistance using the rhizotron technique. Varieties displaying high post-attachment resistance, Umgar, NERICA5, and NERICA13 together with NERICA4, NERICA18, and Nipponbare, a lowland rice variety, were further evaluated for performance and Striga resistance in pot and semi-controlled open air experiments and for germination inducing activity in a laboratory. In addition, comparative studies on reaction of Umgar, Kosti1 and Kosti2, released varieties for commercial production in Sudan, to the parasite were performed in two pot experiments. In the pot experiments Umgar and NERICA5, consistently, sustained the lowest Striga emergence (pot), while NERICA13 and NERICA4 supported 1.8-5.7 and 8.7-16.4 Striga plants per pot, respectively. In an artificially Striga-infested field, number of emergent Striga plants per 10 rice hills, at harvest, was 2.0, 2.0, 4.8, 13.5, 13.3, and 18.3 on Umgar, NERICA5, NERICA13, NERICA4, NERICA18, and Nipponbare, respectively. Striga had no adverse effects on total above-ground parts and panicle dry weight in Umgar and NERICA5. Germination-inducing activity of root exudates, at 14 days after sowing onward, was markedly lower for Umgar than for NERICA5, NERICA13, NERICA4, and NERICA18. Based on these findings, Umgar has both pre and post-attachment resistance to a resident Striga population in Sudan. Kosti1 and Kosti2 did not exhibit Striga-resistance at the same level as Umgar. Further the resistance of NERICA5, a variety reported to be endowed with a broad spectrum

  7. Both Hd1 and Ehd1 are important for artificial selection of flowering time in cultivated rice.

    Science.gov (United States)

    Wei, Fu-Jin; Tsai, Yuan-Ching; Wu, Hshin-Ping; Huang, Lin-Tzu; Chen, Yu-Chi; Chen, Yi-Fang; Wu, Cheng-Chieh; Tseng, Yi-Tzu; Hsing, Yue-Ie C

    2016-01-01

    Rice is a facultative short-day plant, and it requires a photoperiod shorter than the critical day length to get flowering. Sensitivity to photoperiod has been suggested as a major selection target in cultivated or weedy rice. The modern rice varieties in Taiwan may be cultivated twice a year. These varieties contain loss-of-function of two important flowering-time related genes, Heading date 1 (Hd1) and Early heading date 1 (Ehd1), and are mainly from a mega variety, Taichung 65. However, the parental lines of this variety were sensitive to photoperiod, thus, how Taichung 65 loss its sensitivity is a mystery. In this study, we used accession-specific single nucleotide polymorphism analysis to reveal the gene flow that occurred between different rice accessions decades ago and demonstrate that two landraces introgressed during the breeding process, which led to the loss of photoperiod sensitivity. Both Hd1 and Ehd1 may be important during artificial selection for flowering time, especially in a subtropical region such as Taiwan. This is a good example of introgression playing important roles during rice domestication. Copyright © 2015 Elsevier Ireland Ltd. All rights reserved.

  8. Effects of Variety and Fermentation Time on the Quality of Rice Wine ...

    African Journals Online (AJOL)

    A study was conducted to investigate the effect of variety and fermentation time on rice wine quality. Two rice varieties, X- Jigna and Gomera, and three fermentation times, 5, 6 and 7 days were used to study the physicochemical and sensory qualities of wine. Significant difference was observed at P<0.05 among the rice ...

  9. Physicochemical and antioxidative properties of black, brown and red rice varieties of northern Thailand

    Directory of Open Access Journals (Sweden)

    Noppawat Pengkumsri

    2015-06-01

    Full Text Available Rice, the seed of Oryza species, is the major cereal crop in most of the developing countries. Nearly 95% of global rice production is done in Asian countries, and about half of the world’s population consumes it. Some speciality rices are not commonly consumed. Colored rice is one of such variety. In these varieties, high amounts of anthocyanin pigment are deposited in the rice coat to form its black (also known as purple, brown and red colors. Minimum studies are there to explain the properties of these rice varieties of Thailand. Thus, the current study was aimed to assess the physicochemical and antioxidative properties of three rice varieties (Chiang Mai Black rice, Mali Red rice and Suphanburi-1 Brown rice of different cultivars of northern Thailand. Rice bran extracts of these three cultivars were prepared with different solvents (polar and non-polar for the evaluation of total phytochemical content and anti-oxidant free-radical-scavenging properties. Chiang Mai Black rice contained higher concentration of phenolic acid, flavonoids, and anthocyanins (Cyanidin 3-glucoside, peonidin 3-glucoside, cyanidin chloride. Chiang Mai Black rice is richer in free-radical-scavenging compounds and activities than the other tested varieties. Polar extractions of rice bran are high in anti-oxidative compounds and activities than non-polar extractions.

  10. 7 CFR 457.170 - Cultivated wild rice crop insurance provisions.

    Science.gov (United States)

    2010-01-01

    ... reinsured policies: Cultivated Wild Rice Crop Provisions. 1. Definitions Approved laboratory. A testing.... Cultivated Wild Rice. A member of the grass family Zizania Palustris L., adapted for growing in man-made... for the crop year. Planted acreage. In addition to the definition contained in the Basic Provisions...

  11. Concentration of radiocesium in rice, vegetables, and fruits cultivated in evacuation area at Okuma town, Fukushima

    International Nuclear Information System (INIS)

    Ohse, Kenji; Kitayama, Kyo; Kanno, Akira; Suzuki, Chika; Kawatsu, Kencho; Tsukada, Hirofumi; Suenaga, Seiichi; Matsumoto, Kiyoyuki

    2013-01-01

    Rice, vegetables, and fruits were cultivated in the evacuation area at Okuma town, and the radiocesium concentration of the crop samples cultivated in contaminated and decontaminated soil was compared. Decrease of the concentration in every crop by decontamination was observed. The TF of brown rice was higher than previous reports. (author)

  12. Submergence rice cultivation in southern Bangladesh: farmers opinion and adaptations practices

    Directory of Open Access Journals (Sweden)

    AKM Abdul Ahad Biswas

    2015-12-01

    Full Text Available Rice productivity in coastal Bangladesh is lower than the national average and total coastal area is considered to be submergence-prone and higher vulnerable in July to January cropping season. The selected study areas are Kalapara and Patuakhali Sadar Upazila that are too vulnerable to agriculture practices. Field survey was conducted during 01st June to 30th July, 2015 to investigate the impact of submergence on Aman rice cultivation (ARC, existing adopted local adaptation practices with impacts and options to address the submergence problem. Primary data was collected through Focus Group Discussion (FGD, Individual Interview and Key Informant Interview methods and secondary data was collected from different secondary sources. A well-structured pretested questionnaire schedule was developed keeping in mind the objectives and variables under this study. After cyclone SIDR and AILA devastation, the rate of traditional ARC is decreasing every year and in 2015 it was 26.51%. Recently farmers have adopted new cropping practices and strategies like modern ARC in Aman season as single crop; Boro-Aus-Aman season as triple crop and Aus-Aman season as double crop are practicing. Approximately all farmers have adopted to grow stress tolerant rice varieties (STRV; farmer’s curiosities to familiar with and to have the STRV are encouraging. Farmers were fully adopted BRRIdhan52 rice cultivation with positive perceptions of higher yield and lower production cost. Therefore it can be concluded that the intensity of adoption of adaptation and mitigation measures are significantly influenced positively by the STRV yield capability; farmer’s participation in intervention programs; livelihood diversification; frequency of extension personnel contact; submergence and inundation characteristics; tolerance attributes of STRV and availability of STRV cultivation information.International Journal of Environment Vol.4(4 2015: 100-113

  13. Effective Suppression of Methane Emission by 2-Bromoethanesulfonate during Rice Cultivation.

    Directory of Open Access Journals (Sweden)

    Tatoba R Waghmode

    Full Text Available 2-bromoethanesulfonate (BES is a structural analogue of coenzyme M (Co-M and potent inhibitor of methanogenesis. Several studies confirmed, BES can inhibit CH4 prodcution in rice soil, but the suppressing effectiveness of BES application on CH4 emission under rice cultivation has not been studied. In this pot experiment, different levels of BES (0, 20, 40 and 80 mg kg-1 were applied to study its effect on CH4 emission and plant growth during rice cultivation. Application of BES effectively suppressed CH4 emission when compared with control soil during rice cultivation. The CH4 emission rates were significantly (P<0.001 decreased by BES application possibly due to significant (P<0.001 reduction of methnaogenic biomarkers like Co-M concentration and mcrA gene copy number (i.e. methanogenic abunadance. BES significantly (P<0.001 reduced methanogen activity, while it did not affect soil dehydrogenase activity during rice cultivation. A rice plant growth and yield parameters were not affected by BES application. The maximum CH4 reduction (49% reduction over control was found at 80 mg kg-1 BES application during rice cultivation. It is, therefore, concluded that BES could be a suitable soil amendment for reducing CH4 emission without affecting rice plant growth and productivity during rice cultivation.

  14. Biophysical and Mechanical properties of rice varieties: attributes to ...

    African Journals Online (AJOL)

    It requires about 25N for the rice grain (IITA306) to fail at 0.7mm at horizontal and 150N to crack the rice grain in vertical position at 21.0mm, it takes 60N for the rice grain (MAS) to fail at 1.4mm and 150N to crack the rice grain at 22.5mm as well as 58N for the rice grain (R18) to fail at 1.2mm and 125N to crack the rice grain ...

  15. Deciphering the Environmental Impacts on Rice Quality for Different Rice Cultivated Areas.

    Science.gov (United States)

    Li, Xiukun; Wu, Lian; Geng, Xin; Xia, Xiuhong; Wang, Xuhong; Xu, Zhengjin; Xu, Quan

    2018-01-19

    Rice (Oryza sativa L.) is cultivated in a wide range of climatic conditions, and is one of mankind's major staple foods. The interaction of environmental factors with genotype effects major agronomic traits such as yield, quality, and resistance in rice. However, studies on the environmental factors affecting agronomic traits are often difficult to conduct because most environmental factors are dynamic and constantly changing. A series of recombinant inbred lines (RILs) derived from an indica/japonica cross were planted into four typical rice cultivated areas arranging from latitude N22° to N42°. The environmental data from the heading to mature (45 days) stages were recorded for each RIL in the four areas. We determined that light, temperature, and humidity significantly affected the milling quality and cooking quality overall the four areas. Within each area, these environmental factors mainly affected the head rice ratio, grain length, alkali consumption, and amylose and protein content. Moreover, the effect of these environmental factors dynamically changed from heading to mature stage. Compared to light and humidity, temperature was more stable and predictable, and night temperature showed a stronger correlation efficiency to cooking quality than day temperature, and the daily temperature range had contrary effects compared to day and night temperature on grain quality. The present study evaluated the critical phase during the grain filling stage by calculating the dynamic changes of correlation efficiency between the quality traits and climate parameters. Our findings suggest that the sowing date could be adjusted to improve rice quality so as to adjust for environmental changes.

  16. Improving Yield of Transplanted Aman and Boro Rice Through Tegra Package of Cultivation

    Directory of Open Access Journals (Sweden)

    MA Kader, MSR Mia, MA Kafi, MS Hossain, N Islam

    2015-12-01

    Full Text Available The study investigated the yield performance of transplant aman rice cv. BRRI dhan49 and boro rice cv. BRRI dhan29 under improved package of cultivation (TEGRA as compared to farmers’ practice. TEGRA is a rice farming practice which includes use of quality seeds and healthy seedlings, transplanting with rice transplanter, use of herbicide, use of balanced fertilization and micronutrients, and preventive plant protection measures. The study during transplant aman season included two treatments on rice cultivation method viz. TEGRA package and farmers’ practice while in boro rice four treatments viz. TEGRA package, farmers’ practice with high inputs, farmers’ practice with medium inputs and farmers’ practice with low inputs. The yield and plant characters of both transplant aman and boro rice were significantly influenced by the TEGRA package of cultivation as compared to farmers’ practice. TEGRA package of cultivation as compared to farmers’ practice increased the grain yield by 18.3% in transplant aman rice and by 80% in boro rice with less cost of production as compared to farmers’ practice, which eventually resulted 23% increase in gross return and 400% in net return. As a result, the benefit cost ratio of TEGRA package was much higher (1.35 and 2.20 during transplant aman rice and boro rice, respectively compared to that of farmers’ practice (1.07 and 1.30.

  17. Comparison of aquatic macrophyte community structure between natural wetlands and rice fields with different cultivation ages

    OpenAIRE

    Rolon, A. S.; Godoy, R. S.; Maltchik, L.

    2017-01-01

    Abstract Recent studies indicate that rice fields contribute to the conservation of aquatic plants, however, repeated cultivation can reduce the species diversity harbored by rice fields. Repeated tillage, agrochemical application and environmental homogeneity can reduce plant diversity and select for species more tolerant to disturbance. Our hypotheses were: 1) macrophyte richness and biomass decrease with increased rice crop age; and 2) macrophyte species of rice fields are a subsample of n...

  18. The carbon count of 2000 years of rice cultivation.

    Science.gov (United States)

    Kalbitz, Karsten; Kaiser, Klaus; Fiedler, Sabine; Kölbl, Angelika; Amelung, Wulf; Bräuer, Tino; Cao, Zhihong; Don, Axel; Grootes, Piet; Jahn, Reinhold; Schwark, Lorenz; Vogelsang, Vanessa; Wissing, Livia; Kögel-Knabner, Ingrid

    2013-04-01

    More than 50% of the world's population feeds on rice. Soils used for rice production are mostly managed under submerged conditions (paddy soils). This management, which favors carbon sequestration, potentially decouples surface from subsurface carbon cycling. The objective of this study was to elucidate the long-term rates of carbon accrual in surface and subsurface soil horizons relative to those of soils under nonpaddy management. We assessed changes in total soil organic as well as of inorganic carbon stocks along a 2000-year chronosequence of soils under paddy and adjacent nonpaddy management in the Yangtze delta, China. The initial organic carbon accumulation phase lasts much longer and is more intensive than previously assumed, e.g., by the Intergovernmental Panel on Climate Change (IPCC). Paddy topsoils accumulated 170-178 kg organic carbon ha(-1) a(-1) in the first 300 years; subsoils lost 29-84 kg organic carbon ha(-1) a(-1) during this period of time. Subsoil carbon losses were largest during the first 50 years after land embankment and again large beyond 700 years of cultivation, due to inorganic carbonate weathering and the lack of organic carbon replenishment. Carbon losses in subsoils may therefore offset soil carbon gains or losses in the surface soils. We strongly recommend including subsoils into global carbon accounting schemes, particularly for paddy fields. © 2012 Blackwell Publishing Ltd.

  19. Effective Suppression of Methane Emission by 2-Bromoethanesulfonate during Rice Cultivation.

    Science.gov (United States)

    Waghmode, Tatoba R; Haque, Md Mozammel; Kim, Sang Yoon; Kim, Pil Joo

    2015-01-01

    2-bromoethanesulfonate (BES) is a structural analogue of coenzyme M (Co-M) and potent inhibitor of methanogenesis. Several studies confirmed, BES can inhibit CH4 prodcution in rice soil, but the suppressing effectiveness of BES application on CH4 emission under rice cultivation has not been studied. In this pot experiment, different levels of BES (0, 20, 40 and 80 mg kg-1) were applied to study its effect on CH4 emission and plant growth during rice cultivation. Application of BES effectively suppressed CH4 emission when compared with control soil during rice cultivation. The CH4 emission rates were significantly (Price cultivation. A rice plant growth and yield parameters were not affected by BES application. The maximum CH4 reduction (49% reduction over control) was found at 80 mg kg-1 BES application during rice cultivation. It is, therefore, concluded that BES could be a suitable soil amendment for reducing CH4 emission without affecting rice plant growth and productivity during rice cultivation.

  20. Implications of Water Use and Water Scarcity Footprint for Sustainable Rice Cultivation

    Directory of Open Access Journals (Sweden)

    Thapat Silalertruksa

    2017-12-01

    Full Text Available Rice cultivation is a vital economic sector of many countries in Asia, including Thailand, with the well-being of people relying significantly on selling rice commodities. Water-intensive rice cultivation is facing the challenge of water scarcity. The study assessed the volumetric freshwater use and water scarcity footprint of the major and second rice cultivation systems in the Chao Phraya, Tha Chin, Mun, and Chi watersheds of Thailand. The results revealed that a wide range of freshwater use, i.e., 0.9–3.0 m3/kg of major rice and 0.9–2.3 m3/kg of second rice, and a high water use of rice was found among the watersheds in the northeastern region, like the Mun and Chi watersheds. However, the water scarcity footprint results showed that the second rice cultivation in watersheds, like in Chao Phraya and Tha Chin in the central region, need to be focused for improving the irrigation water use efficiency. The alternate wetting and drying (AWD method was found to be a promising approach for substituting the pre-germinated seed broadcasting system to enhance the water use efficiency of second rice cultivation in the central region. Recommendations vis-à-vis the use of the water stress index as a tool for agricultural zoning policy were also discussed.

  1. [CH4 emission features of leading super-rice varieties and their relationships with the varieties growth characteristics in Yangtze Delta of China].

    Science.gov (United States)

    Yan, Xiao-Jun; Wang, Li-Li; Jiang, Yu; Deng, Ai-Xing; Tian, Yun-Lu; Zhang, Wei-Jian

    2013-09-01

    A pot experiment was conducted to study the CH4 emission features of fourteen leading super-rice varieties (six Japonica rice varieties and eight Indica hybrid rice varieties) and their relationships with the varieties growth characteristics in Yangtze Delta. Two distinct peaks of CH4 emission were detected during the entire growth period of the varieties, one peak occurred at full-tillering stage, and the other appeared at booting stage. The average total CH4 emission of Japonica rice varieties was 37.6% higher than that of the Indica hybrid rice varieties (Price types occurred at the post-anthesis phase. For all the varieties, there was a significant positive correlation between the total CH4 emission and the maximum leaf area, but the correlations between the CH4 emission and the other growth characteristics varied with variety type. The total CH4 emission of Japonica rice varieties had a significant positive correlation with plant height, while the correlations between the total CH4 emission of Indica hybrid rice varieties and their plant height were not significant. The total CH4 emission of Indica hybrid rice varieties had significant negative correlations with the total aboveground biomass, grain yield, and harvest index, but the correlations were not significant for Japonica rice varieties. The lower CH4 emission of Indica hybrid rice varieties was likely due to their significantly higher root biomass, as compared with Japonica rice varieties.

  2. Resistance of Rice Varieties to the Stored-Product Insect, Sitophilus zeamais (Coleoptera: Curculionidae).

    Science.gov (United States)

    Antunes, Catarina; Mendes, Raquel; Lima, Arlindo; Barros, Graça; Fields, Paul; Da Costa, Luísa Beirão; Rodrigues, José Carlos; Silva, Maria José; Correia, Augusto Manuel; Carvalho, Maria Otilia

    2016-02-01

    Four common Portuguese rice varieties--Thaibonnet, Gladio, Albatros, and Eurosis--were tested for their relative susceptibility to Sitophilus zeamais Motschulsky, a common pest of stored rice in Portugal and in tropical countries. Physical (moisture content, hardness, length, and width) and chemical (by attenuated total reflection-Fourier transform infrared spectroscopy) properties of rice kernels were measured. Insect bioassays measured median developmental time, Dobie's index of susceptibility, percentage of damaged grains and weight loss, and progeny developed. This was done for paddy, brown rice, and polished rice for each variety. There were small, but significant, differences in insect resistance among the varieties. However, it was different for paddy and polished rice. In paddy, these differences were correlated with hull damage, and Eurosis was the most susceptible variety. In polished rice, resistance was correlated with hardness, and Thaibonnet was the most susceptible variety. In general, paddy rice was more resistant to insect attack, followed by polished rice and then brown rice. Paddy kernels selected with undamaged hull were completely resistant to attack. Implications for IPM and breeding for resistant varieties are discussed. © The Authors 2015. Published by Oxford University Press on behalf of Entomological Society of America. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

  3. Significance, progress and prospects for research in simplified cultivation technologies for rice in China.

    Science.gov (United States)

    Huang, M; Ibrahim, Md; Xia, B; Zou, Y

    2011-08-01

    Simplified cultivation technologies for rice have become increasingly attractive in recent years in China because of their social, economical and environmental benefits. To date, several simplified cultivation technologies, such as conventional tillage and seedling throwing (CTST), conventional tillage and direct seeding (CTDS), no-tillage and seedling throwing (NTST), no-tillage and direct seeding (NTDS) and no-tillage and transplanting (NTTP), have been developed in China. Most studies have shown that rice grown under each of these simplified cultivation technologies can produce a grain yield equal to or higher than traditional cultivation (conventional tillage and transplanting). Studies that have described the influences of agronomic practices on yield formation of rice under simplified cultivation have demonstrated that optimizing agronomy practices would increase the efficiencies of simplified cultivation systems. Further research is needed to optimize the management strategies for CTST, CTDS and NTST rice which have developed quickly in recent years, to strengthen basic research for those simplified cultivation technologies that are rarely used at present (such as NTTP and NTDS), to select and breed cultivars suitable for simplified cultivation and to compare the practicability and effectiveness of different simplified cultivation technologies in different rice production regions.

  4. Energy and environmental impact analysis of rice cultivation and straw management in northern Thailand.

    Science.gov (United States)

    Yodkhum, Sanwasan; Sampattagul, Sate; Gheewala, Shabbir H

    2018-04-17

    Rice cultivation and energy use for rice production can produce the environmental impacts, especially related to greenhouse gas (GHG) emissions. Also, rice straw open burning by farmers generally practiced after harvesting stage in Thailand for removing the residues in the rice field is associated with emissions of air pollutants, especially particulate matter formation that affects human health and global climate. This study assessed the environmental burdens, consisting of GHG emissions, energy use, and particulate matter formation (PM10), from rice cultivation in Thailand by life cycle assessment (LCA) and compared the environmental burdens of rice straw management scenarios: open burning, incorporation into soil, and direct combustion for electricity generation. The data were collected from the rice production cooperative in Chiang Mai province, northern Thailand, via onsite records and face-to-face questionnaires in 2016. The environmental impacts were evaluated from cradle-to-farm gate. The results showed that the total GHG emissions were 0.64 kg CO 2 -eq per kilogram of paddy rice, the total energy use was 1.80 MJ per kilogram of paddy rice and the PM10 emissions were 0.42 g PM10-eq per kilogram of paddy rice. The results of rice straw management scenarios showed that rice straw open burning had the highest GHG and PM10 emissions. However, rice straw utilization by incorporation into soil and direct combustion for electricity generation could reduce these impacts substantially.

  5. Consumer Acceptance and Preference Study (CAPS) on brown and undermilled Indian rice varieties in Chennai, India.

    Science.gov (United States)

    Sudha, Vasudevan; Spiegelman, Donna; Hong, Biling; Malik, Vasanti; Jones, Clara; Wedick, Nicole M; Hu, Frank B; Willett, Walter; Bai, Mookambika Ramya; Ponnalagu, Muthu Mariyammal; Arumugam, Kokila; Mohan, Viswanathan

    2013-01-01

    To study consumer acceptance of unmilled brown and undermilled rice among urban south Indians. Overweight and normal weight adults living in slum and nonslum residences in Chennai participated (n = 82). Bapatla (BPT) and Uma (red pigmented) rice varieties were chosen. These rice varieties were dehusked (unmilled, 0% polish) and further milled to 2.3% and 4.4% polishing (undermilled). Thus, 9 rice samples in both raw and parboiled forms were provided for consumer tasting over a period of 3 days. A 7-point hedonic scale was used to rate consumer preferences. A validated questionnaire was used to collect demographic, anthropometric, medical history, physical activity, dietary intake data, and willingness of the consumers to switch over to brown rice. Consumers reported that the color, appearance, texture, taste, and overall quality of the 4.4% polished rice was strongly preferred in both varieties and forms. Ratings for 0% polished (brown rice) were substantially lower than those of 2.3% polished rice, which were intermediate in ratings between 0% and 4.4% polishing. However, most of the consumers (93%) expressed a willingness to substitute brown or 2.3% polished rice, if affordable, after the taste tests and education on nutritional and health benefits of whole grains. Though most consumers preferred polished white rice, education regarding health benefits may help this population switch to brown or undermilled rice. Cooking quality and appearance of the grains were perceived as the most important factors to consider when purchasing rice among Chennai urban adults.

  6. Screening for Osmotic Stress Responses in Rice Varieties under Drought Condition

    Directory of Open Access Journals (Sweden)

    Simon Swapna

    2017-09-01

    Full Text Available Drought is the major abiotic stress factor that limits rice production worldwide. To evaluate the osmotic stress responses in rice varieties under drought condition, a total of 42 high-yielding rice varieties were collected from various research stations of Kerala Agricultural University in India. The experimental setup comprises of initial hydroponic treatments at different osmotic potentials, artificially induced by desired strengths of polyethylene glycol (PEG6000, and followed by the pot planted experiments in the rain-out-zone. The activities of antioxidant enzymes, relative water content, cell membrane stability, photosynthetic pigments, proline content, along with plant growth parameters of the varieties under drought condition were evaluated. Moreover, the standard scores of these rice varieties were assessed under stress and recovery conditions based on the scoring scale of the Standard Evaluation System for rice. Among the 42 rice varieties, we identified 2 rice varieties, Swarnaprabha and Kattamodan, with less leaf rolling, better drought recovery ability as well as relative water content, increased membrane stability index, osmolyte accumulation, and antioxidant enzyme activities pointed towards their degree of tolerance to drought stress. The positive adaptive responses of these rice varieties towards drought stress can be used in the genetic improvement of rice drought resistance breeding program.

  7. Screening for Osmotic Stress Responses in Rice Varieties under Drought Condition

    OpenAIRE

    Simon Swapna; Korukkanvilakath Samban Shylaraj

    2017-01-01

    Drought is the major abiotic stress factor that limits rice production worldwide. To evaluate the osmotic stress responses in rice varieties under drought condition, a total of 42 high-yielding rice varieties were collected from various research stations of Kerala Agricultural University in India. The experimental setup comprises of initial hydroponic treatments at different osmotic potentials, artificially induced by desired strengths of polyethylene glycol (PEG6000), and followed by the pot...

  8. Genetic diversity studies on selected rice varieties grown in Africa ...

    African Journals Online (AJOL)

    Rice grain quality is an important factor that has a great influence on its market value and consumer acceptance. It is determined by three parameters controlling the cooking and eating qualities of rice (amylose content, gelatinization temperature and gel consistency) and by the aroma, which becomes a criterion ...

  9. evaluation of nutrients status of soils under rice cultivation in cross ...

    African Journals Online (AJOL)

    CULTIVATION IN CROSS RIVER STATE, NIGERIA. I. N. ONYEKWERE, A. G. ... KEYWORDS: Evaluation, Nutrient status, Soils, Cross River. ... countries like India, Japan, Taiwan and South Korea. ... which the rice culture can be established.

  10. Effects of Bt-transgenic rice cultivation on planktonic communities in paddy fields and adjacent ditches

    International Nuclear Information System (INIS)

    Liu, Yongbo; Liu, Fang; Wang, Chao; Quan, Zhanjun; Li, Junsheng

    2016-01-01

    The non-target effects of transgenic plants are issues of concern; however, their impacts in cultivated agricultural fields and adjacent natural aquatic ecosystems are poorly understood. We conducted field experiments during two growing seasons to determine the effects of cultivating Bacillus thuringiensis (Bt)-transgenic rice on the phytoplankton and zooplankton communities in a paddy field and an adjacent ditch. Bt toxin was detected in soil but not in water. Water quality was not significantly different between non-Bt and Bt rice fields, but varied among up-, mid- and downstream locations in the ditch. Cultivation of Bt-transgenic rice had no effects on zooplankton communities. Phytoplankton abundance and biodiversity were not significantly different between transgenic and non-transgenic rice fields in 2013; however, phytoplankton were more abundant in the transgenic rice field than in the non-transgenic rice field in 2014. Water quality and rice type explained 65.9% and 12.8% of this difference in 2014, respectively. Phytoplankton and zooplankton were more abundant in mid- and downstream, than upstream, locations in the ditch, an effect that we attribute to water quality differences. Thus, the release of Bt toxins into field water during the cultivation of transgenic crops had no direct negative effects on plankton community composition, but indirect effects that alter environmental conditions should be taken into account during the processes of management planning and policymaking. - Highlights: • We detect fusion Cry1Ab/1Ac proteins from Bt rice entering into aquatic ecosystems. • Bt-transgenic rice cultivation have no significant effect on zooplankton community. • Bt-transgenic rice cultivation have indirect effect on phytoplankton community. • Water quality explains the difference of plankton communities in adjacent ditches.

  11. Effects of Bt-transgenic rice cultivation on planktonic communities in paddy fields and adjacent ditches

    Energy Technology Data Exchange (ETDEWEB)

    Liu, Yongbo, E-mail: liuyb@craes.org.cn [State Key Laboratory of Environmental Criteria and Risk Assessment, Chinese Research Academy of Environmental Sciences, Beijing 100012 (China); Liu, Fang [State Key Laboratory of Environmental Criteria and Risk Assessment, Chinese Research Academy of Environmental Sciences, Beijing 100012 (China); Wang, Chao [Pearl River Fisheries Research Institute, Chinese Academy of Fishery Science, Guangzhou 510380 (China); Quan, Zhanjun [State Key Laboratory of Environmental Criteria and Risk Assessment, Chinese Research Academy of Environmental Sciences, Beijing 100012 (China); Li, Junsheng, E-mail: lijsh@creas.org.cn [State Key Laboratory of Environmental Criteria and Risk Assessment, Chinese Research Academy of Environmental Sciences, Beijing 100012 (China)

    2016-09-15

    The non-target effects of transgenic plants are issues of concern; however, their impacts in cultivated agricultural fields and adjacent natural aquatic ecosystems are poorly understood. We conducted field experiments during two growing seasons to determine the effects of cultivating Bacillus thuringiensis (Bt)-transgenic rice on the phytoplankton and zooplankton communities in a paddy field and an adjacent ditch. Bt toxin was detected in soil but not in water. Water quality was not significantly different between non-Bt and Bt rice fields, but varied among up-, mid- and downstream locations in the ditch. Cultivation of Bt-transgenic rice had no effects on zooplankton communities. Phytoplankton abundance and biodiversity were not significantly different between transgenic and non-transgenic rice fields in 2013; however, phytoplankton were more abundant in the transgenic rice field than in the non-transgenic rice field in 2014. Water quality and rice type explained 65.9% and 12.8% of this difference in 2014, respectively. Phytoplankton and zooplankton were more abundant in mid- and downstream, than upstream, locations in the ditch, an effect that we attribute to water quality differences. Thus, the release of Bt toxins into field water during the cultivation of transgenic crops had no direct negative effects on plankton community composition, but indirect effects that alter environmental conditions should be taken into account during the processes of management planning and policymaking. - Highlights: • We detect fusion Cry1Ab/1Ac proteins from Bt rice entering into aquatic ecosystems. • Bt-transgenic rice cultivation have no significant effect on zooplankton community. • Bt-transgenic rice cultivation have indirect effect on phytoplankton community. • Water quality explains the difference of plankton communities in adjacent ditches.

  12. Impact of Improved Rice Variety on Productivity Among Smallholder Farmers in Ghana

    Directory of Open Access Journals (Sweden)

    Edward Tsinigo

    2017-02-01

    Full Text Available Advancement in agricultural technologies is seen to result in the shift in production functions. The study was conducted to establish the impact of the improved rice variety on productivity in the Ejura-Sekyedumase and Atebubu-Amantin Municipalities of Ghana. The study was based on the survey of 208 rice farmers using a three-stage stratified sampling method. The study used a structured questionnaire to collect input-output data from the rice farmers. Data were analysed using the Cobb-Douglas production function. The study found that the technical change associated with the introduction of the improved rice variety was of the non-neutral type. Further, the adoption of the improved rice variety has increased rice productivity by about 46% for the adopters. The main determinants of productivity for the adopters were seed, land, fertiliser, herbicide, and education. Productivity among the non-adopters was positively influenced by seed, land, herbicide, and fertiliser. The study concluded that the improved rice variety has superior yield advantage. The study recommends for the simultaneous promotion of improved rice varieties and their recommended inputs to increase rice productivity.

  13. [Performance of rice varieties in making bread without gluten].

    Science.gov (United States)

    Torres, R L; González, R J; Sánchez, H D; Osella, C A; de la Torre, M A

    1999-06-01

    The objective of this work was the evaluation of the technological behavior of seven rice genotypes, using a baking test for bread without gluten, and taking account the influence of particle size and physicochemical properties of the rice on the technological aptitude to produce the bread. Total and insoluble amylose content and hydration were used to make its relationship with bread quality. The genotypes Rico and H-144-7 have contributed to give the best results at baking test while waxy rices gave the lower quality bread. Also we emphasize that a certain relationships can be assumed between hydration and insoluble amylose content with the organoleptic evaluation of breads.

  14. Evaluation of nutrients status of soils under rice cultivation in cross ...

    African Journals Online (AJOL)

    Nutrients status of soils under rice cultivation in Cross River State Nigeria was evaluated to ascertain the present status and suggest management practices needed for an increased rice production. A reconnaissance survey of the entire State was undertaken. A total number of eight Local Government Areas, namely ...

  15. Effective Suppression of Methane Emission by 2-Bromoethanesulfonate during Rice Cultivation

    NARCIS (Netherlands)

    Waghmode, Tatoba R.; Haque, Md Mozammel; Kim, Sang Yoon; Kim, Pil Joo

    2015-01-01

    2-bromoethanesulfonate (BES) is a structural analogue of coenzyme M (Co-M) and potent inhibitor of methanogenesis. Several studies confirmed, BES can inhibit CH4 prodcution in rice soil, but the suppressing effectiveness of BES application on CH4 emission under rice cultivation has not been studied.

  16. Genetic diversity studies on selected rice varieties grown in Africa ...

    African Journals Online (AJOL)

    Tuoyo Aghomotsegin

    similarity was observed between traditional aromatic rice Basmati 370 and the landrace Gambiaka. Nigeria. .... inheritance, abundance and extensive genome coverage ... market value, 4 landraces Gambiaka well spread in Africa, TS2 a.

  17. Response of Transplanted Aman Rice Varieties to Herbicides in Strip-Tilled Non-Puddled Soil

    Directory of Open Access Journals (Sweden)

    Taslima Zahan1

    2017-12-01

    Full Text Available BACKGROUND: Sensitivity of crop cultivars may vary to commonly used herbicides resulting in potential yield loss and reduce farm profit. Transplanting of rice seedlings in strip-tilled non-puddled field is a new practice for which herbicide tolerant varieties need to select. Therefore, a study was executed at the Agronomy Field Laboratory of Bangladesh Agricultural University, Mymensingh during 2013 to evaluate the response of some popular transplanted aman rice varieties to different herbicides at their recommended rate and to select most tolerant aman rice variety or varieties for strip-tilled non-puddled transplanting. METHODOLOGY: Twelve aman rice varieties (BR11, BRRI dhan33, BRRI dhan39, BRRI dhan44, BRRI dhan46, BRRI dhan49, BRRI dhan51, BRRI dhan52, BRRI dhan56, BRRI dhan57, BRRI hybrid dhan-4 and BINA dhan7 were examined in the study against six herbicides (2 pre-emergence: pyrazosulfuron-ethyl and butachlor; 1 early post-emergence: orthosulfamuron and 3 late post-emergence: acetochlor + bensulfuron methyl, butachlor + propanil and 2,4-D amine along with one untreated manually weed-free control. KEY FINDINGS: The study revealed that aman rice varieties responded differentially to different herbicides. All rice varieties performed better in pyrazosulfuron-ethyl treated plots relative to the other herbicide treated plots and even than the control plots. Pyrazosulfuron-ethyl increased grain yield of all aman rice varieties by 0.6-32.6% over control and butachlor + propanil provided increased grain yield in all rice varieties by 2.0-25.5% except BRRI hybrid dhan-4. The study also disclosed that BRRI dhan57 and BRRI hybrid dhan-4 gone through the yield loss by application of 2,4-D amine and BRRI dhan56 by application of butachlor and orthosulfamuron. Moreover, acetochlor + bensulfuron methyl produced shorter plants and caused yield loss by 7.8-27.1% in all aman rice varieties compared to the control and BRRI dhan39 was the most susceptible

  18. Comparison study of genetic diversity between rice varieties from northeast China and Japan

    International Nuclear Information System (INIS)

    Li Hongyu; Wang Haize; Zhang Longhai; Liu Menghong; Xu Zhengjin; Zhao Minghui; Xu Hai; Wang Jiayu; Si Yang

    2011-01-01

    The genetic diversity of 18 rice varieties from northeast China and 13 rice varieties from Japan were investigated by 20 phenotypic traits and SSR assay with 40 pairs of primers. The results showed that 82 phenotypic variation and 108 alleles were detected. With an average of 2.54 alleles on every locus the phenotypic variation and alleles in northeast China were 72 and 103, respectively, and 63 and 94 were respectively with an average of 2.32 alleles on every locus in Japanese varieties. Genetic variation among different varieties varied greatly and among different groups varied slightly. Genetic diversity of varieties in northeast China was much higher than those in Japan, and 94.7% of the alleles from Japanese varieties were included in the varieties from northeast China. The available specific alleles were already very limited in the varieties from Japan and can not meet the rice breeding requirements for northeastern China. (authors)

  19. Effect of fertiliser on functional properties of flour from four rice varieties grown in Sri Lanka.

    Science.gov (United States)

    Gunaratne, Anil; Sirisena, Nihal; Ratnayaka, Upul Kumari; Ratnayaka, Jennet; Kong, Xiangli; Vidhana Arachchi, Lal Peruma; Corke, Harold

    2011-05-01

    Fertiliser is an essential agro-chemical input in modern rice farming. Fertiliser affects the grain quality and yield of rice. Although much research has been carried out to investigate the influence of fertiliser (recommended NPK addition) on yield and quality of rice grain, little is known about the effect of fertiliser on thermal, pasting, gelling and retrogradation properties of rice flour. The aim of this study was to investigate the influence of recommended fertilisation on functional properties of rice flour from four popular high yielding rice varieties grown in Sri Lanka. Fertiliser (recommended NPK addition) increased the protein content but reduced the apparent amylose content in rice flour except in BG 357. Swelling power and amylose leaching were decreased by fertilizer. [corrected] Pasting onset temperature, cold paste viscosity and setback were increased but peak viscosity and granular breakdown decreased. In response to the fertiliser application, gelatinisation peak temperature was reduced in all varieties except BG 300. However, compared to pasting properties, gelatinisation parameters were not much affected by fertilisation. The extent of amylopectin retrogradation was decreased by fertiliser in BG 305 and BG 352 but unchanged in the other two varieties. Except in BG 305, fertiliser reduced the gel hardness of rice flour but increased the gel cohesiveness. It is apparent that the increased protein and reduced amylose content caused by fertiliser affect the functional properties of rice flour. Copyright © 2011 Society of Chemical Industry.

  20. Symbiont-mediated adaptation by planthoppers and leafhoppers to resistant rice varieties

    NARCIS (Netherlands)

    Ferrater, J.B.; Jong, de P.W.; Dicke, M.; Chen, Y.H.; Horgan, F.G.

    2013-01-01

    For over 50 years, host plant resistance has been the principal focus of public research to reduce planthopper and leafhopper damage to rice in Asia. Several resistance genes have been identified from native varieties and wild rice species, and some of these have been incorporated into high-yielding

  1. Physicochemical and sensory analysis of USA rice varieties developed for the basmati and jasmine markets

    Science.gov (United States)

    There is a steady demand for imported basmati and jasmine rice in The USA. Rice varieties that can be domestically produced and compete with these imports, have been developed from basmati, jasmine, and other aromatic germplasm sources. This study evaluated differences among eight USA aromatic varie...

  2. Characterization of High-Value Bioactives in Some Selected Varieties of Pakistani Rice (Oryza sativa L.)

    Science.gov (United States)

    Zubair, Muhammad; Anwar, Farooq; Ashraf, Muhammad; Uddin, Md. Kamal

    2012-01-01

    The present study reports the composition and variation of fatty acids, sterols, tocopherols and γ-oryzanol among selected varieties namely Basmati Super, Basmati 515, Basmati 198, Basmati 385, Basmati 2000, Basmati 370, Basmati Pak, KSK-139, KS-282 and Irri-6 of Pakistani rice (Oryza sativa L). Oil content extracted with n-hexane from different varieties of brown rice seed (unpolished rice) ranged from 1.92% to 2.72%. Total fatty acid contents among rice varieties tested varied between 18240 and 25840 mg/kg brown rice seed. The rice tested mainly contained oleic (6841–10952 mg/kg) linoleic (5453–7874 mg/kg) and palmitic acid (3613–5489 mg/kg). The amounts of total phytosterols (GC and GC-MS analysis), with main contribution from β-sitosterol (445–656 mg/kg), campesterol (116–242 mg/kg), Δ5-avenasterol (89–178 mg/kg) and stigmasterol (75–180 mg/kg) were established to be 739.4 to 1330.4 mg/kg rice seed. The content of α-, γ- and δ-tocopherols as analyzed by HPLC varied from 39.0–76.1, 21.6–28.1 and 6.5–16.5 mg/kg rice seed, respectively. The amounts of different γ-oryzanol components (HPLC data), identified as cycloartenyl ferulate, 24-methylene cycloartanyl ferulate, campesteryl ferulate and β-sitosteryl ferulate, were in the range of 65.5–103.6, 140.2–183.1, 29.8–45.5 and 8.6–10.4 mg/kg rice seed, respectively. Overall, the concentration of these bioactives was higher in the Basmati rice cultivars showing their functional food superiority. In conclusion, the tested varieties of Pakistani rice, especially the Basmati cultivars, can provide best ingredients for functional foods. PMID:22605998

  3. Characterization of High-Value Bioactives in Some Selected Varieties of Pakistani Rice (Oryza sativa L.

    Directory of Open Access Journals (Sweden)

    Md. Kamal Uddin

    2012-04-01

    Full Text Available The present study reports the composition and variation of fatty acids, sterols, tocopherols and γ-oryzanol among selected varieties namely Basmati Super, Basmati 515, Basmati 198, Basmati 385, Basmati 2000, Basmati 370, Basmati Pak, KSK-139, KS-282 and Irri-6 of Pakistani rice (Oryza sativa L. Oil content extracted with n-hexane from different varieties of brown rice seed (unpolished rice ranged from 1.92% to 2.72%. Total fatty acid contents among rice varieties tested varied between 18240 and 25840 mg/kg brown rice seed. The rice tested mainly contained oleic (6841–10952 mg/kg linoleic (5453–7874 mg/kg and palmitic acid (3613–5489 mg/kg. The amounts of total phytosterols (GC and GC-MS analysis, with main contribution from β-sitosterol (445–656 mg/kg, campesterol (116–242 mg/kg, ∆5-avenasterol (89–178 mg/kg and stigmasterol (75–180 mg/kg were established to be 739.4 to 1330.4 mg/kg rice seed. The content of α-, γ- and δ-tocopherols as analyzed by HPLC varied from 39.0–76.1, 21.6–28.1 and 6.5–16.5 mg/kg rice seed, respectively. The amounts of different γ-oryzanol components (HPLC data, identified as cycloartenyl ferulate, 24-methylene cycloartanyl ferulate, campesteryl ferulate and β-sitosteryl ferulate, were in the range of 65.5–103.6, 140.2–183.1, 29.8–45.5 and 8.6–10.4 mg/kg rice seed, respectively. Overall, the concentration of these bioactives was higher in the Basmati rice cultivars showing their functional food superiority. In conclusion, the tested varieties of Pakistani rice, especially the Basmati cultivars, can provide best ingredients for functional foods.

  4. Comparative transcriptome analysis of two rice varieties in response to rice stripe virus and small brown planthoppers during early interaction.

    Directory of Open Access Journals (Sweden)

    Wenjing Zheng

    Full Text Available Rice stripe, a virus disease, transmitted by a small brown planthopper (SBPH, has greatly reduced production of japonica rice in East Asia, especially in China. Although we have made great progress in mapping resistance genes, little is known about the mechanism of resistance. By de novo transcriptome assembling, we gained sufficient transcript data to analyze changes in gene expression of early interaction in response to SBPH and RSV infection in rice. Respectively 648 and 937 DEGs were detected from the disease-resistant (Liaonong 979 and the susceptible (Fengjin varieties, most of which were up-regulated. We found 37 genes related to insect resistance, which mainly included genes for jasmonate-induced protein, TIFY protein, lipoxygenase, as well as trypsin inhibitor genes and transcription factor genes. In the interaction process between RSV and rice, 87 genes were thought to be related to RSV resistance; these primarily included 12 peroxidase biosynthesis genes, 12 LRR receptor-like protein kinase genes, 6 genes coding pathogenesis-related proteins, 4 glycine-rich cell wall structural protein genes, 2 xyloglucan hydrolase genes and a cellulose synthase. The results indicate that the rice-pathogen interaction happened both in disease-resistant and susceptible varieties, and some genes related to JA biosynthesis played key roles in the interaction between SBPHs and rice. When rice was infected by RSV a hypersensitive reaction (HR in the disease-resistant variety was suppressed, which resulted from an increase in peroxidase expression and down-regulation of LRR receptor-like protein kinase and pathogenesis-related proteins, while, the changes of peroxidase biosynthesis, glycine-rich cell wall structural protein, cellulose synthase and xyloglucan endotransglucosylase/hydrolase could lead to the strengthening of physical barriers of rice, which may be an important resistance mechanism to RSV in rice.

  5. Comparative transcriptome analysis of two rice varieties in response to rice stripe virus and small brown planthoppers during early interaction.

    Science.gov (United States)

    Zheng, Wenjing; Ma, Li; Zhao, Jiaming; Li, Zhiqiang; Sun, Fuyu; Lu, Xiaochun

    2013-01-01

    Rice stripe, a virus disease, transmitted by a small brown planthopper (SBPH), has greatly reduced production of japonica rice in East Asia, especially in China. Although we have made great progress in mapping resistance genes, little is known about the mechanism of resistance. By de novo transcriptome assembling, we gained sufficient transcript data to analyze changes in gene expression of early interaction in response to SBPH and RSV infection in rice. Respectively 648 and 937 DEGs were detected from the disease-resistant (Liaonong 979) and the susceptible (Fengjin) varieties, most of which were up-regulated. We found 37 genes related to insect resistance, which mainly included genes for jasmonate-induced protein, TIFY protein, lipoxygenase, as well as trypsin inhibitor genes and transcription factor genes. In the interaction process between RSV and rice, 87 genes were thought to be related to RSV resistance; these primarily included 12 peroxidase biosynthesis genes, 12 LRR receptor-like protein kinase genes, 6 genes coding pathogenesis-related proteins, 4 glycine-rich cell wall structural protein genes, 2 xyloglucan hydrolase genes and a cellulose synthase. The results indicate that the rice-pathogen interaction happened both in disease-resistant and susceptible varieties, and some genes related to JA biosynthesis played key roles in the interaction between SBPHs and rice. When rice was infected by RSV a hypersensitive reaction (HR) in the disease-resistant variety was suppressed, which resulted from an increase in peroxidase expression and down-regulation of LRR receptor-like protein kinase and pathogenesis-related proteins, while, the changes of peroxidase biosynthesis, glycine-rich cell wall structural protein, cellulose synthase and xyloglucan endotransglucosylase/hydrolase could lead to the strengthening of physical barriers of rice, which may be an important resistance mechanism to RSV in rice.

  6. Pollination requirements of seeded and seedless mini watermelon varieties cultivated under protected environment

    Directory of Open Access Journals (Sweden)

    Isac Gabriel Abrahão Bomfim

    2015-01-01

    Full Text Available The objective of this work was to evaluate the floral biology and pollination requirements of seeded and seedless mini watermelon varieties, and to determine the best varieties to cultivate under protected environment. Three seedless (HA-5106, HA-5158, and HA-5161 and two seeded (Minipol and Polimore genotypes were tested. Flowers were monitored from the pre-anthesis stage to senescence, and fruit quality was also evaluated. The evaluated treatments were hand-geitonogamous pollination (MG, cross-pollination with pollen from the Polimore variety (MCP, cross-pollination with pollen from the Minipol variety (MCM, and restricted pollination. All varieties had monoecious plants with diclinous flowers, and the stigmas remained receptive throughout anthesis. Fruit set rates of 84.62% (MG, 61.54% (MCP, 48% (MCM, and 0% (restricted were obtained for seeded varieties, but of 0% (MG, 76.36% (MCP, 82.69% (MCM, and 0% (restricted for seedless varieties. Fruits did not differ in quality among treatments within each genotype. Therefore, all the studied varieties require a pollination agent and diploid pollen for fruit set to occur, regardless of the donor variety; and Minipol or Polimore with HA-5106 or HA-5158 are the varieties recommended for cultivation in protected environment.

  7. Phosphorus critical levels and availability in lowland soils cultivated with flooded rice

    Directory of Open Access Journals (Sweden)

    Mariano Isabela Orlando dos Santos

    2002-01-01

    Full Text Available Lowland soils present a great potential for the flooded rice crop. This work aimed to estimate critical levels of P in waterlogged soils cultivated with rice using Mehlich 1 and anion exchange resin as soil-P extractors, compare the performance of these extractors as for the evaluation of the P availability, and study the soil-P fractions involved in the P nutrition of the rice crop. Studied soils consisted of four Histosols: Low Humic Gley (GP, Aluvial (A, Humic Gley (GH and Bog Soil (O which were previously cultivated with beans. The experimental design was completely randomized, in a factorial scheme, using four soils, five P rates (75, 150, 300, 500 and 800 mg dm-3 and two liming treatments (with and without liming, with three replicates. After 60 days of flooding, soil samples were submitted to P extraction by Mehlich 1 and resin, and phosphorous fractionation. Two rice plants were cultivated in pots containing 3 dm³ of waterlogged soils. The labile P and the moderately labile P of the soils contributed for rice nutrition. The two tested extractors presented efficiency in the evaluation of P availability for the rice cultivated in lowland waterlogged soils.

  8. Japonica rice variety Yangfujing 7 bred by mutation

    International Nuclear Information System (INIS)

    He Zhentian; Chen Xiulan; Han Yuepeng; Wang Jinrong; Yang Hefeng; Wang Jianhua

    2006-01-01

    A japonica variety, Yangfujing 7, which possessing high yield potential, good quality and disease resistance was developed through cross breeding combined mutation breeding. The variety met the needs of agricultural environment in Jiangsu province. (authors)

  9. Morphological Variation of Six Pigmented Rice Local Varieties Grown in Organic Rice Field in Sengguruh Village, Kepanjen District, Malang Regency

    Directory of Open Access Journals (Sweden)

    Shinta

    2014-05-01

    Full Text Available Indonesia is the third richest country for pigmented rice source such as Wojalaka black rice of East Nusa Tenggara (NTT, Manggarai of NTT, Toraja of South Sulawesi, Cempo Ireng of Central Java and red rice of Aek Sibundong (leading variety and Baubau of Southeast Sulawesi. However, the morphological character of pigmented rice in Indonesia is less reported. The objective of research was to compare the morphological variation of root, stem, leaf, panicle, floret and the colour of milk mature grain and mature grain by observing the vegetative and generative parts of six local rice varieties. Research had been conducted from February 2012 to February 2014 in Sengguruh Village, Kepanjen District, Malang Regency. This study type was quasi-experiment with eleven replications. Group Random Design was used. The observation was given upon vegetative, reproductive and maturity phases as groups. Independent variables in this study were six rice varieties, while the dependent variable was morphological variation (root, stem, leaf, panicle, floret, milk mature grain and mature grain. The analysis of multivariate data in cluster and bip lot was carried out with PAST. The result of the study indicated that there was morphological difference on stem, leaf, panicle, floret, milk mature grain and mature grain. The colour of the stem in Aek Sibundong variety was purple, while that of other varieties was green. Toraja and Manggarai varieties had the highest height with 163-168 cm, followed by Cempo Ireng with 139 cm, Wojalaka and Baubau with 110-112 cm. Aek Sibundong Variety had the lowest height with 99 cm. Aek Sibundong and Wojalaka varieties had 6-7 internodes which were the greatest number of internode, while other varieties only had 4-5 internodes. Some varieties, such as Aek Sibundong, Wojalaka and Baubau had short and small leaf. The leaflet angle of Aek Sibundong and Baubau were 14o and it might be said as upright, while that of Wojalaka was 43o or moderate

  10. Antioxidant capacity and total polyphenol content in different apple varieties cultivated in Chile

    OpenAIRE

    Quitral, Vilma; Sepulveda, Marcela; Schwartz, Marco; Kern, Werther

    2014-01-01

    Three apple varieties cultivated in Chile were studied in total polyphenol content by Folin Ciocalteu method and antioxidant capacity by FRAP method: Granny Smith, Royal Gala and Fuji (whole and peeled apples). The total polyphenol content in whole and peeled apples do not show significant differences. The antioxidant capacity of the Granny Smith variety is significantly higher than Royal Gala and Fuji. Apple dehydration at 60 oC for 4 hours to obtain flakes keeps polyphenol content high. The...

  11. Mechanism and capacities of reducing ecological cost through rice-duck cultivation.

    Science.gov (United States)

    Long, Pan; Huang, Huang; Liao, Xiaolan; Fu, Zhiqiang; Zheng, Huabin; Chen, Aiwu; Chen, Can

    2013-09-01

    Rice-duck cultivation is the essence of Chinese traditional agriculture. A scientific assessment of the mechanism and its capacity is of theoretical significance and practical value in improving modern agricultural technology. The duck's secretions, excreta and their treading, pecking and predation decrease the occurrence of plant diseases, pests and weeds, enrich species diversity and improve the field environment. The rice-duck intergrowth system effectively prevents rice planthoppers and rice leafhoppers. The control effects can be up to 98.47% and 100% respectively; it also has effects on the control of Chilo suppressalis, Tryporyza incertulas and the rice leafrollers. Notable control results are found on sheath blight, while the effects on other diseases are about 50%. Harm from weeds is placed under primary control; prevention of weeds is sequenced by broadleaf weeds > sedge weeds > Gramineae weeds. Contents of soil organic matter, N, P and K are improved by the system; nutrient utilization is accelerated, resulting in decreased fertilizer application. Greenhouse gas emissions are reduced by 1-2% and duck fodder is saved in this system. There is also an obvious economic benefit. Compared to conventional rice cultivation, rice-duck cultivation shows great benefits to ecologic cost and economic income. © 2013 The Authors. Journal of the Science of Food and Agriculture published by John Wiley & Sons Ltd on behalf of Society of Chemical Industry.

  12. Enhancing the fertility of an acid sulfate soil for rice cultivation using lime in combination with bio-organic fertilizer

    International Nuclear Information System (INIS)

    Farhana, A.; Shamshuddin, J.; Fauziah, C.I.; Panhwar, Q.A.

    2017-01-01

    The acid sulfate soils contain pyrite (FeS/sub 2/) which is due to oxidation results in the production of high amount of acidity, aluminum and iron significantly affecting rice growth. A glasshouse study was arranged to determine the effect of ground magnesium limestone (GML) in combination with bio-organic fertilizer (JITUTM) application on the chemical properties of soils and rice yield. Three rice seedlings were transplanted in pots which were previously amended with 0, 2, 4, 6 and 8 t/ha GML with or without bio-organic fertilizer. The common rice varieties (MR 219 and MR 253) were cultivated for two seasons in the same pots. The critical Fe2+ and Al3+ activities for MR 219 were 14.45 and 4.23 mu M, while for MR 253 were 7.45 and 5.53 mu M, respectively. However, without applying the amendments, rice grown on the soils was affected severely by the high acidity (Fe2+ and Al3+ toxicity). The soil pH increased to 5 and the higher grain yield of MR 219 (99.77 and 121.38 g/pot) and MR253 (98.63 and 112.60 g/pot) was in first and second season with the application of 2 t GML application combined with 0.25 t JITUTM/ha respectively. In addition, 1000 grain weight, number of panicle, number of spikelets panicle-1 and the percentage of filled spikelet, were also higher than without the soil amendments. Hence, the infertility of acid sulfate soils for sustainable rice cultivation in Malaysia can be improved by applying 2 t GML/ha combined with 0.25 t JITUTM/ha for two seasons in long run. (author)

  13. Assessment of the quality of bran and bran oil produced from some Egyptian rice varieties.

    Science.gov (United States)

    Salem, Eglal G; El Hissewy, Ahmed; Agamy, Neveen F; Abd El Barry, Doaa

    2014-04-01

    Rice (Oryza sativa L.) is one of the leading food crops of the world, the staple food of over half the world's population. The bran, which is an important byproduct obtained during rice milling, constitutes about 1/10 of the weight of the rice grain. Rice bran is the outer brown layer including the rice germ that is removed during the milling process of brown grain. This milling byproduct is reported to be high in natural vitamins and minerals, particularly vitamin E. The present study was conducted to determine the chemical composition of bran and bran oil of 13 different rice varieties commonly produced in Egypt, to study the utilization of rice bran in bread production, and to assess the quality and acceptance of the rice bran edible oil produced. Rice bran was produced from 13 Egyptian varieties of recently harvested rice as well as from paddy rice stored for 1 year. The extracted bran was immediately stabilized then subjected to chemical analysis (such as moisture content, protein, fat, carbohydrates, fiber, and ash) as well as trace and heavy metals determination (P, K, Na, Ca, Fe, Zn, Cu, and Mg). Bread was produced by adding Giza172 rice bran at three different concentrations to wheat flour then subjected to chemical analysis, caloric content, and organoleptic examination. Bran oil was extracted from the different varieties of rice bran (recently harvested and stored) then subjected to chemical and organoleptic examinations as well as vitamin E and oryzanol determination. The percentage of rice bran of newly harvested Egyptian rice was 11.68% and was 10.97% in stored rice. The analysis showed mean values of 5.91 and 5.53% for moisture, 14.60 and 14.40% for crude protein, 14.83 and 15.20% for fat, 44.77 and 45.40% for carbohydrates, 6.55 and 7.06% for crude fiber, and 8.87 and 8.50% for ash for newly harvested and stored rice bran, respectively. Bread containing 15% rice bran showed the highest score percentages for organoleptic quality compared with the

  14. New approach to increasing rice lodging resistance and biomass yield through the use of high gibberellin producing varieties.

    Directory of Open Access Journals (Sweden)

    Ayako Okuno

    Full Text Available Traditional breeding for high-yielding rice has been dependent on the widespread use of fertilizers and the cultivation of gibberellin (GA-deficient semi-dwarf varieties. The use of semi-dwarf plants facilitates high grain yield since these varieties possess high levels of lodging resistance, and thus could support the high grain weight. Although this approach has been successful in increasing grain yield, it is desirable to further improve grain production and also to breed for high biomass. In this study, we re-examined the effect of GA on rice lodging resistance and biomass yield using several GA-deficient mutants (e.g. having defects in the biosynthesis or perception of GA, and high-GA producing line or mutant. GA-deficient mutants displayed improved bending-type lodging resistance due to their short stature; however they showed reduced breaking-type lodging resistance and reduced total biomass. In plants producing high amounts of GA, the bending-type lodging resistance was inferior to the original cultivars. The breaking-type lodging resistance was improved due to increased lignin accumulation and/or larger culm diameters. Further, these lines had an increase in total biomass weight. These results show that the use of rice cultivars producing high levels of GA would be a novel approach to create higher lodging resistance and biomass.

  15. New approach to increasing rice lodging resistance and biomass yield through the use of high gibberellin producing varieties.

    Science.gov (United States)

    Okuno, Ayako; Hirano, Ko; Asano, Kenji; Takase, Wakana; Masuda, Reiko; Morinaka, Yoichi; Ueguchi-Tanaka, Miyako; Kitano, Hidemi; Matsuoka, Makoto

    2014-01-01

    Traditional breeding for high-yielding rice has been dependent on the widespread use of fertilizers and the cultivation of gibberellin (GA)-deficient semi-dwarf varieties. The use of semi-dwarf plants facilitates high grain yield since these varieties possess high levels of lodging resistance, and thus could support the high grain weight. Although this approach has been successful in increasing grain yield, it is desirable to further improve grain production and also to breed for high biomass. In this study, we re-examined the effect of GA on rice lodging resistance and biomass yield using several GA-deficient mutants (e.g. having defects in the biosynthesis or perception of GA), and high-GA producing line or mutant. GA-deficient mutants displayed improved bending-type lodging resistance due to their short stature; however they showed reduced breaking-type lodging resistance and reduced total biomass. In plants producing high amounts of GA, the bending-type lodging resistance was inferior to the original cultivars. The breaking-type lodging resistance was improved due to increased lignin accumulation and/or larger culm diameters. Further, these lines had an increase in total biomass weight. These results show that the use of rice cultivars producing high levels of GA would be a novel approach to create higher lodging resistance and biomass.

  16. Resequencing 50 accessions of cultivated and wild rice yields markers for identifying agronomically important genes

    DEFF Research Database (Denmark)

    Xu, Xun; Liu, Xin; Ge, Song

    2012-01-01

    Rice is a staple crop that has undergone substantial phenotypic and physiological changes during domestication. Here we resequenced the genomes of 40 cultivated accessions selected from the major groups of rice and 10 accessions of their wild progenitors (Oryza rufipogon and Oryza nivara) to >15 x...... diversity in cultivated but not wild rice, which represent candidate regions selected during domestication. Some of these variants are associated with important biological features, whereas others have yet to be functionally characterized. The molecular markers we have identified should be valuable...... raw data coverage. We investigated genome-wide variation patterns in rice and obtained 6.5 million high-quality single nucleotide polymorphisms (SNPs) after excluding sites with missing data in any accession. Using these population SNP data, we identified thousands of genes with significantly lower...

  17. Absorption and translocation of 15N in Japonica (Hinohikari) and Indica (Hadsaduri) rice varieties

    International Nuclear Information System (INIS)

    Islam, N.; Inagaki, S.; Chishaki, N.; Horiguchi, T.

    1997-01-01

    The absorption and translocation of 15 N-labeled nitrogen (N) applied as three N levels of ammonium nitrate at the stages of panicle initiation (PI) and heading (HD) were compared between a japonica rice variety (var. Hinohikari) and a tall indica rice variety (var. Hadsaduri) by growing them hydroponically. With the supply of low N level, 15 N absorption by the japonica variety was larger, but at medium and high N levels, the tall indica variety absorbed larger amounts of 15 N at both stages. However, the amount of 15 N partitioned to the panicles at maturity was considerably smaller in the indica variety, since dry matter allocation to the panicles was also smaller in this variety. The tall indica variety showed a considerable loss of 15 N from heading to maturity at the high N-level unlike the japonica variety. (author)

  18. Transgenerational variations in DNA methylation induced by drought stress in two rice varieties with distinguished difference to drought resistance.

    Directory of Open Access Journals (Sweden)

    Xiaoguo Zheng

    Full Text Available Adverse environmental conditions have large impacts on plant growth and crop production. One of the crucial mechanisms that plants use in variable and stressful natural environments is gene expression modulation through epigenetic modification. In this study, two rice varieties with different drought resistance levels were cultivated under drought stress from tilling stage to seed filling stage for six successive generations. The variations in DNA methylation of the original generation (G0 and the sixth generation (G6 of these two varieties in normal condition (CK and under drought stress (DT at seedling stage were assessed by using Methylation Sensitive Amplification Polymorphism (MSAP method. The results revealed that drought stress had a cumulative effect on the DNA methylation pattern of both varieties, but these two varieties had different responses to drought stress in DNA methylation. The DNA methylation levels of II-32B (sensitive and Huhan-3 (resistant were around 39% and 32%, respectively. Genome-wide DNA methylation variations among generations or treatments accounted for around 13.1% of total MSAP loci in II-32B, but was only approximately 1.3% in Huhan-3. In II-32B, 27.6% of total differentially methylated loci (DML were directly induced by drought stress and 3.2% of total DML stably transmitted their changed DNA methylation status to the next generation. In Huhan-3, the numbers were 48.8% and 29.8%, respectively. Therefore, entrainment had greater effect on Huhan-3 than on II-32B. Sequence analysis revealed that the DML were widely distributed on all 12 rice chromosomes and that it mainly occurred on the gene's promoter and exon region. Some genes with DML respond to environmental stresses. The inheritance of epigenetic variations induced by drought stress may provide a new way to develop drought resistant rice varieties.

  19. Rice and foxtail millet cultivation reconstructed from weed seed assemblages in the Chengtoushan site, central China

    International Nuclear Information System (INIS)

    Nasu, H.; Yasuda, Y.; Momohara, A.; Jiejun, H.

    2005-01-01

    Full text: Crop weeds have been successfully used for evaluation of farming practices in archaeological sites and reconstruction of the environmental condition. In rice agricultural sites in East Asia, however, a few studies of crop remains have been attempted. We evaluated the crop husbandry based on plant macrofossils including crop grains and weed seeds in the Chengtoushan site, Hunan Province, central China, which is one of the oldest rice agricultural site around the Yangtze River Basin. In the moat surrounding the site that is located on a loess plateau that juts out into the alluvial plain, we recognized three cultural layers during the Daxi Culture. Plant macrofossils in silty clay deposits in the moat consist of abundant rice and foxtail millet grains with many weed seeds. Radiocarbon age of these fossils shows that rice and foxtail millet cultivation dated back to 6400 cal. years B.P. The weed seed composition characterizes farmland and ruderal environments in the site surrounded by the moat. We assumed foxtail millet and rice cultivation practiced within the site on loess plateau, along with a paddy style rice cultivation in the alluvial lowland outside of the site. (author)

  20. 1 Agronomic performance of five rice varieties.cdr

    African Journals Online (AJOL)

    user

    growing food source in Africa (Nwanze et al., 2006). ... vitro gas production. The varieties differed (P < 0.05) in relation to plant height, maturity ... have appreciable levels of crude protein ..... saliva; the composition and output of sheep's saliva.

  1. Microsatellite Markers in and around Rice Genes: Applications in Variety Identification and DUS Testing

    NARCIS (Netherlands)

    Bonow, S.; Pinho, Von E.V.R.; Vieira, M.G.C.; Vosman, B.

    2009-01-01

    In Brazil, rice (Oryza sativa L.) varieties adapted to different ecological regions are available on the market. However, these varieties exhibit highly similar morphologies, which makes their identification difficult. In this study we identified microsatellites in and around genes that are useful

  2. Chemometrical characterization of four italian rice varieties based on genetic and chemical analyses.

    Science.gov (United States)

    Brandolini, Vincenzo; Coïsson, Jean Daniel; Tedeschi, Paola; Barile, Daniela; Cereti, Elisabetta; Maietti, Annalisa; Vecchiati, Giorgio; Martelli, Aldo; Arlorio, Marco

    2006-12-27

    This paper describes a method for achieving qualitative identification of four rice varieties from two different Italian regions. To estimate the presence of genetic diversity among the four rice varieties, we used polymerase chain reaction-randomly amplified polymorphic DNA (PCR-RAPD) markers, and to elucidate whether a relationship exists between the ground and the specific characteristics of the product, we studied proximate composition, fatty acid composition, mineral content, and total antioxidant capacity. Using principal component analysis on genomic and compositional data, we were able to classify rice samples according to their variety and their district of production. This work also examined the discrimination ability of different parameters. It was found that genomic data give the best discrimination based on varieties, indicating that RAPD assays could be useful in discriminating among closely related species, while compositional analyses do not depend on the genetic characters only but are related to the production area.

  3. Characterising rice-based farming systems to identify opportunities for adopting water efficient cultivation methods in Tamil Nadu, India

    NARCIS (Netherlands)

    Senthilkumar, K.; Bindraban, P.S.; Boer, de W.J.; Ridder, de N.; Thiyagarajan, T.M.; Giller, K.E.

    2009-01-01

    Efficient water use in rice cultivation is a prerequisite for sustaining food security for the rice consuming population of India. Novel rice production practices, including water-saving techniques, modifications in transplanting, spacing, weeding and nutrient management, have been developed and

  4. Characterization and quantification of γ-oryzanol in grains of 16 Korean rice varieties.

    Science.gov (United States)

    Kim, Heon Woong; Kim, Jung Bong; Cho, Soo-Muk; Cho, Il Kyu; Li, Qing X; Jang, Hwan-Hee; Lee, Sung-Hyeon; Lee, Young-Min; Hwang, Kyung-A

    2015-03-01

    γ-Oryzanol, a mixture of ferulic acid esters of triterpene alcohols and sterols, is a nutritionally important group of rice secondary metabolites. A library of 27 γ-oryzanol was assembled from existing data and used to assist identification and quantification of γ-oryzanol isolated from 16 Korean rice varieties (11 white and 5 pigmented). γ-Oryzanol was analyzed with liquid chromatography with diode array detection and electrospray ionization mass spectrometry. Nineteen different γ-oryzanol were observed and identified as stigmasterol, campesterol and sitosterol or common and hydroxylated triterpene alcohols. In the 16 varieties, the total γ-oryzanol content averaged 43.8 mg/100 g (range, 26.7-61.6 mg/100 g), which Josaengheugchal exhibited the highest level (61.6 mg/100 g). The Korean rice varieties were classified based on qualitative and quantitative γ-oryzanol data by multivariate statistical analysis. Clusters of specialty rice varieties exhibited higher γ-oryzanol levels than those of common rice varieties.

  5. Induction of mutations in Thai rice varieties and subsequent selection and testing of beneficial mutant lines

    Energy Technology Data Exchange (ETDEWEB)

    Dasananda, S; Khambanonda, P [Ministry of Agriculture, Bangkok (Thailand)

    1970-03-01

    Ionizing radiations were first used in the Thailand Rice Breeding Program in 1955 when seeds of two recommended varieties were sent to the United States of America for treatment. As a result, five promising mutant lines are at present in regional yield tests where they are being considered for recommendation to rice growers. During the period 1960-1961 an unsuccessful attempt was made to induce resistance to blast in three susceptible varieties by exposing seeds to a local source of ionizing radiation In 1964, after an elapse of about 4 years, another attempt was made to utilize ionizing radiations in the breeding program by treating seeds of two recommended varieties. In 1965, a co-ordinated rice mutation breeding program was initiated under the auspices of the Joint FAO/IAEA Division of Atomic Energy in Food and Agriculture which resulted in treating seeds of twelve different rice varieties with both ethyl methane sulphonate and gamma rays from a {sup 60}Co gamma cell. The results so far indicate that mutagenic agents have been successful in producing genetic variability. Differences in heading date, mature plant height and plant type are frequently observed in the M{sub 2} and M{sub 3} generations. Several lines obtained from two of the irradiated varieties have exhibited a higher degree of resistance to blast than the parental material. From 15-kR treatments of non-glutinous varieties, mutants with glutinous endosperm have been obtained. Not all varieties gave the same response to treatment. (author)

  6. 210Pb and 210Po concentrations determined in Nicotiana tabacum L., Burley variety, cultivated in Brazil

    International Nuclear Information System (INIS)

    Damatto, Sandra R.; Rocha, Rique J.; Da Silva, Carolina F.; Frujuele, Jonatan V.

    2013-01-01

    Tobacco products are extensively used throughout the world and the most consumed are cigarettes cigars and narghile. The damaging effects that these products cause to human health are discussed worldwide and many researches are performed with the aim of relating the use of these products with various illnesses. Brazil is the largest exporter and second largest producer of tobacco worldwide, according to the crop year 2009/2010 production. The tobacco plant (Nicotiana tabacum L.) is used to manufacture all derivatives and the chemical composition of the resulting tobacco varies with the type of tobacco leaves, how they are grown, the region where they are cultivated, the characteristics of preparation (compression, filter and paper) and the temperature variation resulting from the incomplete combustion of tobacco. There is lack of information about the chemical and radiological characterization of the tobacco plant both in international and Brazilian literature. Thus a project was established with the objectives of characterizing chemically and radiologically the three varieties most cultivate in Brazil of Nicotiana tabacum L.; this paper presents the preliminary results of 210 Pb and 210 Po concentration for the Burley variety. Plants from this variety cultivated in open air, both in pots with special soil and fertilizer; and in small farms in natural conditions. The whole plant was analyzed; root, steam, leaves and flowers. The results obtained presented higher values for 210 Pb in leaves when compared with the other parts of the plant. (author)

  7. A contribution to the characterisation by electrophoresis of grape plant varieties cultivated in Galicia (NW Spain

    Directory of Open Access Journals (Sweden)

    María del Pilar Saa-Otero

    2000-03-01

    Full Text Available Electrophoresis was employed as the method of study for the characterisation of Vitis vinifera varieties cultivated in Galicia (Spain. Mature dormant shoots were used for the study. The enzymatic system glucose- phosphate isomerase (GPI was analysed using the method of PARFITT and ARULSEKAR (1989. Seventeen varieties (Albariño, Dona Blanca, Godello, Loureira, Treixadura, Torrontés, Albillo, Palomino, Verdejo Blanco, Macabeo, Jerez Fina, Asal Galego, Moscatel Galego, Galego Dourado, Galego de Montemor, Brancellao, and Caiño Bravo were studied. Eight groups of phenotypes were obtained. Each one of which had clearly differentiated characteristics from more than one varity, except in the case of Garnacha.

  8. Relative availability of crop residue-N in rice cultivation

    International Nuclear Information System (INIS)

    Sirwando, H; Abdullah, N.

    1988-01-01

    The use of plant residues for soil amendment will reduce the use of chemical fertilizers. The experiment to study the uptake of N from various plant residues by rice crop. Three kinds of plant residue of soybean labelled with 15-N. Four levels of urea (0, 15, 30, 40 kg N/ha) were applied to aluvial soil from Pusakanegara. The factorial experiment was conducted in fully randomize design, with plant residues as the main treatment, and rate of urea as substreatment. The results obtained from this experiment showed that plant dry weight, N content of grain, straw, and the whole plant of Atomita I rice treated with soybean strow seens to be higher than those treated with the straw of rice or corn. (author). 6 refs.; 7 tabs

  9. Germination Response of MR 219 Rice Variety to Different Exposure Times and Periods of 2450 MHz Microwave Frequency

    Directory of Open Access Journals (Sweden)

    Daryush Talei

    2013-01-01

    Full Text Available Germination is a key process in plants' phenological cycles. Accelerating this process could lead to improvment of the seedling growth as well as the cultivation efficiency. To achieve this, the effect of microwave frequency on the germination of rice seeds was examined. The physiological feedbacks of the MR 219 rice variety in terms of seed germination rate (GR, germination percentage (GP, and mean germination time (MGT were analyzed by exposing its seeds to 2450 MHz of microwave frequency for one, four, seven, and ten hours. It was revealed that exposing the seeds to the microwave frequency for 10 hours resulted in the highest GP. This treatment led to 100% of germination after three days with a mean germination time of 2.1 days. Although the other exposure times of microwave frequency caused the moderate effects on germination with a GPa3 ranged from 93% to 98%, they failed to reduce the MGTa3. The results showed that ten-hour exposure times of microwave frequency for six days significantly facilitated and improved the germination indices (primary shoot and root length. Therefore, the technique is expected to benefit the improvement of rice seed germination considering its simplicity and efficacy in increasing the germination percentage and rate as well as the primary shoot and root length without causing any environmental toxicity.

  10. Experimental studies on the injurious effect of sulfur dioxide upon the rice cultivation

    Energy Technology Data Exchange (ETDEWEB)

    Teshima, T; Takahashi, T

    1952-01-01

    From experimental studies on the injurious effect of sulfur dioxide upon the cultivation of rice it was ascertained that SO2 strongly affects the pollen and the ovary. The pollen and the matured grain showed a decrease in fertility when the plant is fumigated at the flowering and boot stage.

  11. Elucidating potential utilization of Portuguese common bean varieties in rice based processed foods.

    Science.gov (United States)

    Carbas, Bruna; Pathania, Shivani; Castanho, Ana; Lourenço, Diana; Veiga, Isabel Mota; Patto, Maria Carlota Vaz; Brites, Carla

    2018-03-01

    The present study was aimed at studying the physico-chemical and functional properties of 31 Portuguese common bean varieties. In addition, the whole bean flours (WBF) and starch isolates (SI) of three representative bean varieties and their rice: bean blends (70:30; 50:50) were assessed for amylose content, thermal and pasting properties in view of supplementation in rice based processed foods. Bean varieties showed significant differences in protein content (20.78-27.10%), fat content (1.16-2.18%), hydration capacity (95.90-149.30%), unhydrated seeds (4.00-40.00%), γ tocopherol (3.20-98.05 mg/100 g fat), δ tocopherol (0.06-4.72 mg/100 g fat) and pasting behavior. Amylose content of WBF (11.4-20.2%) was significantly lower than rice flour (23.51%) whereas SI of beans (40.00-47.26%) had significantly higher amylose content than SI of rice (28.13%). DSC results showed that WBF (11.4-20.2 °C) had significantly broader and lower gelatinization temperature range (∆Tr) than corresponding SI (20.9-23.1 °C). WBF had significantly lower pasting viscosity due to low starch content and compositional matrix effect as compared to SI. Setback viscosities of WBF and rice: bean blends was lower than rice flour. Low setback viscosities of rice:bean blends may be used to prevent syneresis and stabilizing the quality of frozen foods in rice based processed foods.

  12. Identification of Heading Date Six (Hd6 Gene Derived from Rice Mutant Varieties

    Directory of Open Access Journals (Sweden)

    Aryanti Aryanti

    2017-04-01

    Full Text Available Genes which were associated with flowering time to indicate the early maturity is known as heading date (Hd. Heading date six (Hd6 gene was identified from rice mutant varieties were Atomita 2, Atomita 3, Atomita 4, Bestari, Cilosari, Diah Suci, Sidenuk, Kahayan, Mayang, Meraoke, Mira-1, Pandan Putri, Superwin, Suluttan Unsrat 1, Suluttan Unsrat 2, Winongo, Woyla, Yuwono, while the rice var. Nipponbare was used as a positive control. All of rice mutant varieties derived from mutation induction by the dose of 0.2 kGy. The aim of this experiment was to find out the data base of mutant varieties which could be used as parent material with earlier maturity trait genetically. To obtain the DNA of plants, young leaves of each variety were extracted by liquid nitrogen, and then lysis and extracted by Kit Plant Genomic DNA. The amplification of DNA with 7 primers of Hd6 conducted of 40 cycles by PCR and were continues to separated by 1 % agarose. The results were shown that the rice Mira-1 and Bestari varieties obtained from mutation of Cisantana highly different from one to another on 7 primers of Hd6 used. Mayang variety from mutation of cross breeding between Cilosari and IR64, Pandan putri from Pandan wangi and Woyla from mutation of cross breeding from Atomita 2 and IR64 were highly different with those of their parents. Identification of Hd6 gene on Sidenuk variety was shown the same bands pattern with Nipponbare as control positive toward all primers used, this variety would be better for earlier maturity parent material compared to others. The information could be useful for breeding programs aiming to develop early maturing widely adaptive and high yielding rice cultivars.

  13. Milling, Nutritional, Physical and Cooking Properties of Four Basmati Rice Varieties

    Directory of Open Access Journals (Sweden)

    Pravin Ojha

    2018-05-01

    Full Text Available Rice is one of the most popular staple foods produced contributing higher most in agriculture gross domestic production in Nepal. Thus, nutritional, physicochemical, and cooking properties of rice might interplay important roles in their production and farming practice, therefore, it is inevitable to understand these characteristic features. However, there has been only limited information available on such properties, therefore we aimed to examine nutritional, physicochemical and cooking properties of four Basmati varieties of rice namely Red Basmati, White Basmati, Black Basmati and Pokhareli Basmati. These rice varieties were purchased from different places in Nepal in paddy form. In this study various parameters associated with milling, nutritional, physical and cooking properties were evaluated. To measure protein contents in rice, Kjeldal method was implied. Among the varieties, the protein content was maximum in Red Basmati (7.74% and minimum in Black Basmati (6.51%. The milled rice percentage and head rice recovery were maximum in Pokhareli Basmati represented by 72.02±0.10 and 67.46±0.42, respectively, while and minimum in White Basmati represented by 68.17±0.50 and 65.11±0.28, respectively. The kernel elongation ratio and volume expansion ratio was maximum in Red Basmati represented by 1.62 and 2.85 respectively. Water uptake ratio was maximum 3.11 in Black Basmati and minimum of 2.18 in Red Basmati. Gruel loss was found lowest 1.05% in Red Basmati and highest represented by 2.40% in Black Basmati. The highest starch iodine blue value of 0.21 was observed in Red Basmati and lowest of 0.12 in Black Basmati. The Red Basmati was found to have the better cooking quality among all varieties.

  14. Untapped Endophytic Colonization and Plant Growth-Promoting Potential of the Genus Novosphingobium to Optimize Rice Cultivation

    OpenAIRE

    Rangjaroen, Chakrapong; Sungthong, Rungroch; Rerkasem, Benjavan; Teaumroong, Neung; Noisangiam, Rujirek; Lumyong, Saisamorn

    2017-01-01

    With the aim of searching for potent diazotrophic bacteria that are free of public health concerns and optimize rice cultivation, the endophytic colonization and plant growth-promoting activities of some endophytic diazotrophic bacteria isolated from rice were evaluated. Among these bacteria, the emerging diazotrophic strains of the genus Novosphingobium effectively associated with rice plant interiors and consequently promoted the growth of rice, even with the lack of a nitrogen source. Thes...

  15. Assessment of 210Pb concentration in Nicotiana tabacum L., burley variety, cultivated in Brazil

    International Nuclear Information System (INIS)

    Rocha, Rique J.F.X.; Silva, Carolina F.; Frujuele, Jonatan V.; Bovolini, Raquel R.; Damatto, Sandra R.

    2013-01-01

    Tobacco products are extensively used throughout the world and the most consumed are cigarettes, cigars and narghile. The damaging effects that these products cause to human health are discussed worldwide and many researches are performed with the aim of relating the use of these products with various diseases. Brazil is the largest exporter and second largest producer of tobacco worldwide, according to the crop year 2009/2010 production. The tobacco plant (Nicotiana tabacum L.) is used to manufacture all derivatives and the chemical composition of the resulting tobacco varies with the type of tobacco leaves, how they are grown, the region where they are cultivated, the characteristics of preparation and the temperature variations resulting from the tobacco incomplete combustion. There is lack of information about the chemical and radiological characterization of the tobacco plant both in international and Brazilian literature. Thus a project was established with the objectives of characterizing chemically and radiologically the three varieties most cultivated in Brazil of Nicotiana tobacum L., Virginia, Burley and Common; this paper presents the preliminary results of 210 Pb concentrations for the Burley variety. Plants from this variety were cultivated in pots with organic substrate and fertilizer and in a small farm in natural conditions. The entire plant was analyzed, the organic substrates, the fertilizers and the soil. The results obtained presented higher values for 210 Pb in leaves when compared with the other parts of the plant. Comparing the three study areas the highest results of 210 Pb concentration were obtained in the plants cultivated in the urban area probably due to its atmospheric deposition. (author)

  16. Assessment of {sup 210}Pb concentration in Nicotiana tabacum L., burley variety, cultivated in Brazil

    Energy Technology Data Exchange (ETDEWEB)

    Rocha, Rique J.F.X.; Silva, Carolina F.; Frujuele, Jonatan V.; Bovolini, Raquel R.; Damatto, Sandra R., E-mail: rjrocha@ipen.br, E-mail: cfsilva@ipen.br, E-mail: jonatanfrujuele@hotmail.com, E-mail: ra_bovolini@yahoo.com.br, E-mail: damatto@ipen.br [Instituto de Pesquisas Energeticas e Nucleares (IPEN/CNEN-SP), Sao Paulo, SP (Brazil). Lab. de Radiometria Ambiental

    2013-07-01

    Tobacco products are extensively used throughout the world and the most consumed are cigarettes, cigars and narghile. The damaging effects that these products cause to human health are discussed worldwide and many researches are performed with the aim of relating the use of these products with various diseases. Brazil is the largest exporter and second largest producer of tobacco worldwide, according to the crop year 2009/2010 production. The tobacco plant (Nicotiana tabacum L.) is used to manufacture all derivatives and the chemical composition of the resulting tobacco varies with the type of tobacco leaves, how they are grown, the region where they are cultivated, the characteristics of preparation and the temperature variations resulting from the tobacco incomplete combustion. There is lack of information about the chemical and radiological characterization of the tobacco plant both in international and Brazilian literature. Thus a project was established with the objectives of characterizing chemically and radiologically the three varieties most cultivated in Brazil of Nicotiana tobacum L., Virginia, Burley and Common; this paper presents the preliminary results of {sup 210}Pb concentrations for the Burley variety. Plants from this variety were cultivated in pots with organic substrate and fertilizer and in a small farm in natural conditions. The entire plant was analyzed, the organic substrates, the fertilizers and the soil. The results obtained presented higher values for {sup 210}Pb in leaves when compared with the other parts of the plant. Comparing the three study areas the highest results of {sup 210}Pb concentration were obtained in the plants cultivated in the urban area probably due to its atmospheric deposition. (author)

  17. Massive gene losses in Asian cultivated rice unveiled by comparative genome analysis

    Directory of Open Access Journals (Sweden)

    Itoh Takeshi

    2010-02-01

    Full Text Available Abstract Background Rice is one of the most important food crops in the world. With increasing world demand for food crops, there is an urgent need to develop new cultivars that have enhanced performance with regard to yield, disease resistance, and so on. Wild rice is expected to provide useful genetic resources that could improve the present cultivated species. However, the quantity and quality of these unexplored resources remain unclear. Recent accumulation of the genomic information of both cultivated and wild rice species allows for their comparison at the molecular level. Here, we compared the genome sequence of Oryza sativa ssp. japonica with sets of bacterial artificial chromosome end sequences (BESs from two wild rice species, O. rufipogon and O. nivara, and an African rice species, O. glaberrima. Results We found that about four to five percent of the BESs of the two wild rice species and about seven percent of the African rice could not be mapped to the japonica genome, suggesting that a substantial number of genes have been lost in the japonica rice lineage; however, their close relatives still possess their counterpart genes. We estimated that during evolution, O. sativa has lost at least one thousand genes that are still preserved in the genomes of the other species. In addition, our BLASTX searches against the non-redundant protein sequence database showed that disease resistance-related proteins were significantly overrepresented in the close relative-specific genomic portions. In total, 235 unmapped BESs of the three relatives matched 83 non-redundant proteins that contained a disease resistance protein domain, most of which corresponded to an NBS-LRR domain. Conclusion We found that the O. sativa lineage appears to have recently experienced massive gene losses following divergence from its wild ancestor. Our results imply that the domestication process accelerated large-scale genomic deletions in the lineage of Asian

  18. Breeding of Hangtian 36-an early-maturing variety of japonica rice by space mutation technique

    International Nuclear Information System (INIS)

    Wang Junmin; Luo Rongting; Bao Genliang; Zhang Mingxian; Xu Jianlong; Wu Wei

    2007-01-01

    Hangtian 36; an early-maturing late Japonica rice variety with high grain quality and disease resistance was developed from the mutagenesis progeny of Bing 1067 carried by the recoverable satellite. Hangtian 36 has advantages over the original variety Bing 1067 in mature duration, grain quality and blast resistance. It has strong tolerant ability to late sow, varying from sowing date of single cropping to the end of July. So it is an ideal variety suitable for the use of emergency situation, such as in the natural disaster year resulting from typhoon. This variety was officially registered by Zhejiang Committee on Variety Registration in 2006, and is adaptable in the region of Zhejiang province and the Yangtze River delta. The successful breeding of Hangtian 36 showed that space mutation is an effective method of simultaneous improvement for multiple traits of rice. (authors)

  19. Effect of microwave energy on grain quality of four Spanish rice varieties

    International Nuclear Information System (INIS)

    Osca, J.M.; Marzal, A.; Castell, V.; Martínez, J.; Benedito, C.; Balbastre, J.V.; Sánchez-Hernández, D.

    2005-01-01

    A microwave system can be used as an alternative method to methyl bromide to control rice storage pests. Four rice varieties (Oryza sativa L.) grown in Spain (‘Bomba’, ‘Senia’, ‘Puntal’ and ‘Thainato’) were irradiated with three levels of microwave energy (0, 70 and 100 J g –1 ). Rice quality attributes were analysed to establish hypothetical quality changes in order to use microwave energy as an alternative method to control pests. Results of the factorial analysis showed that the analysed attributes differed more within varieties than among microwave treatments of the varieties, except for ‘Thainato’ which, after applying microwave energy of 100 J g –1 , presented a different adhesiveness from the other two treatments determined by factor 1 and ‘Puntal’ treated with microwaves presented a different water uptake and loss of solids in cooking water determined by factor 3 than the control. The increase in hardness and decrease in adhesiveness as a consequence of the microwave treatment could possibly damage rice quality. This aspect must be taken into account with this method. In conclusion, microwave energy can be used as an alternative method of insect control because it does not seriously affect rice quality. Microwave treatments did not leave undesirable residues and could be as effective at controlling insect infestation as any procedure currently available. (author) [es

  20. A correlation study of proximate composition, physical and cooking properties of new high yielding and disease resistant rice varieties

    Directory of Open Access Journals (Sweden)

    Nuzhat Rasool

    2015-12-01

    Full Text Available The present study was aimed to compare proximate composition, physical, and cooking properties of locally cultivated rice varieties of Kashmir division viz.; SR-1, K-448, and K-39. Various physiochemical properties were studied. The relationship between physical, proximate composition, and cooking properties was determined using Pearson’s correlation. Length–breadth (L/B ratio showed a significant positive correlation with kernel length and negative correlation with thousand kernel weight, with a correlation coefficient (r of 0.893 and −0.855, respectively, (p  0.05. Solid loss in gruel was observed to have a negative correlation with L/B ratio (r = −0.432, p > 0.05, water uptake ratio (r = −0.742, p < 0.05, and cooking time (r = −0.678, p < 0.05. The rice cultivars with higher cooking time showed lower gruel solid loss and vice versa. Water uptake was observed to be positively correlated with L/B ratio (r = 0.768, p < 0.05. Among all the cultivars studied, K-448 variety has potential for consumers’ preference and it could be used for breeding programs for the improvement of valuable grain quality traits.

  1. Rice Bran Stabilization And G-Oryzanol Content Of Two Local Paddy Varieties Ir 64 And Cisadane Muncul

    Directory of Open Access Journals (Sweden)

    Evy Damayanthi

    2001-04-01

    Full Text Available An autoclaving procedure was developed to produce stable rice bran from two local paddy varieties IR 64 and Cisadane Muncul. The stable rice bran showed no significant increase in free fatty acid content for 144 hours at 37oC. In the optimum wet heating process, rice bran was heated at 121oC and held for 3 minutes before cooling for both varieties. Stable rice bran contained 3.8 % moisture and the content of total tocopherol was not much changed by heating process, i.e., 209.8 mg/100 g rice bran oil and 279.8 for control (without heating process of IR 64 variety and 227.4 mg/100 g rice bran oil and 248.8 for control of Cisadane Muncul variety, respectively. The content of g-oryzanol varied and was depended on the degree of milling ranged from 39.1 to 147.7 mg/100 g rice bran oil for both of IR 64 and Cisadane Muncul rice varieties. The content of soluble dietary fiber varied and was depended on the degree of milling which ranged from 3.56 to 8.76 % for both of IR 64 and Cisadane Muncul rice varieties. The content of insoluble dietary fiber varied and was depended on the degree of milling which ranged from 15.00 to 25.38 % for both of IR 64 and Cisadane Muncul rice varieties.

  2. Genetic diversity, identification, and certification of Chilean rice varieties using molecular markers

    Directory of Open Access Journals (Sweden)

    Viviana Becerra

    2015-09-01

    Full Text Available It takes approximately 14 yr to produce a new rice (Oryza sativa L. variety, that is, from initial hybridization to its commercial release. Currently, new varieties are identified based on morphological descriptors, which have been efficient over time. However, due to the main constraints on seed type impose to other breeding objectives and the pressure of continuous release of varieties, high degree of parentage, and genetic and morphological uniformity has been observed in the breeding populations. The objectives of this study were: to determine the genetic variability of Chilean and foreign commercial rice varieties, and determine, identify, and certify the genetic relationships among varieties, using simple sequence repeat (SSR markers. A total of 16 commercial varieties, some of them closely related, were included in the study, which were genétically analyzed using 54 microsatellites. The 54 microsatellite loci allowed the discrimination among the 16 varieties. The number of alleles ranged between 2 and 8 with a mean of 3.54 alleles per locus, while the polymorphism information content (PIC presented a mean of 0.44. The genetic distance and diversity parameters between pairs of varieties indicate a limited diversity among these genotypes. The cluster analysis indicated that varieties were grouped according to their grain type and pedigree. Results demonstrate that the identification and certification of varieties using microsatellite markers could be a good complement to existing agro-morphological data when varieties are closed related.

  3. Influence of Crop Nutrition on Grain Yield, Seed Quality and Water Productivity under Two Rice Cultivation Systems

    Directory of Open Access Journals (Sweden)

    Y.V. SINGH

    2013-03-01

    Full Text Available The system of rice intensification (SRI is reported to have advantages like lower seed requirement, less pest attack, shorter crop duration, higher water use efficiency and the ability to withstand higher degree of moisture stress than traditional method of rice cultivation. With this background, SRI was compared with traditional transplanting technique at Indian Agricultural Research Institute, New Delhi, India during two wet seasons (2009–2011. In the experiment laid out in a factorial randomized block design, two methods of rice cultivation [conventional transplanting (CT and SRI] and two rice varieties (Pusa Basmati 1 and Pusa 44 were used under seven crop nutrition treatments, viz. T1, 120 kg/hm2 N, 26.2 kg/hm2 P and 33 kg/hm2 K; T2, 20 t/hm2 farmyard manure (FYM; T3, 10 t/hm2 FYM + 60 kg/hm2 N; T4, 5 t/hm2 FYM + 90 kg/hm2 N; T5, 5 t/hm2 FYM + 60 kg/hm2 N + 1.5 kg/hm2 blue green algae (BGA; T6, 5 t/hm2 FYM + 60 kg/hm2 N + 1.0 t/hm2 Azolla, and T7, N0P0K0 (control, no NPK application to study the effect on seed quality, yield and water use. In SRI, soil was kept at saturated moisture condition throughout vegetative phase and thin layer of water (2–3 cm was maintained during the reproductive phase of rice, however, in CT, standing water was maintained in crop growing season. Results revealed that CT and SRI gave statistically at par grain yield but straw yield was significantly higher in CT as compared to SRI. Seed quality was superior in SRI as compared to CT. Integrated nutrient management (INM resulted in higher plant height with longer leaves than chemical fertilizer alone in both the rice varieties. Grain yield attributes such as number of effective tillers per hill, panicle length and panicle weight of rice in both the varieties were significantly higher in INM as compared to chemical fertilizer alone. Grain yields of both the varieties were the highest in INM followed by the recommended doses of chemical fertilizer. The grain yield

  4. Morphological and starch structural characteristics of the Japonica rice mutant variety Seolgaeng for dry-milled flour

    Science.gov (United States)

    Producing fine, good quality rice flour is more difficult than wheat flour because the rice grain is harder. In this study, we analyzed the relationship between the morphology and starch of kernels from genetically different rice varieties that can be used to make dry-milled flour. The non-glutinous...

  5. Genotypes analysis of ten genes related to eating quality of 22 Shanghai important rice varieties by molecular marker

    Directory of Open Access Journals (Sweden)

    XIE Mixue

    2013-08-01

    Full Text Available The improvement of rice eating quality is a very important direction of rice breeding.Clearing the different genotype of rice eating quality provides the basis for the parent selection on breeding good eating quality rice.Using molecular marker detection technology,genotypes of ten genes related to eating quality of 22 Shanghai important rice varieties,including conventional rice and hybrid parents were detected.The results showed that "Zixiangnuo 861" rice contained many poor genotypes which might affect rice eating quality.The genotypes of 3 male parents,"Xiangqin","R44" and "Fan14" for three kinds of hybrid rice,"Hannyouxiangqing","Qiuyoujinfeng" and "Huayou14",respectively,were not as good as their corresponding female parents,"HanfengA","JinfengA" and "Shen9A" and another conventional rice varieties.Wx polymorphism analysis showed that there were two glutinous rice,four soft rice japonica and 16 non-soft rice japonica."Baonong34","Jinfeng" and "Yinxiang18" had relatively better genotypes of the genes controlling eating quality among the 16 non-soft rice japonica.

  6. Introduction of a rice blight resistance gene, Xa21, into five Chinese rice varieties through an Agrobacterium-mediated system

    Institute of Scientific and Technical Information of China (English)

    2000-01-01

    A cloned gene, Xa21 was transferred into five widely-used Chinese rice varieties through an Agrobacterium-mediated system, and over 110 independent transgenic lines were obtained. PCR and Southern analysis of transgenic plants revealed the integration of the whole Xa21 gene into the host genomes. The integrated Xa21 gene was stably inherited, and segregated in a 3∶1 ratio in the selfed T1 generation when one copy of the gene was integrated in the transformants. Inoculation tests displayed that transgenic T0 plants and Xa21 PCR-positive T1 plants were highly resistant to bacterial blight disease. The selected Xa21 homozygous resistant transgenic lines with desirable qualities may be propagated as new varieties or utilized in hybrid rice breeding.

  7. Introduction of a rice blight resistance gene, Xa21, into five Chinese rice varieties through an Agrobacterium -mediated system

    Institute of Scientific and Technical Information of China (English)

    翟文学; 李晓兵; 田文忠; 周永力; 潘学彪; 曹守云; 赵显峰; 赵彬; 章琦; 朱立煌

    2000-01-01

    A cloned gene, Xa21 was transferred into five widely-used Chinese rice varieties through an Agrobacterium-mediated system, and over 110 independent transgenic lines were obtained. PCR and Southern analysis of transgenic plants revealed the integration of the whole Xa21 gene into the host genomes. The integrated Xa21 gene was stably inherited, and segregated in a 3 : 1 ratio in the selfed T1 generation when one copy of the gene was integrated in the transfor-mants. Inoculation tests displayed that transgenic T0 plants and Xa21 PCR-positive T1 plants were highly resistant to bacterial blight disease. The selected Xa21 homozygous resistant transgenic lines with desirable qualities may be propagated as new varieties or utilized in hybrid rice breeding.

  8. Introgression from cultivated rice alters genetic structures of wild relative populations: implications for in situ conservation

    Science.gov (United States)

    Jin, Xin; Chen, Yu; Liu, Ping; Li, Chen; Cai, Xingxing; Rong, Jun

    2018-01-01

    Abstract Maintaining genetic integrity is essential for in situ and ex situ conservation of crop wild relative (CWR) species. However, introgression of crop alleles into CWR species/populations may change their genetic structure and diversity, resulting in more invasive weeds or, in contrast, the extinction of endangered populations. To determine crop-wild introgression and its consequences, we examined the genetic structure and diversity of six wild rice (Oryza rufipogon) populations under in situ conservation in China. Thirty-four simple sequence repeat (SSR) and 34 insertion/deletion markers were used to genotype the wild rice populations and two sets of rice cultivars (O. sativa), corresponding to the two types of molecular markers. Shared alleles and STRUCTURE analyses suggested a variable level of crop-wild introgression and admixture. Principal coordinates and cluster analyses indicated differentiation of wild rice populations, which was associated with the spatial distances to cultivated rice fields. The level of overall genetic diversity was comparable between wild rice populations and rice cultivars, but a great number of wild-specific alleles was detected in the wild populations. We conclude based on the results that crop-wild introgression can considerably alter the pattern of genetic structure and relationships of CWR populations. Appropriate measures should be taken for effective in situ conservation of CWR species under the scenario of crop-wild introgression. PMID:29308123

  9. Research Advances in High-Yielding Cultivation and Physiology of Super Rice

    Directory of Open Access Journals (Sweden)

    Jing FU

    2012-09-01

    Full Text Available In 1996, China launched a program to breed super rice or super hybrid rice by combining intersubspecific heterosis with ideal plant types. Today, approximately 80 super rice varieties have been released and some of them show high grain yields of 12–21 t/hm2 in field experiments. The main reasons for the high yields of super rice varieties, compared with those of conventional varieties, can be summarized as follows: more spikelets per panicle and larger sink size (number of spikelets per square meter; larger leaf area index, longer duration of green leaf, greater photosynthetic rate, higher lodging resistance, greater dry matter accumulation before the heading stage, greater remobilization of pre-stored carbohydrates from stems and leaves to grains during the grain-filling period; and larger root system and greater root activity. However, there are two main problems in super rice production: poor grain-filling of the later-flowering inferior spikelets (in contrast to earlier-flowering superior spikelets, and low and unstable seed-setting rate. Here, we review recent research advances in the crop physiology of super rice, focusing on biological features, formation of yield components, and population quality. Finally, we suggest further research on crop physiology of super rice.

  10. Response to different rates of nitrogen by five varieties of swamp rice

    African Journals Online (AJOL)

    A field experiment was conducted in 2011 and 2012 in Ini Local Government Area of Akwa Ibom State, Nigeria; mainly to determine the optimum nitrogen fertilizer rate for the area as well as select the rice varieties that responded optimally. A split plot design was used with five N rates (0, 50, 100, 150and 200kg/ha) as the ...

  11. Aboveground herbivory by the brown planthopper (Nilaparvata lugens) affects soil nematode communities under different rice varieties

    NARCIS (Netherlands)

    Liu, M.; Huang, J.; Chen, X.; Wang, F.; Ge, C.; Su, Y.; Shao, B.; Tang, Y.; Li, H.

    2009-01-01

    Interactions between aboveground–belowground communities play an important role in regulating terrestrial ecological processes; however, the interactions between rice varieties, herbivory and the soil community are often ignored. A pot experiment with a full 2×2 factorial design was conducted to

  12. Effects of screenhouse cultivation and organic materials incorporation on global warming potential in rice fields.

    Science.gov (United States)

    Xu, Guochun; Liu, Xin; Wang, Qiangsheng; Xiong, Ruiheng; Hang, Yuhao

    2017-03-01

    Global rice production will be increasingly challenged by providing healthy food for a growing population at minimal environmental cost. In this study, a 2-year field experiment was conducted to investigate the effects of a novel rice cultivation mode (screenhouse cultivation, SHC) and organic material (OM) incorporation (wheat straw and wheat straw-based biogas residue) on methane (CH 4 ) and nitrous oxide (N 2 O) emissions and rice yields. In addition, the environmental factors and soil properties were also determined. Relative to the traditional open-field cultivation (OFC), SHC decreased the CH 4 and N 2 O emissions by 6.58-18.73 and 2.51-21.35%, respectively, and the global warming potential (GWP) was reduced by 6.49-18.65%. This trend was mainly because of lower soil temperature and higher soil redox potential in SHC. Although the rice grain yield for SHC were reduced by 2.51-4.98% compared to the OFC, the CH 4 emissions and GWP per unit of grain yield (yield-scaled CH 4 emissions and GWP) under SHC were declined. Compared to use of inorganic fertilizer only (IN), combining inorganic fertilizer with wheat straw (WS) or wheat straw-based biogas residue (BR) improved rice grain yield by 2.12-4.10 and 4.68-5.89%, respectively. However, OM incorporation enhanced CH 4 emissions and GWP, leading to higher yield-scaled CH 4 emissions and GWP in WS treatment. Due to rice yield that is relatively high, there was no obvious effect of BR treatment on them. These findings suggest that apparent environmental benefit can be realized by applying SHC and fermenting straw aerobically before its incorporation.

  13. Comparative Analysis of ?-Oryzanol, ?-Glucan, Total Phenolic Content and Antioxidant Activity in Fermented Rice Bran of Different Varieties

    OpenAIRE

    Jung, Tae-Dong; Shin, Gi-Hae; Kim, Jae-Min; Choi, Sun-Il; Lee, Jin-Ha; Lee, Sang Jong; Park, Seon Ju; Woo, Koan Sik; Oh, Sea Kwan; Lee, Ok-Hawn

    2017-01-01

    Rice bran, a by-product derived from processing rice, is a rich source of bioactive compounds. Recent studies have suggested that the fermentation can improve their biological activities. This study aimed to determined the level of γ-oryzanol, β-glucan and total phenol contents of fermented rice bran from 21 Korean varieties, as well as to evaluate their antioxidant activities. We also assessed the validation of the analytical method for determining γ-oryzanol content in fermented rice brans....

  14. Growth and production of new superior rice varieties in the shade intensity

    Science.gov (United States)

    Alridiwirsah; Harahap, E. M.; Akoeb, E. N.; Hanum, H.

    2018-02-01

    Shade intensity is one of the most important requirements for plant growth, affecting growth, development, survival, and crop productivity. This study aims to evaluate the growth and productiom of New Superior Rice Varieties In The shade Intensity. This study was conducted in Balai Pengkajian Teknologi Pertanian, Pagar Merbau, Deli Serdang, North Sumatra. The research used completely randomized design with twofactors. The shade intensity (N) were 25%, 50% and no shade intensity as a control. Whereas new superior rice varieties were V1: Inpara 2, V2: Suluttan Unsrat 2, V3: Inpari Mugibat, V4: Inpari Sidenuk, V5: Mekongga, V6: Ciherang, V7:Inpari 10, V8: Inpari 3, V9: Inpari 4, V10: Inpari 30, dan V11: Cibogo. The result indicated that new superior rice varietiesshowedsignificant effectonthe growth and productionvariablesuch as leaf area, where Inpari Sidenuk variety was the highest among the varieties. Total chorophyll, the highest was found on Inpari variety. Number of tillers and plant height where the highest was found on Ciherang variety. The shade intensity showed significant effect on leaf area, where 25% shade intensity was the highest. Total chlorophyll, the highest was found on 50% shade intensity, number of tillers, the highest was found on no shade intensity.

  15. Heavy metal distribution frequency in Iranian and imported rice varieties marketed in central Iran, Yazd, 2012

    Directory of Open Access Journals (Sweden)

    Reza Morekian

    2013-01-01

    Full Text Available Aims: This study aimed to determine the concentration of heavy metals including lead (Pb, cadmium (Cd, and arsenic (As in rice samples in Yazd markets. Materials and Methods: In this study, 108 rice samples were collected from 36 different brands including 26 imported and 10 Iranian rice varieties from July-December 2011. Determination of heavy metals was carried out by wet ashing and digestion methods following graphite furnace atomic absorption spectrometry and hydride generation atomic absorption spectrometry. Results: The average concentrations of lead in both Iranian and imported samples were 328.3 ± 81.44 and 254.55 ± 77.2 μg/kg, respectively, well above the safe limit set by Iranian standard, whereas mean concentrations of cadmium and arsenic were both below their permissible limit. In homemade rice samples, their concentration levels were shown to be 37.25 ± 23.39 and 33.5 ± 18.35 μg/kg, respectively. However, for imported products, their levels were 43.71 ± 13.74 and 87.55 ± 72.99 μg/kg, respectively. Conclusion: Deterministic estimation of exposure to heavy metals from rice showed that there was no health issue concerning exposure to toxic metals through rice intake in Iran when potential risk of each heavy metal is considered individually, cumulative risk assessment must be applied in future studies.

  16. Modified Application of Nitrogen Fertilizer for Increasing Rice Variety Tolerance toward Submergence Stress

    Directory of Open Access Journals (Sweden)

    Gribaldi Gribaldi

    2017-01-01

    Full Text Available This research was conducted from July to October 2015, using Randomized Block Design with two treatment factors and three replications for each treatment. The first factor was rice varieties (V: V1 = IR 64; V2 = Inpara 5. The second factor was fertilizer (N: N0: without submergence, all N fertilizer was given during planting; N1: all N fertilizer dose was given during planting; and N2: 1/2 dose of N fertilizer was given during planting; the rest was given at 42 days after planting. The submergence was during 7–14 days after planting; N3 = the entire dose of N fertilizer that was given during planting, N4 = 1/2 the dose of N fertilizer that was given during planting, and the rest was given at 42 days after planting. The submergence was during 7–14 and 28–35 days after planting. The results showed that the management of nitrogen fertilizer application had effect on rice growth and production which experienced dirty water submergence stress; the application of 1/2 dose of N fertilizer given during planting had the best effect on rice growth and production; the longer the submergence period for rice variety, the higher the effect on rice growth and production.

  17. Phenolic characterisation of red wines from different grape varieties cultivated in Mendoza province (Argentina).

    Science.gov (United States)

    Fanzone, Martín; Zamora, Fernando; Jofré, Viviana; Assof, Mariela; Gómez-Cordovés, Carmen; Peña-Neira, Álvaro

    2012-02-01

    Knowledge of the chemical composition of wine and its association with the grape variety/cultivar is of paramount importance in oenology and a necessary tool for marketing. Phenolic compounds are very important quality parameters of wines because of their impact on colour, taste and health properties. The aim of the present work was to study and describe the non-flavonoid and flavonoid composition of wines from the principal red grape varieties cultivated in Mendoza (Argentina). Sixty phenolic compounds, including phenolic acids/derivatives, stilbenes, anthocyanins, flavanols, flavonols and dihydroflavonols, were identified and quantified using high-performance liquid chromatography with diode array detection coupled with electrospray ionisation mass spectrometry (HPLC-DAD/ESI-MS). Marked quantitative differences could be seen in the phenolic profile among varieties, especially in stilbenes, acylated anthocyanins and other flavonoids. The polyphenolic content of Malbec wines was higher compared with the other red varieties. Dihydroflavonols represent a significant finding from the chemotaxonomic point of view, especially for Malbec variety. This is the first report on the individual phenolic composition of red wines from Mendoza (Argentina) and suggests that anthocyanins, flavanols and phenolic acids exert a great influence on cultivar-based differentiation. Copyright © 2011 Society of Chemical Industry.

  18. Effect of increased plant density and fertilizer dose on the yield of rice variety IR-6

    International Nuclear Information System (INIS)

    Amin, M.; Khan, M.A.; Khan, E.A.; Ramazan, M.

    2004-01-01

    An experiment to evaluate the effect of increased plant density and fertilizer dose on yield of rice variety IR-6 was conducted at the farm of Faculty of Agriculture, Gomal University Dera Ismail Khan. Increase plant density significantly increase number of panicles per square meter, sterility and straw yield while increased fertilizer dose of NPK increase plant height, sterility, normal kernels, and 1000 grain weight. Interaction of increased plant density and fertilizer dose was found to be non significant except sterility percentage and straw yield. However efforts are required for increasing yield per unit area of rice. (author)

  19. Elemental analysis of different varieties of rice samples using XRF technique

    Energy Technology Data Exchange (ETDEWEB)

    Kaur, Jaspreet, E-mail: gillpreet05051812@gmail.com; Kumar, Anil, E-mail: gilljaspreet06@gmail.com [Department of Basic and Applied Physics, Punjabi University, Patiala 147002 (India)

    2016-05-06

    Rice is most consumed staple food in the world providing over 21% of the calorie intake of world’s population having high yielding capacity. Elements detected in rice are Al, As, Br, Cd, Cl, Co, Cs, Cu, Fe, Hg, K, Mg, Mn, Mo, Rb, Se and Zn by using Instrumental Neutron Activation with k0 standardization (R. Jayasekera etal,2004). Some of these trace elements are C, H, O, N, S, Ca, P, K, Na, Cl, Mn, Ti, Mg, Cu, Fe, Ni, Si and Zn are essential for growth of human physique The deficiency or excess of these elements in food is known to cause a variety of malnutrition or health disorders in the world. Every year, various varieties of rice are launched by Punjab Agriculture University, Ludhiana. The main purpose of which is to increases the yield to attain the maximum profit. But this leads to changing the elemental concentration in them, which may affect the human health according to variation in the nutrition values. The main objective is to study the presence of elemental concentration in various varieties of rice using EDXRF technique.

  20. Elemental analysis of different varieties of rice samples using XRF technique

    International Nuclear Information System (INIS)

    Kaur, Jaspreet; Kumar, Anil

    2016-01-01

    Rice is most consumed staple food in the world providing over 21% of the calorie intake of world’s population having high yielding capacity. Elements detected in rice are Al, As, Br, Cd, Cl, Co, Cs, Cu, Fe, Hg, K, Mg, Mn, Mo, Rb, Se and Zn by using Instrumental Neutron Activation with k0 standardization (R. Jayasekera etal,2004). Some of these trace elements are C, H, O, N, S, Ca, P, K, Na, Cl, Mn, Ti, Mg, Cu, Fe, Ni, Si and Zn are essential for growth of human physique The deficiency or excess of these elements in food is known to cause a variety of malnutrition or health disorders in the world. Every year, various varieties of rice are launched by Punjab Agriculture University, Ludhiana. The main purpose of which is to increases the yield to attain the maximum profit. But this leads to changing the elemental concentration in them, which may affect the human health according to variation in the nutrition values. The main objective is to study the presence of elemental concentration in various varieties of rice using EDXRF technique.

  1. Biochar amendment changes jasmonic acid levels in two rice varieties and alters their resistance to herbivory.

    Science.gov (United States)

    Waqas, Muhammad; Shahzad, Raheem; Hamayun, Muhammad; Asaf, Sajjad; Khan, Abdul Latif; Kang, Sang-Mo; Yun, Sopheap; Kim, Kyung-Min; Lee, In-Jung

    2018-01-01

    Biochar addition to soil not only sequesters carbon for the long-term but enhances agricultural productivity. Several well-known benefits arise from biochar amendment, including constant provision of nutrients, increased soil moisture retention, decreased soil bulk density, and sometimes the induction of systemic resistance against foliar and soil borne plant pathogens. However, no research has investigated the potential of biochar to increase resistance against herbivory. The white-backed plant hopper (WBPH) (Sogatella furcifera Horváth) is a serious agricultural pest that targets rice (Oryza sativa L.), a staple crop that feeds half of the world's human population. Therefore, we investigated the (1) optimization of biochar amendment levels for two rice varieties ('Cheongcheong' and 'Nagdong') and (2) subsequent effects of different biochar amendments on resistance and susceptibility of these two varieties to WBPH infestation. Initial screening results for the optimization level revealed that the application of biochar 10% (w/w) to the rooting media significantly improved plant physiological characteristics of both rice varieties. However, levels of biochar amendment, mainly 1, 2, 3, and 20%, resulted in negative effects on plant growth characteristics. Cheongcheong and Nagdong rice plants grown with the optimum biochar level showed contrasting reactions to WBPH infestation. Specifically, biochar application significantly increased plant growth characteristics of Nagdong when exposed to WBPH infestation and significantly decreased these characteristics in Cheongcheong. The amount of WBPH-induced damage to plants was significantly lower and higher in Nagdong and Cheongcheong, respectively, compared to that in the controls. Higher levels of jasmonic acid caused by the biochar priming effect could have accumulated in response to WBPH infestation, resulting in a maladaptive response to stress, negatively affecting growth and resistance to WBPH in Cheongcheong. This

  2. Morpho-physiological analysis of tolerance to aluminum toxicity in rice varieties of North East India.

    Science.gov (United States)

    Awasthi, Jay Prakash; Saha, Bedabrata; Regon, Preetom; Sahoo, Smita; Chowra, Umakanta; Pradhan, Amit; Roy, Anupam; Panda, Sanjib Kumar

    2017-01-01

    Aluminum (Al) is the third most abundant metal in earth crust, whose chemical form is mainly dependent on soil pH. The most toxic form of Al with respect to plants is Al3+, which exists in soil pH Eastern India 80% soil are acidic). Al3+ toxicity in plants ensues root growth inhibition leading to less nutrient and water uptake impacting crop productivity as a whole. Rice is one of the chief grains which constitutes the staple food of two-third of the world population including India and is not untouched by Al3+ toxicity. Al contamination is a critical constraint to plant production in agricultural soils of North East India. 24 indigenous Indica rice varieties (including Badshahbhog as tolerant check and Mashuri as sensitive check) were screened for Al stress tolerance in hydroponic plant growth system. Results show marked difference in growth parameters (relative growth rate, Root tolerance index, fresh and dry weight of root) of rice seedlings due to Al (100 μM) toxicity. Al3+ uptake and lipid peroxidation level also increased concomitantly under Al treatment. Histochemical assay were also performed to elucidate uptake of aluminum, loss of membrane integrity and lipid peroxidation, which were found to be more in sensitive genotypes at higher Al concentration. This study revealed that aluminum toxicity is a serious harmful problem for rice crop productivity in acid soil. Based on various parameters studied it's concluded that Disang is a comparatively tolerant variety whereas Joymati a sensitive variety. Western blot hybridization further strengthened the claim, as it demonstrated more accumulation of Glutathione reductase (GR) protein in Disang rice variety than Joymati under stressed condition. This study also observed that the emergence of lethal toxic symptoms occurs only after 48h irrespective of the dose used in the study.

  3. Morpho-physiological analysis of tolerance to aluminum toxicity in rice varieties of North East India.

    Directory of Open Access Journals (Sweden)

    Jay Prakash Awasthi

    Full Text Available Aluminum (Al is the third most abundant metal in earth crust, whose chemical form is mainly dependent on soil pH. The most toxic form of Al with respect to plants is Al3+, which exists in soil pH <5. Acidic soil significantly limits crop production mainly due to Al3+ toxicity worldwide, impacting approximately 50% of the world's arable land (in North-Eastern India 80% soil are acidic. Al3+ toxicity in plants ensues root growth inhibition leading to less nutrient and water uptake impacting crop productivity as a whole. Rice is one of the chief grains which constitutes the staple food of two-third of the world population including India and is not untouched by Al3+ toxicity. Al contamination is a critical constraint to plant production in agricultural soils of North East India. 24 indigenous Indica rice varieties (including Badshahbhog as tolerant check and Mashuri as sensitive check were screened for Al stress tolerance in hydroponic plant growth system. Results show marked difference in growth parameters (relative growth rate, Root tolerance index, fresh and dry weight of root of rice seedlings due to Al (100 μM toxicity. Al3+ uptake and lipid peroxidation level also increased concomitantly under Al treatment. Histochemical assay were also performed to elucidate uptake of aluminum, loss of membrane integrity and lipid peroxidation, which were found to be more in sensitive genotypes at higher Al concentration. This study revealed that aluminum toxicity is a serious harmful problem for rice crop productivity in acid soil. Based on various parameters studied it's concluded that Disang is a comparatively tolerant variety whereas Joymati a sensitive variety. Western blot hybridization further strengthened the claim, as it demonstrated more accumulation of Glutathione reductase (GR protein in Disang rice variety than Joymati under stressed condition. This study also observed that the emergence of lethal toxic symptoms occurs only after 48h

  4. Health assessment of Arsenic and Zinc in rice cultivated in Fars province (Case Study: Firoozabad fields

    Directory of Open Access Journals (Sweden)

    M Cheraghi

    2013-11-01

    Full Text Available Food security along with the protection of environment has become a global issue.Accumulation of Arsenic and Zinc in rice is considered as a major problem for South-East Asia, where rice is a staple food. Given that, rice is considered as the highly consumed food in the diet of Iranian people, this study was conducted to estimate the concentrations of Zinc and Arsenic in rice cultivated in Firoozabad fields. For this purpose, 38 rice samples were collected from 22 nearby villages. Samples were digested by Digesdahl device and the concentrations of Arsenic and Zinc were determined by ICP. The results showed that the concentration (mean ± SD of Zinc was 20.87 ± 1.9 mg/kg of dry matter (ranged from 25.26 to 32.97; meanwhile mean value of Arsenic concentration was estimated at 22.89 ± 2.2 mg/kg of dry matter (ranged from 17.61 to 26.77.Comparing the concentrations of Arsenic and Zinc in rice samples with the standard limit set by WHO/FAO it was revealed that Arsenic concentrations in 100% of the samples were higher than standard level, whereas Zinc concentrations in 97.36% of the samples were below the limit.

  5. Phosphorus utilization by three rice varieties at different stages of growth in a vertisol

    International Nuclear Information System (INIS)

    Rastogi, A.K.; Mahajan, J.P.; Sinha, S.B.

    1981-01-01

    A pot experiment was conducted using labelled superphosphate to study the utilization of applied fertilizer phosphorus by three rice varieties, viz., Jaya, Ratna and Sona at tillering, flowering and harvesting stages. Total phosphorus uptake and phosphorus derived from fertilizer increased significantly with increasing level of phosphorus, but per cent utilization of applied phosphorus showed a reverse trend in all the three varieties at all the growth stages. Dry matter yield in general, increased significantly with increasing P levels in all the three varieties. Average soil-p uptake decreased with increasing levels of phosphorus at all the stages. (author)

  6. Value added products with popular low grade rice varieties of Andhra Pradesh.

    Science.gov (United States)

    Anitha, G; Rajyalakshmi, P

    2014-12-01

    Eight Popular Low Grade Rice Varieties (PLRVs) MTU 3626, MTU 1001, MTU 1010, MTU 4870 and NLR 145, NLR 34242, NLR 30491, NLR 34449, (developed and released by ANGR agricultural University, Andhra Pradesh) having poor cooking quality were selected for the study. ANGRAU variety BPT 5204 popularly consumed as staple rice was used as check. Eight products of traditional/commercial importance were standardized incorporating PLRVs as a major ingredient in the form of rice flour (burfi, noodles and extruded snack product and vennaundalu (butter coated balls), palathalikalu (dough rolled into strips, steamed/cooked in milk); rice semolina (instant kheer mix and instant upma mix), and flaked rice (nutritious bar). The products were evaluated for nutritional, cooking quality characteristics, consumer acceptability and shelf-life. Consumer acceptability of the PLR products was carried out with 60 farm women based on 9 point hedonic scale. Shelf-life of the products (packed in both metalized PP and PE pouches) was evaluated monthly for chemical, microbiological and sensory parameters. Energy values of control and PLR products showed no significant difference. Upon cooking, PLR Noodles showed no significant difference with water absorption and volume but more (p instant kheer mix (92%) and extruded product (88%). As per sensory scores, all the PLR products were well accepted with no observable changes in flavor or taste upon storage. PLR products showed increased (P noodles and highest for burfi (though in safe limits). Extruded snacks (control and PLR) showed no microbial growth during the entire storage period. Considering the poor marketability of PLRVs for consumption as staple rice, the study signifies the utilitarian value of PLRVs in making products of convenience/commercial importance.

  7. An economic evaluation comparison of solar water pumping system with engine pumping system for rice cultivation

    Science.gov (United States)

    Treephak, Kasem; Thongpron, Jutturit; Somsak, Dhirasak; Saelao, Jeerawan; Patcharaprakiti, Nopporn

    2015-08-01

    In this paper we propose the design and economic evaluation of the water pumping systems for rice cultivation using solar energy, gasoline fuel and compare both systems. The design of the water and gasoline engine pumping system were evaluated. The gasoline fuel cost used in rice cultivation in an area of 1.6 acres. Under same conditions of water pumping system is replaced by the photovoltaic system which is composed of a solar panel, a converter and an electric motor pump which is compose of a direct current (DC) motor or an alternating current (AC) motor with an inverter. In addition, the battery is installed to increase the efficiency and productivity of rice cultivation. In order to verify, the simulation and economic evaluation of the storage energy battery system with batteries and without batteries are carried out. Finally the cost of four solar pumping systems was evaluated and compared with that of the gasoline pump. The results showed that the solar pumping system can be used to replace the gasoline water pumping system and DC solar pump has a payback less than 10 years. The systems that can payback the fastest is the DC solar pumping system without batteries storage system. The system the can payback the slowest is AC solar pumping system with batteries storage system. However, VAC motor pump of 220 V can be more easily maintained than the motor pump of 24 VDC and batteries back up system can supply a more stable power to the pump system.

  8. PERFORMANCE OF UPLAND RICE PROMISING LINES AND VARIETIES AS INTERCROPPING OF PLANTATION

    Directory of Open Access Journals (Sweden)

    Amrizal Yusuf

    2013-01-01

    Full Text Available In 2008, introduction of upland rice promising lines and varieties as intercropping rubber plant had been done at Sibunga-Bunga Hilir village STM Hulu Sub District, Deli Serdang District, North Sumatra Province, there are two promise line and two pre-eminent upland rice varieties were planted among six until 18 mounths old rubber plants. Aim of this assessment was to improving productivity and farmers income through the utilization of land available under rubber plants by upland rice. The assessment was conducted using 2.0 ha upland done by three cooperator farmers and 1, 5 ha done by non-cooperator farmers. The activity was started in September 2008 and was completed January 2009. A field day was done on 13 January 2009. The result of the assessment showed that TB409-B-TB-14-3 promise lines gave the highest yield (4.32 t per ha, followed by TB490C-TB-1-2-1 (4, 28 t per ha, Situ Patenggang variety (3.66 t per ha and Limboto variety (3.17 t per ha. The financial analysis for TB409-B-TB-14-3 promise line showed that net profit of IDR 5.42 m per ha, with a B/C ratio of 0.63. Break event point was reached at IDR 1.989 per kg giving positive margin of IDR 1.211 per kg.

  9. Physicochemical properties of brown rice as influenced by gamma irradiation, variety and storage

    International Nuclear Information System (INIS)

    Sabularse, V.C.

    1988-01-01

    Effects of gamma irradiation, variety and storage on physicochemical properties of brown rice from three Louisiana rice varieties: Mars, a medium grain variety, Lemont and Tebonnet, long grain varieties, were determined. Cooking time was significantly reduced in Mars and Lemont at doses of 200 and 300 Krads. Irradiation increased cooking rate, water uptake at 80 degree C, water uptake ratios, total solids content in residual cooking liquid and starch damage from 100 to 300 Krad samples. Water uptake at 96 degree C generally decreased with increasing dose levels. Evidence indicated alterations in the rice grain structures and composition. The component drastically affected by gamma irradiation was starch as shown by reduced cooking time, increased water uptake, increased amounts of starch and protein in residual cooking liquid, reduced volume expansion, increased damage starch and changes in amylographic pasting characteristics. Scanning electron microscopy showed more simple starch granules in irradiated samples than in nonirradiated samples. Structural changes in the bran layer due to gamma irradiation were not evident from electron micrographs

  10. Effects of Nitrogen Application Time on Caryopsis Development and Grain Quality of Rice Variety Yangdao 6

    Directory of Open Access Journals (Sweden)

    Fei XIONG

    2008-03-01

    Full Text Available A pot experiment was conducted to study the effects of different nitrogen application time (during the tillering or the booting stages with the same nitrogen rates on the caryopsis development and grain quality of rice variety Yangdao 6. The increased nitrogen fertilizer (urea, especially applied during the booting stage, could evidently increase the milled rice rate, head rice rate and protein content in rice grains compared with the control (no nitrogen application, and decrease chalky grain rate and amylose content. Moreover, the increased nitrogen fertilizer significantly affected the caryopsis development and enhanced the grain weight when nitrogen applied during the tillering and the booting stages, especially during the booting stage. During caryopsis development the increased nitrogen fertilizer applied during the tillering and booting stages could obviously decrease the total starch and amylose contents, but not obviously for the amylopectin content in rice grain. Increased topdressing of nitrogen fertilizer, especially applied during the booting stage, had significant effect on the development and structures of amyloplasts and proteinoplasts. That is, it could change the distribution, number and shape of amyloplasts and proteinoplasts in the endosperm cells especially in grain abdomen. Compared with the control the arrangements of amyloplasts and proteinoplasts were closer, with more numbers, higher density and less interspaces each ohter. Furthermore, most amyloplasts showed polyhedron under the increased nitrogen fertilizer level.

  11. Comparative studies on flour proximate compositions and functional properties of selected Pakistani rice varieties

    International Nuclear Information System (INIS)

    Jamal, S.; Qazi, I.M.; Ahmed, I.

    2016-01-01

    The aim of this study was to evaluate the proximate and functional properties of flours obtained from various rice varieties, i.e., Super Basmati Shaheen, Super Basmati Kainat, Super Fine, JP5, Basmati 385, Fakhr-e-Malakand grown in different areas of Pakistan. Moisture content, ash content, crude protein, crude fat, water absorption index, water solubility and swelling power varied significantly (P<0.05) from each other. Moisture content, ash content, crude protein and crude fat of rice flour ranged from 5.46-7.08 percentage, 0.48-1.23 percentage, 8.02-9.85 percentage and 0.43-1.5 percentage, respectively. While, functional properties such as water absorption index, water solubility index and swelling power were found in the range of 5.38-6.26 (g/g), 1.95-4.94 percentage and 5.74-7.64 (g/g), respectively. The results showed that the functional properties of rice flour were greatly influenced by the compositional variations of various rice varieties. (author)

  12. Radioactivity of long-lived gamma emitters in some rice varieties in the Philippines

    International Nuclear Information System (INIS)

    Soriano, Jhon Cris N.

    2016-06-01

    This study measured the activity concentrations of Uranium-238 (U-238), Thorium-232 (Th-232), and Potassium-40 (K-40) in five of the widely consumed rice varieties in the Philippines using a NaI (Tl) scintillation detector. To determine the uptake of radionuclides of these varieties, the activity concentrations in soil were measured and the transfer factor was calculated. Results showed that the activity concentrations of rice ranged from Not Detected (ND) to 0.579 Bq/kg U-238, ND-1.575 BQ/kg for TH-232, and 44.66014526-106.0412811 Bq/kg for K-40. These values are lower than the activity concentration in soil (0.495-5.327 Bq/kg for U-238, 0.459-6.291 Bq/kg for Th-232, and 104.433-351.405 Bq/kg for K-40). These results show that the activity concentrations in the soil do not reflect the activity concentrations in rice. The transfer factors computed range from ND-1.021 for U-238, ND-0.384 for Th-232, 0.127090299- 0.926872575 for K-40. The Average Annual Committed Effective Doses (AACEDs) in this study were found to be lower than the worldwide average ingestion exposure (290 μSv) reported by the United Nations Scientific Committee on the Effects of Atomic Radiation (UNSCEAR). The results suggest that consumption of rice pose no radiological health risk to Filipinos. (author)

  13. Evaluating non-aromatic rice varieties for growth and yield different rates of soil applied boron

    International Nuclear Information System (INIS)

    Shah, J.A.; Abbas, M.; Memon, M.Y.; Raid, N.

    2016-01-01

    Balanced boron (B) fertilization has prime importance to obtain maximum paddy yield. The range between B deficiency and toxicity is smaller than most plant nutrients, though B requirement among different crops varies widely. The adequate dose of B for one genotype can either be insufficient or toxic to other. Hence, without knowing the actual requirements of crop varieties, B application can be risky due to the toxicity hazards. A field experiment was undertaken at experimental farm of Nuclear Institute of Agriculture (NIA), Tandojam during 2013, to evaluate the B requirement of two non-aromatic rice varieties.The experiment was arranged in split plot design with three repeats. Two rice varieties Sarshar and Shandar were grown in main plots with four rates of B: 0.5, 1.0, 1.5 and 2.0 kg ha/sup -1/ and control (0 kg ha/sup -1/) in sub plots. Both the varieties responded differently to B rates. Sarshar produced the highest paddy yield (5691 kg ha/sup -1/) at a rate of 1.5 kg B ha/sup -1/ and was 18% greater than control, Shandar produced the highest yield (6075 kg ha/sup -1/) at a rate of 1.0 kg B ha/sup -1/ and was 5% greater than control. B accumulation in paddy and straw of both varieties increased with the increasing B rates. Both varieties were also significantly (p<0.05) varied in B accumulations. Comparatively, rice variety Sarshar accumulated 9% and 22% more B in straw and paddy than the Shandar. Thus, the B requirement of Sarshar was relatively higher than the Shandar. Shandar can be grown without the additional B application, whereas, Sarshar requires additional B for its maximum harvest in B deficient soils. (author)

  14. Antioxidant potential of brans of twenty-nine red and white rice (Oryza sativa L. varieties of Sri Lanka

    Directory of Open Access Journals (Sweden)

    Walimuni Kanchana Subhashini Mendis Abeysekera

    2017-11-01

    Full Text Available Objective: To evaluate antioxidant properties of brans of twenty-nine red and white rice varieties of Sri Lanka. Methods: Brans of 21 new improved (NI, 2 old improved (OI and 6 traditional red and white rice varieties of Sri Lanka were studied for range of antioxidant properties. The studied antioxidant properties included total polyphenolic content (TPC, ferric reducing antioxidant power (FRAP, oxygen radical absorbance capacity (ORAC, 2,2’-azino-bis(3- ethylbenzothiazoline-6-sulfonic acid (ABTS radical scavenging activity and 1,1-diphenyl- 2-picrylhydrazine (DPPH radical scavenging activity in vitro. Bran of black rice variety from Korea was also studied for the same antioxidant properties for comparison. Results: Results exhibited significantly high ABTS and DPPH radical scavenging activities and 10, 7 and 2.5 fold greater TPC, FRAP and ORAC activities in brans of red rices (BRRs compared to brans of white rices irrespective of NI, OI and traditional rice types. Among BRRs traditional varieties had greater ABTS and DPPH radical scavenging activities and 1.7, 1.3 and 1.2 fold respectively greater TPC, FRAP and ORAC in contrast to NI red rices. Traditional red rice varieties, Kalu Heeneti (TPC and ORAC, Pachchaperumal (TPC and DPPH and Kurulu Thuda (DPPH and OI red rice variety H4 (FRAP exhibited the highest activities for the antioxidant properties studied. Further, these varieties had significantly high activities compared to black rice. Conclusions: In conclusion, BRRs especially traditional red rices had greater antioxidant properties and consumption may be useful in managing various chronic diseases.

  15. Genetic variability for water deficiency tolerance in upland and lowland rice germplasm and prospects of its transfer to basmati rice varieties (abstract)

    International Nuclear Information System (INIS)

    Farooq, S.; Iqbal, N.; Arshad, R.

    2005-01-01

    Rice germplasm consisting of five local basmati (fine grain aromatic) rice cultivars. IR-6, CP-1 (Chinese variety), 19 lines/landraces from WARDA, and 7 varieties/lines from CUBA were tested for tolerance to water deficiency. Material was directly sown in the field blocks maintained at normal flooded conditions (Control) and at 75%, 50% and 25% less water. Fertilizer was applied at the normal recommended doze. Data are collected with reference to plant height, number of leaves and productive tillers, and grain yield. Presence (or otherwise) of any stress protein in selected water deficiency tolerant lines was also studied. Significant variations were observed for all the parameters and in all the material. In 19 (57.6%) entries comprising IR-6, CP-I, material from WARDA and Cuba, number of tillers and leaves were the highest at 50% water compared to the control. In 10 (30.3%) and 8 (24%) entries, plant height increased by 31.7% and 61.3 %, respectively at 25% and 50% water. Only 5 out of 33 entries performed the best with respect to all the three parameters at 25% water. Grain yield in most of the entries (17 out of 33) also increased under 50% water with 9 entries (27.4) simply out yielded the rest under 25% reduced water. Promising among them were WAB 56-104, WAB-56-50 and OS-6. Appearance of some LMW protein fractions of about 40 and 20 kDa was also noticed in these genotypes for the first time. Crossing these genotypes with Basmati varieties, that showed reduction in all the 4 parameters under water deficient conditions, resulted in production of fertile hybrids. Selections in F2 population were made from the plants growing under 50% less water and for plants like of Basmati with early maturity and reduced height. One of the selections also exhibited LMW fractions of 20 kDa stress protein. The association of this fraction with water deficiency tolerance would be tested in M3 generation. We believe that if during this process we are able to reduce 50 % of water

  16. Impact of Water Management on Rice Varieties, Yield, and Water Productivity under the System of Rice Intensification in Southern Taiwan

    Directory of Open Access Journals (Sweden)

    Victoriano Joseph Pascual

    2016-12-01

    Full Text Available The system of rice intensification (SRI uses less water and enhances rice yield through synergy among several agronomic management practices. This claim was investigated to determine the effects of crop growth, yield and irrigation water use, using two thirds of the recommended SRI practices and two rice varieties, namely Tainan11 (TN11 and Tidung30 (TD30. Irrigation regimes were (a intermittent irrigation with three-day intervals (TD303 and TN113; (b intermittent irrigation with seven-day intervals (TD307 and TN117 and (c continuous flooding (TD30F and TN11F. Results showed that intermittent irrigation of three- and seven-day intervals produced water savings of 55% and 74% compared with continuous flooding. Total water productivity was greater with intermittent irrigation at seven-day intervals producing 0.35 kg·grain/m3 (TN117 and 0.46 kg·grain/m3 (TD307. Average daily headed panicle reduced by 166% and 196% for TN113 and TN117 compared with TN11F, with similar reduction recorded for TD303 (150% and TD307 (156% compared with TD30F. Grain yield of TD30 was comparable among irrigation regimes; however, it reduced by 30.29% in TN117 compared to TN11F. Plant height and leaf area were greater in plants exposed to intermittent irrigation of three-day intervals.

  17. Yield gap analysis in long-term experiments with intensive rice cultivation

    International Nuclear Information System (INIS)

    Laureles, E.V.; Correa, T. Jr.; Buresh, R.J.

    2007-01-01

    The long-term continuous cropping experiment at IRRI is cultivated with three rice crops in a year, making it the world's most intensively cropped long-term rice experiment. The availability of comprehensive rice production records, compiled weather data, and tested crop models provides a means to evaluate long-term trends in measured and potential yields and yield gaps in this rice production system. Yield trends were assessed using the highest yielding cultivar in each cropping season from 1979 to 2005. Potential yield of the highest yielding cultivar in each season was determined using three rice models (ORYZA, TERM, and CERES) run with the actual transplanting and harvest dates for the cultivar. The yield gap was determined from the difference between the simulated potential grain yield and the measured grain yield. Measured and potential yields and the yield gap varied across seasons and years. Measured yields were higher in the dry season than in the early and late wet seasons. The yield gap tended to be higher in the wet season than in the dry season. Climatic parameters, particularly solar radiation, influenced the performance of rice cultivars. The relatively larger yield gaps in the late wet season than in the dry season were associated with increased spikelet sterility. The cumulative measured yield for the three annual rice crop was near 80 percent of the annual yield potential in years with best practices for fertilizer N and crop management. The long term trends suggest that effective timing and rates of N fertilization and effective control of diseases were critical in achieving 80 percent of the annual yield potential

  18. Physico-chemical changes in grains of some advance lines/ varieties of rice (oryza sativa l.) after parboiling

    International Nuclear Information System (INIS)

    Akhter, M.; Haider, Z.

    2014-01-01

    Some of the advance lines/varieties developed at Rice Research Institute, Kala Shah Kaku, including approved fragrant (Basmati) rice variety i.e., Basmati-2000, were used to assess interactive efficacy of parboiling on these varieties/lines and practical expediency of using standardized parboiling technique for improving nutritional, milling and cooking qualities of these lines/varieties. For this purpose, white milled and parboiled rice samples of ten lines/varieties were analyzed for nutritional quality parameters such as ash, dry matter, crude fat, crude protein, crude fiber, vitamin B6; milling quality parameters such as total milling recovery, head rice recovery, ratio of broken grains and cooking quality parameters such as curling, bursting and cooked grain length. The study showed significant variation in efficacy of parboiling to different varieties/lines. The results clearly showed average increase in mineral contents in terms of ash% increase, dry matter, longer cooked grain length and considerable rise in vitamin B6 contents, higher total milling recovery and head rice recovery in almost all the samples. While crude fiber, crude protein and crude fat decreased non-significantly. Furthermore, quality reducing factors such as number of broken grains, bursting and curling percentage of cooked rice were also reduced significantly in parboiled samples. It may, therefore, be suggested that parboiling offers a better alternative to conserve and increase nutritional, milling and cooking quality values of rice varieties/lines. Less percentage of broken, burst and curled grains may result in augmented net income. (author)

  19. Physical, milling, cooking, and pasting characteristics of different rice varieties grown in the valley of Kashmir India

    Directory of Open Access Journals (Sweden)

    Tanveer Ahmad Rather

    2016-12-01

    Full Text Available In the present study, three different rice varieties, namely frome chena (FC, safaid chena (SC, and barkat chena (BC, were evaluated for various quality aspects in terms of physical, milling, cooking, and pasting characteristics. Among the three rice varieties SC had the highest thousand kernel weight and length breadth ratio (L/B. While as, BC had the lowest thousand kernel weight and FC had lowest L/B. Bulk density was found to be highest for FC followed by SC and BC. FC had density of 769.01 kg/m3. Milling characteristic in terms of broken percentage and head rice yield showed non-significant difference between the varieties. Head rice yield was below 70% in all the three varieties. All the three varieties took similar time to cook and cooking time varied non-significantly between 23.66 and 25.83 min. L/B ratio after cooking was found to be highest for FC followed by BC and SC. Elongation ratio of rice after cooking did not varied significantly between varieties. Elongation ratio after cooking ranged from 1.60 to 1.70. Pasting profile of rice flour was determined using rapid visco analyzer. Significant difference was observed in pasting profile of studied rice varieties.

  20. Determination of genetic variability of traditional varieties of Brazilian rice using microsatellite markers

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    Claudio Brondani

    2006-01-01

    Full Text Available The rice (Oryza sativa breeding program of the Rice and Bean research center of the Brazilian agricultural company Empresa Brasileira de Pesquisa Agropecuária (Embrapa is well established and provides new cultivars every year to attend the demand for improved high yielding varieties with tolerance to biotic and abiotic stresses. However, the elite genitors used to compose new populations for selection are closely related, contributing to the yield plateau reached in the last 20 years. To overcome this limit, it is necessary to broaden the genetic basis of the cultivars using diverse germplasm such as wild relatives or traditional varieties, with the latter being more practical because they are more easily crossed with elite germplasm to accelerate the recovery of modern plant types in the breeding lines. The objective of our study was to characterize the allelic diversity of 192 traditional varieties of Brazilian rice using 12 simple sequence repeat (SSR or microsatellite markers. The germplasm was divided into 39 groups by common name similarity. A total of 176 alleles were detected, 30 of which (from 23 accessions were exclusive. The number of alleles per marker ranged from 6 to 22, with an average of 14.6 alleles per locus. We identified 16 accessions as a mixture of pure lines or heterozygous plants. Dendrogram analysis identified six clusters of identical accessions with different common names and just one cluster with identical accessions with the same common name, indicating that SSR markers are fundamental to determining the genetic relationship between landraces. A subset of 24 landraces, representatives of the 13 similarity groups plus the 11 accessions not grouped, was the most variable set of genotypes analyzed. These accessions can be used as genitors to increase the genetic variability available to rice breeding programs.

  1. Genetic diversity analysis of Cuban traditional rice (Oryza sativa L. varieties based on microsatellite markers

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    Alba Alvarez

    2007-01-01

    Full Text Available Microsatellite polymorphism was studied in a sample of 39 traditional rice (Oryza sativa L. varieties and 11 improved varieties widely planted in Cuba. The study was aimed at assessing the extent of genetic variation in traditional and improved varieties and to establish their genetic relationship for breeding purposes. Heterozygosity was analyzed at each microsatellite loci and for each genotype using 10 microsatellite primer pairs. Between varieties genetic relationship was estimated. The number of alleles per microsatellite loci was 4 to 8, averaging 6.6 alleles per locus. Higher heterozygosity (H was found in traditional varieties (H TV = 0.72 than in improved varieties (H IV = 0.42, and 68% of the total microsatellite alleles were found exclusively in the traditional varieties. Genetic diversity, represented by cluster analysis, indicated three different genetic groups based on their origin. Genetic relationship estimates based on the proportion of microsatellite loci with shared alleles indicated that the majority of traditional varieties were poorly related to the improved varieties. We also discuss the more efficient use of the available genetic diversity in future programs involving genetic crosses.

  2. Evaluation of Bt (Bacillus thuringiensis) rice varieties against stem borer (Chilo suppressalis).

    Science.gov (United States)

    Kiani, Ghaffar; Nematzadeh, Ghorban Ali; Ghareyazie, Behzad; Sattari, Majid

    2008-02-15

    Three transgenic rice varieties namely Khazar, Neda and Nemat, all containing a cry1Ab gene, were evaluated through PCR analysis and field examinations for their resistance at natural infestation of insect pests during 2007. The results showed that all transgenic varieties produced 1.2 kb PCR product derived from application of cry1Ab gene. In field conditions, transgenic varieties exhibited high levels of resistance against natural infestation of stem borer and the damaged plants based on dead heart or white heat for them were less than 1%. Moreover, in stem-cut bioassay 100% of released larvae died within four days after infestation. These results demonstrate that expression of cry1Ab gene in the genome of transgenic varieties provided season-long protection from the natural infestation of lepidopteran insects.

  3. Multi-trait evolution of farmer varieties of bread wheat after cultivation in contrasting organic farming systems in Europe.

    Science.gov (United States)

    Dawson, J C; Serpolay, E; Giuliano, S; Schermann, N; Galic, N; Chable, V; Goldringer, I

    2012-03-01

    Because of the lack of varieties for organic agriculture, associations of organic farmers in several European countries have begun cultivating landraces and historic varieties, effectively practicing in situ conservation of agricultural biodiversity. To promote agrobiodiversity conservation, a special list for "conservation varieties" was implemented in 2008 by the EU because for any exchange and marketing of seeds in the EU, a variety must be registered in an official catalog. Our study aimed at improving knowledge on the phenotypic diversity and evolution of such varieties when cultivated on organic farms in Europe, in order to better define their specific characteristics and the implications for the registration process. We assessed multi-trait phenotypic evolution in eight European landraces and historic varieties of bread wheat and in two pureline variety checks, each grown by eight organic farmers over 2 years and then evaluated in a common garden experiment at an organic research farm. Measurements on each farmer's version of each variety included several standard evaluation criteria for assessing distinctness, uniformity and stability for variety registration. Significant phenotypic differentiation was found among farmers' versions of each variety. Some varieties showed considerable variation among versions while others showed fewer phenotypic changes, even in comparison to the two checks. Although farmers' variety would not satisfy uniformity or stability criteria as defined in the catalog evaluation requirements, each variety remained distinct when assessed using multivariate analysis. The amount of differentiation may be related to the initial genetic diversity within landraces and historic varieties.

  4. Water Productivity of Irrigated Rice under Transplanting, Wet Seeding and Dry Seeding Methods of Cultivation

    Directory of Open Access Journals (Sweden)

    Murali, NS.

    1997-01-01

    Full Text Available Water productivity (WP of irrigated lowland rice was determined during the 1994 dry (January to May and wet (August to December seasons on a heavy clay acid sulphate soil. Treatments consisted of three cultivation methods : transplanted rice, pregerminated seeds broadcasted on puddled soil (wet seeding and dry seeds broadcasted on unpuddled soil (dry seeding. In wet and dry seeded plots, continuous standing water condition was initiated 17 days after sowing. Total water requirement for rice production was highest in transplanted plots (755 mm in wet season and 1154 mm in dry season and was lowest in dry seeded plots (505 mm in wet season and 1040 mm in dry season. Dry seeding required no water for land preparation but transplanting and wet seeding methods required 18 - 20 % of total water requirement in dry season and 27 - 29 % in wet season. Total percolation was maximum (99 mm in wet season and 215 mm in dry season in dry seeding method and was minimum (62 mm in wet season and 94 mm in dry season in transplanting method. In dry and wet seeding methods, daily percolation gradually decreased with the age of the crop. Total seepage loss did not show any significant difference between the cultivation methods in the two seasons. Grain yield was not affected by the three cultivation methods in both seasons. Water productivity (the ratio between grain yield and total amount of water used in production was 3.5 - 4.1 kg ha-1 mm-1, 3.8 - 4.4 kg ha-1 mm-1 and 4.1 - 5.5 kg ha-1 mm-1 in transplanted, wet seeded and dry seeded rice, respectively. Labour requirement for land preparation and sowing was maximum in transplanted (219 - 226 man-hours ha-1 followed by wet (104 -112 man-hours ha-1 and dry seeded (94 - 99 man-hours ha-1 methods. However, in wet season extra labour (77 man-hours ha-1 was required for weeding after crop establishment in dry and wet seeding methods. Crop maturity was 20 days earlier in wet and dry seeding methods compared to

  5. Responses of Four Rice Varieties to Elevated CO2 and Different Salinity Levels

    Directory of Open Access Journals (Sweden)

    Sheidollah Kazemi

    2018-05-01

    Full Text Available Abstract:: This study was carried out in 2014 at Isfahan University of Technology, Iran, to evaluate the responses of four rice varieties (Neda, Deylamani, Shiroudi and Domsorkh to ambient (360 ± 50 μmol/mol and elevated (700 ± 50 μmol/mol air carbon dioxide (CO2 concentrations under four salinity levels (0, 30, 60 and 90 mmol/L NaCl. There was significant variation among rice varieties in response to elevated CO2 concentration under the four salinity levels. Under non-saline condition, elevated CO2 increased the dry weight of Neda, Deylamani and Domsorkh by 8%, 50% and 8%, respectively, but reversely decreased that of Shiroudi by 34%. Increasing CO2 concentration significantly reduced the negative effects of salinity on Shiroudi, but these effects were even increased in Deylamani and Domsorkh under all the salinity levels and in Neda only under 30 and 60 mmol/L NaCl. Significant correlations were established between plant dry weight, SPAD value and leaf area under both CO2 levels. However, this trend was observed only at ambient CO2 concentration in the presence of soluble carbohydrates. The results revealed the genotype and salinity dependence of the effects of CO2 concentrations on the rice traits investigated. Key words: CO2 concentration, genetic diversity, salt tolerance, water soluble carbohydrate

  6. Root Associated Bacillus sp. Improves Growth, Yield and Zinc Translocation for Basmati Rice (Oryza sativa) Varieties

    Science.gov (United States)

    Shakeel, Muhammad; Rais, Afroz; Hassan, Muhammad Nadeem; Hafeez, Fauzia Yusuf

    2015-01-01

    Plant associated rhizobacteria prevailing in different agro-ecosystems exhibit multiple traits which could be utilized in various aspect of sustainable agriculture. Two hundred thirty four isolates were obtained from the roots of basmati-385 and basmati super rice varieties growing in clay loam and saline soil at different locations of Punjab (Pakistan). Out of 234 isolates, 27 were able to solubilize zinc (Zn) from different Zn ores like zinc phosphate [Zn3 (PO4)2], zinc carbonate (ZnCO3) and zinc oxide (ZnO). The strain SH-10 with maximum Zn solubilization zone of 24 mm on Zn3 (PO4)2ore and strain SH-17 with maximum Zn solubilization zone of 14–15 mm on ZnO and ZnCO3ores were selected for further studies. These two strains solubilized phosphorous (P) and potassium (K) in vitro with a solubilization zone of 38–46 mm and 47–55 mm respectively. The strains also suppressed economically important rice pathogens Pyricularia oryzae and Fusarium moniliforme by 22–29% and produced various biocontrol determinants in vitro. The strains enhanced Zn translocation toward grains and increased yield of basmati-385 and super basmati rice varieties by 22–49% and 18–47% respectively. The Zn solubilizing strains were identified as Bacillus sp. and Bacillus cereus by 16S rRNA gene analysis. PMID:26635754

  7. Resistant Starch: Variation among High Amylose Rice Varieties and Its Relationship with Apparent Amylose Content, Pasting Properties and Cooking Methods

    Science.gov (United States)

    Resistant starch (RS), which is not hydrolyzed in the small intestines, has proposed health benefits. We evaluated a set of 40 high amylose rice varieties for RS levels in cooked rice and approximately a 1.9-fold difference was found. The highest ones had more than two-fold greater RS concentration ...

  8. Development of New Submergence Tolerant Rice Variety for Bangladesh Using Marker-Assisted Backcrossing

    Directory of Open Access Journals (Sweden)

    Khandakar Md Iftekharuddaula

    2015-01-01

    Full Text Available Submergence tolerant high yielding rice variety was developed using BR11 as a recipient parent applying foreground, phenotypic and background selection approaches. Recombinant selection was found essential to minimize linkage drag by BC2F2 generation. Without recombinant selection, the introgression size in the backcross recombinant lines (BRLs was approximately 15 Mb on the carrier chromosome. The BRLs were found submergence tolerance compared to the check varieties under complete submergence for two weeks at Bangladesh Rice Research Institute, and produced higher yield compared to the isogenic Sub1-line under controlled submerged condition. The BRL IR85260-66-654-Gaz2 was released as BRRI dhan52 in 2010, which was the first high yielding submergence tolerant variety in Bangladesh. BRRI dhan52 produced grain yield ranging from 4.2 to 5.2 t/hm2 under different flash flood prone areas of Bangladesh in three consecutive seasons. The study demonstrated the efficiency of recombinant selection and better adaptability of the newly released submergence tolerant high yielding variety in flash flood prone different areas of the country with respect to submergence tolerance and yield potential.

  9. Factors Affecting Adoption of Improved Rice Varieties among Rural Farm Households in Central Nepal

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    Raju Ghimire

    2015-01-01

    Full Text Available The use of improved high yielding crop varieties is an important avenue for reducing hunger and food insecurity in developing countries. Using cross-sectional data obtained from a survey conducted during 2013 crop season, we performed a probit model (plot-level analysis to determine the probability of adopting new improved rice varieties (NIRVs by smallholder farmers particularly from two main agro-ecological regions (hills and tropical plain terai regions of Central Nepal. The results revealed that education, extension services and seed access play significant roles in adoption decisions. Additionally, farm and field characteristic variables such as farm size, endowment of favorable land type (e.g. lowlands, and animal power (e.g. oxen are the key factors influencing the probability of adopting NIRVs. The results showed that technology specific variables (e.g. yield potential and acceptability are significant for explaining adoption behavior, implying that it is important to take farmers’ preferences to varietal characteristics into consideration in the design of a research and development program. Given the significant role played by extension and access related variables, increased emphasis on information dissemination, field demonstration, and farmers’ participatory research and training programs to popularize new rice varieties and enhance their adoption rate are required. This also suggests that policy intervention should be made on improving the educational status of farming households, and developing programs on varietal package of rice seed which offer farmers a variety of choices among the appropriate pools of germplasm. Such programs ultimately help farmers develop more profit-oriented behavior which are necessary to enhance adoption rate, production and food security in the long run.

  10. Consumer Acceptance and Preference Study [CAPS] on Brown and Under Milled Indian Rice Varieties in Chennai, India

    Science.gov (United States)

    Sudha, Vasudevan; Spiegelman, Donna; Hong, Biling; Malik, Vasanti; Jones, Clara; Wedick, Nicole M.; Hu, Frank B.; Willett, Walter; Bai, Mookambika Ramya; Ponnalagu, Muthu Mariyammal; Arumugam, Kokila; Mohan, Viswanathan

    2013-01-01

    Objectives To study consumer acceptance of unmilled brown and under milled rice among urban south Indians. Methods Overweight and normal weight adults living in slum and non-slum residences in Chennai participated (n=82). Bapatla (BPT) and Uma (red pigmented) rice varieties were chosen. These rice varieties were dehusked (unmilled, 0% polish) and further milled to 2.3% and 4.4% polishing (under milled). Thus nine rice samples in both raw and parboiled forms were provided for consumer tasting over a period of three days. A hedonic 7-point scale was used to rate the consumer preferences. A validated questionnaire was used to collect demographic, anthropometric, medical history, physical activity, dietary intake data and willingness of the consumers to switch over to brown rice. Results Consumers reported that the color, appearance, texture, taste and overall quality of the 4.4% polished rice was strongly preferred in both varieties and forms. Ratings for 0% polished (brown rice) were substantially lower than those of 2.3% polished rice, which were intermediate in ratings between 0% and 4.4% polishing. However, most of the consumers (93%) expressed willingness to substitute brown or 2.3% polished rice if affordable after the taste tests and education on nutritional and health benefits of whole grains. Conclusion While most consumers’ preferred polished white rice, education regarding health benefits may help this population switch to brown or under milled rice. Cooking quality and appearance of the grains were perceived as the most important factors to consider when purchasing rice among Chennai urban adults. PMID:24015699

  11. Agriculture and the promotion of insect pests: rice cultivation in river floodplains and malaria vectors in The Gambia

    Directory of Open Access Journals (Sweden)

    Louca Vasilis

    2009-07-01

    Full Text Available Abstract Background Anthropogenic modification of natural habitats can create conditions in which pest species associated with humans can thrive. In order to mitigate for these changes, it is necessary to determine which aspects of human management are associated with the promotion of those pests. Anopheles gambiae, the main Africa malaria vector, often breeds in rice fields. Here the impact of the ancient practice of 'swamp rice' cultivation, on the floodplains of the Gambia River, on the production of anopheline mosquitoes was investigated. Methods Routine surveys were carried out along 500 m transects crossing rice fields from the landward edge of the floodplains to the river during the 2006 rainy season. Aquatic invertebrates were sampled using area samplers and emergence traps and fish sampled using nets. Semi-field experiments were used to investigate whether nutrients used for swamp rice cultivation affected mosquito larval abundance. Results At the beginning of the rainy season rice is grown on the landward edge of the floodplain; the first area to flood with fresh water and one rich in cattle dung. Later, rice plants are transplanted close to the river, the last area to dry out on the floodplain. Nearly all larval and adult stages of malaria vectors were collected 0–100 m from the landward edge of the floodplains, where immature rice plants were grown. These paddies contained stagnant freshwater with high quantities of cattle faeces. Semi-field studies demonstrated that cattle faeces nearly doubled the number of anopheline larvae compared with untreated water. Conclusion Swamp rice cultivation creates ideal breeding sites for malaria vectors. However, only those close to the landward edge harboured vectors. These sites were productive since they were large areas of standing freshwater, rich in nutrients, protected from fish, and situated close to human habitation, where egg-laying mosquitoes from the villages had short distances to

  12. In vitro assessment on the impact of soil arsenic in the eight rice varieties of West Bengal, India.

    Science.gov (United States)

    Bhattacharya, Piyal; Samal, Alok C; Majumdar, Jayjit; Banerjee, Satabdi; Santra, Subhas C

    2013-11-15

    Rice is an efficient accumulator of arsenic and thus irrigation with arsenic-contaminated groundwater and soil may induce human health hazard via water-soil-plant-human pathway. A greenhouse pot experiment was conducted on three high yielding, one hybrid and four local rice varieties to investigate the uptake, distribution and phytotoxicity of arsenic in rice plant. 5, 10, 20, 30 and 40 mg kg(-1) dry weights arsenic dosing was applied in pot soil and the results were compared with the control samples. All the studied high yielding and hybrid varieties (Ratna, IET 4094, IR 50 and Gangakaveri) were found to be higher accumulator of arsenic as compared to all but one local rice variety, Kerala Sundari. In these five rice varieties accumulation of arsenic in grain exceeded the WHO permissible limit (1.0 mg kg(-1)) at 20 mg kg(-1) arsenic dosing. Irrespective of variety, arsenic accumulation in different parts of rice plant was found to increase with increasing arsenic doses, but not at the same rate. A consistent negative correlation was established between soil arsenic and chlorophyll contents while carbohydrate accumulation depicted consistent positive correlation with increasing arsenic toxicity in rice plant. Copyright © 2012 Elsevier B.V. All rights reserved.

  13. Quantification of tocopherols, tocotrienols, and γ-oryzanol contents and their distribution in some commercial rice varieties in Taiwan.

    Science.gov (United States)

    Huang, Shao-Hua; Ng, Lean-Teik

    2011-10-26

    The eight vitamin E isomers [α-, β-, γ-, and δ-tocopherols (T) and α-, β-, γ-, and δ-tocotrienols (T3)] and γ-oryzanol are known to possess diverse biological activities. This study examined the contents of these compounds and their distribution in 16 commercial rice varieties in Taiwan. Results showed that the order of vitamin E, total T, total T3, and γ-oryzanol contents was rice bran > brown rice > rice husk > polished rice. γ-T3 was the highest vitamin E isomer present in all rice samples, while β-T, β-T3, δ-T, and δ-T3 were present in trace amounts. The Japonica varieties contained a higher total T, total T3, and γ-oryzanol than the Indica varieties. They also have a higher level of α-T and α-T3 but a lower level of γ-T and γ-T3 than the Indica varieties. However, no obvious difference in total T, total T3, and γ-oryzanol content was noted between black- and red-colored rice varieties.

  14. Loss of function at RAE2, a previously unidentified EPFL, is required for awnlessness in cultivated Asian rice.

    Science.gov (United States)

    Bessho-Uehara, Kanako; Wang, Diane R; Furuta, Tomoyuki; Minami, Anzu; Nagai, Keisuke; Gamuyao, Rico; Asano, Kenji; Angeles-Shim, Rosalyn B; Shimizu, Yoshihiro; Ayano, Madoka; Komeda, Norio; Doi, Kazuyuki; Miura, Kotaro; Toda, Yosuke; Kinoshita, Toshinori; Okuda, Satohiro; Higashiyama, Tetsuya; Nomoto, Mika; Tada, Yasuomi; Shinohara, Hidefumi; Matsubayashi, Yoshikatsu; Greenberg, Anthony; Wu, Jianzhong; Yasui, Hideshi; Yoshimura, Atsushi; Mori, Hitoshi; McCouch, Susan R; Ashikari, Motoyuki

    2016-08-09

    Domestication of crops based on artificial selection has contributed numerous beneficial traits for agriculture. Wild characteristics such as red pericarp and seed shattering were lost in both Asian (Oryza sativa) and African (Oryza glaberrima) cultivated rice species as a result of human selection on common genes. Awnedness, in contrast, is a trait that has been lost in both cultivated species due to selection on different sets of genes. In a previous report, we revealed that at least three loci regulate awn development in rice; however, the molecular mechanism underlying awnlessness remains unknown. Here we isolate and characterize a previously unidentified EPIDERMAL PATTERNING FACTOR-LIKE (EPFL) family member named REGULATOR OF AWN ELONGATION 2 (RAE2) and identify one of its requisite processing enzymes, SUBTILISIN-LIKE PROTEASE 1 (SLP1). The RAE2 precursor is specifically cleaved by SLP1 in the rice spikelet, where the mature RAE2 peptide subsequently induces awn elongation. Analysis of RAE2 sequence diversity identified a highly variable GC-rich region harboring multiple independent mutations underlying protein-length variation that disrupt the function of the RAE2 protein and condition the awnless phenotype in Asian rice. Cultivated African rice, on the other hand, retained the functional RAE2 allele despite its awnless phenotype. Our findings illuminate the molecular function of RAE2 in awn development and shed light on the independent domestication histories of Asian and African cultivated rice.

  15. Morphology and muscle gene expression in GIFT and Supreme Nile tilapia varieties reared in two cultivation systems.

    Science.gov (United States)

    Lima, E C S; Povh, J A; Otonel, R A A; Leonhardt, J H; Alfieri, A A; Headley, S A; Souza, F P; Poveda-Parra, A R; Furlan-Murari, P J; Lopera-Barrero, N M

    2017-03-16

    Tissue growth in most fishes occurs by muscular hyperplasia and hypertrophy, which are influenced by different regulatory factors, such as myostatin. The current study evaluated the influence of cultivation in hapas and earthen ponds on the diameter of white muscle fibers and on the myostatin (MSTN-1) gene in GIFT and Supreme varieties of tilapia. Fish of both varieties were reared for 204 days and then divided into four developmental stages. White muscle samples, corresponding to 100 fibers per slide, were collected from the middle region of fish of each variety and cultivation system, and were measured and divided into two classes representing hyperplasia and hypertrophy. Samples were subjected to real-time PCR to analyze gene expression. Hyperplasia decreased during the developing stages, coupled with increased hypertrophy. There was a higher rate of hypertrophy in fish raised in earthen ponds when compared to those raised in hapas, during juvenile and developing phases, and greater hypertrophic growth was observed in GIFT specimens when compared to Supreme specimens in earthen ponds. Since increased MSTN-1 gene expression was observed in GIFT specimens during the developing phase in pond cultivations, and in Supreme tilapia in hapas, MSTN-1 expression is related to greater hypertrophy. These results demonstrate the capacity for increased muscle growth in earthen pond cultivation in which the GIFT variety developed best. How the environment affects the growth of different tilapia varieties may be employed to optimize culture management and genetic improvement programs. Further investigations should aim to describe mechanisms affecting muscle growth and development.

  16. Development of the variety for resistance against bacterial leaf-blight in rice with thermal neutrons

    International Nuclear Information System (INIS)

    Nakai, Hirokazu

    1990-01-01

    In search for the development of genes for resistance against bacterial leaf-blight in rice, thermal neutrons generated from the Research Reactor at the Kyoto University have been applied to the breeding. In this paper, the developmental outcome is described, and a potential application of thermal neutrons for breeding the variety of resistance against bacterial leaf-blight in rice is reviewed. When thermal neutrons were delivered to the rice, the ratio of absorbed doses by B-10, which is contained in a small quantity in the plant, was found to be larger than expected. This implies characteristic effects of thermal neutrons on the plant. When boric acid was incorporated into the plant before irradiation, the effect of thermal neutrons per irradiation time was considered to become great. The frequency of mutations for resistance was significantly higher by thermal neutron, as compared with that induced by other mutagens, such as gamma radiation, ethylene-imine, ethyl-methane-sulfonate, and nitroso-methyl-urea. Genetic analysis of mutants for resistance revealed recessive genes and polygenes. Finally, the application of thermal neutrons and other radiations would contribute greatly to a resolution of serious pollution problems in global food and environment. (N.K.)

  17. Robustness and Strategies of Adaptation among Farmer Varieties of African Rice (Oryza glaberrima) and Asian Rice (Oryza sativa) across West Africa

    NARCIS (Netherlands)

    Mokuwa, A.; Nuijten, H.A.C.P.; Okry, F.; Teeken, B.W.E.; Maat, H.; Richards, P.; Struik, P.C.

    2013-01-01

    This study offers evidence of the robustness of farmer rice varieties (Oryza glaberrima and O. sativa) in West Africa. Our experiments in five West African countries showed that farmer varieties were tolerant of sub-optimal conditions, but employed a range of strategies to cope with stress.

  18. KAJIAN INPUT ENERGI PADA BUDIDAYA PADI METODE SYSTEM OF RICE INTENSIFICATION Studies on Energy Input in System of Rice Intensification Method of Rice Cultivation

    Directory of Open Access Journals (Sweden)

    Bambang Purwantana

    2012-05-01

    Full Text Available System of Rice Intensification (SRI is a rice cultivation method that intensively control and manage macro and micro nutrients as well as irrigation. This paper quantifies and compares the energy uses of SRI and conventional rice cultiva- tion systems. The study was conducted at some SRI’s experimental plots in the districts of Sleman, Kulonprogo, and Bantul, the province of Yogyakarta. The calculation of the energy was based on the farmers’ work schedule, the time required for each operation, the number of laborers, machines, tools, fuel, and all materials and inputs used. The result shows that SRI method consumed 35% less energy to conventional rice cultivation. Energy inputs from seed, water, fertilizer and pesticide were significantly reduces. However, there was higher input of human energy due to compost- ing, land preparation and weeding operations. The specific energy of SRI method was 1.96 MJ ha-1 lower than conven- tional method of 4.43 MJ ha-1. In the SRI method, 56.2 % of energy consumed was classified as direct energy and 43.8% was indirect energy. The SRI method used 61.9 % of renewable energy and 38.1 % of non-renewable energy. The working efficiency in composting and weeding operations should be improved in perspective of machine and tools to reduce the use of human energy. ABSTRAK System of Rice Intensification (SRI, merupakan suatu metode budidaya padi secara intensif dengan pengendalian unsur-unsur hara makro dan mikro disertai pengendalian dan pengaturan kebutuhan air. Penelitian ini bertujuan untuk menganalisis penggunaan energi dan mengidentifikasi kemungkinan penghematan energi pada budidaya padi SRI. Pe- nelitian dilakukan di Kabupaten Sleman, Kulonprogo, dan Bantul, Propinsi Daerah Istimewa Yogyakarta. Pengamatan dilakukan pada plot-plot percobaan budidaya padi SRI dengan melakukan audit seluruh input energi selama proses budidaya dan dikomparasikan dengan input energi pada budidaya padi cara konvensional. Hasil

  19. High genetic diversity among and within bitter manioc varieties cultivated in different soil types in Central Amazonia

    Directory of Open Access Journals (Sweden)

    Alessandro Alves-Pereira

    2017-04-01

    Full Text Available Abstract Although manioc is well adapted to nutrient-poor Oxisols of Amazonia, ethnobotanical observations show that bitter manioc is also frequently cultivated in the highly fertile soils of the floodplains and Amazonian dark earths (ADE along the middle Madeira River. Because different sets of varieties are grown in each soil type, and there are agronomic similarities between ADE and floodplain varieties, it was hypothesized that varieties grown in ADE and floodplain were more closely related to each other than either is to varieties grown in Oxisols. We tested this hypothesis evaluating the intra-varietal genetic diversity and the genetic relationships among manioc varieties commonly cultivated in Oxisols, ADE and floodplain soils. Genetic results did not agree with ethnobotanical expectation, since the relationships between varieties were variable and most individuals of varieties with the same vernacular name, but grown in ADE and floodplain, were distinct. Although the same vernacular name could not always be associated with genetic similarities, there is still a great amount of variation among the varieties. Many ecological and genetic processes may explain the high genetic diversity and differentiation found for bitter manioc varieties, but all contribute to the maintenance and amplification of genetic diversity within the manioc in Central Amazonia.

  20. Basic approaches for the handling of illnesses of the cultivation of the rice

    International Nuclear Information System (INIS)

    Tapiero Ortiz, A.L.

    2001-01-01

    Some basic concepts are exposed for the handling of illnesses in the cultivation of the rice, beginning with the illness definition in the plants, integrating the concept in a system plant-pathogen-environment that in turn would have the subsystem it plants, subsystem pathogen and subsystem environmental conditions. It discusses each one of these subsystems and their influence in the development of the infection. The illnesses of the rice are described taken place by the mushrooms Pyricularia oryzae and Rizoctonia solani and the resistance and receptivity to the pathogens on the part of genetic materials, as well as it influences of the environment and indications are given for their handling. The spotted of the grain of the rice like an illness is described caused by a complex of mushrooms, bacteria and nutritional and climatic factors that cause decrease in the yield and they reduce the quality of the grain and the seed. They are related the pathogens organisms causing the illness, the influence of the environment in their development and instructions are given for their handling

  1. Effect of Cold-Water Irrigation on Grain Quality Traits in japonica Rice Varieties from Yunnan Province, China

    Directory of Open Access Journals (Sweden)

    Guo-zhen ZHAO

    2009-09-01

    Full Text Available The response of grain quality traits to cold-water irrigation and its correlation with cold tolerance were studied in 11 japonica rice varieties from Yunnan Province, China. The results indicated that the response of grain quality traits to the cold-water stress varied with rice varieties and grain quality traits. Under the cold-water stress, grain width, chalky rice rate, whiteness, 1000-grain weight, brown rice rate, taste meter value, peak viscosity, trough viscosity, breakdown viscosity and final viscosity significantly decreased, whereas grain length-width ratio, head rice rate, alkali digestion value, protein content and setback viscosity markedly increased. However, the other traits such as grain length, amylose content, milled rice rate, peak viscosity time and pasting temperature were not significantly affected by the cold-water stress. Significant correlations were discovered between phenotypic acceptability and cold response indices of taste meter value, protein content, peak viscosity and breakdown viscosity. Therefore, it would be very important to improve the cold tolerance of Yunnan rice varieties in order to stabilize and improve their eating quality.

  2. Genetic variation for traits associated with domestication identified in a cultivated rice, Nipponbare (Oryza sativa ssp. japonica) x ancestral rice, O. nivara, mapping population

    Science.gov (United States)

    Oryza nivara, the progenitor of cultivated rice, O. sativa, has been the source of novel alleles for resistance to biotic and abiotic stresses, as well as for yield improvement. Many of these alleles were lost during the domestication process. To determine the molecular changes that occurred during ...

  3. To What Extent Do Improved Practices Increase Productivity of Small-Scale Rice Cultivation in A Rain-fed Area? : Evidence from Tanzania

    OpenAIRE

    Yuko Nakano; Yuki Tanaka; Keijiro Otsuka

    2014-01-01

    This paper investigates the impact of training provided by a large-scale private farm on the performance of surrounding small-scale rice farmers in a rain-fed area in Tanzania. We found that the training effectively enhances the adoption of improved rice cultivation practices, paddy yield, and profit of rice cultivation by small-holder farmers. In fact, the trainees achieve paddy yield of 5 tons per hectare on average, which is remarkably high for rain-fed rice cultivation. Our results sugges...

  4. The Interactive Effect of Diversification and Farming Scale on Productivity of Family Farm:Taking Rice Cultivation as An Example

    Science.gov (United States)

    Wei, Zhou

    2017-05-01

    Based on the diversification and cultivation scale, the rice cropping data of rural fixed observation points in 2011 were selected and the effect of diversification degree on rice productivity was analyzed by the Tobit model. The empirical results of the model show that diversification of sample farm will lead to loss of rice production efficiency. With the increase of rice planting scale, the loss of rice production efficiency will need to be further increased by diversification. Thus, we should stick to the family farm of specialized production operation. The transfer of land, the price and quantity of leasing, respecting the law of the market; the raising of funds can be considered non-subsidized capital market financing to help, while maintaining a certain degree of diversification, to avoid idle assets, low resource efficiency loss.

  5. Study of the evolution of nitrogen compounds during grape ripening. application to differentiate grape varieties and cultivated systems.

    Science.gov (United States)

    Garde-Cerdán, Teresa; Lorenzo, Cándida; Lara, José Félix; Pardo, Francisco; Ancín-Azpilicueta, Carmen; Salinas, M Rosario

    2009-03-25

    The aim of this work was to study the evolution of amino acids and ammonium during grape ripening and to evaluate its application to differentiate grape varieties and cultivated systems (organic and nonorganic). For this purpose, Monastrell, Syrah, Merlot, and Petit Verdot grapes produced using conventional agriculture and Monastrell grape cultivated using organic agriculture, collected during two consecutive harvests at different stages of ripening, were studied. These years of harvest were very different climatic years; even so, the grape varieties presented similar qualitative compositions. Therefore, the percentage of amino acids at harvest moment allowed differentiation of grapes according to variety and cultivated system, regardless of the year. The nitrogen composition could allow estimation of the fermentative aroma potential of grapes. Thus, Syrah was the grape with the greatest aroma potential at harvest. Monastrell nonorganic grape had a concentration of nitrogen compounds superior to that of Monastrell organic grape. In Monastrell, Syrah, and Merlot, traditional varieties in the area, the highest concentration of nitrogen compounds coincided with the highest degrees Baume/total acidity ratio and color index during 2007. Consequently, technological and phenolic maturity of these grape varieties coincided with the maximum composition of nitrogen compounds. However, in 2008, this did not happen because grape ripening was irregular as a consequence of different climatological conditions.

  6. The estimation genetically effective call numbers of panicle formation of seratus malam anda cisadane rice varieties

    International Nuclear Information System (INIS)

    Dwimahyani, I.; Suyono, G.

    1988-01-01

    An experiment has been carried out to estimate the genetically effective cell numbers on panicle formation of 2 rice varieties. Seeds of Seratus Malam were irradiated with gamma rays 60-Co with doses 0.2; 0.3; 0.4; 0.5 kGy, while Cisadane obtained doses 0.1; 0.2; 0.3; 0.4; and 0.5 kGy. Seeds then planted as M1 generation. Panicle form this M1 generation were observed and appeared as Albania and Xantha. Form this observation segregation ratio could be determined. It was showed that Cisadane was more sensitive than Seratus Malam variety. The genetically effective Cell Numbers value at low dose was 3 for both varieties. At high dose, the genetically effective cell numbers values was 2 for Seratus Malam and 1 for Cisadane varieties. Result indicate that high dose of irradiation could kill cell and therefore reduce effective cell numbers on panicle formation. (Authors). 6 refs, 3 tabs

  7. Concentration of radiocesium in rice, vegetables, and fruits cultivated in the evacuation area in Okuma Town, Fukushima

    International Nuclear Information System (INIS)

    Kenji Ohse; Kyo Kitayama; Akira Kanno; Chika Suzuki; Kencho Kawatsu; Hirofumi Tsukada

    2015-01-01

    Radiocesium concentration in the crops cultivated in contaminated and decontaminated soils in the evacuation area were measured. The radiocesium concentration in the decontaminated soil decreased approximately one-quarter to that in the contaminated soil. The radiocesium concentration in the rice and vegetables cultivated in the decontaminated soil decreased to one-half to tenth of that in the contaminated soil. Except for eggplant and pumpkin cultivated in the decontaminated field, the radiocesium concentration in crops was higher than the standard limit in foods in Japan. The obtained transfer factors of most crops were within the reported values. (author)

  8. A Study on Land Suitability for Rice Cultivation in Khordha District of Odisha (India) Using Remote Sensing and GIS

    Science.gov (United States)

    Rath, Sudhansu S.; Panda, Jagabandhu; Annadurai, R.; Nanda, Sachikanta

    2018-05-01

    With the global population on the rise, it is important to address the increasing demand for food. According to FAO (Food and Agriculture Organization, United Nations), by 2050, the developing countries must double their food production to meet the growing demand. Proper land utilization can be one of the solutions for this problem. In view of this, the current study focussed on land suitability analysis for Khordha district of Odisha (India) for rice crop. This study estimated that the amount of land suitable for rice cropping was 195,731 ha against the currently cultivated land of 122,183.38 ha. Therefore, there was a possibility of more amount of land that could be available for rice cultivation in Khordha district than the currently cultivated area. In order to perform this exercise, the land use and land cover data from IRS (Indian remote sensing satellite), soil nutrient parameters like pH values and nitrogen, potassium, phosphorous and organic carbon contents were considered. In addition, the climatic parameters such as near surface temperature, rainfall and number of rainy days were taken into account. The unused land identified in Khordha district in this study might be utilized for cultivating rice crop in this region.

  9. Rice cultivation in the farming systems of Sukumaland, Tanzania : a quest for sustainable production under structural adjustment programmes

    NARCIS (Netherlands)

    Meertens, H.C.C.

    1999-01-01

    This thesis investigates options for sustainable rice cultivation and general agricultural development in the Mwanza and Shinyanga regions in northwestern Tanzania, often called Sukumaland due to the predominance of Wasukuma people. Generally Sukumaland has a semi-arid climate; agriculture

  10. A Study on Land Suitability for Rice Cultivation in Khordha District of Odisha (India) Using Remote Sensing and GIS

    Science.gov (United States)

    Rath, Sudhansu S.; Panda, Jagabandhu; Annadurai, R.; Nanda, Sachikanta

    2018-02-01

    With the global population on the rise, it is important to address the increasing demand for food. According to FAO (Food and Agriculture Organization, United Nations), by 2050, the developing countries must double their food production to meet the growing demand. Proper land utilization can be one of the solutions for this problem. In view of this, the current study focussed on land suitability analysis for Khordha district of Odisha (India) for rice crop. This study estimated that the amount of land suitable for rice cropping was 195,731 ha against the currently cultivated land of 122,183.38 ha. Therefore, there was a possibility of more amount of land that could be available for rice cultivation in Khordha district than the currently cultivated area. In order to perform this exercise, the land use and land cover data from IRS (Indian remote sensing satellite), soil nutrient parameters like pH values and nitrogen, potassium, phosphorous and organic carbon contents were considered. In addition, the climatic parameters such as near surface temperature, rainfall and number of rainy days were taken into account. The unused land identified in Khordha district in this study might be utilized for cultivating rice crop in this region.

  11. Study on the breeding of japonical gelatinous rice mutant variety Zhenuo 36 with high yield and good grain quality

    International Nuclear Information System (INIS)

    Bao Genliang; Zhang Xiaoming; Ye Shenghai; Zuo Xiaoxu; Feng Zuocheng; Lu Wenwu; Katsura Toomita; Asako Kobayasi

    2004-01-01

    The dry seeds of F 2 , which came from the crossing of japonical rice Bing 92-124 x japonical gelatinous rice Shaonuoxuan (SNX), was induced by 200 Gy 60 Co γ-irradiation. A japonical gelatinous rice mutant ZH206 with high yield, large grain size and good grain quality was obtained through several generation selections. It was demonstrated that the average yield was 9.4% higher than controls in two regional tests in successive two years. Its grain size was obviously large as compared with its original parents, 1000-grain weight was above 30 g, 4.1 g and 3.6 g higher than Bing 92-124 and SNX, respectively. Gelatinous characteristic of its rice was better than control Xianghu 84 and also much better than SNX. In 2003, the mutant was denominated as 'Zhenuo 36' by Crop Variety Identification Committee of Zhejiang Province. As an excellent japonical gelatinous variety, Zhenuo 36 had both the largest rate of increasing yield and the highest grain weight in Zhejiang provincial regional tests of japonical rice during last 20 years. The successful breeding of the variety showed that irradiation induction is an effective method to simultaneously improve some characteristics in rice. (authors)

  12. Agronomic evaluation of four improved rice varieties in different sowing periods

    Directory of Open Access Journals (Sweden)

    Genry Hernández Carrillo

    2017-04-01

    Full Text Available A study to evaluate the agronomic performance of four rice varieties in different seasons, on flooded soil, using direct plantation, was developed at the Local Station for Grain Research, in the municipality of Vertientes, province of Camaguey, Cuba. A block random design was used in the study, with five replicas, through a bifactorial experiment with four treatments (Prosequisa 4, IA Cuba 31, IACuba 40, and Jucarito 104, as control, the sowing period included January, February, March, April, May, June, July, and August. The parameters evaluated were, cycle (days from germination to harvest, final plant height, fertile panicles per m2, filled grain per panicle, 1000-grain mass (14% humidity, crop yields and industrial quality. The highest yields were accomplished in February and June (pattern variety and Prosequisa 4, with 8.2 t/ha-1, in each month. Concerning industrial yields, the best results were achieved in IACuba 31 (66.4; 66.1; and 63.3% full white grain in February, June and July. The most profitable varieties were Prosequisa 4, Jucarito 104, and IACuba 31, in the different seasons evaluated.

  13. Beneficial effect of compost utilization on reducing greenhouse gas emissions in a rice cultivation system through the overall management chain.

    Science.gov (United States)

    Jeong, Seung Tak; Kim, Gil Won; Hwang, Hyun Young; Kim, Pil Joo; Kim, Sang Yoon

    2018-02-01

    Livestock manure application can stimulate greenhouse gas (GHG) emissions, especially methane (CH 4 ) in rice paddy. The stabilized organic matter (OM) is recommended to suppress CH 4 emission without counting the additional GHG emission during the composting process. To evaluate the effect of compost utilization on the net global warming potential (GWP) of a rice cropping system, the fluxes of GHGs from composting to land application were calculated by a life cycle assessment (LCA) method. The model framework was composed of GHG fluxes from industrial activities and biogenic GHG fluxes from the composting and rice cultivation processes. Fresh manure emitted 30MgCO 2 -eq.ha -1 , 90% and 10% of which were contributed by CH 4 and nitrous oxide (N 2 O) fluxes, respectively, during rice cultivation. Compost utilization decreased net GWP by 25% over that of the fresh manure during the whole process. The composting process increased the GWP of the industrial processes by 35%, but the 60% reduction in CH 4 emissions from the rice paddy mainly influenced the reduction of GWP during the overall process. Therefore, compost application could be a good management strategy to reduce GHG emissions from rice paddy systems. Copyright © 2017 Elsevier B.V. All rights reserved.

  14. AFLP markers for the assessment of genetic diversity in european and North American potato varieties cultivated in Iran

    Directory of Open Access Journals (Sweden)

    Saeed Tarkesh Esfahani

    2009-01-01

    Full Text Available Information about the genetic diversity of potato germplasm in Iran is important for variety identification andto enhance the classification of germplasm collections and exploit them in breeding programs and for the development andintroduction of new varieties. AFLP fingerprinting was applied to a group of cultivated potato varieties to find if there is anygeographical differentiation in potato diversity from Europe and North America. The high level of polymorphism within potatovarieties and the high number of variety-specific bands suggest that AFLPs are powerful markers for diversity analysis inpotato varieties. No region-specific AFLP markers were found (present in varieties from the same origin and absent inothers. The UPGMA dendrogram revealed four distinct clusters corresponding almost to the geographical origin of thevarieties. However, the bootstrap support for branches was rather weak. No clusters clearly distinguished varieties fromEurope and North America. Varieties from the same geographical origins however tended to group together within eachcluster. The mean similarity and the UPGMA dendrogram both suggest that North American varieties have nearly identicalgenetic diversity to European varieties. The results of AMOVA revealed large within-region variations which accounted for94.5% of the total molecular variance. The between-region variation, although accounting for only 5.5% of the total variation,was statistically significant. AFLP technology was successfully used to evaluate diversity between different geographicalgroups of potatoes and is recommended for potato genetic studies.

  15. TECHNICAL ECONOMIC FEASIBILITY OF PADDY RICE FIELDS VARIETY OF APPROACH PTT SPECIFIC LOCATIONS IN PAPUA (Case Jayapura

    Directory of Open Access Journals (Sweden)

    Afrizal Malik

    2013-01-01

    Full Text Available Study aims to determine technical economically feasibility of irrigration rice in village of Sumbe, Namblong District, Jayapura on-farm research involving farmers with an area of 2.50 ha cooperators, July to November 2011. Technology introduced: PTT, 4:1 legowo systems, seed varieties Inpari labeled 1, 2, 4, 6, 7, 9, 10, and Sintanur. Fertilizer: urea 150 kg +100 kg +100 kg SP-36 Phonska KCl +50 kg per ha. Variables: height and number of tillers 35 and 65 dap, weight of 1000 seeds, productivity, input, and output. Data were analyzed descriptively. Highest productivity in varieties Inpari 7 (7.925 tonnes per ha Milled Rice (MR and lowest Sintanur varieties (4.625 tonnes per ha MR. Pest stand: rice leaffolder and stinky rice pest. Lowest expenditure on non-cooperators Ciherang farmers IDR 12.15 million per ha per Growing Season (GS and highest in varieties Inpari 7 (IDR 15,005,000 per ha per GS. Lowest Acceptance Ciherang farmers on non-cooperators, IDR 16.4 million per ha per GS and highest in varieties Inpari 7, IDR 27.7 million per ha per GS. If farmers apply recommendation technologies using Inpari 7 varieties, farmers receiving IDR 3,173,750 per month (greater than Regional Minimum Wage of Jayapura. Need government support in order to minimize dependence on outside

  16. Patterns of nucleotide diversity and phenotypes of two domestication related genes (OsC1 and Wx) in indigenous rice varieties in Northeast India.

    Science.gov (United States)

    Choudhury, Baharul Islam; Khan, Mohammed Latif; Dayanandan, Selvadurai

    2014-06-16

    During the domestication of crops, individual plants with traits desirable for human needs have been selected from their wild progenitors. Consequently, genetic and nucleotide diversity of genes associated with these selected traits in crop plants are expected to be lower than their wild progenitors. In the present study, we surveyed the pattern of nucleotide diversity of two selected trait specific genes, Wx and OsC1, which regulate amylose content and apiculus coloration respectively in cultivated rice varieties. The analyzed samples were collected from a wide geographic area in Northeast (NE) India, and included contrasting phenotypes considered to be associated with selected genes, namely glutinous and nonglutinous grains and colored and colorless apiculus. No statistically significant selection signatures were detected in both Wx and OsC1gene sequences. However, low level of selection that varied across the length of each gene was evident. The glutinous type varieties showed higher levels of nucleotide diversity at the Wx locus (πtot = 0.0053) than nonglutinous type varieties (πtot = 0.0043). The OsC1 gene revealed low levels of selection among the colorless apiculus varieties with lower nucleotide diversity (πtot = 0.0010) than in the colored apiculus varieties (πtot = 0.0023). The results revealed that functional mutations at Wx and OsC1genes considered to be associated with specific phenotypes do not necessarily correspond to the phenotypes in indigenous rice varieties in NE India. This suggests that other than previously reported genomic regions may also be involved in determination of these phenotypes.

  17. Single-base resolution maps of cultivated and wild rice methylomes and regulatory roles of DNA methylation in plant gene expression

    Directory of Open Access Journals (Sweden)

    Li Xin

    2012-07-01

    Full Text Available Abstract Background DNA methylation plays important biological roles in plants and animals. To examine the rice genomic methylation landscape and assess its functional significance, we generated single-base resolution DNA methylome maps for Asian cultivated rice Oryza sativa ssp. japonica, indica and their wild relatives, Oryza rufipogon and Oryza nivara. Results The overall methylation level of rice genomes is four times higher than that of Arabidopsis. Consistent with the results reported for Arabidopsis, methylation in promoters represses gene expression while gene-body methylation generally appears to be positively associated with gene expression. Interestingly, we discovered that methylation in gene transcriptional termination regions (TTRs can significantly repress gene expression, and the effect is even stronger than that of promoter methylation. Through integrated analysis of genomic, DNA methylomic and transcriptomic differences between cultivated and wild rice, we found that primary DNA sequence divergence is the major determinant of methylational differences at the whole genome level, but DNA methylational difference alone can only account for limited gene expression variation between the cultivated and wild rice. Furthermore, we identified a number of genes with significant difference in methylation level between the wild and cultivated rice. Conclusions The single-base resolution methylomes of rice obtained in this study have not only broadened our understanding of the mechanism and function of DNA methylation in plant genomes, but also provided valuable data for future studies of rice epigenetics and the epigenetic differentiation between wild and cultivated rice.

  18. Behavior of Foliares Applications of Humus Mixed with the NPK in Rice Cultivation (Oryza Sativa L..

    Directory of Open Access Journals (Sweden)

    Rolando Saborit Reyes

    2013-12-01

    Full Text Available Taking into consideration the observation of one green yellowsh clorosis in the plantations of rice, after the cold campaings and the disminishing of the agricultural efficiency of the cerial in areas of Saint Elena Land belonging to the fortified cooperatove of credits and service (FCCS Camilo Cienfuegos in Las Nuevas, La Sierpe, Province of Sancti – Spiritus, were done foliars aplications with mineral fertilizing as, N.P.K to different doses and moments of applications, in order to obtain alternative of nutrition for the cultivation, the work was done on a green yellowish ferralitic ground since 2009 to 2011, using LP-5 cultivation doing the sowing by the method of transplantation, fertilization. It was done mixing 49L. ha-¹ of liquid warm humus with 0.35 Kg. ha-¹ of nitrogen, phosphorus and potassium. The results shown that the use of the foliar fertilization with liquid worm humus mixed with the N.P.K minerals, increased the efficiency, obtaining 5.3t. ha-¹ as an average in different variants used. The economic analysis showed that the treatment with 40% of nitrogen was reduced with seven foliars applications, it was highest to the witness N.P.K in 1.5t . ha-¹ of the grain obtaining a relative benefit of 4264.55 pesos by hectarea.

  19. Mutation Breeding and Selection for Phenotypic Mutants in Standard Rice Varieties by Ion Beam

    International Nuclear Information System (INIS)

    Puddhanon, Prawit; Pintanon, Prateep; Chaithep, Waree; Songjuntuke, Ksan

    2009-07-01

    Full text: Effects of 80 keV ion beam (10 16 ion/cm 2 on mutations of RD6 and Sanpatong 1 rice varieties were studied in 2006. In order to obtain the phenotypic mutants, each variety was sown in the laboratory and under field conditions at Maejo University in 2007 dry season. Seed germination noticeably declined. For RD6, only 45.1% germinated in the laboratory, and 18.1% were established under the field condition. Similarly, 62.3% of Sanpatong 1 germinated in the laboratory and 31.4% established in the field. No phenotypic mutants were observed in the first generation (M 1 ). The M2 seeds were harvested separately from 3 panicles of each M plant in RD6 and Sanpatong1, totaling 810 and 1,878 lines, respectively. In 2007 rainy season, they were planted on a panicle to row basis. It was found that more phenotypic mutants were observed in the M 2 for Sanpatong 1 than for RD6. The mutant characters included dwarf plants, early maturity, male sterility and larger panicle sizes. As a result, about 420 within line selections were collected and the M 3 seeds were harvested for further field condition and gene markers evaluations

  20. Application of space mutation on creation of rice new material and breeding of new variety

    International Nuclear Information System (INIS)

    Pu Zhigang; Zhang Zhiyong; Xiang Yuewu; Cai Pingzhong; Zhou Xianming; Zhang Zhixiong

    2008-01-01

    One rice material with quasi-aromatic and special color-glumes has been selected through space mutation. A new cytoplasmic male sterile line was transferred from the special rice material. The abortive fertility of sterility is stable, its restoring and combining ability is well. The rice quality of Huaxiang A reaches the third grade rice high-quality standard. A new high yielding hybrid rice cultivar (Huaxiang 7) was bred from the cytoplasmic male sterile line 'Huaxiang A' and restorer line 'Chuanhui 907', which already passed provincinal evaluation. (authors)

  1. Population Dynamics Among six Major Groups of the Oryza rufipogon Species Complex, Wild Relative of Cultivated Asian Rice.

    Science.gov (United States)

    Kim, HyunJung; Jung, Janelle; Singh, Namrata; Greenberg, Anthony; Doyle, Jeff J; Tyagi, Wricha; Chung, Jong-Wook; Kimball, Jennifer; Hamilton, Ruaraidh Sackville; McCouch, Susan R

    2016-12-01

    Understanding population structure of the wild progenitor of Asian cultivated rice (O. sativa), the Oryza rufipogon species complex (ORSC), is of interest to plant breeders and contributes to our understanding of rice domestication. A collection of 286 diverse ORSC accessions was evaluated for nuclear variation using genotyping-by-sequencing (113,739 SNPs) and for chloroplast variation using Sanger sequencing (25 polymorphic sites). Six wild subpopulations were identified, with 25 % of accessions classified as admixed. Three of the wild groups were genetically and geographically closely related to the O. sativa subpopulations, indica, aus and japonica, and carried O. sativa introgressions; the other three wild groups were genetically divergent, had unique chloroplast haplotypes, and were located at the geographical extremes of the species range. The genetic subpopulations were significantly correlated (r 2  = 0.562) with traditional species designations, O. rufipogon (perennial) and O. nivara (annual), differentiated based on morphology and life history. A wild diversity panel of 95 purified (inbred) accessions was developed for future genetic studies. Our results suggest that the cultivated aus subpopulation is most closely related to an annual wild relative, japonica to a perennial wild relative, and indica to an admixed population of diverse annual and perennial wild ancestors. Gene flow between ORSC and O. sativa is common in regions where rice is cultivated, threatening the identity and diversity of wild ORSC populations. The three geographically isolated ORSC populations harbor variation rarely seen in cultivated rice and provide a unique window into the genetic composition of ancient rice subpopulations.

  2. Glycaemic index values and physicochemical properties of five brown rice varieties cooked by different domestic cooking methods

    Directory of Open Access Journals (Sweden)

    Madan Kumar Chapagai

    2016-08-01

    Full Text Available Background: The prevalence of diabetes has increased dramatically in recent decades in the regions where people excessively consume white rice. Due to higher nutritional values and bioactive components, low to medium glycaemic index (GI brown rice could be a potential alternative to white rice in these regions. Methods: Five varieties, Chiang (CH, Sungyod (SY, Lepnok (LP from Thailand, Long grain specialty 1 (LS 1 and Long grain specialty 2 (LS 2 from Malaysia were tested for GI. Ten test foods were prepared from 5 varieties by 2 cooking techniques (pressure cooker, PC and rice cooker, RC. Overnight fasted 10 healthy subjects were fed with 25 g glucose as a reference food (RF on 3 occasions and amount equivalent to 25 g available carbohydrate portion of test food (TF on 1 occasion in separate days. Fasting and post-prandial capillary blood glucose was measured via finger-prick methods at 0, 15, 30, 45, 60, 90 and 120 min, and the incremental area under curve (iAUC was determined. The GI of each TF was calculated as percentage of incremental area under curve (iAUC of TF over RF. Results: The mean GI values of SY (72 – 81, high, CH and LP (59 – 65, medium and LS 1 and LS 2 (64 – 73, medium to high for cooking were discovered by PC and RC methods. The GI did not vary significantly (p>0.05 among varieties as well as between cooking methods. GI showed a significant negative correlation with the amylose content (r = –0.70, p<0.05 and significant positive correlation with cold peak viscosity (r = 0.80, p<0.01. Conclusions: All five rice varieties irrespectively of the cooking method used are classified as medium to high GI foods. Medium GI varieties could have potential of being used in diabetic diet. Cooking methods did not significantly alter the glycaemic characteristics of the studied varieties. Amylose content and pasting properties can be used for predicting GI of brown rice. It is urgent to explore low GI brown rice varieties in these

  3. Robustness and strategies of adaptation among farmer varieties of African Rice (Oryza glaberrima) and Asian Rice (Oryza sativa) across West Africa.

    Science.gov (United States)

    Mokuwa, Alfred; Nuijten, Edwin; Okry, Florent; Teeken, Béla; Maat, Harro; Richards, Paul; Struik, Paul C

    2013-01-01

    This study offers evidence of the robustness of farmer rice varieties (Oryza glaberrima and O. sativa) in West Africa. Our experiments in five West African countries showed that farmer varieties were tolerant of sub-optimal conditions, but employed a range of strategies to cope with stress. Varieties belonging to the species Oryza glaberrima - solely the product of farmer agency - were the most successful in adapting to a range of adverse conditions. Some of the farmer selections from within the indica and japonica subspecies of O. sativa also performed well in a range of conditions, but other farmer selections from within these two subspecies were mainly limited to more specific niches. The results contradict the rather common belief that farmer varieties are only of local value. Farmer varieties should be considered by breeding programmes and used (alongside improved varieties) in dissemination projects for rural food security.

  4. Robustness and Strategies of Adaptation among Farmer Varieties of African Rice (Oryza glaberrima) and Asian Rice (Oryza sativa) across West Africa

    Science.gov (United States)

    Maat, Harro; Richards, Paul; Struik, Paul C.

    2013-01-01

    This study offers evidence of the robustness of farmer rice varieties (Oryza glaberrima and O. sativa) in West Africa. Our experiments in five West African countries showed that farmer varieties were tolerant of sub-optimal conditions, but employed a range of strategies to cope with stress. Varieties belonging to the species Oryza glaberrima – solely the product of farmer agency – were the most successful in adapting to a range of adverse conditions. Some of the farmer selections from within the indica and japonica subspecies of O. sativa also performed well in a range of conditions, but other farmer selections from within these two subspecies were mainly limited to more specific niches. The results contradict the rather common belief that farmer varieties are only of local value. Farmer varieties should be considered by breeding programmes and used (alongside improved varieties) in dissemination projects for rural food security. PMID:23536754

  5. Radiation effect in another culture rice (Oryza Sativa L.) variety Krispo-38

    International Nuclear Information System (INIS)

    Montepeque, R.; Molina, L.G.; Lopez, J.J.; Pazos, W.; Ramirez, J.

    1993-01-01

    Seeds of the rice variety Krispo-38 were irradiated with 0, 100, 200, 300 and 400 Gray (Gy) and sown in the greenhouse. From each treatment, others containing uninucleate pollen grains were collected and cultured on a N6 agar medium with 5% sucrose concentration and supplemented with mg/l naphthalene acetic acid (NAA), 1 mg/l kinetin and 1 mg/l 2,4 dichlorophenoxyacetic acid (2,4-D). The pollen grains were induced to develop callus. The percentage of others that produced calli varied from 0.8 for the 400-Gy treatment to 3.3% for the control. The calli were transferred to N6 medium with 3% sucrose concentration, supplemented with 0.5 mg/l NAA and 1 mg/l kinetin. The percentage of calli that produced green plants varied from 1.9 for the 300-Gy treatment to 10.5 for the 200 Gy treatment. Plants developed in 2-5 weeks after callus transplant. A total of 101 green plants was obtained

  6. Breeding of a new early season indica rice variety Ganzaoxian 56 by irradiation, anther culture and hybridization

    International Nuclear Information System (INIS)

    Huang Yingjin; Liu Yibai; Kuang Huiyun; Xu Zhengjin

    2005-01-01

    Ganzaoxian 56 is a new early season indica rice variety, which was bred in the College of Agronomy of Jiangxi Agricultural University by the integrative breeding techniques of radiation, anther culture and hybridization. Its main characteristics were as follows: super quality, high yield, high tolerance to heat-forced maturity, suitable maturity and high resistance to rice blast. It was registered by Crop Cultivar Registration Committee of Jiangxi Province on March 19, 2004. The breeding process of Ganzaoxian 56, main characteristics and the value of its exploitation and application were described in this paper. (authors)

  7. Variations in Metal Tolerance and Accumulation in Three Hydroponically Cultivated Varieties of Salix integra Treated with Lead

    Science.gov (United States)

    Sun, Haijing; Chen, Yitai; Pan, Hongwei; Yang, Xiaoe; Rafiq, Tariq

    2014-01-01

    Willow species have been suggested for use in the remediation of contaminated soils due to their high biomass production, fast growth, and high accumulation of heavy metals. The tolerance and accumulation of metals may vary among willow species and varieties, and the assessment of this variability is vital for selecting willow species/varieties for phytoremediation applications. Here, we examined the variations in lead (Pb) tolerance and accumulation of three cultivated varieties of Salix integra (Weishanhu, Yizhibi and Dahongtou), a shrub willow native to northeastern China, using hydroponic culture in a greenhouse. In general, the tolerance and accumulation of Pb varied among the three willow varieties depending on the Pb concentration. All three varieties had a high tolerance index (TI) and EC50 value (the effective concentration of Pb in the nutrient solution that caused a 50% inhibition on biomass production), but a low translocation factor (TF), indicating that Pb sequestration is mainly restricted in the roots of S. integra. Among the three varieties, Dahogntou was more sensitive to the increased Pb concentration than the other two varieties, with the lowest EC50 and TI for root and above-ground tissues. In this respect, Weishanhu and Yizhibi were more suitable for phytostabilization of Pb-contaminated soils. However, our findings also indicated the importance of considering the toxicity symptoms when selecting willow varieties for the use of phytoremediation, since we also found that the three varieties revealed various toxicity symptoms of leaf wilting, chlorosis and inhibition of shoot and root growth under the higher Pb concentrations. Such symptoms could be considered as a supplementary index in screening tests. PMID:25268840

  8. Variations in metal tolerance and accumulation in three hydroponically cultivated varieties of Salix integra treated with lead.

    Directory of Open Access Journals (Sweden)

    Shufeng Wang

    Full Text Available Willow species have been suggested for use in the remediation of contaminated soils due to their high biomass production, fast growth, and high accumulation of heavy metals. The tolerance and accumulation of metals may vary among willow species and varieties, and the assessment of this variability is vital for selecting willow species/varieties for phytoremediation applications. Here, we examined the variations in lead (Pb tolerance and accumulation of three cultivated varieties of Salix integra (Weishanhu, Yizhibi and Dahongtou, a shrub willow native to northeastern China, using hydroponic culture in a greenhouse. In general, the tolerance and accumulation of Pb varied among the three willow varieties depending on the Pb concentration. All three varieties had a high tolerance index (TI and EC50 value (the effective concentration of Pb in the nutrient solution that caused a 50% inhibition on biomass production, but a low translocation factor (TF, indicating that Pb sequestration is mainly restricted in the roots of S. integra. Among the three varieties, Dahogntou was more sensitive to the increased Pb concentration than the other two varieties, with the lowest EC50 and TI for root and above-ground tissues. In this respect, Weishanhu and Yizhibi were more suitable for phytostabilization of Pb-contaminated soils. However, our findings also indicated the importance of considering the toxicity symptoms when selecting willow varieties for the use of phytoremediation, since we also found that the three varieties revealed various toxicity symptoms of leaf wilting, chlorosis and inhibition of shoot and root growth under the higher Pb concentrations. Such symptoms could be considered as a supplementary index in screening tests.

  9. Effect of NaCl-Stress on Metabolism of NO3-, NH4+ and NO2- at Several Rice Varieties

    Directory of Open Access Journals (Sweden)

    M Zulman Harja Utama

    2010-09-01

    Full Text Available This study was conducted to evaluate the effect of NaCl-stress on metabolism of NO3-, NH4+ and NO2- at several rice varieties. The results showed that an addition of NaCl had lesser effect on NaCl-tolerant varieties as compared to NaCl-sensitive in term of reduction in NO3-, NH4+, and NO2- uptake. Rice adaptation ability to NaCl stress occurred through the mechanism of NO3-, NH4+, and N02- metabolism physiology. It was indicated by the difference concentration of NO3-, NH4+ and N02- between the tolerant (Cisadane, moderate (Batang Lembang, Rendah Kuning, and Batang Piaman and sensitive (IR 66 varieties. Concentration of NH4+ and N02- of tolerant rice (Cisadane at NaCl treatment were about 1.16 and 2.6 times higher than that at control, respectively, while concentration of NO3- was only 0.03 times lower than control. In contrast, concentration of NO3-, NH4+, and N02- of sensitive rice (IR 66, were about 0.09, 0.27, and 0.41 times lower than that in control respecting at NaCl treatment, respectively.

  10. Yield-enhancing heterotic QTL transferred from wild species to cultivated rice Oryza sativa L.

    Science.gov (United States)

    Gaikwad, Kiran B; Singh, Naveen; Bhatia, Dharminder; Kaur, Rupinder; Bains, Navtej S; Bharaj, Tajinder S; Singh, Kuldeep

    2014-01-01

    Utilization of "hidden genes" from wild species has emerged as a novel option for enrichment of genetic diversity for productivity traits. In rice we have generated more than 2000 lines having introgression from 'A' genome-donor wild species of rice in the genetic background of popular varieties PR114 and Pusa44 were developed. Out of these, based on agronomic acceptability, 318 lines were used for developing rice hybrids to assess the effect of introgressions in heterozygous state. These introgression lines and their recurrent parents, possessing fertility restoration ability for wild abortive (WA) cytoplasm, were crossed with cytoplasmic male sterile (CMS) line PMS17A to develop hybrids. Hybrids developed from recurrent parents were used as checks to compare the performance of 318 hybrids developed by hybridizing alien introgression lines with PMS17A. Seventeen hybrids expressed a significant increase in yield and its component traits over check hybrids. These 17 hybrids were re-evaluated in large-size replicated plots. Of these, four hybrids, viz., ILH299, ILH326, ILH867 and ILH901, having introgressions from O. rufipogon and two hybrids (ILH921 and ILH951) having introgressions from O. nivara showed significant heterosis over parental introgression line, recurrent parents and check hybrids for grain yield-related traits. Alien introgressions were detected in the lines taken as male parents for developing six superior hybrids, using a set of 100 polymorphic simple sequence repeat (SSR) markers. Percent introgression showed a range of 2.24 from in O. nivara to 7.66 from O. rufipogon. The introgressed regions and their putative association with yield components in hybrids is reported and discussed.

  11. Changes in carbon stability and microbial activity in size fractions of micro-aggregates in a rice soil chronosequence under long term rice cultivation

    Science.gov (United States)

    Pan, Genxing; Liu, Yalong; Wang, Ping; Li, Lianqinfg; Cheng, Kun; Zheng, Jufeng; Zhang, Xuhui; Zheng, Jinwei; Bian, Rongjun; Ding, Yuanjun; Ma, Chong

    2016-04-01

    Recent studies have shown soil carbon sequestration through physical protection of relative labile carbon intra micro-aggregates with formation of large sized macro-aggregates under good management of soil and agricultural systems. While carbon stabilization had been increasingly concerned as ecosystem properties, the mechanisms underspin bioactivity of soil carbon with increased carbon stability has been still poorly understood. In this study, topsoil samples were collected from rice soils derived from salt marsh under different length of rice cultivation up to 700 years from eastern China. Particle size fractions (PSF) of soil aggregates were separated using a low energy dispersion protocol. Carbon fractions in the PSFs were analyzed either with FTIR spectroscopy. Soil microbial community of bacterial, fungal and archaeal were analyzed with molecular fingerprinting using specific gene primers. Soil respiration and carbon gain from amended maize as well as enzyme activities were measured using lab incubation protocols. While the PSFs were dominated by the fine sand (200-20μm) and silt fraction (20-2μm), the mass proportion both of sand (2000-200μm) and clay (soil aggregates (also referred to aggregate stability). Soil organic carbon was found most enriched in coarse sand fraction (40-60g/kg), followed by the clay fraction (20-24.5g/kg), but depleted in the silt fraction (~10g/kg). Phenolic and aromatic carbon as recalcitrant pool were high (33-40% of total SOC) in both coarse sand and clay fractions than in both fine sand and silt fractions (20-29% of total SOC). However, the ratio of LOC/total SOC showed a weak decreasing trend with decreasing size of the aggregate fractions. Total gene content in the size fractions followed a similar trend to that of SOC. Bacterial and archaeal gene abundance was concentrated in both sand and clay fractions but that of fungi in sand fraction, and sharply decreased with the decreasing size of aggregate fraction. Gene abundance

  12. Rice cultivation in the farming systems of Sukumaland, Tanzania : a quest for sustainable production under structural adjustment programmes

    OpenAIRE

    Meertens, H.C.C.

    1999-01-01

    This thesis investigates options for sustainable rice cultivation and general agricultural development in the Mwanza and Shinyanga regions in northwestern Tanzania, often called Sukumaland due to the predominance of Wasukuma people. Generally Sukumaland has a semi-arid climate; agriculture is constrained by unreliable and low rainfall. In the past fifty years the population density has doubled in most parts. This has triggered several changes in farming systems. One important change ...

  13. Single-base resolution maps of cultivated and wild rice methylomes and regulatory roles of DNA methylation in plant gene expression

    DEFF Research Database (Denmark)

    Li, Xin; Zhu, Jingde; Hu, Fengyi

    2012-01-01

    DNA methylation plays important biological roles in plants and animals. To examine the rice genomic methylation landscape and assess its functional significance, we generated single-base resolution DNA methylome maps for Asian cultivated rice Oryza sativa ssp. japonica, indica and their wild rela...

  14. Cultivate in vitro of wheat Anthers (Triticum Aestivum L.) In the ICA-TENZA and PAV -76 varieties

    International Nuclear Information System (INIS)

    Manrique O, Olga L.

    1994-01-01

    The objective of the present work consisted, in determining the cultivation conditions under which it was possible to induce through the technique of the cultivation of anthers, the callus formation and possible regeneration of green plants of wheat (Triticum aestivum L.) in the varieties ICA-Tenza and Pav -76. With the purpose of identifying the but appropriate state of development of the grain of pollen for the inoculation of the anthers, a cytologic study was made in which was correlation among the moriolic parameters of the plant; (inter liguler distances, auricle-knot distances and longitude of the edges) and the state of development of the microspore; Of the parameters, it was recommended to keep in mind the longitude from the edges when harvesting the experimental material. The anthers of both genotypes were inoculated in the means bases Pope 4 and N6, with hormonal levels of ELL (naftalen acetic acid) of 0.0, 0.5 and 1.0 mg/I. the answers of the genotypes were evaluated before the means of basal cultivation, in connection with the induction of tripes and the plants regeneration. Of the two used genotypes, the Pav -76 it presented bigger capacity to induce the formation of tripes, while the ICA-Tenza genotype presented a bigger answer capacity in the regeneration of plants so much green as albino. The results obtained allowed to establish that a relationship exists between the means of cultivation and the capacity of the genotypes to regenerate as much tripes as plants. Due to the drop survival of the regenerated plants, it was not possible to settle down with clarity a relationship of the ploidia level

  15. Genetic Loci Governing Grain Yield and Root Development under Variable Rice Cultivation Conditions

    Directory of Open Access Journals (Sweden)

    Margaret Catolos

    2017-10-01

    Full Text Available Drought is the major abiotic stress to rice grain yield under unpredictable changing climatic scenarios. The widely grown, high yielding but drought susceptible rice varieties need to be improved by unraveling the genomic regions controlling traits enhancing drought tolerance. The present study was conducted with the aim to identify quantitative trait loci (QTLs for grain yield and root development traits under irrigated non-stress and reproductive-stage drought stress in both lowland and upland situations. A mapping population consisting of 480 lines derived from a cross between Dular (drought-tolerant and IR64-21 (drought susceptible was used. QTL analysis revealed three major consistent-effect QTLs for grain yield (qDTY1.1, qDTY1.3, and qDTY8.1 under non-stress and reproductive-stage drought stress conditions, and 2 QTLs for root traits (qRT9.1 for root-growth angle and qRT5.1 for multiple root traits, i.e., seedling-stage root length, root dry weight and crown root number. The genetic locus qDTY1.1 was identified as hotspot for grain yield and yield-related agronomic and root traits. The study identified significant positive correlations among numbers of crown roots and mesocotyl length at the seedling stage and root length and root dry weight at depth at later stages with grain yield and yield-related traits. Under reproductive stage drought stress, the grain yield advantage of the lines with QTLs ranged from 24.1 to 108.9% under upland and 3.0–22.7% under lowland conditions over the lines without QTLs. The lines with QTL combinations qDTY1.3+qDTY8.1 showed the highest mean grain yield advantage followed by lines having qDTY1.1+qDTY8.1 and qDTY1.1+qDTY8.1+qDTY1.3, across upland/lowland reproductive-stage drought stress. The identified QTLs for root traits, mesocotyl length, grain yield and yield-related traits can be immediately deployed in marker-assisted breeding to develop drought tolerant high yielding rice varieties.

  16. Data set from a comprehensive phosphoproteomic analysis of rice variety IRBB5 in response to bacterial blight

    Directory of Open Access Journals (Sweden)

    Yuxuan Hou

    2016-03-01

    Full Text Available Bacterial blight (BB caused by Xanthomonas oryzae pv. oryzae (Xoo has become one of the most devastating diseases for rice, a major food source for over half of the world populations. To investigate the roles of protein phosphorylation in rice bacterial blight resistance, a quantitative phosphoproteomic study was conducted in rice variety IRBB5 at 0 h and 24 h after Xoo infection. 2367 and 2223 phosphosites on 1334 and 1297 representative proteins were identified in 0 h and 24 h after Xoo infection, respectively, out of which 762 proteins were found to be differentially phosphorylated. In associated with the published article “A comprehensive quantitative phosphoproteome analysis of rice in response to bacterial blight” in BMC Plant Biology (Hou et al., 2015 [1], this dataset article provided the detailed information of experimental designing, methods, features as well as the raw data of mass spectrometry (MS identification. The MS proteomics data could be fully accessed from the ProteomeXchange Consortium with the dataset identifier http://www.ebi.ac.uk/pride/archive/projects/PXD002222. Keywords: Rice (Oryza sativa L., Bacterial blight, Phosphoproteome

  17. Technological approaches to the vinification of Dornfelder grape variety cultivated in Romania

    OpenAIRE

    Antoce Arina Oana; Cojocaru George Adrian

    2015-01-01

    In Romania, Dornfelder is a rare grape variety which started to become popular among some wine producers due to the intense colour of its wines. However, it is mostly used in blends and therefore varietal wines of Dornfelder are not found too often. In this paper we present some technological approaches suitable for the production of varietal wines of Dornfelder, some of them novel for the Romanian wine industry. The experimental samples include a classical red wine made by the usual technol-...

  18. Cultivation of different strains of king oyster mushroom (Pleurotus eryngii) on saw dust and rice straw in Bangladesh.

    Science.gov (United States)

    Moonmoon, Mahbuba; Uddin, Md Nazim; Ahmed, Saleh; Shelly, Nasrat Jahan; Khan, Md Asaduzzaman

    2010-10-01

    Pleurotus eryngii is a popular mushroom due to its excellent consistency of cap and stem, culinary qualities and longer shelf life. In Bangladesh, where Pleurotus mushrooms are very popular, P. eryngii may take position among the consumers, but currently this mushroom is not cultivated in large scale there. In this study, 3 strains of P. eryngii such as Pe-1 (native to Bangladesh), Pe-2 (germplasm collected from China) and Pe-3 (germplasm collected from Japan) were cultivated on saw dust and rice straw and their growth and yield parameters were investigated. Pe-1 on saw dust showed the highest biological yield and efficiency (73.5%) than other strains. Also, the mycelium run rate and number of fruiting bodies were higher in Pe-1 than other two strains. The quality of mushroom strains was near about similar. On saw dust, the yield and efficiency were better than those cultivated on rice straw, however, on straw; the mushroom fruiting bodies were larger in size. This study shows the prospects of P. eryngii cultivation in Bangladesh and suggests further study in controlled environment for higher yield and production.

  19. Radiobiological response of fast neutrons on seedling growth of rice varieties with different amylose content

    International Nuclear Information System (INIS)

    Baradjanegara, A.A.; Sugiyanto, T.; Rahayu, S.

    1978-01-01

    Many studies are reported on radiation effects and on factors modifying the biological response of radiation in rice. However, little attention was directed towards studying effects of fast neutrons on seedling growth response of rice as a function of chemical constituents (e.g. amylose content). Experiments were conducted to investigate the dependency of amylose content in 4 rice cultivars on radiosensitivity to fast neutrons. From the results obtained a clear relationship between amylose content and sensitivity to fast neutrons could be shown. (author)

  20. Induced mutation studies with Brachiaria brizantha Stapf. and some indica rice varieties from Ceylon

    Energy Technology Data Exchange (ETDEWEB)

    Ganashan, P [Agricultural Research Station, Maha-Illuppallama, Ceylon (Sri Lanka)

    1970-03-01

    Non-imbibed seeds of Brachiaria brizantha were irradiated with doses of {sup 60}Co gamma rays ranging from 7.5 to 75 kR and fresh stem cuttings containing three nodes were irradiated with doses ranging from 7.5 to 45 kR. Chromosome counts were made using the Carnoy method. There was no germination at 75 kR, and 18% germination at 60 kR with no survival of the seedlings. At the other doses germination and seedling survival decreased from 56% and 100% respectively for the control to 42% and 46% respectively at 45 kR. There were no chlorophyll mutants at 7.5 kR, while a few were observed among seedlings at the higher doses. In the stem cuttings establishment was poor and morphological variations were observed at all doses above 15 kR. A mutant of desirable plant type was obtained from the 45-kR seed treatment with an erect growth habit, reduced pubescence, short internodes, profuse tillering and rapid regrowth compared with the parent. Four indica rice varieties, H-4, H-8, H-7 and Pachchaiperumal 2462/11 (PP 2462/11), were subjected to gamma rays, neutrons and ethyl methane sulphonate (EMS) treatments. The LD{sub 50} level for gamma rays was 50 to 60 kR, for neutrons 1600 R and for EMS 0.4%. Germination and final plant stand in the M{sub 1} generation were affected only slightly by the neutron treatments, but were greatly reduced by EMS, and gamma irradiation above 35 kR. The final plant stand of the variety PP 2462/11 was most reduced by all the mutagens. In the M{sub 2} generation there was segregation for chlorophyll mutants, of the albina, chlorina, xantha, virescens and zebrina types. Other macro-mutations observed were for grain size and shape, plant height, flowering date and sterility. Grass clump types were found occasionally. (author)

  1. Evaluating Non-Aromatic Rice Varieties for Growth and Yield under Different Rates of Soil Applied Boron

    Directory of Open Access Journals (Sweden)

    Javaid Ahmed Shah

    2016-05-01

    Full Text Available Balanced boron (B fertilization has prime importance to obtain maximum paddy yield. The range between B deficiency and toxicity is smaller than most plant nutrients, though B requirement among different crops varies widely. The adequate dose of B for one genotype can either be insufficient or toxic to other. Hence, without knowing the actual requirements of crop varieties, B application can be risky due to the toxicity hazards. A field experiment was undertaken at experimental farm of Nuclear Institute of Agriculture (NIA Tandojam during 2013, to evaluate the B requirement of two non-aromatic rice varieties. The experiment was arranged in split plot design with three repeats. Two rice varieties Sarshar and Shandar were grown in main plots with four rates of B: 0.5, 1.0, 1.5 and 2.0 kg ha-1 and control (0 kg ha-1 in sub plots. Both the varieties responded differently to B rates. Sarshar produced the highest paddy yield (5691 kg ha-1 at a rate of 1.5 kg B ha-1 and was 18% greater than control, Shandar produced the highest yield (6075 kg ha-1 at a rate of 1.0 kg B ha-1and was 5% greater than control. B accumulation in paddy and straw of both varieties increased with the increasing B rates. Both varieties were also significantly (p<0.05 varied in B accumulations. Comparatively, rice variety Sarshar accumulated 9% and 22% more B in straw and paddy than the Shandar. Thus, the B requirement of Sarshar was relatively higher than the Shandar. Shandar can be grown without the additional B application, whereas, Sarshar requires additional B for its maximum harvest in B deficient soils.

  2. Increasing Efficiency of Soil Fertility Map for Rice Cultivation Using Fuzzy Logic, AHP and GIS

    Directory of Open Access Journals (Sweden)

    javad seyedmohammadi

    2017-02-01

    fertility groups for better management of soil and plant nutrition. Weight of soil parameters was0.54, 0.29 and 0.17 for organic carbon, available phosphor and potassium, respectively. Fuzzy map of study area includes five soil fertility groups as: 22.9% very high fertility, 27.7% high fertility, 35.53% medium fertility, 10.48% low fertility and 3.39% very low fertility. Consequently, a separated map for soil fertility prepared to evaluate soil fertility of study area for rice cultivation. Toinvestigatethe efficiency of fuzzy model and AHP in increasing the accuracy of soil fertility map, soil fertility map with Boolean method prepared as well. Boolean map showed 58.88% fertile and 41.12% unfertile.15 soil samples from different soil fertility groups of study area were derived fromcontrol of maps accuracy. 13 renewed samples of 15 and 9 soil samples have matched with fuzzy and Boolean map, respectively. Comparison of parameters mean in fuzzy map fertility groups showed that parameters mean amounts of very high and high fertility groups are higher than optimum level except potassium that is a few lower than optimum level in high fertility group, therefore, addition of fertilizers in these groups could not be useful to increase rice crop production. Phosphorus parameter amount is lower than the critical level in very low, low and medium fertility groups, then in these groups phosphorus fertilizer should be added to the soil toincreaserice production. The amount of potassium parameter is higher than the critical level and lower than optimum limit in very low, low, medium and high fertility groups, then in these groups addition of potassium fertilizer will results in theincrease of production. Organic carbon amount is lower than optimum level in very low and low fertility groups. With regard to the relation between organic carbon andnitrogen and phosphorus, therefore, the addition of organic carbon fertilizer could compensate deficit of nitrogen and phosphorus in these groups

  3. Effect of Intermittent Drying Conditions on Fissuring Percentage and Process Duration of Long and Medium Rough Rice Varieties

    Directory of Open Access Journals (Sweden)

    A. Ghasemi

    2016-02-01

    Full Text Available One of the factors which affect the quality of rice during milling is internal fissures created during and after drying operation. In many industrial countries intermittent drying method is hired to reduce the moisture content of rough rice in order to reduce the drying time and maintain the quality of the final product. A high percentage of rice breakage during milling process, at least in Iran, necessitates performing the intermittent drying process and optimize it for Iranian varieties. In this study, the effect of this method (drying-tempering and continuous drying method (no tempering on fissuring percentage of Hashemi (long grain and Koohsar (medium grain varieties was investigated. The experiments were carried out at constant drying and tempering temperature of 60 °C, drying durations of 20, 40 and 60 min, and tempering durations of 0 (continuous drying, 40, 80, 120, 160, 200, 240 min. The results revealed that the tempering process significantly reduced the drying time and fissured kernels percentage. Moreover, for both varieties it was observed that the rice fissuring decreased significantly by continuing the tempering process until certain durations. Overall, for optimization of intermittent drying process in terms of the considered qualitative parameters, i.e. reducing energy consumption and losses, conducting 160 and 200 min tempering process after 40 min drying was found appropriate for Hashemi and Koohsar varieties, respectively. In addition, according to the higher fissuring for Koohsar (medium grain compared to Hashemi (long grain, it can be concluded that physical properties such as kernel slenderness ratio is effective on its fissuring.

  4. Evaluating Crossbred Red Rice Variants for Postprandial Glucometabolic Responses: A Comparison with Commercial Varieties

    Directory of Open Access Journals (Sweden)

    Chee-Hee Se

    2016-05-01

    Full Text Available Consumption of white rice predisposes some Asian populations to increased risk of type 2 diabetes. We compared the postprandial glucometabolic responses to three newly-developed crossbred red rice variants (UKMRC9, UKMRC10, UKMRC11 against three selected commercial rice types (Thai red, Basmati white, Jasmine white using 50-g carbohydrate equivalents provided to 12 normoglycaemic adults in a crossover design. Venous blood was drawn fasted and postprandially for three hours. Glycaemic (GI and insulin (II indices, incremental areas-under-the-curves for glucose and insulin (IAUCins, indices of insulin sensitivity and secretion, lactate and peptide hormones (motilin, neuropeptide-Y, orexin-A were analyzed. The lowest to highest trends for GI and II were similar i.e., UKMRC9 < Basmati < Thai red < UKMRC10 < UKMRC11 < Jasmine. Postprandial insulinaemia and IAUCins of only UKMRC9 were significantly the lowest compared to Jasmine. Crude protein and fiber content correlated negatively with the GI values of the test rice. Although peptide hormones were not associated with GI and II characteristics of test rice, early and late phases of prandial neuropeptide-Y changes were negatively correlated with postprandial insulinaemia. This study indicated that only UKMRC9 among the new rice crossbreeds could serve as an alternative cereal option to improve diet quality of Asians with its lowest glycaemic and insulinaemic burden.

  5. Antiradical capacity and polyphenol composition of asparagus spears varieties cultivated under different sunlight conditions.

    Science.gov (United States)

    Kulczyński, Bartosz; Kobus-Cisowska, Joanna; Kmiecik, Dominik; Gramza-Michałowska, Anna; Golczak, Dorota; Korczak, Józef

    2016-01-01

    Asparagus officinalis has a high nutritional value. Asparagus is rich in a number of bioactive compounds, mainly flavonoids (quercetin), glutathione, vitamin C, vitamin E, fructans (inulin and fructooligosaccharides) and phytosterols (b-sitosterol). These compounds may play an important role in human health. The purpose of this study was to examine the antioxidant potential and polyphenol composition of white, pale-colored and green asparagus spears of different cultivars. Investigations were conducted on different asparagus spear extracts. The study included three colors of asparagus (white, pale-colored and green) from five different cultivars subjected to the ethanol extraction procedure. Total phenolic content was also determined by the Folin-Ciocalteu method. Polyphenol (phenolic acids and flavonols) composition was estimated using the HPLC method. The antioxidant properties of extracts were examined using DPPH, ABTS and metal ion chelating assays. The highest contents of phenolic and flavonoids were observed in green asparagus from Grolim and the lowest in pale-colored asparagus from Gyjmlin. It was found that both the color of asparagus and the cultivar had a significant effect on the composition of phenolic acid and flavonols. Radical scavenging activity toward DPPH• and ABTS was highest for green asparagus cv. Grolim and Eposs. The greatest number of Fe ions was chelated by samples of green asparagus cv. Grolim and Huchel's Alpha and pale-colored asparagus cv. Huchel's Alpha. It was shown that the antioxidant activity of asparagus spears measured by antiradical and chelating activity test depends on variety and color. The highest activity was found in green asparagus and the lowest was identified in white asparagus extracts. It has also been clarified that changes in flavonol and phenolic acid composition and increases in their diversity depends on growing with sunlight and variety. Asparagus can provide a valuable source of phenolic compounds in the

  6. Intra lines uniformity and inter lines variation of rice mutants resulting from irradiation of South Kalimantan local varieties

    International Nuclear Information System (INIS)

    Raihani Wahdah; Gusti Rumayadi; Rahmi Zulhidiani

    2016-01-01

    The preference of farmer in tidal swamp on local rice varieties are quite high, but local varieties have a long life and low yield characters, so it needs to be improved for the trait. This study is part of activities of the local rice varieties improvement to generate promising lines were short-moderate aged, but the slimming and pera (high amylose content) grains maintained. The aims of this study were to determine the intra lines uniformity and the inter lines variation of M5 generation of rice mutant lines. The experiment was carried out in the Experimental Station of Agriculture Faculty, Lambung Mangkurat University from March to September 2014. The experiment used 150 earliest flowering lines of 300 M5 mutant lines that were planted. Intra lines uniformity were analysed by comparing the variance of each mutant lines with variance of its parent, while the variation among lines were analyzed by comparing the variance of all lines with variance of its parent. More than 85 % M5 mutant lines from Siam Harli as parent and > 79 % of Siam Kuatek as parent are uniform. The uniform character at all M5 mutant lines, both of Siam Harli or Siam Kuatek parent are the harvest age, the filled grains number, and the empty grains number. There is no variability between M5 mutant lines, but some of M5 mutant lines from Siam Harli and Siam Kuatek have some better characters than their parents, so there is an opportunity for selection. (author)

  7. Differences in Induced Volatile Emissions among Rice Varieties Result in Differential Attraction and Parasitism of Nilaparvata lugens Eggs by the Parasitoid Anagrus nilaparvatae in the Field

    OpenAIRE

    Lou , Yong-Gen; Hua, Xiaoyan; Turlings, Ted C. J.; Cheng, Jiaan; Chen, Xuexin; Ye, Gongyin

    2007-01-01

    We compared the volatiles of JA-treated plants of six rice varieties and then determined, in the laboratory and field, if they differed in attractiveness to Anagrus nilaparavate Pand et Wang, an egg parasitoid of rice planthoppers. Analyses of volatiles revealed significant differences among varieties, both in total quantity and quality of the blends emitted. On the basis of these differences, the six varieties could be roughly divided into three groups. In a Y-tube olfactometer, female wasps...

  8. Microbial activity promoted with organic carbon accumulation in macroaggregates of paddy soils under long-term rice cultivation

    Science.gov (United States)

    Liu, Yalong; Wang, Ping; Ding, Yuanjun; Lu, Haifei; Li, Lianqing; Cheng, Kun; Zheng, Jufeng; Filley, Timothy; Zhang, Xuhui; Zheng, Jinwei; Pan, Genxing

    2016-12-01

    While soil organic carbon (SOC) accumulation and stabilization has been increasingly the focus of ecosystem properties, how it could be linked to soil biological activity enhancement has been poorly assessed. In this study, topsoil samples were collected from a series of rice soils shifted from salt marshes for 0, 50, 100, 300 and 700 years from a coastal area of eastern China. Soil aggregates were fractioned into different sizes of coarse sand (200-2000 µm), fine sand (20-200 µm), silt (2-20 µm) and clay (Soil properties were determined to investigate niche specialization of different soil particle fractions in response to long-term rice cultivation, including recalcitrant and labile organic carbon, microbial diversity of bacterial, archaeal and fungal communities, soil respiration and enzyme activity. The results showed that the mass proportion both of coarse-sand (2000-200 µm) and clay (clay fractions (20-25 g kg-1), but was depleted in silt fractions (˜ 10 g kg-1). The recalcitrant carbon pool was higher (33-40 % of SOC) in both coarse-sand and clay fractions than in fine-sand and silt fractions (20-29 % of SOC). However, the ratio of labile organic carbon (LOC) to SOC showed a weakly decreasing trend with decreasing size of aggregate fractions. Total soil DNA (deoxyribonucleic acid) content in the size fractions followed a similar trend to that of SOC. Despite the largely similar diversity between the fractions, 16S ribosomal gene abundance of bacteria and of archaeal were concentrated in both coarse-sand and clay fractions. Being the highest generally in coarse-sand fractions, 18S rRNA gene abundance of fungi decreased sharply but the diversity gently, with decreasing size of the aggregate fractions. The soil respiration quotient (ratio of respired CO2-C to SOC) was the highest in the silt fraction, followed by the fine-sand fraction, but the lowest in coarse-sand and clay fractions in the rice soils cultivated over 100 years, whereas the microbial

  9. Genetic analysis of rice blast disease resistance genes using USDA rice mini-core and a mapping population

    Science.gov (United States)

    Rice blast disease caused by the fungal pathogen Magnaporthe oryzae (M. oryzae) is one of the most destructive diseases of cultivated rice, resulting in significant yield loss each year all over the world. Developing and utilizing blast resistant rice varieties is the most economical and effective m...

  10. Comparative Analysis of γ-Oryzanol, β-Glucan, Total Phenolic Content and Antioxidant Activity in Fermented Rice Bran of Different Varieties.

    Science.gov (United States)

    Jung, Tae-Dong; Shin, Gi-Hae; Kim, Jae-Min; Choi, Sun-Il; Lee, Jin-Ha; Lee, Sang Jong; Park, Seon Ju; Woo, Koan Sik; Oh, Sea Kwan; Lee, Ok-Hawn

    2017-06-03

    Rice bran, a by-product derived from processing rice, is a rich source of bioactive compounds. Recent studies have suggested that the fermentation can improve their biological activities. This study aimed to determined the level of γ-oryzanol, β-glucan and total phenol contents of fermented rice bran from 21 Korean varieties, as well as to evaluate their antioxidant activities. We also assessed the validation of the analytical method for determining γ-oryzanol content in fermented rice brans. Among the fermented rice brans, the Haedam rice bran contained the highest level of total phenol content (156.08 mg gallic acid equivalents/g), DPPH (2,2-diphenyl-1-picrylhydrazyl) radical scavenging activity (71.30%) and ORAC (Oxygen radical absorbance capacity) value (1101.31 μM trolox equivalents/g). Furthermore, the fermented Migwang rice bran showed the highest level of γ-oryzanol content (294.77 ± 6.74 mg/100 g).

  11. Evolvement of transgenic male-sterility and fertility-restoration system in rice for production of hybrid varieties.

    Science.gov (United States)

    Rao, Gundra Sivakrishna; Deveshwar, Priyanka; Sharma, Malini; Kapoor, Sanjay; Rao, Khareedu Venkateswara

    2018-01-01

    We have developed a unique male-sterility and fertility-restoration system in rice by combining Brassica napus cysteine-protease gene (BnCysP1) with anther-specific P12 promoter of rice for facilitating production of hybrid varieties. In diverse crop plants, male-sterility has been exploited as a useful approach for production of hybrid varieties to harness the benefits of hybrid vigour. The promoter region of Os12bglu38 gene of rice has been isolated from the developing panicles and was designated as P12. The promoter was fused with gusA reporter gene and was expressed in Arabidopsis and rice systems. Transgenic plants exhibited GUS activity in tapetal cells and pollen of the developing anthers indicating anther/pollen-specific expression of the promoter. For engineering nuclear male sterility, the coding region of Brassica napus cysteine protease1 (BnCysP1) was isolated from developing seeds and fused to P12 promoter. Transgenic rice plants obtained with P12-BnCysP1 failed to produce functional pollen grains. The F 1 seeds obtained from BnCysP1 male-sterile plants and untransformed controls showed 1:1 (tolerant:sensitive) ratio when germinated on the MS medium supplemented with phosphinothricin (5 mg/l), confirming that the male sterility has been successfully engineered in rice. For male fertility restoration, transgenic rice plants carrying BnCysP1Si silencing system were developed. The pollination of BnCysP1 male-sterile (female-fertile) plants with BnCysP1Si pollen resulted in normal grain filling. The F 1 seeds of BnCysP1 × BnCysP1Si when germinated on the MS basal medium containing PPT (5 mg/l) and hygromycin (70 mg/l) exhibited 1:1 (tolerant:sensitive) ratio and the tolerant plants invariably showed normal grain filling. The overall results clearly suggest that the customized male-sterility & fertility-restoration system can be exploited for quality hybrid seed production in various crops.

  12. Technological approaches to the vinification of Dornfelder grape variety cultivated in Romania

    Directory of Open Access Journals (Sweden)

    Antoce Arina Oana

    2015-01-01

    Full Text Available In Romania, Dornfelder is a rare grape variety which started to become popular among some wine producers due to the intense colour of its wines. However, it is mostly used in blends and therefore varietal wines of Dornfelder are not found too often. In this paper we present some technological approaches suitable for the production of varietal wines of Dornfelder, some of them novel for the Romanian wine industry. The experimental samples include a classical red wine made by the usual technol- ogy using freshly harvested grapes (DW = Dornfelder wine and two variants made with dried grapes (DR and DWDR. The DR variant (Dornfelder raisin wine is produced by a straw-wine type technology, by fermenting a must obtained from grapes dried for 7 weeks. The DWDR is a variant obtained by fermenting a mixture of crushed dried grapes and new Dornfelder wine, the ratio of crushed raisins to wine being 1:1 in weight. The wines were analysed both physico-chemically and sensorially. After one year of aging in bottles, the variant DWDR of wine, produced by fermenting dried berries in already finished wine, proved to be the most balanced in taste, with an intense and complex aroma of berries and red fruit, also displaying good aging potential and stability. The variant DR appeared dense and intense, but with a less complex fruity aroma, with a dominant note of blueberries and black currants. Both straw wines are preferable to the classic varietal wine, which is vinous, but lacks structure and displays a dissociated acidity and a simple aromatic profile, with dominant sour cherry, mineral and vegetal notes.

  13. Studies on physico-chemical and cooking characteristics of rice bean varieties grown in NE region of India.

    Science.gov (United States)

    Bepary, Rejaul Hoque; Wadikar, D D; Neog, Seuji Borah; Patki, P E

    2017-03-01

    Rice bean ( Vigna umbellata ) is grown in South and Southeast Asia, and the bean has gained importance due to its nutritional strength in terms of dietary fiber, quality protein and minerals. In current study, the nutritional and functional components, cooking and thermo-gravimetric properties of eleven rice bean varieties from NE India were investigated. Results revealed that the major nutrients among the varieties ranged as follows: 54.21-60.49% carbohydrates, 15.64-21.60% protein, 1.22-2.3% fat, 5.53-6.56% crude fibre, 3.34-3.8% ash; while the functional, anti-nutritional factors and mineral were present as 1189.32-1645.8 mg gallic acid equivalent (GAE)/100 g polyphenols, 205.38-432.14 mg/100 g phytic acid, 23.14-34.12 mg/100 g oxalate, 690.7-1589.5 mg/100 g saponins, 49.90-158.17 μg/100 g hydrocyanide, 111.51-168 calcium, 5.50-10.44 zinc, 3.72-8.37 iron. Principal component analysis revealed that varieties with higher calcium, iron and ash content had lower cooking time, swelling ratio, and cooked grain hardness. It is also revealed that varieties with higher weight loss at sixth stage in thermogravimetric graph had lower carbohydrate and higher protein content. Nagadal variety had higher fat, potassium, magnesium, calcium, sodium, iron, copper and chromium content and better cooking quality as compared to the other varieties. The study revealed that Nagadal variety was superior to other varieties with respect to mineral content, cooking and thermal properties and hence have better potential in the development of value added products.

  14. Chloroplast DNA polymorphism and evolutional relationships between Asian cultivated rice (Oryza sativa) and its wild relatives (O. rufipogon).

    Science.gov (United States)

    Li, W J; Zhang, B; Huang, G W; Kang, G P; Liang, M Z; Chen, L B

    2012-12-17

    We analyzed chloroplast DNA (cpDNA) polymorphism and phylogenic relationships between 6 typical indica rice, 4 japonica rice, 8 javanica rice, and 12 Asian common wild rice (Oryza rufipogon) strains collected from different latitudes in China by comparing polymorphism at 9 highly variable regions. One hundred and forty-four polymorphic bases were detected. The O. rufipogon samples had 117 polymorphic bases, showing rich genetic diversity. One hundred and thirty-one bases at 13 sites were identified with indica/japonica characteristics; they showed differences between the indica and japonica subspecies at these sites. The javanica strains and japonica shared similar bases at these 131 polymorphic sites, suggesting that javanica is closely related to japonica. On the basis of length analyses of the open reading frame (ORF)100 and (ORF)29-tRNA-Cys(GCA) (TrnC(GCA)) fragments, the O. rufipogon strains were classified into indica/japonica subgroups, which was consistent with the results of the phylogenic tree assay based on concatenated datasets. These results indicated that differences in indica and japonica also exist in the cpDNA genome of the O. rufipogon strains. However, these differences demonstrated a certain degree of primitiveness and incompleteness, as an O. rufipogon line may show different indica/ japonica attributes at different sites. Consequently, O. rufipogon cannot be simply classified into the indica/japonica types as O. sativa. Our data support the hypothesis that Asian cultivated rice, O. indica and O. japonica, separately evolved from Asian common wild rice (O. rufipogon) strains, which have different indica-japonica differentiation trends.

  15. Effects of nitrogen on egg-laying inhibition and ovicidal response in planthopper-resistant rice varieties.

    Science.gov (United States)

    Horgan, Finbarr G; Srinivasan, Thanga Suja; Naik, Bhaskar S; Ramal, Angelee Fame; Bernal, Carmencita C; Almazan, Maria Liberty P

    2016-11-01

    A series of experiments was set up to examine the effects of nitrogen on rice ( Oryza sativa L.) resistance against Nilaparvata lugens (Stål) and Sogatella furcifera (Horváth). Egg laying by N. lugens was reduced on the indica variety IR60. Nymph biomass ( N. lugens and S. furcifera ) was also lower on IR60: this was associated with low honeydew production and a high proportion of xylem-derived honeydew in N. lugens but not in S. furcifera . Nitrogen increased egg-laying by S. furcifera and increased N. lugens nymph biomass on all varieties tested. Oviposition and egg mortality in both planthopper species were examined on plants at 15, 30 and 45 days after sowing (DAS). Sogatella furcifera laid more eggs on plants at 15 DAS, but laid few eggs during darkness; N. lugens continued to lay eggs on older rice plants (30 DAS) and during darkness. Egg mortality was high on cv. Asiminori, highest at 45 DAS, and higher for S. furcifera than for N. lugens . Mortality of S. furcifera eggs was associated with lesions around the egg clusters. These were more common around clusters laid during the day and suggested induction by Asiminori of an ovicidal response. Egg mortality declined under higher soil nitrogen levels. Results are discussed in the light of improving rice resistance against planthoppers and reducing rates of planthopper adaptation to resistance genes.

  16. PRELIMINARY STUDIES FOR PRODUCING CRUDE LIPASE FROM TEMPE’S MOULD CULTIVATED IN RICE-HUSK-BASED SOLID MEDIA

    Directory of Open Access Journals (Sweden)

    Teuku Beuna Bardant

    2010-06-01

    Full Text Available The goal of these preliminary studies is to support Indonesian program for increasing palm oil added value through independent production technology based on Indonesian natural resources. Various palm oil derivatives could be synthesized enzymatically using lipase from microbes that available in Indonesia. Tempe's mould is available in abundance in Indonesia and had already been proved for producing lipase. This paper provides information about producing crude lipase from Tempe's mould cultivated in rice-husk-based solid media using palm oil as carbon source. Observed variables include solid media composition, optimum fermentation time, extraction and enriching process of crude lipase. The crude lipase was analyzed its hydrolysis activity on coconut oil and palm oil. The result of these preliminary studies shows that this production process is a simple and tough process and very potential to be developed.   Keywords: lipase, Tempe's mould, palm oil, solid fermentation, rice husk

  17. Comparison of SSR and SNP markers in estimation of genetic diversity and population structure of Indian rice varieties.

    Directory of Open Access Journals (Sweden)

    Nivedita Singh

    Full Text Available Simple sequence repeat (SSR and Single Nucleotide Polymorphic (SNP, the two most robust markers for identifying rice varieties were compared for assessment of genetic diversity and population structure. Total 375 varieties of rice from various regions of India archived at the Indian National GeneBank, NBPGR, New Delhi, were analyzed using thirty six genetic markers, each of hypervariable SSR (HvSSR and SNP which were distributed across 12 rice chromosomes. A total of 80 alleles were amplified with the SSR markers with an average of 2.22 alleles per locus whereas, 72 alleles were amplified with SNP markers. Polymorphic information content (PIC values for HvSSR ranged from 0.04 to 0.5 with an average of 0.25. In the case of SNP markers, PIC values ranged from 0.03 to 0.37 with an average of 0.23. Genetic relatedness among the varieties was studied; utilizing an unrooted tree all the genotypes were grouped into three major clusters with both SSR and SNP markers. Analysis of molecular variance (AMOVA indicated that maximum diversity was partitioned between and within individual level but not between populations. Principal coordinate analysis (PCoA with SSR markers showed that genotypes were uniformly distributed across the two axes with 13.33% of cumulative variation whereas, in case of SNP markers varieties were grouped into three broad groups across two axes with 45.20% of cumulative variation. Population structure were tested using K values from 1 to 20, but there was no clear population structure, therefore Ln(PD derived Δk was plotted against the K to determine the number of populations. In case of SSR maximum Δk was at K=5 whereas, in case of SNP maximum Δk was found at K=15, suggesting that resolution of population was higher with SNP markers, but SSR were more efficient for diversity analysis.

  18. Comparison of SSR and SNP markers in estimation of genetic diversity and population structure of Indian rice varieties.

    Science.gov (United States)

    Singh, Nivedita; Choudhury, Debjani Roy; Singh, Amit Kumar; Kumar, Sundeep; Srinivasan, Kalyani; Tyagi, R K; Singh, N K; Singh, Rakesh

    2013-01-01

    Simple sequence repeat (SSR) and Single Nucleotide Polymorphic (SNP), the two most robust markers for identifying rice varieties were compared for assessment of genetic diversity and population structure. Total 375 varieties of rice from various regions of India archived at the Indian National GeneBank, NBPGR, New Delhi, were analyzed using thirty six genetic markers, each of hypervariable SSR (HvSSR) and SNP which were distributed across 12 rice chromosomes. A total of 80 alleles were amplified with the SSR markers with an average of 2.22 alleles per locus whereas, 72 alleles were amplified with SNP markers. Polymorphic information content (PIC) values for HvSSR ranged from 0.04 to 0.5 with an average of 0.25. In the case of SNP markers, PIC values ranged from 0.03 to 0.37 with an average of 0.23. Genetic relatedness among the varieties was studied; utilizing an unrooted tree all the genotypes were grouped into three major clusters with both SSR and SNP markers. Analysis of molecular variance (AMOVA) indicated that maximum diversity was partitioned between and within individual level but not between populations. Principal coordinate analysis (PCoA) with SSR markers showed that genotypes were uniformly distributed across the two axes with 13.33% of cumulative variation whereas, in case of SNP markers varieties were grouped into three broad groups across two axes with 45.20% of cumulative variation. Population structure were tested using K values from 1 to 20, but there was no clear population structure, therefore Ln(PD) derived Δk was plotted against the K to determine the number of populations. In case of SSR maximum Δk was at K=5 whereas, in case of SNP maximum Δk was found at K=15, suggesting that resolution of population was higher with SNP markers, but SSR were more efficient for diversity analysis.

  19. Additional file 2: Figure S3. of Interactions between the oomycete Pythium arrhenomanes and the rice root-knot nematode Meloidogyne graminicola in aerobic Asian rice varieties

    OpenAIRE

    Verbeek, R.; Banaay, C.; Sikder, M.; De Waele, D.; Vera Cruz, C.; Gheysen, G.; Höfte, M.; Kyndt, Tina

    2016-01-01

    Pythium arrhenomanes DNA in rice roots expressed as picogram Pythium DNA per nanogram total DNA. Varieties Palawan (A) and IR81413-BB-75-4 (B) quantified with P. arrhenomanes specific and plant specific primers at 2, 10, 20, 45 and 60 days after transplanting in the raised bed experiment. ‘Natural infestation’ = soil taken from field B912 and ‘Natural infestation + P. arrhenomanes’ = B912 soil with additional P. arrhenomanes inoculation. Each treatment has two biological replicates (of three ...

  20. The biosynthesis, structure and gelatinization properties of starches from wild and cultivated African rice species (Oryza barthii and Oryza glaberrima).

    Science.gov (United States)

    Wang, Kai; Wambugu, Peterson W; Zhang, Bin; Wu, Alex Chi; Henry, Robert J; Gilbert, Robert G

    2015-09-20

    The molecular structure and gelatinization properties of starches from domesticated African rice (Oryza glaberrima) and its wild progenitor (Oryza barthii) are determined and comparison made with Asian domesticated rice (Oryza sativa), the commonest commercial rice. This suggests possible enzymatic processes contributing to the unique traits of the African varieties. These have similar starch structures, including smaller amylose molecules, but larger amounts of amylose chains across the whole amylose chain-length distribution, and higher amylose contents, than O. sativa. They also show a higher proportion of two- and three-lamellae spanning amylopectin branch chains (degree of polymerization 34-100) than O. sativa, which contributes to their higher gelatinization temperatures. Fitting amylopectin chain-length distribution with a biosynthesis-based mathematical model suggests that the reason for this difference might be because O. glaberrima and O. barthii have more active SSIIIa and/or less active SBEIIb enzymes. Copyright © 2015 Elsevier Ltd. All rights reserved.

  1. Analysis of Stress-Responsive Gene Expression in Cultivated and Weedy Rice Differing in Cold Stress Tolerance.

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    Caroline Borges Bevilacqua

    Full Text Available Rice (Oryza sativa L. cultivars show impairment of growth in response to environmental stresses such as cold at the early seedling stage. Locally adapted weedy rice is able to survive under adverse environmental conditions, and can emerge in fields from greater soil depth. Cold-tolerant weedy rice can be a good genetic source for developing cold-tolerant, weed-competitive rice cultivars. An in-depth analysis is presented here of diverse indica and japonica rice genotypes, mostly weedy rice, for cold stress response to provide an understanding of different stress adaptive mechanisms towards improvement of the rice crop performance in the field. We have tested a collection of weedy rice genotypes to: 1 classify the subspecies (ssp. grouping (japonica or indica of 21 accessions; 2 evaluate their sensitivity to cold stress; and 3 analyze the expression of stress-responsive genes under cold stress and a combination of cold and depth stress. Seeds were germinated at 25°C at 1.5- and 10-cm sowing depth for 10d. Seedlings were then exposed to cold stress at 10°C for 6, 24 and 96h, and the expression of cold-, anoxia-, and submergence-inducible genes was analyzed. Control plants were seeded at 1.5cm depth and kept at 25°C. The analysis revealed that cold stress signaling in indica genotypes is more complex than that of japonica as it operates via both the CBF-dependent and CBF-independent pathways, implicated through induction of transcription factors including OsNAC2, OsMYB46 and OsF-BOX28. When plants were exposed to cold + sowing depth stress, a complex signaling network was induced that involved cross talk between stresses mediated by CBF-dependent and CBF-independent pathways to circumvent the detrimental effects of stresses. The experiments revealed the importance of the CBF regulon for tolerance to both stresses in japonica and indica ssp. The mechanisms for cold tolerance differed among weedy indica genotypes and also between weedy indica and

  2. The variety mixture strategy assessed in a G × G experiment with rice and the blast fungus Magnaporthe oryzae.

    Science.gov (United States)

    Gallet, Romain; Bonnot, François; Milazzo, Joëlle; Tertois, Christophe; Adreit, Henri; Ravigné, Virginie; Tharreau, Didier; Fournier, Elisabeth

    2013-01-01

    Frequent and devastating epidemics of parasites are one of the major issues encountered by modern agriculture. To manage the impact of pathogens, resistant plant varieties have been selected. However, resistances are overcome by parasites requiring the use of pesticides and causing new economical and food safety issues. A promising strategy to maintain the epidemic at a low level and hamper pathogen's adaptation to varietal resistance is the use of mixtures of varieties such that the mix will form a heterogeneous environment for the parasite. A way to find the good combination of varieties that will actually constitute a heterogeneous environment for pathogens is to look for genotype × genotype (G × G) interactions between pathogens and plant varieties. A pattern in which pathogens have a high fitness on one variety and a poor fitness on other varieties guarantees the efficiency of the mixture strategy. In the present article, we inoculated 18 different genotypes of the fungus Magnaporthe oryzae on three rice plant varieties showing different levels of partial resistance in order to find a variety combination compatible with the requirements of the variety mixture strategy, i.e., showing appropriate G × G interactions. We estimated the success of each plant-fungus interaction by measuring fungal fitness and three fungal life history traits: infection success, within-host growth, sporulation capacity. Our results show the existence of G × G interactions between the two varieties Ariete and CO39 on all measured traits and fungal fitness. We also observed that these varieties have different resistance mechanisms; Ariete is good at controlling infection success of the parasite but is not able to control its growth when inside the leaf, while CO39 shows the opposite pattern. We also found that Maratelli's resistance has been eroded. Finally, correlation analyses demonstrated that not all infectious traits are positively correlated.

  3. The variety mixture strategy assessed in a GXG experiment with rice and the blast fungus Magnaporthe oryzae

    Directory of Open Access Journals (Sweden)

    Romain eGallet

    2014-01-01

    Full Text Available Frequent and devastating epidemics of parasites are one of the major issues encountered by modern agriculture. To manage the impact of pathogens, resistant plant varieties have been selected. However, resistances are overcome by parasites requiring the use of pesticides and causing new economical and food safety issues. A promising strategy to maintain the epidemic at a low level and hamper pathogen’s adaptation to varietal resistance is the use of mixtures of varieties such that the mix will form a heterogeneous environment for the parasite. A way to find the good combination of varieties that will actually constitute a heterogeneous environment for pathogens is to look for genotype x genotype (GxG interactions between pathogens and plant varieties. A pattern in which pathogens have a high fitness on one variety and a poor fitness on other varieties guarantees the efficiency of the mixture strategy.In the present article, we inoculated 18 different genotypes of the fungus Magnaporthe oryzae on three rice plant varieties showing different levels of partial resistance in order to find a variety combination compatible with the requirements of the variety mixture strategy, i.e. showing appropriate GxG interactions. We estimated the success of each plant-fungus interaction by measuring fungal fitness and three fungal life history traits: infection success, within-host growth, sporulation capacity. Our results show the existence of GxG interactions between the two varieties Ariete and CO39 on all measured traits and fungal fitness. We also observed that these varieties have different resistance mechanisms; Ariete is good at controlling infection success of the parasite but is not able to control its growth when inside the leaf, while CO39 show the opposite pattern. We also found that Maratelli’s resistance has been eroded. Finally, correlation analyses demonstrated that not all infectious traits are positively correlated.

  4. Suitability assessment and mapping of Oyo State, Nigeria, for rice cultivation using GIS

    Science.gov (United States)

    Ayoade, Modupe Alake

    2017-08-01

    Rice is one of the most preferred food crops in Nigeria. However, local rice production has declined with the oil boom of the 1970s causing demand to outstrip supply. Rice production can be increased through the integration of Geographic Information Systems (GIS) and crop-land suitability analysis and mapping. Based on the key predictor variables that determine rice yield mentioned in relevant literature, data on rainfall, temperature, relative humidity, slope, and soil of Oyo state were obtained. To develop rice suitability maps for the state, two MCE-GIS techniques, namely the Overlay approach and weighted linear combination (WLC), using fuzzy AHP were used and compared. A Boolean land use map derived from a landsat imagery was used in masking out areas currently unavailable for rice production. Both suitability maps were classified into four categories of very suitable, suitable, moderate, and fairly moderate. Although the maps differ slightly, the overlay and WLC (AHP) approach found most parts of Oyo state (51.79 and 82.9 % respectively) to be moderately suitable for rice production. However, in areas like Eruwa, Oyo, and Shaki, rainfall amount received needs to be supplemented by irrigation for increased rice yield.

  5. Prevalence, isolation and characterization of Bacillus cereus strains from rice of local cultivators of Sabah, Sarawak, and Peninsular Malaysia

    Science.gov (United States)

    Sawei, Jelin; Sani, Norrakiah Abdullah

    2016-11-01

    Bacillus cereus is a spore-forming, facultative anaerobic, motile microorganism that has been identified as a causative agent of two types of gastrointestinal diseases such as emetic and diarrhea. This foodborne pathogen is found in both vegetative cells and endospores form in foods such as rice either raw or cooked. The aim of this study is to investigate and determine the prevalence, characterize and identify the isolation of vegetative cells and endospores of B. cereus in thirty varieties (n=3) of raw rice from Sabah, Sarawak and Peninsular Malaysia. A total of 90 (n=90) raw rice were examined and 84 (93.33%) samples were positive to vegetative cells of B. cereus. However, only 32 (35.56%) samples were positive for endospore cells that able to germinate after samples were heated at 75°C for 15 mins. The mean log cfu/g for vegetative cells were higher range (0.00 - 4.1533) than visible endospores (0.00 - 3.7533 mean log cfu/g). Sample of raw red rice (UKMRC9) had significantly higher contamination by both vegetative cells and endospores at p<0.05, than the other raw rice samples.

  6. Genetic parameters estimation on functional dryness traits of crossed black paddy rice "Baas Selem Cultivar X Situ Patenggang” variety

    Directory of Open Access Journals (Sweden)

    I.G.P.M. Aryana

    2014-07-01

    Full Text Available The aims of this study were to elucidate heritability and the role of drought traits genes of black paddy rice for determination base of the selection method to obtain drought tolerant and high yield potential of black paddy rice. The study was conducted through two experiments during February-November 2013. The first experiment was the establishment of populations from crosses carried out in the hybridization room. The second trial was evaluation of the genetic diversity of drought properties held in the greenhouse of the Faculty of Agriculture, University of Mataram. Planting was carried out in pots without experiment design. Population of P1 (parental-Situ Patenggang, P2 (parental-Baas Selem were 50 plants of each; population of F1, F1BC.1.2, and F1BC.1.1 were 25 plants of each, and 250 plants of F2, as well as control of drought susceptible variety (IR20 was 10 plants. To determine the heritability and the role of genes controlling drought traits were used index of bud dry and cure of IRRI standard. The results showed that crossing of black paddy rice "Baas Selem x Situ Patenggang” had relatively moderate heritability in broad sense and low heritability in narrow sense. In the crossed F1 population was found that gene action of drought trait was not perfectly dominant

  7. Productivity of sodic soils can be enhanced through the use of salt tolerant rice varieties and proper agronomic practices.

    Science.gov (United States)

    Singh, Y P; Mishra, V K; Singh, Sudhanshu; Sharma, D K; Singh, D; Singh, U S; Singh, R K; Haefele, S M; Ismail, A M

    2016-04-01

    Regaining the agricultural potential of sodic soils in the Indo-Gangetic plains necessitates the development of suitable salt tolerant rice varieties to provide an entry for other affordable agronomic and soil manipulation measures. Thus selection of high yielding rice varieties across a range of sodic soils is central. Evaluation of breeding lines through on-station and on-farm farmers' participatory varietal selection (FPVS) resulted in the identification of a short duration (110-115 days), high yielding and disease resistant salt-tolerant rice genotype 'CSR-89IR-8', which was later released as 'CSR43' in 2011. Several agronomic traits coupled with good grain quality and market value contributed to commercialization and quick adoption of this variety in the sodic areas of the Indo-Gangetic plains of eastern India. Management practices required for rice production in salt affected soils are evidently different from those in normal soils and practices for a short duration salt tolerant variety differ from those for medium to long duration varieties. Experiments were conducted at the Indian Council of Agricultural Research-Central Soil Salinity Research Institute (ICAR-CSSRI), Regional Research Station, Lucknow, Uttar Pradesh, India during 2011 and 2013 wet seasons, to test the hypothesis that combining matching management practices (Mmp) with an improved genotype would enhance productivity and profitability of rice in sodic soils. Mmp were developed on-station by optimizing existing best management practices (Bmp) recommended for the region to match the requirements of CSR43. The results revealed that transplanting 4 seedlings hill -1 at a spacing of 15 × 20 cm produced significantly higher yield over other treatments. The highest additional net gain was US$ 3.3 at 90 kg ha -1  N, and the lowest was US$ 0.4 at 150 kg ha -1  N. Above 150 kg ha -1 , the additional net gain became negative, indicating decreasing returns from additional N. Hence, 150

  8. Formation of Guaiacol by Spoilage Bacteria from Vanillic Acid, a Product of Rice Koji Cultivation, in Japanese Sake Brewing.

    Science.gov (United States)

    Ito, Toshihiko; Konno, Mahito; Shimura, Yoichiro; Watanabe, Seiei; Takahashi, Hitoshi; Hashizume, Katsumi

    2016-06-08

    The formation of guaiacol, a potent phenolic off-odor compound in the Japanese sake brewing process, was investigated. Eight rice koji samples were analyzed, and one contained guaiacol and 4-vinylguaiacol (4-VG) at extraordinarily high levels: 374 and 2433 μg/kg dry mass koji, respectively. All samples contained ferulic and vanillic acids at concentrations of mg/kg dry mass koji. Guaiacol forming microorganisms were isolated from four rice koji samples. They were identified as Bacillus subtilis, B. amyloliquefaciens/subtilis, and Staphylococcus gallinarum using 16S rRNA gene sequence. These spoilage bacteria convert vanillic acid to guaiacol and ferulic acid to 4-VG. However, they convert very little ferulic acid or 4-VG to guaiacol. Nine strains of koji fungi tested produced vanillic acid at the mg/kg dry mass koji level after cultivation. These results indicated that spoilage bacteria form guaiacol from vanillic acid, which is a product of koji cultivation in the sake brewing process.

  9. The impact of Rhizopus oryzae cultivation on rice bran: Gamma-oryzanol recovery and its antioxidant properties.

    Science.gov (United States)

    Massarolo, Kelly Cristina; Denardi de Souza, Taiana; Collazzo, Carolina Carvalho; Badiale Furlong, Eliana; Souza Soares, Leonor Almeida de

    2017-08-01

    This study evaluated the effect of the solid state cultivation (SSC) time of rice bran by Rhizopus oryzae on γ-oryzanol recovery and its antioxidant properties. Gamma-oryzanol was extracted with organic solvents and its extracts were characterized by GC-FID and HPLC-UV. The antioxidant capacity was assessed by DPPH and ABTS + assays, β-carotene/linoleic acid system, and reduction of oxidation in lipid system. The biomass showed the γ-oryzanol recovery increased by 51.5% (20.52mg/g), and 5.7% in polyunsaturated fatty acids. The γ-oryzanol major components changing in their profile. The γ-oryzanol extract from biomass (72h) showed the greatest DPPH inhibition (59.0%), while 90.5% inhibition of oxidation of β-carotene/linoleic acid system, and 30% reduction of the indicators of oxidation in olive oil was observed in the one cultivated at 96h, these behaviors were confirmed by PCA analyses. SSC provides an increase in the γ-oryzanol recovery followed by improving of the functional properties of rice bran. Copyright © 2017 Elsevier Ltd. All rights reserved.

  10. Detection of DNA fingerprints of cultivated rice by hybridization with a human minisatellite DNA probe

    International Nuclear Information System (INIS)

    Dallas, J.F.

    1988-01-01

    A human minisatellite DNA probe detects several restriction fragment length polymorphisms in cultivars of Asian and African rice. Certain fragments appear to be inherited in a Mendelian fashion and may represent unlinked loci. The hybridization patterns appear to be cultivar-specific and largely unchanged after the regeneration of plants from tissue culture. The results suggest that these regions of the rice genome may be used to generate cultivar-specific DNA fingerprints. The demonstration of similarity between a human minisatellite sequence and polymorphic regions in the rice genome suggests that such regions also occur in the genomes of many other plant species

  11. Characterization of total antioxidant capacity and (poly)phenolic compounds of differently pigmented rice varieties and their changes during domestic cooking.

    Science.gov (United States)

    Zaupa, Maria; Calani, Luca; Del Rio, Daniele; Brighenti, Furio; Pellegrini, Nicoletta

    2015-11-15

    In the recent years, the pigmented rice varieties are becoming more popular due to their antioxidant properties and phenolic content. In this study, we characterized the antioxidant capacity (TAC) and the phenolic profile in white, red and black rice varieties, and evaluated the effect of two cooking methods (i.e. "risotto" and boiling) on these compounds. Before the cooking, all the varieties contained several phenolic acids, whereas anthocyanins and flavonols were peculiar of black rice and flavan-3-ols of red rice. Among the rice varieties, the black had the highest TAC value. The content of (poly)phenolic compounds and TAC decreased after cooking in all three varieties, but to a lesser extent after the risotto method. As a consequence, the risotto cooking, which allows a complete absorption of water, would be a good cooking method to retain (poly)phenolic compounds and TAC in pigmented and non-pigmented whole-meal rice. Copyright © 2015 Elsevier Ltd. All rights reserved.

  12. Effect of parboiling on the formation of resistant starch, digestibility and functional properties of rice flour from different varieties grown in Sri Lanka.

    Science.gov (United States)

    Gunaratne, Anil; Kao, Wu; Ratnayaka, Jennet; Collado, Lilia; Corke, Harold

    2013-08-30

    Hydrothermal treatment used in parboiling could induce formation of novel starch properties having potential food applications. In the current work, functional, digestible and retrogradation properties of flour from non-parboiled and steamed parboiled six rice varieties with high amylose content of around 30% but differing in length and width ratio were investigated and compared. The parboiling process reduced swelling volume and amylose leaching in all tested varieties. Among the varieties studied, the resistant starch content ranged from 1.6% in AT 306 to 0.46% in BG 357. Parboiling reduced the resistant starch content in AT 306 by about 50%, but it did not significantly affect the resistant starch content of the other varieties. The amylose-lipid complex remained unchanged after parboiling. Amylopectin retrogradation was not observed in parboiled rice. Amylose retrogradation was not seen except for AT 306. Pasting behaviour of parboiled rice flours showed high pasting stability and low setback. Flours were more susceptible to enzymatic hydrolysis after parboiling. Partial gelatinisation during parboiling was sufficient to produce grains with excellent milling quality showing a head rice recovery that ranged from 98% to 100% among the varieties studied. Degree of gelatinisation is the most important factor that determines the high head rice recovery. High pasting stability and low setback of flour of parboiled rice indicate some potential food applications. © 2013 Society of Chemical Industry.

  13. History and conservation of wild and cultivated plant diversity in Uganda: Forest species and banana varieties as case studies

    Directory of Open Access Journals (Sweden)

    Alan C. Hamilton

    2016-02-01

    Full Text Available The history of wild and cultivated plant diversity in Uganda is reviewed, taking forest species and bananas as examples. Palynological research into past human influences on forests is reassessed. The evidence suggests that crops were first introduced into the country at about 1000 BCE, farming communities practicing slash and burn agriculture started to significantly influence the floristic composition of forests during the 1st millennium BCE and there was a major episode of forest reduction at about 1000 CE related to socio-economic change. Bananas were probably introduced in the early centuries CE. The colonial era from 1894 saw the introduction of new concepts of land ownership and the establishment of forest reserves and agricultural stations. Forests and banana diversity are currently under threat, Uganda having a very high rate of deforestation and endemic banana varieties proving susceptible to introduced pests and diseases. It is suggested that, under these circumstances, conservationists take an opportunistic approach to field engagement, making use of favourable local conditions as they arise. Partnerships should be sought with elements of society concerned with sustainable use, provision of ecosystem services and cultural survival to widen the social base of plant conservation. International organisations involved in conservation of plant genetic resources and wild plant species should collaborate with one another to develop the conceptual basis of plant conservation, to make it more relevant to countries like Uganda.

  14. Heavy metal toxicity in rice and soybean plants cultivated in contaminated soil

    Directory of Open Access Journals (Sweden)

    Maria Lígia de Souza Silva

    2014-04-01

    Full Text Available Heavy metals can accumulate in soil and cause phytotoxicity in plants with some specific symptoms. The present study evaluated the specific symptoms on rice and soybeans plants caused by excess of heavy metals in soil. Rice and soybean were grown in pots containing soil with different levels of heavy metals. A completely randomized design was used, with four replications, using two crop species and seven sample soils with different contamination levels. Rice and soybean exhibited different responses to the high concentrations of heavy metals in the soil. Rice plants accumulated higher Cu, Mn, Pb and Zn concentrations and were more sensitive to high concentrations of these elements in the soil, absorbing them more easily compared to the soybean plants. However, high available Zn concentrations in the soil caused phytotoxicity symptoms in rice and soybean, mainly chlorosis and inhibited plant growth. Further, high Zn concentrations in the soil reduced the Fe concentration in the shoots of soybean and rice plants to levels considered deficient.

  15. The Sequences of 1504 Mutants in the Model Rice Variety Kitaake Facilitate Rapid Functional Genomic Studies.

    Science.gov (United States)

    Li, Guotian; Jain, Rashmi; Chern, Mawsheng; Pham, Nikki T; Martin, Joel A; Wei, Tong; Schackwitz, Wendy S; Lipzen, Anna M; Duong, Phat Q; Jones, Kyle C; Jiang, Liangrong; Ruan, Deling; Bauer, Diane; Peng, Yi; Barry, Kerrie W; Schmutz, Jeremy; Ronald, Pamela C

    2017-06-01

    The availability of a whole-genome sequenced mutant population and the cataloging of mutations of each line at a single-nucleotide resolution facilitate functional genomic analysis. To this end, we generated and sequenced a fast-neutron-induced mutant population in the model rice cultivar Kitaake ( Oryza sativa ssp japonica ), which completes its life cycle in 9 weeks. We sequenced 1504 mutant lines at 45-fold coverage and identified 91,513 mutations affecting 32,307 genes, i.e., 58% of all rice genes. We detected an average of 61 mutations per line. Mutation types include single-base substitutions, deletions, insertions, inversions, translocations, and tandem duplications. We observed a high proportion of loss-of-function mutations. We identified an inversion affecting a single gene as the causative mutation for the short-grain phenotype in one mutant line. This result reveals the usefulness of the resource for efficient, cost-effective identification of genes conferring specific phenotypes. To facilitate public access to this genetic resource, we established an open access database called KitBase that provides access to sequence data and seed stocks. This population complements other available mutant collections and gene-editing technologies. This work demonstrates how inexpensive next-generation sequencing can be applied to generate a high-density catalog of mutations. © 2017 American Society of Plant Biologists. All rights reserved.

  16. Modelagem da emissão de folhas em arroz cultivado e em arroz-vermelho Modeling leaf appearance in cultivated rice and red rice

    Directory of Open Access Journals (Sweden)

    Nereu Augusto Streck

    2008-05-01

    Full Text Available O objetivo deste trabalho foi simular o aparecimento de folhas em genótipos de arroz cultivados e em biótipos de arroz-vermelho por meio da adaptação do modelo de Wang e Engel, modificado por Streck et al. Dois experimentos foram conduzidos em Santa Maria, RS, em 2004/2005 e 2005/2006. Foram utilizadas as cultivares IRGA 417 e EEA 406, um híbrido e dois biótipos de arroz-vermelho. O modelo de aparecimento de folhas foi ajustado para os genótipos usando-se dados de estágio de Haun (HS, de cinco épocas de semeadura, em 2004/2005, e a avaliação do modelo foi feita com dados de HS medidos em três épocas de semeadura, em 2005/2006. Realizou-se também um experimento numérico utilizando-se dados de temperatura de 2003/2004 e de 2006/2007, e comparou-se o HS simulado dos genótipos cultivados em relação aos biótipos de arroz-vermelho. O modelo apresentou bom desempenho para simular o HS com raiz do quadrado médio do erro geralmente menor do que uma folha. A emissão de folhas na haste principal foi maior nos genótipos modernos - IRGA 417 e híbrido - do que no genótipo tradicional EEA 406. A emissão de folhas é diferente em distintos biótipos de arroz-vermelho.The objective of this work was to simulate leaf appearance in cultivated rice genotypes and in red rice biotypes, by adapting the Wang and Engel model modified by Streck et al. Two experiments were conducted in Santa Maria, Rio Grande do Sul State, Brazil, during 2004/2005 and 2005/2006 growing seasons. Cultivars IRGA 417 and EEA 406, one hybrid, and two red rice biotypes were used. The leaf appearance model was adjusted, using Haun Stage (HS data from five sowing dates of 2004/2005 growing season, and the model evaluation was performed using HS data from three sowing dates of 2005/2006 growing season. A numerical experiment was also carried out using temperature data occurred during 2003/2004 and 2006/2007 growing seasons, and simulated HS of the cultivated rice genotypes

  17. Improvement of local varieties of rice (Oryza glaberrima) for resistance to shattering and grain quality by induced mutations

    Energy Technology Data Exchange (ETDEWEB)

    Cisse, F; Dione, M; Kelly, S [Institute d` Economie Rurale, Station de Recherche Agronomique, Mopti (Mali)

    1997-12-01

    In Mali, a large area of rice is planted with the local rice, O. glaberrima which under conditions of low rainfall and flood water is more hardy to stress than the introduced O. sativa cultivars. A program to improve the local varieties of O. glaberrima by induced mutations was started in 1988. Ten local varieties were irradiated with 20 and 30 krad. In M{sub 4} of cv. `Gorbal`, irradiated with 20 krads, 13 variants were selected. Five of these were evaluated in M{sub 5} for their agronomic performance. The induced mutants in the remaining 9 varieties were highly sterile with 90% or more sterility in the M{sub 2} and M{sub 3}. Irradiation with 20-30 krad gave high survival (70-95%), and several mutants with white kernel were obtained from the red seeded types. Nearly two-third of the identified mutants had white caryopsis. There is better consumer acceptance of the white seeded type of rice than the red seeded varieties in Mali and the white seeded mutants may have an added premium in the market. The field performance of the M{sub 5} mutants was investigated. Preliminary results showed that some of mutants derived from cv. `Gorbal` were early in maturity and had more panicles per plant, but had a lower 1000-kernel weight, and did not differ from the parent in grain yield. Additional trials are planned to establish potential of the mutants for yield and quality. Three more cultivars of O. glaberrima - `Haira`, `Tombo` and `Yele` - were irradiated with 20 and 60 krads, and gave 75, 81 and 72% seed viability, respectively. M{sub 1} showed reduced plant height. Selection for non-shattering of grains shall be carried out in M{sub 2}. Any plants which are non-shattering but sterile shall be crossed with the parent to recover the mutant types. The taxonomic status of cv. `Gorbal` is not very clear. Isozyme patterns suggest that this cultivar may belong to O. sativa and not to O. glaberrima. To establish its taxonomic status, crosses shall be made with O. sativa and O

  18. Improvement of local varieties of rice (Oryza glaberrima) for resistance to shattering and grain quality by induced mutations

    International Nuclear Information System (INIS)

    Cisse, F.; Dione, M.; Kelly, S.

    1997-01-01

    In Mali, a large area of rice is planted with the local rice, O. glaberrima which under conditions of low rainfall and flood water is more hardy to stress than the introduced O. sativa cultivars. A program to improve the local varieties of O. glaberrima by induced mutations was started in 1988. Ten local varieties were irradiated with 20 and 30 krad. In M 4 of cv. 'Gorbal', irradiated with 20 krads, 13 variants were selected. Five of these were evaluated in M 5 for their agronomic performance. The induced mutants in the remaining 9 varieties were highly sterile with 90% or more sterility in the M 2 and M 3 . Irradiation with 20-30 krad gave high survival (70-95%), and several mutants with white kernel were obtained from the red seeded types. Nearly two-third of the identified mutants had white caryopsis. There is better consumer acceptance of the white seeded type of rice than the red seeded varieties in Mali and the white seeded mutants may have an added premium in the market. The field performance of the M 5 mutants was investigated. Preliminary results showed that some of mutants derived from cv. 'Gorbal' were early in maturity and had more panicles per plant, but had a lower 1000-kernel weight, and did not differ from the parent in grain yield. Additional trials are planned to establish potential of the mutants for yield and quality. Three more cultivars of O. glaberrima - 'Haira', 'Tombo' and 'Yele' - were irradiated with 20 and 60 krads, and gave 75, 81 and 72% seed viability, respectively. M 1 showed reduced plant height. Selection for non-shattering of grains shall be carried out in M 2 . Any plants which are non-shattering but sterile shall be crossed with the parent to recover the mutant types. The taxonomic status of cv. 'Gorbal' is not very clear. Isozyme patterns suggest that this cultivar may belong to O. sativa and not to O. glaberrima. To establish its taxonomic status, crosses shall be made with O. sativa and O. glaberrima. (author). 2 tabs

  19. Study on Analysis of Variance on the indigenous wild and cultivated rice species of Manipur Valley

    Science.gov (United States)

    Medhabati, K.; Rohinikumar, M.; Rajiv Das, K.; Henary, Ch.; Dikash, Th.

    2012-10-01

    The analysis of variance revealed considerable variation among the cultivars and the wild species for yield and other quantitative characters in both the years of investigation. The highly significant differences among the cultivars in year wise and pooled analysis of variance for all the 12 characters reveal that there are enough genetic variabilities for all the characters studied. The existence of genetic variability is of paramount importance for starting a judicious plant breeding programme. Since introduced high yielding rice cultivars usually do not perform well. Improvement of indigenous cultivars is a clear choice for increase of rice production. The genetic variability of 37 rice germplasms in 12 agronomic characters estimated in the present study can be used in breeding programme

  20. An Investigation of Factors Affecting the Management of Risk for the Rice Cultivating Women in Sari Town with LISREL Application

    Directory of Open Access Journals (Sweden)

    M. charmchian Langerodi

    2016-03-01

    Full Text Available Introduction Agriculture relies on nature and farmers face environmental, social, financial and legal issues that makes farming to be consistently and strongly associated with risk. Agriculture can be considered to be the most risky economic venture. Ahmadi (1 listed several main sources of risk that farmers face. Economic risk includes price fluctuations for raw materials such as seed and fertilizer and for machinery at the pre-market delivery stage, difficulty obtaining bank credit and loans, price volatility for products in the post market delivery stage, inconsistent government policies for products and global fluctuations in the price of products. Social risk includes theft of crops, production and agricultural machinery and war. Nature-related risk includes natural disasters, climate change, agricultural pests and diseases. Market risk includes changes in the price of raw materials and products and increasing interest rates. Given that the range of agricultural activities having critical risk are diverse and the climate can vary widely, more sophisticated services are needed to meet the demands, cope with hazards and decrease risk. Understanding how women rice farmers deal with risk is essential for educators, and agriculture-related industries such as insurance, and policymakers. If the attitudes of these women towards risk are accurately recognized, risk management strategies, risk-related educational programs and risk strategies can be designed to meet their needs. The overallaim of this research isto investigate factors affecting risk management, and proposing and designing a model among rice cultivating women in Sari. Materials and Methods: The population of the study comprised 1677rice cultivating women in Sari of whom 248 were selected through stratified random sampling. A combination of quantitative, and descriptive-inferential statistics served as the methodology for the study and SPSS 16 and LISREL were applied for data analysis

  1. Determination of Cadmium and Lead levels in high consumed rice (Oryza Sativa L. cultivated in Lorestan province and its comparison with national standards

    Directory of Open Access Journals (Sweden)

    roshanak Hedayatifar

    2011-03-01

    Full Text Available Rice is the main food of people in Iran and about 2.4 billion of the world population. Although its cultivation areas are less than wheat but 85% of the total product is used by people. Consumption of rice per person is estimated 42.5 kg in Iran. So it is the second high consumed agricultural product. The aim of this study was determination amount of toxic and heavy metals in high consumed rice varites cultivated in different areas of Lorestan province. Materials and Methods: In this study 99 rice samples (Tarem and Domsiah cultivated in three areas of Lorestan( khorramabad, Dorud and Borujerd province were collected. Amount of Lead and Cadmium were analyzed by atomic absorption model BRAIC WFX 130. Data were gathered and analyzed by SPSS software and compared with national standards. Results: The results for Cd and Pb were 0.037±0.06 and 0.077±0.08 mg/kg respectively. Conclusion: Cadmium and Lead levels in rice samples caltivated in Lorestan province were less than Permissible limit, so there is no risk for human health.

  2. African rice (Oryza glaberrima) cultivation in the Togo Hills: ecological and socio-cultural cues in farmer seed selection and development

    NARCIS (Netherlands)

    Teeken, B.W.E.

    2015-01-01

    Abstract

    Teeken B (2015). African rice (Oryza glaberrima) cultivation in the Togo Hills: ecological and socio-cultural cues in farmer seed selection and development. PhD thesis, Wageningen University, The Netherlands, 306 pp. The low adoption rates of

  3. The relationship between Anopheles gambiae density and rice cultivation in the savannah zone and forest zone of Côte d'Ivoire.

    Science.gov (United States)

    Briët, Olivier J T; Dossou-Yovo, Joel; Akodo, Elena; van de Giesen, Nick; Teuscher, Thomas M

    2003-05-01

    In 13 villages in the savannah zone and 21 villages in the forest zone of Côte d'Ivoire, the biting density of the principal malaria vector, Anopheles gambiae, was studied as a function of rice cultivation in the inland valleys in a 2-km radius around each village. In the savannah villages, during the main season cropping period, surface water on rice-cultivated and to a lesser extent on uncultivated inland valleys seems to contribute strongly to the A. gambiae population density. For the off-season cropping period (which starts after the first light rains in the savannah zone), correlations were weaker. Breeding sites other than in inland valleys may play an important role in the savannah zone. In the forest zone, however, the A. gambiae population density was strongly correlated with the surface water availability (SWA) in the rice-cultivated inland valleys, whereas the correlation with the SWA in other (uncultivated) inland valleys was weak. The requirement of sunlit breeding sites for A. gambiae might explain this difference between zones. In the forest zone, only inland valleys cleared for rice cultivation meet this requirement, whereas all other inland valleys are covered with dense vegetation. In the savannah zone, however, most undergrowth is burnt during the dry season, which permits sunlight to reach puddles resulting from the first rains.

  4. Uptake of fertilizer phosphorus by three rice varieties in a vertisol

    International Nuclear Information System (INIS)

    Sinha, S.B.; Rastogi, A.K.; Mahajan, J.P.

    1980-01-01

    A pot experiment was conducted using labelled super-phosphate to study the utilization of fertilizer phosphorus by three paddy varieties, viz, Jaya, Ratna and Sona. Total P uptake and P derived from fertilizer, increased significantly with increasing levels of P applied (0 to 90 kg P 2 O 5 /ha), while the percent utilization of applied P showed a reverse trend. Straw and grain yield, in general, increased significantly with increasing P levels in all the three varieties. Average soil P uptake in grain and straw decreased with increasing levels of applied phosphorus. (author)

  5. Population Genetic Structure of Cochliobolus miyabeanus on Cultivated Wild Rice (Zizania palustris L.) in Minnesota

    Science.gov (United States)

    Cochliobolus miyabeanus (Bipolaris oryzae) is the causal agent of fungal brown spot (FBS) in wild rice (Zizania palustris L.), an aquatic grass, endemic in Minnesota, Wisconsin, and parts of Canada. Grain yield losses can reach up to 74% when the disease starts at the boot stage and continues until ...

  6. The buffering capacity of stems: genetic architecture of nonstructural carbohydrates in cultivated Asian rice, Oryza sativa.

    Science.gov (United States)

    Wang, Diane R; Han, Rongkui; Wolfrum, Edward J; McCouch, Susan R

    2017-07-01

    Harnessing stem carbohydrate dynamics in grasses offers an opportunity to help meet future demands for plant-based food, fiber and fuel production, but requires a greater understanding of the genetic controls that govern the synthesis, interconversion and transport of such energy reserves. We map out a blueprint of the genetic architecture of rice (Oryza sativa) stem nonstructural carbohydrates (NSC) at two critical developmental time-points using a subpopulation-specific genome-wide association approach on two diverse germplasm panels followed by quantitative trait loci (QTL) mapping in a biparental population. Overall, 26 QTL are identified; three are detected in multiple panels and are associated with starch-at-maturity, sucrose-at-maturity and NSC-at-heading. They tag OsHXK6 (rice hexokinase), ISA2 (rice isoamylase) and a tandem array of sugar transporters. This study provides the foundation for more in-depth molecular investigation to validate candidate genes underlying rice stem NSC and informs future comparative studies in other agronomically vital grass species. © 2017 The Authors. New Phytologist © 2017 New Phytologist Trust.

  7. Characterization of 140 Japanese and world rice collections cultivated in Nihonmatsu-city in Fukushima in terms of radiocesium activity concentrations in seed grains and straws to explore rice cultivars with low radiocesium accumulation

    International Nuclear Information System (INIS)

    Katsuhiro Kojima; Djedidi Salem

    2017-01-01

    We studied varietal difference in radiocesium accumulation by using Japanese and World rice collection for future development of low accumulation varieties. As a result, the radiocesium activity concentration varied by 12- and 22-fold in seed grains and straws, respectively. When we examined the seed grain to straw ratio of radiocesium activity concentration, paddy rice cultivars of Japonica sub-species showed a lower result than Indica and Javanica paddy rice cultivars. These observations suggest that the Japonica paddy rice cultivars may have the property of repressing radioactive cesium translocation to edible parts. (author)

  8. Variability, heritability and genetic advance in F2 populations of aromatic rice involving induced mutants and Basmati varieties

    International Nuclear Information System (INIS)

    Hasib, K.M.; Ganguli, P.K.; Kole, P.C.

    2000-01-01

    The F 2 generation of five cross-combinations of aromatic rice involving two induced mutants 124-17-4 and 21-6-1 of aromatic tall Indica cultivar Gobindabhog and three basmati varieties was studied for mean performance, variability, heritability and genetic advance. The cross 21-6-1/Pakistan Basmati showed higher mean values for grain yield plant, and several yield components. Wide variability was observed for panicle number plant, filled grains panicle, test weight, dry matter production plant, harvest index and grain yield plant. Among the traits, filled grains panicle and test weight in all the crosses, grain yield plant, in five crosses and harvest index in two crosses had high heritability coupled with high genetic advance indicating predominant role of additive gene action. The crosses 21-6-1/Pakistan Basmati and 124-17-4/Pusa Basmati I could be exploited for isolation of promising aromatic recombinants. (author)

  9. Studies on the physiological and ecological characteristics of high yielding rice variety with high fertilizer response, (3)

    International Nuclear Information System (INIS)

    Hayami, Kazuhiko

    1983-01-01

    As the characteristics of this rice variety, in order to heighten the efficiency of receiving and supplying systems and to maintain balance between them, it is necessary to increase the nitrogen-absorbing ability in the latter period of growth. For the purpose, it is important to clarify the relation among the distribution of root population, respiration activity and nutrient absorption, and the distribution and movement in the plants. As the results of investigation made from this viewpoit, clear difference was observed about the distribution of root population and activity among the varieties. It was confirmed that these facts were based on the amount of root development and extending angle in close relation to the nutrition of nitrogen and carbon hydrate in the parts above ground. The distribution of root population of lower layer distribution and activity type in improved varieties, the control of the respiration activity of root population by the photosynthesis ability of plant population through the supply of assimilated products and so on were clarified. The improvement of plants has been advanced so as to increase the distribution of root population and activity. (Kako, I.)

  10. Evolution of new rice varieties by induced mutations to increase yield and resistance to diseases and to improve seed quality

    International Nuclear Information System (INIS)

    Miah, A.J.; Bhatti, I.M.

    1968-01-01

    Seeds of two indica rice varieties namely, Kangni-27 (a coarse variety) and Dokri Basmati (a fine variety) were irradiated with 20, 25, 30, 35, 40, 45 and 50 kR of gamma rays from a 13,000-Ci 60 Co source. In the M 1 generation (1964), germination percentage, seedling height and seed fertility were studied. The data indicated that Kangni-27 is more radioresistant than Dokri Basmati. In the M 2 generation (1965) two polygenic traits, i.e. leaf size and grains per unit length were studied. From the analysis of the data it was found that variability was greater in the irradiated populations than in the non-irradiated controls. Apart from the study of the polygenic traits, several mutants which appeared to be useful to the breeder (e.g. dwarf, short-culm and early flowering) were isolated form the irradiated populations of Kangni-27. In the M 3 generation (1966) several agronomically important characters were studied in all the mutants isolated in the M 2 generation. It was noticed that the mean values of most of the characters of all the mutants deviated from the mean values of the respective controls. These deviations were both negative and positive. Further analysis is in progress. Three more experiments were started, two in the year 1965 on the effects of gamma rays and one in 1966 to compare the effects of EMS and gamma rays. (author). 31 refs, 3 figs, 6 tabs

  11. 有机水稻的种植技术研究%Research of Organic rice cultivation technology

    Institute of Scientific and Technical Information of China (English)

    雷燕铭

    2013-01-01

      近年来,随着我国国民经济的发展,国民对生态环境问题普遍关注,对食品安全和无公害要求进一步提高。在此基础上,安全、清洁、无污染的有机农业逐渐兴起,成为种植业的发展热点。文章以有机水稻的种植为切入点,结合笔者自身工作经验和福建省的探索实例,介绍了有机农业与有机水稻技术,从有机水稻的种植条件、土肥管理、育苗管理、秧田管理、病虫害防治等方面,浅谈了有机水稻的种植技术。%In recent years, with the development of China's national economy,people pay more attention on issues of the environment and they have higher requirements about food safety and pollution-free food. On this basis, safe, clean, non-polluting organic agriculture is gradually emerging as a growing industry . The articles analyses organic rice cultiva-tion as the starting point,according to the author's own work experience and exploring examples of Fujian Province, the ar-ticle introduces the technology of organic agriculture and organic rice and analyses organic rice planting techniques from aspects of growing conditions and soil and fertilizer management and nursery management and seedling management and pest control, etc.

  12. SSR allelic variation of rice variety Hangxiangnuo bred by space mutation

    International Nuclear Information System (INIS)

    Yang Tifeng; Liu Chuanguang; Pan Dajian; Fan Zhilan; Li Chen; Chen Jianyou; Liu Bin; Jiang Yijun; Gao Yun; Zhou Hanqin

    2011-01-01

    Hangxiangnuo, an indica fragrant glutinous rice mutant, was induced by space environment. Comparing with its wild type Nanfengnuo, the yield and blast resistance of Hangxiangnuo are improved significantly and the grain shape became slender and with fragrance. To understand the mechanisms of space mutation and identify the changes at molecular level associated with phenotypic variations, SSR allelic variation analysis were performed on Hangxiangnuo and Nanfengnuo in this study. The results showed that 45 loci were polymorphic among the 156 SSR loci tested throughout the genome, the frequency of variation was 28.85%. Among the polymorphic loci, 42 loci only showed variations in the molecular weight of the amplified bands, only on locus increased the number of amplification bands in Hangxiangnuo and two loci were differed by heterozygous loci (with two amplification bands at one locus) detected in Nanfengnuo and homozygous loci in Hangxiangnuo. It suggests that the change of some loci in mutants was due to the normal segregation and recombination of heterozygous loci of the wild type. The variation frequencies among different chromosomes were quite different, with the highest one at 50.00% detected on chromosomes 7, 8 and 12, and the lowest at 6.25% on chromosome 6. The polymorphic loci were clustered on chromosomes throughout the genome indicating that large DNA segments mutation is one of the major variation patterns induced by space environment. Some of reported QTLs involved in grain shape, yield, fragrance and blast resistance were found to be located exactly in the mutated regions. Therefore, further study is needed to confirm that these QTLs are responsible for the trait variations. (authors)

  13. Assessing the effects of cultivating genetically modified glyphosate-tolerant varieties of soybeans (Glycine max (L.) Merr.) on populations of field arthropods.

    Science.gov (United States)

    Imura, Osamu; Shi, Kun; Iimura, Keiji; Takamizo, Tadashi

    2010-01-01

    We assessed the effects of cultivating two genetically modified (GM) glyphosate-tolerant soybean varieties (Glycine max (L.) Merr.) derived from Event 40-3-2 and a Japanese conventional variety on arthropods under field conditions, with weed control using glyphosate and conventional weed control for two years. Plant height and dry weight of the conventional variety were significantly larger than those of the GM varieties, but the GM varieties bore more pods than the conventional variety. We found arthropods of nine taxonomic orders (Araneae, Acari, Thysanoptera, Homoptera, Heteroptera, Coleoptera, Diptera, Lepidoptera, and Hymenoptera) on the plants. The arthropod incidence (number per plant unit weight pooled for each taxonomic order) on the soybean stems and leaves generally did not differ significantly between the GM and conventional varieties. However, the incidence of Thysanoptera and total incidence (all orders combined) were greater on the GM variety in the second year. The weed control regimes had no significant influence on the arthropod incidence on the soybean stems and leaves. The number of flower-inhabiting Thysanoptera (the dominant arthropod in the flowers) was not significantly different between the GM and conventional varieties. Asphondylia yushimai (Diptera, Cecidomyiidae) was more numerous on the pods of the GM variety in both years. Neither the soybean variety nor the weed control regime significantly affected the density of soil macro-organisms. However, the glyphosate weed control affected arthropods between the rows of plants by decreasing the abundances of Homoptera, Heteroptera, Coleoptera and Lepidoptera, and diversity of arthropods. © ISBR, EDP Sciences, 2011.

  14. New cultive medium for bioconversion of C5 fraction from sugarcane bagasse using rice bran extract

    Directory of Open Access Journals (Sweden)

    Debora Danielle Virginio da Silva

    2014-12-01

    Full Text Available The use of hemicellulosic hydrolysates in bioprocesses requires supplementation as to ensure the best fermentative performance of microorganisms. However, in light of conflicting data in the literature, it is necessary to establish an inexpensive and applicable medium for the development of bioprocesses. This paper evaluates the fermentative performance of Scheffersomyces (Pichia stipitis and Candida guilliermondii growth in sugarcane bagasse hemicellulosic hydrolysate supplemented with different nitrogen sources including rice bran extract, an important by-product of agroindustry and source of vitamins and amino acids. Experiments were carried out with hydrolysate supplemented with rice bran extract and (NH42SO4; peptone and yeast extract; (NH42SO4, peptone and yeast extract and non-supplemented hydrolysate as a control. S. stipitis produced only ethanol, while C. guilliermondii produced xylitol as the main product and ethanol as by-product. Maximum ethanol production by S. stipitis was observed when sugarcane bagasse hemicellulosic hydrolysate was supplemented with (NH42SO4, peptone and yeast extract. Differently, the maximum xylitol formation by C. guilliermondii was obtained by employing hydrolysate supplemented with (NH42SO4 and rice bran extract. Together, these findings indicate that: a for both yeasts (NH42SO4 was required as an inorganic nitrogen source to supplement sugarcane bagasse hydrolysate; b for S. stipitis, sugarcane hemicellulosic hydrolysate must be supplemented with peptone and yeast extract as organic nitrogen source; and: c for C. guilliermondii, it must be supplemented with rice bran extract. The present study designed a fermentation medium employing hemicellulosic hydrolysate and provides a basis for studies about value-added products as ethanol and xylitol from lignocellulosic materials.

  15. Effect of explant density and volume of cultivation medium on in-vitro multiplication of blueberry (Vaccinium corymbosum L. varieties "Brigitta" and "Legacy"

    Directory of Open Access Journals (Sweden)

    Mario Rodríguez Beraud

    2015-03-01

    Full Text Available The objective of the investigation was to evaluate the in-vitro multiplication of two varieties of blueberry (Vaccinium corymbosum L., “Brigitta” and “Legacy” in response to five explants densities (5, 10, 15, 20 and 25 and four flask volumes (10, 20, 30 and 40 mL for cultivation. For both varieties the cultivation medium WPM (Woody Plant Medium was used. The experiment was completely randomized with 20 treatments and 12 repetitions per treatment. After 45 days of cultivation we evaluated the height of shoots, number of shoots/explant, number of nodes/shoot and number of shoots/flask. Variety “Brigitta” had highest shoots at higher densities and flask volumes, while variety “Legacy” had the highest average shoot height with intermediate densities and high volumes. Regarding the number of shoots/explant, the volume of the medium had no influence on “Brigitta”, however, higher plant densities affected this parameter. With variety “Legacy” the maximum number of shoots was achieved with lower plant densities and intermediate culture volumes per flask. In relation to the number of nodes per explant "Brigitta had lower numbers as compared to “Legacy”, but with both varieties the number of nodes decresed with smaller volumes of medium in the flasks. For the number of shoots per flask, “Brigitta” responsed best at higher densities exceeding 40 shoots per flask. In contrast, “Legacy” produced maximum results at density of 25 explants in 30 mL of medium. It is concluded that for the optimum multiplication of both varieties the correct selection of both, the planting density and the volume of multiplication medium are important.

  16. Comparative Analysis of γ-Oryzanol, β-Glucan, Total Phenolic Content and Antioxidant Activity in Fermented Rice Bran of Different Varieties

    Directory of Open Access Journals (Sweden)

    Tae-Dong Jung

    2017-06-01

    Full Text Available Rice bran, a by-product derived from processing rice, is a rich source of bioactive compounds. Recent studies have suggested that the fermentation can improve their biological activities. This study aimed to determined the level of γ-oryzanol, β-glucan and total phenol contents of fermented rice bran from 21 Korean varieties, as well as to evaluate their antioxidant activities. We also assessed the validation of the analytical method for determining γ-oryzanol content in fermented rice brans. Among the fermented rice brans, the Haedam rice bran contained the highest level of total phenol content (156.08 mg gallic acid equivalents/g, DPPH (2,2-diphenyl-1-picrylhydrazyl radical scavenging activity (71.30% and ORAC (Oxygen radical absorbance capacity value (1101.31 μM trolox equivalents/g. Furthermore, the fermented Migwang rice bran showed the highest level of γ-oryzanol content (294.77 ± 6.74 mg/100 g.

  17. Characteristics and genetic mapping of a lesion mimic mutant pl(t) in japonica rice variety zhejing 22

    International Nuclear Information System (INIS)

    Chen Pingping; Zhang Xiaoming; Ye Shenghai; Zhao Ningchun; Lu Yanting; Liu Heqin; Jin Qingsheng; Yang Ling

    2010-01-01

    A lesion mimic mutant,obtained by radiation mutagenesis on the seeds of a japonica rice variety Zhejing 22, exhibited a lesion mimic phenotype during the whole growth stage under different environments. Genetic analysis indicated that the mutant trait was controlled by a single recessive gene named spl (t). Relying on simple sequence repeat (SSR) and recessive class analysis method to map the spl (t) gene with a F 2 population was constructed by crossing the mutant spl (t) with Zhenshan 97B.spl (t) was mapped in the interval of 0.8cM between RM7195 and RM27929 near centromere region on the short arm of chromosome 12.Blue trypan dye analyses indicated that the lesion mimic trait of the mutant was caused by the programmer cell death. Further study showed that the programmer cell death was caused by H 2 O 2 oxidative burst. By inoculation of bacterial leaf blight and blast strains, the resistances of the mutant were similar to the wild variety Zhejing 22. (authors)

  18. Long-term rice cultivation stabilizes soil organic carbon and promotes soil microbial activity in a salt marsh derived soil chronosequence

    Science.gov (United States)

    Wang, Ping; Liu, Yalong; Li, Lianqing; Cheng, Kun; Zheng, Jufeng; Zhang, Xuhui; Zheng, Jinwei; Joseph, Stephen; Pan, Genxing

    2015-01-01

    Soil organic carbon (SOC) sequestration with enhanced stable carbon storage has been widely accepted as a very important ecosystem property. Yet, the link between carbon stability and bio-activity for ecosystem functioning with OC accumulation in field soils has not been characterized. We assessed the changes in microbial activity versus carbon stability along a paddy soil chronosequence shifting from salt marsh in East China. We used mean weight diameter, normalized enzyme activity (NEA) and carbon gain from straw amendment for addressing soil aggregation, microbial biochemical activity and potential C sequestration, respectively. In addition, a response ratio was employed to infer the changes in all analyzed parameters with prolonged rice cultivation. While stable carbon pools varied with total SOC accumulation, soil respiration and both bacterial and fungal diversity were relatively constant in the rice soils. Bacterial abundance and NEA were positively but highly correlated to total SOC accumulation, indicating an enhanced bio-activity with carbon stabilization. This could be linked to an enhancement of particulate organic carbon pool due to physical protection with enhanced soil aggregation in the rice soils under long-term rice cultivation. However, the mechanism underpinning these changes should be explored in future studies in rice soils where dynamic redox conditions exist. PMID:26503629

  19. Skin disease among farmers using wastewater in rice cultivation in Nam Dinh, Vietnam

    DEFF Research Database (Denmark)

    Do, Thuy Trang; van der Hoek, Wim; Nguyen, Dang Tuan

    2007-01-01

    for skin disease were involvement in agriculture in general (RR = 2.59, 95% CI 1.11-6.02), flower cultivation (RR = 1.36, 95% CI 1.01-1.83), vegetable farming (RR = 1.47, 95% CI 1.04-2.08), and a history of eczema (RR = 1.47, 95% CI 1.05-2.05). CONCLUSION: Exposure to wastewater is a major risk factor...

  20. Characterization of QTL for unique agronomic traits of new-plant-type rice varieties using introgression lines of IR64

    Directory of Open Access Journals (Sweden)

    Analiza G. Tagle

    2016-02-01

    Full Text Available To enhance the yield potential of an elite indica rice cultivar, an introgression (BC3-derived line of IR64, YTH288, was developed using a new-plant-type cultivar, IR66215-44-2-3, as a donor parent. YTH288 has agronomically valuable characteristics such as large panicles, few unproductive tillers, and large leaves inherited from NPT. To identify the genetic basis of these traits, we used 167 F2 plants derived from a cross between IR64 and YTH288 to conduct QTL analysis for five agronomic traits: days to heading (DTH, culm length (CL, flag leaf length (FLL, flag leaf width (FLW, and filled spikelet number per panicle (FSN. Six putative QTL were detected: four on chromosome 4 (for CL, FLL, FLW, and FSN and two on chromosome 2 (for DTH and FLL. All QTL with the IR66215-44-2-3 allele, except that for FLL on chromosome 2, had positive effects on each trait. To confirm the effects of these putative QTL, we developed NILs with the IR64 genetic background by marker-assisted selection. We observed significant differences in several agronomic traits between IR64 and NILs that carried these QTL on chromosomes 2 and 4. Additionally, four IR64-NILs carrying chromosomal segments derived from different NPT varieties on the long arm of chromosome 4 exhibited similar pleiotropic effects for unique agronomic traits. These NILs can be used as research materials for studying each trait and as breeding materials for yield improvement of indica rice cultivars.

  1. The use of 32P Method to Evaluate the Growth of Lowland Rice Cultivated in a System of Rice Intensification (SRI

    Directory of Open Access Journals (Sweden)

    A. Citraresmini

    2013-08-01

    Full Text Available A pot experiment has been conducted to evaluate the growth of the Dyah Suci, a lowland rice variety, in an SRI (System of Rice Intensification planting system. The phosphorus-32 (32P isotope technique was used to evaluate the growth of plants in relation with their phosphorus uptake. The uptake was assumed to vary in the same direction as the growth of the plant. The 32P uptake is assumed to vary in the opposite direction to the plant’s total phosphorus uptake. Here the 32P uptake is expressed in count per minutes (cpm which is then transformed to disintegration per minute (dpm. The results show that, in terms of promoting the plant’s uptake of phosphorus, the SRI planting system is superior to the conventional planting system, and it is manifested in the higher dry weight of straw and grain. From this experiment it is concluded that the 32P method can be used satisfactorily as a tool for explaining the relation between P-uptake and plant growth

  2. Cadmium accumulation in and tolerance of rice (Oryza sativa L.) varieties with different rates of radial oxygen loss

    International Nuclear Information System (INIS)

    Wang, M.Y.; Chen, A.K.; Wong, M.H.; Qiu, R.L.; Cheng, H.; Ye, Z.H.

    2011-01-01

    Cadmium (Cd) uptake and tolerance were investigated among 20 rice cultivars based on a field experiment (1.2 mg Cd kg -1 in soil) and a soil pot trial (control, 100 mg Cd kg -1 ), and rates of radial oxygen loss (ROL) were measured under a deoxygenated solution. Significant differences were found among the cultivars in: (1) brown rice Cd concentrations (0.11-0.29 mg kg -1 ) in a field soil, (2) grain Cd tolerance (34-113%) and concentrations (2.1-6.5 mg kg -1 ) in a pot trial, and (3) rates of ROL (15-31 mmol O 2 kg -1 root d.w. h -1 ). Target hazard quotients were calculated for the field experiment to assess potential Cd risk. Significant negative relationships were found between rates of ROL and concentrations of Cd in brown rice or straw under field and greenhouse conditions, indicating that rice cultivars with higher rates of ROL had higher capacities for limiting the transfer of Cd to rice and straw. - Highlights: → There are significant differences in brown rice Cd concentrations and rates of ROL among the rice cultivars. → The rates of ROL are significantly correlated with concentrations of Cd in brown rice. → Rice cultivars with higher rates of ROL have higher capacities for limiting the transfer of Cd to rice and straw. - Rice cultivars with high rates of ROL tended to accumulate low Cd in grains.

  3. Effects of water-saving irrigation practices and drought resistant rice variety on greenhouse gas emissions from a no-till paddy in the central lowlands of China

    Energy Technology Data Exchange (ETDEWEB)

    Xu, Ying; Ge, Junzhu; Tian, Shaoyang; Li, Shuya [MOA Key Laboratory of Crop Physiology, Ecology and Cultivation (The Middle Reaches of Yangtze River), Huazhong Agricultural University, Wuhan, Hubei 430070 (China); College of Plant Science and Technology, Huazhong Agricultural University, Wuhan 430070 (China); Nguy-Robertson, Anthony L. [Center for Advanced Land Management Information Technologies, School of Natural Resources, University of Nebraska-Lincoln, Lincoln, NE 68583-0973 (United States); Zhan, Ming, E-mail: zhanming@mail.hzau.edu.cn [MOA Key Laboratory of Crop Physiology, Ecology and Cultivation (The Middle Reaches of Yangtze River), Huazhong Agricultural University, Wuhan, Hubei 430070 (China); College of Plant Science and Technology, Huazhong Agricultural University, Wuhan 430070 (China); Cao, Cougui, E-mail: ccgui@mail.hzau.edu.cn [MOA Key Laboratory of Crop Physiology, Ecology and Cultivation (The Middle Reaches of Yangtze River), Huazhong Agricultural University, Wuhan, Hubei 430070 (China); College of Plant Science and Technology, Huazhong Agricultural University, Wuhan 430070 (China)

    2015-02-01

    As pressure on water resources increases, alternative practices to conserve water in paddies have been developed. Few studies have simultaneously examined the effectiveness of different water regimes on conserving water, mitigating greenhouse gases (GHG), and maintaining yields in rice production. This study, which was conducted during the drought of 2013, examined all three factors using a split-plot experiment with two rice varieties in a no-till paddy managed under three different water regimes: 1) continuous flooding (CF), 2) flooded and wet intermittent irrigation (FWI), and 3) flooded and dry intermittent irrigation (FDI). The Methane (CH{sub 4}) and nitrous oxide (N{sub 2}O) emissions were measured using static chamber-gas measurements, and the carbon dioxide (CO{sub 2}) emissions were monitored using a soil CO{sub 2} flux system (LI-8100). Compared with CF, FWI and FDI irrigation strategies reduced CH{sub 4} emissions by 60% and 83%, respectively. In contrast, CO{sub 2} and N{sub 2}O fluxes increased by 65% and 9%, respectively, under FWI watering regime and by 104% and 11%, respectively, under FDI managed plots. Although CO{sub 2} and N{sub 2}O emissions increased, the global warming potential (GWP) and greenhouse gas intensity (GHGI) of all three GHG decreased by up to 25% and 29% (p < 0.01), respectively, using water-saving irrigation strategies. The rice variety also affected yields and GHG emissions in response to different water regimes. The drought-resistance rice variety (HY3) was observed to maintain yields, conserve water, and reduce GHG under the FWI irrigation management compared with the typical variety (FYY299) planted in the region. The FYY299 only had significantly lower GWP and GHGI when the yield was reduced under FDI water regime. In conclusion, FWI irrigation strategy could be an effective option for simultaneously saving water and mitigating GWP without reducing rice yields using drought-resistant rice varieties, such as HY3

  4. Induced micro-mutations in rice - the frequency and spectrum of gamma ray induced height variations in rice variety-Jaya

    International Nuclear Information System (INIS)

    Nair, N.K.; Ninan, C.A.

    1975-01-01

    Seeds of rice variety, Jaya, treated with moderate doses of (10, 20 and 30 kR) gamma rays were subjected to study the relative magnitude of induced variability and the type of mutations induced for height of plant in M 2 and M 3 generations. Progenies of 3352 M 1 spikes, totalling to 35691 M 2 plants and their subsequent progenies in M 3 were analysed. To get wider variability, very large populations in all the generations were studied. The mean value, genetic variance and phenotypic frequency distribution with and between generations were studied. The treated population showed no significant shift in mean values from that of control. The variance was greater in the irradiated material compared to control. The variability was found to shift in both plus and minus direction from that of control with a higher frequency in the minus direction in M 2 . A high frequency of dwarf mutants was observed in 20 kR treated population in the M 2 generation. The segregation ratio was higher in M 2 compared to M 3 generation. (author)

  5. Effect of rice husk biochar application to soil insect diversity on potato cultivation

    Science.gov (United States)

    Meilin, A.; Rubiana, R.

    2018-02-01

    High intensity of disease infection and the intensive use of fertilizers and pesticidescause saturated fertilizer and pesticide to the land. Remediation using biochar rice husk is one of the technology to decrease fertilizer and pesticide residue. The diversity of soil insects can be used as bioindicators because of their existence dependsg on soil structure and condition. This study was aimed to study the diversity and structure communities of soil insect in potatoes on difference husk rice biochar application. The sampling of soil insects was done on potato farmer’s land with four treatments i.e control (farmers’ technique), trichokompos without biochar, trichokompos + biochar with dose 1 ton/ha, and trichokompos + biochar with dose 2 ton / ha. At each point a single pitfall trap was installed for two nights and then it was taken for identification. The results showed that biochar application had significant effect on the number of soil insect species (P = 0.037). The soil insect species composition pattern also showed significant differences between the four treatments (R: 0.2306, Pvalue = 0.001). This mean that the application of biochar affects the number of insects species and plays a role in the formation of soil insect diversity beta patterns.

  6. Nutrient uptake of NPK and result of some rice varieties in tidal land by using combination of organic and inorganic fertilizer

    Science.gov (United States)

    Marlina, Neni; Rompas, Joni Phillep; Marlina, Musbik

    2017-09-01

    Rice planting in tidal land has two main problems: iron (Fe) which has the potential to poison rice and low nutrient availability. Azospirillum enriched chicken manure and phosphate solvent bacteria (Biological Organic Fertilizer = BOF) is an option to overcome iron toxicity and as a source of nutrition. The objective of the study was to obtain a combination of biological organic fertilizers and balanced inorganic fertilizers in reducing doses of inorganic fertilizers, increasing NPK nutrient uptake and yield of several rice varieties in tidal land. This research used Factorial RAK with 25 treatment combinations that were repeated three times. Factor I is a combination of BOF and anorganic fertilizer with 5 levels of treatment (no inorganic fertilizers, BOF 400 kg / ha with inorganic fertilizer 25% NPK, BOF 400 kg / ha with inorganic fertilizer 50% NPK and BOF 400 kg / ha with fertilizer Inorganic 75% NPK). Factor II is several rice varieties (IPB 4S, Martapura, Margasari, Inpara 5, Inpara 7). The results showed that organic fertilizer 400 kg / ha can reduce the use of inorganic fertilizer by 75% of NPK fertilizer. The highest NPK nutrient absorption is in the treatment of organic fertilizer 400 kg / ha and inorganic fertilizer 25% of NPK fertilizer. Production of biological organic fertilizer 400 kg / ha with inorganic fertilizer 25% NPK and 4B IPB varieties 727.77% higher when compared with without the provision of organic fertilizer with Inpara 5 varieties.

  7. The effect of mixed liming and NPK fertilizer to yield of some rice varieties on new openings of acid sulfate tidal swamp land

    Science.gov (United States)

    Akhmad, A.; Dewi, W. S.; Sagiman, S.; Suntoro

    2018-03-01

    The strategies to meet the staple food needs in Indonesia is to open new paddy fields in the sub-optimal land. The research aims to get adaptive rice varieties with the highest yield on new openings of the acid sulfate tidal swamp applying mixed liming and NPK fertilizer. The experiment was conducted in a greenhouse at the Faculty of Agriculture, Tanjungpura University, Pontianak. The trials used a factorial completely randomized block design consisting of two factors. The first factor is a mixture of dolomite with NPK fertilizer, consisting of 3 levels (1 ton/ha dolomite and 60 kg/ha NPK; 2 ton/ha dolomite and 90 kg/ha of NPK, and 3 ton/ha dolomite and 120 kg/ha NPK). The second factor is rice varieties, consisting of 6 levels (Ciherang, Situ Bagendit, Inpara, Mira, Si Randah and Ringkak Janggut). Each treatment replicated four times. The results showed that the application of a mixture of 3 ton/ha dolomite and 120 kg/ha of NPK fertilizer showed the best results to improve rice yield on new opening of the acid sulfate tidal swap. Local rice varieties, Ringkak Janggut, applied 3 ton/ha dolomite and 120 kg/ha NPK fertilizer showed the best result of 1000 seed weight, i.e., 28.19 g, and total grain amount per panicle is 110.75 grains, with the lowest number of empty grains. Local rice varieties Ringkak Janggut potential to be developed as superior varieties on new opening acid sulfate tidal swamps by applying liming and fertilizer.

  8. K concentration in seven rice varieties and two infusions (coffee and tea) determined by 40K-40Ar radioactive decay

    International Nuclear Information System (INIS)

    Navarrete, J.M.; Cabrera, L.; Martinez, T.

    2005-01-01

    As a result of the event occurred in Mexico about 20 years ago, by which milk powder contaminated with 137 CS was imported from an European country after the Chernobyl accident, a legal disposition was set up in the country in order to certify the absence of radioactive contamination by gamma emitters, performing gamma spectroscopy to every foodstuff sample either imported or to be exported. In this process is always detected the X rays (1461 KeV) natural radiation emitted by 11% of 40 K nucleus decaying to 40 Ar by EC. So, when the counts accumulated during a detection time from 12 to 24 hours in a low background scintillation detection system are expressed as cps, corrected for background and divided by the sample weight (g), detection efficiency (%), decay yielding (0.11) and constant specific activity of elementary K(31.19 Bq/gK), the K concentration in the sample .is obtained. This paper reports the results found in seven rice varieties and two more vegetables, coffee and tea, including the K fractions passing to infusions, as well as are discussed similarities and differences related to K concentration and the advantages of the method.

  9. Genotypic Differences in Growth and Physiological Responses to Transplanting and Direct Seeding Cultivation in Rice

    Directory of Open Access Journals (Sweden)

    Song Chen

    2009-06-01

    Full Text Available The field experiments were conducted to investigate the growth and physiological responses of six super hybrid rice combinations to two planting methods, transplanting (TP and direct seeding (DS during 2006–2007 and 2007–2008. The 1000-grain weight and number of tillers per plant at the early growth stage, the maximum quantum yield of PSII (Fv/Fm and transpiration rate (Tr were higher in DS plants than in TP ones, whereas the grain yield, number of panicles per square meter, seed setting rate, net photosynthetic rate (Pn and stomatal conductance were lower in DS plants. However, little difference was detected in number of grains per panicle, stem (shoot and leaf weight between the combinations in the two planting methods. The responses of plant growth and physiological traits to planting method differed greatly among the six combinations. In both planting methods, Chouyou 58 and Yongyou 6 had the highest and lowest panicle biomass and Pn, respectively. The higher yield of Chunyou 58 was associated with more numbers of panicles per square meter and grains per panicle in both planting methods. The results indicate that lower grain yield in DS relative to TP is attributed to more excessive tillers at the early stage, lower leaf biomass and photosynthetic rate at the late stage.

  10. Bran data of total flavonoid and total phenolic contents, oxygen radical absorbance capacity, and profiles of proanthocyanidins and whole grain physical traits of 32 red and purple rice varieties

    Directory of Open Access Journals (Sweden)

    Ming-Hsuan Chen

    2016-09-01

    Full Text Available Phytochemicals in red and purple bran rice have potential health benefit to humans. We determined the phytochemicals in brans of 32 red and purple global rice varieties. The description of the origin and physical traits of the whole grain (color, length, width, thickness and 100-kernel weight of this germplasm collection are provided along with data of total flavonoid and total phenolic contents, oxygen radical absorbance capacity and total proanthocyanidin contents. The contents and proportions of individual oligomers, from degree of polymerization of monomers to 14-mers, and polymers in bran of these 32 rice varieties are presented (DOI: http://dx.doi.org/10.1016/j.foodchem.2016.04.004 [1]. Keywords: Purple rice, Red rice, Black rice, Proanthocyanidins, Tannins, Flavonoids, Rice bran

  11. Assessment of arsenic in Australian grown and imported rice varieties on sale in Australia and potential links with irrigation practises and soil geochemistry.

    Science.gov (United States)

    Fransisca, Yunnita; Small, Darryl M; Morrison, Paul D; Spencer, Michelle J S; Ball, Andrew S; Jones, Oliver A H

    2015-11-01

    Chronic dietary exposure to arsenic, particularly the inorganic forms (defined as elemental arsenic, predominantly As(3+) and As(5+), and all its inorganic compounds except arsine), is a matter of concern for human health. Ingestion of arsenic usually occurs via contaminated water but recent studies show there is also a risk of exposure from food, particularly Asian rice (Oryza sativa). Australia is a rice growing country, contributing around 2% of the world rice trade, and a large proportion of the population consumes rice regularly. In the present study we investigated concentrations of arsenic in both Australian grown and imported rice on sale in Australia and examined the potential links with irrigation practises and soil geochemistry. The results indicated a wide spread of arsenic levels of 0.09-0.33 mg kg(-1), with Australian grown Arborio and sushi varieties of O. sativa containing the highest mean value of ∼0.22 mg kg(-1). Arsenic levels in all samples were below the 1 mg kg(-1) limit set by Food Standards Australia New Zealand. Copyright © 2014 Elsevier Ltd. All rights reserved.

  12. The influence of plant spacing in the early stages of selection of rice (Oryza sativa L.) varieties

    Energy Technology Data Exchange (ETDEWEB)

    Torró, I.; Bretó, P.; García-Yzaguirre, A.

    2016-11-01

    The cultural practices of the early generations in a pedigree breeding programme may influence its success. The main objective of this study was to compare two selection environments in rice: Widely spaced planting in the field and dense planting in concrete basins. Both methods had yielded commercial varieties in the past. Two F2 populations (J and MS), derived from two crosses sharing the same female parent, were transplanted to both environments. Phenotypic traits were evaluated and their narrow sense heritabilities (h2) estimated in the F3 and in the F4 progenies of selected plants, all grown in the field. Growth potential was more apparent in the field for most traits, especially those related to yield, but broad sense heritabilities were higher in the basins for ten traits, being higher in the field for the other five. In population F2MS, field selection resulted in F3 plants which retained a higher tillering ability than those derived from basins selection. Most traits showed low h2 values: Additive variance was only relevant in panicle length (in both populations), plant height and mean panicle weight (in the J population). However, response to one generation of selection (from F3 to F4) also showed fixable variation in panicle number. In addition, this selection reduced plant height, increased culm diameter and internode length (in both populations), and improved pulling resistance (against lodging) in population J. It may be concluded that both practices can be used for selection in the F2, although different responses might be expected in yield related traits. (Author)

  13. Determination of Optimal Harvest Time of Chuchung Variety Green Rice(®) (Oryza sativa L.) with High Contents of GABA, γ-Oryzanol, and α-Tocopherol.

    Science.gov (United States)

    Kim, Hoon; Kim, Oui-Woung; Ha, Ae Wha; Park, Soojin

    2016-06-01

    In our previous study, an early-maturing variety of rice (Oryza sativa L.), Jinbu can have feature with unique green color, various phytochemicals as well as nutritive components by the optimal early harvesting, called Green Rice(®) (GR). The aims of the present field experiments were to evaluate the changes in the weight of 1,000 kernels, yield, and contents of proximate and bioactive compounds in Chuchung, a mid-late maturing variety, during the pre-harvest maturation of rough rice and to research the appropriate harvest time and potent bioactivity of Chuchung GR. The weights of 1,000 kernels of Chuchung GR dramatically increased until 27 days after heading (DAH). The yields of Chuchung GR declined after 27 DAH and significantly declined to 0.0% after 45 DAH. The caloric value and total mineral contents were higher in the GR than in the full ripe stage, the brown rice (BR). In the GR, the contents of bioactive compounds, such as γ-aminobutyric acid, γ-oryzanol, and α-tocopherol, were much higher (P<0.05) than those in the BR, specifically during 24~27 DAH. Therefore, bioactive Chuchung GR can be produced with a reasonable yield at 24~27 DAH and it could be useful for applications in various nutritive and functional food products.

  14. Determination of Optimal Harvest Time of Chuchung Variety Green Rice® (Oryza sativa L.) with High Contents of GABA, γ-Oryzanol, and α-Tocopherol

    Science.gov (United States)

    Kim, Hoon; Kim, Oui-Woung; Ha, Ae Wha; Park, Soojin

    2016-01-01

    In our previous study, an early-maturing variety of rice (Oryza sativa L.), Jinbu can have feature with unique green color, various phytochemicals as well as nutritive components by the optimal early harvesting, called Green Rice® (GR). The aims of the present field experiments were to evaluate the changes in the weight of 1,000 kernels, yield, and contents of proximate and bioactive compounds in Chuchung, a mid-late maturing variety, during the pre-harvest maturation of rough rice and to research the appropriate harvest time and potent bioactivity of Chuchung GR. The weights of 1,000 kernels of Chuchung GR dramatically increased until 27 days after heading (DAH). The yields of Chuchung GR declined after 27 DAH and significantly declined to 0.0% after 45 DAH. The caloric value and total mineral contents were higher in the GR than in the full ripe stage, the brown rice (BR). In the GR, the contents of bioactive compounds, such as γ-aminobutyric acid, γ-oryzanol, and α-tocopherol, were much higher (P<0.05) than those in the BR, specifically during 24~27 DAH. Therefore, bioactive Chuchung GR can be produced with a reasonable yield at 24~27 DAH and it could be useful for applications in various nutritive and functional food products. PMID:27390725

  15. Understanding the evolution of rice technology in China - from traditional agriculture to GM rice today.

    Science.gov (United States)

    Shen, Xiaobai

    2010-01-01

    This paper provides an historical survey of the evolution of rice technology in China, from the traditional farming system to genetically modified rice today. Using sociotechnological analytical framework, it analyses rice technology as a socio-technical ensemble - a complex interaction of material and social elements, and discusses the specificity of technology development and its socio-technical outcomes. It points to two imperatives in rice variety development: wholesale transporting agricultural technology and social mechanism to developing countries are likely lead to negative consequences; indigenous innovation including deploying GM technology for seed varietal development and capturing/cultivating local knowledge will provide better solutions.

  16. Evolution of rice and pulse varieties with improved quality through induced mutations. Part of a coordinated programme on the use of nuclear techniques for seed protein improvement

    International Nuclear Information System (INIS)

    Mia, M.M.

    1980-03-01

    Three mutant varieties, 16 hybrids of advanced generation, 6 recommended varieties and many local collections of rice in Bangladesh were screened for protein content. The 25 varieties or strains showed a variation of protein content between 8.9 - 11.7% and also wide ranges of variation in amylose content, starch-iodine-blue value and water absorption by grain. Amino acid compositions of some promising varieties were also investigated. 60 rice germplasms tested also showed a wide range of variation in protein content (6-13%) and variations of other seed characteristics. 3000 local collections showed a variation range of 5-13% protein content. Mutation breedings were carried out on chickpeas and lentils on a large scale. Dry seed was treated with 60 Co gamma ray and mutants were detected, selected, particularly for high protein content, and evaluated in M 2 -M 8 generations. Of the 10 selected mutant lines of each of the pulses, variations of various agronomic characters were observed. However, induced variation in protein content was only remarkable in chickpea. The most promising chickpea mutant showed 19% higher yield and 12% higher protein content than the mother variety, and was proposed to be released as a variety

  17. Grain Yield, Dry Weight and Phosphorus Accumulation and Translocation in Two Rice (Oryza sativa L. Varieties as Affected by Salt-Alkali and Phosphorus

    Directory of Open Access Journals (Sweden)

    Zhijie Tian

    2017-08-01

    Full Text Available Salt-alkali is the main threat to global crop production. The functioning of phosphorus (P in alleviating damage to crops from saline-alkaline stress may be dependent on the variety of crop but there is little published research on the topic. This pot experiment was conducted to study if P has any effect on rice (Oryza sativa L. yield, dry matter and P accumulation and translocation in salt-alkaline soils. Plant dry weight and P content at heading and harvest stages of two contrasting saline-alkaline tolerant (Dongdao-4 and sensitive (Tongyu-315 rice varieties were examined under two saline-alkaline (light versus severe soils and five P supplements (P0, P50, P100, P150 and P200 kg ha−1. The results were: in light saline-alkaline soil, the optimal P levels were found for P150 for Dongdao-4 and for P100 for Tongyu-315 with the greatest grain dry weight and P content. Two rice varieties obtained relatively higher dry weight and P accumulation and translocation in P0. In severe saline-alkaline soil, however, dry weight and P accumulation and translocation, 1000-grain weight, seed-setting rate and grain yield significantly decreased, but effectively increased with P application for Dongdao-4. Tongyu-315 showed lower sensitivity to P nutrition. Thus, a more tolerant variety could have a stronger capacity to absorb and translocate P for grain filling, especially in severe salt-alkaline soils. This should be helpful for consideration in rice breeding and deciding a reasonable P application in saline-alkaline soil.

  18. Effect of nano packaging on preservation quality of Nanjing 9108 rice variety at high temperature and humidity.

    Science.gov (United States)

    Wang, Fan; Hu, Qiuhui; Mugambi Mariga, Alfred; Cao, Chongjiang; Yang, Wenjian

    2018-01-15

    A nano packaging material containing nano Ag, nano TiO 2 , nano attapulgite and SiO 2 was prepared, and its impact on quality of Nanjing 9108 rice at 37°C and 85% relative humidity was studied. Effects of the packaging on ambient gases and chromatic aberration of rice were determined. Moreover, oxidation level, molds growth and flavor of rice were also analyzed. Results showed that nano packaging material had antimicrobial effects and maintained low O 2 and high CO 2 content in the packages. The packages thereby inhibited the growth of molds and the production of fatty acids, restrained the increase of lipase activity, and reduced the oxidation of fats and proteins. As a result, the production of yellow and white-belly rice were inhibited. Furthermore, the color and flavor of rice were maintained. Therefore, the nano-packing material could be applied for preservation of rice to improve preservation quality. Copyright © 2017 Elsevier Ltd. All rights reserved.

  19. Five willow varieties cultivated across diverse field environments reveal stem density variation associated with high tension wood abundance

    Directory of Open Access Journals (Sweden)

    Nicolas eBerthod

    2015-10-01

    Full Text Available Sustainable and inexpensive production of biomass is necessary to make biofuel production feasible, but represents a challenge. Five short rotation coppice (SRC willow cultivars, selected for high biomass yield, were cultivated on sites at four diverse regions of Quebec to determine their bioenergy potential in contrasting environments. Wood composition and anatomical traits were characterized. Tree height and stem diameter were measured to evaluate growth performance of the cultivars according to the diverse pedoclimatic conditions. Each cultivar showed very specific responses to its environment. While no significant variation in lignin content was observed between sites, there was variation between cultivars. Surprisingly, the pattern of substantial genotype variability in stem density was maintained across all sites. However, wood anatomy did differ between sites in a cultivar (producing high and low density wood, suggesting a probable response to an abiotic stress. Furthermore, twice as many cellulose-rich G-fibers, comprising over 50 % of secondary xylem, were also found in the high density wood, a finding with potential to bring higher value to the lignocellulosic bioethanol industry

  20. Effect of organic fertiliser residues from rice production on nitrogen fixation of soya (Glycine max L. Merrill, Chiang Mai 60 variety

    Directory of Open Access Journals (Sweden)

    Nattida Luangmaka

    2013-09-01

    Full Text Available A field study was undertaken on the residual effect of organic fertilisers applied to the preceding rice cropping on nitrogen fixation of soya in a rice-soya cropping system. The experiment was conducted on a farmer’s lowland paddy in Mae Rim district, Chiang Mai province, Thailand. Organic fertiliser treatments assigned were: 1 control (no fertiliser, 2 animal manure of cattle (AM, 3 compost (CP, 4 azolla (AZ, 5 AM + CP, 6 AM + AZ, 7 CP + AZ and 8 AM + CP + AZ. Soya seeds were planted without rhizobial inoculation in December 2011, four months after the application of organic fertilisers. Nodule weight, total shoot nitrogen accumulation and relative ureide index at various growth stages were recorded as the indices of nitrogen fixation. Results of the study demonstrate that the residues from the application the organic fertilisers of narrow C/N ratios during the land preparation for rice cropping four months before soya cultivation promoted nitrogen fixation by native rhizobia.

  1. Characterization of N2-fixing plant growth promoting endophytic and epiphytic bacterial community of Indian cultivated and wild rice (Oryza spp.) genotypes.

    Science.gov (United States)

    Banik, Avishek; Mukhopadhaya, Subhra Kanti; Dangar, Tushar Kanti

    2016-03-01

    The diversity of endophytic and epiphytic diazotrophs in different parts of rice plants has specificity to the niche (i.e. leaf, stem and root) of different genotypes and nutrient availability of the organ. Inoculation of the indigenous, polyvalent diazotrophs can facilitate and sustain production of non-leguminous crops like rice. Therefore, N2-fixing plant growth promoting bacteria (PGPB) were isolated from different parts of three Indian cultivated [Oryza sativa L. var. Sabita (semi deep/deep water)/Swarna (rain fed shallow lowland)/Swarna-Sub1(submergence tolerant)] and a wild (O. eichingeri) rice genotypes which respond differentially to nitrogenous fertilizers. Thirty-five isolates from four rice genotypes were categorized based on acetylene reduction assay on nitrogenase activity, biochemical tests, BIOLOG and 16S rRNA gene sequencing. The bacteria produced 9.36-155.83 nmole C2H4 mg(-1) dry bacteria h(-1) and among them nitrogenase activity of 11 potent isolates was complemented by nifH-sequence analysis. Phylogenetic analysis based on 16S rDNA sequencing divided them into five groups (shared 95-100 % sequence homology with type strains) belonging to five classes-alpha (Ancylobacter, Azorhizobium, Azospirillum, Rhizobium, Bradyrhizobium, Sinorhizobium, Novosphingobium, spp.), beta (Burkholderia sp.), gamma (Acinetobacter, Aeromonas, Azotobacter, Enterobacter, Klebsiella, Pantoea, Pseudomonas, Stenotrophomonas spp.) Proteobacteria, Bacilli (Bacillus, Paenibacillus spp.) and Actinobacteria (Microbacterium sp.). Besides, all bacterial strains possessed the intrinsic PGP traits of like indole (0.44-7.4 µg ml(-1)), ammonia (0.18-6 mmol ml(-1)), nitrite (0.01-3.4 mol ml(-1)), and siderophore (from 0.16-0.57 μmol ml(-1)) production. Inoculation of rice (cv. Swarna) seedlings with selected isolates had a positive impact on plant growth parameters like shoot and root elongation which was correlated with in vitro PGP attributes. The results indicated that the

  2. Cadmium accumulation in and tolerance of rice (Oryza sativa L.) varieties with different rates of radial oxygen loss.

    Science.gov (United States)

    Wang, M Y; Chen, A K; Wong, M H; Qiu, R L; Cheng, H; Ye, Z H

    2011-06-01

    Cadmium (Cd) uptake and tolerance were investigated among 20 rice cultivars based on a field experiment (1.2 mg Cd kg⁻¹ in soil) and a soil pot trial (control, 100 mg Cd kg⁻¹), and rates of radial oxygen loss (ROL) were measured under a deoxygenated solution. Significant differences were found among the cultivars in: (1) brown rice Cd concentrations (0.11-0.29 mg kg⁻¹) in a field soil, (2) grain Cd tolerance (34-113%) and concentrations (2.1-6.5 mg kg⁻¹) in a pot trial, and (3) rates of ROL (15-31 mmol O₂ kg⁻¹ root d.w. h⁻¹). Target hazard quotients were calculated for the field experiment to assess potential Cd risk. Significant negative relationships were found between rates of ROL and concentrations of Cd in brown rice or straw under field and greenhouse conditions, indicating that rice cultivars with higher rates of ROL had higher capacities for limiting the transfer of Cd to rice and straw. Copyright © 2011 Elsevier Ltd. All rights reserved.

  3. Conventional steaming retains tocols and γ-oryzanol better than boiling and frying in the jasmine rice variety Khao dok mali 105.

    Science.gov (United States)

    Srichamnong, Warangkana; Thiyajai, Parunya; Charoenkiatkul, Somsri

    2016-01-15

    The aim of this study was to determine the effect of various cooking methods on the white rice (WR), brown rice (BR) and parboiled geminated brown rice (PGBR) of the same variety, focusing on γ-oryzanol and tocols. The methods used for analysis of γ-oryzanol and tocols included solvent extraction and HPLC. The results indicated that PGBR had a higher content of γ-oryzanol and tocols compared to BR and WR, when different cooking methods (raw, steamed, boiled and fried) were used. Steaming method retained the higher γ-oryzanol content (53.6-62.2mg/100g) in both PGBR and BR, in comparison with boiling (53.0-60.6mg/100g) and frying (23.4-31.5mg/100g) methods. Frying reduced the γ-oryzanol content significantly regardless of the rice type. Regarding tocols, a similar trend was noticed in all the methods studied. Tocotrienol was the most abundant tocol found in PGBR and BR. Therefore, steaming is the best cooking method to preserved most of the bioactive compounds; however, a slight increase in total tocols was observed after frying. Copyright © 2015 Elsevier Ltd. All rights reserved.

  4. Dwarf Rice Mutant Derived from 0.2 kGy Gamma Rays Irradiated Seeds of Atomita 4 Variety

    International Nuclear Information System (INIS)

    Sobrizal; Sutisna Sanjaya; Carkum; Mohamad Ismachin

    2004-01-01

    Dwarf rice mutant was obtained when Atomita 4 seeds were irradiated by 0.2 kGy gamma rays. The results of segregation analyses in F2 populations and F3 lines derived from reciprocal crosses of mutant and Atomita 4 suggested that the dwarf was controlled by a single recessive gene. This gene was not located on rice cytoplasmic genome but on nuclear genome. The gene for dwarf obtained in this study tentatively could be assumed as a new finding until the allelic relationships with other dwarf genes are verified. (author)

  5. Oil fatty acid composition of eighteen Mediterranean olive varieties cultivated under the arid conditions of Boughrara (southern Tunisia

    Directory of Open Access Journals (Sweden)

    Zarrouk, Mokhtar

    2009-12-01

    Full Text Available In this study, eighteen olive varieties, originating from Spain, France, Italy, Greece and Algeria, and maintained at the olive experimental station of Boughrara (arid region of Tunisia were evaluated for their oil yield and fatty acid composition. The analysis of variance revealed significant differences among varieties for all traits (p En este estudio, dieciocho variedades de aceituna procedentes de España, de Francia, de Italia, de Grecia y de Argelia, cultivadas en la estación experimental del olivo de Boughrara (región árida de Túnez, fueron evaluadas para el rendimiento en aceite y la composición de ácidos grasos. El análisis de la varianza mostró diferencias significativas entre todas las variedades (p < 0.01. El análisis de “clusters” jerárquico clasificó las variedades en tres grandes grupos. El primer grupo incluía un subgrupo compuesto por siete variedades de aceituna Changlot Real, Koroneiki, Verdial de Vélez- Málaga, Coratina, Lechín de Granada, Cornezuelo y Leccino, que se caracterizan por su alto rendimiento en aceite, alto contenido en oleico y bajo contenido en ácidos palmítico y linoleico. Las composiciones de ácidos grasos de aceites provenientes de estas variedades se conforman con estándares internacionales y son mejores si las comparamos con la de Chemlali (el cultivo más abundante en Túnez. Finalmente, los ácidos grasos mayoritarios (palmítico (C16:0, oleico (C18:1 y linoleico (C18:2 de nueve de los aceites de oliva virgen estudiados fueron comparados con los de las mismas variedades cultivadas en sus áreas originarias. A excepción de los aceites Koroneiki y Olivière que mostraron una composición de ácidos grasos inalterable y del aceite Cornezuelo en el que se observó un aumento del nivel de ácido oleico y un descenso del nivel de ácido linoleico, la mayoría de los aceites mostró disminución de ácido oleico y aumento de los porcentajes de ácido palmítico y linoleico, compar

  6. Comparison of Antioxidant Properties of Wild Blueberries (Vaccinium arctostaphylos L. and Vaccinium myrtillus L. with Cultivated Blueberry Varieties (Vaccinium corymbosum L. in Artvin Region of Turkey

    Directory of Open Access Journals (Sweden)

    Özlem Saral

    2014-09-01

    Full Text Available Vaccinium arctostaphylos L. and Vaccinium myrtillus L. which are found naturally in most part of Blacksea Region, and Artvin are generally called bear grape, Trabzon tea, and likapa. In addition, different varieties of blueberry (Vaccinium corymbosum L. have been cultivated in Artvin region for 5 or 6 years. Blueberries contain appreciable levels of phenolic compounds, including anthocyanins and flavonols that have high biological activity. V. arctostaphylos and V. myrtillus show that natural distrubition with received V. corymbosum of different cultured species in Artvin region will be determined antioxidant activity in this study. In this study showed that wild species had a higher antioxidant effect than cultivated species. V. myrtillus had high total polyphenols (11.539-20.742 mg GAE/g dry sample, flavonoids (1.182-2.676 mg QE/g dry sample and anthocyanins (3.305-11.473 mg Cyn/g dry sample than V. corymbosum species. In addition, wild species had high CUPRAC, FRAP and DPPH values. The antioxidant activities found with CUPRAC, expressed as trolox equivalent antioxidant capacity ranged from 0.143 to 0.297 mmol TEAC/g dry sample. Those determined with DPPH expressed as IC50 ranged from 0.229 to 1.178 mg/ml. Those determined with FRAP expressed as FeSO4.7H2O equivalent were in 130.719–346.115 µmol Fe/g dry sample range.

  7. Detection of genetic variability in Basmati and non-Basmati rice varieties and their radiation induced mutants through random amplified polymorphic DNA (RAPD)

    Energy Technology Data Exchange (ETDEWEB)

    Farooq, S; Iqbal, N; Arif, M [Nuclear Institute for Agriculture and Biology (NIAB), Faisalabad (Pakistan)

    1998-03-01

    Random Amplified Polymorphic DNA (RAPDs) markers were utilized to detect polymorphism between pure lines and commercially available Basmati rice varieties to assess variation which may be helpful in quality control and varietal identification (Basmati-370 and derived radiation induced mutants), differentiation of mutants and parents, and identification of RAPD markers co-segregating with important agronomic traits including plant height, days to flower and grain quality. Basmati varieties were distinguished from non-Basmati varieties with the help of five diagnostic markers which will be useful for detecting mixing of non-Basmati and Basmati rices, currently a serious marketing problem. Different Basmati cultivars were identified with the help of diagnostic RAPD markers which can be used in quality control as well as for ``fingerprinting`` of cultivars. Different radiation induced mutants were also successfully distinguished from the parents on the basis of variety specific and mutant specific markers which will be useful for varietal identification. In addition to this, other markers were also identified which can differentiate mutants from each other and are being, used for the fingerprinting of different mutants, particularly the dwarf mutants having similar appearance but different parentage. For identification of RAPD markers co-segregating with plant height and days to flower, 50 F{sub 2} plants and four F{sub 3} families were studied from a reciprocal cross made between Kashmir Basmati (tall and early) and Basmati-198 (dwarf and late). Segregating bands were observed within these populations, and indicating the possible use of RAPD markers for tagging gene(s) of agronomic importance in rice. (author). 38 refs, 6 figs, 3 tabs.

  8. Detection of genetic variability in Basmati and non-Basmati rice varieties and their radiation induced mutants through random amplified polymorphic DNA (RAPD)

    International Nuclear Information System (INIS)

    Farooq, S.; Iqbal, N.; Arif, M.

    1998-01-01

    Random Amplified Polymorphic DNA (RAPDs) markers were utilized to detect polymorphism between pure lines and commercially available Basmati rice varieties to assess variation which may be helpful in quality control and varietal identification (Basmati-370 and derived radiation induced mutants), differentiation of mutants and parents, and identification of RAPD markers co-segregating with important agronomic traits including plant height, days to flower and grain quality. Basmati varieties were distinguished from non-Basmati varieties with the help of five diagnostic markers which will be useful for detecting mixing of non-Basmati and Basmati rices, currently a serious marketing problem. Different Basmati cultivars were identified with the help of diagnostic RAPD markers which can be used in quality control as well as for ''fingerprinting'' of cultivars. Different radiation induced mutants were also successfully distinguished from the parents on the basis of variety specific and mutant specific markers which will be useful for varietal identification. In addition to this, other markers were also identified which can differentiate mutants from each other and are being, used for the fingerprinting of different mutants, particularly the dwarf mutants having similar appearance but different parentage. For identification of RAPD markers co-segregating with plant height and days to flower, 50 F 2 plants and four F 3 families were studied from a reciprocal cross made between Kashmir Basmati (tall and early) and Basmati-198 (dwarf and late). Segregating bands were observed within these populations, and indicating the possible use of RAPD markers for tagging gene(s) of agronomic importance in rice. (author)

  9. Quantitative and qualitative damage caused by Oebalus poecilus (Hemiptera, Pentatomidae to upland rice cultivated in new agricultural frontier of the Amazon rainforest (Brazil

    Directory of Open Access Journals (Sweden)

    Diones Krinski

    Full Text Available ABSTRACT Oebalus poecilus (Dallas 1851 is one of the stink bug species of great economic importance for rice producers in Brazil of irrigated, flood and upland cropping systems. These pentatomids are known as stink bugs of panicles, because both nymphs and adults feed mainly on panicles. Stink bug attacks result in pecky (spots seeds, lower mass, germinative reduction and deformed grains. Bearing these factors in mind, the aim of this study was to evaluate the quantitative and qualitative losses in commercial cultivars of upland rice (Cambará variety, submitted to different population levels of stink bugs of panicles, O. poecilus, at different reproductive growth stages. The results show that in upland rice (Cambará variety, the rice grains are susceptible to quantitative (number and weight and qualitative (pecky, atrophy, chalky and broken grains damage during all panicle development. However, when the insects feed during anthesis/caryopsis and milky stage cause significantly greater percentage of empty grains (up to 83% than when they feed of grains during later phases of panicle development. This characteristic was also observed for the reduction in grain weight. This information may benefit producers and other researchers, allowing them to focus on the monitoring efforts of O. poecilus in most susceptible phases of the attack of this insect. This will enable decision-making about what control measures should be taken, and when, in order to control stink bugs of panicles.

  10. Evaluation of the tolerance to Finale® in the germination and regeneration of Cuban rice varieties (IACuba-17 and IACuba-19

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    Daymí Abreu

    2005-01-01

    Full Text Available Selection agent used during the shoot selection has an important role on the transgenic plant generation efficiency. In this work, the tolerance to the herbicide Finale® in two Cuban rice cultivars, IACuba17 and IACuba-19 was evaluated, and determined that 10 days exposure to 5 and 10 mg.l-1 of Finale® were enough to avoid seedlings of IAC-17 and IAC-19, respectively. Cultivated calluses (0, 2, 4 and 6 days in the absence of Finale®in the regeneration medium were used to evaluate the minimal concentration of Finale®that totally inhibits shoot regeneration. Pre-induced calluses cultured during two days and 3 mg.l-1 of Finale® in the regeneration medium was the most efficient combination to select shoots during the generation of transgenic plants resistant to the herbicide. Our shoot selection procedure reduces to 3 weeks the time to obtain shoots during the generation of transgenic rice plants. Key words: germination, mature seeds, Oryza, phosphinothricin, regeneration, selection markers

  11. Effect of methyl salicylate (MeSA), an elicitor on growth, physiology and pathology of resistant and susceptible rice varieties.

    Science.gov (United States)

    Kalaivani, Kandaswamy; Kalaiselvi, Marimuthu Maruthi; Senthil-Nathan, Sengottayan

    2016-10-11

    Methyl salicylate (MeSA) is a volatile organic compound synthesized from salicylic acid (SA) a plant hormone that helps to fight against plant disease. Seed treatment with MeSA, is an encouraging method to the seed industry to produce more growth and yield. The aim of our study is to find out the growth, development and disease tolerance of rice seed treated with different concentrations of MeSA. Also the seed treatments were studied to determine whether they directly influenced seedling emergence and growth in rice (Oryza sativa L) cultivars 'IR 20, IR 50, IR 64, ASD 16, ASD 19 and ADT 46' under greenhouse condition. MeSA seed treatments at 25, 50, 75 and 100 mg/L significantly increased seedling emergence. Effects were stronger in IR 50, and IR 64 and the effects were dose dependent, although the relationship between dose and effect was not always linear. MeSA seed treated rice plant against bacterial blight were analyzed. Bacterial blight was more effectively controlled by the seed treated with 100 mg/L than others. These results suggest that seed treatment with MeSA alters plant physiology in ways that may be useful for crop production as well as protection.

  12. Effect Of Agrotechnical Measures And Varieties On Seasonal Dynamics Of Tetranychus Urticae Koch (Acari, Trombidiformes, Tetranychidae On High Tunnel-Cultivated Garden Strawberries

    Directory of Open Access Journals (Sweden)

    Salmane Ineta

    2015-04-01

    Full Text Available The aim of the present study was to determine the seasonal pattern of two-spotted spider mite Tetranychus urticae on strawberries cultivated in polythene-covered high tunnels in temperate climatic conditions. Various cultivars were used and the effect of modification of plant covering indices on abundance and incidence of these mites was also tested. The number of two-spotted spider mites was relatively low at the beginning of the vegetation season and started to increase when average air temperature rose above 20 to 25 °C. In the experiment two types of tunnels differing in additional plant cover were used. The maximum mite abundance did not significantly vary between varieties in tunnel 1 conditions, but it was significantly lower for variety 'Sonata' in tunnel 2 conditions. Mite numbers significantly declined after strawberry foliage mowing and removal of polythene cover. Mite development was prolonged in tunnel 1, where additional cover of plants was used and higher early season air temperature was recorded in comparison to tunnel 2. It was concluded that increase in early season temperature can increase two-spotted spider mite abundance and have a more negative effect on strawberry plants in respect of foliage damage by mites.

  13. Improvement of Salinity Stress Tolerance in Rice: Challenges and Opportunities

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    Thi My Linh Hoang

    2016-10-01

    Full Text Available Rice (Oryza sativa L. is an important staple crop that feeds more than one half of the world’s population and is the model system for monocotyledonous plants. However, rice is very sensitive to salinity and is the most salt sensitive cereal crop with a threshold of 3 dSm−1 for most cultivated varieties. Despite many attempts using different strategies to improve salinity tolerance in rice, the achievements so far are quite modest. This review aims to discuss challenges that hinder the improvement of salinity stress tolerance in rice as well as potential opportunities for enhancing salinity stress tolerance in this important crop.

  14. Molecular and Functional Characterization of GR2-R1 Event Based Backcross Derived Lines of Golden Rice in the Genetic Background of a Mega Rice Variety Swarna.

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    Haritha Bollinedi

    Full Text Available Homozygous Golden Rice lines developed in the background of Swarna through marker assisted backcross breeding (MABB using transgenic GR2-R1 event as a donor for the provitamin A trait have high levels of provitamin A (up to 20 ppm but are dwarf with pale green leaves and drastically reduced panicle size, grain number and yield as compared to the recurrent parent, Swarna. In this study, we carried out detailed morphological, biochemical and molecular characterization of these lines in a quest to identify the probable reasons for their abnormal phenotype. Nucleotide blast analysis with the primer sequences used to amplify the transgene revealed that the integration of transgene disrupted the native OsAux1 gene, which codes for an auxin transmembrane transporter protein. Real time expression analysis of the transgenes (ZmPsy and CrtI driven by endosperm-specific promoter revealed the leaky expression of the transgene in the vegetative tissues. We propose that the disruption of OsAux1 disturbed the fine balance of plant growth regulators viz., auxins, gibberellic acid and abscisic acid, leading to the abnormalities in the growth and development of the lines homozygous for the transgene. The study demonstrates the conserved roles of OsAux1 gene in rice and Arabidopsis.

  15. Yield, fruit quality, contents and sensory quality of old apple varieties trained as slender spindle under organic and integrated cultivation conditions

    Science.gov (United States)

    Wurm, Lothar; Gössinger, Manfred; Wendelin, Silvia; Martina, Kieler; Thomas, Rühmer; Walter, Brandes; Kathrin, Sigl

    2015-04-01

    Between 2006 and 2013 the old apple varieties 'Ananas Reinette', 'llzer Rosenapfel', 'Kronprinz Rudolf', 'Steirischer Maschanzker', 'Goldparmäne', 'Roter Boskoop', 'Ribston Pepping', 'Steirische Schafnase', 'Winterbananenapfel', 'Lavanttaler Bananenapfel', 'Himbeerapfel' and 'Florianer Rosmarin' (from 2009 on also 'Roter Berlepsch', 'Cox Orange' and 'Kanada Reinette') were tested for their fresh market suitability at the experimental orchard Haschhof of the HBLA and BA für Wein- und Obstbau Klosterneuburg under organic and integrated cultivation (IP) conditions trained as slender spindle. In 2010 the effect of an organic and a combined "integrated-organic summer" plant protection strategie on fruit quality and pesticide residues was tested in addition. No pesticide residues were detected in fruits of both plant protection strategies, expect on fruits of "integrated-organic summer" Schafnase in 2010. At harvest 2010 the bio-variant showed a significantly higher percentage of fruits with skin defects. The losses due to parasitic diseases during storage were strongly depending on the cultivar, but hardly affected by the plant protection strategy in this year. Looking at the entire experimental period, most of the varieties in the organic plot showed a comparable fruiting performance as those in the IP plot. The best fruiting performances were found with 'Winterbananenapfel', 'Roter Boskoop' and 'Kronprinz Rudolf', while the cumulative yield of 'Florianer Rosmarin', 'Himbeerapfel' and 'Lavanttaler Bananenapfel' remained below average. With respect to external fruit quality and storability 'Winterbananenapfel', 'Steirischer Maschanzker', 'Roter Boskoop', 'Kronprinz Rudolf' and 'Ilzer Rosenapfel' showed comparatively good results. With 'Ananas Reinette' the significantly lowest total phenolics contents were determined. 'Kanada Reinette', 'Roter Boskoop' and 'Ananas Reinette' showed a high acidity. High contents of soluble solids were found with 'Goldparmäne', 'Roter

  16. Water management practices affect arsenic and cadmium accumulation in rice grains.

    Science.gov (United States)

    Sun, Liming; Zheng, Manman; Liu, Hongyan; Peng, Shaobing; Huang, Jianliang; Cui, Kehui; Nie, Lixiao

    2014-01-01

    Cadmium (Cd) and arsenic (As) accumulation in rice grains is a great threat to its productivity, grain quality, and thus human health. Pot and field studies were carried out to unravel the effect of different water management practices (aerobic, aerobic-flooded, and flooded) on Cd and As accumulation in rice grains of two different varieties. In pot experiment, Cd or As was also added into the soil as treatment. Pots without Cd or As addition were maintained as control. Results indicated that water management practices significantly influenced the Cd and As concentration in rice grains and aerobic cultivation of rice furnished less As concentration in its grains. Nonetheless, Cd concentration in this treatment was higher than the grains of flooded rice. Likewise, in field study, aerobic and flooded rice cultivation recorded higher Cd and As concentration, respectively. However, growing of rice in aerobic-flooded conditions decreased the Cd concentration by 9.38 times on average basis as compared to aerobic rice. Furthermore, this treatment showed 28% less As concentration than that recorded in flooded rice cultivation. The results suggested that aerobic-flooded cultivation may be a promising strategy to reduce the Cd and As accumulations in rice grains simultaneously.

  17. Hydraulic conductance as well as nitrogen accumulation plays a role in the higher rate of leaf photosynthesis of the most productive variety of rice in Japan.

    Science.gov (United States)

    Taylaran, Renante D; Adachi, Shunsuke; Ookawa, Taiichiro; Usuda, Hideaki; Hirasawa, Tadashi

    2011-07-01

    An indica variety Takanari is known as one of the most productive rice varieties in Japan and consistently produces 20-30% heavier dry matter during ripening than Japanese commercial varieties in the field. The higher rate of photosynthesis of individual leaves during ripening has been recognized in Takanari. By using pot-grown plants under conditions of minimal mutual shading, it was confirmed that the higher rate of leaf photosynthesis is responsible for the higher dry matter production after heading in Takanari as compared with a japonica variety, Koshihikari. The rate of leaf photosynthesis and shoot dry weight became larger in Takanari after the panicle formation and heading stages, respectively, than in Koshihikari. Roots grew rapidly in the panicle formation stage until heading in Takanari compared with Koshihikari. The higher rate of leaf photosynthesis in Takanari resulted not only from the higher content of leaf nitrogen, which was caused by its elevated capacity for nitrogen accumulation, but also from higher stomatal conductance. When measured under light-saturated conditions, stomatal conductance was already decreased due to the reduction in leaf water potential in Koshihikari even under conditions of a relatively small difference in leaf-air vapour pressure difference. In contrast, the higher stomatal conductance was supported by the maintenance of higher leaf water potential through the higher hydraulic conductance in Takanari with the larger area of root surface. However, no increase in root hydraulic conductivity was expected in Takanari. The larger root surface area of Takanari might be a target trait in future rice breeding for increasing dry matter production.

  18. Nitrogen and azolla response on growth of rice plant of Mitra-I variety with SRI method

    International Nuclear Information System (INIS)

    Nurmayulis; Putra Utama; Dewi Firnia; Hasnan Yani; Ania Citraresmini

    2011-01-01

    The research was conducted in Cisadap, Bunter Village, District of Sukadana, Ciamis Regency, West Java Province from January to May 2011. This study was carried out to know the response of growth of rice plant which was fertilized by nitrogen fertilizer and Azolla michrophylla using the system of rice intensification. This research used five dozes of nitrogen fertilizer (0 %, 25 %, 50 %, 75 %, 100 %) from N 92 kg ha -1 as a recommended nitrogen fertilizer (urea 200 kg ha -1 ), and also 1,13 ton ha -1 Azolla michrophylla. The result obtained from this research showed that the application of N fertilizer at 50 % of the recommend dose (100 kg ha -1 ) with adding Azolla at a rate of 1.13 t ha -1 gave good result in the terms of plant height at 2-6 weeks after planting and number of tillers at 2-7 weeks after planting. Interaction of the 50 % N fertilizer from the recommended dose planting 1,13 t ha -1 give the highest dry weight of Azolla of plants at seven weeks after planting. (author)

  19. Comparing organic and conventional olive groves relative to energy use and greenhouse gas emissions associated with the cultivation of two varieties

    International Nuclear Information System (INIS)

    Taxidis, Efstratios T.; Menexes, George C.; Mamolos, Andreas P.; Tsatsarelis, Constantinos A.; Anagnostopoulos, Christos D.; Kalburtji, Kyriaki L.

    2015-01-01

    Highlights: • Multivariate statistical methods were applied to evaluate 88 olive groves. • Three main groups (high, medium, low energy inputs) were revealed. • The grouping was based on management practices and geographical location. • Best farming practices regulate the balance between environment and agriculture. - Abstract: Organic farming is applied in olive groves in Lesvos Island the last 20 years. “Kolovi” and “Adramitiani”, two dominant varieties are cultivated. Since there is limited research for energy inputs in olive groves, 62 conventional and 26 organic farms were selected during 2011–2013 in order to (a) determine the differences in energy flow among farming systems and varieties, (b) group olive groves based on energy flow indicators, (c) compare the CO 2 -equivalent emissions among farming systems and varieties. A combination of univariate and multivariate statistical methods was applied. Hierarchical Cluster Analysis (HCA) revealed three farm groups, all consisted of conventional and/or organic olive groves and included both varieties. Group 1 had the lowest energy inputs, while Group 3 the highest. Fuels and transportation, as energy inputs, had the highest contribution in farms’ grouping. A large number of external variables was studied, most of which (fruit production, olive oil production, pomace production, shoot production, olive oil energy production, pomace energy production, shoot energy production, total energy inputs, total energy outputs, intensity, energy efficiency, and energy productivity) had statistically significant differences among the three Groups. Management practices along with geographical location could be a reasonable explanation for the differences between the groups of studied olive groves. Group 3 had the highest non-renewable energy inputs (14,683.5 MJ ha −1 ) and consumption (2.4 MJ kg −1 ) and gas emissions (1.27 Mg ha −1 CO 2 , 0.17 kg ha −1 CH 4 , and 10.31 g ha −1 N 2 O). Group 2 had

  20. Rice agroecosystem and the maintenance of biodiversity

    International Nuclear Information System (INIS)

    Ahyaudin Ali

    2002-01-01

    Rice fields are a special type of wetland. They are shallow, constantly disturbed and experience extremes in temperature and dissolved oxygen content. They receive nutrients in the form of fertilizers during rice cultivation. Rice fields; support a variety of flora and fauna that have adapted and adjusted themselves to the extreme conditions. Since rice fields also support populations of wild fish, rice?fish integration should be done in order to optimize land use and provide supplementary income to farmers. Rice?fish farming encourages farmers to judiciously apply pesticides and herbicides in their fields thus helping to control excessive and unwarranted use of these chemicals. Rice fields also support many migratory and nonmigratory bird species and provides habitat for small mammals. Thus the rice agroecosystem helps to maintain aquatic biodiversity. The Muda rice agroecosystem consists of a troika of interconnected ecosystems. The troika consisting of reservoirs, the connecting network of canals and the rice fields; should be investigated further. This data is needed for informed decision-making concerning development and management of the system so that productivity and biodiversity can be maintained and sustained. (Author)

  1. Haplotype Diversity at Sub1 Locus and Allelic Distribution Among Rice Varieties of Tide and Flood Prone Areas of South-East Asia

    Directory of Open Access Journals (Sweden)

    A.S.M. Masuduzzaman

    2017-07-01

    Full Text Available Single nucleotide polymorphisms and restriction digestion-based haplotype variations among 160 flood prone rice varieties were analyzed with enzymes Alu I and Cac8 I to generate polymorphisms at Sub1A and Sub1C loci (conferring submergence tolerance, respectively. Haplotype associated with phenotype was used to study the haplotype variations at Sub1A and Sub1C loci and to determine their functional influence on submergence tolerance and stem elongation. Three patterns at Sub1A locus, Sub1A0 (null allele, Sub1A1 (does not cut and Sub1A2 (one SNP, and four patterns at Sub1C locus, Sub1C1, Sub1C2, Sub1C3 and Sub1C4, were generated. Both tolerant Sub1A1 and intolerant Sub1A2 had the same length, but the difference was presence of a restriction site in the Sub1A2, but absent at the Sub1A1. Further, two types of polymorphism were detected at the Sub1C, one included major length polymorphisms (165, 170 and 175 bp and the other was a single restriction site at different position. Eight haplotypes (different combinations of the two loci, A1C1, A1C2, A1C4, A2C2, A2C4, A0C2, A0C3 and A0C4, were detected among 160 varieties. Haplotype A1C1 was comparatively more related to haplotypes A1C2 and A1C4, having the same Sub1A allele, and these haplotypes were found only in Bangladeshi, Sri Lankan and Indian varieties. Most tolerant varieties in A1C1 haplotype showed slow elongation, having tolerant specific Sub1A1 and Sub1C1 alleles. Further, the varieties Madabaru and Kottamali (A2C2 also showed moderate level of tolerance without Sub1A1 allele. These varieties were different with FR13A and also suspected to carry different novel tolerant genes at other loci. These materials could be used for hybridization with Sub1 varieties for pyramiding additional tolerant specific alleles into a single genotype for improving submergence tolerance in rice.

  2. Endophytic Colonization and In Planta Nitrogen Fixation by a Herbaspirillum sp. Isolated from Wild Rice Species

    Science.gov (United States)

    Elbeltagy, Adel; Nishioka, Kiyo; Sato, Tadashi; Suzuki, Hisa; Ye, Bin; Hamada, Toru; Isawa, Tsuyoshi; Mitsui, Hisayuki; Minamisawa, Kiwamu

    2001-01-01

    Nitrogen-fixing bacteria were isolated from the stems of wild and cultivated rice on a modified Rennie medium. Based on 16S ribosomal DNA (rDNA) sequences, the diazotrophic isolates were phylogenetically close to four genera: Herbaspirillum, Ideonella, Enterobacter, and Azospirillum. Phenotypic properties and signature sequences of 16S rDNA indicated that three isolates (B65, B501, and B512) belong to the Herbaspirillum genus. To examine whether Herbaspirillum sp. strain B501 isolated from wild rice, Oryza officinalis, endophytically colonizes rice plants, the gfp gene encoding green fluorescent protein (GFP) was introduced into the bacteria. Observations by fluorescence stereomicroscopy showed that the GFP-tagged bacteria colonized shoots and seeds of aseptically grown seedlings of the original wild rice after inoculation of the seeds. Conversely, for cultivated rice Oryza sativa, no GFP fluorescence was observed for shoots and only weak signals were observed for seeds. Observations by fluorescence and electron microscopy revealed that Herbaspirillum sp. strain B501 colonized mainly intercellular spaces in the leaves of wild rice. Colony counts of surface-sterilized rice seedlings inoculated with the GFP-tagged bacteria indicated significantly more bacterial populations inside the original wild rice than in cultivated rice varieties. Moreover, after bacterial inoculation, in planta nitrogen fixation in young seedlings of wild rice, O. officinalis, was detected by the acetylene reduction and 15N2 gas incorporation assays. Therefore, we conclude that Herbaspirillum sp. strain B501 is a diazotrophic endophyte compatible with wild rice, particularly O. officinalis. PMID:11679357

  3. The Improvement of Atomita-4 Rice Variety Through Gamma Rays Irradiation of F1 Seeds from Atomita-4/Ir-64 Crossing

    International Nuclear Information System (INIS)

    Lilik Harsanti; Mugiono

    2004-01-01

    Atom ita-4 rice variety was crossed with IR-64 variety in the greenhouse at the Center for Application of Isotopes and Radiation-Batan, Pasar jumat in the wet season of 1994/1995. F 1 Seeds derived from Atomita-4/IR-64 crossing were irradiated by gamma rays at of 0.2 kGy dose. F 1 seeds were grown to obtain F 2 M 2 seed, and then selection of pedigree were carried out at F 2 generation. Six mutants lines were obtained purified and screened on biotypes 1, 2 and 3 brown plant hopper and bacterial leaf blight resistance by IRRI standard screening methods. The six mutant lines were tested for their potential yield at Pusakanegara and then continued tested in yield multi location test at several locations in Indonesia. Results of the screening test to brown plant hopper showed that two mutant lines Obs-1653/PsJ and Obs-1656/PsJ were resistant to biotype 1, biotype 2 and medium resistant to biotype 3. Obs-1653/PsJ and Obs-1656/PsJ also showed resistance to bacterial leaf blight strain 3 and medium resistance to strain 4. Results in the yield multi location test showed that Obs-1653/PsJ and Obs-1656/PsJ have highest yielding potential compared to IR-64 and Memberamo varieties. Those two mutant lines were released as new varieties under the name Merauke and Kahayan in 2001 and 2003 respectively. (author)

  4. Gene, protein, and network of male sterility in rice

    OpenAIRE

    Wang, Kun; Peng, Xiaojue; Ji, Yanxiao; Yang, Pingfang; Zhu, Yingguo; Li, Shaoqing

    2013-01-01

    Rice is one of the most important model crop plants whose heterosis has been well-exploited in commercial hybrid seed production via a variety of types of male-sterile lines. Hybrid rice cultivation area is steadily expanding around the world, especially in Southern Asia. Characterization of genes and proteins related to male sterility aims to understand how and why the male sterility occurs, and which proteins are the key players for microspores abortion. Recently, a series of genes and prot...

  5. Cloning and Sequence Analysis of the Amylase Gene from the Rice Pest Walker and its Inhibitor from Wheat (Variety MP Sehore

    Directory of Open Access Journals (Sweden)

    Poonam Sharma

    2009-01-01

    Full Text Available Scirpophaga incertulas Walker (Lepidoptera: Pyralideae, commonly known as yellow stem borer, is a predominant monophagous pest of rice, which causes 5% to 30% loss of the rice crop. We report for the first time, the cloning and sequence analysis of the amylase gene of this pest. The cloned gene translates into a protein of 487 amino acids having a predicted molecular weight of 54,955 daltons and a theoretical pI of 5.9. The 3D structure of the amylase is predicted from its amino acid sequence by homology modeling using the structure of the amylase from Tenebrio molitor L (Coleoptera: Tenebrionidae. We also report the purification of a dimeric α-amylase inhibitor from a local variety of wheat MP Sehore that is specific for the amylase of this pest and does not inhibit human salivary amylase or porcine pancreatic amylase. The gene encoding this inhibitor has been cloned and its sequence has been analysed to find a possible explanation for this specificity.

  6. Contrasting effects of elevated CO2 on Cu and Cd uptake by different rice varieties grown on contaminated soils with two levels of metals: Implication for phytoextraction and food safety

    International Nuclear Information System (INIS)

    Li Zhongyang; Tang Shirong; Deng Xiaofang; Wang Ruigang; Song Zhengguo

    2010-01-01

    A pot experiment in six open-top chambers with two levels of CO 2 and two multi-metal contaminated soils was conducted to investigate combined effects of elevated CO 2 levels and metals (Cu and Cd) on rice. Elevated CO 2 significantly increased the total dry weight biomass of six Chinese rice by 20-108 and 32-142% for low and high levels of contaminated soils, respectively. We observed dilution/little varied phenomena in grain Cu concentration in six rice varieties grown on both contaminated soils under elevated CO 2 . We found significantly higher Cd concentrations in the parts of three rice varieties under elevated CO 2 , but lower levels for the others. Two major conclusions can be drawn from our study: (1) rice varieties with significantly increased biomass and metal uptake under elevated CO 2 exhibit greater potential for phytoextraction and (2) given expected global increases in CO 2 concentration, CO 2 -induced accumulation of metals in rice might be a component contributing to the potential health risk in the future, with Cd being a more important threat to human health than Cu.

  7. Contrasting effects of elevated CO{sub 2} on Cu and Cd uptake by different rice varieties grown on contaminated soils with two levels of metals: Implication for phytoextraction and food safety

    Energy Technology Data Exchange (ETDEWEB)

    Li Zhongyang [Centre for Research in Ecotoxicology and Environmental Remediation, Agro-Environmental Protection Institute, Ministry of Agriculture, Tianjin 300191 (China); Open Key Laboratory of Agro-environment and Agro-product Safety of Ministry of Agriculture, Tianjin (China); Tang Shirong, E-mail: tangshir@hotmail.com [Centre for Research in Ecotoxicology and Environmental Remediation, Agro-Environmental Protection Institute, Ministry of Agriculture, Tianjin 300191 (China); Open Key Laboratory of Agro-environment and Agro-product Safety of Ministry of Agriculture, Tianjin (China); Deng Xiaofang; Wang Ruigang; Song Zhengguo [Centre for Research in Ecotoxicology and Environmental Remediation, Agro-Environmental Protection Institute, Ministry of Agriculture, Tianjin 300191 (China); Open Key Laboratory of Agro-environment and Agro-product Safety of Ministry of Agriculture, Tianjin (China)

    2010-05-15

    A pot experiment in six open-top chambers with two levels of CO{sub 2} and two multi-metal contaminated soils was conducted to investigate combined effects of elevated CO{sub 2} levels and metals (Cu and Cd) on rice. Elevated CO{sub 2} significantly increased the total dry weight biomass of six Chinese rice by 20-108 and 32-142% for low and high levels of contaminated soils, respectively. We observed dilution/little varied phenomena in grain Cu concentration in six rice varieties grown on both contaminated soils under elevated CO{sub 2}. We found significantly higher Cd concentrations in the parts of three rice varieties under elevated CO{sub 2}, but lower levels for the others. Two major conclusions can be drawn from our study: (1) rice varieties with significantly increased biomass and metal uptake under elevated CO{sub 2} exhibit greater potential for phytoextraction and (2) given expected global increases in CO{sub 2} concentration, CO{sub 2}-induced accumulation of metals in rice might be a component contributing to the potential health risk in the future, with Cd being a more important threat to human health than Cu.

  8. In silico analysis, mapping of regulatory elements and corresponding dna-protein interaction in polyphenol oxidase gene promoter from different rice varieties

    International Nuclear Information System (INIS)

    Mahmood, T.; Rehman, M.; Aziz, E.

    2015-01-01

    Polyphenol oxidase (PPO) is an important enzyme that has positive impact regarding plant resistance against different biotic and abiotic stresses. In the present study PPO promoter from six different rice varieties was amplified and then analyzed for cis- and trans-acting elements. The study revealed a total of 79 different cis-acting regulatory elements including 11 elements restricted to only one or other variety. Among six varieties Pakhal-Basmati had highest number (5) of these elements, whereas C-622 and Rachna-Basmati have no such sequences. Rachna-Basmati, IR-36-Basmati and Kashmir- Basmati had 1, 2 and 3 unique elements, respectively. Different elementsrelated to pathogen, salt and water stresses were found, which may be helpful in controlling PPO activity according to changing environment. Moreover, HADDOCK was used to understand molecular mechanism of PPO regulation and it was found that DNA-protein interactions are stabilized by many potential hydrogen bonds. Adenine and arginine were the most reactive residues in DNA and proteins respectively.Structural comparison of different protein-DNA complexes show that even a highly conserved transcriptional factor can adopt different conformations when they contact a different DNA binding sequence, however their stable interactions depend on the number of hydrogen bonds formed and distance. (author)

  9. Improvement results of rice (Oryza glaberima) by induced mutation

    International Nuclear Information System (INIS)

    Cisse, F.

    1994-01-01

    In Mali, rice (Orzya glaberima) is still largely cultivated under conditions of natural semi-controlled submersion. To improve productivity the local varieties have been gradually replaced by new varieties, but the yields of these became lower because of the irregularity of the rain and the comparative weakness of the strain. For this reason a programme to improve the local varieties by means of gamma radiation has been undertaken. This document presents the results obtained to date

  10. Field performance of thirty mutant lines of the rice (Oryza sativa L.) varieties ICTA-Virginia and Precoz-ICTA

    International Nuclear Information System (INIS)

    Montepeque, R.; Molina, L. G.; Lopez, J. J.; Pazos, W.; Ramirez, J.

    1993-01-01

    Fifteen mutant lines from the variety ICTA-Virginia and fifteen from the variety Precozicta were evaluated according to their agronomic characteristics under conditions of the Motagua river valley during 1992. The objective was to select genotypes showing resistance to disease caused by Pyricularia grisea. The analysis of variance did not show significative differences among ICTA-Virginia mutants. The highest yield was form MV-860, 8.17 TM/ha and the lowest 5.31 TM/ha for MV-411. Significant differences were found among mutant lines from Precozicta. The highest yields were 6.06, 5.80 and 5.52 TM/ha for MPI-1189, MPI-1664 and MPI-1346 respectively. Inoculation with Pyricularia was made spraying it over the crop. However, it was not possible the evaluation of the disease in the neck (neck blast) due to absence of the pathogen. 5 tabs.(Author)

  11. Effect of temperature of 32P uptake and translocation in varieties and a cross of japonica and indica rice

    International Nuclear Information System (INIS)

    Reddy, P.R.; Madhusudhan Rao, L.

    1976-01-01

    Three genotypes of rice, one in each of japonica, indica, and a japonica-indica cross were grown in half-Hoagland culture solution. 32 P (40 μCi/I) was added to each of these culture jars and placed at 10,20,30 and 40degC in growth chamber for a period of 1,5 and 10 h at each temperature. The actual uptake of 32 P in plant was very low at 10 and 20degC; moderately low at 40degC and very low at 30degC in japonica and the cross. The uptake was higher at 30 and 40degC in indica. This indicates their ability in uptake of fertilizer at these temperatures. The percentage of absorbed ions decreased at 10 and 20degC and increased at 30 and 40degC with increased duration in all the genotypes. The actual uptake of ions was in proportion to the absorbed ions at higher temperatures and inversely proportional at lower temperatures. The percentage of translocation of 32 P to shoot increased with time between 20 and 50degC in indica, whereas it was high only at 30 and 40degC in japonica and the cross. The translocation was low at 10degC in all the genotypes. The uptake of 32 P at different concentrations under different diurnal temperatures (20/10, 30/20 and 40/30degC) was also studied. (author)

  12. Investigating differences in light stable isotopes between Thai jasmine rice and Sungyod rice

    Science.gov (United States)

    Kukusamude, C.; Kongsri, S.

    2017-10-01

    We report the differences in light stable isotopes between two kinds of Thai rice (Thai jasmine and Sungyod rice). Thai jasmine rice and Sungyod rice were cultivated in the northeast and the south of Thailand. Light isotopes including 13C, 15N and 18O of Thai jasmine rice and Sungyod rice samples were carried out using isotope ratio mass spectrometry (IRMS). Thai jasmine rice (Khao Dawk Mali 105) was cultivated from Thung Kula Rong Hai area, whereas Sungyod rice was cultivated from Phathalung province. Hypothesis testing of difference of each isotope between Thai jasmine rice and Sungyod rice was also studied. The study was the feasibility test whether the light stable isotopes can be the variables to identify Thai jasmine rice and Sungyod rice. The result shows that there was difference in the isotope patterns of Thai jasmine rice and Sungyod rice. Our results may provide the useful information in term of stable isotope profiles of Thai rice.

  13. Manejo de água e de fertilizante potássico na cultura de arroz irrigado Water and potassium fertilization management for irrigated rice cultivation

    Directory of Open Access Journals (Sweden)

    Alberto Baêta dos Santos

    1999-04-01

    Full Text Available O manejo da água de irrigação e as doses e épocas de aplicação de fertilizantes tornam-se aspectos de extrema importância no êxito do aproveitamento das várzeas para o cultivo de arroz (Oryza sativa L. irrigado ou este seguido de outras espécies. Com o objetivo de comparar distintas formas de manejo de água e de fertilizante potássico no comportamento do arroz irrigado, foram conduzidos experimentos por três anos consecutivos, em um Inceptissolo. Foram estudados os efeitos de manejo de água (MA1 - inundação contínua e MA2 - inundação intermitente seguida de contínua e o modo de aplicação de fertilizante potássico (K1 - na semeadura; K2 - parcelada e K3 - meia dose parcelada. O manejo de água apresentou efeito mais expressivo sobre o comportamento do arroz que o do fertilizante potássico. A inundação contínua durante todo o ciclo da cultura proporcionou maiores rendimentos de grãos, expressando maiores valores dos parâmetros produtivos, e melhorou a qualidade industrial dos grãos. Com esta irrigação, o parcelamento da adubação potássica aumentou o aproveitamento do fertilizante. Os manejos do fertilizante potássico afetaram diferentemente o comportamento da cultura do arroz nas distintas formas de manejo de água.Irrigation water levels and timing of potassium fertilization is extremely important for the use of lowlands for irrigated rice (Oryza sativa L. cultivation in crop rotation. A field experiment was conduced for three consecutive years in Inceptisol to study the effects of water management (WM1 - continuous flooding and WM2 - intermittent flooding followed continuous flooding and mode of potassium fertilizer application (K1 - at sowing; K2 - fractional application and K3 - fractional application of half levels on grain yield and yield components of irrigated rice. Water management presented expressive effect on rice performance as compared to potassium fertilization. Continuous flooding during whole

  14. Gas exchange variability and water use efficiency of thirty landraces of rice still under cultivation in Kumaun region of the Indian Central Himalaya.

    Science.gov (United States)

    Agnihotri, R K; Palni, L M S; Chandra, Suman; Joshi, S C

    2009-10-01

    Gas exchange characteristics of thirty landraces of rice (Oryza sativa L.) along with an introduced variety VL-206 (recommended high yielding variety for rainfed uplands of the Indian Central Himalaya, ICH), grown in earthen pots and kept in the open at the Institute nursery at Kosi (1150m amsl, 79°38'10″E and 29°38'15″N) were studied. The photosynthetic rate (Pn) and other related parameters were found to vary considerably among landraces. Based on the comparison of Pn of landraces with that of VL-206, these were categorized into two groups: i) high (〉6.0 µmol m(-2)s(-1)), and ii) low (water use efficiency (WUE), mesophyll efficiency (low Ci/gs ratio) and chlorophyll (Chl) content in comparison to landraces in the low Pn group. However, significant differences were not found in the intercellular CO2 concentration (Ci) between landraces belonging to the high and low Pn groups. Differences among landraces were found with regard to dark respiration; landraces with low Pn respired proportionately more of the carbon fixed than those of high Pn group. Based on the studied gas exchange characteristics Saurajubawan, Syaudhan and Taichin, local landraces of rice, may be identified as potential cultivars with high Pn and WUE.

  15. PRELIMINARY STUDIES FOR PRODUCING CRUDE LIPASE FROM TEMPE’S MOULD CULTIVATED IN RICE-HUSK-BASED SOLID MEDIA

    OpenAIRE

    Bardant, Teuku Beuna; Sembiring, Kiky Corneliasari; Setiawan, Achmad Hanafi

    2010-01-01

    The goal of these preliminary studies is to support Indonesian program for increasing palm oil added value through independent production technology based on Indonesian natural resources. Various palm oil derivatives could be synthesized enzymatically using lipase from microbes that available in Indonesia. Tempe's mould is available in abundance in Indonesia and had already been proved for producing lipase. This paper provides information about producing crude lipase from Tempe's mould cultiv...

  16. Linkage analysis for the gametic lethal gene of a rice variety 'Koshihikari' and the semi-dwarfing gene induced in 'Koshihikari'

    International Nuclear Information System (INIS)

    Tomita, M.; Tanisaka, T.; Okumoto, Y.; Yamagata, H.

    1990-01-01

    Full text: 'Koshihikari', a Japanese tall variety, is now most widely cultivated in Japan because of its good quality and taste, but is extremely poor in lodging resistance. In order to create a semi-dwarf 'Koshihikari', large scale mutation breeding was carried out at Hokuriku Agricultural Experiment Station, resulting in the production of an excellent semi-dwarf mutant strain 'Hokuriku 100'. It has extensively been used as cross parent. Genetic analyses revealed that the semi-dwarfness of 'Hokuriku 100' is controlled by two mutant genes, a recessive semi-dwarfness gene sd(t) and a non-gametic lethal gene lt m mutated from the genetic lethal gene of 'Koshihikari' lt, which would cause abortion of both male and female gametes when it occurs together with sd(t). Further analyses led to conclude that It is located on chromosome 9, sd(t) on chromosome 10. (author)

  17. Effects of Population Density and Host Availability on The Migration Process of Brown Planthopper Fed Using Susceptible and Resistant Rice Varieties

    Directory of Open Access Journals (Sweden)

    Imam Habibi

    2016-12-01

    Full Text Available Brown planthopper, Nilaparvata lugens Stal. (Hemiptera: Delphacidae, is an important pest of rice. This pest can cause hopperburn and field failure. This research aimed to determine the effects of population density and host availability on migration of N. lugens. The criteria used to justify the effects of host availability and population density on migration of N. lugens were based the hardness and tannin tests of the rice stems, fecundity of N. lugens, and the life cycle of N. lugens. The research was conducted under the temperature of 29.42°C with relative humidity of 61% and Light 12: Dark 12 times, using ten pairs of N. lugens brachypterous (F0 constant and then was added with five male adults on fifth days after the first infestation (F0 changed. The varieties used were IR64, as a resistant variety, and Ketan Lusi, as a susceptible variety. The results showed that the adding of the macropterous males did not affect the number of macropterous, because of that has been preplanned by the F0. Therefore, the percentage of existing macropterous was 51−52%.   INTISARI   Wereng Batang Cokelat (WBC merupakan salah satu hama tanaman padi yang sangat penting. Kerusakan parah dapat menyebabkan hopperburn dan puso (gagal panen. Tujuan penelitian ini adalah mengetahui pengaruh kepadatan populasi dan tanaman inang sebagai tempat migrasi WBC. Parameter yang dikaji untuk mengetahui pengaruh kepadatan populasi WBC dan tanaman inang tempat migrasi WBC berdasarkan tingkat kekerasan dan kandungan tanin batang tanaman padi, fekunditas WBC, dan siklus hidup WBC. Penelitian ini dilakukan pada temperatur 29.42˚C dengan kelembapan relatif 61% dan durasi siang hari 12 jam: durasi malam hari 12 jam. Metode yang dilakukan adalah dengan menggunakan 10 pasang imago WBC brakhiptera (F0 konstan, kemudian dilakukan penambahan 5 ekor imago jantan pada hari kelima setelah infestasi awal (F0 diubah. Varietas padi yang digunakan yaitu padi varietas IR64 sebagai varietas

  18. Proteomic Analysis of Copper-Binding Proteins in Excess Copper-Stressed Roots of Two Rice (Oryza sativa L. Varieties with Different Cu Tolerances.

    Directory of Open Access Journals (Sweden)

    Chen Chen

    Full Text Available To better understand the mechanisms involved in the heavy metal stress response and tolerance in plants, a proteomic approach was used to investigate the differences in Cu-binding protein expression in Cu-tolerant and Cu-sensitive rice varieties. Cu-binding proteins from Cu-treated rice roots were separated using a new IMAC method in which an IDA-sepharose column was applied prior to the Cu-IMAC column to remove metal ions from protein samples. More than 300 protein spots were reproducibly detected in the 2D gel. Thirty-five protein spots exhibited changes greater than 1.5-fold in intensity compared to the control. Twenty-four proteins contained one or more of nine putative metal-binding motifs reported by Smith et al., and 19 proteins (spots contained one to three of the top six motifs reported by Kung et al. The intensities of seven protein spots were increased in the Cu-tolerant variety B1139 compared to the Cu-sensitive variety B1195 (p<0.05 and six protein spots were markedly up-regulated in B1139, but not detectable in B1195. Four protein spots were significantly up-regulated in B1139, but unchanged in B1195 under Cu stress. In contrast, two protein spots were significantly down-regulated in B1195, but unchanged in B1139. These Cu-responsive proteins included those involved in antioxidant defense and detoxification (spots 5, 16, 21, 22, 28, 29 and 33, pathogenesis (spots 5, 16, 21, 22, 28, 29 and 33, regulation of gene transcription (spots 8 and 34, amino acid synthesis (spots 8 and 34, protein synthesis, modification, transport and degradation (spots 1, 2, 4, 10, 15, 19, 30, 31, 32 and 35, cell wall synthesis (spot 14, molecular signaling (spot 3, and salt stress (spots 7, 9 and 27; together with other proteins, such as a putative glyoxylate induced protein, proteins containing dimeric alpha-beta barrel domains, and adenosine kinase-like proteins. Our results suggest that these proteins, together with related physiological processes, play

  19. Genome-wide DNA polymorphism in the indica rice varieties RGD-7S and Taifeng B as revealed by whole genome re-sequencing.

    Science.gov (United States)

    Fu, Chong-Yun; Liu, Wu-Ge; Liu, Di-Lin; Li, Ji-Hua; Zhu, Man-Shan; Liao, Yi-Long; Liu, Zhen-Rong; Zeng, Xue-Qin; Wang, Feng

    2016-03-01

    Next-generation sequencing technologies provide opportunities to further understand genetic variation, even within closely related cultivars. We performed whole genome resequencing of two elite indica rice varieties, RGD-7S and Taifeng B, whose F1 progeny showed hybrid weakness and hybrid vigor when grown in the early- and late-cropping seasons, respectively. Approximately 150 million 100-bp pair-end reads were generated, which covered ∼86% of the rice (Oryza sativa L. japonica 'Nipponbare') reference genome. A total of 2,758,740 polymorphic sites including 2,408,845 SNPs and 349,895 InDels were detected in RGD-7S and Taifeng B, respectively. Applying stringent parameters, we identified 961,791 SNPs and 46,640 InDels between RGD-7S and Taifeng B (RGD-7S/Taifeng B). The density of DNA polymorphisms was 256.8 SNPs and 12.5 InDels per 100 kb for RGD-7S/Taifeng B. Copy number variations (CNVs) were also investigated. In RGD-7S, 1989 of 2727 CNVs were overlapped in 218 genes, and 1231 of 2010 CNVs were annotated in 175 genes in Taifeng B. In addition, we verified a subset of InDels in the interval of hybrid weakness genes, Hw3 and Hw4, and obtained some polymorphic InDel markers, which will provide a sound foundation for cloning hybrid weakness genes. Analysis of genomic variations will also contribute to understanding the genetic basis of hybrid weakness and heterosis.

  20. GENE FLOW BETWEEN RED RICE AND CULTIVATED RICE ESTIMATED BY MICROSATELLITE MARKERS FLUXO GÊNICO ENTRE ARROZ VERMELHO E ARROZ CULTIVADO ESTIMADO POR MEIO DE MARCADORES MICROSSATÉLITES

    Directory of Open Access Journals (Sweden)

    Francisco , Moura Neto

    2007-09-01

    Full Text Available

    The study aimed to evaluate the capacity of SSR markers to detect the gene flow between the red rice (RR and the cultivated rice (CR. SSR is currently used in plant genomic analysis due to the high information content, to be co-dominant, and based on the PCR reaction. The field experiment was organized in ten concentric circles, 5 m to 50 m apart from a central red rice plant, assumed as the pollen donor. One hundred twenty rice CR plants, cv. BR-Irga 409, were planted in the intersections of the concentric circles and the twelve radii. From 51 SSR markers, four were selected due to their capacity to detect the polymorphism between RR and CR, aiming to identify RR alleles in seeds produced by BR-Irga 409 plants. The maximum distance found for gene flow between RR and CR plants was 10 m from the RR plant. In theory, at 0.1% cross pollination rate, this distance can generate 4,710 hybrids between RR and CR. In the next generation, about 3,532 plants would produce exclusively rice grains with red color. The SSR markers were able to identify the gene flow between RR and CR; therefore, they can be useful to increase the precision of cross pollination rate estimates in rice, mainly if used with other methodologies (e.g., herbicide tolerant plants.

    KEY WORDS: Cross pollination; microsatellite markers; Oryza sativa.

    Este trabalho objetivou avaliar a capacidade de marcadores SSR em detectar a ocorrência de fluxo gênico entre o arroz vermelho (AV e o arroz cultivado (AC. Marcadores SSR são utilizados em análise genômica de plantas devido ao alto conteúdo informativo, serem co-dominantes e baseados na reação de PCR. O ensaio de campo foi realizado em dez círculos concêntricos de 5 m a 50 m de distância, a partir de uma planta AV central, que foi a fonte

  1. Genetic Diversity of Wild Rice Species in Yunnan Province of China

    OpenAIRE

    Zai-quan CHENG; Fu-you YING; Ding-qing LI; Teng-qiong YU; Jian FU; Hui-jun YAN; Qiao-fang ZHONG; Dun-yu ZHANG; Wei-jiao LI; Xing-qi HUANG

    2012-01-01

    Yunnan Province of China is one of the important centers for origin and evolution of cultivated rice worldwide. Wild rice is the ancestor of the cultivated rice. Many elite traits of wild rice have widened the genetic basis in cultivated rice. However, many populations of wild rice species have disappeared in the past few years. Therefore, the current status of wild rice resources should be updated and the genetic diversity of wild rice species should be examined for further germplasm preserv...

  2. Damage by Tibraca limbativentris Stål (Pentatomidae) to Upland Rice Cultivated in Amazon Rainforest Region (Brazil) at Different Growth Stages.

    Science.gov (United States)

    Krinski, D; Foerster, L A

    2017-02-01

    In this study, we evaluated the damage caused in the field by Tibraca limbativentris Stål adults at different levels of infestation (0, 1, 2, and 4 stink bugs) per three rice plants during three growth stages (V8, V13, and R4 stages) of upland rice cultivated in southwestern of Pará State, Amazon Rainforest region, Brazil. Heading time (panicle exertion) was affected by T. limbativentris infestations mainly in the vegetative stage and the whiteheads percentage in treatments ranged from 18.2 to 38%. The dead hearts percentages varied between 0 and 21.5%, and the mean number of primary branches (ramifications) ranged from 5.9 ± 0.4 to 12.3 ± 0.2. The number of empty spikelets was only affected in infestations with four insects/three plants, while the quantity of filled grains per panicle was affected only when infestations occurred during the vegetative stage. The total number of spikelets (filled + empty) per panicle decreased significantly in all phenological stages, and the percentage of damage ranged from 17 to 44% among treatments. Based on the proportion of damage observed, we suggest doubling the number of insects presently used as action threshold to 2 and 4 stink bugs per 15 stalks sampled for the vegetative stage, and of 1 or 2 stink bugs per 15 stalks sampled at the beginning of reproductive stage (R3/R4). Also, the field should be monitored during the entire vegetative stage, since most damage was observed in this phenological stage.

  3. Marker-assisted introgression of drought tolerance from wild ancestors into popular Indian rice varieties using a 7K Infinium SNP array

    Directory of Open Access Journals (Sweden)

    Ravindra Donde

    2017-10-01

    Full Text Available Recent advances in the area of genomics have led to the development of high throughput genotyping platforms that have immensely contributed to molecular breeding programs. Custom-designed single nucleotide polymorphism (SNP arrays provide an efficient, cost effective, high throughput genotyping tool for QTL/gene mapping, variety identification, marker-assisted selection, etc. In the current study, two interspecific libraries of Chromosome Segment Substitution Lines (CSSLs were evaluated under both drought and control conditions to identify lines with superior yield under drought. The CSSL libraries consisted of 48 BC4F3 lines derived from O. sativa cv. Curinga (tropical japonica x O. rufipogon, and 32 BC4F3 lines derived from O. sativa cv. Curinga (tropical japonica x O. meridionalis. The phenotypic screening of these 80 CSSLs led to the identification of three lines, MER-20, RUF-16, and RUF-44, that yielded well under drought stress. This line was backcrossed with popular rice variety of India, Swarna-Sub1 to introgress wild chromosome segments responsible for reproductive stage drought tolerance. During backcrossing, tracking of wild introgressions and monitoring of recurrent parent genome recovery was facilitated by the use of the Cornell 6K and 7K Infinium rice SNP arrays. The 6K and 7K SNP arrays assayed 5275 SNPs and 7099 SNPs, respectively, distributed across the 12 chromosomes. In our populations of (MER-20X Swarna sub1 BC2F1 lines, 1775 SNPs were polymorphic using the 6K array. The percentage of recurrent parent genome in these backcrossed lines ranged from 33-92% and the percentage of wild donor genome ranged from 8-67%. Using genotypic selection, 5% of plants were identified for further marker assisted backcrossing, based on the presence of the target donor (wild segment and maximum recovery of recurrent parent background. In the next generation, BC3F1 lines were genotyped using the 7K SNP array, which identified 2521 polymorphic SNPs

  4. Determination of contents and antioxidant activity of free and bound phenolics compounds and in vitro digestibility of commercial black and red rice (Oryza sativa L.) varieties.

    Science.gov (United States)

    Sumczynski, Daniela; Kotásková, Eva; Družbíková, Helena; Mlček, Jiří

    2016-11-15

    Black and red rices (Oryza sativa L.) were analysed for total flavonoids and phenolics and the HPLC profile including both free and bound phenolic fractions. Moreover, antioxidant activity and in vitro digestibility was determined. Content of flavonoids and polyphenols as well as antioxidant activity was higher in free phenolic fractions. Bound flavonoids in black rices were not significant contributors to antioxidant activity. The main free phenolics in black rices were ferulic, protocatechuic and trans-p-coumaric acids, while the major free phenolics in red rices were catechin, protocatechuic and caffeic acids. The main bound phenolics in black rices were ferulic and vanillic acids and quercetin, in red rice types, they were ferulic, syringic, trans-p-coumaric acids and quercetin. Newly, the presence of m-coumaric acid in red rices was detected. Steam cooked rices showed very high levels of organic matter digestibility, whereas red rices were significantly more digestible than black rices (p<0.05). Copyright © 2016 Elsevier Ltd. All rights reserved.

  5. Studies on mineral nutrition and safety of wild rice (Oryza L.).

    Science.gov (United States)

    Jiang, Shuli; Shi, Chunhai; Wu, Jianguo

    2009-01-01

    Mineral element contents of five wild rice were analyzed, including mineral nutrient elements such as phosphorus (P), potassium (K), calcium (Ca), sodium (Na), magnesium (Mg), iron (Fe), zinc (Zn), copper (Cu), manganese (Mn) and selenium (Se), and the potential toxic elements arsenic (As), mercury (Hg), lead (Pb) and cadmium (Cd). The results showed that the contents of K, Mg, Fe, Zn, Cu, Mn and Se in five wild rice materials were much higher than the cultivate variety Zhou 903 in both brown and milled rice. Wild rice also had lower potential toxic element contents of Hg, Pb and Cd compared with Zhou 903 in brown rice and milled rice, respectively. Among five wild rice samples, WR-3 from Uganda had the highest level of P, K, Ca, Na, Mg, Fe, Zn, Mn and Se, and the lowest contents of Hg, Pb and Cd.

  6. All roads lead to weediness: Patterns of genomic divergence reveal extensive recurrent weedy rice origins from South Asian Oryza.

    Science.gov (United States)

    Huang, Zhongyun; Young, Nelson D; Reagon, Michael; Hyma, Katie E; Olsen, Kenneth M; Jia, Yulin; Caicedo, Ana L

    2017-06-01

    Weedy rice (Oryza spp.), a weedy relative of cultivated rice (O. sativa), infests and persists in cultivated rice fields worldwide. Many weedy rice populations have evolved similar adaptive traits, considered part of the 'agricultural weed syndrome', making this an ideal model to study the genetic basis of parallel evolution. Understanding parallel evolution hinges on accurate knowledge of the genetic background and origins of existing weedy rice groups. Using population structure analyses of South Asian and US weedy rice, we show that weeds in South Asia have highly heterogeneous genetic backgrounds, with ancestry contributions both from cultivated varieties (aus and indica) and wild rice. Moreover, the two main groups of weedy rice in the USA, which are also related to aus and indica cultivars, constitute a separate origin from that of Asian weeds. Weedy rice populations in South Asia largely converge on presence of red pericarps and awns and on ease of shattering. Genomewide divergence scans between weed groups from the USA and South Asia, and their crop relatives are enriched for loci involved in metabolic processes. Some candidate genes related to iconic weedy traits and competitiveness are highly divergent between some weed-crop pairs, but are not shared among all weed-crop comparisons. Our results show that weedy rice is an extreme example of recurrent evolution, and suggest that most populations are evolving their weedy traits through different genetic mechanisms. © 2017 John Wiley & Sons Ltd.

  7. Influence of Climate Factors on Rice Yields in Cambodia

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    Dek Vimean Pheakdey

    2017-12-01

    Full Text Available Temperature and precipitation have been known as the key determinant factors to affect rice production in climate change. In this study, the relationship between climate variables and rice yields during 1993–2012 in Cambodia was analyzed and evaluated. The Ordinary Least Squares analysis was applied to examine the relationship of three climate variables (TCV including maximum temperature, minimum temperature and rainfall against seasonal rice yields. By this period, a remarkable increasing trend of annual temperature was observed whilst rainfall was not significantly changed. The TCV explains approximately 63% and 56% of the variability of rice yields in wet and dry seasons, respectively. It is found that in Cambodia, non-climate factors such as fertilizers, water, cultivars, and soil fertility cause 40% variation to rice yields, whereas the remaining 60% can be influenced by climate variability. The levels of temperature difference (LTD between maximum and minimum temperatures of the wet season (WS and dry season (DS were 7.0 and 8.6 oC, respectively. The lower value of LTD may cause the reduction of rice in WS (2.2 tons/ha as compared to that of DS (3.0 tons/ha. Rice yield has increased 50.5% and 33.8% in DS and WS, respectively, may due to the improvement of rice cultivation practices in Cambodia such as the better use of fertilizers, pest and weed control, and irrigation, and more effective rice cultivated protocol, as the increased trend of temperature may detrimentally affect rice yield. The breeding of heat and drought tolerance rice varieties and development of irrigation system are effective to reduce the negative influence from climate change to rice production in Cambodia.

  8. Greenhouse Gas Emissions and Global Warming Potential of Traditional and Diversified Tropical Rice Rotation Systems including Impacts of Upland Crop Management Practices i.e. Mulching and Inter-crop Cultivation

    Science.gov (United States)

    Janz, Baldur; Weller, Sebastian; Kraus, David; Wassmann, Reiner; Butterbach-Bahl, Klaus; Kiese, Ralf

    2016-04-01

    Paddy rice cultivation is increasingly challenged by irrigation water scarcity, while at the same time changes in demand (e.g. changes in diets or increasing demand for biofuels) will feed back on agricultural practices. These factors are changing traditional cropping patterns from flooded double-rice systems to the introduction of well-aerated upland crop systems in the dry season. Emissions of methane (CH4) are expected to decrease, while emissions of nitrous oxide (N2O) will increase and soil organic carbon (SOC) stocks will most likely be volatilized in the form of carbon dioxide (CO2). We measured greenhouse gas (GHG) emissions at the International Rice Research Institute (IRRI) in the Philippines to provide a comparative assessment of the global warming potentials (GWP) as well as yield scaled GWPs of different crop rotations and to evaluate mitigation potentials or risks of new management practices i.e. mulching and inter-crop cultivation. New management practices of mulching and intercrop cultivation will also have the potential to change SOC dynamics, thus can play the key role in contributing to the GWP of upland cropping systems. To present, more than three years of continuous measurement data of CH4 and N2O emissions in double-rice cropping (R-R) and paddy rice rotations diversified with either maize (R-M) or aerobic rice (R-A) in upland cultivation have been collected. Introduction of upland crops in the dry season reduced irrigation water use and CH4 emissions by 66-81% and 95-99%, respectively. Moreover, for practices including upland crops, CH4 emissions in the subsequent wet season with paddy rice were reduced by 54-60%. Although annual N2O emissions increased twice- to threefold in the diversified systems, the strong reduction of CH4 led to a significantly lower (pbalance but also with regard to soil fertility. New upland crop management practices where first implemented during land-preparation for dry season (July) 2015 where i) 6t/ha rice straw

  9. Long-term balancing selection at the Phosphorus Starvation Tolerance 1 (PSTOL1) locus in wild, domesticated and weedy rice (Oryza).

    Science.gov (United States)

    Vigueira, Cynthia C; Small, Linda L; Olsen, Kenneth M

    2016-04-22

    The ability to grow in phosphorus-depleted soils is an important trait for rice cultivation in many world regions, especially in the tropics. The Phosphorus Starvation Tolerance 1 (PSTOL1) gene has been identified as underlying the ability of some cultivated rice varieties to grow under low-phosphorus conditions; however, the gene is absent from other varieties. We assessed PSTOL1 presence/absence in a geographically diverse sample of wild, domesticated and weedy rice and sequenced the gene in samples where it is present. We find that the presence/absence polymorphism spans cultivated, weedy and wild Asian rice groups. For the subset of samples that carry PSTOL1, haplotype sequences suggest long-term selective maintenance of functional alleles, but with repeated evolution of loss-of-function alleles through premature stops and frameshift mutations. The loss-of-function alleles have evolved convergently in multiple rice species and cultivated rice varieties. Greenhouse assessments of plant growth under low- and high-phosphorus conditions did not reveal significant associations with PSTOL1 genotype variation; however, the striking signature of balancing selection at this locus suggests that further phenotypic characterizations of PSTOL1 allelic variants is warranted and may be useful for crop improvement. These findings suggest balancing selection for both functional and non-functional PSTOL1 alleles that predates and transcends Asian rice domestication, a pattern that may reflect fitness tradeoffs associated with geographical variation in soil phosphorus content.

  10. Changes in DNA Methylation Pattern at Two Seedling Stages in Water Saving and Drought-Resistant Rice Variety after Drought Stress Domestication

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    Xiao-guo ZHENG

    2014-09-01

    Full Text Available Recent studies revealed that DNA methylation plays an important role in plant growth and development. In this study, a water-saving and drought-resistant rice variety Huhan 3 was subjected to drought stress from tillering to grain-filling stages in six successive growth cycles. The variations in DNA methylation pattern between the original generation (G0 and the sixth generation (G6 were analyzed by using methylation sensitive amplification polymorphism method. The results revealed that the methylated loci accounted for 34.3% to 34.8% of the total loci. Among these methylated loci, 83.1% to 84.8% were full- and hyper-methylated and 15.2% to 16.9% were hemi-methylated. The DNA methylation level decreased from the three-leaf to four-leaf stages in Huhan 3. Differentially methylated loci (DML between generations or/and between different developmental stages accounted for 4.0% of the total loci, most of which were only related to plant development (57.9%. Compared to G0, the DNA methylation pattern of G6 changed after drought domestication, at the three-leaf stage, de-methylation accounting for 59.1%, while at the four-leaf stage, re-methylation for 47.9%. Genome-wide alternations of DNA methylation were observed between the two seedling stages, and DML mainly occurred on the gene's promoter and exon region. The genes related to DML involved in a wide range of functional biology and participated in many important biological processes.

  11. Little White Lies: Pericarp Color Provides Insights into the Origins and Evolution of Southeast Asian Weedy Rice

    Science.gov (United States)

    Cui, Yongxia; Song, Beng Kah; Li, Lin-Feng; Li, Ya-Ling; Huang, Zhongyun; Caicedo, Ana L.; Jia, Yulin; Olsen, Kenneth M.

    2016-01-01

    Weedy rice is a conspecific form of cultivated rice (Oryza sativa L.) that infests rice fields and results in severe crop losses. Weed strains in different world regions appear to have originated multiple times from different domesticated and/or wild rice progenitors. In the case of Malaysian weedy rice, a multiple-origin model has been proposed based on neutral markers and analyses of domestication genes for hull color and seed shattering. Here, we examined variation in pericarp (bran) color and its molecular basis to address how this trait evolved in Malaysian weeds and its possible role in weed adaptation. Functional alleles of the Rc gene confer proanthocyanidin pigmentation of the pericarp, a trait found in most wild and weedy Oryzas and associated with seed dormancy; nonfunctional rc alleles were strongly favored during rice domestication, and most cultivated varieties have nonpigmented pericarps. Phenotypic characterizations of 52 Malaysian weeds revealed that most strains are characterized by the pigmented pericarp; however, some weeds have white pericarps, suggesting close relationships to cultivated rice. Phylogenetic analyses indicate that the Rc haplotypes present in Malaysian weeds likely have at least three distinct origins: wild O. rufipogon, white-pericarp cultivated rice, and red-pericarp cultivated rice. These diverse origins contribute to high Rc nucleotide diversity in the Malaysian weeds. Comparison of Rc allelic distributions with other rice domestication genes suggests that functional Rc alleles may confer particular fitness benefits in weedy rice populations, for example, by conferring seed dormancy. This may promote functional Rc introgression from local wild Oryza populations. PMID:27729434

  12. Evaluation of content and estimation of daily intake of cadmium and lead in several varieties of potatoes (Solanum tuberosum L.) cultivated in the Canary Islands (Spain).

    Science.gov (United States)

    Luis, G; Rubio, C; González-Weller, D; Gutiérrez, A J; Revert, C; Hardisson, A

    2014-04-01

    Monitoring the metal content in foods such as potatoes is an important aspect of food safety and regulation. Samples of nine varieties of potatoes (73 samples of local potatoes and 77 samples of imported potatoes) were randomly obtained from supermarkets, farmers markets, and farmer plots in Tenerife (Canary Islands, Spain). The edible portion (pulp) was the only part considered for analysis because Spaniards traditionally eat only peeled potatoes. Cadmium (Cd) and lead (Pb) were determined using graphite furnace atomic absorption spectrometry. Cd concentrations ranged from 0.006 mg/kg in the Cara and Negra varieties to 0.019 mg/kg in the Bonita variety, and Pb concentrations ranged from 0.007 mg/kg in the Up-to-date variety to 0.023 mg/kg in the Recara variety. The mean concentrations of Cd (0.01 mg/kg) and Pb (0.014 mg/kg) were below the limits established by European regulations for potatoes (0.1 mg/kg of wet weight for each metal). Based on a mean consumption of 143.2 g of potato per person per day for the Canary Islands population, the mean daily intakes of Cd (0.015 mg/day) and Pb (0.023 mg/day) were below the legislated respective tolerable weekly intakes. Thus, the samples analyzed were considered safe to eat with regard to the metal concentrations found.

  13. Elemental content of Vietnamese rice. Part 2. Multivariate data analysis.

    Science.gov (United States)

    Kokot, S; Phuong, T D

    1999-04-01

    Rice samples were obtained from the Red River region and some other parts of Vietnam as well as from Yanco, Australia. These samples were analysed for 14 elements (P, K, Mg, Ca, Mn, Zn, Fe, Cu, Al, Na, Ni, As, Mo and Cd) by ICP-AES, ICP-MS and FAAS as described in Part 1. This data matrix was then submitted to multivariate data analysis by principal component analysis to investigate the influences of environmental and crop cultivation variables on the elemental content of rice. Results revealed that geographical location, grain variety, seasons and soil conditions are the most likely significant factors causing changes in the elemental content between the rice samples. To assess rice quality according to its elemental content and physio-biological properties, a multicriteria decision making method (PROMETHEE) was applied. With the Vietnamese rice, the sticky rice appeared to contain somewhat higher levels of nutritionally significant elements such as P, K and Mg than the non-sticky rice. Also, rice samples grown during the wet season have better levels of nutritionally significant mineral elements than those of the dry season, but in general, the wet season seemed to provide better overall elemental and physio-biological rice quality.

  14. Marker-assisted backcrossing: a useful method for rice improvement.

    Science.gov (United States)

    Hasan, Muhammad Mahmudul; Rafii, Mohd Y; Ismail, Mohd R; Mahmood, Maziah; Rahim, Harun A; Alam, Md Amirul; Ashkani, Sadegh; Malek, Md Abdul; Latif, Mohammad Abdul

    2015-03-04

    The world's population is increasing very rapidly, reducing the cultivable land of rice, decreasing table water, emerging new diseases and pests, and the climate changes are major issues that must be addressed to researchers to develop sustainable crop varieties with resistance to biotic and abiotic stresses. However, recent scientific discoveries and advances particularly in genetics, genomics and crop physiology have opened up new opportunities to reduce the impact of these stresses which would have been difficult if not impossible as recently as the turn of the century. Marker assisted backcrossing (MABC) is one of the most promising approaches is the use of molecular markers to identify and select genes controlling resistance to those factors. Regarding this, MABC can contribute to develop resistant or high-yielding or quality rice varieties by incorporating a gene of interest into an elite variety which is already well adapted by the farmers. MABC is newly developed efficient tool by which using large population sizes (400 or more plants) for the backcross F 1 generations, it is possible to recover the recurrent parent genotype using only two or three backcrosses. So far, many high yielding, biotic and abiotic stresses tolerance, quality and fragrance rice varieties have been developed in rice growing countries through MABC within the shortest timeframe. Nowadays, MABC is being used widely in plant breeding programmes to develop new variety/lines especially in rice. This paper reviews recent literature on some examples of variety/ line development using MABC strategy.

  15. Consumers' Preferences for a Local Food Product: The Case of a New Carnaroli Rice Product in Lombardy.

    Science.gov (United States)

    Ferrazzi, Giovanni; Ventura, Vera; Ratti, Sabrina; Balzaretti, Claudia

    2017-04-13

    Italy, with a cultivated area of 218,000 ha, is a European leader of rice production. In particular Lombardy region accounts for 40% of total rice cultivation and the case study in object accounts for 3.2% of Lombardy total rice area (2773 ha). Starting from 2012, through a regional project titled Buono, Sano e Vicino (good, healthy and close), Riso e Rane rural district supported local rice farmers in developing innovation in rice production and promoting an alternative supply chain to increase farmers bargaining power and promote new market strategies. More specifically, the innovation introduced is a new biotech method for variety certification, named DNA controllato (DNA tested). In the first step of the project, the attention was focused on an Italian traditional variety of rice: Carnaroli rice. Thanks to a commercial agreement with one of the most important large retailers in Lombardy, the Riso e Rane rice is offered for sale both in the traditional and wholegrain version. In this context, this work aims to evaluate the determinants of consumer's quality perception of this product, through a preference study of the commercial rice package. Preliminary results reveal that consumers perceive information about origin, local food-system and tradition more easily than DNA tested certification. In conclusion, this work contributes to evaluate the role of bio economy applications to the food sector and offers new insights for the debate about the relationships between tradition and innovation.

  16. Consumers’ preferences for a local food product: the case of a new Carnaroli rice product in Lombardy

    Directory of Open Access Journals (Sweden)

    Giovanni Ferrazzi

    2017-04-01

    Full Text Available Italy, with a cultivated area of 218,000 ha, is a European leader of rice production. In particular Lombardy region accounts for 40% of total rice cultivation and the case study in object accounts for 3.2% of Lombardy total rice area (2773 ha. Starting from 2012, through a regional project titled Buono, Sano e Vicino (good, healthy and close, Riso e Rane rural district supported local rice farmers in developing innovation in rice production and promoting an alternative supply chain to increase farmers bargaining power and promote new market strategies. More specifically, the innovation introduced is a new biotech method for variety certification, named DNA controllato (DNA tested. In the first step of the project, the attention was focused on an Italian traditional variety of rice: Carnaroli rice. Thanks to a commercial agreement with one of the most important large retailers in Lombardy, the Riso e Rane rice is offered for sale both in the traditional and wholegrain version. In this context, this work aims to evaluate the determinants of consumer’s quality perception of this product, through a preference study of the commercial rice package. Preliminary results reveal that consumers perceive information about origin, local food-system and tradition more easily than DNA tested certification. In conclusion, this work contributes to evaluate the role of bio economy applications to the food sector and offers new insights for the debate about the relationships between tradition and innovation.

  17. Introduction and Utilization of INGER Rice Germplasm in China

    Institute of Scientific and Technical Information of China (English)

    TANGSheng-xiang; WEIXing-hua; ELJavier

    2004-01-01

    The International Network for Genetic Evaluation of Rice (INGER) is a global partnership between international and national agricultural research institutions. INGER focuses on worldwide exchange, evaluation and utilization of improved varieties and elite breeding lines of rice. China has actively participated in the activities of INGER since 1980.During the pasted years, 26 500 INGER entries with diversity genetic background have been introduced and evaluated by Chinese scientists. Among of them, 37 commercial varieties directly from elite INGER entries and 27 rice hybrids using INGER lines as their restorer lines/donors have been released to farmers in China. About 1 900 INGER entries were indirectly utilized as cross parents or pest resistant donors in various national and provincial rice breeding programs. Based on the incomplete statistics, there were 14.5 million cumulated hectares planting these varieties and hybrids, from which 5.44 MT of increased rough rice has been received by farmers. INGER accelerates the transfer of adapted varieties and hybrids to farmers, and increases the diversity of rice germplasm in cultivation. Therefore, INGER cooperation has made great benefit both in economy and society in China.

  18. Introduction and Utilization of INGER Rice Germplasm in China

    Institute of Scientific and Technical Information of China (English)

    TANG Sheng-xiang; WEI Xing-hua; E L Javier

    2004-01-01

    The International Network for Genetic Evaluation of Rice (INGER) is a global partnership between international and national agricultural research institutions. INGER focuses on worldwide exchange, evaluation and utilization of improved varieties and elite breeding lines of rice. China has actively participated in the activities of INGER since 1980.During the pasted years, 26 500 INGER entries with diversity genetic background have been introduced and evaluated by Chinese scientists. Among of them, 37 commercial varieties directly from elite INGER entries and 27 rice hybrids using INGER lines as their restorer lines/donors have been released to farmers in China. About 1 900 INGER entries were indirectly utilized as cross parents or pest resistant donors in various national and provincial rice breeding programs. Based on the incomplete statistics, there were 14.5million cumulated hectares planting these varieties and hybrids, from which 5.44 MT of increased rough rice has been received by farmers. INGER accelerates the transfer of adapted varieties and hybrids to farmers, and increases the diversity of rice germplasm in cultivation. Therefore, INGER cooperation has made great benefit both in economy and society in China.

  19. Cultivate in vitro of wheat Anthers (Triticum Aestivum L.) In the ICA-TENZA and PAV -76 varieties; Cultivo In Vitro De Anteras De Trigo (Triticum aestivum L.) EN Las Variedades De Icatenza Y PAVON-76

    Energy Technology Data Exchange (ETDEWEB)

    Manrique O, Olga L

    1994-07-01

    The objective of the present work consisted, in determining the cultivation conditions under which it was possible to induce through the technique of the cultivation of anthers, the callus formation and possible regeneration of green plants of wheat (Triticum aestivum L.) in the varieties ICA-Tenza and Pav -76. With the purpose of identifying the but appropriate state of development of the grain of pollen for the inoculation of the anthers, a cytologic study was made in which was correlation among the moriolic parameters of the plant; (inter liguler distances, auricle-knot distances and longitude of the edges) and the state of development of the microspore; Of the parameters, it was recommended to keep in mind the longitude from the edges when harvesting the experimental material. The anthers of both genotypes were inoculated in the means bases Pope 4 and N6, with hormonal levels of ELL (naftalen acetic acid) of 0.0, 0.5 and 1.0 mg/I. the answers of the genotypes were evaluated before the means of basal cultivation, in connection with the induction of tripes and the plants regeneration. Of the two used genotypes, the Pav -76 it presented bigger capacity to induce the formation of tripes, while the ICA-Tenza genotype presented a bigger answer capacity in the regeneration of plants so much green as albino. The results obtained allowed to establish that a relationship exists between the means of cultivation and the capacity of the genotypes to regenerate as much tripes as plants. Due to the drop survival of the regenerated plants, it was not possible to settle down with clarity a relationship of the ploidia level.

  20. A resistance locus in the American heirloom rice variety Carolina Gold Select is triggered by TAL effectors with diverse predicted targets and is effective against African strains of Xanthomonas oryzae pv. oryzicola.

    Science.gov (United States)

    Triplett, Lindsay R; Cohen, Stephen P; Heffelfinger, Christopher; Schmidt, Clarice L; Huerta, Alejandra I; Tekete, Cheick; Verdier, Valerie; Bogdanove, Adam J; Leach, Jan E

    2016-09-01

    The rice pathogens Xanthomonas oryzae pathovar (pv.) oryzae and pv. oryzicola produce numerous transcription activator-like (TAL) effectors that increase bacterial virulence by activating expression of host susceptibility genes. Rice resistance mechanisms against TAL effectors include polymorphisms that prevent effector binding to susceptibility gene promoters, or that allow effector activation of resistance genes. This study identifies, in the heirloom variety Carolina Gold Select, a third mechanism of rice resistance involving TAL effectors. This resistance manifests through strong suppression of disease development in response to diverse TAL effectors from both X. oryzae pathovars. The resistance can be triggered by an effector with only 3.5 central repeats, is independent of the composition of the repeat variable di-residues that determine TAL effector binding specificity, and is independent of the transcriptional activation domain. We determined that the resistance is conferred by a single dominant locus, designated Xo1, that maps to a 1.09 Mbp fragment on chromosome 4. The Xo1 interval also confers complete resistance to the strains in the African clade of X. oryzae pv. oryzicola, representing the first dominant resistance locus against bacterial leaf streak in rice. The strong phenotypic similarity between the TAL effector-triggered resistance conferred by Xo1 and that conferred by the tomato resistance gene Bs4 suggests that monocots and dicots share an ancient or convergently evolved mechanism to recognize analogous TAL effector epitopes. © 2016 The Authors The Plant Journal © 2016 John Wiley & Sons Ltd.

  1. RICD: A rice indica cDNA database resource for rice functional genomics

    Directory of Open Access Journals (Sweden)

    Zhang Qifa

    2008-11-01

    Full Text Available Abstract Background The Oryza sativa L. indica subspecies is the most widely cultivated rice. During the last few years, we have collected over 20,000 putative full-length cDNAs and over 40,000 ESTs isolated from various cDNA libraries of two indica varieties Guangluai 4 and Minghui 63. A database of the rice indica cDNAs was therefore built to provide a comprehensive web data source for searching and retrieving the indica cDNA clones. Results Rice Indica cDNA Database (RICD is an online MySQL-PHP driven database with a user-friendly web interface. It allows investigators to query the cDNA clones by keyword, genome position, nucleotide or protein sequence, and putative function. It also provides a series of information, including sequences, protein domain annotations, similarity search results, SNPs and InDels information, and hyperlinks to gene annotation in both The Rice Annotation Project Database (RAP-DB and The TIGR Rice Genome Annotation Resource, expression atlas in RiceGE and variation report in Gramene of each cDNA. Conclusion The online rice indica cDNA database provides cDNA resource with comprehensive information to researchers for functional analysis of indica subspecies and for comparative genomics. The RICD database is available through our website http://www.ncgr.ac.cn/ricd.

  2. [Impacts of climate warming on growth period and yield of rice in Northeast China during recent two decades].

    Science.gov (United States)

    Hou, Wen-jia; Geng, Ting; Chen, Qun; Chen, Chang-qing

    2015-01-01

    By using rice growth period, yield and climate observation data during the recent two decades, the impact of climate warming on rice in Northeast China was investigated by mathematical statistics methods. The results indicated that in the three provinces of Northeast China, the average, maximum and minimum temperatures in rice growing season were on the. rise, and the rainfall presented a downward trend during 1989-2009. Compared to 1990s, the rice whole growth periods of Heilongjiang, Jilin and Liaoning provinces in 2000s were prolonged 14 d, 4.5 d and 5.1 d, respectively. The increase of temperature in May, June and September could extend the rice growth period, while that in July would shorten the growth duration. The rice growth duration of registered varieties and experiment sites had a similar increasing trend in Northeast China except for the Heilongjiang Province, and the extension of registered varieties growth period was the main factor causing the prolonged growth period of rice at experiment sites. The change in daily average, minimum and maximum temperatures all could affect the rice yield in Northeast China. The increasing temperature significantly increased the rice yield in Heilongjiang Province, especially in the west region of Sanjiang Plain. Except for the south of Liaoning Province, rice yields in other regions of Northeast China were promoted by increasing temperature. Proper measures for breeding, cultivation and farming, could be adopted to fully improve the adaptation of rice to climate warming in Northeast China.

  3. New Insight into the History of Domesticated Apple: Secondary Contribution of the European Wild Apple to the Genome of Cultivated Varieties

    Science.gov (United States)

    Cornille, Amandine; Gladieux, Pierre; Smulders, Marinus J. M.; Roldán-Ruiz, Isabel; Laurens, François; Le Cam, Bruno; Nersesyan, Anush; Clavel, Joanne; Olonova, Marina; Feugey, Laurence; Gabrielyan, Ivan; Zhang, Xiu-Guo; Tenaillon, Maud I.; Giraud, Tatiana

    2012-01-01

    The apple is the most common and culturally important fruit crop of temperate areas. The elucidation of its origin and domestication history is therefore of great interest. The wild Central Asian species Malus sieversii has previously been identified as the main contributor to the genome of the cultivated apple (Malus domestica), on the basis of morphological, molecular, and historical evidence. The possible contribution of other wild species present along the Silk Route running from Asia to Western Europe remains a matter of debate, particularly with respect to the contribution of the European wild apple. We used microsatellite markers and an unprecedented large sampling of five Malus species throughout Eurasia (839 accessions from China to Spain) to show that multiple species have contributed to the genetic makeup of domesticated apples. The wild European crabapple M. sylvestris, in particular, was a major secondary contributor. Bidirectional gene flow between the domesticated apple and the European crabapple resulted in the current M. domestica being genetically more closely related to this species than to its Central Asian progenitor, M. sieversii. We found no evidence of a domestication bottleneck or clonal population structure in apples, despite the use of vegetative propagation by grafting. We show that the evolution of domesticated apples occurred over a long time period and involved more than one wild species. Our results support the view that self-incompatibility, a long lifespan, and cultural practices such as selection from open-pollinated seeds have facilitated introgression from wild relatives and the maintenance of genetic variation during domestication. This combination of processes may account for the diversification of several long-lived perennial crops, yielding domestication patterns different from those observed for annual species. PMID:22589740

  4. New insight into the history of domesticated apple: secondary contribution of the European wild apple to the genome of cultivated varieties.

    Directory of Open Access Journals (Sweden)

    Amandine Cornille

    Full Text Available The apple is the most common and culturally important fruit crop of temperate areas. The elucidation of its origin and domestication history is therefore of great interest. The wild Central Asian species Malus sieversii has previously been identified as the main contributor to the genome of the cultivated apple (Malus domestica, on the basis of morphological, molecular, and historical evidence. The possible contribution of other wild species present along the Silk Route running from Asia to Western Europe remains a matter of debate, particularly with respect to the contribution of the European wild apple. We used microsatellite markers and an unprecedented large sampling of five Malus species throughout Eurasia (839 accessions from China to Spain to show that multiple species have contributed to the genetic makeup of domesticated apples. The wild European crabapple M. sylvestris, in particular, was a major secondary contributor. Bidirectional gene flow between the domesticated apple and the European crabapple resulted in the current M. domestica being genetically more closely related to this species than to its Central Asian progenitor, M. sieversii. We found no evidence of a domestication bottleneck or clonal population structure in apples, despite the use of vegetative propagation by grafting. We show that the evolution of domesticated apples occurred over a long time period and involved more than one wild species. Our results support the view that self-incompatibility, a long lifespan, and cultural practices such as selection from open-pollinated seeds have facilitated introgression from wild relatives and the maintenance of genetic variation during domestication. This combination of processes may account for the diversification of several long-lived perennial crops, yielding domestication patterns different from those observed for annual species.

  5. Incorporation of disease resistance from Lycopersicon peruvianum L. to cultivated tomatoes, 1: Breeding of new varieties ''Ryugyoku'' etc., having resistance to Fusarium root rot and tobacco mosaic virus inherited from L. peruvianum

    International Nuclear Information System (INIS)

    Yamakawa, K.; Yasui, H.; Mochizuki, T.; Hida, K.; Komochi, S.

    1987-01-01

    Fusarium crown and root rot (FCR) resistance and Tobacco Mosaic Virus (TMV) resistance (Tm-2) of a wild tomato (Lycopersicon peruvianum) were incorporated into cultivated tomatoes (L. esculentum). With this material, F1 hybrid varieties 'Kagyoku, Ryugyoku' and their parental lines 'Tomato parental lines No. 4, -No. 5' were developed. In addition, 'Kagyoku, Ryugyoku' possess Fusarium wild (J1), Nematode (Meloidogyne incognita) and TMV (Tm-2a) resistance introduced from the other varieties. Among the resistances introduced from L. peruvianum, TMV resistance is simply inherited and stable enough. FCR resistance is basically monogenic, but the strong influence of the genetic background hinders the development of FCR resistant varieties with high quality and yield. Whereas 'Ryugyoku' which is highly resistant to FCR has less attractive fruit characters, 'Kagyoku' yields fruits of high quality with a comparatively low FCR resistance. In this report, the breeding process from interspecific hybridization to the development of F1 varieties and the methods of selection applied were described. Also the difficulties which arose in the process of incorporation of the resistance from the wild species were discussed

  6. Effects of shading on starch pasting characteristics of indica hybrid rice (Oryza sativa L..

    Directory of Open Access Journals (Sweden)

    Li Wang

    Full Text Available Rice is an important staple crop throughout the world, but environmental stress like low-light conditions can negatively impact crop yield and quality. Using pot experiments and field experiments, we studied the effects of shading on starch pasting viscosity and starch content with six rice varieties for three years, using the Rapid Visco Analyser to measure starch pasting viscosity. Shading at different growth stages and in different rice varieties all affected the starch pasting characteristics of rice. The effects of shading on starch pasting viscosity at middle and later growth stages were greater than those at earlier stages. Shading enhanced breakdown but reduced hold viscosity and setback at tillering-elongation stage. Most pasting parameters changed significantly with shading after elongation stage. Furthermore, the responses of different varieties to shading differed markedly. The change scope of starch pasting viscosity in Dexiang 4103 was rather small after heading, while that in IIyou 498 and Gangyou 906 was small before heading. We observed clear tendencies in peak viscosity, breakdown, and pasting temperature of the five rice varieties with shading in 2010 and 2011. Correlation analysis indicated that the rice amylose content was negatively correlated with breakdown, but was positively correlated with setback. Based on our results, IIyou 498, Gangyou 906, and Dexiang 4103 had higher shade endurance, making these varieties most suitable for high-quality rice cultivation in low-light regions.

  7. Effects of shading on starch pasting characteristics of indica hybrid rice (Oryza sativa L.).

    Science.gov (United States)

    Wang, Li; Deng, Fei; Ren, Wan-Jun; Yang, Wen-Yu

    2013-01-01

    Rice is an important staple crop throughout the world, but environmental stress like low-light conditions can negatively impact crop yield and quality. Using pot experiments and field experiments, we studied the effects of shading on starch pasting viscosity and starch content with six rice varieties for three years, using the Rapid Visco Analyser to measure starch pasting viscosity. Shading at different growth stages and in different rice varieties all affected the starch pasting characteristics of rice. The effects of shading on starch pasting viscosity at middle and later growth stages were greater than those at earlier stages. Shading enhanced breakdown but reduced hold viscosity and setback at tillering-elongation stage. Most pasting parameters changed significantly with shading after elongation stage. Furthermore, the responses of different varieties to shading differed markedly. The change scope of starch pasting viscosity in Dexiang 4103 was rather small after heading, while that in IIyou 498 and Gangyou 906 was small before heading. We observed clear tendencies in peak viscosity, breakdown, and pasting temperature of the five rice varieties with shading in 2010 and 2011. Correlation analysis indicated that the rice amylose content was negatively correlated with breakdown, but was positively correlated with setback. Based on our results, IIyou 498, Gangyou 906, and Dexiang 4103 had higher shade endurance, making these varieties most suitable for high-quality rice cultivation in low-light regions.

  8. Global estimations of the inventory and mitigation potential of methane emissions from rice cultivation conducted using the 2006 Intergovernmental Panel on Climate Change Guidelines

    Science.gov (United States)

    Yan, Xiaoyuan; Akiyama, Hiroko; Yagi, Kazuyuki; Akimoto, Hajime

    2009-06-01

    The Intergovernmental Panel on Climate Change (IPCC) regularly publishes guidelines for national greenhouse gas inventories and methane emission (CH4) from rice paddies has been an important component of these guidelines. While there have been many estimates of global CH4 emissions from rice fields, none of them have been obtained using the IPCC guidelines. Therefore, we used the Tier 1 method described in the 2006 IPCC guidelines to estimate the global CH4 emissions from rice fields. To accomplish this, we used country-specific statistical data regarding rice harvest areas and expert estimates of relevant agricultural activities. The estimated global emission for 2000 was 25.6 Tg a-1, which is at the lower end of earlier estimates and close to the total emission summarized by individual national communications. Monte Carlo simulation revealed a 95% uncertainty range of 14.8-41.7 Tg a-1; however, the estimation uncertainty was found to depend on the reliability of the information available regarding the amount of organic amendments and the area of rice fields that were under continuous flooding. We estimated that if all of the continuously flooded rice fields were drained at least once during the growing season, the CH4 emissions would be reduced by 4.1 Tg a-1. Furthermore, we estimated that applying rice straw off season wherever and whenever possible would result in a further reduction in emissions of 4.1 Tg a-1 globally. Finally, if both of these mitigation options were adopted, the global CH4 emission from rice paddies could be reduced by 7.6 Tg a-1. Although draining continuously flooded rice fields may lead to an increase in nitrous oxide (N2O) emission, the global warming potential resulting from this increase is negligible when compared to the reduction in global warming potential that would result from the CH4 reduction associated with draining the fields.

  9. Mapping Changes in Area and the Cropping Season of Irrigated Rice in Senegal and Mauritania between 2003 and 2014 Using the PhenoRice Algorithm and MODIS Imagery

    Science.gov (United States)

    Zwart, S.; Busetto, L.; Diagne, M.; Boschetti, M.; Nelson, A.

    2017-12-01

    Government policies have resulted in rapid expansion of irrigated rice area in Mauritania and Senegal through private and public investments. Farmers switch rice cultivation from the wet to the dry season to achieve higher production while rice double cropping is increasingly practiced. As a result Senegal is close to attaining self-sufficiency in the coming years. However, tools to monitor those changes are absent and this inhibits assessments on for example its impact on wetlands located in the delta area, increased water demands and climate induced risks to farmers. In this study we aimed to map changes in irrigated rice area in the wet and dry seasons. We applied the PhenoRice algorithm on a combined time-series of MODIS Aqua and Terra images obtained between 2003 and 2016 to map pixels dominated by rice and determine the start, end and length of the growing season from sowing/transplanting to maturity. Between 2002 and 2010 researchers from the Africa Rice Center interviewed annually around 100 rice farmers located in two irrigation schemes in Senegal. We extracted the reported sowing/transplanting and harvest dates from the data base and used these to validate the estimates obtained by PhenoRice. We also compared the obtained rice areas with official statistics provided by the Senegalese Ministry of Agriculture. Analysis of PhenoRice results highlighted that starting 2008, rice farmers cultivate also during the dry season; the area is steadily increasing from 2008 onwards and in the recent years approximately almost equals that of the wet season. This was confirmed by official statistics, though the total area estimated by PhenoRice is smaller than reported, most likely due to the mismatch between pixel size and the small cultivated areas. However, the algorithm was able to detect the overall trends and inter-annual variations observed in the wet (r2=0.57) and dry season rice cultivated area (r2=0.91). The start of the season, that varied maximally 4 weeks

  10. Growth, Metabolism and Yield of Rice Cultivated in Soils Amended with Fly Ash and Cyanobacteria and Metal Loads in Plant Parts

    OpenAIRE

    Rabindra N. Padhy; Nabakishore Nayak; Rajesh R. Dash-Mohini; Shakti Rath; Rajani K. Sahu

    2016-01-01

    Soil amendment with fly ash (FA) and combined supplementation with N2-fixing cyanobacteria masses as biofertilizer were done in field experiments with rice. Amendments with FA levels, 0, 0.5, 1.0, 2.0, 4.0, 8.0 and 10.0 kg/m2, caused increase in growth and yield of rice up to 8.0 kg/m2, monitored with several parameters. Pigment contents and enzyme activities of leaves were enhanced by FA, with the maximum level of FA at 10.0 kg/m2. Protein content of rice seeds was the highest in plants grow...

  11. TEROIDES THE STUDY OF THE EFFECT OF HIGH AND LOW STARTING TITRE IN THE MODEL ENVIRONMENTS TO CHANGES IN ACTIVE AND TITRATABLE ACIDITY DURING THE CULTIVATION OF WHITE CABBAGE VARIETIES PARUS LACTIC ACID BACTERIA L. LACTIS AND L. MESENTEROIDES

    Directory of Open Access Journals (Sweden)

    V. V. Kondratenko

    2017-01-01

    Full Text Available The aim of the research was to study the dynamics of active and titratable acidity with a low and high initial titer, while cultivating white head cabbage of the variety ‘Parus’ with lactic acid bacteria Leuconostoc lactis VKPM V-12150 and Leuconostoc mesenteroides subsp. mesenteroides VKPM V-8818 in the basic model medium (BMS and the modified model medium (MMC during fermentation . In this experiment, two important questions were considered: the creation of favorable conditions for the growth of lactic acid microorganisms and the suppression of undesirable pathogenic microflora, which can eventually lead to product spoilage. One of the key questions is to scale the results of studies related to the fermentation of plant objects by microorganisms on initially non-sterile raw materials that is the requirement to create as possible fast the conditions that restrain the reproduction of Cl. botulinum, preventing toxin accumulation in the product. Therefore, an important factor is the observance for the necessary boundary condition where for international standards, it reaches pH ≤ 4.6, and for Russian standards it reaches pH ≤ 4.2. Hence, an analysis of the experimental data showed that these boundary conditions were reached after the expiration of essentially different time intervals during the cultivation of microorganisms with different starting titers. As a result, it was shown with which lactic acid microorganisms the optimal parameters for the dynamics of active and titratable acidity were obtained, when the boundary condition reached pH 4.2. Since this value determines more "stringent" requirements for product safety. As a result of studies it was found that optimal parameters for the dynamics of active and titratable acidity when a limit pH value of 4.2 is obtained in the cultivation of lactic acid bacteria L. mesenteroides in the MMC, revealing that the value of the starting titer ranging from 3*103 to 3*105 CFU/g.

  12. STUDIES ON THE EFFECT OF GENOTYPE ON GROWTH AND SEED YIELD IN SOME Camelina sativa L. VARIETIES CULTIVATED UNDER CONTROLLED ENVIRONMENTAL CONDITIONS

    Directory of Open Access Journals (Sweden)

    Emanuela PODGOREANU

    2015-10-01

    Full Text Available The recently emerged interest in using renewable vegetable sources as feedstock for biofuel production requires the identification of effective solutions aimed to follow the principles of sustainable development. Biofuels from the first generation were produced from sugarcane, starch and oils derived from agricultural products, but they may not be sustainable because are competing with the agricultural production. Currently, studies are focused on the obtaining of a second generation of biofuels that originate from plants other then food crops, from agricultural residues and from municipal wastes. Being economically attractive and having certain agro-technical advantages, the Camelina sativa seed oil is considered a sustainable source for obtaining second generation biofuels. The aim of the present research was to record the effect of genotype in 3 foreign varieties of Camelina sativa (CALENA, GP 204 and GP 202 and in 3 autochthonous ones (CAMELIA, one local population Fundulea and one hybrid line as regards both the growth characteristics and the yield components in a greenhouse experiment, in order to evaluate their potential performance and adaptability in field conditions. Periodic phenological observations were performed on the occurrence of flowering, on the pod maturation and genotypic differences of the biometric measurements such as plant height, number of branches, number of pods per plant, number of seeds in pods and thousand seed weight are discussed.

  13. Development of labor saving operation technique by making large scale paddy field and direct seeding cultivation of rice in Tohoku district [Japan], 2: Development of technique for automatic precision laser-levelling system

    International Nuclear Information System (INIS)

    Kimura, S.; Imazono, S.; Yaji, Y.

    1999-01-01

    1) Preparation for large large paddy fields and utilization of direct rice seeding cultivation are expected to be the key technologies for the low cost and labor saving large farm rice cultivation. To achieve this, the technique of land leveling for field operations have to be developed. A precise land leveling operation by a wheel tractor with laser-beam emitter and recover in a wet paddy field are developed. 2) The automatic measurement system of a rice paddy field surface level by a tractor that we developed was highly practical. After measured data ate stored in a memory of hand-held computer the standard deviation of a field height value is shown on the display. Also, measured data are exported to the personal computer and by RC232C, the contour map of the paddy field is draw quickly, which is useful for the land leveling work. 3) Considering the relation between rice seed germination and water depth in the field, the preciseness of the field leveling for direct rice seeding is required to be under 1.5cm of standard deviation (s.d.). To realize this preciseness, a prototype leveling aparatus consisting a laser emitter, a laser receiver and dry land leveler pulled by a tracter, was developed and was tested the performance. The results of land leveling test at a field of 1 ha indicated that the elevation difference of the field of 16cm was improved to that of 92% of +- 2.5cm (1.58cm s.d.) after leveling work. The working efficiency was 0.57hour/10a. For a precise leveling work, the of the soil water content should be under the plastic limitation, under which less amount of soil adoheres to the blade of the leveler. The performance tests of the laser assisted leveling apparatus for a paddy harrowing work revealed that for an accurate operation only a blade should be controlled by a hydraulic cylinder according to a laser beam. Since large amount of soil can not be handled by the apparatus, the leveling for a paddy harrowing work is recommended for a fine leveling

  14. Association analysis of genomic loci important for grain weight control in elite common wheat varieties cultivated with variable water and fertiliser supply.

    Directory of Open Access Journals (Sweden)

    Kunpu Zhang

    Full Text Available Grain weight, an essential yield component, is under strong genetic control and markedly influenced by the environment. Here, by genome-wide association analysis with a panel of 94 elite common wheat varieties, 37 loci were found significantly associated with thousand-grain weight (TGW in one or more environments differing in water and fertiliser levels. Five loci were stably associated with TGW under all 12 environments examined. Their elite alleles had positive effects on TGW. Four, two, three, and two loci were consistently associated with TGW in the irrigated and fertilised (IF, rainfed (RF, reduced nitrogen (RN, and reduced phosphorus (RP environments. The elite alleles of the IF-specific loci enhanced TGW under well-resourced conditions, whereas those of the RF-, RN-, or RP-specific loci conferred tolerance to the TGW decrease when irrigation, nitrogen, or phosphorus were reduced. Moreover, the elite alleles of the environment-independent and -specific loci often acted additively to enhance TGW. Four additional loci were found associated with TGW in specific locations, one of which was shown to contribute to the TGW difference between two experimental sites. Further analysis of 14 associated loci revealed that nine affected both grain length and width, whereas the remaining loci influenced either grain length or width, indicating that these loci control grain weight by regulating kernel size. Finally, the elite allele of Xpsp3152 frequently co-segregated with the larger grain haplotype of TaGW2-6A, suggesting probable genetic and functional linkages between Xpsp3152 and GW2 that are important for grain weight control in cereal plants. Our study provides new knowledge on TGW control in elite common wheat lines, which may aid the improvement of wheat grain weight trait in further research.

  15. Delving deeper into technological innovations to understand differences in rice quality.

    Science.gov (United States)

    Calingacion, Mariafe; Fang, Lu; Quiatchon-Baeza, Lenie; Mumm, Roland; Riedel, Arthur; Hall, Robert D; Fitzgerald, Melissa

    2015-12-01

    Increasing demand for better quality rice varieties, which are also more suited to growth under sub-optimal cultivation conditions, is driving innovation in rice research. Here we have used a multi-disciplinary approach, involving SNP-based genotyping together with phenotyping based on yield analysis, metabolomic analysis of grain volatiles, and sensory panel analysis to determine differences between two contrasting rice varieties, Apo and IR64. Plants were grown under standard and drought-induced conditions. Results revealed important differences between the volatile profiles of the two rice varieties and we relate these differences to those perceived by the sensory panel. Apo, which is the more drought tolerant variety, was less affected by the drought condition concerning both sensory profile and yield; IR64, which has higher quality but is drought sensitive, showed greater differences in these characteristics in response to the two growth conditions. Metabolomics analyses using GCxGC-MS, followed by multivariate statistical analyses of the data, revealed a number of discriminatory compounds between the varieties, but also effects of the difference in cultivation conditions. Results indicate the complexity of rice volatile profile, even of non-aromatic varieties, and how metabolomics can be used to help link changes in aroma profile with the sensory phenotype. Our outcomes also suggest valuable multi-disciplinary approaches which can be used to help define the aroma profile in rice, and its underlying genetic background, in order to support breeders in the generation of improved rice varieties combining high yield with high quality, and tolerance of both these traits to climate change.

  16. Zinco, chumbo e cádmio em plantas de arroz (Oryza Sativa L. cultivadas em solo após adição de resíduo siderúrgico Zinc, lead and cadmium influence in rice plants (Oryza Sativa L. cultivated in soil with addition of siderurgical residue

    Directory of Open Access Journals (Sweden)

    André Fernão Martins de Andrade

    2008-10-01

    horizon of an Entisol, from Pinheiral municipality, State of Rio de Janeiro, and the rice (Oryza Sativa L. variety utilized was the "BRS Curinga". There were applied four dosages of residue (94; 281; 844 and 2531kg ha-1 plus the testimony, without residue. The amount of zinc, cadmium and lead was determined in the root and aerial part of the rice plants. The plants cultivated in the A horizon of the Entisol presented the biggest dry biomass production, the highest zinc accumulation, and the smallest cadmium level. The plants cultivated in the Oxisol B horizon had the smallest dry biomass production, lowest zinc accumulation, and the highest level of lead. As for the Oxisol A horizon, the rice plants showed a good dry biomass production. The zinc and lead concentrated, mainly, in the roots; and cadmium in the aerial part. Based on the characteristics of the studied soils, and the fitotoxicity by lead showed in the rice plants grown on the Oxisol B horizon, the application of the siderurgical residue, is not recommended, as a zinc source for the rice crop.

  17. Free and Bound Phenolic Compound Content and Antioxidant Activity of Different Cultivated Blue Highland Barley Varieties from the Qinghai-Tibet Plateau.

    Science.gov (United States)

    Yang, Xi-Juan; Dang, Bin; Fan, Ming-Tao

    2018-04-11

    In this study, the polyphenols composition and antioxidant properties of 12 blue highland barley varieties planted on the Qinghai-Tibet Plateau area were measured. The contents of the free, bound and total phenolic acids varied between 166.20-237.60, 170.10-240.75 and 336.29-453.94 mg of gallic acid equivalents per 100 g of dry weight (DW) blue highland barley grains, while the free and bound phenolic acids accounted for 50.09% and 49.91% of the total phenolic acids, respectively. The contents of the free, bound and total flavones varied among 20.61-25.59, 14.91-22.38 and 37.91-47.98 mg of catechin equivalents per 100 g of dry weight (DW) of blue highland barley grains, while the free and bound flavones accounted for 55.90% and 44.10% of the total flavones, respectively. The prominent phenolic compounds in the blue hulless barley grains were gallic acid, benzoic acid, syringic acid, 4-coumaric acid, naringenin, hesperidin, rutin, (+)-catechin and quercetin. Among these, protocatechuic acid, chlorogenic acid and (+)-catechin were the major phenolic compounds in the free phenolics extract. The most abundant bound phenolics were gallic acid, benzoic acid, syringic acid, 4-coumaric acid, benzoic acid, dimethoxybenzoic acid, naringenin, hesperidin, quercetin and rutin. The average contribution of the bound phenolic extract to the DPPH • free radical scavenging capacity was higher than 86%, that of free phenolic extract to the ABTS •+ free radical scavenging capacity was higher than 79%, and that of free phenolic (53%) to the FRAP antioxidant activity was equivalent to that of the bound phenol extract (47%). In addition, the planting environment exerts a very important influence on the polyphenol composition, content and antioxidant activity of blue highland barley. The correlation analysis showed that 2,4-hydroxybenzoic acid and protocatechuic acid were the main contributors to the DPPH • and ABTS •+ free radical scavenging capacity in the free phenolic extract

  18. The Emissions of Carbon Dioxide, Methane, and Nitrous Oxide during Winter without Cultivation in Local Saline-Alkali Rice and Maize Fields in Northeast China

    Directory of Open Access Journals (Sweden)

    Hao Zhang

    2017-10-01

    Full Text Available Agricultural ecosystems are important contributors to atmospheric greenhouse gasses (GHGs; however, in situ winter emission data in saline-alkali fields are scarce. Gas samples were collected during different periods, from three rice (R1–R3 and three maize (M1–M3 fields with different soil pH levels and salinity conditions. Carbon dioxide (CO2 emissions in the rice and maize fields decreased with decreasing temperature during the freezing period and increased with the rising temperature during the thawing period, with the majority of winter CO2 emissions occurring during these two periods. Peaks in methane (CH4 emissions were observed during the freezing period in the rice fields and during the snow-melting period in the rice and maize fields. CH4 emissions in the rice fields and CH4 uptake rates in the maize fields were significantly (P < 0.05 related to surface soil temperature. Nitrous oxide (N2O emissions remained relatively low, except for during the peaks observed during the snow-melting period in both the rice and maize fields, leading to the high GHG contribution of the snow-melting period throughout the winter. Higher pH and salinity conditions consistently resulted in lower CO2, CH4, and N2O emissions, CH4 uptake, and lower global warming potential (GWP. These results can contribute to the assessment of the GWP during winter in saline-alkali regions.

  19. Efficiency for solar energy conversion in rice population estimated from crop photosynthesis and respiration under field conditions (Part 1). Ratio of respiration to photosynthesis during the ripening stage. [Effect of planting data, heading time, variety, etc

    Energy Technology Data Exchange (ETDEWEB)

    Imaki, Tadashi; Ishizuka, Hitoshi; Hayakawa, Junji

    1987-12-21

    According to the results of measuring crop photosynthesis and respiration of rice population, a comparative experiment on the variations of the ratio of respiration to photosynthesis (R/P ratio) due to the difference of the rice planting time or the heading time was carried out using extremely early-maturing and early or medium-maturing varieties. On the measured data of photosynthesis and respiration which were observed with change of the growth, the R/P ratio were obtained twenty days before to thirty days after the heading time. As the results, it was found that the R/P ratio of the group with the heading time at the end of July was about 10 to 20 % higher than that of another group with the heading time after middle of August. This means that the apparent energy conversion efficiency may be affected by the differences of the planting time, the heading time and the temperature condition. Hitherto, in determination of the rice-planting time, quantity of solar radiation in the growth and ripening stages was apt to be regarded as important. However, in consideration of true suitable planting time, the study from the aspect of the energy conversion efficiency is also required. (7 figs, 9 tabs, 8 refs)

  20. A built-in mechanism to mitigate the spread of insect-resistance and herbicide-tolerance transgenes into weedy rice populations.

    Directory of Open Access Journals (Sweden)

    Chengyi Liu

    Full Text Available BACKGROUND: The major challenge of cultivating genetically modified (GM rice (Oryza sativa at the commercial scale is to prevent the spread of transgenes from GM cultivated rice to its coexisting weedy rice (O. sativa f. spontanea. The strategic development of GM rice with a built-in control mechanism can mitigate transgene spread in weedy rice populations. METHODOLOGY/PRINCIPAL FINDINGS: An RNAi cassette suppressing the expression of the bentazon detoxifying enzyme CYP81A6 was constructed into the T-DNA which contained two tightly linked transgenes expressing the Bt insecticidal protein Cry1Ab and the glyphosate tolerant 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS, respectively. GM rice plants developed from this T-DNA were resistant to lepidopteran pests and tolerant to glyphosate, but sensitive to bentazon. The application of bentazon of 2000 mg/L at the rate of 40 mL/m(2, which is approximately the recommended dose for the field application to control common rice weeds, killed all F(2 plants containing the transgenes generated from the Crop-weed hybrids between a GM rice line (CGH-13 and two weedy rice strains (PI-63 and PI-1401. CONCLUSIONS/SIGNIFICANCE: Weedy rice plants containing transgenes from GM rice through gene flow can be selectively killed by the spray of bentazon when a non-GM rice variety is cultivated alternately in a few-year interval. The built-in control mechanism in combination of cropping management is likely to mitigate the spread of transgenes into weedy rice populations.

  1. A Built-In Mechanism to Mitigate the Spread of Insect-Resistance and Herbicide-Tolerance Transgenes into Weedy Rice Populations

    Science.gov (United States)

    Liu, Chengyi; Li, Jingjing; Gao, Jianhua; Shen, Zhicheng; Lu, Bao-Rong; Lin, Chaoyang

    2012-01-01

    Background The major challenge of cultivating genetically modified (GM) rice (Oryza sativa) at the commercial scale is to prevent the spread of transgenes from GM cultivated rice to its coexisting weedy rice (O. sativa f. spontanea). The strategic development of GM rice with a built-in control mechanism can mitigate transgene spread in weedy rice populations. Methodology/Principal Findings An RNAi cassette suppressing the expression of the bentazon detoxifying enzyme CYP81A6 was constructed into the T-DNA which contained two tightly linked transgenes expressing the Bt insecticidal protein Cry1Ab and the glyphosate tolerant 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS), respectively. GM rice plants developed from this T-DNA were resistant to lepidopteran pests and tolerant to glyphosate, but sensitive to bentazon. The application of bentazon of 2000 mg/L at the rate of 40 mL/m2, which is approximately the recommended dose for the field application to control common rice weeds, killed all F2 plants containing the transgenes generated from the Crop-weed hybrids between a GM rice line (CGH-13) and two weedy rice strains (PI-63 and PI-1401). Conclusions/Significance Weedy rice plants containing transgenes from GM rice through gene flow can be selectively killed by the spray of bentazon when a non-GM rice variety is cultivated alternately in a few-year interval. The built-in control mechanism in combination of cropping management is likely to mitigate the spread of transgenes into weedy rice populations. PMID:22359609

  2. Using NOAA/AVHRR based remote sensing data and PCR method for estimation of Aus rice yield in Bangladesh

    Science.gov (United States)

    Nizamuddin, Mohammad; Akhand, Kawsar; Roytman, Leonid; Kogan, Felix; Goldberg, Mitch

    2015-06-01

    Rice is a dominant food crop of Bangladesh accounting about 75 percent of agricultural land use for rice cultivation and currently Bangladesh is the world's fourth largest rice producing country. Rice provides about two-third of total calorie supply and about one-half of the agricultural GDP and one-sixth of the national income in Bangladesh. Aus is one of the main rice varieties in Bangladesh. Crop production, especially rice, the main food staple, is the most susceptible to climate change and variability. Any change in climate will, thus, increase uncertainty regarding rice production as climate is major cause year-to-year variability in rice productivity. This paper shows the application of remote sensing data for estimating Aus rice yield in Bangladesh using official statistics of rice yield with real time acquired satellite data from Advanced Very High Resolution Radiometer (AVHRR) sensor and Principal Component Regression (PCR) method was used to construct a model. The simulated result was compared with official agricultural statistics showing that the error of estimation of Aus rice yield was less than 10%. Remote sensing, therefore, is a valuable tool for estimating crop yields well in advance of harvest, and at a low cost.

  3. Improvement of rice varieties by induced mutations to increase yield per acre and resistance to diseases and to improve seed quality

    Energy Technology Data Exchange (ETDEWEB)

    Miah, A J; Bhatti, I M; Awan, A; Bari, G [Atomic Energy Agricultural Research Centre, Tandojam (Pakistan)

    1970-03-01

    Mutagen treatments of the variety Kangni-27 have given rise to short culm and early ripening strains. Experiments have been started with the varieties Dokri Basmati, Jajai-77, IR-8 and 370 Basmati using fast neutrons, gamma rays, EMS and dES as mutagens. Results obtained so far show a differential response of the varieties in their radiosensitivity and frequency of leaf colour mutations. (author)

  4. The perspective effects of various seed coating substances on rice seed variety Khao Dawk Mali 105 storability II: the case study of chemical and biochemical properties.

    Science.gov (United States)

    Thobunluepop, P; Pan-in, W; Pawelzik, E; Vearasilp, S

    2009-04-01

    The aim of this study was to investigate the effects of seed coating substances; chemical fungicide (CA) and biological fungicide polymers [chitosan-lignosulphonate polymer (CL) and eugenol incorporated into chitosan-lignosulphonate polymer (E+CL)] on chemical and biochemical changes of rice seeds cv. KDML 105, which have been studied during storage for 12 months. CA significantly affected the rice seed chemical properties and the associated seed deterioration. After 12 months storage, protein content decreased accompanied by declined of lipid content, increased free fatty acids and activated lipoxygenase enzyme. In the case of biological fungicide coated seeds, the antioxidative scavenging enzymes were ascorbate peroxidase and superoxide dismutase and a high antioxidant activity protected them. Moreover, the sugar content was positive correlated with seed germination and vigor. The biological coated seeds were found to maintain high sugar contents inside the seeds, which resulted high seed storability significantly. In contrast, under fungicide stress (CA), those compounds were lost that directly affected seed vigor during storage.

  5. Fate of 15N-Urea and 15N-Ammonia sulfate applied in different times to rice crops, variety CICA-8, under greenhouse conditions

    International Nuclear Information System (INIS)

    Bastidas, O.G.; Alvarez, A.L.; Victoria, R.L.; Muraoka, T.; Urquiaga, S.

    1986-01-01

    This research project deals with the end use of two nitrogen fertilizers applied to a rice crop. The experiment was carried out in a greenhouse, using Urea(1.973% N 15 atom content)and Ammonia Sulfate(1.826% N 15 atom content). Fertilizers were applied in four levels (0 to 300 Kg/ha) at sowing and 30 days after budding on flower pots containing 30 Kg. of soil. Results indicate that production of dry vegetable material presents no significant differences in regard to application time or nitrogen source, but it does in relation to applied levels the efficiency in fertilizers use changed between 16 and 54%, showing differences highly significant, in relation to source, level and specially time of application. At the end of the experiment, in the plant-soil system, about 39% to 81% of the applied nitrogen was recuperated, given higher losses when Urea was as a source, and depending on the time of application. (author)

  6. Transcriptome Analysis of Two Rice Varieties Contrasting for Nitrogen Use Efficiency under Chronic N Starvation Reveals Differences in Chloroplast and Starch Metabolism-Related Genes

    Directory of Open Access Journals (Sweden)

    Subodh Kumar Sinha

    2018-04-01

    Full Text Available The nitrogen use efficiency (NUE of crop plants is limited and enhancing it in rice, a major cereal crop, would be beneficial for farmers and the environment alike. Here we report the genome-wide transcriptome analysis of two rice genotypes, IR 64 (IR64 and Nagina 22 (N22 under optimal (+N and chronic starvation (-N of nitrogen (N from 15-day-old root and shoot tissues. The two genotypes were found to be contrasting in their response to -N; IR64 root architecture and root dry weight remained almost equivalent to that under +N conditions, while N22 showed high foraging ability but a substantial reduction in biomass under -N. Similarly, the photosynthetic pigments showed a drastic reduction in N22 under low N, while IR64 was more resilient. Nitrate reductase showed significantly low specific activity under -N in both genotypes. Glutamate synthase (GOGAT and citrate synthase CS activity were highly reduced in N22 but not in IR64. Transcriptome analysis of these genotypes revealed nearly double the number of genes to be differentially expressed (DEGs in roots (1016 compared to shoots (571. The response of the two genotypes to N starvation was distinctly different reflecting their morphological/biochemical response with just two and eight common DEGs in the root and shoot tissues. There were a total of 385 nitrogen-responsive DEGs (106 in shoots and 279 in roots between the two genotypes. Fifty-two of the 89 DEGs identified as specific to N22 root tissues were also found to be differentially expressed between the two genotypes under -N. Most of these DEGs belonged to starch and chloroplast metabolism, followed by membrane and signaling proteins. Physical mapping of DEGs revealed 95 DEGs in roots and 76 in shoots to be present in quantitative trait loci (QTL known for NUE.

  7. Determinación de la Infección de Burkholderia glumae en Semillas de Variedades Comerciales Colombianas de Arroz Determination of the Infeccion of Burkholderia glumae in Comercial Colombian Rice Varieties

    Directory of Open Access Journals (Sweden)

    Nathalia María Vanesa Flórez Zapata

    2011-12-01

    Full Text Available El añublo bacterial de la panícula del arroz, ocasionado por Burkholderia glumae, es una enfermedad cada vez más difundida en Colombia. Por tal motivo es importante implementar un sistema de evaluación de la infección de este agente fitopatógeno en semilla, ya que ésta es una de las posibles fuentes de la enfermedad en campo. Semillas previamente desinfectadas, fueron sumergidas en suspensiones bacterianas y colocadas en cámara húmeda por siete días, luego de los cuales fueron evaluadas. Este sistema fue validado a través del análisis de la severidad de la infección en siete variedades de arroz y tres concentraciones del patógeno. El análisis reveló que las variedades F60, Panorama y F174, presentaron la menor severidad de la infección, aunque estadísticamente similar entre sí; mientras que, las variedades F369 y F733 presentaron niveles de severidad significativamente mayores y similares entre sí. Todas las variedades, con excepción de F60, presentaron diferencias entre las concentraciones del patógeno evaluadas, encontrándose una relación positiva entre concentración del inóculo y la severidad, la cual osciló según la variedad en la que fue estimada. Se concluyó que el modelo de evaluación de la infección fue exitoso dado que permitió encontrar diferencias en la severidad de la infección entre las variedades de arroz y las concentraciones de inóculo.The bacterial panicle blight of rice caused by Burkholderia glumae, is a disease that has gained increasing distribution in Colombia. Therefore it is important to implement an assessment system of infection of this phytopathogen in seeds, since this is one of the possible disease sources on the field. Thus, previously disinfected seeds were dipped in the bacterial suspension and placed in a moist chamber for 7 days, after which they were assessed. This assessment system, was validated by analyzing the infection severity level on seven rice varieties and three

  8. Proposal of a growth chamber for growing Super-Dwarf Rice in Space Agriculture

    Science.gov (United States)

    Hirai, Hiroaki; Kitaya, Yoshiaki; Tsukamoto, Koya; Yamashita, Youichirou; Hirai, Takehiro

    Space agriculture needs to be considered to supply food for space crew who stay in space over an extended time period. So far crops such as wheat, onion, oat, pea and lettuce grew to explore the possibility of space agriculture. Although rice is a staple food for most of the world, research on rice cultivation in space has not been done much. Rice grains are nutrient-rich with carbohydrate, protein and dietary fiber. Moreover, rice is a high yield crop and harvested grains have a long shelf life. However, the plant height of standard rice cultivars is relatively long, requiring much space. In addition, rice plants require higher light intensities for greater yield. For these reasons, it is difficult to establish facilities for rice culture in a limited space with a low cost. We propose to employee a super-dwarf cultivar and a small growth chamber with a new type of LEDs. The super-dwarf rice is a short-grain japonica variety and the plant height is approximately 20 cm that is one-fifth as tall as standard cultivars. The LED light used as a light source for this study can provide full spectrum of 380 nm to 750 nm. Air temperature and humidity were controlled by a Peltier device equipped in the chamber. The characteristics of the new type of LEDs and other equipments of the chamber and the ground based performance of super-dwarf rice plants grown in the chamber will be reported.

  9. The Birth of a Black Rice Gene and Its Local Spread by Introgression.

    Science.gov (United States)

    Oikawa, Tetsuo; Maeda, Hiroaki; Oguchi, Taichi; Yamaguchi, Takuya; Tanabe, Noriko; Ebana, Kaworu; Yano, Masahiro; Ebitani, Takeshi; Izawa, Takeshi

    2015-09-01

    The origin and spread of novel agronomic traits during crop domestication are complex events in plant evolution. Wild rice (Oryza rufipogon) has red grains due to the accumulation of proanthocyanidins, whereas most cultivated rice (Oryza sativa) varieties have white grains induced by a defective allele in the Rc basic helix-loop-helix (bHLH) gene. Although the events surrounding the origin and spread of black rice traits remain unknown, varieties with black grains due to anthocyanin accumulation are distributed in various locations throughout Asia. Here, we show that the black grain trait originated from ectopic expression of the Kala4 bHLH gene due to rearrangement in the promoter region. Both the Rc and Kala4 genes activate upstream flavonol biosynthesis genes, such as chalcone synthase and dihydroflavonol-4-reductase, and downstream genes, such as leucoanthocyanidin reductase and leucoanthocyanidin dioxygenase, to produce the respective specific pigments. Genome analysis of 21 black rice varieties as well as red- and white-grained landraces demonstrated that black rice arose in tropical japonica and its subsequent spread to the indica subspecies can be attributed to the causal alleles of Kala4. The relatively small size of genomic fragments of tropical japonica origin in some indica varieties indicates that refined introgression must have occurred by natural crossbreeding in the course of evolution of the black trait in rice. © 2015 American Society of Plant Biologists. All rights reserved.

  10. Fate of /sup 15/N-Urea and /sup 15/N-Ammonia sulfate applied in different times to rice crops, variety CICA-8, under greenhouse conditions

    Energy Technology Data Exchange (ETDEWEB)

    Bastidas, O G; Alvarez, A L; Victoria, R L; Muraoka, T; Urquiaga, S

    1986-01-01

    This research project deals with the end use of two nitrogen fertilizers applied to a rice crop. The experiment was carried out in a greenhouse, using urea (1.973% N/sup 15/ atom content) and ammonia sulfate (1.826% N/sup 15/atom content). Fertilizers were applied in four levels (0 to 300 Kg/ha) at sowing and 30 days after budding on flower pots containing 30 Kg. of soil. Results indicate that production of dry vegetable material presents no significant differences in regard to application time or nitrogen source, but it does in relation to applied levels. The efficiency in fertilizers use changed between 16 and 54%, showing highly significant differences, in relation to source, level and time of application. At the end of the experiment, in the plant-soil system, about 39% to 81% of the applied nitrogen was recovered, given higher losses when urea was as a source, and depending on the time of application.

  11. The perspective effects of various seed coating substances on rice seed variety Khao DAWK Mali 105 storability I: the case study of physiological properties.

    Science.gov (United States)

    Thobunluepop, P; Pawelzik, E; Vearasilp, S

    2008-10-01

    This study aimed to evaluate the perspective changes of several physiological performances of rice seeds cv. KDML 105 which were coated with various seed coating substances [chemical fungicide, captan (CA) and biological coating polymers; chitosan-lignosulphonate polymer (CL) and eugenol incorporated into chitosan-lignosulphonate polymer (E + CL)] during storage (12 months). CA significantly increased seed moisture content and seed water activity through out the storage period. The qualities and viability of the seeds were seriously declined by this treatment. Moreover, CA inhibited the shoot and root development, seedling dry weight accumulation, delayed the seed germination and seedling growth rate. CA treated seeds were susceptible to stress conditions that declined the seed germination potential under cold, high moisture and temperature stress conditions. Nevertheless, CL and E + CL coating polymer could maintain seed storability, which significantly improved seed germination and seedling performances. These improvements were attributed to maintain the nutritive reserve and dehydrogenase activity in seeds. Moreover, the biological seed treatment stimulated the embryo growth and so speeding up the seedling emergence when compared untreated seeds.

  12. Induction of drought tolerant mutants of rice

    International Nuclear Information System (INIS)

    El-Hissewy, A.A.; Abd Allah, A.

    2001-01-01

    The ultimate goal of crop breeding is to develop varieties with a high yield potential and desirable agronomic characteristics. In Egypt, the most important qualities sought by breeders have been high yield potential, resistance to major diseases and insects, and improved grain and eating quality. However, breeding efforts should concentrate on varieties with the potential to minimize yield losses under unfavorable conditions such as drought, and to maximize yields when conditions are favorable. Rice (Oryza sativa L.) in Egypt is completely irrigated and a significant portion of the rice cultivated area is subject to water deficit resulting from an inadequate or insufficient irrigation supply. Drought tolerance is a complex trait in that it results from the interaction of histological and physiological characters of plant with environmental factors, both above-ground and under-ground. Accordingly, root characters are closely related to drought tolerance. Little attention has been paid in Egyptian breeding programs to root characters and their relation to shoot characters. Furthermore, induced mutations are considered as one of the most important methods to induce useful mutants, especially with improved root characters, to overcome the drought problem. The present investigation aimed to study the effect of different doses of gamma rays on several characters of three Egyptian rice varieties, i.e. 'Giza 171', 'Giza 175' and 'Giza 176' and to induce one or more mutants possessing drought tolerance

  13. Growth, Metabolism and Yield of Rice Cultivated in Soils Amended with Fly Ash and Cyanobacteria and Metal Loads in Plant Parts

    Directory of Open Access Journals (Sweden)

    Rabindra N. Padhy

    2016-01-01

    Full Text Available Soil amendment with fly ash (FA and combined supplementation with N2-fixing cyanobacteria masses as biofertilizer were done in field experiments with rice. Amendments with FA levels, 0, 0.5, 1.0, 2.0, 4.0, 8.0 and 10.0 kg/m2, caused increase in growth and yield of rice up to 8.0 kg/m2, monitored with several parameters. Pigment contents and enzyme activities of leaves were enhanced by FA, with the maximum level of FA at 10.0 kg/m2. Protein content of rice seeds was the highest in plants grown at FA level 4.0 kg/m2. Basic soil properties, pH value, percentage of silt, percentage of clay, water-holding capacity, electrical conductivity, cation exchange capacity, and organic carbon content increased due to the FA amendment. Parallel supplementation of FA amended plots with 1.0 kg/m2 N2-fixing cyanobacteria mass caused further significant increments of the most soil properties, and rice growth and yield parameters. 1000-grain weight of rice plants grown at FA level 4.0 kg/m2 along with cyanobacteria supplementation was the maximum. Cyanobacteria supplementation caused increase of important basic properties of soil including the total N-content. Estimations of elemental content in soils and plant parts (root and seed were done by the atomic absorption spectrophotometry. Accumulations of K, P, Fe and several plant micronutrients (Mn, Ni, Co, Zn and Cu and toxic elements (Pb, Cr and Cd increased in soils and plant parts as a function of the FA gradation, but Na content remained almost unchanged in soils and seeds. Supplementation of cyanobacteria had ameliorating effect on toxic metal contents of soils and plant parts. The FA level 4.0 kg/m2, with 1.0 kg/m2 cyanobacteria mass supplementation, could be taken ideal, since there would be recharging of the soil with essential micronutrients as well as toxic chemicals in comparative lesser proportions, and cyanobacteria mass would cause lessening toxic metal loads with usual N2-fixation.

  14. SALINITY TOLERANCE OF SEVERAL RICE GENOTYPES AT SEEDLING STAGE

    Directory of Open Access Journals (Sweden)

    Heni Safitri

    2018-01-01

    Full Text Available Salinity is one of the most serious problems in rice cultivation. Salinity drastically reduced plant growth and yield, especially at seedling stage. Several rice genotypes have been produced, but their tolerance to salinity has not yet been evaluated. The study aimed to evaluate salinity tolerance of rice genotypes at seedling stage. The glasshouse experiment was conducted at Cimanggu Experimental Station, Bogor, from April to May 2013. Thirteen rice genotypes and two check varieties, namely Pokkali (salt tolerant and IR29 (salt sensitive were tested at seedling stage. The experiment was arranged in a randomized complete block design with three replications and two factors, namely the levels of NaCl (0 and 120 mM and 13 genotypes of rice. Rice seedlings were grown in the nutrient culture (hydroponic supplemented with NaCl at different levels. The growth and salinity injury levels of the genotypes were recorded periodically. The results showed that salinity level of 120 mM NaCl reduced seedling growth of all rice genotypes, but the tolerant ones were survived after 14 days or until the sensitive check variety died. Based on the visual injury symptoms on the leaves, five genotypes, i.e. Dendang, Inpara 5, Inpari 29, IR77674-3B-8-2-2-14-4-AJY2, and IR81493-BBB-6-B- 2-1-2 were tolerant to 120 mM salinity level, while Inpara 4 was comparable to salt sensitive IR29. Hence, Inpara 4 could be used as a salinity sensitive genotype for future research of testing tolerant variety. Further evaluation is needed to confirm their salinity tolerance under field conditions. 

  15. Phylogeography of Asian wild rice, Oryza rufipogon: a genome-wide view.

    Science.gov (United States)

    Huang, Pu; Molina, Jeanmaire; Flowers, Jonathan M; Rubinstein, Samara; Jackson, Scott A; Purugganan, Michael D; Schaal, Barbara A

    2012-09-01

    Asian wild rice (Oryza rufipogon) that ranges widely across the eastern and southern part of Asia is recognized as the direct ancestor of cultivated Asian rice (O. sativa). Studies of the geographic structure of O. rufipogon, based on chloroplast and low-copy nuclear markers, reveal a possible phylogeographic signal of subdivision in O. rufipogon. However, this signal of geographic differentiation is not consistently observed among different markers and studies, with often conflicting results. To more precisely characterize the phylogeography of O. rufipogon populations, a genome-wide survey of unlinked markers, intensively sampled from across the entire range of O. rufipogon is critical. In this study, we surveyed sequence variation at 42 genome-wide sequence tagged sites (STS) in 108 O. rufipogon accessions from throughout the native range of the species. Using Bayesian clustering, principal component analysis and amova, we conclude that there are two genetically distinct O. rufipogon groups, Ruf-I and Ruf-II. The two groups exhibit a clinal variation pattern generally from north-east to south-west. Different from many earlier studies, Ruf-I, which is found mainly in China and the Indochinese Peninsula, shows genetic similarity with one major cultivated rice variety, O. satvia indica, whereas Ruf-II, mainly from South Asia and the Indochinese Peninsula, is not found to be closely related to cultivated rice varieties. The other major cultivated rice variety, O. sativa japonica, is not found to be similar to either O. rufipogon groups. Our results support the hypothesis of a single origin of the domesticated O. sativa in China. The possible role of palaeoclimate, introgression and migration-drift balance in creating this clinal variation pattern is also discussed. © 2012 Blackwell Publishing Ltd.

  16. Signatures of adaptation in the weedy rice genome

    Science.gov (United States)

    Weedy rice is a common problem of by product of domestication that has evolved multiple times from cultivated and wild rice relatives. Here we use whole genome sequences to examine the origin and adaptation of the two major US weedy red rice strains, with a comparison to Chinese weedy red rice. We f...

  17. Engineering the lodging resistance mechanism of post-Green Revolution rice to meet future demands.

    Science.gov (United States)

    Hirano, Ko; Ordonio, Reynante Lacsamana; Matsuoka, Makoto

    2017-01-01

    Traditional breeding for high-yielding rice has been dependent on the widespread cultivation of gibberellin (GA)-deficient semi-dwarf varieties. Dwarfism lowers the "center of gravity" of the plant body, which increases resistance against lodging and enables plants to support high grain yield. Although this approach was successful in latter half of the 20th century in rice and wheat breeding, this may no longer be enough to sustain rice with even higher yields. This is because relying solely on the semi-dwarf trait is subject to certain limitations, making it necessary to use other important traits to reinforce it. In this review, we present an alternative approach to increase lodging resistance by improving the quality of the culm by identifying genes related to culm quality and introducing these genes into high-yielding rice cultivars through molecular breeding technique.

  18. AFLP analysis of rice transformed with maize DNA by particle beam

    International Nuclear Information System (INIS)

    Ji Shengdong; Chen Peng; Wang Jiachuan; Yuan Zhao; Yue Chunhui; Wang Zhifeng

    2009-01-01

    Many stable heritable rice lines were obtained via five years agricultural selection, which were derived from rice (oryza stative Japonica) Yujing-6 transgened with large fraction DNA of Zhengdan-14 (zea mays L.) by particle beam method. 18 pairs optimum selective primers were got by screening from 64 pairs AFLP selective primers via experiment on two mutant lines, which could amplify many DNA fingerprints and also could amplify polymorphic bands and target bands, both in this two mutant lines. Then the two mutant lines and two controls were analyzed with AFLP, the results showed that many polymorphic bands (such as novel bands, target bands, missing bands) were found in mutant lines. The discrepancy in DNA level indicated that rice, transgened with large fraction DNA of Zhengdan-14 by particle beam, might be inserted maize DNA and inherited steadily in some degree. It also indicated that it was possible to cultivate novel rice variety transformed with wide DNA by particle beam. (authors)

  19. Influence of the agrochemicals used for rice and vegetable cultivation on insecticide resistance in malaria vectors in southern Côte d'Ivoire.

    Science.gov (United States)

    Chouaïbou, Mouhamadou S; Fodjo, Behi K; Fokou, Gilbert; Allassane, Ouattara F; Koudou, Benjamin G; David, Jean-Philippe; Antonio-Nkondjio, Christophe; Ranson, Hilary; Bonfoh, Bassirou

    2016-08-24

    Vector control can contribute to the development of resistance to insecticides in malaria vectors. As the swamps and wetlands used for some agricultural activities constitute productive breeding sites for many mosquito species, agricultural pest control may increase the selection pressure for insecticide resistance in mosquitoes. Understanding the use of agrochemicals by farmers is important to plan and initiate effective integrated pest and vector management interventions. A knowledge-attitude-practice study, using questionnaires, was undertaken with 102 rice farmers in Tiassalé and 106 vegetable farmers in Dabou (South Côte d'Ivoire) in order to generate information on pesticide usage. In addition, insecticide susceptibility bioassays were conducted using adult mosquitoes obtained from larvae collected within farms, and the persistence of agricultural pesticides in the farming environment, including sediment and mosquito breeding site water, was investigated by HPLC. Herbicides and insecticides appeared to be the most frequently used pesticides for both crops. Amino phosphonates (mostly glyphosate) represented the most used herbicides (45 % for rice up to 89 % for vegetables). Pyrethroids appeared to be the most used insecticides (accounting for 90 % of all the insecticide use reported). Approximately 75 % of respondents had not been to school and do not understand product labels. Only about 45 % of farmers respect the recommended pesticide dosage and about 10-15 % of pesticides used for rice and vegetable, respectively, are not recommended for these crops. As per WHO criteria, the mosquito local populations from the two localities were resistant to three of the four insecticides tested, as mortalities were less than 35 % for deltamethrin, DDT and bendiocarb. Higher susceptibility was observed for malathion, although the population was considered resistant in Dabou (80 % mortality) and susceptible in Tiassalé (98 % mortality). With the exception of

  20. Crop and varietal diversification of rainfed rice based cropping systems for higher productivity and profitability in Eastern India.

    Science.gov (United States)

    Lal, B; Gautam, Priyanka; Panda, B B; Raja, R; Singh, Teekam; Tripathi, R; Shahid, M; Nayak, A K

    2017-01-01

    Rice-rice system and rice fallows are no longer productive in Southeast Asia. Crop and varietal diversification of the rice based cropping systems may improve the productivity and profitability of the systems. Diversification is also a viable option to mitigate the risk of climate change. In Eastern India, farmers cultivate rice during rainy season (June-September) and land leftovers fallow after rice harvest in the post-rainy season (November-May) due to lack of sufficient rainfall or irrigation amenities. However, in lowland areas, sufficient residual soil moistures are available in rice fallow in the post-rainy season (November-March), which can be utilized for raising second crops in the region. Implementation of suitable crop/varietal diversification is thus very much vital to achieve this objective. To assess the yield performance of rice varieties under timely and late sown conditions and to evaluate the performance of dry season crops following them, three different duration rice cultivars were transplanted in July and August. In dry season several non-rice crops were sown in rice fallow to constitute a cropping system. The results revealed that tiller occurrence, biomass accumulation, dry matter remobilization, crop growth rate, and ultimately yield were significantly decreased under late transplanting. On an average, around 30% yield reduction obtained under late sowing may be due to low temperature stress and high rainfall at reproductive stages of the crop. Dry season crops following short duration rice cultivars performed better in terms of grain yield. In the dry season, toria was profitable when sown earlier and if sowing was delayed greengram was suitable. Highest system productivity and profitability under timely sown rice may be due to higher dry matter remobilization from source to sink. A significant correlation was observed between biomass production and grain yield. We infer that late transplanting decrease the tiller occurrence and assimilate

  1. Natural variation of rice blast resistance gene Pi-d2

    Science.gov (United States)

    Studying natural variation of rice resistance (R) genes in cultivated and wild rice relatives can predict resistance stability to rice blast fungus. In the present study, the protein coding regions of rice R gene Pi-d2 in 35 rice accessions of subgroups, aus (AUS), indica (IND), temperate japonica (...

  2. The land use potential of flood-prone rice fields using floating rice system in Bojonegoro regency in East Java

    Science.gov (United States)

    Irianto, H.; Mujiyo; Riptanti, E. W.; Qonita, A.

    2018-03-01

    Bojonegoro regency occupies the largest flood-prone rice fields of about 14,198 hectares, in East Java province. Floods commonly occur due to Bengawan Solo river over-burst, particularly in rainy season. The fields are potential for cultivating rice, but floods lasting for months causing these areas to be unproductive. The objective of this article is to examine the potential land use of flood prone rice fields in Bojonegoro regency using floating rice system as an effort to maintain productivity in rainy season. The method of this study is referential study about the rice production using floating cultivation system in other regions, which are later compared with the physical condition of the fields in Bojonegoro. The results of analysis show that rice cultivation using floating system can maintain rice production in flood prone areas during rainy season. The potential production of rice is 5-6 tons/ha. However, technical problems for cultivating rice cannot be ignored since farmers are not familiar with cultivating flooded fields. This article also explains alternatives of floating rice cultivation technique, which can be implemented effectively and efficiently. Pioneer work of developing floating rice in Bojonegoro that has been done by the Team of Faculty of Agriculture of UNS, Surakarta, is expected to serve as a medium for accelerating the adoption of cultivation technology innovation to farmers.

  3. Diseases of wild rice

    Science.gov (United States)

    Diseases are much more pronounced in cultivated wild rice than in natural stands, most likely due to the narrower genetic base of the populations, plant stress due to high planting density and floodwater removal prior to harvest, and high relative humidity in the plant canopy. Yield losses occur as ...

  4. All roads lead to weediness: patterns of genomic divergence reveal extensive recurrent weedy rice origins from South Asian Oryza

    Science.gov (United States)

    Weedy rice (Oryza spp.), a weedy relative of cultivated rice (O. sativa), invades and persists in cultivated rice fields worldwide. Many weedy rice populations have evolved similar adaptive traits, considered part of the “agricultural weed syndrome,” making this an ideal model to study the genetic b...

  5. Population genomics identifies the origin and signatures of selection of Korean weedy rice

    OpenAIRE

    He, Qiang; Kim, Kyu?Won; Park, Yong?Jin

    2016-01-01

    Summary Weedy rice is the same biological species as cultivated rice (Oryza sativa); it is also a noxious weed infesting rice fields worldwide. Its formation and population?selective or ?adaptive signatures are poorly understood. In this study, we investigated the phylogenetics, population structure and signatures of selection of Korean weedy rice by determining the whole genomes of 30 weedy rice, 30 landrace rice and ten wild rice samples. The phylogenetic tree and results of ancestry infere...

  6. Genome-wide analysis of Dongxiang wild rice (Oryza rufipogon Griff.) to investigate lost/acquired genes during rice domestication.

    Science.gov (United States)

    Zhang, Fantao; Xu, Tao; Mao, Linyong; Yan, Shuangyong; Chen, Xiwen; Wu, Zhenfeng; Chen, Rui; Luo, Xiangdong; Xie, Jiankun; Gao, Shan

    2016-04-26

    It is widely accepted that cultivated rice (Oryza sativa L.) was domesticated from common wild rice (Oryza rufipogon Griff.). Compared to other studies which concentrate on rice origin, this study is to genetically elucidate the substantially phenotypic and physiological changes from wild rice to cultivated rice at the whole genome level. Instead of comparing two assembled genomes, this study directly compared the Dongxiang wild rice (DXWR) Illumina sequencing reads with the Nipponbare (O. sativa) complete genome without assembly of the DXWR genome. Based on the results from the comparative genomics analysis, structural variations (SVs) between DXWR and Nipponbare were determined to locate deleted genes which could have been acquired by Nipponbare during rice domestication. To overcome the limit of the SV detection, the DXWR transcriptome was also sequenced and compared with the Nipponbare transcriptome to discover the genes which could have been lost in DXWR during domestication. Both 1591 Nipponbare-acquired genes and 206 DXWR-lost transcripts were further analyzed using annotations from multiple sources. The NGS data are available in the NCBI SRA database with ID SRP070627. These results help better understanding the domestication from wild rice to cultivated rice at the whole genome level and provide a genomic data resource for rice genetic research or breeding. One finding confirmed transposable elements contribute greatly to the genome evolution from wild rice to cultivated rice. Another finding suggested the photophosphorylation and oxidative phosphorylation system in cultivated rice could have adapted to environmental changes simultaneously during domestication.

  7. Productivity, Profitability and Resource Use Efficiency: A Comparative Analysis between Conventional and High Yielding Rice in Rajbari District, Bangladesh

    Directory of Open Access Journals (Sweden)

    Md. Yahia Bapari

    2016-10-01

    Full Text Available The study was analyzed the determinants, costs and benefits and resources allocation of both conventional and high yielding rice cultivation over the Rajbari district of Bangladesh. Data were accumulated from 300 regular rice growers of conventional and high yielding varieties and random sampling technique was applied for selecting the respondents from the study area from which information was collected through pre-tested questionnaire. Cobb – Douglas production function and gross margin were mainly used to determine the productivities and profits of both rice and the marginal value of the product was highly recommended to derive the optimal use of the resources. Results obtained by applying ordinary least square method showed that the most important factors of production in the study area were irrigation, labor, fertilizer and insecticide costs whose elasticities were 0.904, 0.048, 0.045 and 0.044 respectively and insignificant factors were seed and ploughing costs whose elasticities were – 0.009 and 0.030 respectively for high yielding rice. On the other hand, irrigation, insecticide, seed and ploughing costs of elasticities 0.880, 0.589, 0.116 and – 0.127 respectively were the important factors and minor role playing factors were labor and fertilizer costs whose elasticities were 0.098 and 0.077 respectively for conventional yielding rice. The core message from productivity analysis was that the irrigation was key variable which played a positive and vital role in producing rice of both varieties. All variables (resources were economically misallocated in the production activities of both varieties along the study area but high yielding rice was more profitable than conventional one. Results also showed that the farmers of the study area produced rice of both varieties in the inefficient range of production. Continuous supply of electricity, flexible credit and improving the existing resources were the prime policy recommendations of

  8. Biomphalaria species distribution and its effect on human Schistosoma mansoni infection in an irrigated area used for rice cultivation in northeast Brazil

    Directory of Open Access Journals (Sweden)

    Delmany Moitinho Barboza

    2012-09-01

    Full Text Available The role of irrigated areas for the spread of schistosomiasis is of worldwide concern. The aim of the present study was to investigate the spatial distribution of the intermediate snail host Biomphalaria in an area highly endemic for schistosomiasis due to Schistosoma mansoni, evaluating the relationship between irrigation and types of natural water sources on one hand, and the influence of place and time of water exposure on the intensity of human infection on the other. A geographical information system (GIS was used to map the distribution of the intermediate snail hosts in Ilha das Flores, Sergipe, Brazil, combined with a clinical/epidemiological survey. We observed a direct correlation between the intensity of human infection with S. mansoni and irrigation projects. Malacological studies to identify snail species and infection rates showed that B. glabrata is the main species responsible for human schistosomiasis in the municipality, but that B. straminea also plays a role. Our results provide evidence for a competitive selection between the two snail species in rice fields with a predominance of B. glabrata in irrigation systems and B. straminea in natural water sources.

  9. Study of radio-restoration by various mineral salts and silice wich products (Tuf and Pouzzolane) of rice embryos (oryza-sativa L, Cigalon variety) exposed to cobalt 60 gamma rays

    International Nuclear Information System (INIS)

    Mouthia-Khadija.

    1981-12-01

    Mutagenic treatments produce a large number of mutants per unit time and are used for plant improvement. However these treatments cause damage to cells. To counteract this radio-induced damage 2 methods are being tried: - Protection, which consists in the supply of an active product before application of mutagenic agents; - Restoration, which tries to repair the damage after mutagenic treatment. This work is devoted to restoration processes. Technique for the isolation and culture on a suitable nutrient of rice embryos (oryza sativa L, Cigalon variety) separated from non-irradiated caryopses were developed first. By separating out the embryo in this way it is possible to study in vitro the interactions between the embryo and the rest of the caryopsis (albumin + pericarp). The effects of radiations on embryos from caryopses exposed to cobalt 60 gamma rays were measured next, then the action of certain inorganic elements contained in the caryopsis tissues was analysed. On the basis of the first results obtained the differences in response between plantlets from embryos irradiated or otherwise treated or not either by zinc sulphate or by very silice-rich volcanic products (Tuf and Pouzzolane), were examined by chemical analysis techniques. These tests have allowed the detection of ionic changes induced by irradiation during the different stages of plant development and led to a better estimate of the radio-restoration mechanisms brought about by the various chemical compounds used [fr

  10. A practicable detection system for genetically modified rice by SERS-barcoded nanosensors.

    Science.gov (United States)

    Chen, Kun; Han, Heyou; Luo, Zhihui; Wang, Yanjun; Wang, Xiuping

    2012-04-15

    Since the global cultivation of genetically modified crops constantly expands, it remains a high demand to establish different ways to sort food and feed that consist or contain genetically modified organisms. Surface-enhanced Raman scattering (SERS) spectroscopy is a flexible tool for biological analysis due to its excellent properties for detecting wide varieties of target biomolecules including nucleic acids. In the present study, a SERS-barcoded nanosensor was developed to detect Bacillus thuringiensis (Bt) gene-transformed rice expressing insecticidal proteins. The barcoded sensor was designed by encapsulation of gold nanoparticles with silica and conjugation of oligonucleotide strands for targeting DNA strands. The transition between the cry1A(b) and cry1A(c) fusion gene sequence was used to construct a specific SERS-based detection method with a detection limit of 0.1 pg/mL. In order to build the determination models to screen transgene, a series mixture of Bt rice and normal rice were prepared for SERS assay, and the limit of detection was 0.1% (w/w) transgenic Bt rice relative to normal rice. The sensitivity and accuracy of the SERS-based assay was comparable with real-time PCR. The SERS-barcoded analytical method would provide precise detection of transgenic rice varieties but also informative supplement to avoid false positive outcomes. Crown Copyright © 2012. Published by Elsevier B.V. All rights reserved.

  11. A Survey of Myanmar Rice Production and Constraints

    Directory of Open Access Journals (Sweden)

    T.A.A. Naing

    2008-10-01

    Full Text Available Although modern high yielding varieties were introduced into Myanmar in the early 1980s, the national average of rice grain yield has stagnated at 3.2-3.4 t ha-1. To identify yield constraints, input intensities and the general practices of rice cultivation in Myanmar, a survey was conducted during the wet seasons of 2001 and 2002. A total of 98 farmers from five townships in Upper Myanmar and 16 in Lower Myanmar representing the most important areas of rice production were questioned on their management practices, yields, and perceived yield constraints over the previous four years. There was a recent decrease in the overall average rate of fertilizer application, an increase in the prevalence of rice-legume cropping systems, and only localized insect pest or disease problems. Additionally, rice yields were found to be higher in Upper Myanmar, likely the results of more suitable weather conditions, better irrigation, and ready market access. Furthermore, a number of critical factors affecting production are identified and possible solutions discussed.

  12. Gene, protein and network of male sterility in rice

    Directory of Open Access Journals (Sweden)

    Wang eKun

    2013-04-01

    Full Text Available Rice is one of the most important model crop plants whose heterosis has been well exploited in commercial hybrid seed production via a variety of types of male sterile lines. Hybrid rice cultivation area is steadily expanding around the world, especially in Southern Asia. Characterization of genes and proteins related to male sterility aims to understand how and why the male sterility occurs, and which proteins are the key players for microspores abortion. Recently, a series of genes and proteins related to cytoplasmic male sterility, photoperiod sensitive male sterility, self-incompatibility and other types of microspores deterioration have been characterized through genetics or proteomics. Especially the latter, offers us a powerful and high throughput approach to discern the novel proteins involving in male-sterile pathways which may help us to breed artificial male-sterile system. This represents an alternative tool to meet the critical challenge of further development of hybrid rice. In this paper, we reviewed the recent developments in our understanding of male sterility in rice hybrid production across gene, protein and integrated network levels, and also, present a perspective on the engineering of male sterile lines for hybrid rice production.

  13. Utilization of Starch-Enriched Brewery (Rice Wine) Waste for Mixotrophic Cultivation of Ettlia Sp. YC001 Used in Biodiesel Production.

    Science.gov (United States)

    Kam, Yeji; Sung, Mina; Cho, Hoon; Kang, Chang-Min; Kim, Jungmin; Han, Jong-In

    2017-12-01

    Starch-enriched brewery waste (SBW), an unexplored feedstock, was investigated as a nutritious low-cost source for the mixotrophic cultivation of Ettlia sp. YC001 for biodiesel production. Stirring, autoclaving, and sonication were assessed for the SBW, in conjunction with pH. Stirring at 55 °C was found to be the best, in terms of the effectiveness of starch hydrolysis and yeast disintegration as well as cost. The treated solutions were found to support the mixotrophic growth of microalgae: 20 g/L of glucose medium resulted in the highest biomass production of 9.26 g/L and one with 10 g/L of glucose showed the best lipid productivity of 244.2 mg/L/day. The unsaturated fatty acids increased in the resulting lipid and thus quality well suited for the transportation fuel. All these suggested that SBW, when treated properly, could indeed serve as a cheap feedstock for microalgae-based biodiesel production.

  14. Process Integration for the Disruption of Candida guilliermondii Cultivated in Rice Straw Hydrolysate and Recovery of Glucose-6-Phosphate Dehydrogenase by Aqueous Two-Phase Systems.

    Science.gov (United States)

    Gurpilhares, Daniela B; Pessoa, Adalberto; Roberto, Inês C

    2015-07-01

    Remaining cells of Candida guilliermondii cultivated in hemicellulose-based fermentation medium were used as intracellular protein source. Recovery of glucose-6-phosphate dehydrogenase (G6PD) was attained in conventional aqueous two-phase systems (ATPS) was compared with integrated process involving mechanical disruption of cells followed by ATPS. Influences of polyethylene glycol molar mass (M PEG) and tie line lengths (TLL) on purification factor (PF), yields in top (Y T ) and bottom (Y B ) phases and partition coefficient (K) were evaluated. First scheme resulted in 65.9 % enzyme yield and PF of 2.16 in salt-enriched phase with clarified homogenate (M PEG 1500 g mol(-1), TLL 40 %); Y B of 75.2 % and PF B of 2.9 with unclarified homogenate (M PEG 1000 g mol(-1), TLL 35 %). The highest PF value of integrated process was 2.26 in bottom phase (M PEG 1500 g mol(-1), TLL 40 %). In order to optimize this response, a quadratic model was predicted for the response PFB for process integration. Maximum response achieved was PFB = 3.3 (M PEG 1500 g mol(-1), TLL 40 %). Enzyme characterization showed G6P Michaelis-Menten constant (K M ) equal 0.07-0.05, NADP(+) K M 0.02-1.98 and optimum temperature 70 °C, before and after recovery. Overall, our data confirmed feasibility of disruption/extraction integration for single-step purification of intracellular proteins from remaining yeast cells.

  15. Life cycle GHG evaluation of organic rice production in northern Thailand.

    Science.gov (United States)

    Yodkhum, Sanwasan; Gheewala, Shabbir H; Sampattagul, Sate

    2017-07-01

    Greenhouse gas (GHG) emission is one of the serious international environmental issues that can lead to severe damages such as climate change, sea level rise, emerging disease and many other impacts. Rice cultivation is associated with emissions of potent GHGs such as methane and nitrous oxide. Thai rice has been massively exported worldwide however the markets are becoming more competitive than ever since the green market has been hugely promoted. In order to maintain the same level or enhance of competitiveness, Thai rice needs to be considered for environmentally conscious products to meet the international environmental standards. Therefore, it is necessary to evaluate the greenhouse gas emissions throughout the life cycle of rice production in order to identify the major emission sources and possible reduction strategies. In this research, the rice variety considered is Khao Dawk Mali 105 (KDML 105) cultivated by organic practices. The data sources were Don-Chiang Organic Agricultural Cooperative (DCOAC), Mae-teang district, Chiang Mai province, Thailand and the Office of Agricultural Economics (OAE) of Thailand with onsite records and interviews of farmers in 2013. The GHG emissions were calculated from cradle-to-farm by using the Life Cycle Assessment (LCA) approach and the 2006 IPCC Guideline for National Greenhouse Gas Inventories. The functional unit is defined as 1 kg of paddy rice at farm gate. Results showed that the total GHG emissions of organic rice production were 0.58 kg CO 2 -eq per kg of paddy rice. The major source of GHG emission was from the field emissions accounting for 0.48 kg CO 2 -eq per kg of paddy rice, about 83% of total, followed by land preparation, harvesting and other stages (planting, cultivation and transport of raw materials) were 9, 5 and 3% of total, respectively. The comparative results clearly showed that the GHG emissions of organic paddy rice were considerably lower than conventional rice production due to the

  16. Growth promotion and inhibition of the Amazonian wild rice species Oryza grandiglumis to survive flooding.

    Science.gov (United States)

    Okishio, Takuma; Sasayama, Daisuke; Hirano, Tatsuya; Akimoto, Masahiro; Itoh, Kazuyuki; Azuma, Tetsushi

    2014-09-01

    In Asian cultivated rice (Oryza sativa), distinct mechanisms to survive flooding are activated in two groups of varieties. Submergence-tolerant rice varieties possessing the SUBMERGENCE1A (SUB1A) gene display reduced growth during flash floods at the seedling stage and resume growth after the flood recedes, whereas deepwater rice varieties possessing the SNORKEL1 (SK1) and SNORKEL2 (SK2) genes display enhanced growth based on internodal elongation during prolonged submergence at the mature stage. In this study, we investigated the occurrence of these growth responses to submergence in the wild rice species Oryza grandiglumis, which is native to the Amazon floodplains. When subjected to gradual submergence, adult plants of O. grandiglumis accessions showed enhanced internodal elongation with rising water level and their growth response closely resembled that of deepwater varieties of O. sativa with high floating capacity. On the other hand, when subjected to complete submergence, seedlings of O. grandiglumis accessions displayed reduced shoot growth and resumed normal growth after desubmergence, similar to the response of submergence-tolerant varieties of O. sativa. Neither SUB1A nor the SK genes were detected in the O. grandiglumis accessions. These results indicate that the O. grandiglumis accessions are capable of adapting successfully to flooding by activating two contrasting mechanisms as the situation demands and that each mechanism of adaptation to flooding is not mediated by SUB1A or the SK genes.

  17. Períodos de interferência das plantas daninhas na cultura do arroz de terras altas. II - cultivar Caiapó Interference periods of weeds in the upland rice - Caiapó variety

    Directory of Open Access Journals (Sweden)

    Maria Rosangela Malheiros Silva

    2009-01-01

    Full Text Available Os experimentos foram desenvolvidos nos anos agrícolas 2003/2004 e 2004/2005, em área experimental da Universidade Estadual Paulista, Campus de Jaboticabal (SP, com o objetivo de se determinarem os períodos de interferência das plantas daninhas na cultura do arroz de terras altas, cultivar Caiapó. O delineamento experimental foi em blocos ao acaso com quatro repetições e 16 tratamentos. Os tratamentos foram constituídos por períodos crescentes de controle ou de convivência das plantas daninhas após a emergência da cultura: 0-10, 0-20, 0-30, 0-40, 0-50, 0-60, 0-70 dias e 0-colheita. Nos dois anos, as famílias predominantes eram Poaceae, Asteraceae, Amaranthaceae e Malvaceae e as principais plantas daninhas presentes foram: Cyperus rotundus L., Cenchrus echinatus L., Digitaria spp Heist., Echinochloa crus-galli (L. P. Beauv., Brachiaria decumbens Stapf., Eleusine indica Gaertn e Alternanthera tenella Colla. A cultivar de arroz de terras altas Caiapó deve ser mantida sem plantas daninhas nos 30 dias após a emergência.The experiments were carried out in two growing seasons (2003/04 and 2004/05 in an experimental area at São Paulo State University - UNESP, Jaboticabal Campus, to evaluate the weed interference periods on the upland Caiapó rice variety. The experimental design was randomized blocks with 4 replicates and 16 treatments. The treatments consisted of increasing periods of control or coexistence after emergence of the culture: 0-10; 0-20; 0-30; 0-40; 0-50; 0-60; 0-70 days; 0-harvest. The predominant families were Poaceae, Asteraceae, Amaranthaceae and Malvaceae, and the main weeds present were Cyperus rotundus L., Cenchrus echinatus L., Digitaria spp Heist., Echinochloa crus-galli (L. P. Beauv., Brachiaria decumbens Stapf., Eleusine indica Gaertn e Alternanthera tenella Colla for both years. The upland rice cultivar Caiapó is to be kept free of weeds for 30 days after emergence.

  18. Comparative study of endophytic and endophytic diazotrophic bacterial communities across rice landraces grown in the highlands of northern Thailand.

    Science.gov (United States)

    Rangjaroen, Chakrapong; Rerkasem, Benjavan; Teaumroong, Neung; Sungthong, Rungroch; Lumyong, Saisamorn

    2014-01-01

    Communities of bacterial endophytes within the rice landraces cultivated in the highlands of northern Thailand were studied using fingerprinting data of 16S rRNA and nifH genes profiling by polymerase chain reaction-denaturing gradient gel electrophoresis. The bacterial communities' richness, diversity index, evenness, and stability were varied depending on the plant tissues, stages of growth, and rice cultivars. These indices for the endophytic diazotrophic bacteria within the landrace rice Bue Wah Bo were significantly the lowest. The endophytic bacteria revealed greater diversity by cluster analysis with seven clusters compared to the endophytic diazotrophic bacteria (three clusters). Principal component analysis suggested that the endophytic bacteria showed that the community structures across the rice landraces had a higher stability than those of the endophytic diazotrophic bacteria. Uncultured bacteria were found dominantly in both bacterial communities, while higher generic varieties were observed in the endophytic diazotrophic bacterial community. These differences in bacterial communities might be influenced either by genetic variation in the rice landraces or the rice cultivation system, where the nitrogen input affects the endophytic diazotrophic bacterial community.

  19. Nuclear and chloroplast diversity and phenotypic distribution of rice (Oryza sativa L.) germplasm from the democratic people’s republic of Korea (DPRK; North Korea)

    Science.gov (United States)

    2014-01-01

    Background Rice accounts for 43% of staple food production in the Democratic People’s Republic of Korea (DPRK). The most widely planted rice varieties were developed from a limited number of ancestral lines that were repeatedly used as parents in breeding programs. However, detailed pedigrees are not publicly available and little is known about the genetic, phenotypic, and geographical variation of DPRK varieties. Results We evaluated 80 O. sativa accessions from the DPRK, consisting of 67 improved varieties and 13 landraces. Based on nuclear SSR analysis, we divide the varieties into two genetic groups: Group 1 corresponds to the temperate japonica subpopulation and represents 78.75% of the accessions, while Group 2 shares recent ancestry with indica varieties. Interestingly, members of Group 1 are less diverse than Group 2 at the nuclear level, but are more diverse at the chloroplast level. All Group 2 varieties share a single Japonica maternal-haplotype, while Group 1 varieties trace maternal ancestry to both Japonica and Indica. Phenotypically, members of Group 1 have shorter grains than Group 2, and varieties from breeding programs have thicker and wider grains than landraces. Improved varieties in Group 1 also show similar and/or better levels of cold tolerance for most traits, except for spikelet number per panicle. Finally, geographic analysis demonstrates that the majority of genetic variation is located within regions that have the most intensive rice cultivation, including the Western territories near the capital city Pyungyang. This is consistent with the conscious and highly centralized role of human selection in determining local dispersion patterns of rice in the DPRK. Conclusions Diversity studies of DPRK rice germplasm revealed two genetic groups. The most widely planted group has a narrow genetic base and would benefit from the introduction of new genetic variation from cold tolerant landraces, wild accessions, and/or cultivated gene pools to

  20. Uncovering a Nuisance Influence of a Phenological Trait of Plants Using a Nonlinear Structural Equation: Application to Days to Heading and Culm Length in Asian Cultivated Rice (Oryza Sativa L.).

    Science.gov (United States)

    Onogi, Akio; Ideta, Osamu; Yoshioka, Takuma; Ebana, Kaworu; Yamasaki, Masanori; Iwata, Hiroyoshi

    2016-01-01

    Phenological traits of plants, such as flowering time, are linked to growth phase transition. Thus, phenological traits often influence other traits through the modification of the duration of growth period. This influence is a nuisance in plant breeding because it hampers genetic evaluation of the influenced traits. Genetic effects on the influenced traits have two components, one that directly affects the traits and one that indirectly affects the traits via the phenological trait. These cannot be distinguished by phenotypic evaluation and ordinary linear regression models. Consequently, if a phenological trait is modified by introgression or editing of the responsible genes, the phenotypes of the influenced traits can change unexpectedly. To uncover the influence of the phenological trait and evaluate the direct genetic effects on the influenced traits, we developed a nonlinear structural equation (NSE) incorporating a nonlinear influence of the phenological trait. We applied the NSE to real data for cultivated rice (Oryza sativa L.): days to heading (DH) as a phenological trait and culm length (CL) as the influenced trait. This showed that CL of the cultivars that showed extremely early heading was shortened by the strong influence of DH. In a simulation study, it was shown that the NSE was able to infer the nonlinear influence and direct genetic effects with reasonable accuracy. However, the NSE failed to infer the linear influence in this study. When no influence was simulated, an ordinary bi-trait linear model (OLM) tended to infer the genetic effects more accurately. In such cases, however, by comparing the NSE and OLM using an information criterion, we could assess whether the nonlinear assumption of the NSE was appropriate for the data analyzed. This study demonstrates the usefulness of the NSE in revealing the phenotypic influence of phenological traits.

  1. Seleção de inoculantes à base de turfa contendo bactérias diazotróficas em duas variedades de arroz = Selection of peats inoculants with diazotrophic bacteria in two rice varieties

    Directory of Open Access Journals (Sweden)

    Vera Lúcia Divan Baldani

    2010-01-01

    inoculants, grown in pots containing soil and maintained outside a greenhouse. The dry mass accumulation, Npercent, N-total and yield were determined during the plant cycle. The humidity content varied with storage period. The survival measurement showed that only Burkholderia sp. M130 maintained the number of viable cells around 108 g-1 of peat, while there was a reduction in population of other strains. An increase of yield and total N of 13 and 19.4%, respectively in comparison to treatment fertilized with 40 kg N ha-1 was observed for variety IAC4440,inoculated with strain ZAE94. There was no difference in yield of the IR42 inoculated with either ZAE94 or M130, as compared to N control treatment. No significant difference in development of both rice varieties was observed for both peat used. The results suggest that peat can be used as a carrier for production of an inoculant based on diazotrophic bacteria, since it allowed maintenance of a bacterial population up to 108 cells g-1 peat during the storage period of up to100 days. The results obtained encourage the practice of inoculation of non-leguminous plants.

  2. Promising rice mutants

    International Nuclear Information System (INIS)

    Hakim, L.; Azam, M.A.; Miah, A.J.; Mansur, M.A.; Akanda, H.R.

    1988-01-01

    Two induced mutants namely, Mut NS 1 (tall) and Mut NS 5 (semi-dwarf) derived from rice variety Nizersail were evaluated for various agronomic characters at four locations in Bangladesh. Both the mutants matured about three weeks earlier and yielded significantly higher than the parent variety Nizersail. (author). 3 tabs., 9 refs

  3. Global Rice Atlas: Disaggregated seasonal crop calendar and production

    NARCIS (Netherlands)

    Balanza, Jane Girly; Gutierrez, Mary Anne; Villano, Lorena; Nelson, A.D.; Zwart, S.J.; Boschetti, Mirco; Koo, Jawoo; Reinke, Russell; Murty, M. V.R.; Laborte, Alice G.

    2014-01-01

    Purpose: Rice is an important staple crop cultivated in more than 163 million ha globally. Although information on the distribution of global rice production is available by country and, at times, at subnational level, information on its distribution within a year is often lacking in different rice

  4. Managing flood prone ecosystem for rice production in Bihar plains

    International Nuclear Information System (INIS)

    Khan, A.R.; Singh, S.S.

    2002-06-01

    A large area of the eastern region especially Bihar (0.5 million hectare) faces flood submergence and/or drought every year which creates an unfavorable environment for crop production. In this ecosystem only flood prone rice is grown whose cultivation is entirely different than normal rice crop. Managing the flood prone ecosystem for rice production needs to evaluate the reasons and a comprehensive appropriate technology through research efforts for better rice production under such harsh ecology. An attempt was made to develop a suitable agronomic package for rice cultivation during and after flooding in flood prone plains of Bihar. (author)

  5. Australian wild rice reveals pre-domestication origin of polymorphism deserts in rice genome.

    Directory of Open Access Journals (Sweden)

    Gopala Krishnan S

    Full Text Available BACKGROUND: Rice is a major source of human food with a predominantly Asian production base. Domestication involved selection of traits that are desirable for agriculture and to human consumers. Wild relatives of crop plants are a source of useful variation which is of immense value for crop improvement. Australian wild rices have been isolated from the impacts of domestication in Asia and represents a source of novel diversity for global rice improvement. Oryza rufipogon is a perennial wild progenitor of cultivated rice. Oryza meridionalis is a related annual species in Australia. RESULTS: We have examined the sequence of the genomes of AA genome wild rices from Australia that are close relatives of cultivated rice through whole genome re-sequencing. Assembly of the resequencing data to the O. sativa ssp. japonica cv. Nipponbare shows that Australian wild rices possess 2.5 times more single nucleotide polymorphisms than in the Asian wild rice and cultivated O. sativa ssp. indica. Analysis of the genome of domesticated rice reveals regions of low diversity that show very little variation (polymorphism deserts. Both the perennial and annual wild rice from Australia show a high degree of conservation of sequence with that found in cultivated rice in the same 4.58 Mbp region on chromosome 5, which suggests that some of the 'polymorphism deserts' in this and other parts of the rice genome may have originated prior to domestication due to natural selection. CONCLUSIONS: Analysis of genes in the 'polymorphism deserts' indicates that this selection may have been due to biotic or abiotic stress in the environment of early rice relatives. Despite having closely related sequences in these genome regions, the Australian wild populations represent an invaluable source of diversity supporting rice food security.

  6. Australian wild rice reveals pre-domestication origin of polymorphism deserts in rice genome.

    Science.gov (United States)

    Krishnan S, Gopala; Waters, Daniel L E; Henry, Robert J

    2014-01-01

    Rice is a major source of human food with a predominantly Asian production base. Domestication involved selection of traits that are desirable for agriculture and to human consumers. Wild relatives of crop plants are a source of useful variation which is of immense value for crop improvement. Australian wild rices have been isolated from the impacts of domestication in Asia and represents a source of novel diversity for global rice improvement. Oryza rufipogon is a perennial wild progenitor of cultivated rice. Oryza meridionalis is a related annual species in Australia. We have examined the sequence of the genomes of AA genome wild rices from Australia that are close relatives of cultivated rice through whole genome re-sequencing. Assembly of the resequencing data to the O. sativa ssp. japonica cv. Nipponbare shows that Australian wild rices possess 2.5 times more single nucleotide polymorphisms than in the Asian wild rice and cultivated O. sativa ssp. indica. Analysis of the genome of domesticated rice reveals regions of low diversity that show very little variation (polymorphism deserts). Both the perennial and annual wild rice from Australia show a high degree of conservation of sequence with that found in cultivated rice in the same 4.58 Mbp region on chromosome 5, which suggests that some of the 'polymorphism deserts' in this and other parts of the rice genome may have originated prior to domestication due to natural selection. Analysis of genes in the 'polymorphism deserts' indicates that this selection may have been due to biotic or abiotic stress in the environment of early rice relatives. Despite having closely related sequences in these genome regions, the Australian wild populations represent an invaluable source of diversity supporting rice food security.

  7. Chemical, Sensorial and Rheological Properties of a New Organic Rice Bran Beverage

    OpenAIRE

    Gerson Luis FACCIN; Letícia Adélia MIOTTO; Leila do Nascimento VIEIRA; Pedro Luiz Manique BARRETO; Edna Regina AMANTE

    2009-01-01

    Rice bran is a solid residue from rice polishing that is used in animal nutrition and rice oil production. Cultivation conditions with agro-toxics, lipids instability, and tendency for mycotoxin contamination restrict its application in human nutrition. Therefore, organic agriculture is an alternative to use the properties of rice bran. Rice bran beverage is a new cereal product from organic rice. This work presents the preliminary results of the chemical and rheological studies of a bath pas...

  8. The Challenges and Solutions for Cadmium-contaminated Rice in China: A Critical Review.

    Science.gov (United States)

    Hu, Yuanan; Cheng, Hefa; Tao, Shu

    2016-01-01

    The wide occurrence of Cd-contaminated rice in southern China poses significant public health risk and deserves immediate action, which arises primarily from extensive metal (including Cd) contamination of paddies with the fast expansion of nonferrous metal mining and smelting activities. Accumulation of Cd in rice grains can be reduced by removing Cd from the contaminated paddy soils, reducing its bioavailability, and controlling its uptake by rice plants. Although a range of measures can be taken to rehabilitate Cd-contaminated lands, including soil replacement and turnover, chemical washing, and phytoremediation, they are either too expensive and/or too slow. Various amendment materials, including lime, animal manures, and biochar, can be used to immobilize Cd in soils, but such fixation approach can only temporarily reduce Cd availability to rice uptake. Cultivation of alternative crops with low Cd accumulation in edible plant parts is impractical on large scales due to extensive contamination and food security concerns in southern China. Transgenic techniques can help develop rice cultivars with low Cd accumulation in grains, but little public acceptance is expected for such products. As an alternative, selection and development of low-Cd rice varieties and hybrids through plant biotechnology and breeding, particularly, by integration of marker-assisted selection (MAS) with traditional breeding, could be a practical and acceptable option that would allow continued rice production in soils with high bioavailability of Cd. Plant biotechnology and breeding can also help develop Cd-hyperaccumulating rice varieties, which can greatly facilitate phytoremediation of contaminated paddies. To eliminate the long-term risk of Cd entering the food chain, soils contaminated by Cd should be cleaned up when cost-effective remediation measures are available. Copyright © 2016 Elsevier Ltd. All rights reserved.

  9. Mitigation options for methane emissions from rice fields in the Philippines

    Energy Technology Data Exchange (ETDEWEB)

    Lantin, R.S.; Buendia, L.V.; Wassmann, R. [International Rice Research Institute, Laguna (Philippines)] [and others

    1996-12-31

    The contribution of Philippine rice production to global methane emission and breakthroughs in methane emission studies conducted in the country are presented in this paper. A significant impact in the reduction of GHG emissions from agriculture can be achieved if methane emissions from ricefields can be abated. This study presents the contribution of Philippine rice cultivation to global methane emission and breakthroughs in methane emission studies in the country which address the issue of mitigation. Using the derived emission factors from local measurements, rice cultivation contributes 566.6 Gg of methane emission in the Philippines. This value is 62% of the total methane emitted from the agriculture sector. The emission factors employed which are 78% of the IPCC value for irrigated rice and 95% for rainfed rice were derived from measurements with an automatic system taken during the growth duration in the respective ecosystems. Plots drained for 2 weeks at midtillering and before harvest gave a significant reduction in methane emission as opposed to continuously flooded plots and plots drained before harvest. The cultivar Magat reduced methane emission by 50% as compared to the check variety IR72. The application of ammonium sulfate instead of urea reduced methane emission by 10% to 34%. Addition of 6 t ha{sup {minus}1} phosphogypsum in combination with urea reduced emission by 74% as opposed to plots applied with urea alone. It is also from the results of such measurements that abatement strategies are based as regards to modifying treatments such as water management, fertilization, and choice of rice variety. It is not easy to identify and recommend mitigation strategies that will fit a particular cropping system. However, the identified mitigation options provide focus for the abatement of methane emission from ricefields.

  10. Asian wild rice is a hybrid swarm with extensive gene flow and feralization from domesticated rice.

    Science.gov (United States)

    Wang, Hongru; Vieira, Filipe G; Crawford, Jacob E; Chu, Chengcai; Nielsen, Rasmus

    2017-06-01

    The domestication history of rice remains controversial, with multiple studies reaching different conclusions regarding its origin(s). These studies have generally assumed that populations of living wild rice, O. rufipogon , are descendants of the ancestral population that gave rise to domesticated rice, but relatively little attention has been paid to the origins and history of wild rice itself. Here, we investigate the genetic ancestry of wild rice by analyzing a diverse panel of rice genomes consisting of 203 domesticated and 435 wild rice accessions. We show that most modern wild rice is heavily admixed with domesticated rice through both pollen- and seed-mediated gene flow. In fact, much presumed wild rice may simply represent different stages of feralized domesticated rice. In line with this hypothesis, many presumed wild rice varieties show remnants of the effects of selective sweeps in previously identified domestication genes, as well as evidence of recent selection in flowering genes possibly associated with the feralization process. Furthermore, there is a distinct geographical pattern of gene flow from aus , indica , and japonica varieties into colocated wild rice. We also show that admixture from aus and indica is more recent than gene flow from japonica , possibly consistent with an earlier spread of japonica varieties. We argue that wild rice populations should be considered a hybrid swarm, connected to domesticated rice by continuous and extensive gene flow. © 2017 Wang et al.; Published by Cold Spring Harbor Laboratory Press.

  11. Tolerance to zinc deficiency in rice correlates with zinc uptake and translocation

    NARCIS (Netherlands)

    Gao, X.; Zou, C.Q.; Zee, van der S.E.A.T.M.; Hoffland, E.

    2005-01-01

    To study variation in zinc efficiency (ZE) among current Chinese rice genotypes, a pot experiment was conducted with 15 aerobic and 8 lowland rice genotypes. Aerobic rice is currently bred by crossing lowland with upland rice genotypes, for growth in an aerobic cultivation system, which is saving

  12. Rice yield in response to climate trends and drought index in the Mun River Basin, Thailand

    NARCIS (Netherlands)

    Prabnakom, S.; Maskey, S.; Suryadi, F.X.; Fraiture, de C.M.S.

    2018-01-01

    Rice yields in Thailand are among the lowest in Asia. In northeast Thailand where about 90% of rice cultivation is rain-fed, climate variability and change affect rice yields. Understanding climate characteristics and their impacts on the rice yield is important for establishing proper adaptation

  13. ECONOMICS OF IMPROVED AND LOCAL VARIETIES OF ...

    African Journals Online (AJOL)

    Osondu

    2012-04-02

    Apr 2, 2012 ... This study was based on the economics of improved and local cassava ... staples because of cassava's low cash input cost ... cultivation and entrepreneurship, several new .... varieties which are more or less not improved.

  14. Introgression of Blast Resistance Genes (Putative Pi-b and Pi-kh) into Elite Rice Cultivar MR219 through Marker-Assisted Selection

    Science.gov (United States)

    Tanweer, Fatah A.; Rafii, Mohd Y.; Sijam, Kamaruzaman; Rahim, Harun A.; Ahmed, Fahim; Ashkani, Sadegh; Latif, Mohammad A.

    2015-01-01

    Blast is the most common biotic stress leading to the reduction of rice yield in many rice-growing areas of the world, including Malaysia. Improvement of blast resistance of rice varieties cultivated in blast endemic areas is one of the most important objectives of rice breeding programs. In this study, the marker-assisted backcrossing strategy was applied to improve the blast resistance of the most popular Malaysian rice variety MR219 by introgressing blast resistance genes from the Pongsu Seribu 2 variety. Two blast resistance genes, Pi-b and Pi-kh, were pyramided into MR219. Foreground selection coupled with stringent phenotypic selection identified 15 plants homozygous for the Pi-b and Pi-kh genes, and background selection revealed more than 95% genome recovery of MR219 in advanced blast resistant lines. Phenotypic screening against blast disease indicated that advanced homozygous blast resistant lines were strongly resistant against pathotype P7.2 in the blast disease endemic areas. The morphological, yield, grain quality, and yield-contributing characteristics were significantly similar to those of MR219. The newly developed blast resistant improved lines will retain the high adoptability of MR219 by farmers. The present results will also play an important role in sustaining the rice production of Malaysia. PMID:26734013

  15. Cultivation of oyster mushroom ( Pleurotus spp.) on palm oil ...

    African Journals Online (AJOL)

    Oyster mushroom is a popular mushroom due to its nutritional, medicinal and potential commercial value. In Malaysia, the fungus is currently cultivated on sawdust and rice husk. In this study, the efficiency of cultivating oyster mushroom was assessed using palm oil mesocarp fibre as a substrate. The experiment consisted ...

  16. Small brown planthopper resistance loci in wild rice (Oryza officinalis).

    Science.gov (United States)

    Zhang, Weilin; Dong, Yan; Yang, Ling; Ma, Bojun; Ma, Rongrong; Huang, Fudeng; Wang, Changchun; Hu, Haitao; Li, Chunshou; Yan, Chengqi; Chen, Jianping

    2014-06-01

    Host-plant resistance is the most practical and economical approach to control the rice planthoppers. However, up to date, few rice germplasm accessions that are resistant to the all three kinds of planthoppers (1) brown planthopper (BPH; Nilaparvata lugens Stål), (2) the small brown planthopper (SBPH; Laodelphax striatellus Fallen), and (3) the whitebacked planthopper (WBPH, Sogatella furcifera Horvath) have been identified; consequently, the genetic basis for host-plant broad spectrum resistance to rice planthoppers in a single variety has been seldom studied. Here, one wild species, Oryza officinalis (Acc. HY018, 2n = 24, CC), was detected showing resistance to the all three kinds of planthoppers. Because resistance to WBPH and BPH in O. officinalis has previously been reported, the study mainly focused on its SBPH resistance. The SBPH resistance gene(s) was (were) introduced into cultivated rice via asymmetric somatic hybridization. Three QTLs for SBPH resistance detected by the SSST method were mapped and confirmed on chromosomes 3, 7, and 12, respectively. The allelic/non-allelic relationship and relative map positions of the three kinds of planthopper resistance genes in O. officinalis show that the SBPH, WBPH, and BPH resistance genes in O. officinalis were governed by multiple genes, but not by any major gene. The data on the genetics of host-plant broad spectrum resistance to planthoppers in a single accession suggested that the most ideally practical and economical approach for rice breeders is to screen the sources of broad spectrum resistance to planthoppers, but not to employ broad spectrum resistance gene for the management of planthoppers. Pyramiding these genes in a variety can be an effective way for the management of planthoppers.

  17. Evaluation of Heavy Metals Contamination from Environment to Food Matrix by TXRF: The Case of Rice and Rice Husk

    Directory of Open Access Journals (Sweden)

    Fabjola Bilo

    2015-01-01

    Full Text Available This paper is devoted to the chemical analysis of contaminated soils of India and the rice grown in the same area. Total reflection X-ray fluorescence spectroscopy is a well-established technique for elemental chemical analysis of environmental samples, and it can be a useful tool to assess food safety. Metals uptake in rice crop grown in soils from different areas was studied. In this work soil, rice husk and rice samples were analyzed after complete solubilization of samples by microwave acid digestion. Heavy metals concentration detected in rice samples decreases in the following order: Mn > Zn > Cu > Ni > Pb > Cr. The metal content in rice husk was higher than in rice. This study suggests, for the first time, a possible role of heavy metals filter played by rice husk. The knowledge of metals sequestration capability of rice husk may promote some new management practices for rice cult