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Sample records for cucumber lateral suppressor

  1. Behavior of RNAi suppressor protein 2b of Cucumber mosaic virus in planta in presence and absence of virus.

    Science.gov (United States)

    Praveen, Shelly; Mangrauthia, Satendra K; Singh, Priyanka; Mishra, Anil K

    2008-08-01

    The 2b protein encoded by Cucumber mosaic virus (CMV) has been shown as a virus counter defense factor that interferes with the RNAi pathway. The 2b gene from CMV-banana, New Delhi isolate (CMV-NDLS) was amplified from CMV infected cucumber plants to generate the sense and antisense binary vector constructs for 2b expression and repression in planta. Constitutive expression of 2b gene in healthy Nicotiana tabacum caused phenotypic aberrations during somatic embryogenesis, which were not observed when expressed in CMV infected N. tabacum. Further, the established virus population in CMV infected N. tabacum was not affected by constitutive expression and repression of 2b gene. Thus, indicating its role in initiation of gene silencing, at the early stage of viral infection. This is the first demonstration of differential behavior of 2b suppressor protein in host development in the absence and presence of virus.

  2. Expression of Cucumber mosaic virus suppressor 2b alters FWA methylation and its siRNA accumulation in Arabidopsis thaliana.

    Science.gov (United States)

    Hamera, Sadia; Yan, Youngsheng; Song, Xiaoguang; Chaudhary, Safee Ullah; Murtaza, Iram; Su, Lei; Tariq, Muhammad; Chen, Xiaoying; Fang, Rongxiang

    2016-11-15

    The Cucumber mosaic virus (CMV) suppressor 2b co-localizes with AGO4 in cytoplasmic and nuclear fractions of Arabidopsis thaliana Biochemical fractionation of A. thaliana cellular extracts revealed that 2b and AGO4 coexist in multiple size exclusions. 2b transgenic A. thaliana exhibited an enhanced accumulation of 24nt siRNAs from flowering wageningen (FWA) and other heterochromatic loci. These plants also exhibited hypo-methylation of an endogenous- as well as transgene-FWA promoter at non-CG sites. In corroboration, both transgenic 2b and CMV infection affected the regulation of transposons which mimics the ago4 phenotype. In conclusion, 2b perturbs plant defense by interfering with AGO4-regulated transcriptional gene silencing.

  3. Expression of Cucumber mosaic virus suppressor 2b alters FWA methylation and its siRNA accumulation in Arabidopsis thaliana

    Directory of Open Access Journals (Sweden)

    Sadia Hamera

    2016-11-01

    Full Text Available The Cucumber mosaic virus (CMV suppressor 2b co-localizes with AGO4 in cytoplasmic and nuclear fractions of Arabidopsis thaliana. Biochemical fractionation of A. thaliana cellular extracts revealed that 2b and AGO4 coexist in multiple size exclusions. 2b transgenic A. thaliana exhibited an enhanced accumulation of 24nt siRNAs from flowering wageningen (FWA and other heterochromatic loci. These plants also exhibited hypo-methylation of an endogenous- as well as transgene-FWA promoter at non-CG sites. In corroboration, both transgenic 2b and CMV infection affected the regulation of transposons which mimics the ago4 phenotype. In conclusion, 2b perturbs plant defense by interfering with AGO4-regulated transcriptional gene silencing.

  4. Quantitative trait locus analysis of lateral branchrelated traits in cucumber (Cucumis sativus L.) using recombinant inbred lines

    Institute of Scientific and Technical Information of China (English)

    JIANG Su; YUAN XiaoJun; PAN JunSong; HE HuanLe; CAI Run

    2008-01-01

    A group of 224 recombinant inbred lines (RILs) was derived from a narrow cross between 2 cucumber (Cucumis sativus L.) lines, namely, S94 (Northern China type with weak lateral branch growth potential and early lateral branch sprouting time) and S06 (Northern European type with strong lateral branch growth potential and late lateral branch sprouting time). These lines were then used for investigating lateral branch-related traits. A total of 36 quantitative trait loci (QTLs) were detected for the following 4 lateral branch-related traits: lateral branch average length (LBAL), lateral branch total length (LBTL), lateral branch number (LBN), and first lateral branch node (FLBN). Further, each QTL explained 3.1% (Ibtl 2.1, spring) to 32.3% (Ibn2.3, spring) of the observed phenotypic variance. Eleven QTLs (Ibal1.1, Ibtl 1.1, Ibn1.2, fIbn1.2, etc.) for different traits were found to be clustered on the e23m18d-ME23EM6c section (7.4 cM) of linkage group (LG) 1; further, 15 QTLs (Ibal 2.1, Ibtl 2.1, Ibn 2.1, flbn 2.1, etc.)were found to be clustered on the S94A1-ME4SA4a section (13.9 cM) of LG2. Twenty-one QTLs explained more than 10% of the phenotypic variance. Moreover, Ibtl 1.3 (autumn, 26.2%, logarithm of odds (LOD)= 17.4; spring, 26,9%, LOD=17.9) had stable position and contribution in both seasons. Several se-quence-anchor markers (CMBR40, F, CS30, S94A1, CSWTA11B, etc.) were closely linked with some QTLs for LBAL, LBTL, LBN, and FLBN, which can be used for the marker-assisted selection to improve the plant architecture in cucumber breeding.

  5. Quantitative trait locus analysis of lateral branch-related traits in cucumber (Cucumis sativus L.) using recombinant inbred lines

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    A group of 224 recombinant inbred lines (RILs) was derived from a narrow cross between 2 cucumber (Cucumis sativus L.) lines, namely, S94 (Northern China type with weak lateral branch growth potential and early lateral branch sprouting time) and S06 (Northern European type with strong lateral branch growth potential and late lateral branch sprouting time). These lines were then used for investigating lateral branch-related traits. A total of 36 quantitative trait loci (QTLs) were detected for the following 4 lateral branch-related traits: lateral branch average length (LBAL), lateral branch total length (LBTL), lateral branch number (LBN), and first lateral branch node (FLBN). Further, each QTL explained 3.1% (lbtl2.1, spring) to 32.3% (lbn2.3, spring) of the observed phenotypic variance. Eleven QTLs (lbal1.1, lbtl1.1, lbn1.2, flbn1.2, etc.) for different traits were found to be clustered on the e23m18d-ME23EM6c section (7.4 cM) of linkage group (LG) 1; further, 15 QTLs (lbal2.1, lbtl2.1, lbn2.1, flbn2.1, etc.) were found to be clustered on the S94A1-ME4SA4a section (13.9 cM) of LG2. Twenty-one QTLs explained more than 10% of the phenotypic variance. Moreover, lbtl1.3 (autumn, 26.2%, logarithm of odds (LOD) = 17.4; spring, 26.9%, LOD = 17.9) had stable position and contribution in both seasons. Several se-quence-anchor markers (CMBR40, F, CS30, S94A1, CSWTA11B, etc.) were closely linked with some QTLs for LBAL, LBTL, LBN, and FLBN, which can be used for the marker-assisted selection to improve the plant architecture in cucumber breeding.

  6. Coat protein mutations in an attenuated Cucumber mosaic virus encoding mutant 2b protein that lacks RNA silencing suppressor activity induces chlorosis with photosynthesis gene repression and chloroplast abnormalities in infected tobacco plants.

    Science.gov (United States)

    Mochizuki, Tomofumi; Yamazaki, Ryota; Wada, Tomoya; Ohki, Satoshi T

    2014-05-01

    In tobacco plants, the Cucumber mosaic virus (CMV) pepo strain induces mosaic symptoms, including pale green chlorosis and malformed tissues. Here, we characterized the involvement of 2b protein and coat protein (CP) in the development of mosaic symptoms. A 2b mutant (R46C) that lacks viral suppressor of RNA silencing (VSR) activity showed an asymptomatic phenotype with low levels of virus accumulation. Tomato spotted wilt virus NSs protein did not complement the virulence of the R46C, although it did restore high-level virus accumulation. However, R46C mutants expressing mutated CP in which the amino acid P129 was mutated to A, E, C, Q, or S induced chlorosis that was associated with reduced expression of chloroplast and photosynthesis related genes (CPRGs) and abnormal chloroplasts with fewer thylakoid membranes. These results suggest that the CP of the CMV pepo strain acquires virulence by amino acid mutations, which causes CPRG repression and chloroplast abnormalities.

  7. Localization of genes for lateral branch and female sex expression and construction of a molecular linkage map in cucumber (Cucumis sativus L. ) with RAPD markers

    Institute of Scientific and Technical Information of China (English)

    LI Xiaozun; PAN Junsong; WANG Gang; TIAN Libo; SI Longting; WU Aizhong; CAI Run

    2005-01-01

    A cucumber ( Cucumis sativus L. ) molecular linkage map, including 79 random-amplified polymorphic DNAs (RAPD)and two genes , lb for lateral branch and f for female sex expression, is constructed from a cross between a line, S52, with weak lateral growing ability and staminate from Dabieshan Mountains area in China and another line, S06, with strong lateral growing ability and gynoecious from Europe. The map contains nine linkage groups and spans 1110.0 cM with an average distance of 13.7 cM between loci. The lb locus is located in a longer linkage group LG-2 and flanked by two markers, OP-Q5-1 and OP-M-2-2, at 9.3 cM and 15.9 cM, respectively. In the meantime, the RAPD loci, OP-Q5-2 and BC151, in a short linkage group were found to flank f at 13.7 cM and 13.4 cM,respectively. The construction of RAPD map has paved a way for further study of the genes for lateral branch, female sex expression and other agronomic traits in cucumber.

  8. The bifunctional abiotic stress signalling regulator and endogenous RNA silencing suppressor FIERY1 is required for lateral root formation

    KAUST Repository

    Chen, Hao

    2010-09-28

    The Arabidopsis FIERY1 (FRY1) locus was originally identified as a negative regulator of stress-responsive gene expression and later shown to be required for suppression of RNA silencing. In this study we discovered that the FRY1 locus also regulates lateral root formation. Compared with the wild type, fry1 mutant seedlings generated significantly fewer lateral roots under normal growth conditions and also exhibited a dramatically reduced sensitivity to auxin in inducing lateral root initiation. Using transgenic plants that overexpress a yeast homolog of FRY1 that possesses only the 3\\', 5\\'-bisphosphate nucleotidase activity but not the inositol 1-phosphatase activity, we demonstrated that the lateral root phenotypes in fry1 result from loss of the nucleotidase activity. Furthermore, a T-DNA insertion mutant of another RNA silencing suppressor, XRN4 (but not XRN2 or XRN3), which is an exoribonuclease that is inhibited by the substrate of the FRY1 3\\', 5\\'-bisphosphate nucleotidase, exhibits similar lateral root defects. Although fry1 and xrn4 exhibited reduced sensitivity to ethylene, our experiments demonstrated that restoration of ethylene sensitivity in the fry1 mutant is not sufficient to rescue the lateral root phenotypes of fry1. Our results indicate that RNA silencing modulated by FRY1 and XRN4 plays an important role in shaping root architecture. © 2010 Blackwell Publishing Ltd.

  9. Lateral suppressor and Goblet act in hierarchical order to regulate ectopic meristem formation at the base of tomato leaflets.

    Science.gov (United States)

    Rossmann, Susanne; Kohlen, Wouter; Hasson, Alice; Theres, Klaus

    2015-03-01

    In seed plants, new axes of growth are established by the formation of meristems, groups of pluripotent cells that maintain themselves and initiate the formation of lateral organs. After embryonic development, secondary shoot meristems form in the boundary zones between the shoot apical meristem and leaf primordia, the leaf axils. In addition, many plant species develop ectopic meristems at different positions of the plant body. In the compound tomato leaf, ectopic meristems can initiate at the base of leaflets, which are delimited by two distinct boundary zones, referred to as the proximal (PLB) and distal (DLB) leaflet boundaries. We demonstrate that the two leaflet boundaries differ from each other and that ectopic meristem formation is strictly limited to the DLB. Our data suggest that the DLB harbours a group of pluripotent cells that seems to be the launching pad for meristem formation. Initiation of these meristems is dependent on the activities of the transcriptional regulators Goblet (Gob) and Lateral suppressor (Ls), specifically expressed in the DLB. Gob and Ls act in hierarchical order, because Ls transcript accumulation is dependent on Gob activity, but not vice versa. Ectopic meristem formation at the DLB is also observed in other seed plants, like Cardamine pratensis, indicating that it is part of a widespread developmental program. Ectopic meristem formation leads to an increase in the number of buds, enhances the capacity for survival and opens the route to vegetative propagation. © 2015 The Authors The Plant Journal © 2015 John Wiley & Sons Ltd.

  10. Cucumber cookbook

    CERN Document Server

    Garg, Shankar

    2015-01-01

    This book is intended for business and development personnel who want to use Cucumber for behavior-driven development and test automation. Readers with some familiarity with Cucumber will find this book of most benefit. Since the main objective of this book is to create test automation frameworks, previous experience in automation will be helpful.

  11. Alanine scanning of cucumber mosaic virus (CMV 2b protein identifies different positions for cell-to-cell movement and gene silencing suppressor activity.

    Directory of Open Access Journals (Sweden)

    Katalin Nemes

    Full Text Available The multifunctional 2b protein of CMV has a role in the long distance and local movement of the virus, in symptom formation, in evasion of defense mediated by salicylic acid as well as in suppression of RNA silencing. The role of conserved amino acid sequence domains were analyzed previously in the protein function, but comprehensive analysis of this protein was not carried out until recently. We have analyzed all over the 2b protein by alanine scanning mutagenesis changing three consecutive amino acids (aa to alanine. We have identified eight aa triplets as key determinants of the 2b protein function in virus infection. Four of them (KKQ/22-24/AAA, QNR/31-33/AAA, RER/34-36/AAA, SPS/40-42/AAA overlap with previously determined regions indispensable in gene silencing suppressor function. We have identified two additional triplets necessary for the suppressor function of the 2b protein (LPF/55-57/AAA, NVE/10-12/AAA, and two other positions were required for cell-to-cell movement of the virus (MEL/1-3/AAA, RHV/70-72/AAA, which are not essential for suppressor activity.

  12. Molecular cloning, phylogenetic analysis, and expression patterns of LATERAL SUPPRESSOR-LIKE and REGULATOR OF AXILLARY MERISTEM FORMATION-LIKE genes in sunflower (Helianthus annuus L.).

    Science.gov (United States)

    Fambrini, Marco; Salvini, Mariangela; Pugliesi, Claudio

    2016-12-29

    The wild sunflower (Helianthus annuus) plants develop a highly branched form with numerous small flowering heads. The origin of a no branched sunflower, producing a single large head, has been a key event in the domestication process of this species. The interaction between hormonal factors and several genes organizes the initiation and outgrowth of axillary meristems (AMs). From sunflower, we have isolated two genes putatively involved in this process, LATERAL SUPPRESSOR (LS)-LIKE (Ha-LSL) and REGULATOR OF AXILLARY MERISTEM FORMATION (ROX)-LIKE (Ha-ROXL), encoding for a GRAS and a bHLH transcription factor (TF), respectively. Typical amino acid residues and phylogenetic analyses suggest that Ha-LSL and Ha-ROXL are the orthologs of the branching regulator LS and ROX/LAX1, involved in the growth habit of both dicot and monocot species. qRT-PCR analyses revealed a high accumulation of Ha-LSL transcripts in roots, vegetative shoots, and inflorescence shoots. By contrast, in internodal stems and young leaves, a lower amount of Ha-LSL transcripts was observed. A comparison of transcription patterns between Ha-LSL and Ha-ROXL revealed some analogies but also remarkable differences; in fact, the gene Ha-ROXL displayed a low expression level in all organs analyzed. In situ hybridization (ISH) analysis showed that Ha-ROXL transcription was strongly restricted to a small domain within the boundary zone separating the shoot apical meristem (SAM) and the leaf primordia and in restricted regions of the inflorescence meristem, beforehand the separation of floral bracts from disc flower primordia. These results suggested that Ha-ROXL may be involved to establish a cell niche for the initiation of AMs as well as flower primordia. The accumulation of Ha-LSL transcripts was not restricted to the boundary zones in vegetative and inflorescence shoots, but the mRNA activity was expanded in other cellular domains of primary shoot apical meristem as well as AMs. In addition, Ha

  13. Cucumber vein yellowing virus

    Science.gov (United States)

    Cucurbits are an important crop of temperate, subtropical and tropical regions of the world. Cucumber vein yellowing virus (CVYV) is a major viral pathogen of cucurbits. This chapter provides an overview of the biology of CVYV and the disease it causes....

  14. Indoleacetaldehyde in Cucumber Seedlings 1

    Science.gov (United States)

    Purves, William K.; Brown, Hugh M.

    1978-01-01

    The presence of indoleacetaldehyde in cucumber (Cucumis sativus L.) cotyledons was demonstrated by thin layer chromatographic RF values in three solvent systems, by the formation and hydrolysis of a bisulfite adduct, and by chemical reduction to indoleethanol and oxidation to indoleacetic acid. Bioassays indicated a minimum indoleacetaldehyde content in etiolated cotyledons of 0.7 μg per kg fresh weight. Tissue samples from all parts of both green and etiolated cucumber seedlings reduced exogenously supplied indoleacetaldehyde to indoleethanol. PMID:16660219

  15. Fine Mapping identifies CsGCN5 encoding a histone acetyltransferase as putative candidate gene for tendril-less1 mutation (td-1) in cucumber

    Science.gov (United States)

    The tendril is originated from the lateral meristem, and it is an important and characteristic organ for the species in the Cucurbitaceae family including cucumber. While tendril has its evolutionary significance, it also poses a nuisance in cucumber cultivation in protected environments in which te...

  16. U.S. Fresh and Pickling Cucumber Markets

    OpenAIRE

    2013-01-01

    As part of an effort to estimate the potential impact of downy mildew to U.S. growers of cucumbers, this report reviews historical trends in production and markets for cucumbers including slicing and pickling cucumbers.

  17. Dynamics of Microbial Communities in Bulk and Developing Cucumber Rhizosphere Soil

    Institute of Scientific and Technical Information of China (English)

    HU Yuan-sen; WU Kun; LIU Na; CHEN Hong-ge; JIA Xin-cheng

    2004-01-01

    The microbial population dynamics in bulk and developing cucumber rhizospheres were studied by cultivation and cultivation-independent approach based on directly extracted DNA to provide baseline data. Soil and rhizosphere samples were taken from tested field 2, 4, 7 and 10 weeks after the seeds were planted, which was positively related to the corresponding date of cucumber growth stages. The plate culture amount showed that total number of bacteria,fungi and actinomyces began to rise when cucumber planted and quickly reached peak at seedling or blossom period, but decreased slightly later. Bacterial population in rhizosphere was higher by comparison with that of counterpart except for seedling and flowering stages, but the shift trend of them were quite similar all the time. Nitrogen fixating, nitrobacter and ammonifying bacteria showed the same change tendency in population as bacteria and actinomyces did, however, cellulose-decomposing bacteria had the contrary rhizosphere effect as cucumber developed. Data revealed that positive relevance existed between the dominant rhizosphere microbe population and cucumber development. PCR was employed to amolify the V3 region of 16S rDNA, then the products were subjected to denaturing gradient gel electrophoresis(DGGE). DGGE profile indicated that a few microbe species lived stable in farmland soil, but some were influenced by population due to cucumber roots growth. Significant difference was observed in bulk and rhizosphere soils especially for the seedling and flowering samples. Few prominent bands in DGGE patterns, which displayed stronger or less illumination, means the representative bacteria had great population variation in that period. These phenomena indicated that flowering cucumber heavily affected rhizosphere bacteria, or the bacteria, most probably the uncultured bacteria, functioned specially to cucumber blossom. Most detected bands with no illumination change in DGGE quite possibly represent the indigenous

  18. Didymella bryoniae on glasshouse cucumbers

    NARCIS (Netherlands)

    Steekelenburg, van N.A.M.

    1986-01-01

    The increasing incidence of fruit rot, caused by Didymella bryoniae , in glasshouse cucumbers in the Netherlands gave rise to a study of the biology of the pathogen, the epidemiology of the disease, and control methods. Stems, leaves and growing tips may be attacked, and fruits ma

  19. Cucumber mosaic virus in Rubus

    Science.gov (United States)

    Cucumber mosaic virus (CMV) has been reported on red raspberry in Chile, Scotland and the Soviet Union and in Chile on blackberry. Its occurrence in Rubus is rare and seems to cause little damage. Except for one early, unconfirmed report, CMV has not been reported on Rubus in North America. This vir...

  20. Chicken Porridge with Sea Cucumber

    Institute of Scientific and Technical Information of China (English)

    1994-01-01

    Main ingredients: 50 grams of chicken breast, 200 grams of gray sea cucumbers Supplementary ingredients: 100 grams of water chestnut, the whites of four eggs, MSG, salt, wine, meat soup, starch, sugar, scallions, ginger, soy sauce Directions: Chop up the chicken breast and water chestnut into small

  1. Didymella bryoniae on glasshouse cucumbers

    NARCIS (Netherlands)

    Steekelenburg, van N.A.M.

    1986-01-01

    The increasing incidence of fruit rot, caused by Didymella bryoniae , in glasshouse cucumbers in the Netherlands gave rise to a study of the biology of the pathogen, the epidemiology of the disease, and control methods. Stems, leaves and growing tips may be attacked, and fruits

  2. Analysis of 50 Cucumber Accessions by RAPD Markers

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    Genetic diversity of 50 cucumber (Cucumis sativus L.) accessions from American, Holland, Japan and China was detected and evaluated using RAPD markers. 25 selected primers produced 215 scorable polymorphic RAPD bands and the ratio of polymorphism is 86.98%. Four main groups of cucumber accessions could be distinguished from UPGMA analysis: Occidental cucumber, South-China cucumber, North-China cucumber and Xishuangbanna cucumber. Our result confirmed that cucumber is a narrow-based germplasm, nevertheless RAPD analysis was still useful in cucumber genotypic differentiation. More significantly, Xishuangbanna cucumber (Cucumis sativus L. Var Xishuangbannanesis Qi et Yuan), a mutation of cucumber, was clustered together to a special group in the study, which implied its special status in cucumber germplasm.

  3. Subtropical Modern Greenhouse Cucumber Canopy Transpiration Under Summer Climate Condition

    Institute of Scientific and Technical Information of China (English)

    LUO Wei-hong; WANG Xiao-han; DING Wei-min; CHEN Yu-qing; DAI Jian-feng

    2002-01-01

    Greenhouse canopy transpiration not only has effects on greenhouse air temperature and humidity, but also is important for determining the set-point of fertigation. In this study, Penman-Monteith equation was used to calculate the greenhouse cucumber canopy transpiration under summer climate condition.The effects of greenhouse environmental factors on canopy transpiration were analyzed based on the measurements of greenhouse microclimate factors and canopy transpiration. The results showed that Penman-Monteith equation was reliable and robust in estimating greenhouse cucumber canopy transpiration under summer climate condition. Greenhouse cucumber canopy transpiration rate increased linearly with the increase of net radiation and water vapor pressure deficit (VPD) above the canopy. But the maximum value of the canopy transpiration rate occurred at the same time as that of VPD whereas about two hours later than that of net radiation. Based on the results, it was concluded that in addition to radiation, air humidity should also be considered when determine the set-point of fertigation.

  4. Chicken Porridge with Sea Cucumber

    Institute of Scientific and Technical Information of China (English)

    1994-01-01

    Chicken Porridge with Sea Cucumber is a dish created according to a well-known story about Jia Chang, who raised cocks during the Tang Dynasty. Cockfighting was popular among commonfolk during the Tang Dynasty. Emperor Xuanzong selected 5,000 cocks in Chang’an, and 500 children to feed them and train them to fight. Jia Chang was one of the children. Sent to the

  5. Tumor suppressor and hepatocellular carcinoma

    Institute of Scientific and Technical Information of China (English)

    Juliette Martin; Jean-Frangois Dufour

    2008-01-01

    A few signaling pathways are driving the growth of hepatocellular carcinoma. Each of these pathways possesses negative regulators. These enzymes, which normally suppress unchecked cell proliferation, are circumvented in the oncogenic process, either the over-activity of oncogenes is sufficient to annihilate the activity of tumor suppressors or tumor suppressors have been rendered ineffective. The loss of several key tumor suppressors has been described in hepatocellular carcinoma. Here, we systematically review the evidence implicating tumor suppressors in the development of hepatocellular carcinoma.

  6. Neurons and tumor suppressors.

    Science.gov (United States)

    Zochodne, Douglas W

    2014-08-20

    Neurons choose growth pathways with half hearted reluctance, behavior that may be appropriate to maintain fixed long lasting connections but not to regenerate them. We now recognize that intrinsic brakes on regrowth are widely expressed in these hesitant neurons and include classical tumor suppressor molecules. Here, we review how two brakes, PTEN (phosphatase and tensin homolog deleted on chromosome 10) and retinoblastoma emerge as new and exciting knockdown targets to enhance neuron plasticity and improve outcome from damage or disease.

  7. Neurons and Tumor Suppressors

    OpenAIRE

    Douglas W Zochodne

    2014-01-01

    Neurons choose growth pathways with half hearted reluctance, behavior that may be appropriate to maintain fixed long lasting connections but not to regenerate them. We now recognize that intrinsic brakes on regrowth are widely expressed in these hesitant neurons and include classical tumor suppressor molecules. Here, we review how two brakes, PTEN (phosphatase and tensin homolog deleted on chromosome 10) and retinoblastoma emerge as new and exciting knockdown targets to e...

  8. TECHNOLOGY TRANSFER FOR CUCUMBER (Cucumis sativus ...

    African Journals Online (AJOL)

    Dell

    2011-11-07

    Nov 7, 2011 ... This technology transfer trials have shown the advantages and ... Key words: Cucumber production, protected agriculture tunnels, cost benefit ratio, technology transfer, ... Use of PA can increase production by more than five.

  9. Allelopathic Potential of Cucumber Tissues Aqueous Extracts

    Institute of Scientific and Technical Information of China (English)

    DONG Lin-lin; HAO Zhi-peng; ZUO Yuan-mei; LI Xiao-lin; WANG Qian

    2011-01-01

    [ Objective] The aim of this study was to explore allelopathic effects of the water-extracted crude of cucumber plant parts on seed germination and seedling growth of lettuce ( Lactuca sativa L. ), cabbage ( Brassica pekinensis L. ), radish ( Raphanus sativus L. ) and scallion ( Allium fistulosum L. ). [ Method] The allelopathic effects of different cucumber tissues aqueous extracts were investigated on lettuce, cabbage,radish and scallion using the water-soluble allelopathic principle by seedling bioassay tests. [ Result] The trends of inhibitory effects of different cucumber parts increased with increasing extract concentrations. The inhibition effects and the inhibition rate of three aqueous extracts were more significant on root growth than shoot length. Leaf aqueous extracts represented the most exhibited and root aqueous extracts representing the least inhibitory on seed germination, shoot length and root length of lettuce, cabbage, radish and scallion. [Conclusion] This study had provided basis for allelopathic character of different cucumber plant parts.

  10. Effects of Lactic Acid Bacteria Inoculated Fermentation on Pickled Cucumbers

    OpenAIRE

    2013-01-01

    The aim of this study was to determine the effects of Lactic Acid Bacteria (LAB) fermentation on the texture and organic acid of pickled cucumbers. Texture and sensory evaluation as well as a microscopic observation were performed to study the textural differences among fresh cucumber, Spontaneous fermentation (SF) cucumber and LAB Inoculating Fermentation (LABIF) cucumber. Accumulation of seven organic acids i.e., oxalic, tartaric, malic, lactic, acetic, citric and succinic acid during cucum...

  11. THE EVOLUTION OF SOME CHEMICAL PARAMETERS DURING CUCUMBERS PICKLING

    OpenAIRE

    2013-01-01

    The evolution of some chemical indices (salt content, pH and ascorbic acid content) during cucumbers pickling was the purpose of this paper. The experience materials used in this work were: cucumbers cornichon, iodized and non-iodized salt and tap water. The samples containing cucumbers in iodized and in non-iodized brine were left to ferment, and at 3-4 days were made determinations of above mentioned indices. During pickling process, non-iodized salt has accumulated in cucumber ...

  12. Tumor Suppressor Genes: A Key to the Cancer Puzzle?

    Science.gov (United States)

    Oppenheimer, Steven B.

    1991-01-01

    Author describes developments in understanding of tumor suppressor genes or antioncogenes that he feels is most important breakthrough in solving cancer problem. Describes 1969 starting work of Harris with mouse fibroblast genes and later work of Knudson with retinoblastoma cells. Provides evidence that deletion of chromosome that results in the…

  13. SENSORY ANALYSIS OF CUCUMBER VARIETIES AT DIFFERENT HARVEST TIMES II. PICKLING CUCUMBERS

    Directory of Open Access Journals (Sweden)

    Galina PEVICHAROVA

    2010-02-01

    Full Text Available During the period 2001-2002 sensory analysis of Bulgarian pickling cucumber varieties Toni, Iren and Pobeda was carried out. The varieties had identical parent female breeding line G-3. Fresh and canned fruits were evaluated at three harvest times. It was established that sensory properties of canned fruits cannot be entirely prognosticated from panel test data of the fresh ones. For breeding purposes sensory analysis of pickling cucumbers for processing should be performed using sterilized pickling cucumbers but not only fresh ones. More precise information about visual and gustatory properties of new created lines and hybrids will be obtained by performing of sensory analysis at different harvest times.

  14. Effect of Maturity Stage on the Gene Expression of Antioxidative Enzymes in Cucumber (Cucumis sativus L.) Fruits Under Chilling Stress

    Institute of Scientific and Technical Information of China (English)

    QIAN Chun-lu; MI Hong-bo; ZHAO Yu-ying; HE Zhi-ping; MAO Lin-chun

    2013-01-01

    The gene expression patterns of antioxidative enzymes in cucumber (Cucumis sativus L.) fruits at four different maturity stages, immature (3-8 d after anthesis (DAA), mature (9-16 DAA), breaker (17-22 DAA), and yellow (35-40 DAA), were determined before and after cold storage at 2°C for 9 d and after subsequent rewarming at 20°C for 2 d. The electrolyte leakage and malondialdehyde content in cucumber fruits were increased after cold storage and subsequent rewarming. Increased expressions of peroxidase, ascorbate peroxidase (APX), and monodehydroascorbate reductase after cold storage played an important role in cucumber fruits to cope with chilling injury. The elevated cyt-superoxide dismutase, catalase, APX and dehydroascorbate reductase after subsequent rewarming in cucumber fruits facilitated the recovery from chilling stress. The highest expression levels of all the seven antioxidative enzyme genes in yellow fruits might be responsible for the enhanced chilling tolerance. Cucumber fruits at earlier developmental stages was more susceptible to chilling stress than those at later stages. The relative higher gene expressions of antioxidative enzymes genes at earlier developmental stages may be the responses to the sever oxidative stress caused by chilling injury.

  15. Mathematical modelling of cucumber (cucumis sativus) drying

    Science.gov (United States)

    Shahari, N.; Hussein, S. M.; Nursabrina, M.; Hibberd, S.

    2014-07-01

    This paper investigates the applicability of using an experiment based mathematical model (empirical model) and a single phase mathematical model with shrinkage to describe the drying curve of cucumis sativus (cucumber). Drying experiments were conducted using conventional air drying and data obtained from these experiments were fitted to seven empirical models using non-linear least square regression based on the Levenberg Marquardt algorithm. The empirical models were compared according to their root mean square error (RMSE), sum of square error (SSE) and coefficient of determination (R2). A logarithmic model was found to be the best empirical model to describe the drying curve of cucumber. The numerical result of a single phase mathematical model with shrinkage was also compared with experiment data for cucumber drying. A good agreement was obtained between the model predictions and the experimental data.

  16. Tumor suppressor molecules and methods of use

    Science.gov (United States)

    Welch, Peter J.; Barber, Jack R.

    2004-09-07

    The invention provides substantially pure tumor suppressor nucleic acid molecules and tumor suppressor polypeptides. The invention also provides hairpin ribozymes and antibodies selective for these tumor suppressor molecules. Also provided are methods of detecting a neoplastic cell in a sample using detectable agents specific for the tumor suppressor nucleic acids and polypeptides.

  17. SENSORY ANALYSIS OF CUCUMBER VARIETIES AT DIFFERENT HARVEST TIMES II. PICKLING CUCUMBERS

    OpenAIRE

    2010-01-01

    During the period 2001-2002 sensory analysis of Bulgarian pickling cucumber varieties Toni, Iren and Pobeda was carried out. The varieties had identical parent female breeding line G-3. Fresh and canned fruits were evaluated at three harvest times. It was established that sensory properties of canned fruits cannot be entirely prognosticated from panel test data of the fresh ones. For breeding purposes sensory analysis of pickling cucumbers for processing should be performed using sterilized p...

  18. rDNA-ITS sequence analysis of pathogens of cucumber downy mildew and cucumber powdery mildew

    Institute of Scientific and Technical Information of China (English)

    Na WANG; Yajun MA; Cuiyun YANG; Guanghui DAI; Zhezhi WANG

    2008-01-01

    To determine the pathogens of cucumber downy mildew and cucumber powdery mildew by molecular marker,we amplified and sequenced the rDNA-ITS region of the pathogens of cucumber downy mildew and cucumber powdery mildew collected from the Shanghai region.The intra-/interspecific sequence difference was analyzed by rDNA-ITS sequence.The results show that the length of rDNA-ITS1 and rDNA-ITS2 of cucumber downy mildew's pathogen was 141 bp and 406 bp,respectively,with GC contents of 41.13% in ITS1 and 46.8% (Minhang and Jinshan District,sml and sm2) or 46.55% (Pudong District,sm3) in ITS2.The rDNA-ITS sequence was intraspecific conservation.The interspecific difference was related with their kin relationship.The pathogen of cucumber downy mildew was identified as Pseudoperonospora cubensis by molecular marker.The length of rDNA-ITS1 and rDNA-ITS2 of cucumber powdery mildew's pathogen was 136 bp and 89 bp,respectively,with GC contents being 59.56% and 66.29%,and rDNA-ITS sequence being highly conservative in this study that was the same as Sphaerotheca cucurbitae.But the sequence difference between the strains in the Shanghai region in this study with S.fuliginea was 4.5%,which was identified by morphology.It is suggested that the pathogen of cucumber powdery mildew should be further clarified and determined.

  19. Effects of Lactic Acid Bacteria Inoculated Fermentation on Pickled Cucumbers

    Directory of Open Access Journals (Sweden)

    Xiaoyi Ji

    2013-12-01

    Full Text Available The aim of this study was to determine the effects of Lactic Acid Bacteria (LAB fermentation on the texture and organic acid of pickled cucumbers. Texture and sensory evaluation as well as a microscopic observation were performed to study the textural differences among fresh cucumber, Spontaneous fermentation (SF cucumber and LAB Inoculating Fermentation (LABIF cucumber. Accumulation of seven organic acids i.e., oxalic, tartaric, malic, lactic, acetic, citric and succinic acid during cucumber pickling were also studied. The disruption extent of the middle lamella in SF cucumber displayed more obviously than that in LABIF cucumber, implying that LABIF contributed to keep the cucumber original structure intact. Based on the organic acid accumulation pattern, in SF LAB and Acetic Acid Bacteria (AAB fermented simultaneously, while in LABIF LAB fermented beforehand thus being in dominant position, then AAB fermented vigorously in a acidic condition created by LAB. The acetic acid accumulaton pattern could be regarded as the distinctive feature between SF and LABIF. The orgnic acids produced in LABIF were higher than that in SF. The final score of sensory evaluation combining texture analysis demonstrated that LABIF overmatched SF. It was concluded that LABIF could obviously enhance the quality of pickled cucumber and overwhelming SF, due to LABIF more beneficial to keep the cucumber original structure intact and organic acids accumulation.

  20. Genetic basis of mitochondrial sorting in cucumber

    Science.gov (United States)

    Regeneration of cucumber (Cucumis sativus) from cell cultures produces plants with distinct mosaic (MSC) phenotypes, misshapen cotyledons and leaves, reduced fertility, and low seed germination. The MSC phenotypes are paternally transmitted and associated with deletions or under-representations of s...

  1. Cucurbits [Cucumber, melon, pumpkin and squash

    Science.gov (United States)

    The focus of this chapter is on the edible members of the Cucurbitaceae family. The three important food-grade cucurbit genera Citrullus, Cucumis, and Cucurbita include the species Citrullus lanatus watermelons), Cucumis melo (cantaloupes and other sweet melons), Cucumis sativa (cucumbers and pick...

  2. Sea Cucumbers Metabolites as Potent Anti-Cancer Agents

    OpenAIRE

    Janakiram, Naveena B; Altaf Mohammed; RAO, CHINTHALAPALLY V.

    2015-01-01

    Sea cucumbers and their extracts have gained immense popularity and interest among researchers and nutritionists due to their nutritive value, potential health benefits, and use in the treatment of chronic inflammatory diseases. Many areas of the world use sea cucumbers in traditional foods and folk medicine. Though the actual components and their specific functions still remain to be investigated, most sea cucumber extracts are being studied for their anti-inflammatory functions, immunostimu...

  3. Characterization of siRNAs derived from cucumber green mottle mosaic virus in infected cucumber plants.

    Science.gov (United States)

    Li, Yongqiang; Deng, Congliang; Shang, Qiaoxia; Zhao, Xiaoli; Liu, Xingliang; Zhou, Qi

    2016-02-01

    Virus-derived small interfering RNAs (vsiRNAs) of cucumber green mottle mosaic virus (CGMMV), a member of the genus Tobamovirus, were characterised in cucumber plants by deep sequencing. CGMMV vsiRNAs of 21-22 nt in length predominated, suggesting that there might be a conserved mechanism of DCL2 and DCL4 involvement in the biogenesis of vsiRNAs, as well as a common RNA silencing pathway in CGMMV-infected cucumber plants. The 5'-terminal base of vsiRNAs was biased towards C/A/U, suggesting that CGMMV vsiRNAs might be loaded into diverse AGO-containing RISCs to disturb the gene expression of host plants. Possible targets for some of the vsiRNAs were also predicted.

  4. Multiple amine oxidases in cucumber seedlings.

    Science.gov (United States)

    Percival, F W; Purves, W K

    1974-10-01

    Cell-free extracts of cucumber (Cucumis sativus L. cv. National Pickling) seedlings were found to have amine oxidase activity when assayed with tryptamine as a substrate. Studies of the effect of lowered pH on the extract indicated that this activity was heterogeneous, and three amine oxidases could be separated by ion exchange chromatography. The partially purified enzymes were tested for their activities with several substrates and for their sensitivities to various amine oxidase inhibitors. One of the enzymes may be a monoamine oxidase, although it is inhibited by some diamine oxidase inhibitors. The other two enzymes have properties more characteristic of the diamine oxidases. The possible relationship of the amine oxidases to indoleacetic acid biosynthesis in cucumber seedlings is discussed.

  5. Dissipation kinetics of metalaxyl in cucumber.

    Science.gov (United States)

    Rattan, G S; Sharma, Neeraj

    2012-05-01

    Residues of metalaxyl were estimated in cucumber fruits using Gas Liquid Chromatography (GLC) with Nitrogen phosphorus detector (NPD). Following three applications of Ridomil-MZ @ 0.3% and 0.6%, the average initial deposits of metalaxyl were observed to be 0.19 and 0.24 mg kg(-1), respectively. The residues dissipated below the limit of quantification (LOQ) of 0.02 mg kg(-1) after 10 days at both the dosages. The half-life values (T(1/2)) of metalaxyl was worked out to be 3.5 and 3.0 days, respectively at 0.3% and 0.6% concentration. Thus, a waiting period of 1 day was suggested for the safe consumption of metalaxyl treated cucumber.

  6. Bacterial contamination of cucumber fruit through adhesion.

    Science.gov (United States)

    Reina, Laura D; Fleming, Henry P; Breidt, Frederick

    2002-12-01

    In this study, the adhesion of bacteria to fresh cucumber surfaces in aqueous suspension was shown to be dependent on time of incubation, inoculum species and concentration, and temperature. The adhesion of bacteria to the fruit in wash water was less extensive at lower temperatures and shorter exposure times. Various species of bacteria were adsorbed to cucumber surfaces in the following relative order: Salmonella Typhimurium > Staphylococcus aureus > Lactobacillus plantarum > Listeria monocytogenes. Cells were adsorbed at all temperatures tested (5, 15, 25, and 35 degrees C) at levels that depended on incubation time, but the numbers of cells adsorbed were larger at higher incubation temperatures. Levels of adhesion of bacteria to dewaxed fruit were higher for L. monocytogenes and lower for Salmonella Typhimurium, L. plantarum, and S. aureus than were levels of adhesion to waxed fruit.

  7. Imaging technique for detection of internal defects of pickling cucumbers

    Science.gov (United States)

    Pickling cucumbers are susceptible to damage during harvest and postharvest handling and processing. While it is easier to detect external defects, it is difficult to detect internal defects such as bruises and hollow or split cucumbers. Hyperspectral imaging technique under transmittance mode was i...

  8. Detection of defect in pickling cucumbers using hyperspectral imaging

    Science.gov (United States)

    Pickling cucumbers are susceptible to damage due to adverse growth condition, improper harvest timing, and inappropriate harvesting and postharvest handling operations. There are typically five to 10 percentages of harvested pickling cucumbers that are not suitable for pickling and hence should be r...

  9. Hyperspectral Imaging for Defect Detection of Pickling Cucumber

    Science.gov (United States)

    This book chapter reviews the recent progress on hyperspectral imaging technology for defect inspection of pickling cucumbers. The chapter first describes near-infrared hyperspectral reflectance imaging technique for the detection of bruises on pickling cucumbers. The technique showed good detection...

  10. USDA, ARS beit alpha cucumber inbred backcross line population

    Science.gov (United States)

    A series of Beit Alpha cucumber (Cucumis sativus L.) market type inbred backcross were released in January 2010 by the Agricultural Research Service, United States Department of Agriculture. The IBL were made available to U.S. cucumber breeders to supply a source from which they may develop Beit Al...

  11. Genetic diversity and population structure of cucumber (Cucumis sativus L.)

    Science.gov (United States)

    Understanding genetic variation in germplasm collection is essential for the conservation and their efficient use in plant breeding. Cucumber is an important vegetable crop worldwide. Previous studies revealed a low genetic diversity in cucumber, but detailed insights into the crop’s genetic structu...

  12. Biosynthesis, regulation, and domestication of bitterness in cucumber

    NARCIS (Netherlands)

    Shang, Y.; Ma, Y.; Bouwmeester, H.J.

    2014-01-01

    Cucurbitacins are triterpenoids that confer a bitter taste in cucurbits such as cucumber, melon, watermelon, squash, and pumpkin. These compounds discourage most pests on the plant and have also been shown to have antitumor properties. With genomics and biochemistry, we identified nine cucumber gene

  13. Effect of Heavy Metal Pollution on Cucumber POD Isoenzyme

    Institute of Scientific and Technical Information of China (English)

    2003-01-01

    The Experiment was carried out to study heavy metal pollution effect on cucumber POD isozyme in our experiment.The results showed that:the activities of POD in cucumber seeds increased in low concentration treatment,and decreased in high concentration treatment after being treated with heavy metal.The critical band patterns of POD isoenzyme was changed by heavy metal pollution.

  14. Bioactive compounds of sea cucumbers and their therapeutic effects

    Science.gov (United States)

    Shi, Shujuan; Feng, Wenjing; Hu, Song; Liang, Shixiu; An, Nina; Mao, Yongjun

    2016-05-01

    Sea cucumbers belong to the Class Holothuroidea of marine invertebrates. They are commercially valuable and prized as a food and folk medicine in Asia. Nutritionally, sea cucumbers have an impressive profile of valuable nutrients such as vitamins, minerals and amino acids. A number of unique biological and pharmacological activities/properties, including anticancer, anticoagulant/antithrombotic, antimicrobial, antioxidant, antihyperlipidemic, antihyperglycemic, anti-inflammatory, antihypertension and radioprotective, have been ascribed to various compounds isolated from sea cucumbers. The therapeutic properties and medicinal benefits of sea cucumbers can be linked to the presence of a wide array of bioactives, especially triterpene glycosides, acid mucopolysaccharide, sphingoid bases, glycolipids, fucosylated chondroitin sulfate, polysaccharides, phospholipids, cerebrosides, phosphatidylcholines, and other extracts and hydrolysates. This review highlights the valuable bioactive components as well as the multiple therapeutic properties of sea cucumbers with a view to exploring their potential uses as functional foods and a natural source of new multifunctional drugs.

  15. Role of cucurbitacin C in resistance to spider mite (Tetranychus urticae) in cucumber (Cucumber sativus L.)

    NARCIS (Netherlands)

    Balkema-Boomstra, A.G.; Zijlstra, S.; Verstappen, F.W.A.; Inggamer, H.; Mercke, P.

    2003-01-01

    Cucurbitacins are bitter triterpenoid compounds that are toxic to most organisms and occur widely in wild and cultivated Cucurbitaceae. The only cucurbitacin identified in Cucumis sativus is cucurbitacin C. The bitter taste of cucumber has been correlated with resistance to the spider mite

  16. Pure Culture Fermentation of Brined Cucumbers.

    Science.gov (United States)

    Etchells, J L; Costilow, R N; Anderson, T E; Bell, T A

    1964-11-01

    The relative abilities of Pediococcus cerevisiae, Lactobacillus plantarum, L. brevis, and several other species of lactic acid bacteria to grow and produce acid in brined cucumbers were evaluated in pure culture fermentations. Such fermentations were made possibly by the use of two techniques, gamma radiation (0.83 to 1.00 Mrad) and hot-water blanching (66 to 80 C for 5 min), designed first to rid the cucumbers of naturally occurring, interfering, and competitive microbial groups prior to brining, followed by inoculation with the desired lactic acid bacteria. Of the nine species tested, strains of the three common to cucumber fermentations, P. cerevisiae, L. plantarum, and L. brevis, grew to the highest populations, and produced the highest levels of brine acidity and the lowest pH values in fermentations at 5.4 to 5.6% NaCl by weight; also, their sequence of active development in fermentations, with the use of a three-species mixture for inoculation, was in the species order just named. This sequence of occurrence was similar to that estimated by others for natural fermentations. The rates of growth and acid production in fermentations with a mixture of P. cerevisiae, L. plantarum, and L. brevis increased as the incubation temperature was increased from 21 to 27 to 32 C; however, the maximal populations and acidities attained were essentially the same for fermentations at each temperature. Further, these same three species were found to be the most salt tolerant of those tested; their upper limit for appreciable growth and measurable acid production was about 8% salt, whereas thermophilic species such as L. thermophilus, L. lactis, L. helveticus, L. fermenti, and L. delbrueckii exhibited a much lower salt tolerance, ranging from about 2.5 to 4.0%. However, certain strains of L. delbrueckii grew very rapidly in cucumbers brined at 2.5 to 3.0% salt, and produced sufficient acid in about 30 hr at 48 C to reduce the brine pH from above 7.0 to below 4.0. An inexpensive

  17. Rhizobacterial exopolysaccharides elicit induced resistance on cucumber.

    Science.gov (United States)

    Park, Kyungseok; Kloepper, Joseph W; Ryu, Choong-Min

    2008-06-01

    The role of exopolysaccharides (EPSs) from a plant growth-promoting rhizobacterium, Burkholderia gladioli IN26, on elicitation of induced systemic resistance was investigated. A purified EPS induced expression of PR- 1a::GUS on tobacco and elicited induced resistance against Colletotrichum orbiculare on cucumber. The maximum level of disease protection was noted when seeds were soaked in 200 ppm of the EPS. Our results indicate that EPS from specific rhizobacteria can elicit induced resistance and suggest that bacterial EPS might be a useful elicitor of resistance under field conditions.

  18. The genome of the cucumber, Cucumis sativus L

    DEFF Research Database (Denmark)

    Huang, Sanwen; Li, Ruiqiang; Zhang, Zhonghua

    2009-01-01

    ancestral chromosomes after divergence from Cucumis melo. The sequenced cucumber genome affords insight into traits such as its sex expression, disease resistance, biosynthesis of cucurbitacin and 'fresh green' odor. We also identify 686 gene clusters related to phloem function. The cucumber genome provides......Cucumber is an economically important crop as well as a model system for sex determination studies and plant vascular biology. Here we report the draft genome sequence of Cucumis sativus var. sativus L., assembled using a novel combination of traditional Sanger and next-generation Illumina GA...

  19. The entry of cucumber mosaic virus into cucumber xylem is facilitated by co-infection with zucchini yellow mosaic virus.

    Science.gov (United States)

    Mochizuki, Tomofumi; Nobuhara, Shinya; Nishimura, Miho; Ryang, Bo-Song; Naoe, Masaki; Matsumoto, Tadashi; Kosaka, Yoshitaka; Ohki, Satoshi T

    2016-10-01

    We investigated the synergistic effects of co-infection by zucchini yellow mosaic virus (ZYMV) and cucumber mosaic virus (CMV) on viral distribution in the vascular tissues of cucumber. Immunohistochemical observations indicated that ZYMV was present in both the phloem and xylem tissues. ZYMV-RNA was detected in both the xylem wash and guttation fluid of ZYMV-inoculated cucumber. Steam treatment at a stem internode indicated that ZYMV enters the xylem vessels and moves through them but does not cause systemic infection in the plant. CMV distribution in singly infected cucumbers was restricted to phloem tissue. By contrast, CMV was detected in the xylem tissue of cotyledons in plants co-infected with CMV and ZYMV. Although both ZYMV-RNA and CMV-RNA were detected in the xylem wash and upper internodes of steam-treated, co-infected cucumbers grown at 24 °C, neither virus was detected in the upper leaves using an ELISA assay. Genetically modified CMV harboring the ZYMV HC-Pro gene was distributed in the xylem and phloem tissues of singly inoculated cucumber cotyledons. These results indicate that the ZYMV HC-Pro gene facilitates CMV entry into the xylem vessels of co-infected cucumbers.

  20. Anticancer Activity of Sea Cucumber Triterpene Glycosides

    Directory of Open Access Journals (Sweden)

    Dmitry L. Aminin

    2015-03-01

    Full Text Available Triterpene glycosides are characteristic secondary metabolites of sea cucumbers (Holothurioidea, Echinodermata. They have hemolytic, cytotoxic, antifungal, and other biological activities caused by membranotropic action. These natural products suppress the proliferation of various human tumor cell lines in vitro and, more importantly, intraperitoneal administration in rodents of solutions of some sea cucumber triterpene glycosides significantly reduces both tumor burden and metastasis. The anticancer molecular mechanisms include the induction of tumor cell apoptosis through the activation of intracellular caspase cell death pathways, arrest of the cell cycle at S or G2/M phases, influence on nuclear factors, NF-κB, and up-down regulation of certain cellular receptors and enzymes participating in cancerogenesis, such as EGFR (epidermal growth factor receptor, Akt (protein kinase B, ERK (extracellular signal-regulated kinases, FAK (focal adhesion kinase, MMP-9 (matrix metalloproteinase-9 and others. Administration of some glycosides leads to a reduction of cancer cell adhesion, suppression of cell migration and tube formation in those cells, suppression of angiogenesis, inhibition of cell proliferation, colony formation and tumor invasion. As a result, marked growth inhibition of tumors occurs in vitro and in vivo. Some holothurian triterpene glycosides have the potential to be used as P-gp mediated MDR reversal agents in combined therapy with standard cytostatics.

  1. Cucumber disease diagnosis using multispectral images

    Science.gov (United States)

    Feng, Jie; Li, Hongning; Shi, Junsheng; Yang, Weiping; Liao, Ningfang

    2009-07-01

    In this paper, multispectral imaging technique for plant diseases diagnosis is presented. Firstly, multispectral imaging system is designed. This system utilizes 15 narrow-band filters, a panchromatic band, a monochrome CCD camera, and standard illumination observing environment. The spectral reflectance and color of 8 Macbeth color patches are reproduced between 400nm and 700nm in the process. In addition, spectral reflectance angle and color difference is obtained through measurements and analysis of color patches using spectrometer and multispectral imaging system. The result shows that 16 narrow-bands multispectral imaging system realizes good accuracy in spectral reflectance and color reproduction. Secondly, a horticultural plant, cucumber' familiar disease are the researching objects. 210 multispectral samples are obtained by multispectral and are classified by BP artificial neural network. The classification accuracies of Sphaerotheca fuliginea, Corynespora cassiicola, Pseudoperonospora cubensis are 100%. Trichothecium roseum and Cladosporium cucumerinum are 96.67% and 90.00%. It is confirmed that the multispectral imaging system realizes good accuracy in the cucumber diseases diagnosis.

  2. Reducing whiteflies on cucumber using intercropping with less preferred vegetables

    Science.gov (United States)

    The effectiveness of four less preferred vegetables – celery, asparagus lettuce, Malabar spinach, and edible amaranth – were investigated for suppression of two biotypes of sweet potato whitefly, Bemisia tabaci (Gennadius) (Hemiptera: Aleyrodidae) on cucumber, Cucumis sativus L. (Cucurbitaceae). Int...

  3. Phase Characterization of Cucumber Growth: A Chemical Gel Model

    Directory of Open Access Journals (Sweden)

    Bo Li

    2016-01-01

    Full Text Available Cucumber grows with complex phenomena by changing its volume and shape, which is not fully investigated and challenges agriculture and food safety industry. In order to understand the mechanism and to characterize the growth process, the cucumber is modeled as a hydrogel in swelling and its development is studied in both preharvest and postharvest stages. Based on thermodynamics, constitutive equations, incorporating biological quantities, are established. The growth behavior of cucumber follows the classic theory of continuous or discontinuous phase transition. The mechanism of bulged tail in cucumber is interpreted by phase coexistence and characterized by critical conditions. Conclusions are given for advances in food engineering and novel fabrication techniques in mechanical biology.

  4. Genetic Analysis on Bent Characters of Cucumber Fruit

    Institute of Scientific and Technical Information of China (English)

    ZHANG Peng; QIN Zhiwei; WANG Lili; ZHOU Xiuyan

    2011-01-01

    Bent varieties and straight varieties were made as parents for the genetic analysis to investigate cucumber bending genetic mechanism. The results showed that the bent characters of the cucumber fruit (BCCF) were quantitative inheritance controlled by multiple genes and major genes. The additive effect played the main role and the dominance effect played the lesser role. Compared with the additive environmental variance, the dominant-environmental variance was more important and the cucumber fruit was more easily affected by the additive effect. The broad heritability and the narrow heritability of BCCF were both higher. The varieties of D0455 and D07299 could be used as parents which were benefit for improving the straight characters of the cucumber fruit

  5. THE EFFECT OF CUCUMBER ( ) EXTRACT ON ACID INDUCED ...

    African Journals Online (AJOL)

    LIVINGSTON

    ... of corneal acid burn. Cucumber extract, corneal acid burn, guinea pigs, alpha hydroxyl acids, beta hydroxyl ..... cholesterol arteriosclerosis in rabbits. Circulation.12:696 ... production in human skin fibroblast cultures in vitro. Dermatol. Surg.

  6. Analysis of the systemic colonization of cucumber plants by Cucumber green mottle mosaic virus.

    Science.gov (United States)

    Moreno, I M; Thompson, J R; García-Arenal, F

    2004-03-01

    Systemic movement of Cucumber green mottle mosaic virus (CGMMV) in cucumber plants was shown to be from photoassimilate source to sink, thus indicating phloem transport. Nevertheless, CGMMV was not detected by immunocytochemical procedures in the intermediary cell-sieve element complex in inoculated cotyledons, where photoassimilate loading occurs. In stem internodes, CGMMV was first localized in the companion cells of the external phloem and subsequently in all tissues except the medulla, therefore suggesting leakage of the virus from, and reloading into, the transport phloem during systemic movement. In systemically infected sink leaves, CGMMV was simultaneously detected in the xylem and phloem. Interestingly, CGMMV accumulated to high levels in the differentiating tracheids of young leaves implying that the xylem could be involved in the systemic movement of CGMMV. This possibility was tested using plants in which cell death was induced in a portion of the stem by steam treatment. At 24 degrees C, steam treatment effectively prevented the systemic movement of CGMMV, even though viral RNA was detected in washes of the xylem above the steamed internode suggesting that xylem circulation occurred. At 29 degrees C, CGMMV systemically infected steam-treated cucumber plants, indicating that CGMMV can move systemically via the xylem. Xylem transport of CGMMV was, however, less efficient than phloem transport in terms of the time required for systemic infection and the percentage of plants infected.

  7. Sea Cucumber: New source of Protein for Human Consumption

    OpenAIRE

    Daniela Vaz Pratas

    2014-01-01

    Aquaculture, probably the fastest growing food-producing sector, now accounts for nearly 50 percent of the world's food fish consumed by humans, and this share is expected to increase further to meet future demand. Sea cucumbers are considered highly marketable product and this has resulted in an increasing overfishing of natural sea cucumber stocks. Nevertheless, these resources are almost unexploited in the Mediterranean region. Many species of holothurians have been recognized as an altern...

  8. Genetic diversity and population structure of cucumber (Cucumis sativus L..

    Directory of Open Access Journals (Sweden)

    Jing Lv

    Full Text Available Knowing the extent and structure of genetic variation in germplasm collections is essential for the conservation and utilization of biodiversity in cultivated plants. Cucumber is the fourth most important vegetable crop worldwide and is a model system for other Cucurbitaceae, a family that also includes melon, watermelon, pumpkin and squash. Previous isozyme studies revealed a low genetic diversity in cucumber, but detailed insights into the crop's genetic structure and diversity are largely missing. We have fingerprinted 3,342 accessions from the Chinese, Dutch and U.S. cucumber collections with 23 highly polymorphic Simple Sequence Repeat (SSR markers evenly distributed in the genome. The data reveal three distinct populations, largely corresponding to three geographic regions. Population 1 corresponds to germplasm from China, except for the unique semi-wild landraces found in Xishuangbanna in Southwest China and East Asia; population 2 to Europe, America, and Central and West Asia; and population 3 to India and Xishuangbanna. Admixtures were also detected, reflecting hybridization and migration events between the populations. The genetic background of the Indian germplasm is heterogeneous, indicating that the Indian cucumbers maintain a large proportion of the genetic diversity and that only a small fraction was introduced to other parts of the world. Subsequently, we defined a core collection consisting of 115 accessions and capturing over 77% of the SSR alleles. Insight into the genetic structure of cucumber will help developing appropriate conservation strategies and provides a basis for population-level genome sequencing in cucumber.

  9. Sea Cucumbers Metabolites as Potent Anti-Cancer Agents

    Directory of Open Access Journals (Sweden)

    Naveena B. Janakiram

    2015-05-01

    Full Text Available Sea cucumbers and their extracts have gained immense popularity and interest among researchers and nutritionists due to their nutritive value, potential health benefits, and use in the treatment of chronic inflammatory diseases. Many areas of the world use sea cucumbers in traditional foods and folk medicine. Though the actual components and their specific functions still remain to be investigated, most sea cucumber extracts are being studied for their anti-inflammatory functions, immunostimulatory properties, and for cancer prevention and treatment. There is large scope for the discovery of additional bioactive, valuable compounds from this natural source. Sea cucumber extracts contain unique components, such as modified triterpene glycosides, sulfated polysaccharides, glycosphingolipids, and esterified phospholipids. Frondanol A5, an isopropyl alcohol/water extract of the enzymatically hydrolyzed epithelia of the edible North Atlantic sea cucumber, Cucumaria frondosa, contains monosulfated triterpenoid glycoside Frondoside A, the disulfated glycoside Frondoside B, the trisulfated glycoside Frondoside C, 12-methyltetradecanoic acid, eicosapentaenoic acid, and fucosylated chondroitin sulfate. We have extensively studied the efficacy of this extract in preventing colon cancer in rodent models. In this review, we discuss the anti-inflammatory, immunostimulatory, and anti-tumor properties of sea cucumber extracts.

  10. Proteomic Analysis of Cucumber Defense Rresponses Induced by Propamocarb

    Institute of Scientific and Technical Information of China (English)

    WU Peng; QIN Zhi-wei; WU Tao; ZHOU Xiu-yan; XIN Ming; GUO Qian-qian

    2013-01-01

    Propamocarb is an agricultural chemical that has been widely used to protect cucumber plants from downy mildew. To understand the mechanisms of cucumber defense responses to propamocarb, we investigated the physiological and proteomic responses of the cucumber line D0351 with propamocarb application. We found that after treatment with propamocarb, the activities of detoxifying enzymes (glutathione reductase, GR; glutathione S-tramsferase, GST) and soluble sugar content of cucumber fruit were signiifcantly increased, but malonaldehyde (MDA) content was signiifcantly reduced. To identify components of propamocarb responsive signaling, we compared the high resolution two-dimensional gel electrophoresis (2-DE) protein proifles of control and propamocarb-treated fruits, and identiifed 18 differentially expressed (13 up-regulated and 5 down-regulated) proteins induced by propamocarb which were determined by matrix-assisted laser desorption/ionization time-of-lfight mass spectrometry (MALDI-TOF-MS). The majority of the proteins had functions related to detoxication, energy and transport, protein biosynthesis, regulating reactions and defending against stresses. A real-time quantitative reverse transcriptional-polymerase chain reaction (qRT-PCR) was used to compare transcript and protein accumulation patterns for 18 candidate proteins, and the expression of 14 was consistent at both transcript and protein levels. The responses of cucumber proteome to propamocarb seemed complex; the identified proteins may play an important role in regulating adaptation activities following exposure to propamocarb. Data presented herein may shed light on understanding cucumber fruit defense responses under propamocarb treatment.

  11. Sea Cucumbers Metabolites as Potent Anti-Cancer Agents.

    Science.gov (United States)

    Janakiram, Naveena B; Mohammed, Altaf; Rao, Chinthalapally V

    2015-05-12

    Sea cucumbers and their extracts have gained immense popularity and interest among researchers and nutritionists due to their nutritive value, potential health benefits, and use in the treatment of chronic inflammatory diseases. Many areas of the world use sea cucumbers in traditional foods and folk medicine. Though the actual components and their specific functions still remain to be investigated, most sea cucumber extracts are being studied for their anti-inflammatory functions, immunostimulatory properties, and for cancer prevention and treatment. There is large scope for the discovery of additional bioactive, valuable compounds from this natural source. Sea cucumber extracts contain unique components, such as modified triterpene glycosides, sulfated polysaccharides, glycosphingolipids, and esterified phospholipids. Frondanol A5, an isopropyl alcohol/water extract of the enzymatically hydrolyzed epithelia of the edible North Atlantic sea cucumber, Cucumaria frondosa, contains monosulfated triterpenoid glycoside Frondoside A, the disulfated glycoside Frondoside B, the trisulfated glycoside Frondoside C, 12-methyltetradecanoic acid, eicosapentaenoic acid, and fucosylated chondroitin sulfate. We have extensively studied the efficacy of this extract in preventing colon cancer in rodent models. In this review, we discuss the anti-inflammatory, immunostimulatory, and anti-tumor properties of sea cucumber extracts.

  12. In situ localization and tissue distribution of the replication-associated proteins of Cucumber mosaic virus in tobacco and cucumber.

    Science.gov (United States)

    Cillo, Fabrizio; Roberts, Ian M; Palukaitis, Peter

    2002-11-01

    The replication-associated proteins encoded by Cucumber mosaic virus (CMV), the 1a and 2a proteins, were detected by immunogold labeling in two host species of this virus, tobacco (Nicotiana tabacum) and cucumber (Cucumis sativus). In both hosts, the 1a and 2a proteins colocalized predominantly to the vacuolar membranes, the tonoplast. While plus-strand CMV RNAs were found distributed throughout the cytoplasm by in situ hybridization, minus-strand CMV RNAs were barely detectable but were found associated with the tonoplast. In both cucumber and tobacco, 2a protein was detected at higher densities than 1a protein. The 1a and 2a proteins also showed quantitative differences with regard to tissue distributions in tobacco and cucumber. About three times as much 2a protein was detected in CMV-infected cucumber tissues as in CMV-infected tobacco tissues. In tobacco, high densities of these proteins were observed only in vascular bundle cells of minor veins. In contrast, in cucumber, high densities of 1a and 2a proteins were observed in mesophyll cells, followed by epidermis cells, with only low levels being observed in vascular bundle cells. Differences were also observed in the distributions of 2a protein and capsid protein in vascular bundle cells of the two host species. These observations may represent differences in the relative rates of tissue infection in different hosts or differences in the extent of virus replication in vascular tissues of different hosts.

  13. Enhanced transgene expression in sugarcane by co-expression of virus-encoded RNA silencing suppressors.

    Directory of Open Access Journals (Sweden)

    San-Ji Gao

    Full Text Available Post-transcriptional gene silencing is commonly observed in polyploid species and often poses a major limitation to plant improvement via biotechnology. Five plant viral suppressors of RNA silencing were evaluated for their ability to counteract gene silencing and enhance the expression of the Enhanced Yellow Fluorescent Protein (EYFP or the β-glucuronidase (GUS reporter gene in sugarcane, a major sugar and biomass producing polyploid. Functionality of these suppressors was first verified in Nicotiana benthamiana and onion epidermal cells, and later tested by transient expression in sugarcane young leaf segments and protoplasts. In young leaf segments co-expressing a suppressor, EYFP reached its maximum expression at 48-96 h post-DNA introduction and maintained its peak expression for a longer time compared with that in the absence of a suppressor. Among the five suppressors, Tomato bushy stunt virus-encoded P19 and Barley stripe mosaic virus-encoded γb were the most efficient. Co-expression with P19 and γb enhanced EYFP expression 4.6-fold and 3.6-fold in young leaf segments, and GUS activity 2.3-fold and 2.4-fold in protoplasts compared with those in the absence of a suppressor, respectively. In transgenic sugarcane, co-expression of GUS and P19 suppressor showed the highest accumulation of GUS levels with an average of 2.7-fold more than when GUS was expressed alone, with no detrimental phenotypic effects. The two established transient expression assays, based on young leaf segments and protoplasts, and confirmed by stable transgene expression, offer a rapid versatile system to verify the efficiency of RNA silencing suppressors that proved to be valuable in enhancing and stabilizing transgene expression in sugarcane.

  14. Antisense suppression of cucumber (Cucumis sativus L.) sucrose synthase 3 (CsSUS3) reduces hypoxic stress tolerance.

    Science.gov (United States)

    Wang, Hongyun; Sui, Xiaolei; Guo, Jinju; Wang, Zhenyu; Cheng, Jintao; Ma, Si; Li, Xiang; Zhang, Zhenxian

    2014-03-01

    Sucrose synthase (SUS; EC 2.4.1.13) plays important roles in sugar metabolism and abiotic stress response. But the genes encoding SUS in cucumber (Cucumis sativus L.) have not been well studied. Here, we isolated four cucumber sucrose synthase genes (CsSUS). Among them, CsSUS3, which highly expressed in the roots, was chosen for further study. Immunolocalization and subcellular localization analysis indicated that CsSUS3 localized in the cytosol and the plasma membrane, and mainly existed in the companion cells of phloem in the roots. When suffering hypoxia stress from flooding, CsSUS3 expression and SUS activity in roots increased, especially in the lateral roots; moreover, the soluble SUS activity increased clearly, but the membrane fraction hardly changed. Compared with the wild-type cucumbers, the transgenic lines with antisense expression of CsSUS3 were more sensitive to flooding. After 6 d of flooding, the SUS activity, soluble sugar and uridine 5'-diphosphate glucose (UDPG) content and the ratio of ATP/ADP in the roots of transgenic plants were significantly lower than that in wild-type plants. Moreover, the transgenic lines grew more slowly with more yellow necrosis in the leaves. These findings suggested CsSUS3 participated in resisting hypoxic stress. Furthermore, the mechanism of CsSUS3 in resisting hypoxic stress was also discussed.

  15. Predicting keeping quality of batches of numbers of cucumber fruit based on a physiological mechanism

    NARCIS (Netherlands)

    Schouten, R.E.; Tijskens, L.M.M.; Kooten, van O.

    2002-01-01

    The keeping quality for a cucumber, defined as the time the colour remains acceptable to the consumer, depends on the state of the chlorophyll metabolism. By building a physiological model of the chlorophyll metabolism for cucumbers and using colour data from cucumbers stored at 12, 20 and 28 °C,

  16. Detection of fruit fly infestation in pickling cucumbers using a hyperspectral reflectance/transmittance imaging system

    Science.gov (United States)

    Fruit fly infestation can be a serious problem in pickling cucumber production. In the United States and many other countries, there is zero tolerance for fruit flies in pickled cucumber products. Currently, processors rely on manual inspection to detect and remove fruit fly-infested cucumbers, whic...

  17. Development of automated inspection technology for quality grading of pickling cucumbers

    Science.gov (United States)

    Pickling cucumbers are susceptible to external and internal damage during growth, harvest, transport, and postharvest handling. It is estimated that approximately 5-10% of harvested pickling cucumbers fall into the defect category. Pickling cucumber quality defect can occur in the form of soft or wa...

  18. QTL mapping of parthenocarpic fruit set in North American processing cucumber

    Science.gov (United States)

    Parthenocarpy is a desirable trait with potential for increasing yield and quality in US processing cucumber production. Many successful parthenocarpic fresh market cucumber varieties have been developed, but the genetic and molecular mechanisms for parthenocarpic expression in cucumber is largely u...

  19. Lactobacilli and tartrazine as causative agents of a red colored spoilage in cucumber pickle products

    Science.gov (United States)

    The cucumber pickling industry has sporadically experienced spoilage outbreaks in fermented cucumber products characterized by development of red color on the surface of the cucumbers. Lactobacillus casei and Lactobacillus paracasei were isolated from two outbreaks of this spoilage which occurred a...

  20. Predicting keeping quality of batches of numbers of cucumber fruit based on a physiological mechanism

    NARCIS (Netherlands)

    Schouten, R.E.; Tijskens, L.M.M.; Kooten, van O.

    2002-01-01

    The keeping quality for a cucumber, defined as the time the colour remains acceptable to the consumer, depends on the state of the chlorophyll metabolism. By building a physiological model of the chlorophyll metabolism for cucumbers and using colour data from cucumbers stored at 12, 20 and 28 °C, th

  1. Arabidopsis LOS5 Gene Enhances Chilling and Salt Stress Tolerance in Cucumber

    Institute of Scientific and Technical Information of China (English)

    LIU Li-ying; DUAN Liu-sheng; ZHANG Jia-chang; MI Guo-quan; ZHANG Xiao-lan; ZHANG Zhen-xian; REN Hua-zhong

    2013-01-01

    Low temperature and high salinity are the major abiotic stresses that restrict cucumber growth and production, breeding materials with multiple abiotic resistance are in greatly need. Here we investigated the effect of introducing the LOS5 gene, a key regulator of ABA biosynthesis in Arabidopsis thaliana, under the stress-responsive RD29A promoter into cucumber (Cucumis sativus L. cv. S516). We found that T1 RD29A-LOS5 transgenic lines have enhanced tolerance to cold and salt stresses. Specifically, transgenic lines exhibited dwarf phenotypes with reduced leaf number, shorter internode, decreased length of the biggest leaf, fewer female flowers, shorter fruit neck and lower vitamin C (Vc). The increased cold tolerance can be reflected from the significantly decreased cold index, the reduced electrolyte leakage index and the MDA content upon cold treatment as compared to those in the control. This may result from the accumulation of internal ABA, soluble sugars and proline, and the enhanced activities of protective enzymes superoxide dismutase (SOD), peroxidase (POD) and catalase (CAT) in the transgenic lines. Under salt treatment, the transgenic lines exhibited increased germination index, vigor index, more lateral roots and increased root fresh weight. Moreover, RD29A-LOS5 transgenic plants displayed quicker responses in salt stress than that in low-temperature stress.

  2. Monocyte-Derived Suppressor Cells in Transplantation.

    Science.gov (United States)

    Ochando, Jordi; Conde, Patricia; Bronte, Vincenzo

    Myeloid-derived suppressor cells (MDSC) are cells of myeloid origin with enhanced suppressive function. They are negative regulators of the immune responses and comprise a heterogeneous mixture of immunosuppressive cells of monocytic (M-MDSC) and granulocytic (G-MDSC) origin. A more recent nomenclature proposes the term "suppressive monocyte derived cells" (suppressive MCs) to define CSF1/CSF2-dependent mouse suppressor cells that develop from common monocyte progenitors (cMoPs) after birth. Here, we review the literature about monocytic-derived cells with demonstrated suppressor function in vitro and in vivo within the context of solid organ transplantation.

  3. Influence of Fertilization System on the Quality of Cucumbers

    Directory of Open Access Journals (Sweden)

    Gheorghe CÎMPEANU

    2013-05-01

    Full Text Available Different types of cucumbers culture, respectively organic system and the system of chemical and organic fertilization can influence vegetable quality. The present study was carried out in a solarium on a farm, in six experimental variants, three replications. Three variants for fertilization systems with two cucumbers cultivars were used. The biological material used in the experiments consisted of the cultivars ‘Triumf’ F1 and ‘Mirabelle’ F1. Fertilization systems used were organic with manure, classic with chemical fertilizers and soluble complex fertilizers with fertigation. In the present research agrochemical and biochemical characteristics were analysed and also weight of fruits and yield on plants and kg/m2 were measured. Agrochemical characteristics were: contents of nitrates, phosphorus and potassium from cucumbers and the biochemical characteristics measured were: acidity, soluble carbohydrates, vitamin C and dry matter. The results showed that the fertilization with soluble complex fertilizers in addition with fertigation assured the entire necessary for the growth and fructification of cucumbers. The presence of chemical fertilizers do not influence in a negative way the nitrates, phosphorus and potassium content and the quality of consumption of cucumbers was assured. Regarding the cultivars the best yield and quality results were obtained to ‘Mirabelle’ F1.

  4. Sea Cucumber: New source of Protein for Human Consumption

    Directory of Open Access Journals (Sweden)

    Daniela Vaz Pratas

    2014-06-01

    Full Text Available Aquaculture, probably the fastest growing food-producing sector, now accounts for nearly 50 percent of the world's food fish consumed by humans, and this share is expected to increase further to meet future demand. Sea cucumbers are considered highly marketable product and this has resulted in an increasing overfishing of natural sea cucumber stocks. Nevertheless, these resources are almost unexploited in the Mediterranean region. Many species of holothurians have been recognized as an alternative source of first quality protein and considered a putative functional food, like hypocholesterolemic proprieties and contain many other bioactive compounds. Therefore, the aim of the present study was to determine and compare the protein content of two sea cucumber species, Holothuria forskali and Stichopus regalis. The Kjeldahl method was used to determine the crude protein through the measurement of nitrogen amount in each sample. The obtained results demonstrated that both species contain high protein levels, with higher results for S. regalis, which revealed values between 19,1% and 20,4%. H. forskali showed a protein level among 12,1% and 15,4%. Holothurian protein levels reveal great potential for human consumption. Those resources can be used as a partial substitute of fish meal (eg. sea bream nutrition, either to intern market as well as for exportation to Asian countries. Sea cucumber farming could have lucrative potential in the Mediterranean, converting sea cucumbers into aquaculture value-added products bringing to this region profitable economic benefits.

  5. Suppressor cells in transplantation tolerance II. Maturation of suppressor cells in the bone marrow chimera

    Energy Technology Data Exchange (ETDEWEB)

    Tutschka, P.J.; Ki, P.F.; Beschorner, W.E.; Hess, A.D.; Santos, G.W.

    1981-10-01

    Histoincompatible bone marrow allografts were established in lethally irradiated rats. At various times after transplantation, the spleen cells were harvested, subjected to mixed lymphocyte cultures, and assayed for suppressor cells in vitro and in vivo by adoptive transfer studies. Alloantigen-nonspecific suppressor cells appeared in the chimera at 40 days after grafting, coinciding with the resolution of graft-versus-host disease (GVHD). At 250 days the nonspecific suppressor cells were replaced by suppressor cells specifically suppressing donor-versus-host alloantigen responses. At 720 days suppressor cells could no longer be identified by in vitro methods but were identified by in vivo adoptive transfer of transplantation tolerance. After injection of host-type antigen into chimeras, the suppressor cells could be again demonstrated by in vitro methods.

  6. Suppressor cells in transplantation tolerance. II. maturation of suppressor cells in the bone marrow chimera

    Energy Technology Data Exchange (ETDEWEB)

    Tutschka, P.J.; Ki, P.F.; Beschorner, W.E.; Hess, A.D.; Santos, G.W.

    1981-10-01

    Histoincompatible bone marrow allografts were established in lethally irradiated rats. At various times after transplantation, the spleen cells were harvested, subjected to mixed lymphocyte cultures, and assayed for suppressor cells in vitro and in vivo by adoptive transfer studies. Alloantigen-nonspecific suppressor cells appeared in the chimera at 40 days after grafting, coinciding with the resolution of graft-versus-host disease (GVHD). At 250 days the nonspecific suppressor cells were replaced by suppressor cells specifically suppressing donor-versus-host alloantigen responses. At 720 days suppressor cells could no longer be identified by in vitro methods but were identified by in vivo adoptive transfer of transplantation tolerance. After injection of host-type antigen into chimeras, the suppressor cells could be again demonstrated by in vitro methods.

  7. Notch as a tumour suppressor.

    Science.gov (United States)

    Nowell, Craig S; Radtke, Freddy

    2017-03-01

    The Notch signalling cascade is an evolutionarily conserved pathway that has a crucial role in regulating development and homeostasis in various tissues. The cellular processes and events that it controls are diverse, and continued investigation over recent decades has revealed how the role of Notch signalling is multifaceted and highly context dependent. Consistent with the far-reaching impact that Notch has on development and homeostasis, aberrant activity of the pathway is also linked to the initiation and progression of several malignancies, and Notch can in fact be either oncogenic or tumour suppressive depending on the tissue and cellular context. The Notch pathway therefore represents an important target for therapeutic agents designed to treat many types of cancer. In this Review, we focus on the latest developments relating specifically to the tumour-suppressor activity of Notch signalling and discuss the potential mechanisms by which Notch can inhibit carcinogenesis in various tissues. Potential therapeutic strategies aimed at restoring or augmenting Notch-mediated tumour suppression will also be highlighted.

  8. Biological and Molecular Characterization of Cucumber mosaic virus Subgroup II Isolate Causing Severe Mosaic in Cucumber.

    Science.gov (United States)

    Kumari, Reenu; Bhardwaj, Pooja; Singh, Lakhmir; Zaidi, Aijaz A; Hallan, Vipin

    2013-06-01

    Cucumber mosaic virus (CMV) has a wide host range causing severe damage in many important agricultural and ornamental crops. Earlier reports showed the prevalence of CMV subgroup I isolates in India. However, some recent reports point towards increasing incidence of subgroup II isolates in the country. The complete genome of a CMV isolate causing severe mosaic in cucumber was characterized and its phylogenetic analysis with other 21 CMV isolates reported worldwide clustered it with subgroup II strains. The genome comprised of RNA 1 (3,379 nucleotides), RNA 2 (3,038 nucleotides) and RNA 3 (2,206 nucleotides). The isolate showed highest homology with subgroup II isolates: 95.1-98.7, 87.7-98.0, and 85.4-97.1 % within RNA1, RNA2, and RNA3, respectively. RNA1 and RNA2 were closely related to the Japanese isolate while RNA3 clustered with an American isolate. Host range studies revealed that isolate showed severe mosaic symptoms on Nicotiana spp. and Cucumis spp. The isolate induced leaf deformation and mild filiform type symptoms in tomato. To best of our knowledge this is the first report of complete genome of CMV subgroup II isolate from India.

  9. THE IMPACT OF SILICON ON TRANSCRIPTS RELATED TO CUCUMBER MOSAIC VIRUS INFECTION IN CUCUMBER.

    Science.gov (United States)

    Holz, S; Kube, M; Bartoszewski, G; Büttner, C

    2015-01-01

    The role of soluble silicon (Si) in alleviating viral plant infections is largely unknown. In order to analyse this gap in knowledge, this study provides insights into the relative gene expression data obtained from 1) control, 2) Cucumber mosaic virus (CMV)-infected and 3) sodium silica-treated, CMV-infected Cucumis sativus line B10 tissue cultures regenerated plants. The absence or presence of CMV was determined through RT-PCR, six days' post-inoculation. qRT-PCR was performed on five selected host genes related to CMV-defence (argonaute protein, WRKY transcription factor) and replication (chaperone, heat shock cognate protein, aquaporin). Relative gene expressions from Si-treated, CMV-infected clones were not significantly different from CMV-infected clones, but they were significantly different from the control plants. The upregulation of the chaperone, and heat shock cognate genes in Si-treated clones, is associated with enhanced virus replication, while the gene expression of the transcription factor increases and is related to defence, in contrast to decreased expression in CMV-infected clones. Aquaporin gene expression was downregulated and the argonaute expression was unaffected in both Si-treated, CMV-infected as well as CMV-infected clones. Since both alleviating and supportive gene shifts are observed in Si-treated plantlets for key genes related to the virus infection examined herein, sodium silica is suggested to have a neutral and limited impact on CMV infection in cucumber cultures.

  10. An Improved Bioassay for Cytokinins Using Cucumber Cotyledons 1

    Science.gov (United States)

    Fletcher, R. A.; Kallidumbil, V.; Steele, P.

    1982-01-01

    The cucumber cotyledon greening bioassay is frequently used for detecting cytokinins. Beneficial modifications of the original technique included using 5-day-old cucumber (Cucumus sativus L., cv. National Pickling) cotyledons treated with combinations of 40 millimolar KCl and various concentrations of cytokinins. A dark incubation period of 20 hours was followed by an exposure to light for 3.5 hours. Under these conditions, extremely low (0.0001 milligram per liter) concentrations of N6-benzyladenine, zeatin, kinetin, or zeatin riboside can be detected. Of the four cytokinins tested, kinetin appeared to be the least active. With these improvements, the assay is 10 times more sensitive than is the previously described cucumber cotyledon greening bioassay for cytokinins. PMID:16662273

  11. An improved bioassay for cytokinins using cucumber cotyledons.

    Science.gov (United States)

    Fletcher, R A; Kallidumbil, V; Steele, P

    1982-03-01

    The cucumber cotyledon greening bioassay is frequently used for detecting cytokinins. Beneficial modifications of the original technique included using 5-day-old cucumber (Cucumus sativus L., cv. National Pickling) cotyledons treated with combinations of 40 millimolar KCl and various concentrations of cytokinins. A dark incubation period of 20 hours was followed by an exposure to light for 3.5 hours. Under these conditions, extremely low (0.0001 milligram per liter) concentrations of N(6)-benzyladenine, zeatin, kinetin, or zeatin riboside can be detected. Of the four cytokinins tested, kinetin appeared to be the least active. With these improvements, the assay is 10 times more sensitive than is the previously described cucumber cotyledon greening bioassay for cytokinins.

  12. Molds in Brined Cucumbers: Cause of Softening During Air-Purging of Fermentations †

    Science.gov (United States)

    Costilow, Ralph N.; Gates, Karen; Lacy, Melvyn L.

    1980-01-01

    Softening of cucumbers in fermentations purged at high air-flow rates was caused by molds growing in the brined cucumbers, not in the brine. This conclusion is based on the following results: (i) no microorganisms were isolated in significant numbers from brines that caused softening of pasteurized brined cucumbers, (ii) no pectinolytic enzyme activities were produced in cucumber brines in the absence of cucumbers, (iii) the pickles in some air-purged fermentations became very soft without the appearance of any pectinolytic enzyme activity in the brine, (iv) mold hyphae were consistently observed in tissues of soft pickles, (v) molds consistently developed in cultures of slices of surface sterilized cucumbers taken from fermentations in which soft pickles were subsequently found, and (vi) molds belonging to the genera Alternaria, Fusarium, and Mucor isolated from slices all softened pasteurized brined cucumbers. Images PMID:16345619

  13. Plant science. Biosynthesis, regulation, and domestication of bitterness in cucumber.

    Science.gov (United States)

    Shang, Yi; Ma, Yongshuo; Zhou, Yuan; Zhang, Huimin; Duan, Lixin; Chen, Huiming; Zeng, Jianguo; Zhou, Qian; Wang, Shenhao; Gu, Wenjia; Liu, Min; Ren, Jinwei; Gu, Xingfang; Zhang, Shengping; Wang, Ye; Yasukawa, Ken; Bouwmeester, Harro J; Qi, Xiaoquan; Zhang, Zhonghua; Lucas, William J; Huang, Sanwen

    2014-11-28

    Cucurbitacins are triterpenoids that confer a bitter taste in cucurbits such as cucumber, melon, watermelon, squash, and pumpkin. These compounds discourage most pests on the plant and have also been shown to have antitumor properties. With genomics and biochemistry, we identified nine cucumber genes in the pathway for biosynthesis of cucurbitacin C and elucidated four catalytic steps. We discovered transcription factors Bl (Bitter leaf) and Bt (Bitter fruit) that regulate this pathway in leaves and fruits, respectively. Traces in genomic signatures indicated that selection imposed on Bt during domestication led to derivation of nonbitter cucurbits from their bitter ancestors.

  14. Mechanistic study of programmed cell death of root border cells of cucumber (Cucumber sativus L.) induced by copper.

    Science.gov (United States)

    Sun, Lijuan; Song, Jie; Peng, Cheng; Xu, Chen; Yuan, Xiaofeng; Shi, Jiyan

    2015-12-01

    Programmed cell death (PCD) in root border cells (RBCs) induced by Copper (Cu) has been little studied. This study explored whether Cu induced PCD in RBCs of cucumber or not and investigated the possible mechanisms. The results showed that the percentage of apoptotic and necrotic RBCs increased with increasing concentration of Cu treatment. A quick burst of ROS in RBCs was detected, while mitochondrial membrane potential (ΔΨm) decreased sharply with Cu treatment. Caspase-3 like protease activity showed a tendency of increase with Cu treatment. The potential of Cu to induce PCD in RBCs of cucumber was first proved. Our results showed that ROS generation and mitochondrial membrane potential loss played important roles in Cu-induced caspase-3-like activation and PCD in RBCs of cucumber, which provided new insight into the signaling cascades that modulate Cu phytotoxicity mechanism.

  15. Lateral Concepts

    Directory of Open Access Journals (Sweden)

    Christopher Gad

    2016-06-01

    Full Text Available This essay discusses the complex relation between the knowledges and practices of the researcher and his/her informants in terms of lateral concepts. The starting point is that it is not the prerogative of the (STS scholar to conceptualize the world; all our “informants” do it too. This creates the possibility of enriching our own conceptual repertoires by letting them be inflected by the concepts of those we study. In a broad sense, the lateral means that there is a many-to-many relation between domains of knowledge and practice. However, each specific case of the lateral is necessarily immanent to a particular empirical setting and form of inquiry. In this sense lateral concepts are radically empirical since it locates concepts within the field. To clarify the meaning and stakes of lateral concepts, we first make a contrast between lateral anthropology and Latour’s notion of infra-reflexivity. We end with a brief illustration and discussion of how lateral conceptualization can re-orient STS modes of inquiry, and why this matters.

  16. Survival of Salmonella Newport on Whole and Fresh-Cut Cucumbers Treated with Lytic Bacteriophages.

    Science.gov (United States)

    Sharma, Manan; Dashiell, Gwendolyn; Handy, Eric T; East, Cheryl; Reynnells, Russell; White, Chanelle; Nyarko, Esmond; Micallef, Shirley; Hashem, Fawzy; Millner, Patricia D

    2017-04-01

    Salmonella enterica associated with consumption of cucumbers ( Cucumis sativus ) has led to foodborne outbreaks in the United States. Whole and fresh-cut cucumbers are susceptible to S. enterica contamination during growing, harvesting, and postharvest handling. The application of lytic bacteriophages specific for S. enterica was evaluated to reduce Salmonella populations on cucumbers. Unwaxed cucumbers ('Lisboa' variety, or mini-cucumbers purchased at retail) were inoculated with Salmonella Newport (5 log CFU per cucumber) and were sprayed with 3.2 mL of phosphate-buffered saline (control) or 10 log PFU/ml of SalmoFresh, a Salmonella-specific bacteriophage preparation (phage), to deliver 4.76 × 10(7) PFU/cm(2). Cucumbers were stored at 10 or 22°C for 7 days. Inoculated mini-cucumbers were sliced with a sterile knife to investigate Salmonella transfer to mesocarp, and cut pieces were stored at 4°C for 2 days. Populations (log CFU per cucumber) of Salmonella Newport on phage-treated whole cucumbers were significantly (P cucumbers (4.27 ± 0.37) on day 0. Populations on phage-treated cucumbers stored at 10°C were 1.72 ± 0.77 and 1.56 ± 0.46, which were significantly lower than those on control-treated cucumbers (3.20 ± 0.48 and 2.33 ± 0.25) on days 1 and 4, respectively. Between days 0 and 1, populations on control-treated cucumbers stored at 10 and 22°C declined by 1.07 and 2.47 log CFU per cucumber, respectively. At 22°C, Salmonella Newport populations declined by 2.37 log CFU per cucumber between days 0 and 1. Phage application to whole cucumbers before slicing did not reduce the transfer of Salmonella Newport to fresh-cut slices. Lytic phage application may be a potential intervention to reduce Salmonella populations on whole cucumbers.

  17. Functional compatibility in cucumber mycorrhizas in terms of plant growth performance and foliar nutrient composition.

    Science.gov (United States)

    Ravnskov, S; Larsen, J

    2016-09-01

    Functional compatibility in cucumber mycorrhizas in terms of plant and fungal growth, and foliar nutrient composition from all possible combinations of six cucumber varieties and three species of arbuscular mycorrhizal (AM) fungi was evaluated. Measurements of foliar nutrient composition included N, P, K, Mg, Ca, Na, Fe, Zn, Mn and Cu. Growth of AM fungi was measured in terms of root colonisation, as examined with microscopy and the AM fungus biomarker fatty acid 16:1ω5 from both phospholipids and neutral lipids. Different responses of plant growth and foliar nutrient profiles were observed for the different AM symbioses examined. The AM fungus Claroideoglomus claroideum caused growth depression in association with four out of six cucumber varieties; Rhizophagus irregularis caused growth promotion in one of six cucumber varieties; whereas Funneliformis mosseae had no effect on the growth performance of any of the cucumber varieties examined. All three AM fungi markedly altered host plant shoot nutrient composition, with the strongest contrast observed between cucumber-R. irregularis symbioses and non-mycorrhizal cucumber plants, independent of cucumber variety. On the other hand, AM fungal growth in roots differed between the three AM fungi, but was unaffected by host genotype. Strong build-up of storage lipids was observed for R. irregularis, which was more moderate in the two other AM fungi. In conclusion, strong differential responses of cucumber varieties to inoculation with different AM fungi in terms of growth and shoot nutrient composition revealed high functional diversity in AM symbioses in cucumber plants.

  18. SENSORY ANALYSIS OF CUCUMBER VARIETIES AT DIFFERENT HARVEST TIMES I. SALAD CUCUMBERS

    Directory of Open Access Journals (Sweden)

    Galina PEVICHAROVA

    2007-11-01

    Full Text Available During the period 2001-2002 sensory analysis of six salad cucumber varieties was carried out. The aim of this experiment was to assess the influence of the harvest time on the fruit sensory properties. Flesh colour was the most stable character while appearance, skin colour, aroma, texture, taste and total sensory evaluation varied during the three investigated harvest periods. Two-way analysis of variance proved significant effect of the varieties, harvest time and its interaction on all sensory characters. Depending on the harvest time some of the varieties changed their places one toward other by total sensory evaluation. Therefore, it could not be made reliable conclusions of data obtained from one harvest time. The number of harvest times as well as the number of vegetations should be more then one in order to receive more accurate information for sensory characteristics.

  19. The genome of the cucumber, Cucumis sativus L.

    NARCIS (Netherlands)

    Huang, S.W.; Li, R.Q.; Vossen, van der E.A.G.

    2009-01-01

    Cucumber is an economically important crop as well as a model system for sex determination studies and plant vascular biology. Here we report the draft genome sequence of Cucumis sativus var. sativus L., assembled using a novel combination of traditional Sanger and next-generation Illumina GA sequen

  20. In vitro flowering and pollen viability of cucumber

    Science.gov (United States)

    Flowers were produced on sterile cucumber (Cucumis sativus L.) plants grown in vitro from seed or from micropropagated shoots from stem fragments. Highest numbers of flowers on plants from both sources were produced on hormone-free MS medium as well as with 6 µM of kinetin (MSK). Plants cultured on ...

  1. A sequencing-based linkage map of cucumber

    Science.gov (United States)

    Genetic maps are important tools for molecular breeding, gene cloning, and study of meiotic recombination. In cucumber (Cucumis sativus L.), the marker density, resolution and genome coverage of previously developed genetic maps using PCR-based molecular markers are relatively low. In this study we ...

  2. High sequence conservation among cucumber mosaic virus isolates from Lily

    NARCIS (Netherlands)

    Chen, Y.K.; Derks, A.F.L.M.; Langeveld, S.; Goldbach, R.; Prins, M.

    2001-01-01

    For classification of Cucumber mosaic virus (CMV) isolates from ornamental crops of different geographical areas, these were characterized by comparing the nucleotide sequences of RNAs 4 and the encoded coat proteins. Within the ornamental-infecting CMV viruses both subgroups were represented. CMV i

  3. An integrated genetic and cytogenetic map of the cucumber genome.

    Directory of Open Access Journals (Sweden)

    Yi Ren

    Full Text Available The Cucurbitaceae includes important crops such as cucumber, melon, watermelon, squash and pumpkin. However, few genetic and genomic resources are available for plant improvement. Some cucurbit species such as cucumber have a narrow genetic base, which impedes construction of saturated molecular linkage maps. We report herein the development of highly polymorphic simple sequence repeat (SSR markers originated from whole genome shotgun sequencing and the subsequent construction of a high-density genetic linkage map. This map includes 995 SSRs in seven linkage groups which spans in total 573 cM, and defines approximately 680 recombination breakpoints with an average of 0.58 cM between two markers. These linkage groups were then assigned to seven corresponding chromosomes using fluorescent in situ hybridization (FISH. FISH assays also revealed a chromosomal inversion between Cucumis subspecies [C. sativus var. sativus L. and var. hardwickii (R. Alef], which resulted in marker clustering on the genetic map. A quarter of the mapped markers showed relatively high polymorphism levels among 11 inbred lines of cucumber. Among the 995 markers, 49%, 26% and 22% were conserved in melon, watermelon and pumpkin, respectively. This map will facilitate whole genome sequencing, positional cloning, and molecular breeding in cucumber, and enable the integration of knowledge of gene and trait in cucurbits.

  4. An autonomous robot for harvesting cucumbers in greenhouses

    NARCIS (Netherlands)

    Henten, van E.J.; Hemming, J.; Tuijl, van B.A.J.; Kornet, J.G.; Meuleman, J.; Bontsema, J.; Os, van E.A.

    2002-01-01

    This paper describes the concept of an autonomous robot for harvesting cucumbers in greenhouses. A description is given of the working environment of the robot and the logistics of harvesting. It is stated that for a 2 ha Dutch nursery, 4 harvesting robots and one docking station are needed during t

  5. Rationalization of a genebank cucumber collection with SSR markers

    NARCIS (Netherlands)

    Dooijeweert, van W.; Treuren, van R.

    2012-01-01

    The CGN cucumber (Cucumis sativus) collection consists of 937 accessions. The majority of accessions originated from the working collection of the former Institute for Horticultural Plant Breeding (IVT), where they were used for breeding. The collection mainly includes old cultivars received from Du

  6. Fine mapping of paternal sorting of mitochondria (psm) in cucumber

    Science.gov (United States)

    Cucumber is unique among plants because its mitochondrial DNA shows paternal transmission, is one of the largest known among all plants, due largely to short repetitive DNA motifs, and undergoes recombination among repeats to produce rearranged mitochondrial DNAs associated with strongly mosaic (MSC...

  7. An autonomous robot for harvesting cucumbers in greenhouses

    NARCIS (Netherlands)

    Henten, van E.J.; Hemming, J.; Tuijl, van B.A.J.; Kornet, J.G.; Meuleman, J.; Bontsema, J.; Os, van E.A.

    2002-01-01

    This paper describes the concept of an autonomous robot for harvesting cucumbers in greenhouses. A description is given of the working environment of the robot and the logistics of harvesting. It is stated that for a 2 ha Dutch nursery, 4 harvesting robots and one docking station are needed during t

  8. In vitro auxin binding to cellular membranes of cucumber fruits.

    Science.gov (United States)

    Narayanan, K R; Mudge, K W; Poovaiah, B W

    1981-04-01

    Specific binding of 1-naphthaleneacetic acid (NAA) to crude membrane preparations from cucumber (Cucumis sativus L.) was demonstrated. This in vitro binding had a pH optimum of 3.75 and an equilibrium dissociation constant of 10 to 20 micromolar with 1250 picomoles binding sites per gram fresh weight. The NAA-binding sites were pronase sensitive. The supernatant from the fruit partially inhibited the in vitro NAA binding to fruit membranes. NAA, 2-naphthoxyacetic acid, 3-indoleacetic acid, 2-4-dichlorophenoxyacetic acid, and 2,3,5-triiodobenzoic acid, which are reported to be very good inducers of parthenocarpy in cucumber, showed a high degree of specific binding to cucumber fruit membranes. In comparison, 2-naphthaleneacetic acid and indolepropionic acid, which are reported to be very weak auxins in corn coleoptile, pea stem, and strawberry fruit growth bioassays, did not bind efficiently to cucumber fruit membranes. In vitro binding studies with fruit membranes suggest that auxin stimulated fruit growth may be mediated by membrane-associated, auxin-binding protein(s).

  9. Genetic diversity and population structure of cucumber (Cucumis sativus L.)

    NARCIS (Netherlands)

    Lv, J.; Qi, J.; Shi, Q.; Shen, D.; Zhang, S.; Shao, G.; Li, H.; Sun, Z.; Weng, Y.; Shang, Y.; Gu, X.; Li, X.; Zhu, X.; Zhang, J.; Treuren, van R.; Dooijeweert, van W.; Zhang, Z.; Huang, S.

    2012-01-01

    Knowing the extent and structure of genetic variation in germplasm collections is essential for the conservation and utilization of biodiversity in cultivated plants. Cucumber is the fourth most important vegetable crop worldwide and is a model system for other Cucurbitaceae, a family that also incl

  10. Proteomic Analysis of Fruit Bending in Cucumber (Cucumis sativus L.)

    Institute of Scientific and Technical Information of China (English)

    WANG Li-li; ZHANG Peng; QIN Zhi-wei; ZHOU Xiu-yan

    2014-01-01

    In cucumber, fruit shape is an important quality criterion, and fruit bending is known to limit growth, yield, and taste. To investigate the post-transcriptional changes that regulate fruit bending and to better understand the underlying molecular mechanisms, we generated a proteomic proifle of the abdomen and back of cucumber bending fruit. Two-dimensional gel electrophoresis (2-DE) allowed the detection of approximately 900 distinct protein spots in each gel, 32 of which were differentially expressed in the abdomen and back of bending cucumber fruit. Ten of the differentially expressed proteins were analyzed using matrix-assisted laser ionization time of lfight mass spectrometry (MALDI-TOF/MS). A search of primary databases showed that the identiifed proteins are involved in various metabolic processes and cellular responses, including photosynthesis metabolism, energy metabolism, defense and stress response, and regulation. The identiifed proteins included large subunits of ribulose-1,5-bisphosphate carboxylase/oxygenase, which are involved in photosynthesis and photorespiratory metabolism, and isocitrate dehydrogenase, which is involved in the tricarboxylic acid cycle. It is possible that imbalances in catabolic and anabolic processes directly affect the bending of cucumber fruit. The predicted function of the cobalamin-independent methionine synthase isozyme is closely related to ethylene biosynthesis; fruit bending may be regulated by ethylene, or by ethylene signaling crosstalk during fruit development. The 14-3-3 protein is usually considered to be a regulation-related protein, which plays a role in regulating cell hyperplasia, cell differentiation during growth, and apoptosis during senescence. Involvement of guanosine triphosphate (GTP)-binding proteins in signal transmission is known to regulate the development of cells in cucumber fruits and to play a role in fruit shape variation. Patterns of protein expression showed high repeatability. We hypothesize

  11. Sea cucumber species identification of family Caudinidae from Surabaya based on morphological and mitochondrial DNA evidence

    Science.gov (United States)

    Amin, Muhammad Hilman Fu'adil; Pidada, Ida Bagus Rai; Sugiharto, Widyatmoko, Johan Nuari; Irawan, Bambang

    2016-03-01

    Species identification and taxonomy of sea cucumber remains a challenge problem in some taxa. Caudinidae family of sea cucumber was comerciallized in Surabaya, and it was used as sea cucumber chips. Members of Caudinid sea cucumber have similiar morphology, so it is hard to identify this sea cucumber only from morphological appearance. DNA barcoding is useful method to overcome this problem. The aim of this study was to determine Caudinid specimen of sea cucumber in East Java by morphological and molecular approach. Sample was collected from east coast of Surabaya, then preserved in absolute ethanol. After DNA isolation, Cytochrome Oxydase I (COI) gene amplification was performed using Echinoderm universal primer and PCR product was sequenced. Sequencing result was analyzed and identified in NCBI database using BLAST. Results showed that Caudinid specimen in have closely related to Acaudina molpadioides sequence in GenBank with 86% identity. Morphological data, especially based on ossicle, also showed that the specimen is Acaudina molpadioides.

  12. [Effects of rotation and intercropping on bacterial communities in rhizosphere soil of cucumber].

    Science.gov (United States)

    Wu, Feng-zhi; Wang, Shu; Yang, Yang

    2008-12-01

    By the method of PCR-DGGE, this paper studied the effects of rotation with wheat, soybean, villose vetch, clover, and alfalfa and intercropping with onion and garlic on the bacterial communities in rhizosphere soil of cucumber. The results showed that rotation and intercropping with test plants increased the diversity and evenness indices of bacterial communities in cucumber rhizosphere soil, and also, cucumber yield. The sequencing of DGGE bands indicated that most of the bands had high homology with uncultured bacterial species, and were of Sphingobacterium and Proteobacteria. High bacterium G+C was only detected when cucumber was intercropped with onion. The diversity of soil bacterial communities varied with the growth stages of cucumber, being the highest at vigorous fruiting stage. It was suggested that intercropping with onion and rotation with wheat were the best cultivation modes of cucumber.

  13. Relationship between dieldrin uptake in cucumber and solvent-extractable residue in soil.

    Science.gov (United States)

    Sakai, Mizuki; Seike, Nobuyasu; Murano, Hirotatsu; Otani, Takashi

    2009-12-09

    To prevent the distribution of cucumbers with dieldrin contamination exceeding the limit set by the Japanese Food Sanitation Law, the extraction solvent for dieldrin-contaminated soil was selected prior to cultivation so that the dieldrin residue level in cucumber could be predicted. The exhaustive extraction from soil could not explain the dieldrin uptake by cucumber plants. However, significant correlation (R(2) = 0.966, P dieldrin concentrations in cucumber and dieldrin concentrations extracted with 50% (v/v) methanol-water solution from soils. This was a result of the phytoavailability of dieldrin to the cucumber plants. The extractability of soil dieldrin with the methanol-water solution decreased as the organic carbon content in the soils increased. This suggested that a 50% (v/v) methanol-water solution is the optimal solution for predicting dieldrin concentrations in cucumbers by soil analysis.

  14. Gravity-induced modification of auxin transport and distribution for peg formation in cucumber seedlings

    Science.gov (United States)

    Kamada, M.; Fujii, N.; Higashitani, A.; Takahashi, H.

    Cucumber seedlings grown in microgravity developed a peg on each side of the transition zone between hypocotyl and root, whereas seedlings grown in a horizontal position on the ground developed a peg on the concave (lower) side of the gravitropically bending transition zone. Using an auxin-inducible gene, CS-IAA1, we showed that upon gravistimulation the auxin concentration on the upper side of the horizontally placed transition zone is reduced to a level below the threshold necessary for peg formation. In this study, to elucidate the role of auxin in the lateral placement of peg formation, we measured the contents of endogenous auxin in the transition zone. The content of free IAA was lower and conjugated IAA was more abundant on the upper side of the transition zone of the gravistimulated seedlings compared with the lower side. These results support the idea that a decrease in auxin level due to a modification of auxin transport or metabolism causes the suppression of peg formation on the upper side of the transition zone in a horizontal position. Cucumber seedlings treated with auxin transport inhibitors exhibited agravitropic growth and developed a peg on each side of the transition zone. Application of auxin transport inhibitors caused an increase in CS-IAA1 mRNA (an auxin-inducible gene) at the transition zone. To analyze auxin transport system for peg formation, we isolated auxin influx carrier, CS-AUX1, and auxin efflux carrier, CS-PIN1, from cucumber plants. The accumulation of CS-AUX1 and CS-PIN1 mRNAs was observed at vascular tissue and epidermis in the transition zone. The level of CS-AUX1 mRNA was lower on the upper side of the transition zone in a horizontal position. The results suggest that the transition zone is an additional source of auxin, and that both influx and efflux of auxin in the cells of the transition zone control cytoplasmic concentration of auxin for peg formation.

  15. Progresses in the Mechanism of Resistance to Fusarium Wilt in Cucumber(Cucumis sativus L.)

    Institute of Scientific and Technical Information of China (English)

    ZHOU Xingang; WU Fengzhi; WANG Xuezheng; YUAN Ye

    2008-01-01

    Fusarium wilt caused by Fusarium oxysporum f.sp.cucumerinum (Owen) is one of the most devastating diseases in cucumber production worldwide.Recent progresses in the mechanism of resistance to Fusarium wilt in cucumber were reviewed in this paper,including pathogenic mechanism of Fusarium oxysporum,the resistance mechanism of cucumber,the heredity of resistance,and the location of resistance genes.Following works should be the location and cloning of resistance genes with molecular biologic methods.

  16. Biological control mechanisms of D-pinitol against powdery mildew in cucumber

    OpenAIRE

    Chen, J; Fernandez, Diana; Wang, D. D.; Chen, Y. J.; Dai, G. H.

    2014-01-01

    D-pinitol is an effective agent for controlling powdery mildew (Podosphaera xanthii) in cucumber. In this study, we determined the mechanisms of D-pinitol in controlling powdery mildew in cucumber plants. We compared P. xanthii development on cucumber leaf surface treated with D-pinitol or water (2 mg ml(-1)) at different time points after inoculation. The germinating conidia, hyphae, and conidiophores of the pathogen were severely damaged by D-pinitol at any time of application tested. The h...

  17. A new distributional record for the sea cucumber Holothuria (Semperothuria) cinerascens (Brandt) from Goa coast

    Digital Repository Service at National Institute of Oceanography (India)

    Shirwaikar, P.; Parulekar, A.H.

    Occurrence of sea cucumber, Holothuria (Semperothuria) cinerascens from intertidal region of Anjuna (Goa) along central west coast of India is reported. Notes on morphological characteristics are given...

  18. Whole-body Microbiota of Sea Cucumber (Apostichopus japonicus) from South Korea for Improved Seafood Management.

    Science.gov (United States)

    Kim, Tae-Yoon; Lee, Jin-Jae; Kim, Bong-Soo; Choi, Sang Ho

    2017-08-31

    Sea cucumber (Apostichopus japonicus) is a popular seafood source in Asia, including South Korea, and its consumption has recently increased with recognition of its medicinal properties. However, because raw sea cucumber contains various microbes, its ingestion can cause foodborne illness. Therefore, analysis of the microbiota in the whole body of sea cucumber can extend our understanding of foodborne illness caused by microorganisms and help to better manage products. We collected 40 sea cucumbers from four different sites in August and November, which are known as the maximum production areas in Korea. The microbiota was analyzed by an Illumina Miseq system, and bacterial amounts were quantified by real-time PCR. The diversity and bacterial amounts in sea cucumber were higher in August than in November. Alpha-, Beta-, and Gammaproteobacteria were common dominant classes in all samples. However, the microbiota composition differed according to sampling time and site. Staphylococcus warneri and Propionibacterium acnes were commonly detected potential pathogens in August and November samples, respectively. The effect of experimental Vibrio parahaemolyticus infection on the indigenous microbiota of sea cucumber was analyzed at different temperatures, revealing clear alterations of Psychrobacter and Moraxella; thus, these shifts can be used as indicators for monitoring infection of sea cucumber. Although further studies are needed to clarify and understand the virulence and mechanisms of the identified pathogens of sea cucumber, our study provides a valuable reference for determining the potential of foodborne illness caused by sea cucumber ingestion and to develop monitoring strategies of products using microbiota information.

  19. Transformation of pickling cucumber with chitinase-encoding genes using Agrobacterium tumefaciens.

    Science.gov (United States)

    Raharjo, S H; Hernandez, M O; Zhang, Y Y; Punja, Z K

    1996-04-01

    Transformation of cucumber cv. Endeavor was attempted using three Agrobacterium tumefaciens strains (a supervirulent leucinopine type, an octopine type and a nopaline type), each harbouring one of three binary vectors which contained an acidic chitinase gene from petunia, and basic chitinase genes from tobacco and bean, respectively, driven by the CaMV 35S promoter. Petiole explants were inoculated with a bacterial suspension (10(8) cells·ml(-1)), cocultivated for 48-96 h and placed on Murashige and Skoog (MS) medium with 5.0 μM each of 2,4-D and BA, 50 mg·l(-1) kanamycin and 500 mg·l(-1) carbenicillin. The frequency of embryogenic callus formation ranged from 0 to 12%, depending on strains/vectors used and length of cocultivation, with the highest being obtained using the leucinopine strain with petunia acidic chitinase gene. The kanamycin-resistant embryogenic calli were used to initiate suspension cultures (in liquid MS medium with 1.0/1.0 μM 2,4-D/BA, 50 mg·l(-1) kanamycin) for multiplication of embryogenic cell aggregates. Upon plating of cell aggregates onto solid MS medium with 1.0/1.0 μM NAA/BA and 50 mg·l(-1) kanamycin, calli continued to grow and later differentiated into plantlets. Transformation by the leucinopine strain and all three vectors was confirmed by PCR amplification of the NPT II gene in transgenic calli and plants, in addition to Southern analysis. Expression of the acidic chitinase gene (from petunia) and both basic chitinase genes (from tobacco and bean) in different transgenic cucumber lines was confirmed by Western analyses.

  20. Tumor suppressor identified as inhibitor of inflammation

    Science.gov (United States)

    Scientists at NCI have found that a protein, FBXW7, which acts as a tumor suppressor, is also important for the reduction in strength of inflammatory pathways. It has long been recognized that a complex interaction exists between cancer causing mechanisms

  1. The status of Cucumber vein yellowing virus in Iran

    Directory of Open Access Journals (Sweden)

    Kaveh BANANEJ

    2014-09-01

    Full Text Available Yellowing symptoms of greenhouse- and open field-grown cucurbit crops are becoming increasingly important in many cucurbit growing regions of the world, and particularly in Iran. A survey was conducted from 2011 to 2012 in eight major cucurbit growing regions in Iran. Yellowing and specifically vein clearing symptoms were observed in many cucumber plants grown in greenhouses and open fields, suggesting the presence of Cucumber vein yellowing virus (CVYV, genus Ipomovirus, family Potyviridae. The identification of CVYV was carried out with a specific triple-antibody sandwich enzyme-linked immunosorbent assay (TAS-ELISA and reverse transcription (RT-PCR. CVYV was detected in 42% of the collected samples, in all surveyed provinces, except Bushehr. CVYV was also detected in melon and cucumber crops grown in open fields. These results indicate that CVYV is widely distributed on these two cucurbit species in the major cucumber growing areas of Iran. CVYV positive samples were also tested, using DAS-ELISA, for the presence of Cucurbit chlorotic yellows virus (CCYV and Cucurbit yellow stunting disorder virus (CYSDV, two criniviruses reported previously to occur in Iran. Double or triple infections of CCYV and CYSDV occurred in 49 of 166 of the CVYV-infected plants. The CVYV and CCYV combined infections were more prevalent than CVYV and CYSDV combined infections. TAS-ELISA positive samples were used to mechanically inoculate healthy cucumber plants, and mild vein yellowing was observed on the inoculated leaves. Identical symptoms were also observed on whitefly inoculated healthy cucumber plants. The presence of CVYV in mechanically and whitefly inoculated plants was confirmed by TAS-ELISA and RT-PCR. Sequence analysis revealed that the Iranian isolate of CVYV was more closely related to Spanish isolates than to isolates from Jordan. Phylogenetic analysis showed that CVYV isolates can be divided into two phylogenetic groups (I and II. Despite the close

  2. Lateral Mixing

    Science.gov (United States)

    2012-11-08

    being made on their analysis. A process we became very curious about was the separation of tendrils of warm salty water from the north wall figure 7...structure, and to remove the effect of internal waves by mapping this structure onto isopycnals. This has been very successful in elucidating lateral...we passed through the same water on multiple passes, and that changes in the horizontal structure of the water mas should be readily apparent from

  3. SCREENING FOR CUCUMBER MOSAIC RESISTANT LINES FROM THE OVULE CULTURE DERIVED DOUBLE HAPLOID CUCUMBERS

    Directory of Open Access Journals (Sweden)

    Parichat Plapung

    2014-01-01

    Full Text Available CMV is one of the major destructive viruses worldwide and commercial CMV resistant cucumber is very rare. Therefore we aimed to establish the ovule derived resistant lines used for the breeding program. Haploid plants of sixty-eight cucumber lines were successfully obtained by culturing the un pollinated ovaries harvested one day before an thesis on a modified MS medium supplemented with BAP and IAA at the ratio of 2:1 which was optimal to induce embryogenesis in most of the tested lines. For whole plant regeneration, another modified MS medium was used supplemented with a combination of 6-Benzylaminopurine (BAP and Indole-3-Acetic Acid (IAA (2:1 or BAP and IAA/6-(gamma, gamma-dimethylallylamino purine (2ip and IAA (5:1 and 5 ppm AgNO3. Ploidy levels of the regenerants were determined by cytological analysis. Thirteen out of 42 clones derived from 14 accessions showed a chromosome number of n = 7 and chloroplast number of 6/pair of guard cell, 24 lines were auto-dihaploid with n = 14 and a chloroplast number of 11-12/pair of guard cell. Twenty-eight Double Haploid (DH lines were mechanically inoculated with CMV and the level of resistance was evaluated by using DAS-ELISA. Ten highly Resistant lines (R included 70S2, 91e, 91.1, 93S4-1, 93S42-, 95S1-2, 95S2 DHS1, 117S2-1-3, 136.1 and 194S1 did not show any virus symptom and gave negative ELISA results. Twelve moderately resistant clones were identified including two clones from line 11, three clones from line 93, four clones from line 91 and one clone each from line 117S2 and 123, whereas clone 11.4 was moderately susceptible. Five DH clones; 117S2-1-1, 117S2-2, 117S2-4, 117S2-7 and 117S2-8were classified as highly susceptible.

  4. Satellite RNAs interfere with the function of viral RNA silencing suppressors

    Directory of Open Access Journals (Sweden)

    Wanxia eShen

    2015-04-01

    Full Text Available Viral satellite RNAs (satRNAs are small subviral RNAs and depend on the helper virus for replication and spread. satRNAs can attenuate helper virus-induced symptoms, the mechanism of which remains unclear. Here, we show that two virus-encoded suppressors of RNA silencing (VSRs, Cucumber mosaic virus (CMV 2b and Tombusvirus P19, suppress hairpin RNA (hpRNA-induced silencing of a β-glucuronidase (GUS gene in Nicotiana benthamiana. This suppression can be overcome by CMV Y-satellite RNA (Y-Sat via the Y-Sat-derived small interfering RNAs (siRNAs, which bind to the VSRs and displace the bound hpGUS-derived siRNAs. We also show that microRNA target gene expression in N. tabacum was elevated by CMV infection, presumably due to function of the 2b VSR, but this upregulation of microRNA target genes was reversed in the presence of Y-Sat. These results suggest that satRNA infection minimizes the effect of VSRs on host siRNA and microRNA-directed silencing. Our results suggest that the high abundance of satRNA-derived siRNAs contributes to symptom attenuation by binding helper virus-encoded VSRs, minimizing the capacity of the VSRs to bind host siRNA and miRNA and interfere with their function.

  5. Gene Expression and Activities of SOD in Cucumber Seedlings Were Related with Concentrations of Mn2+,Cu2+,or Zn2+ Under Low Temperature Stress

    Institute of Scientific and Technical Information of China (English)

    GAO Jun-jie; LI Tao; YU Xian-chang

    2009-01-01

    Effects of increasing Mn2+,Cu2+,or Zn2+ on SOD expressions were studied in cucumber seedlings under low temperature stress.Both gene expressions and activities of Cu/Zn-SOD and Mn-SOD in cucumber seedling leaves were induced by increasing Mn2+,Cu2+,or Zn2+ under low temperature stress,especially 48 h afterwards.The activities of Cu/Zn-SOD and Mn-SOD at 0 and 48 h after treatment were in accordance with their gene expression levels,which implied that the transcriptional regulation plays key roles in regulating their activities at the early stage of low temperature stress.Gene expressions of Cu/Zn-SOD and Mn-SOD declined at 96 h,but Cu/Zn-SOD and Mn-SOD activities still remain high,which suggested that Cu/Zn-SOD and Mn-SOD activities might be regulated by other factors after transcription at the later stage of low temperature stress.Therefore,we concluded that the increasing Mn2+,Cu2+,or Zn2+ could increase the capacity of scavenging ROS in cucumber seedlings under low temperature stress by inducing gene expressions of Cu/Zn-SOD and Mn-SOD,elevating activities of Cu/Zn-SOD,Mn-SOD,or regulating other factors after transcription.

  6. Effect of biocontrol agent Pseudomonas fluorescens 2P24 on soil fungal community in cucumber rhizosphere using T-RFLP and DGGE.

    Directory of Open Access Journals (Sweden)

    Guanpeng Gao

    Full Text Available Fungi and fungal community play important roles in the soil ecosystem, and the diversity of fungal community could act as natural antagonists of various plant pathogens. Biological control is a promising method to protect plants as chemical pesticides may cause environment pollution. Pseudomonas fluorescens 2P24 had strong inhibitory on Rastonia solanacearum, Fusarium oxysporum and Rhizoctonia solani, etc., and was isolated from the wheat rhizosphere take-all decline soils in Shandong province, China. However, its potential effect on soil fungal community was still unknown. In this study, the gfp-labeled P. fluorescens 2P24 was inoculated into cucumber rhizosphere, and the survival of 2P24 was monitored weekly. The amount decreased from 10(8 to 10(5 CFU/g dry soils. The effect of 2P24 on soil fungal community in cucumber rhizosphere was investigated using T-RFLP and DGGE. In T-RFLP analysis, principle component analysis showed that the soil fungal community was greatly influenced at first, digested with restriction enzyme Hinf I and Taq I. However, there was little difference as digested by different enzymes. DGGE results demonstrated that the soil fungal community was greatly shocked at the beginning, but it recovered slowly with the decline of P. fluorescens 2P24. Four weeks later, there was little difference between the treatment and control. Generally speaking, the effect of P. fluorescens 2P24 on soil fungal community in cucumber rhizosphere was just transient.

  7. Cucumber (Cucumis sativus L.) and kabocha squash (Cucurbita moschata Duch).

    Science.gov (United States)

    Nanasato, Yoshihiko; Tabei, Yutaka

    2015-01-01

    We established improved methods for Agrobacterium-mediated transformation of cucumber (Cucumis sativus L.) and kabocha squash (Cucurbita moschata Duch). Vacuum infiltration of cotyledonary explants with Agrobacterium suspension enhanced the Agrobacterium infection efficiency in the proximal regions of explants. Wounding treatment was also essential for kabocha squash. Cocultivation on filter paper wicks suppressed necrosis of explants, keeping regeneration efficacy. Putative transgenic plants were screened by kanamycin resistance and green fluorescent protein (GFP) fluorescence. These putative transgenic plants grew normally and T1 seeds were obtained, and stable integration and transmission of the transgene in T1 generations were confirmed by Southern hybridization and PCR. The average transgenic efficiency for cucumber and kabocha squash was 11.9 ± 3.5 and 9.2 ± 2.9 %, respectively.

  8. Variation of Plant Electrophysiology in Cucumber under Different Water Status

    Institute of Scientific and Technical Information of China (English)

    LI Guo-chen; YU Hai-ye; MA Cheng-lin; WANG Rui

    2005-01-01

    AP and VP were measured in cucumbers under water sufficiency and water stress. The results indicated that, the AP would be evoked by electrical impulse, for water-stressed cucumber, its amplitude could reached more than 40 mV which was obviously greater than that (about 10-20 mV) of plant under well-watered,and no VP came out. Along with the intensity of light increased, the VP appeared going-up trend, and accompanied by evidently spiking electrical signal, for plant under water stress, the VP increased more clearly, but the change of spiking amplitude of AP (about 3 mY) was rather smaller than that (8-10 mY) of plant under well-watered.

  9. Silicon-mediated accumulation of flavonoid phytoalexins in cucumber.

    Science.gov (United States)

    Fawe, A; Abou-Zaid, M; Menzies, J G; Bélanger, R R

    1998-05-01

    ABSTRACT The controversial role of silicon in plant disease resistance, described mostly as a passive mechanical protection, has been addressed. Conclusive evidence is presented that silicon is involved in the increased resistance of cucumber to powdery mildew by enhancing the antifungal activity of infected leaves. This antifungal activity was attributable to the presence of low-molecular-weight metabolites. One of these metabolites, described here as a phytoalexin, was identified as a flavonol aglycone rhamnetin (3,5,3',4'-tetrahydroxy-7-O-methoxyflavone). This is the first report of a phytoalexin for this chemical group in the plant kingdom and of a flavonol phytoalexin in cucumber, a chemical defense long believed to be nonexistent in the family Cucurbitaceae. The antifungal activity of leaf extracts was better expressed after acid hydrolysis, extending to another plant species the concept that some phytoalexins are synthesized as glycosylated phytoalexins or their precursors.

  10. A sulfated alpha-L-fucan from sea cucumber.

    Science.gov (United States)

    Ribeiro, A C; Vieira, R P; Mourão, P A; Mulloy, B

    1994-03-04

    A purified sulfated alpha-L-fucan from the sea cucumber body wall was studied, before and after almost complete desulfation, using methylation analysis and NMR spectroscopy. NMR analysis indicates that 2,4-di-O-sulfo-L-fucopyranose and unsubstituted fucopyranose are present in equal proportions, and that 2-O-sulfo-L-fucopyranose is present in twice that proportion. There is some NMR evidence that a regular repeating sequence of four residues comprises most or all of the polysaccharide chain.

  11. Study on the Resistance of Cucumber to Temperature Stresses

    Institute of Scientific and Technical Information of China (English)

    2000-01-01

    Four cucumber (Cucumis sativus L. ) inbred lines with different resistances to temperature stress were used in this experiment. The seedlings of line Q10 and Q21 that have high resistance to chilling stress also have high resistance to heat stress. The seedlings of line T94 and T55 that have lower resistance to chilling stress also have lower resistance to heat stress. It seems that the resistance of cucumber seedlings to different temperature stresses was similar. The influences of chilling and heat stress on the germination ability of cucumber seeds were different. Under the chilling stress, the germination percentage decreased less, and the germination velocity decreased more,so the germination index decreased significantly. Under the heat stress, the germination percentage and velocity of the seeds with high resistance decreased less and those of the seeds with lower resistance decreased more. The differences among the lines became more evident under the extreme heat condition. The content of chlorophyll decreased under the different temperature stresses, the content of chlorophyll a decreased more than that of chlorophyll b, so the value of chlorophyll a/b decreased.The temperature stress inhibited the photosynthesis of cucumber seedlings significantly. After chilling or heat treatment, the net photosynthetic rate (Pn) decreased remarkably. With the stomatal conductance (Gs) decreased, the stomatal limited value (Is) decreased, the intercellular CO2 concentration (Ci) increased, and both the apparent quantum efficiencies (AQE) and the carboxylation efficiencies (CE) decreased. Results showed that the non-stomatal factors were the main causes of Pn decrease, and the photosynthetic mechanism was destroyed remarkably.

  12. Fruit removal increases root-zone respiration in cucumber

    Science.gov (United States)

    Kläring, H.-P.; Hauschild, I.; Heißner, A.

    2014-01-01

    Background and Aims Many attempts have been made to avoid the commonly observed fluctuations in fruit initiation and fruit growth in crop plants, particularly in cucumber (Cucumis sativus). Weak sinks of the fruit have been assumed to result in low sink/source ratios for carbohydrates, which may inhibit photosynthesis. This study focuses on the effects of low sink–source ratios on photosynthesis and respiration, and in particular root-zone respiration. Methods Mature fruit-bearing cucumber plants were grown in an aerated nutrient solution. The root containers were designed as open chambers to allow measurement of CO2 gas exchange in the root zone. A similar arrangement in a gas-exchange cuvette enabled simultaneous measurements of CO2 exchange in the shoot and root zones. Key Results Reducing the sinks for carbohydrates by removing all fruit from the plants always resulted in a doubling of CO2 exchange in the root zone within a few hours. However, respiration of the shoot remained unaffected and photosynthesis was only marginally reduced, if at all. Conclusions The results suggest that the increased level of CO2 gas exchange in the root zone after removing the carbon sinks in the shoot is due primarily to the exudation of organic compounds by the roots and their decomposition by micro-organisms. This hypothesis must be tested in further experiments, but if proved correct it would make sense to include carbon leakage by root exudation in cucumber production models. In contrast, inhibition of photosynthesis was measurable only at zero fruit load, a situation that does not occur in cucumber production systems, and models that estimate production can therefore ignore (end-product) inhibition of photosynthesis. PMID:25301817

  13. Fine genetic mapping of Cp, a recessive gene for compact (dwarf) plant architecture in cucumber, cucumis sativus L

    Science.gov (United States)

    The compact or dwarf plant architecture is an important trait in cucumber breeding. Compact cucumber has the potential to be used in once-over mechanical harvest of pickling cucumber production. Compact growth habit is controlled by a simply inherited recessive gene. To facilitate markers assisted s...

  14. 40 CFR 174.516 - Coat protein of cucumber mosaic virus; exemption from the requirement of a tolerance.

    Science.gov (United States)

    2010-07-01

    ... 40 Protection of Environment 23 2010-07-01 2010-07-01 false Coat protein of cucumber mosaic virus...-INCORPORATED PROTECTANTS Tolerances and Tolerance Exemptions § 174.516 Coat protein of cucumber mosaic virus; exemption from the requirement of a tolerance. Residues of Coat Protein of Cucumber Mosaic Virus are...

  15. Comparative analysis of RNA silencing suppression activities between viral suppressors and an endogenous plant RNA-dependent RNA polymerase.

    Science.gov (United States)

    Yoon, Ju-Yeon; Han, Kyoung-Sik; Park, Han-Yong; Choi, Seung-Kook

    2012-06-01

    RNA silencing is an evolutionarily conserved system that functions as an antiviral mechanism in eukaryotes, including higher plants. To counteract this, several plant viruses express silencing suppressors that inhibit RNA silencing in host plants. Here, we show that both 2b protein from peanut stunt virus (PSV) and a hairpin construct (designated hp-RDR6) that silences endogenous RNA-dependent RNA polymerase 6 (RDR6) strongly suppress RNA silencing. The Agrobacterium infiltration system was used to demonstrate that both PSV 2b and hp-RDR6 suppressed local RNA silencing as strongly as helper component (HC-Pro) from potato virus Y (PVY) and P19 from tomato bush stunt virus (TBSV). The 2b protein from PSV eliminated the small-interfering RNAs (siRNAs) associated with RNA silencing and prevented systemic silencing, similar to 2b protein from cucumber mosaic virus (CMV). On the other hand, hp-RDR6 suppressed RNA silencing by inhibiting the generation of secondary siRNAs. The small coat protein (SCP) of squash mosaic virus (SqMV) also displayed weak suppression activity of RNA silencing. Agrobacterium-mediated gene transfer was used to investigate whether viral silencing suppressors or hp-RDR6 enhanced accumulations of green fluorescence protein (GFP) and β-glucuronidase (GUS) as markers of expression in leaf tissues of Nicotina benthamiana. Expression of both GFP and GUS was significantly enhanced in the presence of PSV 2b or CMV 2b, compared to no suppression or the weak SqMV SCP suppressor. Co-expression with hp-RDR6 also significantly increased the expression of GFP and GUS to levels similar to those induced by PVY HC-Pro and TBSV P19.

  16. Comparisons of dioxin levels of cucumber varieties and cultivation periods

    Energy Technology Data Exchange (ETDEWEB)

    Eun, H.; Watanabe, E.; Ishii, Y.; Ueji, M. [National Inst. for Agro-Environmental Sciences, Tsukuba (Japan); Narita, I.; Nakamura, K. [Saitama Prefecture Agriculture and Forestry Research Center, Saitama (Japan)

    2004-09-15

    According to a 2001 survey on Daily Intake in Japan, the total dioxins intake of a person in Japan amounts to 1.68 pg-TEQ per kg of body weight/day on average. The sharing a percentage of agricultural crops was about 3%in Japanese TDI amounts. However, all cases collect samples from supermarkets to estimate TDI of dioxins, which make it difficult to understand under what environment, food samples were pretreated and cultivated. Especially, TDI values in agricultural crops are probably dependent on the collection situation. In the agricultural environment, some reports indicate that dioxins have accumulated in paddy and upland in Japan due to the past use of some types of agricultural chemicals, which contained dioxins as impurities. Furthermore, taking the atmospheric pathway, for example, dioxins in the ambient air are associated with particulate matter and fall to the ground, contaminating agricultural land. Thus, it has been emphasized that dioxin compounds have a possibility to have adverse effect on vegetables. However, there is little understanding related to this fact in the country and worldwide. Empirical studies conducted in Japan and abroad have reported low residual concentrations of dioxins in cucumbers (Cucumis sativus L.), a member of the gourd family. However, there have been extremely few instances of research involving overall comparisons of cultivation environments. Thus, we studied the persistence of dioxins in cucumbers of different varieties cultivated outdoors over varying cultivation periods, conducting thorough experiments to elucidate the actual conditions and mechanisms of dioxin contamination of cucumbers.

  17. [Thermal dissipation pathway in cucumber seedling leaves under hypoxia stress].

    Science.gov (United States)

    Jia, Yong-xi; Sun, Jin; Wang, Li-ping; Shu, Sheng; Guo, Shi-rong

    2011-03-01

    A water culture experiment was conducted to study the relationship between photosynthetic thermal dissipation and xanthophyll cycle in cucumber seedling leaves under hypoxia stress (the dissolved oxygen concentration in nutrient solution was 0.9-1.1 mg x L(-1)). Under the hypoxia stress, there was a significant decrease in the quantum yield of PS II photochemistry rate (phi(PS II)), net photosynthetic rate (Pn) under saturation light intensity, quanta yield (AQY), and maximal photochemical efficiency (Fv/Fm), suggesting that the photoinhibition of the seedling leaves was induced. Meanwhile, the thermal dissipation (NPQ) and the allocation of dissipation energy (D) by antenna increased, but the photochemical quenching apparent (q(p)) decreased, suggesting the enhancement of thermal dissipation in cucumber leaves under hypoxia stress. A positive correlation was observed between NPQ and xanthophyll de-epoxidation state (DEPS), and both of them were promoted by ascorbic acid (AsA) and inhibited by 1,4-dithiothreitol (DTT), suggesting that xanthophyll cycle was the major pathway of photosynthetic thermal dissipation in cucumber seedling leaves under hypoxia stress.

  18. Enantioselective degradation of metalaxyl in cucumber, cabbage, spinach and pakchoi.

    Science.gov (United States)

    Wang, Meiyun; Zhang, Qing; Cong, Lujing; Yin, Wei; Wang, Minghua

    2014-01-01

    The enantioselective degradation behaviors of the acylamino acid fungicide metalaxyl in vegetables (cucumber, cabbage, spinach and pakchoi) under field and greenhouse conditions were elucidated by reversed-phase high-performance liquid chromatography (HPLC). A cellulose tris (3-chloro-4-methyl phenyl carbamate) chiral column (Lux Cellulose-2) was used for the chiral separation of the enantiomers using acetonitrile-0.1% formic acid solution (40:60, v/v) as mobile phase at a flow rate of 1.0 mL min(-1). The two enantiomers could be completely separated with a resolution (Rs) of 5.2. The linearity range, matrix effect, precision and recovery were evaluated. The method was successfully applied for the enantioselective analysis of metalaxyl in cucumber, cabbage, spinach and pakchoi under different conditions. The results showed that R-enantiomer dissipated faster than S-enantiomer in cucumber of greenhouse. Inversely, a preferential degradation of S-form was found in spinach and pakchoi under field and greenhouse conditions. No stereoselective degradation in cabbage was observed. These results can be applied for evaluating the environmental risk and food safety. Copyright © 2013 Elsevier Ltd. All rights reserved.

  19. Transcriptome profile analysis of floral sex determination in cucumber.

    Science.gov (United States)

    Wu, Tao; Qin, Zhiwei; Zhou, Xiuyan; Feng, Zhuo; Du, Yalin

    2010-07-15

    Cucumber has been widely studied as a model for floral sex determination. In this investigation, we performed genome-wide transcriptional profiling of apical tissue of a gynoecious mutant (Csg-G) and the monoecious wild-type (Csg-M) of cucumber in an attempt to isolate genes involved in sex determination, using the Solexa technology. The profiling analysis revealed numerous changes in gene expression attributable to the mutation, which resulted in the down-regulation of 600 genes and the up-regulation of 143 genes. The Solexa data were confirmed by reverse transcription polymerase chain reaction (RT-PCR) and real-time quantitative RT-PCR (qRT-PCR). Gene ontology (GO) analysis revealed that the differentially expressed genes were mainly involved in biogenesis, transport and organization of cellular component, macromolecular and cellular biosynthesis, localization, establishment of localization, translation and other processes. Furthermore, the expression of some of these genes depended upon the tissue and the developmental stage of the flowers of gynoecious mutant. The results of this study suggest two important concepts, which govern sex determination in cucumber. First, the differential expression of genes involved in plant hormone signaling pathways, such as ACS, Asr1, CsIAA2, CS-AUX1 and TLP, indicate that phytohormones and their crosstalk might play a critical role in the sex determination. Second, the regulation of some transcription factors, including EREBP-9, may also be involved in this developmental process.

  20. Light inhibits gravity-regulated peg formation and asymmetric mRNA accumulation of auxin-inducible CsIAA1 in the cortex of the transition zone in cucumber seedlings

    Science.gov (United States)

    Fujii, Nobuharu; Saito, Yuko; Miyazawa, Yutaka; Takahashi, Hideyuki

    When cucumber seedlings are grown horizontally, a specialized protuberance, termed the peg, develops on the lower side of the transition zone between the hypocotyl and the root. Gravimorphogenesis regulates the lateral positioning of the peg in the transition zone and it has been suggested that auxin plays an important role in peg formation in cucumber seedlings. Here, we found that light inhibited auxin-regulated peg formation. In the transition zone of horizontally positioned cucumber seedlings grown in the dark, we detected an asymmetric accumulation of mRNA from the auxin-inducible gene CsIAA1 in the epidermis and cortex. However, in seedlings grown under illumination, this asymmetry was greatly reduced. In dark- and light-grown seedlings, application of 10 -3 M indole-3-acetic acid induced peg formation on both the lower and upper sides of the transition zone. These results suggest that light inhibits peg formation via modification of auxin distribution and/or levels in the transition zone of cucumber seedlings.

  1. Identification a coat protein region of cucumber mosaic virus (CMV) essential for long-distance movement in cucumber.

    Science.gov (United States)

    Salánki, Katalin; Kiss, László; Gellért, Akos; Balázs, Ervin

    2011-12-01

    To characterise the long-distance movement determinant of cucumoviral coat proteins (CPs), five mutants were engineered into the CMV CP bearing the corresponding tomato aspermy virus (TAV) loops exposed on the surface of the virion. Both viruses can move long-distance in Nicotiana clevelandii, but only CMV can move long-distance in cucumber. Investigation of the CMV chimeras identified three amino acids of the βB-βC loop that were essential for the CMV long-distance movement in cucumber. Introducing these mutations into the TAV CP was not sufficient for long-distance movement, indicating that this is not the sole region causing long-distance movement deficiency.

  2. Effect of pesticide mixture on value of fresh, fermented and pickles cucumbers

    Directory of Open Access Journals (Sweden)

    Krystyna WElkner

    2013-12-01

    Full Text Available In years 1998-1999 effects of fungicides (azoxystrobin and copper hydroxide, insecticides (etafenproks and pirimicarb and their mixtures on chemical composition and organoleptic quality of fresh, fermented and pickled cucumbers were studied_ To analyses fruits were taken after 7 and 12 days from treatment. Fresh cucumber fruits after 7 days from treatment with investigated pesticides contained less carbohydrates and ascorbic acids and higher level of nitrates in compare to untreated fruits (control. After 12 days from treatment the differences between treated and untreated fruits dissapeared. Cucumber fruits harvested 7 and 12 days after treatment were processed separately. Quality evaluation of fermented and pickled cucumbers was carried out 4 months after processing. In most of cucumber fruits (7 days after treatment with pesticides treated with pesticides empty cavities were found, and not in control (untreated. Number of cavities was highest in fresh and pickled cucumbers treated with mixture of fungicide and insecticide. In case of fermented cucumbers highest number of empty cavities occurred in fruits treated with fungicide azoxystrobin. Cucumber fruits taken to fermentation process 7 days after day of treatment had darker green colour, lowered haIdness, and larger empty cavities than untreated fruits. In fruits harvested 12 days after pesticides application such differencess were not observed.

  3. Inheritance of Beta-Carotene-Associated Flesh Color in Cucumber (Cucumis Sativus L.) Fruit

    Science.gov (United States)

    The nutritional value of cucumber (Cucumis sativus L.) can be improved by the introgression of ß-carotene (i.e., provitamin A and/or orange flesh) genes from “Xishuangbanna gourd” (XIS; Cucumis sativus var. xishuangbannanesis Qi et Yuan) into U.S. pickling cucumber. However, the genetics of ß-carote...

  4. On-Line Hyperspectral Transmittance Imaging for Internal Defect Detection of Pickling Cucumbers

    Science.gov (United States)

    Hyperspectral imaging technique under transmittance mode was investigated for detection of internal defect in pickling cucumbers such as carpel suture separation or hollow cucumbers caused by mechanical stress. A prototype of on-line hyperspectral transmittance imaging system was developed for real...

  5. Engineering Research on Quality Detection of Pickling Cucumbers: 2009 Progress Report

    Science.gov (United States)

    This report briefly summarizes the three studies performed in 2009 on cucumber defect detection. Hyperspectral imaging transmittance mode has demonstrated great potential for online sorting and grading of cucumbers and pickles. However, the technique is still limited by its speed in acquiring and pr...

  6. QTL mapping of powdery mildew resistance in WI 2757 cucumber (Cucumis sativus L)

    Science.gov (United States)

    Powdery mildew is a serious fungal disease of cucumber and other cucurbot crops in the US and many other parts of the world. Resistant cultivars have been deployed in production for a long time, but the genetic mechanisms of powdery mildew resistance in cucumber are not well understood. In a three-y...

  7. Reduction of Salmonella populations on cucumber fruit by application of lytic bacteriophages

    Science.gov (United States)

    Background: Foodborne illness outbreaks of Salmonella enterica associated with consumption of cucumbers (Cucumis sativus) in the U.S. in 2014 and 2015 sickened over 1000 people and caused 5 deaths. Whole and fresh-cut cucumbers are susceptible to Salmonella contamination during growing and harvestin...

  8. Determination of germination quality of cucumber (Cucumis sativus) seed by LED-induced hyperspectral reflectance imaging

    Science.gov (United States)

    Purpose: We developed a viability evaluation method for cucumber (Cucumis sativus) seed using hyperspectral reflectance imaging. Methods: Reflectance spectra of cucumber seeds in the 400 to 1000 nm range were collected from hyperspectral reflectance images obtained using blue, green, and red LED ill...

  9. Transcriptomic and QTL analysis suggest candidate fruit shape factors in cucumber (Cucumis sativus)

    Science.gov (United States)

    Fruit size and shape are important determinants of market class and value in cucumber; however, underlying mechanisms regulating size and shape have not been identified. To gain insight into possible factors regulating cucumber fruit growth, we used a combined QTL and transcriptome approach to exami...

  10. Pentatricopeptide repeat 336 as the candidate gene for paternal sorting of mitochondria (Psm) in cucumber

    Science.gov (United States)

    Cucumber (Cucumis sativus L.) is a useful plant to study organellar-nuclear interactions because its three genomes show differential transmission: bi-parental nuclear, maternal chloroplast and paternal mitochondrial (mt). The mt DNA of cucumber is relatively large due in part to accumulation of rep...

  11. Comparative mapping of ZYMV resistances in cucumber (Cucumis sativus L.) and melon (Cucumis melo L.).

    Science.gov (United States)

    Park, Y; Katzir, N; Brotman, Y; King, J; Bertrand, F; Havey, M

    2004-08-01

    Zucchini yellow mosaic virus (ZYMV) routinely causes significant losses in cucumber ( Cucumis sativus L.) and melon ( Cucumis melo L.). ZYMV resistances from the cucumber population 'TMG1' and the melon plant introduction (PI) 414723 show different modes of inheritance and their genetic relationships are unknown. We used molecular markers tightly linked to ZYMV resistances from cucumber and melon for comparative mapping. A 5-kb genomic region (YCZ-5) cosegregating with the zym locus of cucumber was cloned and sequenced to reveal single nucleotide polymorphisms and indels distinguishing alleles from ZYMV-resistant (TMG1) and susceptible (Straight 8) cucumbers. A low-copy region of the YCZ-5 clone was hybridized to bacterial artificial chromosome (BAC) clones of melon and a 180-kb contig assembled. One end of this melon contig was mapped in cucumber and cosegregated with ZYMV resistance, demonstrating that physically linked regions in melon show genetic linkage in cucumber. However the YCZ-5 region segregated independently of ZYMV resistance loci in two melon families. These results establish that these sources of ZYMV resistances from cucumber TMG1 and melon PI414723 are likely non-syntenic.

  12. Thick root of cucumber: other susceptible plants and the effect of pH

    NARCIS (Netherlands)

    Gaag, van der D.J.; Paternotte, P.; Hamelink, R.

    2002-01-01

    Thick root is a relatively new disorder of cucumber grown in artificial substrates. Plants of cucumber, tomato, sweet pepper, lupin, anthurium, Cucurbita ficifolia, C. maxima and two lines from crosses between C. maxima and C. moschata were grown in thick root disease (TRD)-infested nutrient solutio

  13. Identification of five sea cucumber species through PCR-RFLP analysis

    Science.gov (United States)

    Lv, Yingchun; Zheng, Rong; Zuo, Tao; Wang, Yuming; Li, Zhaojie; Xue, Yong; Xue, Changhu; Tang, Qingjuan

    2014-10-01

    Sea cucumbers are traditional marine food and Chinese medicine in Asia. The rapid expansion of sea cucumber market has resulted in various problems, such as commercial fraud and mislabeling. Conventionally, sea cucumber species could be distinguished by their morphological and anatomical characteristics; however, their identification becomes difficult when they are processed. The aim of this study was to develop a new convenient method of identifying and distinguishing sea cucumber species. Polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) analysis of mitochondrial cytochrome oxidase I gene ( COI) was used to identifing five sea cucumber species ( Apostichopus japonicus, Cucumaria frondosa, Thelenota ananas, Parastichopus californicus and Actinopyga lecanora). A 692 bp fragment of COI was searched for BamHI, KpnI, PstI, XbaI and Eco31I restriction sites with DNAMAN 6.0, which were then used to PCR-RFLP analysis. These five sea cucumber species can be discriminated from mixed sea cucumbers. The developed PCR-RFLP assay will facilitate the identification of sea cucumbers, making their source tracing and quality controlling feasible.

  14. Multispectral fluorescence imaging technique for discrimination of cucumber (Cucumis Sativus) seed viability

    Science.gov (United States)

    In this study, we developed a nondestructive method for discriminating viable cucumber (Cucumis sativus) seeds based on hyperspectral fluorescence imaging. The fluorescence spectra of cucumber seeds in the 420–700 nm range were extracted from hyperspectral fluorescence images obtained using 365 nm u...

  15. A truncated F-box protein confers the dwarfism in cucumber

    Science.gov (United States)

    Dwarfism is an important plant architecture trait for cucumber breeding. In the present study, we identified a dwarf mutant 406M in cucumber which showed a shorter internode length as compared with its wild type. In a BC1F2 population from the cross of 406M with its wild type parental line 406, the ...

  16. First complete genome sequence of an emerging cucumber green mottle mosaic virus isolate in North America

    Science.gov (United States)

    The complete genome sequence (6,423 nt) of an emerging Cucumber green mottle mosaic virus (CGMMV) isolate on cucumber in North America was determined through deep sequencing of sRNA and rapid amplification of cDNA ends. It shares 99% nucleotide sequence identity to the Asian genotype, but only 90% t...

  17. Metabolic footprinting of Lactobacillus buchneri strain LA1147 during anaerobic spoilage of fermented cucumbers

    Science.gov (United States)

    Lactobacillus buchneri has recently been associated with anaerobic spoilage of fermented cucumbers due to its ability to metabolize lactic acid into acetic acid and 1,2-propanediol. However, we have limited knowledge of other chemical components in fermented cucumber that may be related to spoilage ...

  18. Fine genetic mapping of target leaf spot resistance gene cca-3 in cucumber, Cucumis sativus L

    Science.gov (United States)

    The target leaf spot (TLS) is a very important fungal disease in cucumber. In this study, we conducted fine genetic mapping of a recessively inherited resistance gene, cca-2 against TLS with 1,083 F2 plants derived from the resistant cucumber inbred line D31 and the susceptible line D5. Initial mapp...

  19. [Effects of wheat root exudates on cucumber growth and soil fungal community structure].

    Science.gov (United States)

    Wu, Feng-Zhi; Li, Min; Cao, Peng; Ma, Ya-Fei; Wang, Li-Li

    2014-10-01

    With wheat as the donor plant and cucumber as the receptor plant, this study investigated the effects of root exudates from wheat cultivars with different allelopathic potentials (positive or negative) and companion cropping with wheat on soil fungal community structure by PCR-DGGE method and cucumber growth. Results showed that the wheat root exudates with positive allelopathic potential increased height and stem diameter of cucumber seedlings significantly, compared to the control seedlings (W) after 6 days and 12 days treatment, respectively. Also, wheat root exudates with both positive and negative allelopathic potential increased the seedling height of cucumber significantly after 18 days treatment. The wheat root exudates with different allelopathic potentials decreased the band number, Shannon and evenness indices of soil fungal community significantly in cucumber seedling rhizosphere, and those in the soil with the control seedlings (W) were also significantly higher than that in the control soil without seedlings (Wn) after 6 days treatment. The band number, Shannon and evenness indices in all the treatments were significantly higher than those in the control soil without seedlings (Wn) after 18 days treatment. Companion cropping with negative allelopathic potential wheat decreased the Shannon and evenness indices of soil fungi community significantly in the cucumber seedling rhizosphere, suggesting the wheat root exudates and companion cropping with wheat changed soil fungal community structure in the cucumber seedling rhizosphere. The results of DGGE map and the principal component analysis showed that companion cropping with wheat cultivars with different allelopathic potentials changed soil fungal community structure in cucumber seedling rhizosphere.

  20. Preparation of a Lactobacillus plantarum starter culture for cucumber fermentations that can meet kosher guidelines

    Science.gov (United States)

    A method is described for growth of a Lactobacillus plantarum starter culture in jars of commercially available pasteurized fresh-pack kosher dill cucumbers so that jars can be used to inoculate commercial scale cucumber fermentation tanks. A procedure is also described to transfer lactic acid bacte...

  1. Targeting tumor suppressor genes for cancer therapy.

    Science.gov (United States)

    Liu, Yunhua; Hu, Xiaoxiao; Han, Cecil; Wang, Liana; Zhang, Xinna; He, Xiaoming; Lu, Xiongbin

    2015-12-01

    Cancer drugs are broadly classified into two categories: cytotoxic chemotherapies and targeted therapies that specifically modulate the activity of one or more proteins involved in cancer. Major advances have been achieved in targeted cancer therapies in the past few decades, which is ascribed to the increasing understanding of molecular mechanisms for cancer initiation and progression. Consequently, monoclonal antibodies and small molecules have been developed to interfere with a specific molecular oncogenic target. Targeting gain-of-function mutations, in general, has been productive. However, it has been a major challenge to use standard pharmacologic approaches to target loss-of-function mutations of tumor suppressor genes. Novel approaches, including synthetic lethality and collateral vulnerability screens, are now being developed to target gene defects in p53, PTEN, and BRCA1/2. Here, we review and summarize the recent findings in cancer genomics, drug development, and molecular cancer biology, which show promise in targeting tumor suppressors in cancer therapeutics.

  2. The interaction between Turnip crinkle virus p38 and Cucumber mosaic virus 2b and its critical domains.

    Science.gov (United States)

    Li, Yanan; Zhang, Jing; Zhao, Feifei; Ren, Han; Zhu, Lin; Xi, Dehui; Lin, Honghui

    2016-08-15

    Cross protection is a common phenomenon among closely related strain viruses in co-infected plants. However, unrelated viruses, Turnip crinkle virus (TCV) and Cucumber mosaic virus (CMV), also show an antagonistic effect in co-infected Arabidopsis plants. In many cases, viral suppressors of RNA silencing (VSRs) have important roles in the interactions between viruses in mixed infections. CMV 2b and TCV p38 are multifunctional proteins and both of them are well characterized VSRs and have important roles in operation synergistic interactions with other viruses. Here, we demonstrated antagonistic effects of TCV toward CMV and showed that RNA silencing-mediated resistance protein, RCY1 and TCV-interacting protein (TIP) of Arabidopsis plants did not affect this antagonism effect. We further showed that TCV p38 and CMV 2b could interact with each other in vivo but not in vitro. Further mutational analysis showed that C-terminal of 2b and middle domains of p38 had more important roles in the interaction between the two viruses.

  3. Characterization of an amber suppressor in Pneumococcus.

    Science.gov (United States)

    Gasc, A M; Vacher, J; Buckingham, R; Sicard, A M

    1979-01-01

    Partial revertant has been isolated, with resistance to aminopterin intermediate between wild type and mutant. This phenotype is the result of a mutation at a gene unlinked to the amiA locus. This suppressor mutation (su+) has no phenotypic characteristics by itself except a slow growth. 9 amiA mutants (belonging to 6 sites) are affected by su+ out of the 30 investigated mutants (i.e. 22 sites). The efficiency of suppression is site dependent. Two sites out of 14 mutants belonging to the thymidylate synthetase gene are suppressible. Thymidylate synthetase activity is partially restored by su+. Optochin mutants can also be suppressed. Thus su+ is not gene specific but site specific. Moreover when the str-41 allele conferring resistance to streptomycin is introduced by transformation, the suppression effect is restricted. All these properties are characteristic of an informational suppressor. The t-RNA extracted from the suppressor strain su+ but not the wild type restored the synthesis of coat protein coded by RNA from an amber mutant of bacteriophage f2. Attempts to detect ochre suppression activity gave negative results. It is suggested that the su+ gene is amber specific. Thus su+ can provide insight into the nature of suppressible mutations which should be point mutations. Both low efficiency and high efficiency mutants are affected by su+; this is additional evidence that both categories contain point mutations.

  4. Expression patterns of genes encoding plasma membrane aquaporins during fruit development in cucumber (Cucumis sativus L.).

    Science.gov (United States)

    Shi, Jin; Wang, Jinfang; Li, Ren; Li, Dianbo; Xu, Fengfeng; Sun, Qianqian; Zhao, Bin; Mao, Ai-Jun; Guo, Yang-Dong

    2015-11-01

    Aquaporins are membrane channels precisely regulating water movement through cell membranes in most living organisms. Despite the advances in the physiology of fruit development, their participation during fruit development in cucumber still barely understood. In this paper, the expressions of 12 genes encoding plasma membrane intrinsic proteins (PIPs) were analyzed during cucumber fruit development in our work. Based on the homology search with known PIPs from rice, Arabidopsis and strawberry, 12 cucumber PIP genes subfamily members were identified. Cellular localization assays indicated that CsPIPs were localized in the plasma membrane. The qRT-PCR analysis of CsPIPs showed that 12 CsPIPs were differentially expressed during fruit development. These results suggest that 12 genes encoding plasma membrane intrinsic proteins (CsPIPs) play very important roles in cucumber life cycle and the data generated will be helpful in understanding their precise roles during fruit development in cucumber.

  5. Induction and mechanism of cucumber resistance to anthracnose induced by Pieris rapae extract

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    Pieris rapae extract was sprayed on the surface of cucumber leaf to determine the induction of resistance to anthracnose.The enzyme activities of peroxidase (POD) and polyphenoloxidase (PPO) were detected on cucumber leaves after P.rapae extract induction and pathogen challenge.The results showed that the disease index of cucumber anthracnose was significantly decreased after the cucumber was induced with the P.rapae extract at a concentration of 5.0 mg·mL-1.The POD and PPO activities in foliar-applied P.rapae extract without pathogen inoculation (PETO) or with pathogen inoculation (PETI) were relatively higher than those with no-P.rapae extract treatment and without pathogen inoculation (CONO) or with pathogen inoculation (CONI),respectively.The results suggested that the increased levels of POD and PPO activities in PETO and PETI play an important role in the induction of resistance to cucumber anthracnose.

  6. Economics of Peppers and Salad Cucumbers Production on an Open Land and in a Protected Space

    Directory of Open Access Journals (Sweden)

    Silvio Pozderec

    2014-02-01

    Full Text Available The research is based on the economic analysis of growing peppers (Capsicum annum L. and salad cucumbers (Cucumis sativus L. in an open land and in a protected space. For this purpose the simulation models were developed for the growing of the peppers and salad cucumbers that were based on the technological-economic input data for two growing systems, in the open and in the protected space. The results of the economic analysis show that the growing of peppers and salad cucumbers in the protected space is more profi table than growing them in the open land. The growing of salad cucumbers in the protected space has proven to be more reasonable than growing peppers, as the coefficient of economics (Ce of growing salad cucumbers reached the value Ce = 1.4, while the value in growing peppers was Ce = 1.1. This was also confirmed with two scenarios that were analysed using the sensitivity analysis.

  7. Economics of Peppers and Salad Cucumbers Production on an Open Land and in a Protected Space

    Directory of Open Access Journals (Sweden)

    Silvio Pozderec

    2010-09-01

    Full Text Available The research is based on the economic analysis of growing peppers (Capsicum annum L. and salad cucumbers (Cucumis sativus L. in an open land and in a protected space. For this purpose the simulation models were developed for the growing of the peppers and salad cucumbers that were based on the technological-economic input data for two growing systems, in the open and in the protected space. The results of the economic analysis show that the growing of peppers and salad cucumbers in the protected space is more profi table than growing them in the open land. The growing of salad cucumbers in the protected space has proven to be more reasonable than growing peppers, as the coefficient of economics (Ce of growing salad cucumbers reached the value Ce = 1.4, while the value in growing peppers was Ce = 1.1. This was also confirmed with two scenarios that were analysed using the sensitivity analysis.

  8. Lactobacilli and tartrazine as causative agents of red-color spoilage in cucumber pickle products.

    Science.gov (United States)

    Pérez-Díaz, I M; Kelling, R E; Hale, S; Breidt, F; McFeeters, R F

    2007-09-01

    The cucumber pickling industry has sporadically experienced spoilage outbreaks in pickled cucumber products characterized by development of red color on the surface of the fruits. Lactobacillus casei and Lactobacillus paracasei were isolated from 2 outbreaks of this spoilage that occurred about 15 y apart during the last 3 decades. Both organisms were shown to produce this spoilage when inoculated into pickled cucumbers while concomitantly degrading the azo dye tartrazine (FD&C yellow nr 5). This food dye is used as a yellow coloring in the brine cover solutions of commercial pickled cucumber products. The red color does not occur in the absence of tartrazine, nor when turmeric is used as a yellow coloring in the pickles. Addition of sodium benzoate to the brine cover solutions of a pickled cucumber product, more specifically hamburger dill pickles, prevented growth of these lactic acid bacteria and the development of the red spoilage.

  9. LATS1 tumor suppressor is a novel actin-binding protein and negative regulator of actin polymerization

    Institute of Scientific and Technical Information of China (English)

    Stacy Visser-Grieve; Zhonghua Zhou; Yi-Min She; He Huang; Terry D Cyr; Tian Xu; Xiaolong Yang

    2011-01-01

    Dear Editor,The LATS tumor suppressor,conserved from Drosophila (dlats) to humans (LATS1,LATS2),plays a vital role in maintaining cellular homeostasis in humans since loss of either LATS1 or LATS2 leads to the development of numerous cancer types such as breast cancer and leukemia [1].Apart from its roles as a Ser/Thr kinase within the emerging Hippo pathway regulating cell proliferation and apoptosis,ultimately leading to the control of organ size and tumorigenesis [2],LATS is also implicated in a broad range of functions including regulation of genetic stability,transcription,and protein stability [1 ].Recently,tumor suppressors have also been shown to affect the later stages of tumorigenesis,including metastasis.Among this group of metastasis regulators are genes that can directly affect actin dynamics by binding to F-actin,such as the tumor suppressors p53 [3],NF2 [4] and APC [5].

  10. Detection of mechanical injury on pickling cucumbers using near-infrared hyperspectral imaging

    Science.gov (United States)

    Ariana, D.; Lu, R.; Guyer, D.

    2005-11-01

    Automated detection of defects on freshly harvested pickling cucumbers will help the pickle industry provide higher quality pickle products and reduce potential economic losses. Research was conducted on using a hyperspectral imaging system for detecting defects on pickling cucumbers caused by mechanical stress. A near-infrared hyperspectral imaging system was used to capture both spatial and spectral information from cucumbers in the spectral region of 900 - 1700 nm. The system consisted of an imaging spectrograph attached to an InGaAs camera with line-light fiber bundles as an illumination source. Cucumber samples were subjected to two forms of mechanical loading, dropping and rolling, to simulate stress caused by mechanical harvesting. Hyperspectral images were acquired from the cucumbers over time periods of 0, 1, 2, 3, and 6 days after mechanical stress. Hyperspectral image processing methods, including principal component analysis and wavelength selection, were developed to separate normal and mechanically injured cucumbers. Results showed that reflectance from normal or non-bruised cucumbers was consistently higher than that from bruised cucumbers. The spectral region between 950 and 1350 nm was found to be most effective for bruise detection. The hyperspectral imaging system detected all mechanically injured cucumbers immediately after they were bruised. The overall detection accuracy was 97% within two hours of bruising and it was lower as time progressed. Lower detection accuracies for the prolonged times after bruising were attributed to the self- healing of the bruised tissue after mechanical injury. This research demonstrated that hyperspectral imaging is useful for detecting mechanical injury on pickling cucumbers.

  11. Heterogeneity Analysis of Cucumber Canopy in the Solar Greenhouse

    Institute of Scientific and Technical Information of China (English)

    QIAN Ting-ting; LU Sheng-lian; ZHAO Chun-jiang; GUO Xin-yu; WEN Wei-liang; DU jian-jun

    2014-01-01

    Detailed analysis of canopy structural heterogeneity is an essential step in conducting parameters for a canopy structural model. This paper aims to analyze the structural heterogeneity of a cucumber (Cucumis sativus L.) canopy by means of analyzing leaf distribution in a greenhouse environment with natural sunlight and also to assess the effect of structural canopy heterogeneity on light interception and photosynthesis. Two experiments and four measurements were carried out in autumn 2011 and spring 2012. A static virtual three-dimensional (3D) canopy structure was reconstructed using a 3D digitizing method. The diurnal variation of photosynthesis rate was measured using CIRAS-2 photosynthesis system. The results showed that, leaf azimuth as tested with the Rayleigh-test was homogeneous at vine tip over stage but turned heterogeneous at fruit harvest stage. After eliminating the inlfuence of the environment on the azimuth using the von Mises-Fisher method, the angle between two successive leaves was 144°;at the same time, a rule for the azimuth distribution in the canopy was established, stating that the azimuth distribution in cucumber followed a law which was positive spin and anti-spin. Leaf elevation angle of south-oriented leaves was on average 13.8° higher than that of north-oriented leaves. The horizontal distribution of light interception and photosynthesis differed signiifcantly between differently oriented leaves. East-and west-oriented leaves exhibited the highest photosynthetic rate. In conclusion, detailed analysis of canopy structural heterogeneity in this study indicated that leaf azimuth and elevation angle were heterogeneous in cucumber canopy and they should be explicitly described as they have a great impact both on light distribution and photosynthesis.

  12. Nutritional components of the sea cucumber Holothuria scabra

    Directory of Open Access Journals (Sweden)

    Morakot Sroyraya

    2017-03-01

    Full Text Available Background: Holothuria scabrais one of the most commercially important species found in the Pacific region. The sea cucumber extracts have been widely reported to have beneficial health effects.The aim of this study was to determine the nutritional compositions of H. scabra, and compare its important nutritional contents with that of other species.Methods:The sea cucumbers were dissected, sliced into small pieces,and then freeze-dried. The nutritional compositions, including proximate composition, amino acids, fatty acids,collagen, GABA, Vitamin A, C, and E of the whole body and body wall of H. scabra,were analyzed.Results:H. scabra contained a high quantity of protein (22.50% in whole body and 55.18% in body wall and very low lipids (1.55% in whole body and 1.02% in body wall. The three most abundant amino acids found in both the whole body and body wall were glycine, glutamic acid, and proline. The main fatty acids found in the whole body were stearic acid and nervonic acid, and in the body wall were arachidonic acid and stearic acid. The whole body and body wall also contained high levels of essential amino acids, essential fatty acids, and collagen, in addition to moderate amounts of vitamin E and low amounts of GABA and vitamin C.Conclusions:The sea cucumber, H. scabra, contained high quantity of protein and very low lipid. It containedhigh essential amino acids, essential fatty acids, nervonic and arachidonic acids, and collagen, which also contained GABA, vitamin C, and vitamin E.

  13. Myeloid suppressor cells in cancer and autoimmunity.

    Science.gov (United States)

    Sica, Antonio; Massarotti, Marco

    2017-07-17

    A bottleneck for immunotherapy of cancer is the immunosuppressive microenvironment in which the tumor cells proliferate. Cancers harness the immune regulatory mechanism that prevents autoimmunity from evading immunosurveillance and promoting immune destruction. Regulatory T cells, myeloid suppressor cells, inhibitory cytokines and immune checkpoint receptors are the major components of the immune system acting in concert with cancer cells and causing the subversion of anti-tumor immunity. This redundant immunosuppressive network poses an impediment to efficacious immunotherapy by facilitating tumor progression. Tumor-associated myeloid cells comprise heterogeneous populations acting systemically (myeloid-derived suppressor cells/MDSCs) and/or locally in the tumor microenvironment (MDSCs and tumor-associated macrophages/TAMs). Both populations promote cancer cell proliferation and survival, angiogenesis and lymphangiogenesis and elicit immunosuppression through different pathways, including the expression of immunosuppressive cytokines and checkpoint inhibitors. Several evidences have demonstrated that myeloid cells can express different functional programs in response to different microenvironmental signals, a property defined as functional plasticity. The opposed extremes of this functional flexibility are generally represented by the classical macrophage activation, which identifies inflammatory and cytotoxic M1 polarized macrophages, and the alternative state of macrophage activation, which identifies M2 polarized anti-inflammatory and immunosuppressive macrophages. Functional skewing of myeloid cells occurs in vivo under physiological and pathological conditions, including cancer and autoimmunity. Here we discuss how myeloid suppressor cells can on one hand support tumor growth and, on the other, limit autoimmune responses, indicating that their therapeutic reprogramming can generate opportunities in relieving immunosuppression in the tumor microenvironment or

  14. Phosphorus, Potassium and Nitrate Contents in Fruit of Pickling Cucumbers Grown in a High Tunnel

    Directory of Open Access Journals (Sweden)

    Gabriela NEAȚĂ

    2016-12-01

    Full Text Available Pickling cucumbers are highly important both for fresh consumption and for canning industry. This study aimed to compare differences in yield and quality of eight pickling cucumber cultivars, including ‘Cor 12004’, ‘IGG 2010’, ‘IGG 2020’, ‘SM 5322’, ‘SM 5323’, ‘Zayin 201’, ‘Zayin 175201’ and ‘Trilogy’. The cucumber cultivars were laid out in a high tunnel crop and evaluated for vegetative traits (i.e. vine length, nodes per vine and branches per vine, yield attributes (i.e. fruits per main stem, average weight of fruit and fruits weight per plant and fruits quality components (nitrate, phosphate and potassium mg kg-1. The results showed significant differences (P12 cm, revealed a declining value with increase in the cucumber length. The study findings suggest that irrespective of the cultivar, the amount of nitrate was higher in shorter cucumbers (6-9 cm length although all recorded values (between 192.7 and 364.3 mg kg-1 fresh matter being under maximum accepted limit concentrations. The amount of phosphate was higher in medium to long cucumbers, while the amount of potassium was higher in shorter cucumbers.

  15. Study on Relationship Between Cucumber Germplasm and Propa-mocarb Residue Using Subjective Rating Technique

    Institute of Scientific and Technical Information of China (English)

    Wu Peng; Qin Zhi-wei; Zhou Xiu-yan; Wu Tao; Xin Ming; Guo Qian-qian

    2014-01-01

    Propamocarb (PM) residue in cucumber (Cucumis sativus L.) receives little attention. As is well known to all, high PM residue of cucumber could lead to increase in the violation rates of maximum residue limits and ultimately cause harm to human health. Knowledge of PM residue could help cucumber breeders in developing cultivars with low PM residue and improving cucumber quality. In this study, 32 representative cucumber accessions (26 breeding lines and six cultivars) from different regions of China were evaluated for their PM residue in fruit and leaf to provide meaning to the subjective rating, which was highly correlated with PM residual content of fruit (r=0.97) and leaf (r=0.94). In addition, PM residual content of North China ecotype was the highest and Pickling ecotype was the lowest in fruit and leaf of cucumber. The leaf had significantly higher (P<0.01) PM residual content than the fruit, and poor correlation between leaf and fruit was represented. This study verified PM residual relationship between fruit and leaf, and laid the foundation for further identification of germplasm resources and breeding of new varieties for low PM residue of cucumber.

  16. Ultraviolet-C Light Sanitization of English Cucumber (Cucumis sativus) Packaged in Polyethylene Film.

    Science.gov (United States)

    Tarek, Abdussamad R; Rasco, Barbara A; Sablani, Shyam S

    2016-06-01

    Food safety is becoming an increasing concern in the United States. This study investigated the effects of ultraviolet-C (UV-C) light as a postpackaging bactericidal treatment on the quality of English cucumber packaged in polyethylene (PE) film. Escherichia coli k-12 was used as a surrogate microbe. The microbial growth and physical properties of packaged cucumbers were analyzed during a 28-d storage period at 5 °C. Inoculating packaged cucumbers treated at 23 °C for 6 min with UV-C (560 mJ/cm(2) ) resulted in a 1.60 log CFU/g reduction. However, this treatment had no significant effect (P > 0.05) on the water vapor transmission rate or oxygen transmission rate of the PE film. Results show that UV-C light treatment delayed the loss of firmness and yellowing of English cucumber up to 28 d at 5 °C. In addition, UV-C light treatment extended the shelf life of treated cucumber 1 wk longer compared to untreated cucumbers. Electron microscopy images indicate that UV-C light treatment influences the morphology of the E. coli k-12 cells. Findings demonstrate that treating cucumbers with UV-C light following packaging in PE film can reduce bacterial populations significantly and delay quality loss. This technology may also be effective for other similarly packaged fresh fruits and vegetables.

  17. Large-Scale Transcriptome Analysis of Cucumber and Botrytis cinerea during Infection.

    Directory of Open Access Journals (Sweden)

    Weiwen Kong

    Full Text Available Cucumber gray mold caused by Botrytis cinerea is considered one of the most serious cucumber diseases. With the advent of Hi-seq technology, it is possible to study the plant-pathogen interaction at the transcriptome level. To the best of our knowledge, this is the first application of RNA-seq to identify cucumber and B. cinerea differentially expressed genes (DEGs before and after the plant-pathogen interaction. In total, 248,908,688 raw reads were generated; after removing low-quality reads and those containing adapter and poly-N, 238,341,648 clean reads remained to map the reference genome. There were 3,512 cucumber DEGs and 1,735 B. cinerea DEGs. GO enrichment and KEGG enrichment analysis were performed on these DEGs to study the interaction between cucumber and B. cinerea. To verify the reliability and accuracy of our transcriptome data, 5 cucumber DEGs and 5 B. cinerea DEGs were chosen for RT-PCR verification. This is the first systematic transcriptome analysis of components related to the B. cinerea-cucumber interaction. Functional genes and putative pathways identified herein will increase our understanding of the mechanism of the pathogen-host interaction.

  18. Transcriptome and Small RNAome Dynamics during a Resistant and Susceptible Interaction between Cucumber and Downy Mildew

    Directory of Open Access Journals (Sweden)

    Alyssa Burkhardt

    2016-03-01

    Full Text Available Cucumber ( L. downy mildew, caused by the obligate oomycete pathogen (Berk. and Curt. Rostov., is the primary factor limiting cucumber production. Although sources of resistance have been identified, such as plant introduction line PI 197088, the genes and processes involved in mediating resistance are still unknown. In the current study, we conducted a comprehensive transcriptome and small RNAome analysis of a resistant (PI 197088 and susceptible (‘Vlaspik’ cucumber during a time course of infection using Illumina sequencing. We identified significantly differentially expressed (DE genes within and between resistant and susceptible cucumber leaves over a time course of infection. Weighted gene correlation network analyses (WGCNA created coexpression modules containing genes with unique expression patterns between Vlaspik and PI 197088. Recurring data trends indicated that resistance to cucumber downy mildew is associated with earlier response to the pathogen, hormone signaling, and regulation of nutrient supply. Candidate resistance genes were identified from multiple transcriptome analyses and literature support. Additionally, parallel sequencing of small RNAs (sRNAs from cucumber and during the infection time course was used to identify and quantify novel and existing microRNA (miRNA in both species. Predicted miRNA targets of cucumber transcripts suggest a complex interconnectedness of gene expression regulation in this plant–pathogen system. This work bioinformatically uncovered gene expression patterns involved in the mediation of or response to resistance. Herein, we provide the foundation for future work to validate candidate resistance genes and miRNA-based regulation proposed in this study.

  19. Estimating Time of Weed Emergence in Cucumber (Cucumis sativus L.

    Directory of Open Access Journals (Sweden)

    Nihat Tursun

    2015-02-01

    Full Text Available Modelling is carried out for eleven major weeds in cucumber to develop estimated models for weed emergence time. Weed species were grouped according to their emergence patterns. Amaranthus retroflexus, Chenopodium album, Heliotropium europaeum, Polygonum aviculare and Solanum nigrum were early emerging, Convolvulus arvensis, Cyperus rotundus, Cynodon dactylon, Portulaca oleracea and Sorghum halepense were season long emerging Tribulus terrestris was the late emerging weed species. Different non-linear growth curves (Chapman-Richard, Weibull, logistic, Gompertz and cubic spline fitted to the data of cumulative percent emergence for the different species and years. Cubic spline seemed the best model for many species.

  20. Two triterpene glycosides from the sea cucumber Bohadschia marmorata Jaeger

    Institute of Scientific and Technical Information of China (English)

    Wei Hua Yuan; Yang Hua Yi; Ling Li; Bao Shu Liu; Hong Wei Zhang; Peng Sun

    2008-01-01

    Further studies on the sea cucumber Bohadschia marmorata Jaeger led to the isolation of a new holostan-type triterpene glycoside,Marmoroside C (1) together with a known triterpene glycoside (2).On the basis of spectroscopic analyses,including twodimensional NMR techniques,and chemical reactions,the structure of the new triterpene glycoside was elucidated as 3-0-[3-O-methyl-β-D-glucopyranosyl-(1→3)-13-D-glucopyranosyl-(1→4)-β-D-quinovopyranosyl-(1→2)-4-O-sodium-sulfato-β-D-xylo-pyranosyl]-25-acetoxy-22-oxo-9(11)-holostene-3β,12α,17α-triol.

  1. Susceptibility level of cucumber downy mildew (Pseudoperonospora cubensis to metalaxyl

    Directory of Open Access Journals (Sweden)

    Bagi Ferenc F.

    2009-01-01

    Full Text Available Level of susceptibility of Pseudoperonospora cubensis isolate from Ratkovo to metalaxyl in concentrations 50, 100, 200, 400 and 800 μg/ml was investigated. The trials were conducted on cotyledon and fully developed young leaves using cucumber cultivar Haroš. Reduced level of susceptibility was detected in metalaxyl concentrations of 50, 100 and 200 μg/ml because the intensity of sporulation in these treatments was on the same level as in control. Sporulation was also observed on developed leaves treated with metalaxyl in concentrations of 400 and 800 μg/ml.

  2. High sequence conservation among cucumber mosaic virus isolates from lily.

    Science.gov (United States)

    Chen, Y K; Derks, A F; Langeveld, S; Goldbach, R; Prins, M

    2001-08-01

    For classification of Cucumber mosaic virus (CMV) isolates from ornamental crops of different geographical areas, these were characterized by comparing the nucleotide sequences of RNAs 4 and the encoded coat proteins. Within the ornamental-infecting CMV viruses both subgroups were represented. CMV isolates of Alstroemeria and crocus were classified as subgroup II isolates, whereas 8 other isolates, from lily, gladiolus, amaranthus, larkspur, and lisianthus, were identified as subgroup I members. In general, nucleotide sequence comparisons correlated well with geographic distribution, with one notable exception: the analyzed nucleotide sequences of 5 lily isolates showed remarkably high homology despite different origins.

  3. Silicon facilitates manganese phytoextraction by cucumber (Cucumis sativus L.)

    OpenAIRE

    Dragišić-Maksimović, Jelena; Mojović, Miloš; Maksimović, Vuk

    2016-01-01

    The effect of excess nutrient levels of manganese (Mn, 50 and 100 mM) on the growth inhibition and the appearance of Mn-toxicity symptoms in the leaves was studied in cucumber plants (Cucumis sativus L. cv. Chinese long). Silicon (Si), when supplied as 1.5 mM silicic acid, clearly decreased symptoms of Mn-toxicity despite approximately the same total Mn content in the leaves. In treated plants, Si improves growth and biomass production compared with that of non-Si treated plants. Inert deposi...

  4. Suppressors of Recb Mutations in Salmonella Typhimurium

    OpenAIRE

    Benson, N. R.; Roth, J.

    1994-01-01

    Using a screen that directly assesses transductional proficiency, we have isolated suppressors of recB mutations in Salmonella typhimurium. The alleles of sbcB reported here are phenotypically distinct from those isolated in Escherichia coli in that they restore recombination proficiency (Rec(+)), resistance to ultraviolet light (UV(R)), and mitomycin C resistance (MC(R)) in the absence of an accompanying sbcCD mutation. In addition the sbcB alleles reported here are co-dominant to sbcB(+). W...

  5. Phosphorus, Potassium and Nitrate Contents in Fruit of Pickling Cucumbers Grown in a High Tunnel

    OpenAIRE

    2016-01-01

    Pickling cucumbers are highly important both for fresh consumption and for canning industry. This study aimed to compare differences in yield and quality of eight pickling cucumber cultivars, including ‘Cor 12004’, ‘IGG 2010’, ‘IGG 2020’, ‘SM 5322’, ‘SM 5323’, ‘Zayin 201’, ‘Zayin 175201’ and ‘Trilogy’. The cucumber cultivars were laid out in a high tunnel crop and evaluated for vegetative traits (i.e. vine length, nodes per vine and branches per vine), yield attributes (i.e. fruits per main s...

  6. Effects of Different Rootstocks on the Growth and Fruit Quality of Greenhouse Cucumber in Early Spring

    Institute of Scientific and Technical Information of China (English)

    LIU Bing; ZHANG Tianwei; ZHAO Jiayu; JIANG Xinmei

    2009-01-01

    Different pumpkin rootstocks were used to study the effects of different rootstocks on the growth and fruit quality of greenhouse cucumber in early spring. The results showed that the grafted cucumber could significantly improve the production, and different rootstock had a certain effect on the survival rate and fruit quality. Jinhuanghou and Fengyijiajiewang as rootstock had the highest survival rate, which were 79.0% and 70.7%, respectively. As rootstocks of greenhouse cucumber, Jinhuanghou, Lvzhoujuxing,Fengyi, Huofenghuang, and Dawei No.17 were better than others according to taste, and Heizinangua, Jinhuanghou, Fengyi,Huofenghuang, and Dawei No. 17 were better according to output.

  7. Investigation and Measurement of Pesticidal Residues; Benomil and Mancazeb in Cucumber Produced in Mazandaran.

    Directory of Open Access Journals (Sweden)

    B Shabankhani

    2006-01-01

    Full Text Available Introduction: Considering the importance and usefulness of fruits in people’s daily diet as they play an important role in determining public health and also considering the significance of pesticide residues in foods and fruits , measurement of which has been repeatedly reiterated by WHO and FAO, this research was done. Irregular use of pesticides by farmers knowingly or unknowingly without observing its caress period has led to the contact of these pesticides with humans through foods and fruits and in the long run, they will surely cause chronic complications . Methods: In this study, after collecting cucumbers form 76 sample regions, we rinsed them carefully, sliced them thinly and mashed them up. Then, we extracted them three times with n butyl acetate. Later, we evaporated the solvent. At the end, we measured the residue by chromatographic gas (GC and detector (ECD. Results and Conclusion: The results obtained were analyzed with the help of two-way ANOVA. It indicated that there is a correlation between the investigated regions and the residual amount (P>0.05. Calculation of the mean ratings showed that the levels of these two pesticides are higher than the acceptable level in most of the regions. (0.01

  8. A suppressor locus for MODY3-diabetes

    Science.gov (United States)

    Garcia-Gonzalez, Miguel A.; Carette, Claire; Bagattin, Alessia; Chiral, Magali; Makinistoglu, Munevver Parla; Garbay, Serge; Prévost, Géraldine; Madaras, Cécile; Hérault, Yann; Leibovici, Michel; Pontoglio, Marco

    2016-01-01

    Maturity Onset Diabetes of the Young type 3 (MODY3), linked to mutations in the transcription factor HNF1A, is the most prevalent form of monogenic diabetes mellitus. HNF1alpha-deficiency leads to defective insulin secretion via a molecular mechanism that is still not completely understood. Moreover, in MODY3 patients the severity of insulin secretion can be extremely variable even in the same kindred, indicating that modifier genes may control the onset of the disease. With the use of a mouse model for HNF1alpha-deficiency, we show here that specific genetic backgrounds (C3H and CBA) carry a powerful genetic suppressor of diabetes. A genome scan analysis led to the identification of a major suppressor locus on chromosome 3 (Moda1). Moda1 locus contains 11 genes with non-synonymous SNPs that significantly interacts with other loci on chromosomes 4, 11 and 18. Mechanistically, the absence of HNF1alpha in diabetic-prone (sensitive) strains leads to postnatal defective islets growth that is remarkably restored in resistant strains. Our findings are relevant to human genetics since Moda1 is syntenic with a human locus identified by genome wide association studies of fasting glycemia in patients. Most importantly, our results show that a single genetic locus can completely suppress diabetes in Hnf1a-deficiency. PMID:27667715

  9. Occurrence of Sclerotium Rot of Cucumber Caused by Sclerotium rolfsii

    Directory of Open Access Journals (Sweden)

    Jin-Hyeuk Kwon

    2015-06-01

    Full Text Available Sclerotium rot of cucumber (Cucumis sativus L. occurred at the experimental field of Gyeongsangnam-do Agricultural Research and Extension Services in July 2012. The typical symptoms included wilt, rot, and water-soaking on stems and fruits and severely infected plants eventually died. White mycelial mats spread over lesions, and then sclerotia were formed on fruit and near soil line. The sclerotia were globoid in shape, white to brown in color and 1−3 mm in size and the hyphal width was 4−8 μm. The optimum temperature for mycelial growth and sclerotia formation on PDA was 30oC. The typical clamp connections were observed in the hyphae of the fungus grown on PDA. For further identification, the complete internal transcribed spacer (ITS rDNA region was amplified and sequenced. On the basis of mycological characteristics, ITS rDNA region comparison, and pathogenicity to host plants, this fungus was identified as Sclerotium rolfsii Saccardo. This is the first report of sclerotium rot on cucumber caused by S. rolfsii in Korea.

  10. [Allelopathy of different plants on wheat, cucumber and radish seedlings].

    Science.gov (United States)

    Shen, Huimin; Guo, Hongru; Huang, Gaobao

    2005-04-01

    By means of bioassay in laboratory and field, this paper studied the allelopathy of 18 kinds of plants in Gansu Province on the seedlings of wheat, cucumber and radish. The results showed that the aqueous extract of the stems and leaves of Artemisia annua, Solanum nigrum and Datura stramonium had the strongest allelopathy on test receptor plants, and their synthetic inhibitory effect (SE) was 47.66%, 32.89% and 26.63%, respectively. The SE of Xanthium sibiricum, Portulaca oleraca, Cephalanoplos segetum, and Chenopodium album was 21.71%, 20.93%, 20.83% and 20.2%, respectively, while Vicia amoena (SE 3.5%), Setaria viridis (SE 2.2%), and Cymamchum chinense (SE 1.97%) had a weaker allelopathy. Chenopodium ambrosioides (SE - 1.03%), Polygonum caespitosum (SE - 1.63%) and Avena fatua (SE 5.33%) had no evident allelopathy, but Artemisia annua affected the seedling height and fresh weight of radish, cucumber, wheat and maize, with the SE being 54.07%, 38.46%, 33.35% and 20.88%, respectively. Artemisia annua had a 44.70% of SE on wheat growth, and thus, had a certain value to develop and use.

  11. [Salt stress tolerance of cucumber-grafted rootstocks].

    Science.gov (United States)

    Wang, Li-Ping; Sun, Jin; Guo, Shi-Rong; Liu, Shu-Ren; Liu, Chao-Jie; Tian, Jing

    2012-05-01

    Taking 4 different Cucurbita maxima x C. moschata rootstocks for cucumber (Cucumis sativus) as test materials, a solution culture experiment was conducted to study their growth and antioxidative enzyme activities under the stresses of Ca(NO3)2 and NaCl, with the salt stress tolerance of the rootstocks evaluated by subordinate function. At 30 mmol x L(-1) of Ca (NO3)2 or 45 mmol x L(-1) of NaCl, the growth of the rootstock seedlings was improved; but at 60 and 120 mmol x L(-1) of Ca(NO3)2 or 90 and 180 mmol x L(-1) of NaCl, the growth and the antioxidative systems of the seedlings were inhibited, and the salt injury index of 'Qingzhen No. 1' was the smallest, with the decrement of biomass and SOD, POD and CAT activities and the increment of relative conductance being significantly lower than those of the others. Under the stress of high concentration Ca(NO3)2, the SOD, POD and CAT activities of test rootstocks were higher, and the salt injury index and relative conductance were lower, as compared with those under high concentration NaCl, suggesting that the damage of Ca(NO3)2 stress to cucumber-grafted rootstock were smaller than that of NaCl stress. Among the 4 rootstocks, 'Qingzhen No. 1' had the strongest salt stress tolerance, followed by 'Zuomu Nangua', 'Fengyuan Tiejia', and 'Chaoba Nangua'.

  12. Anticancer Activity from Active Fraction of Sea Cucumber

    Directory of Open Access Journals (Sweden)

    Nurul Mutia Putram

    2017-05-01

    Full Text Available Sea Cucumber Holothuria atra is one of marine organisms has been used as a new source of novel bioactive compounds. Many of them have been used as the lead compounds in discovery of new anticancer drugs. The objective of this study was to determine the active fractions of sea cucumber (H. atra which have anticancer activity. H. atra was macerated using ethanol and the extract was freezedried using a freeze dryer. The crude extract was partitioned using n-hexane, ethyl acetate, and methanol-water (3:1:1:1. Cytotoxicity test was performed using HeLa (cervic cancer cell line and MCF-7 (breast cancer cell line based on the MTT assay. The crude extract of H. atra showed the best cytotoxic activity against HeLa cells (IC50 = 12.48 µg/mL and MCF-7 cells (IC50 = 17.90 µg/mL. The toxicity tests showed the IC50 value of the n-hexane fraction, ethyl acetate fraction, and methanol-water fraction against HeLa cells HeLa (IC50 = 76.45 µg/mL; 77.95 µg/mL;  14.27 µg/mL and MCF-7 cells (IC50 = 58.50 µg/mL; 59.59 µg/mL; 14.33 µg/mL.

  13. Arsenic speciation in xylem sap of cucumber (Cucumis sativus L.)

    Energy Technology Data Exchange (ETDEWEB)

    Mihucz, Victor G. [Joint Research Group of Environmental Chemistry of the Hungarian Academy of Sciences and L. Eoetvoes University, Budapest (Hungary); Hungarian Satellite Centre of Trace Elements Institute to UNESCO, Budapest (Hungary); Tatar, Eniko [Hungarian Satellite Centre of Trace Elements Institute to UNESCO, Budapest (Hungary); L. Eoetvoes University, Department of Inorganic and Analytical Chemistry, Budapest (Hungary); Virag, Istvan [L. Eoetvoes University, Department of Inorganic and Analytical Chemistry, Budapest (Hungary); Cseh, Edit; Fodor, Ferenc [L. Eoetvoes University, Department of Plant Physiology, Budapest (Hungary); Zaray, Gyula [Joint Research Group of Environmental Chemistry of the Hungarian Academy of Sciences and L. Eoetvoes University, Budapest (Hungary); Hungarian Satellite Centre of Trace Elements Institute to UNESCO, Budapest (Hungary); L. Eoetvoes University, Department of Inorganic and Analytical Chemistry, Budapest (Hungary)

    2005-10-01

    Flow injection analysis (FIA) and high-performance liquid chromatography double-focusing sector field inductively coupled plasma mass spectrometry (HPLC-DF-ICP-MS) were used for total arsenic determination and arsenic speciation of xylem sap of cucumber plants (Cucumis sativus L.) grown in hydroponics containing 2 {mu}mol dm{sup -3} arsenate or arsenite, respectively. Arsenite [As(III)], arsenate [As(V)] and dimethylarsinic acid (DMA) were identified in the sap of the plants. Arsenite was the predominant arsenic species in the xylem saps regardless of the type of arsenic treatment, and the following concentration order was determined: As(III) > As(V) > DMA. The amount of total As, calculated taking into consideration the mass of xylem sap collected, was almost equal for both treatments. Arsenite was taken up more easily by cucumber than arsenate. Partial oxidation of arsenite to arsenate (<10% in 48 h) was observed in the case of arsenite-containing nutrient solutions, which may explain the detection of arsenate in the saps of plants treated with arsenite. (orig.)

  14. Autolysis and extension of isolated walls from growing cucumber hypocotyls.

    Science.gov (United States)

    Cosgrove, D J; Durachko, D M

    1994-11-01

    Walls isolated from cucumber hypocotyls retain autolytic activities and the ability to extend when placed under the appropriate conditions. To test whether autolysis and extension are related, we treated the walls in various ways to enhance or inhibit long-term wall extension ('creep') and measured autolysis as release of various saccharides from the wall. Except for some non-specific inhibitors of enzymatic activity, we found no correlation between wall extension and wall autolysis. Most notably, autolysis and extension differed strongly in their pH dependence. We also found that exogenous cellulases and pectinases enhanced extension in native walls, but when applied to walls previously inactivated with heat or protease these enzymes caused breakage without sustained extension. In contrast, pretreatment of walls with pectinase or cellulase, followed by boiling in methanol to inactivate the enzymes, resulted in walls with much stronger expansin-mediated extension responses. Crude protein preparations from the digestive tracts of snails enhanced extension of both native and inactivated walls, and these preparations contained expansin-like proteins (assessed by Western blotting). Our results indicate that the extension of isolated cucumber walls does not depend directly on the activity of endogenous wall-bound autolytic enzymes. The results with exogenous enzymes suggest that the hydrolysis of matrix polysaccharides may not induce wall creep by itself, but may act synergistically with expansins to enhance wall extension.

  15. Extraction and Characterization of Collagen from Sea Cucumber Flesh

    Directory of Open Access Journals (Sweden)

    Alhana

    2015-11-01

    Full Text Available Sea cucumber (Stichopus variegatus is one of the Echinodermata phylum that grows along Indonesian coastal. Sea cucumber is potential source of collagen. The purposes of this research were to determine the optimal concentration of NaOH and CH3COOH solution in collagen production and analyze the physicochemical characteristics of collagen from S. variegatus. Yield of the collagen was 1.5% (based on wet weight basis, produced by pretreatment with NaOH 0,30%, hydrolysis with CH3COOH 0.10% and extracted using distilled water. Protein, moisture, and ash content of the collagen was 67.68%, 13.64%, and 4.15%, respectively. Collagen was extracted using distilled water at 45°C during 2h and still had triple helix structure ; pH 7.37 ; melting temperature 163.67°C and whiteness 69.25%. The major amino acid content of collagen were glycine, alanine, proline and glutamic acid.

  16. rgs-CaM Detects and Counteracts Viral RNA Silencing Suppressors in Plant Immune Priming.

    Science.gov (United States)

    Jeon, Eun Jin; Tadamura, Kazuki; Murakami, Taiki; Inaba, Jun-Ichi; Kim, Bo Min; Sato, Masako; Atsumi, Go; Kuchitsu, Kazuyuki; Masuta, Chikara; Nakahara, Kenji S

    2017-10-01

    Primary infection of a plant with a pathogen that causes high accumulation of salicylic acid in the plant typically via a hypersensitive response confers enhanced resistance against secondary infection with a broad spectrum of pathogens, including viruses. This phenomenon is called systemic acquired resistance (SAR), which is a plant priming for adaption to repeated biotic stress. However, the molecular mechanisms of SAR-mediated enhanced inhibition, especially of virus infection, remain unclear. Here, we show that SAR against cucumber mosaic virus (CMV) in tobacco plants (Nicotiana tabacum) involves a calmodulin-like protein, rgs-CaM. We previously reported the antiviral function of rgs-CaM, which binds to and directs degradation of viral RNA silencing suppressors (RSSs), including CMV 2b, via autophagy. We found that rgs-CaM-mediated immunity is ineffective against CMV infection in normally growing tobacco plants but is activated as a result of SAR induction via salicylic acid signaling. We then analyzed the effect of overexpression of rgs-CaM on salicylic acid signaling. Overexpressed and ectopically expressed rgs-CaM induced defense reactions, including cell death, generation of reactive oxygen species, and salicylic acid signaling. Further analysis using a combination of the salicylic acid analogue benzo-(1,2,3)-thiadiazole-7-carbothioic acid S-methyl ester (BTH) and the Ca(2+) ionophore A23187 revealed that rgs-CaM functions as an immune receptor that induces salicylic acid signaling by simultaneously perceiving both viral RSS and Ca(2+) influx as infection cues, implying its autoactivation. Thus, secondary infection of SAR-induced tobacco plants with CMV seems to be effectively inhibited through 2b recognition and degradation by rgs-CaM, leading to reinforcement of antiviral RNA silencing and other salicylic acid-mediated antiviral responses.IMPORTANCE Even without an acquired immune system like that in vertebrates, plants show enhanced whole

  17. Mapping Mammary Carcinoma Suppressor Genes in the Laboratory Rat

    Science.gov (United States)

    1997-07-01

    AD GRANT NUMBER DAMDI7-94-J-4040 TITLE: Mapping Mammary Carcinoma Suppressor Genes in the Laboratory Rat PRINCIPAL INVESTIGATOR: Michael Gould, Ph.D...Carcinoma Suppressor Genes in the Laboratory Rat DAMDI7-94-J-4040 6. AUTHOR(S) Michael Gould, Ph.D. Hong Lan, Ph.D. 7. PERFORMING ORGANIZATION NAME(S) AND

  18. Tumour suppressor genes in sporadic epithelial ovarian cancer

    DEFF Research Database (Denmark)

    Liu, Ying; Ganesan, Trivadi S

    2002-01-01

    of the evolution of tumour progression. A major focus of research has been to identify tumour suppressor genes implicated in sporadic ovarian cancer over the past decade. Several tumour suppressor genes have been identified by strategies such as positional cloning and differential expression display. Further...

  19. Echinoside-B from the Lakshadweep sea cucumber Actinopyga mauritiana (Quoy and Gaimard)

    Digital Repository Service at National Institute of Oceanography (India)

    Parameswaran, P.S.; Naik, C.G.; Das, B.; Kamat, S.Y.

    Brine-shrimp assay guided purification of the methanolic extract of the sea cucumber Actinopyga mauritiana yields echinoside-B as a major toxic constituent. The compound has been characterized based on its spectral data....

  20. Microbiological preservation of cucumbers for bulk storage using acetic acid and food preservatives.

    Science.gov (United States)

    Pérez-Díaz, I M; McFeeters, R F

    2008-08-01

    Microbial growth did not occur when cucumbers were preserved without a thermal process by storage in solutions containing acetic acid, sodium benzoate, and calcium chloride to maintain tissue firmness. The concentrations of acetic acid and sodium benzoate required to ensure preservation were low enough so that stored cucumbers could be converted to the finished product without the need to wash out and discard excess acid or preservative. Since no thermal process was required, this method of preservation would be applicable for storing cucumbers in bulk containers. Acid tolerant pathogens died off in less than 24 h with the pH, acetic acid, and sodium benzoate concentrations required to assure the microbial stability of cucumbers stored at 30 degrees C. Potassium sorbate as a preservative in this application was not effective. Yeast growth was observed when sulfite was used as a preservative.

  1. A hyperspectral imaging prototype for online quality evaluation of pickling cucumbers

    Science.gov (United States)

    A hyperspectral imaging prototype was developed for online evaluation of external and internal quality of pickling cucumbers. The prototype had several new, unique features including simultaneous reflectance and transmittance imaging and inline, real time calibration of hyperspectral images of each ...

  2. Technological aspects of keeping and pickling qualities of cucumbers as influenced by fertilizers.

    Science.gov (United States)

    Bakr, A A; Gawish, R A

    1993-07-01

    The effect of the interactions between K (potassium) and Ca (calcium) applications (preharvest treatment), packaging method and storage conditions on the keeping and pickling qualities of cucumber were investigated. Spraying with 100 ppm K and 5000 ppm Ca prolonged the shelf-life of cucumber, especially when packaged in perforated polyethylene and stored at refrigeration conditions. Packaging and refrigeration both reduced weight loss and decay percentages. Decay was greater in packaged fruits stored at high temperature. Packaging had only a slight effect on chemical composition. Packaged fruits from plants sprayed with 100 ppm K maintained their fresh appearance and firmness > or = 3 times longer than a control sample at ambient conditions and over 20 days under refrigeration. Sensory evaluation of pickled cucumbers revealed that both K and Ca applications on plants during growth improved substantially the pickling quality of cucumber.

  3. Putative paternal factors controlling chilling tolerance in Korean market-type cucumber (Cucumis sativus L.)

    Science.gov (United States)

    Chilling temperatures (Cucumis sativus L.) plants during winter and early spring growing seasons. Inheritance to chilling in U.S. processing cucumber is controlled by cytoplasmic (maternally) and nuclear factors. To understand inherit...

  4. Current status of genetic transformation technology developed in cucumber (Cucumis sativus L.)

    Institute of Scientific and Technical Information of China (English)

    WANG Shun-li; Seong Sub Ku; YE Xing-guo; HE Cong-fen; Suk Yoon Kwon; Pil Son Choi

    2015-01-01

    Genetic transformation is an important technique for functional genomics study and genetic improvement of plants. Until now, Agrobacterium-mediated transformation methods using cotyledon as explants has been the major approach for cu-cumber, and its frequency has been up to 23%. For example, signiifcantly enhancement of the transformation efifciency of this plant species was achieved from the cotyledon explants of the cultivar Poinsett 76 infected by Agrobacterium strains EHA105 with efifcient positive selection system in lots of experiments. This review is to summarize some key factors in-lfuencing cucumber regeneration and genetic transformation, including target genes, selection systems and the ways of transgene introduction, and then to put forward some strategies for the increasing of cucumber transformation efifciency. In the future, it is high possible for cucumber to be potential bioreactor to produce vaccine and biomaterials for human beings.

  5. Odontonema cuspidatum and Psychotria punctata, two new cucumber mosaic virus hosts identified in Florida

    Science.gov (United States)

    The wide host range of Cucumber mosaic virus (CMV) has been expanded by the identification of Odontonema cuspidatum (firespike) and Psychotria punctata (dotted wild coffee) as CMV hosts in Florida....

  6. The Physiologic Reaction of Cucumber to Low Temperature and Low Light Intensity

    Institute of Scientific and Technical Information of China (English)

    CHEN Qing-jun; ZHANG Fu-man; WANG Yong-jian; Kurata Kenji

    2003-01-01

    The dynamics of chlorophyll content, leaf area and photosynthesis of cucumber seedlings were studied under sole stress of two low temperatures and low light intensity as well as combined stresses of low light intensity and the two low temperatures. The results showed that low light intensity reduced sensitivity of cucumber to low temperature and improved chlorophyll content, leaf area and chlorophyll fluorescence quantum yield. The photosynthesis rate was reduced under low light intensity. The intensity of light played the leading role in growth of cucumber under the low temperature condition, while the low temperature played the leading role under the critical low temperature condition. There were differences in reaction to light and temperature among different varieties. The tolerance to low temperature and low light intensity was not always synergetic for the same cucumber variety.

  7. [Effects of bio-fertilizer on organically cultured cucumber growth and soil biological characteristics].

    Science.gov (United States)

    Cao, Dan; Zong, Liang-gang; Xiao, Jun; Zhang, Qian; Zhao, Yan

    2010-10-01

    Field trials of organic farming were conducted to examine the effects of different bio-fertilizers on the organically cultured cucumber growth, soil enzyme activities, and soil microbial biomass. Four treatments were installed, i. e., organic fertilizer only (CK), bio-fertilizer "Zhonghe" combined with organic fertilizer (ZHH), bio-fertilizer "NST" combined with organic fertilizer (NST), and bio-fertilizer "Bio" combined with organic fertilizer (BIO). Bio-fertilizers combined with organic fertilizer increased the cucumber yield significantly, and improved the root growth and leaf chlorophyll content. Comparing with that in CK, the cucumber yield in treatments ZHH, NST, and BIO was increased by 10.4%, 12.4%, and 29.2%, respectively. At the seedling stage, early flowering stage, and picking time of cucumber, the soil microbial biomass C and N in treatments ZHH, NST, and BIO were significantly higher than that in CK, and the activities of soil urease, acid phosphatase, and catalase were also higher.

  8. Analysis of fatty acid composition of sea cucumber Apostichopus japonicus using multivariate statistics

    Science.gov (United States)

    Xu, Qinzeng; Gao, Fei; Xu, Qiang; Yang, Hongsheng

    2014-11-01

    Fatty acids (FAs) provide energy and also can be used to trace trophic relationships among organisms. Sea cucumber Apostichopus japonicus goes into a state of aestivation during warm summer months. We examined fatty acid profiles in aestivated and non-aestivated A. japonicus using multivariate analyses (PERMANOVA, MDS, ANOSIM, and SIMPER). The results indicate that the fatty acid profiles of aestivated and non-aestivated sea cucumbers differed significantly. The FAs that were produced by bacteria and brown kelp contributed the most to the differences in the fatty acid composition of aestivated and nonaestivated sea cucumbers. Aestivated sea cucumbers may synthesize FAs from heterotrophic bacteria during early aestivation, and long chain FAs such as eicosapentaenoic (EPA) and docosahexaenoic acid (DHA) that produced from intestinal degradation, are digested during deep aestivation. Specific changes in the fatty acid composition of A. japonicus during aestivation needs more detailed study in the future.

  9. Construction of a BAC library from cucumber (Cucumis sativus L.) and identification of linkage group specific clones

    Institute of Scientific and Technical Information of China (English)

    Yuan Guan; Qi Chen; Junsong Pan; Zheng Li; Huanle He; Aizhong Wu; Rentao Song; Run Cai

    2008-01-01

    A bacterial artificial chromosome (BAC) library consisting of 19,200 clones with an average insert size of 105 kb has been constructed from a cucumber (Cucumis sativus L.) inbred line S94, derived from a cultivar in North China. The entire library was equivalent to approximately 5 haploid cucumber genomes. To facilitate chromosome engineering and anchor the cucumber genetic linkage map to its chromosomes, 15 sequence-characterized amplified regions (SCAR) and seven simple sequence repeats (SSR) markers from each link-age group of cucumber were used to screen an ordered array of pooled BAC DNA with polymerase chain reaction (PCR). Fifteen mark-ers gave at least two positive clones. As a result, 22 BAC clones representing 7 linkage groups of cucumber were identified, which further validated the genome coverage and utility of the library. This BAC library and linkage group specific clones provide essential resources for future research of the cucumber genome.

  10. Detection of fruit fly infestation in pickling cucumbers using hyperspectral imaging

    Science.gov (United States)

    Lu, Renfu; Ariana, Diwan P.

    2011-06-01

    Fruit fly infestation can be a serious problem in pickling cucumber production. In the United States and many other countries, there is zero tolerance for fruit flies in pickled products. Currently, processors rely on manual inspection to detect and remove fruit fly-infested cucumbers, which is labor intensive and also prone to error due to human fatigue and the difficulty of visually detecting infestation that is hidden inside the fruit. In this research, a laboratory hyperspectral imaging system was used to detect fruit fly-infested pickling cucumbers. Hyperspectral reflectance (450-740 nm) and transmittance (740-1,000 nm) images were acquired simultaneously for 329 normal (infestation free) and fruit flyinfested pickling cucumbers of three size classes with the mean diameters of 16.8, 22.1, and 27.6 mm, respectively. Mean spectra were extracted from the hyperspectral image of each cucumber, and they were then corrected for the fruit size effect using a diameter correction equation. Partial least squares discriminant analyses for the reflectance, transmittance and their combined data were performed for differentiating normal and infested pickling cucumbers. With reflectance mode, the overall classification accuracies for the three size classes and mixed class were between 82% and 88%, whereas transmittance achieved better classification results with the overall accuracies of 88%-93%. Integration of reflectance and transmittance did not result in noticeable improvements, compared to transmittance mode. Overall, the hyperspectral imaging system performed better than manual inspection, which had an overall accuracy of 75% and decreased significantly for smaller size cucumbers. This research demonstrated that hyperspectral imaging is potentially useful for detecting fruit fly-infested pickling cucumbers.

  11. Necrotrophic fungi associated with epidermal microcracking caused by chilling injury in pickling cucumber fruit

    OpenAIRE

    2008-01-01

    The objective of this work was to visualize the association between microcracking and other epidermal chilling injury symptoms, and to identify rots in cucumber fruit (Cucumis sativus L.) by scanning electron microscopy (SEM). Depressed epidermal areas and surface cracking due to damages of subepidermal cells characterized the onset of pitting in cucumber fruit. The germination of conidia of Alternaria alternata, with some of them evident on the fractures in the cultivar Trópico, occurred aft...

  12. Climatic Risk of Field Cultivation of Cucumber (Cucumis sativus L.) in Poland

    OpenAIRE

    2010-01-01

    The goal of the present work was to separate zones of pickling cucumber field cultivation in Poland according to the various degrees of climatic risk. The study used 40-years of (1966-2005) data from 28 experimental stations of the Research Centre for Cultivar Testing. The data characterised the course of the growth, development, cucumber crop productivity and also the agrotechnical dates. Additionally, the work considered agrometeorological data of 7 development stages of the analysed plant:...

  13. Two biologically distinct isolates of Zucchini yellow mosaic virus lack seed transmissibility in cucumber.

    Science.gov (United States)

    Glasa, M; Kollerova, E

    2007-01-01

    The seed transmission of the Zucchini yellow mosaic virus (ZYMV) was studied in cucumber using two isolates unrelated in their biological characteristics. Although the virus could be readily detected in mature seeds harvested from infected cucumbers, the seedlings obtained from infected germinated seeds tested negative for ZYMV using both ELISA and RT-PCR assays. No evidence was obtained for transmission of two ZYMV isolates through seeds.

  14. Effect of vinegar residue compost amendments on cucumber growth and Fusarium wilt.

    Science.gov (United States)

    Du, Nanshan; Shi, Lu; Du, Lantian; Yuan, Yinghui; Li, Bin; Sang, Ting; Sun, Jin; Shu, Sheng; Guo, Shirong

    2015-12-01

    Fusarium wilt of cucumber caused by Fusarium oxysporum f. sp. cucumerinum J. H. Owen is one of the major destructive soilborne diseases and results in considerable yield losses. Methyl bromide was once the most effective disease control method but has been confirmed as harmful to the environment. Using suppressive media as biological controls to assist crop growth is becoming popular. In this study, Fusarium wilt of cucumber was successfully controlled by a newly identified suppressive media: vinegar residue compost-amended media (vinegar residue compost mixed with peat and vermiculite in a 6:3:1 ratio (v/v) vinegar residue substrate (VRS). Greenhouse experiments were carried out to evaluate the effect of VRS on the growth of cucumber seedlings and disease suppression. The control was peat/vermiculite (2:1, v/v). To identify the mixed media most suitable for the growth of plants and their suppressiveness indicators, we evaluated the biological characteristics of cucumber, the physicochemical and biochemical properties of the growth media, and the enzyme activities. Total organic C (C(org)), microbial biomass C (C(mic)), basal respiration (R(mic)), and enzyme (catalase, invertase, urease, proteinase, phosphatase, β-glucosidase, and hydrolysis of fluorescein diacetate) activities increased significantly after vinegar waste compost amendment. The compost media also showed a significantly positive effect on the growth of cucumber seedlings and the suppression of the disease severity index (DSI, 38% reduction). The cucumber rhizosphere population of F. oxysporum f. sp. cucumerinum (FOC) was significantly lower in VRS than in the control. These results demonstrate convincingly that vinegar residue compost-amended media has a beneficial effect on cucumber growth and could be applied as a method for biological control of cucumber Fusarium wilt.

  15. Immunological comparison of the NADH:nitrate reductase from different cucumber tissues

    Directory of Open Access Journals (Sweden)

    Jolanta Marciniak

    2014-01-01

    Full Text Available Soluble nitrate reductase from cucumber roots (Cucumis sativus L. was isolated and purified with blue-Sepharose 4B. Specific antibodies against the NR protein were raised by immunization of a goat. Using polyclonal antibodies anti-NR properties of the nitrate reductase from various cucumber tissues were examined. Experiments showed difference in immuno-logical properties of nitrate reductase (NR from cotyledon roots and leaves.

  16. Tumor suppressor genes in familial adenomatous polyposis.

    Science.gov (United States)

    Eshghifar, Nahal; Farrokhi, Naser; Naji, Tahereh; Zali, Mohammadreza

    2017-01-01

    Colorectal cancer (CRC) is mostly due to a series of genetic alterations that are being greatly under the influence of the environmental factors. These changes, mutational or epigenetic modifications at transcriptional forefront and/or post-transcriptional effects via miRNAs, include inactivation and the conversion of proto-oncogene to oncogenes, and/or inactivation of tumor suppressor genes (TSG). Here, a thorough review was carried out on the role of TSGs with the focus on the APC as the master regulator, mutated genes and mal-/dysfunctional pathways that lead to one type of hereditary form of the CRC; namely familial adenomatous polyposis (FAP). This review provides a venue towards defining candidate genes that can be used as new PCR-based markers for early diagnosis of FAP. In addition to diagnosis, defining the modes of genetic alterations will open door towards genome editing to either suppress the disease or reduce its progression during the course of action.

  17. Microbial Regulation of p53 Tumor Suppressor.

    Directory of Open Access Journals (Sweden)

    Alexander I Zaika

    2015-09-01

    Full Text Available p53 tumor suppressor has been identified as a protein interacting with the large T antigen produced by simian vacuolating virus 40 (SV40. Subsequent research on p53 inhibition by SV40 and other tumor viruses has not only helped to gain a better understanding of viral biology, but also shaped our knowledge of human tumorigenesis. Recent studies have found, however, that inhibition of p53 is not strictly in the realm of viruses. Some bacterial pathogens also actively inhibit p53 protein and induce its degradation, resulting in alteration of cellular stress responses. This phenomenon was initially characterized in gastric epithelial cells infected with Helicobacter pylori, a bacterial pathogen that commonly infects the human stomach and is strongly linked to gastric cancer. Besides H. pylori, a number of other bacterial species were recently discovered to inhibit p53. These findings provide novel insights into host-bacteria interactions and tumorigenesis associated with bacterial infections.

  18. The Syndrome of Sea Cucumber (Apostichopus japonicus) Infected by Virus and Bacteria

    Institute of Scientific and Technical Information of China (English)

    Huan DENG; Zun-chun ZHOU; Nian-bin WANG; Chang LIU

    2008-01-01

    A outbreak of disease with symptoms of evisceration and skin ulteration led to mass mortality in sea cucumber Apostichopus japonicus cultivated in indoor ponds near the Dalian coast from December 2004 to April 2005. Spherical virus particles with a diameter of 75-200 nm were found in the cytoplasm of cells in the water-system, the alimentary canal and in the respiratory trees of the diseased and dying sea cucumber individuals by electron microscopic observation of ultrathin sections. Examination by negative stained samples revealed that all the diseased sea cucumbers were infected by the virus, while the healthly ones cultivated outside the contagious area were not. Two bacterial strains were also isolated from the diseased animals. When exposed to a medium containing the virus particles, regardless of whether the bacterial suspension was added,healthy sea cucumbers exhibited identical disease symptoms as the ones in the indoor ponds, and had a mortality of 90%-100%. However, when exposed to a medium in which there was only one of the two bacterial strains, 30%-80% of the sea cucumbers were infected and nearly 20% died. Negative staining showed that the viral particles were detected only in the bodies of the tested animals that were exposed to the viral medium. Histopathologically, the diseased sea cucumbers are characterized by karyopycnosis, and disintegration of the endoplasmic reticula and mitochondria in the epithelial cells in the water-system, the respiratory tree and the alimentary canal.

  19. Identification of differentially expressed genes related to aphid resistance in cucumber (Cucumis sativus L.).

    Science.gov (United States)

    Liang, Danna; Liu, Min; Hu, Qijing; He, Min; Qi, Xiaohua; Xu, Qiang; Zhou, Fucai; Chen, Xuehao

    2015-05-11

    Cucumber, a very important vegetable crop worldwide, is easily damaged by pests. Aphids (Aphis gossypii Glover) are among the most serious pests in cucumber production and often cause severe loss of yield and make fruit quality get worse. Identifying genes that render cucumbers resistant to aphid-induced damage and breeding aphid-resistant cucumber varieties have become the most promising control strategies. In this study, a Illumina Genome Analyzer platform was applied to monitor changes in gene expression in the whole genome of the cucumber cultivar 'EP6392' which is resistant to aphids. Nine DGE libraries were constructed from infected and uninfected leaves. In total, 49 differentially expressed genes related to cucumber aphid resistance were screened during the treatment period. These genes are mainly associated with signal transduction, plant-pathogen interactions, flavonoid biosynthesis, amino acid metabolism and sugar metabolism pathways. Eight of the 49 genes may be associated with aphid resistance. Finally, expression of 9 randomly selected genes was evaluated by qRT-PCR to verify the results for the tag-mapped genes. With the exception of 1-aminocyclopropane-1-carboxylate oxidase homolog 6, the expression of the chosen genes was in agreement with the results of the tag-sequencing analysis patterns.

  20. High-Value Components and Bioactives from Sea Cucumbers for Functional Foods—A Review

    Directory of Open Access Journals (Sweden)

    Nazamid Saari

    2011-10-01

    Full Text Available Sea cucumbers, belonging to the class Holothuroidea, are marine invertebrates, habitually found in the benthic areas and deep seas across the world. They have high commercial value coupled with increasing global production and trade. Sea cucumbers, informally named as bêche-de-mer, or gamat, have long been used for food and folk medicine in the communities of Asia and Middle East. Nutritionally, sea cucumbers have an impressive profile of valuable nutrients such as Vitamin A, Vitamin B1 (thiamine, Vitamin B2 (riboflavin, Vitamin B3 (niacin, and minerals, especially calcium, magnesium, iron and zinc. A number of unique biological and pharmacological activities including anti-angiogenic, anticancer, anticoagulant, anti-hypertension, anti-inflammatory, antimicrobial, antioxidant, antithrombotic, antitumor and wound healing have been ascribed to various species of sea cucumbers. Therapeutic properties and medicinal benefits of sea cucumbers can be linked to the presence of a wide array of bioactives especially triterpene glycosides (saponins, chondroitin sulfates, glycosaminoglycan (GAGs, sulfated polysaccharides, sterols (glycosides and sulfates, phenolics, cerberosides, lectins, peptides, glycoprotein, glycosphingolipids and essential fatty acids. This review is mainly designed to cover the high-value components and bioactives as well as the multiple biological and therapeutic properties of sea cucumbers with regard to exploring their potential uses for functional foods and nutraceuticals.

  1. Residues and Analysis of Degradation of Novel Fungicide Picoxystrobin in Cucumber and Soil Under Field Conditions

    Directory of Open Access Journals (Sweden)

    SUN Yang

    2014-10-01

    Full Text Available The analytical method for the residues of picoxystrobin in cucumber vegetable and soil matrices was developed and the dissipation of picoxystrobin under field conditions was studied. The limit of detection(LODof picoxystrobin was 3.5×10 -11 g and the limit of quantifica-tion(LOQwas found to be 0.005 mg·kg -1 in cucumber and soil. At three different spiking levels(0.005, 0.05, 0.25 mg·kg -1, mean recoveries and relative standard deviation(RSDfrom fortified samples in five replicated experiments for each matrix were in the range of 68.61%-122.4% and 1.06%-17.2%, respectively. The results showed that the half-lives of picoxystrobin in cucumber and soil from Tianjin City were 5.71 d and 12.9 d, respectively, the half-lives of picoxystrobin in cucumber and soil from Shandong Province were 2.70 d and 10.3 d, respec-tively, and the half-lives of picoxystrobin in cucumber and soil from Jiangsu Province were 9.76 d and 14.9 d, respectively. The maximum residual concentration of picoxystrobin on the 5th day after the last application was 0.014 mg· kg -1, much lower than the Maximum Residue Limits(MRLsfor picoxystrobin in cucumber according to the standards of EU(0.05 mg·kg-1.

  2. Habitat characteristic of two selected locations for sea cucumber ranching purposes

    Science.gov (United States)

    Hartati, Retno; Trianto, Agus; Widianingsih

    2017-02-01

    Sea cucumbers face heavily overfished because of their high prices and very strong market demand. One effort suggested to overcome this problem is sea ranching. The objectives of present works were to determine biological, physical, and chemical characteristics of prospective location for sea ranching of sea cucumber Holothuria atra. Two location at Jepara Waters (Teluk Awur and Bandengan WateRs of Jepara Regency) were selected. The determination of chemical (salinity, temperature, dissolved oxygen of water, phosphate, nitrate, nitrite and ammonium of water and sediment, organic matters of sediment), physical (transparancy, sedimen grains size, water current direction and its velocity), biologycal characteristic (coverage of seagrass and its macroalgae associated, phytoplankton as well as chlorophyl-a and phaeopytin of water and sediment) ware determined. The result of present work showed that some characteristic were matched with requirement as sea ranching location of sea cucumber because the density of sea cucumber in the sea is a function of habitat features. For sediment feeding holothurians of the family Aspidochirotida, the biologycal characteristic act as very important considerations by providing sea cucumber food. High cholophyl-a and phaeopytin in sediment also represent a prosperous habitat for sea cucumber ranching.

  3. Silicon Application Effects on Yield and Growth of Two Cucumber Genotypes in Hydroponics System

    Directory of Open Access Journals (Sweden)

    P. Mohaghegh

    2010-06-01

    Full Text Available Silicon (Si has beneficial effects on the growth, yield, and tolerance of some crops against biotic and abiotic stresses. Considering the absence of Si in the nutrient solutions used in hydroponically-grown cucumber, the present study was conducted to investigate the influence of Si on the growth and yield of two cucumber genotypes (Cucumis sativus L. cvs. Dominus GRC and Super Dominus. In a hydroponic experiment, two cucumber cultivars were exposed to three Si levels (0, 100, and 200 mg L-1 Si in the form of sodium silicate. The results showed that supplement of Si in the nutrient solution increased Si concentration in cucumber root and shoot. The root and shoot dry weight, crop height, and root length of cucumber plants were significantly (P< 0.05 greater in the presence of Si in comparison with the free- Si treatments. Most of the growth parameters, did not have significant difference at the 100 and 200 mg L-1 silicate levels. According to the results of the present study, it seems that the application of 100 mg/L Si in the nutrient solution could improve the growth and yield of cucumber.

  4. High-value components and bioactives from sea cucumbers for functional foods--a review.

    Science.gov (United States)

    Bordbar, Sara; Anwar, Farooq; Saari, Nazamid

    2011-01-01

    Sea cucumbers, belonging to the class Holothuroidea, are marine invertebrates, habitually found in the benthic areas and deep seas across the world. They have high commercial value coupled with increasing global production and trade. Sea cucumbers, informally named as bêche-de-mer, or gamat, have long been used for food and folk medicine in the communities of Asia and Middle East. Nutritionally, sea cucumbers have an impressive profile of valuable nutrients such as Vitamin A, Vitamin B1 (thiamine), Vitamin B2 (riboflavin), Vitamin B3 (niacin), and minerals, especially calcium, magnesium, iron and zinc. A number of unique biological and pharmacological activities including anti-angiogenic, anticancer, anticoagulant, anti-hypertension, anti-inflammatory, antimicrobial, antioxidant, antithrombotic, antitumor and wound healing have been ascribed to various species of sea cucumbers. Therapeutic properties and medicinal benefits of sea cucumbers can be linked to the presence of a wide array of bioactives especially triterpene glycosides (saponins), chondroitin sulfates, glycosaminoglycan (GAGs), sulfated polysaccharides, sterols (glycosides and sulfates), phenolics, cerberosides, lectins, peptides, glycoprotein, glycosphingolipids and essential fatty acids. This review is mainly designed to cover the high-value components and bioactives as well as the multiple biological and therapeutic properties of sea cucumbers with regard to exploring their potential uses for functional foods and nutraceuticals.

  5. 7 CFR 319.56-36 - Watermelon, squash, cucumber, and oriental melon from the Republic of Korea.

    Science.gov (United States)

    2010-01-01

    ... the Republic of Korea. Watermelon (Citrullus lanatus), squash (Cucurbita maxima), cucumber (Cucumis sativus), and oriental melon (Cucumis melo) may be imported into the United States from the Republic...

  6. Influence of the N/K ratio on the production and quality of cucumber in hydroponic system

    Directory of Open Access Journals (Sweden)

    Adriene Woods Pedrosa

    2011-10-01

    Full Text Available The objective of this work was to evaluate the quality of fruits and the nutritional status of cucumber CV. Aodai cultivated in nutrient solutions with different N:K ratios. The hydroponic cultivation was initially performed, during the vegetative growth, in nutrient solution with 1:2.0 mmol L-1 N:K, and, later, during fruit setting, in four different nutrient solutions with N:K (w/w at the ratios 1:1.4, 1:1.7, 1:2.0 and 1:2.5. An additional treatment with a nutrient solution containing the ratio 1:2.2 (w/w N:K during the vegetative growth and N:K 1:1.4 (w/w during fruit setting, both with 10% ammonium (NH4+ was included. The treatments were arranged in a randomized design with six replicates. Irrigation was carried out with deionized water until seed germination, and then with nutrient solution until 30 days after germination, when plants were transplanted. Plants in the hydroponic growing beds were irrigated with the solutions for vegetative growth, and, after 21 days, the solutions were replaced by solutions for fruit setting. At 45 and 60 days after transplanting, the fresh weight, length, diameter, volume and firmness of the fruit were evaluated, and, at 45 days after transplanting, the macronutrient concentrations in the leaves were determined. The use of different N:K ratios during fruit setting influenced the cucumber production. The ratio of 1.0:1.7 N: K (w/w, with 10% of N in the form of ammonia, is recommended for the whole cycle.

  7. Heterologous RNA-silencing suppressors from both plant- and animal-infecting viruses support plum pox virus infection.

    Science.gov (United States)

    Maliogka, Varvara I; Calvo, María; Carbonell, Alberto; García, Juan Antonio; Valli, Adrian

    2012-07-01

    HCPro, the RNA-silencing suppressor (RSS) of viruses belonging to the genus Potyvirus in the family Potyviridae, is a multifunctional protein presumably involved in all essential steps of the viral infection cycle. Recent studies have shown that plum pox potyvirus (PPV) HCPro can be replaced successfully by cucumber vein yellowing ipomovirus P1b, a sequence-unrelated RSS from a virus of the same family. In order to gain insight into the requirement of a particular RSS to establish a successful potyviral infection, we tested the ability of different heterologous RSSs from both plant- and animal-infecting viruses to substitute for HCPro. Making use of engineered PPV chimeras, we show that PPV HCPro can be replaced functionally by some, but not all, unrelated RSSs, including the NS1 protein of the mammal-infecting influenza A virus. Interestingly, the capacity of a particular RSS to replace HCPro does not correlate strictly with its RNA silencing-suppression strength. Altogether, our results suggest that not all suppression strategies are equally suitable for efficient escape of PPV from the RNA-silencing machinery. The approach followed here, based on using PPV chimeras in which an under-consideration RSS substitutes for HCPro, could further help to study the function of diverse RSSs in a 'highly sensitive' RNA-silencing context, such as that taking place in plant cells during the process of a viral infection.

  8. Diploidization of cucumber (Cucumis sativus L. haploids by colchicine treatment

    Directory of Open Access Journals (Sweden)

    Vesselina Nikolova

    2014-02-01

    Full Text Available Haploid cucumber plants are totally infertile and do not undergo spontaneous diploidization. The use of haploids depends on the possibility of doubling the chromosome number and the obtaining of stable doubled haploids (DH. Four haploids of different genotypes propagated vegetatively were treated with colchicine in order to obtain DH. The following procedures were used: 1 apical shoot meristem treatment, 2 soaking of shoot explants, 3 placing of shoot explants on medium with colchicine. Plants of the C1 generation were evaluated in respect to morphological and cytological characters and fertility. The best result of 20.9% DH was obtained after repeated treatment of the meristem with colchicine. A large group of chimeras (28.5% was also distinguished as were haploids and tetraploids. DH plants were fertile and gave uniform progeny. Chimeras had a decreased fertility and showed disturbances in meiotic divisions.

  9. Heterogeneity in pepper isolates of cucumber mosaic virus

    Science.gov (United States)

    Rodriguez-Alvarado, G.; Kurath, G.; Dodds, J.A.

    1995-01-01

    Twenty-four cucumber mosaic cucumovirus (CMV) field isolates from pepper crops in Cali-fornia were characterized and compared by nucleic acid hybridization subgrouping, virion electrophoresis, and biological effects in several hosts. Isolates, belonging to subgroup I or subgroup II, were found that induced severe symptoms in mechanically inoculated bell pep-pers. Only two isolates, both from subgroup II, were mild. A group of 19 isolates collected from a single field were all in subgroup II and appeared identical by virion electrophoresis, but they exhibited varying degrees of symptom severity in peppers. As a more detailed indicator of heterogeneity, these 19 isolates were examined by RNase protection assays to delect sequence variation in the coat protein gene region of their genomes. The patterns of bands observed were complex and a high degree of genomic heterogeneity was detected between isolates, with no apparent correlation to symptomatology in bell pepper.

  10. Triterpene Glycosides from Sea Cucumber Holothuria scabra with Cytotoxic Activity

    Institute of Scientific and Technical Information of China (English)

    HAN Hua; LI Ling; YI Yang-hua; WANG Xiao-hua; PAN Min-xiang

    2012-01-01

    Objective To study the new triterpene glycosides from sea cucumber Holothuria scabra with cytotoxic activity.Methods Triterpene glycosides from H.scabra were separated and purified by chromatography on DA-101,silica gel,and reversed-phase silica gel column,as well as RP-HPLC.Their structures were elucidated on the basis of spectral data and chemical evidence.Results Three triterpene glycosides were identified as scabraside D (1),fuscocineroside C (2),and 24-dehydroechinoside A (3).Their inhibition on P-388,A549,MKN-28,HCT116,and MCF-7 cells were significant.Conclusion Scabraside D (1) is a new triterpene glycoside,and compounds 2 and 3 are isolated from H.scabra for the first time.The glycosides 1-3 show the in vitro cytotoxicity against five human tumor cell lines in comparison to 10-hydroxycamptothecin.

  11. Differential permeation of artemia cysts and cucumber seeds by alcohols

    Science.gov (United States)

    Smith, C. W.; Siegel, S. M.

    1975-01-01

    The rate of penetration of the simpler alcohols into brine shrimp cysts and cucumber seeds was studied. In solutions below 70% the rate of penetration is related to lipid solvent capacity of the alcohol. In concentrations above 70%, particularly in absolute alcohols, methanol penetrates brine shrimp rapidly and ethanol penetrates slowly. All the other alcohols tested did not penetrate the dormant structures. Ethionine and deuteroxy-methanol did not affect the rate of penetration of methanol. It is suggested that in dehydrated membranes the lipid moiety is protected by a continuous sheet of protein. Methanol, which is fairly similar to water, is probably able to penetrate the membrane by initiating a conformation change in the protein, exposing the lipid which subsequently dissolves in the methanol thus destroying the membrane.

  12. Cytoprotective Effects of Lysophospholipids from Sea Cucumber Holothuria atra.

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    Yoshifumi Nishikawa

    Full Text Available Lysophospholipids are important signaling molecules in animals and metazoan cells. They are widely distributed among marine invertebrates, where their physiological roles are unknown. Sea cucumbers produce unique lysophospholipids. In this study, two lysophospholipids were detected in Holothuria atra for the first time, lyso-platelet activating factor and lysophosphatidylcholine, with nuclear magnetic resonance and liquid chromatography-time-of-flight mass spectrometric analyses. The lipid fraction of H. atra contained lyso-platelet activating factor and lysophosphatidylcholine, and inhibited H2O2-induced apoptosis in the macrophage cell line J774A.1. The antioxidant activity of the lysophospholipid-containing lipid fraction of H. atra was confirmed with the oxygen radical absorbance capacity method. Our results suggest that the lysophospholipids from H. atra are potential therapeutic agents for the inflammation induced by oxidative stress.

  13. Propagation of Cucumber Seedlings in Different Organic and Inorganic Media

    Directory of Open Access Journals (Sweden)

    H. Cinkilİc

    2008-05-01

    Full Text Available The objective of this study is to investigate the possibility of using grape marc and cinder an alternative media to peat for cucumber propagation and find out the results.In the study;normal grape marc, normal grape marc+25% süper coarse perlite, ground grape marc+25% süper coarse perlite, cinder+25% süper coarse perlite, peat+25% süper coarse perlite and peat were used, the best results were obtained from grape marc + 25% super coarse perlite in stem diameter, number of true leaves, weight of seedling, width of seedling, length of leaves and width of leaves; from peat + 25% super coarse perlite in length of seedling, length of seedling with root, weight of root, weight of seedling with root and length of root. The cinder which is the residue of burned coal, gave the worst results in all seedling properties.

  14. Backcross introgression of plastomic factors controlling chilling tolerance into elite cucumber (Cucumis sativus L.) germplasm: Early generation recovery of recurrent parent phenotytpe

    Science.gov (United States)

    Environmental stresses such as chilling temperatures can decrease germination, emergence, flower and fruit development, marketable yield, and postharvest fruit storage longevity in cucumber (Cucumis sativus L.). While response to chilling injury in cucumber is controlled by simple plastidic (matern...

  15. Gravitropism of cucumber hypocotyls: biophysical mechanism of altered growth

    Science.gov (United States)

    Cosgrove, D. J.

    1990-01-01

    The biophysical basis for the changes in cell elongation rate during gravitropism was examined in aetiolated cucumber (Cucumis sativus L.) hypocotyls. Bulk osmotic pressures on the two sides of the stem and in the epidermal cells were not altered during the early time course of gravitropism. By the pressure-probe technique, a small increase in turgor (0.3 bar, 30 kPa) was detected on the upper (inhibited) side, whereas there was a negligible decrease in turgor on the lower (stimulated) side. These small changes in turgor and water potential appeared to be indirect, passive consequences of the altered growth and the small resistance for water movement from the xylem, and indicated that the change in growth was principally due to changes in wall properties. The results indicate that the hydraulic conductance of the water-transport pathway was large (.25 h-1 bar-1) and the water potential difference supporting cell expansion was no greater than 0.3 bar (30 kPa). From pressure-block experiments, it appeared that upon gravitropic stimulation (1) the yield threshold of the lower half of the stem did not decrease and (2) the wall on the upper side of the stem was not made more rigid by a cross-linking process. Mechanical measurements of the stress/strain properties of the walls showed that the initial development of gravitropism did not involve an alteration of the mechanical behaviour of the isolated walls. Thus, gravitropism in cucumber hypocotyls occurs principally by an alteration of the wall relaxation process, without a necessary change in wall mechanical properties.

  16. Effect of biofertilizers on yield and yield components of cucumber

    Directory of Open Access Journals (Sweden)

    Faranak Moshabaki Isfahani

    2012-01-01

    Full Text Available Biofertilizer is defined as a substance which contains living organisms which, when applied to seed, plant surface, or soil, colonize the rhizosphere or interior of the plant and promote growth by increasing the supply or availability of primary nutrients to the host plant. Biofertilizers are well recognized as an important component of integrated plant nutrient management for sustainable agriculture and hold a great promise improve crop yield. The present study for the sake of evaluating the use of plant growth promoting rhizobacteria produced by Pseudomonas sp. and phosphate bio fertilizers produced by Pseudomonas putida strain P13 and Pantoea agglomerans strain P5 and chemical fertilizers in the separate treatments on yield and yield components of cucumber by using a factorial experiment in completely randomized block design with three repetition were performed in the field. The symbol of P represents chemical fertilizer by amount of respectively (0, 25%, 50%, 75%, 100%, B1 shows plant growth promoting rhizobacteria (PGPR and B2 indicates bio fertilizer-2. The results showed that P1B0 has the most yield, and control treatments has the least yield. P100B1 has the most length of plant and P100B0 has the least length of plant, P25B1 has the most amount of chlorophyll and P75B2 has the least chlorophyll. P75B2 has the most shoots dry weight and P100B0 has the least shoots dry weight. B1P50 has the most shoots fresh weight and P25B2 has the least shoots fresh weight. B1P50 has the most roots dry weight and P100B0 has the least roots dry weight. B1P50 has the most roots fresh weight and P25B2 has the least roots fresh weight. So the results indicate that use of biological fertilizers have caused increase yield and components yield of cucumber.

  17. Sex Determination in Sea Cucumbers: Holothuria forskali and Stichopus regalis

    Directory of Open Access Journals (Sweden)

    Filipa Pinheiro Santos

    2014-06-01

    Full Text Available Sea cucumber aquaculture is underexploited in temperate regions, and it is inexistent in Portugal. However, there are some species with a large potential for this sector, namely Stichopus regalis and Holothuria forskali, as it their nutritional value. S. regalis is a common sea cucumber that is found in a wide depth range and is currently consumed all over the world, majority in Asia, with a high commercial value. On the other hand, H. forskali is the most plentiful specie of the Portuguese coast. The purpose of this study is to evaluate sex ratio on both species through biopsy method, using biopsy needle to collect a piece of gonad. Holothurian specimens were sampled coastwise in Peniche, Portugal (39° 21′ 32″ N, 9° 22′ 40″ W. A total of 45 H. forskali were collected in the low tide and 48 S. regalis were caught by trawl method. Both species were kept in captivity during 8 months, the rearing conditions are maintained close as possible to the natural habitat, and they were placed in a sand bottom. Mortality was evaluated during conditioning period, and it was verified approximately 19% of mortality in S. regalis, although in H. forskali it was not observed. Sex identification was performed with success only in H. forskali, and sexual ratio found was 1:1. All S. regalis specimens arrived eviscerated to the Aquaculture Laboratory and it was caused by the trawl capture method. For that reason, it was not possible to assess the sexual ratio. The possibility to distinguish holothurian genre is essential to realize sexual behavior, and to ease the understanding of reproductive cycle in attempt to introduce these new species for aquaculture rearing.

  18. Infrared suppressor effect on T63 turboshaft engine performance

    Science.gov (United States)

    Bailey, E. E.; Civinskas, K. C.; Walker, C. L.

    1978-01-01

    Tests were conducted to determine if there are performance penalties associated with the installation of infrared (IR) suppressors on the T63-A-700 turboshaft engine. The testing was done in a sea-level, static test cell. The same engine (A-E402808 B) was run with the standard OH-58 aircraft exhaust stacks and with the ejector-type IR suppressors in order to make a valid comparison. Repeatability of the test results for the two configurations was verified by rerunning the conditions over a period of days. Test results showed no measurable difference in performance between the standard exhaust stacks and the IR suppressors.

  19. Shelf life extension of minimally processed cabbage and cucumber through gamma irradiation.

    Science.gov (United States)

    Khattak, Amal Badshah; Bibi, Nizakat; Chaudry, Muhammad Ashraf; Khan, Misal; Khan, Maazullah; Qureshi, Muhammad Jamil

    2005-01-01

    The influence of irradiation of minimally processed cabbage and cucumber on microbial safety, texture, and sensory quality was investigated. Minimally processed, polyethylene-packed, and irradiated cabbage and cucumber were stored at refrigeration temperature (5 degrees C) for 2 weeks. The firmness values ranged from 3.23 kg (control) to 2.82 kg (3.0-kGy irradiated samples) for cucumbers, with a gradual decrease in firmness with increasing radiation dose (0 to 3 kGy). Cucumbers softened just after irradiation with a dose of 3.0 kGy and after 14 days storage, whereas the texture remained within acceptable limits up to a radiation dose of 2.5 kGy. The radiation treatment had no effect on the appearance scores of cabbage; however, scores decreased from 7.0 to 6.7 during storage. The appearance and flavor scores of cucumbers decreased with increasing radiation dose, and overall acceptability was better after radiation doses of 2.5 and 3.0 kGy. The aerobic plate counts per gram for cabbage increased from 3 to 5 log CFU (control), from 1.85 to 2.93 log CFU (2.5 kGy), and from a few colonies to 2.6 log CFU (3.0 kGy) after 14 days of storage at 5 degrees C. A similar trend was noted for cucumber samples. No coliform bacteria were detected at radiation doses greater than 2.0 kGy in either cabbage or cucumber samples. Total fungal counts per gram of sample were within acceptable limits for cucumbers irradiated at 3.0 kGy, and for cabbage no fungi were detected after 2.0-kGy irradiation. The D-values for Escherichia coli in cucumber and cabbage were 0.19 and 0.17 kGy, and those for Salmonella Paratyphi A were 0.25 and 0.29 kGy for cucumber and cabbage, respectively.

  20. Suitability of Zucchini and Cucumber Genotypes to Populations of Meloidogyne arenaria, M. incognita, and M. javanica.

    Science.gov (United States)

    López-Gómez, Manuel; Flor-Peregrín, Elena; Talavera, Miguel; Verdejo-Lucas, Soledad

    2015-03-01

    The host suitability of five zucchini and three cucumber genotypes to Meloidogyne incognita (MiPM26) and M. javanica (Mj05) was determined in pot experiments in a greenhouse. The number of egg masses (EM) did not differ among the genotypes of zucchini or cucumber, but the eggs/plant and reproduction factor (Rf) did slightly. M. incognita MiPM26 showed lower EM, eggs/plant, and Rf than M. javanica Mj05. Examination of the zucchini galls for nematode postinfection development revealed unsuitable conditions for M. incognita MiPM26 as only 22% of the females produced EM compared to 95% of the M. javanica females. As far as cucumber was concerned, 86% of the M. incognita and 99% of the M. javanica females produced EM, respectively. In a second type of experiments, several populations of M. arenaria, M. incognita, and M. javanica were tested on zucchini cv. Amalthee and cucumber cv. Dasher II to assess the parasitic variation among species and populations of Meloidogyne. A greater parasitic variation was observed in zucchini than cucumber. Zucchini responded as a poor host for M. incognita MiPM26, MiAL09, and MiAL48, but as a good host for MiAL10 and MiAL15. Intraspecific variation was not observed among the M. javanica or M. arenaria populations. Cucumber was a good host for all the tested populations. Overall, both cucurbits were suitable hosts for Meloidogyne but zucchini was a poorer host than the cucumber.

  1. Occurrence, characterization and management of fruit rot of immature cucumber fruits under arid greenhouse conditions

    Directory of Open Access Journals (Sweden)

    ABDULLAH M AL-SADI

    2012-01-01

    Full Text Available A study was undertaken to characterize and manage pathogens associated with fruit rot of immature cucumber fruits in greenhouses in Oman. A survey over 5 growing seasons from 2008 to 2010 in 99 different greenhouses in Oman showed that the disease is prevalent in 91 (92% greenhouses and results in losses of 10 to 60% (avg. 33% of immature fruits per plant. Incidence of the disease was not found to be affected by growing seasons, which could be attributed to the limited fluctuations in ambient temperatures in greenhouses. Isolations from diseased cucumber fruits yielded Alternaria alternata (isolation frequency = 52%, Fusarium equiseti (40%, Cladosporium tenuissium (27%, Botrytis cinerea (6%, Fusarium solani (6%, Corynespora cassiicola (3%, Aspergillus spp. (2%, Curvularia sp. (1% and Bipolaris sp. (1%. With the exception of Curvularia and Bipolaris species, all other fungi were pathogenic on cucumber fruits, with Fusarium equiseti being the most aggressive, followed by Corynespora cassiicola, Botrytis cinerea and Alternaria alternata. Cladosporium and Aspergillus spp. were found to be weakly pathogenic. Comparing the efficacy of foliar and soil applications of carbendazim fungicide on fruit rot of cucumber showed that foliar applications significantly reduced fruit rot and increased cucumber yield when compared to soil application or to control (P < 0.01. This appears to be the first report of the association of Corynespora cassiicola and Fusarium equiseti with fruit rot of immature greenhouse cucumbers. This is also the first report in Oman for the association of Cladosporium tenuissimum with fruit rot of immature cucumbers. Findings are discussed in terms of factors affecting disease control in greenhouses using carbendazim.

  2. Uterine leiomyomas/fibroids are the most common pelvic tumors of the female genital tract. Transforming growth factor beta (TGF β family members are multi-functional cytokines that play a key role in cellular growth, proliferation and differentiation. The aim of this study was to investigate whether TGF β1 - 509 C/T polymorphism could be used as a susceptibility marker in Uterine fibroids pathogenesis. ARMS PCR was carried out for controls and patients (n=103 to identify the specific genotypes. Genotypes and allelic frequencies in both groups were compared. Proportions of C homozygote, heterozygote and T homozygote for TGF β1gene polymorphisms were 37.9%, 44.7%, 17.5% in the control individuals and 37%, 51.5%, 11.7% in the uterine fibroid patients. There was no significant difference between the controls and the patients thus indicating the tumor suppressor effect of TGF β1 in the early stages of tumor pathogenesis. The study was found to be in association with the earlier reported data wherein TGF β1 acts as tumor suppressor in the early stages and as a tumor promoter in the later stages of tumor pathogenesis

    Directory of Open Access Journals (Sweden)

    M.Veronica

    2013-06-01

    Full Text Available Uterine leiomyomas/fibroids are the most common pelvic tumors of the female genital tract. Transforming growth factor beta (TGF β family members are multi-functional cytokines that play a key role in cellular growth, proliferation and differentiation. The aim of this study was to investigate whether TGF β1 - 509 C/T polymorphism could be used as a susceptibility marker in Uterine fibroids pathogenesis. ARMS PCR was carried out for controls and patients (n=103 to identify the specific genotypes. Genotypes and allelic frequencies in both groups were compared. Proportions of C homozygote, heterozygote and T homozygote for TGF β1gene polymorphisms were 37.9%, 44.7%, 17.5% in the control individuals and 37%, 51.5%, 11.7% in the uterine fibroid patients. There was no significant difference between the controls and the patients thus indicating the tumor suppressor effect of TGF β1 in the early stages of tumor pathogenesis. The study was found to be in association with the earlier reported data wherein TGF β1 acts as tumor suppressor in the early stages and as a tumor promoter in the later stages of tumor pathogenesis

  3. Connection Cryostats for LHC Dispersion Suppressors

    CERN Document Server

    Marque, S; Genet, M; Skoczen, B

    2004-01-01

    The lattice of the Large Hadron Collider (LHC) being built at CERN is based on 8 standard arcs of 2.5 km length. Each arc is bounded on either side by Dispersion Suppressors connected to the arc by connection cryostats providing 15m long drift spaces. As for a dipole magnet, the connection cryostat provides a continuity of beam and insulation vacuum, electrical powering, cryogenic circuits, thermal and radiation shielding. In total 16 modules will be constructed. The stringent functional specification has led to various design options. Among them, a light mechanical structure has been developed with a stiffness comparable to that of a dipole magnet, for alignment purpose. Thermal studies, including lambda front propagation, have been performed to ensure a cooling down time to 1.9 K within the time budget. A special cooling scheme around the beam tubes has been chosen to cope with heat loads produced during operation. We report on the general design of these modules and on the adopted manufacturing process whi...

  4. The tumor suppressor CDKN3 controls mitosis.

    Science.gov (United States)

    Nalepa, Grzegorz; Barnholtz-Sloan, Jill; Enzor, Rikki; Dey, Dilip; He, Ying; Gehlhausen, Jeff R; Lehmann, Amalia S; Park, Su-Jung; Yang, Yanzhu; Yang, Xianlin; Chen, Shi; Guan, Xiaowei; Chen, Yanwen; Renbarger, Jamie; Yang, Feng-Chun; Parada, Luis F; Clapp, Wade

    2013-06-24

    Mitosis is controlled by a network of kinases and phosphatases. We screened a library of small interfering RNAs against a genome-wide set of phosphatases to comprehensively evaluate the role of human phosphatases in mitosis. We found four candidate spindle checkpoint phosphatases, including the tumor suppressor CDKN3. We show that CDKN3 is essential for normal mitosis and G1/S transition. We demonstrate that subcellular localization of CDKN3 changes throughout the cell cycle. We show that CDKN3 dephosphorylates threonine-161 of CDC2 during mitotic exit and we visualize CDC2(pThr-161) at kinetochores and centrosomes in early mitosis. We performed a phosphokinome-wide mass spectrometry screen to find effectors of the CDKN3-CDC2 signaling axis. We found that one of the identified downstream phosphotargets, CKβ phosphorylated at serine 209, localizes to mitotic centrosomes and controls the spindle checkpoint. Finally, we show that CDKN3 protein is down-regulated in brain tumors. Our findings indicate that CDKN3 controls mitosis through the CDC2 signaling axis. These results have implications for targeted anticancer therapeutics.

  5. Fitness Trade-Offs Lead to Suppressor Tolerance in Yeast.

    Science.gov (United States)

    Hou, Jing; Schacherer, Joseph

    2017-01-01

    Genetic variation among individuals within a population provides the raw material for phenotypic diversity upon which natural selection operates. Some given variants can act on multiple standing genomic variations simultaneously and release previously inaccessible phenotypes, leading to increased adaptive potential upon challenging environments. Previously, we identified such a variant related to a tRNA nonsense suppressor in yeast. When introduced into other genetic backgrounds, the suppressor led to an increased population phenotypic variance on various culture conditions, conferring background and environment specific selective advantages. Nonetheless, most isolates are intolerant to the suppressor on rich media due to a severe fitness cost. Here, we found that the tolerance to suppressor is related to a surprising level of fitness outburst, showing a trade-off effect to accommodate the cost of carrying the suppressor. To dissect the genetic basis of such trade-offs, we crossed strains with contrasting tolerance levels on rich media, and analyzed the fitness distribution patterns in the offspring. Combining quantitative tetrad analysis and bulk segregant analysis, we identified two genes, namely MKT1 and RGA1, involved in suppressor tolerance. We showed that alleles from the tolerant parent for both genes conferred a significant gain of fitness, which increased the suppressor tolerance. Our results present a detailed dissection of suppressor tolerance in yeast and provide insights into the molecular basis of trade-offs between fitness and evolutionary potential. © The Author 2016. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  6. Potential involvement of a cucumber homolog of phloem protein 1 in the long-distance movement of Cucumber mosaic virus particles.

    Science.gov (United States)

    Requena, A; Simón-Buela, L; Salcedo, G; García-Arenal, F

    2006-07-01

    The systemic movement of Cucumber mosaic virus (CMV) in cucumber plants was analyzed. The structure that is translocated and its putative interactions with phloem components were analyzed in phloem exudate (PE) samples, which reflect sieve tubes stream composition. Rate zonal centrifugation and electron-microscopy analyses of PE from CMV-infected plants showed that CMV moves through sieve tubes as virus particles. Gel overlay assays revealed that CMV particles interact with a PE protein, p48. The amino-acid sequence of several tryptic peptides of p48 was determined. Partial amino-acid sequence of p48 showed it was a cucumber homolog of phloem protein 1 (PP1) from pumpkin, with which p48 also shares several chemical properties. PP1 from pumpkin has plasmodesmata-gating ability and translocates in sieve tubes. Encapsidated CMV RNA in PE samples from infected plants was less accessible to digestion by RNase A than RNA in purified CMV particles, a property that was reconstituted by the in vitro interaction of purified CMV particles and protein p48. These results indicate that the interaction with p48 modifies CMV particle structure and suggest that CMV particles interact with the cucumber homolog of PP1 during translocation in the sieve tubes.

  7. High-Throughput Sequencing Identifies Novel and Conserved Cucumber (Cucumis sativus L.) microRNAs in Response to Cucumber Green Mottle Mosaic Virus Infection.

    Science.gov (United States)

    Liu, H W; Luo, L X; Liang, C Q; Jiang, N; Liu, P F; Li, J Q

    2015-01-01

    Seedlings of Cucumis sativus L. (cv. 'Zhongnong 16') were artificially inoculated with Cucumber green mottle mosaic virus (CGMMV) at the three-true-leaf stage. Leaf and flower samples were collected at different time points post-inoculation (10, 30 and 50 d), and processed by high throughput sequencing analysis to identify candidate miRNA sequences. Bioinformatic analysis using screening criteria, and secondary structure prediction, indicated that 8 novel and 23 known miRNAs (including 15 miRNAs described for the first time in vivo) were produced by cucumber plants in response to CGMMV infection. Moreover, gene expression profiles (p-value cucumbers. Gene ontology (GO) analysis revealed that the predicted target genes of these 88 miRNAs, which were screened using the psRNATarget and miRanda algorithms, were involved in three functional categories: 2265 in molecular function, 1362 as cellular components and 276 in biological process. The subsequent Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis revealed that the predicted target genes were frequently involved in metabolic processes (166 pathways) and genetic information processes (40 pathways) and to a lesser degree the biosynthesis of secondary metabolites (12 pathways). These results could provide useful clues to help elucidate host-pathogen interactions in CGMMV and cucumber, as well as for the screening of resistance genes.

  8. Resistance to Cucumber mosaic virus in Gladiolus plants transformed with either a defective replicase of coat protein subgroup II gene from Cucumber mosaic virus

    Science.gov (United States)

    Transgenic Gladiolus plants that contain either Cucumber mosaic virus (CMV) subgroup I coat protein, CMV subgroup II coat protein, CMV replicase, a combination of the CMV subgroups I and II coat proteins, or a combination of the CMV subgroup II coat protein and replicase genes were developed. These...

  9. Response growth using a low-frequency suppressor.

    Science.gov (United States)

    DiGiovanni, Jeffrey J; Nair, Padmaja

    2007-12-01

    Numerous psychophysical studies on two-tone suppression have been carried out. More recently, researchers have attempted to relate the magnitude of suppression to the level of suppressee. [Wojtczak, M., Viemeister, N.F., 2005. Psychophysical response growth under suppression. In: Pressnitzer, D., de Cheveigne, A., McAdams, S., Collet, L. (Eds.), Auditory Signal Processing: Physiology, Psychoaccoustics, and Models. Springer, New York, pp. 67-74] demonstrated that the magnitude of suppression for a higher-frequency, fixed-level suppressor decreases with increasing level of the suppressee. This suggests a linearization of the basilar membrane response in presence of a high-frequency suppressor. The present study expands these results to a low-frequency suppressor of varying intensity levels. Detection of a 10-ms, 4.0-kHz probe was measured under different forward-masking conditions: one with a 200-ms, 4.0-kHz masker (suppressee) presented with no suppressor and another with the same masker paired with a 2.2-kHz, 200-ms suppressor. The 4.0-kHz masker level was varied adaptively and a range of probe levels was used to measure the growth of suppression. Results indicate that (1) the magnitude of suppression increases with increasing suppressor level and (2) generally, the probe level was not related to the magnitude of suppression.

  10. Tumor suppressors status in cancer cell line Encyclopedia.

    Science.gov (United States)

    Sonkin, Dmitriy; Hassan, Mehedi; Murphy, Denis J; Tatarinova, Tatiana V

    2013-08-01

    Tumor suppressors play a major role in the etiology of human cancer, and typically achieve a tumor-promoting effect upon complete functional inactivation. Bi-allelic inactivation of tumor suppressors may occur through genetic mechanisms (such as loss of function mutation, copy number (CN) loss, or loss of heterozygosity (LOH)), epigenetic mechanisms (such as promoter methylation or histone modification), or a combination of the two. We report systematically derived status of 69 known or putative tumor suppressors, across 799 samples of the Cancer Cell Line Encyclopedia. In order to generate such resource we constructed a novel comprehensive computational framework for the assessment of tumor suppressor functional "status". This approach utilizes several orthogonal genomic data types, including mutation data, copy number, LOH and expression. Through correlation with additional data types (compound sensitivity and gene set activity) we show that this integrative method provides a more accurate assessment of tumor suppressor status than can be inferred by expression, copy number, or mutation alone. This approach has the potential for a more realistic assessment of tumor suppressor genes for both basic and translational oncology research.

  11. Soil preparation and nutrient losses by erosion in the culture cucumber

    Directory of Open Access Journals (Sweden)

    Amaral Sobrinho Nelson Moura Brasil do

    2005-01-01

    Full Text Available Minimum tillage reportedly reduce erosion, avoid soil degradation and improve crop productivity. This study aimed to determine how tillage operations may affect either nutrient accumulation or nutrient losses by erosion. The study was, carried out from December, 2000 to March, 2001, in the watershed of the Caetés River, in Rio de Janeiro State, Brazil (22º25'43"S, 43º25'07"W. The experiment was set up in sandy clay Kandiudult soil, 60% slope, under cucumber (Cucumis sativus L. crop. Soil samples were collected before planting and after harvest, on 22.0 X 4.0 m Greeoff plots. After each rainfall, fine sediments carried by runoff were deposited into two collecting tanks in a row, installed at the end of each plot, and were later dried, weighed and stored for analyses. Treatments (n = 4 were characterized by different tillage systems: (i downhill plowing followed by the burning of crop residues (DPB; (ii downhill plowing with no burning of the crop residues (DPNB; (iii animal traction contour plowing, with strips of guinea grass planted at a spacing of 7.0 m (AT; and (iv minimum tillage (MT. Samples of the soil-plowed layer were collected before planting and after harvest, between the rows and from the plants. Total concentration of Ca, Mg, K and P were determined after extraction with nitric perchloride digestion. Labile P and exchangeable K were extracted with the Mehlich 1 extractant solution. The MT system reduced losses of both exchangeable bases (15% and P (8%, and affected the distribution of labile and organic P. Crop residues left on soil surface in the MT system, resulted in increased organic matter content. Downhill plowing, the most used tillage operation in the region, resulted in the greatest losses of Ca, Mg, K, and P.

  12. Sun-beams, cucumbers, and purple bacteria : Historical milestones in early studies of photosynthesis revisited.

    Science.gov (United States)

    Gest, H

    1988-10-01

    Discovery of the general outlines of plant and bacterial photosyntheses required the efforts of a large number of gifted scientists over the course of two centuries. The first to suggest that sunlight might affect plants in some way other than through conversion of light to heat was Stephen Hales, in 1725, and this notion was promptly satirized by Jonathan Swift in his description of the "cucumber project" inGulliver's Travels (1726). Considerably later, in 1772, Joseph Priestley reported the first experiments showing the production of "dephlogisticated air" (oxygen gas) by plants, and the interdependence of animal and plant life mediated by gases. Priestley and others, however, had difficulty repeating these experiments, mainly because they were unaware of the requirement for light in photosynthesis. The latter was clearly demonstrated in 1779 by Jan Ingen-Housz, who also determined that leaves were the primary sites of the photosynthetic production of oxygen by plants. When purple bacteria were first studied in the late 19th century by Theodor Engelmann, light-dependent O2 formation could not be detected. Contradictory observations in this connection were reported for a number of decades, but eventually the absence of O2 production in photosynthesis by purple bacteria was conclusively established. Attempts to explain why the bacteria do not evolve O2 led Cornelis van Niel to propose a "unified, comparative biochemical" explanation of photosynthetic processes that was widely accepted. This hypothesis, however, was abandoned soon after photophosphorylation by membranes from purple bacteria and plant chloroplasts was discovered in 1954. Unexpectedly, rapid progress in molecular biological and genetic studies of the membrane-bound reaction centers of purple bacteria indicate that current investigations are on the verge of revealing the detailed mechanisms by which energy conversion occurs in the reaction centers of all photosynthetic organisms.

  13. Syntenic relationships between cucumber (Cucumis sativus L.) and melon (C. melo L.) chromosomes as revealed by comparative genetic mapping

    Science.gov (United States)

    Cucumber and melon are two economically important vegetable species. Both species have an Asian origin that diverged approximately nine million years ago. Cucumber is believed to have evolved from melon, where twelve melon chromosomes are thought to have undergone chromosome fusion to result in the ...

  14. Persistence and protection of mitochondrial DNA in the generative cell of cucumber is consistent with its paternal transmission

    Science.gov (United States)

    Cucumber, unlike most plants, shows paternal inheritance of its mitochondrial DNA (mtDNA); however, the mechanisms regulating this unique transmission mode are unclear. Here we monitored the amounts of mtDNA through the development of cucumber microspores to pollen and observed that mtDNA decreases ...

  15. Combined transcript and metabolite analysis reveals genes involved in spider mite induced volatile formation in cucumber plants

    NARCIS (Netherlands)

    Mercke, P.; Kappers, I.F.; Verstappen, F.W.A.; Vorst, O.F.J.; Dicke, M.; Bouwmeester, H.J.

    2004-01-01

    Many plants have an indirect defense against herbivores by emitting volatiles that attract carnivorous enemies of the herbivores. In cucumber (Cucumis sativus) the production of carnivore attractants can be induced by herbivory or jasmonic acid spraying. From the leaves of cucumber plants with and

  16. Studies on biological control of powdery mildew in cucumber (Sphaerotheca fuliginea) and rose (Sphaerotheca pannosa) by means of mycoparasites.

    NARCIS (Netherlands)

    Verhaar, M.A.

    1998-01-01

    Powdery mildew on rose ( Sphaerotheca pannosa ) and cucumber ( Sphaerotheca fuliginea ) are two serious diseases in glasshouses. Intensive control by fungicides is needed. The research presented here deals with biocontrol of powdery mildew on cucumber and rose by means of mycoparasites.The mycoparas

  17. Metabolism of lactic acid in fermented cucumbers by Lactobacillus buchneri and related species, potential spoilage organisms in reduced salt fermentations

    Science.gov (United States)

    Recent evidence suggests that Lactobacillus buchneri may play an important role in spoilage-associated secondary fermentation of cucumbers. Lactic acid degradation during fermented cucumber spoilage is influenced by sodium chloride (NaCl) concentration, pH, and presence of oxygen. Objectives were to...

  18. A method of genotyping by pedigree-based training-set for identification of QTLs associated with cucumber fruit size

    Science.gov (United States)

    Large sets of genomic data are becoming available for cucumber (Cucumis sativus), yet there is no tool for whole genome genotyping. Creation of saturated genetic maps depends on development of good markers. The present cucumber genetic maps are based on several hundreds of markers. However they are ...

  19. Genome-wide characterization of simple sequence repeats in cucumber (Cucumis sativus L.

    Directory of Open Access Journals (Sweden)

    Simon Philipp W

    2010-10-01

    Full Text Available Abstract Background Cucumber, Cucumis sativus L. is an important vegetable crop worldwide. Until very recently, cucumber genetic and genomic resources, especially molecular markers, have been very limited, impeding progress of cucumber breeding efforts. Microsatellites are short tandemly repeated DNA sequences, which are frequently favored as genetic markers due to their high level of polymorphism and codominant inheritance. Data from previously characterized genomes has shown that these repeats vary in frequency, motif sequence, and genomic location across taxa. During the last year, the genomes of two cucumber genotypes were sequenced including the Chinese fresh market type inbred line '9930' and the North American pickling type inbred line 'Gy14'. These sequences provide a powerful tool for developing markers in a large scale. In this study, we surveyed and characterized the distribution and frequency of perfect microsatellites in 203 Mbp assembled Gy14 DNA sequences, representing 55% of its nuclear genome, and in cucumber EST sequences. Similar analyses were performed in genomic and EST data from seven other plant species, and the results were compared with those of cucumber. Results A total of 112,073 perfect repeats were detected in the Gy14 cucumber genome sequence, accounting for 0.9% of the assembled Gy14 genome, with an overall density of 551.9 SSRs/Mbp. While tetranucleotides were the most frequent microsatellites in genomic DNA sequence, dinucleotide repeats, which had more repeat units than any other SSR type, had the highest cumulative sequence length. Coding regions (ESTs of the cucumber genome had fewer microsatellites compared to its genomic sequence, with trinucleotides predominating in EST sequences. AAG was the most frequent repeat in cucumber ESTs. Overall, AT-rich motifs prevailed in both genomic and EST data. Compared to the other species examined, cucumber genomic sequence had the highest density of SSRs (although

  20. Effect of shrink wrap packaging for maintaining quality of cucumber during storage.

    Science.gov (United States)

    Dhall, Rajinder Kumar; Sharma, Sanjeev R; Mahajan, B V C

    2012-08-01

    Immature green cucumber cv. 'Padmini' fruits were individually shrink wrapped with Cryovac D955 (60 guage) film and stored at 12 ± 1 °C, 90-95% RH as well as ambient conditions (29-33 °C, 65-70% RH). At 12 ± 1 °C and 90-95% RH, individual shrink wrapped cucumber recorded minimum Physiological loss in weight (0.66%) as compared with unwrapped fruits (11.11%) at the end of refrigerated storage (15 days). The softening (loss of firmness) was maximum (1304.6-876.6 g force) in unwrapped cucumbers whereas in shrink wrapping, minimum loss in firmness (1304.6-1065.3 g force) was observed after 12 days storage at 12 ± 1 °C and 90-95% RH but greater loss of weight and firmness makes the control cucumbers unmarketable after 9 days of storage. There were no rotting at all both in shrink wrapped and unwrapped cucumbers upto 15 days of storage at 12 ± 1 °C and 90-95% RH. After 15 days storage of shrink wrapped cucumbers at 12 ± 1 °C and 90-95% RH, there was loss of green colour and development of yellowness and decay. The sensory attributes score was highest in shrink wrapped cucumbers as compared to unwrapped cucumbers at end of both storage conditions. Thus it can be concluded that individual shrink wrapped cucumber can be stored well upto 15 days at 12 ± 1 °C and 90-95% RH and for 5 days at ambient conditions (29-33 °C, 65-70% RH) with maximum retention of green colour, no spoilage, minimum weight and firmness loss and very good sensory quality attributes whereas, unwrapped fruits can be stored well upto 9 days at 12 ± 1 °C and 90-95% RH and for 2 days at ambient conditions with maximum retention of physico-chemical quality attributes.

  1. Effects of Grafting on Root Exudates of Cucumber and Rhizosphere Environment under Copper Stress

    Institute of Scientific and Technical Information of China (English)

    Hua LI; Hongjun HE; Tengfei LI; Xin LI; Zikun ZHANG

    2013-01-01

    [Objective] This study to aimed to investigate the effects of Cu stress on root exudates and microbial activities in rhizosphere of grafted and ungrafted cucum-ber seedlings, and therefore to elucidate the microbial mechanism of grafting for in-creasing cucumber plants tolerance to Cu stress [Method] Four treatments: (1) un-grafted seedlings + test soil (U0); (2) ungrafted seedlings + test soil + CuSO4·5H2O (U1); (3) grafted seedlings + test soil (G0); (4) grafted seedlings + test soil + Cu-SO4·5H2O (G1) were set in the pot culture experiment. The contents of free amino acids, organic acids, phenolic acid and sugars, microbial population and enzyme ac-tivity in the four treatment were measured, respectively. [Result] The secretion of amino acids and organic acids were increased under Cu stress. The amino acids secretions of grafted seedlings roots were obviously higher than ungrafted seedlings except for Phe and Val. At the same time, the secretion of oxalic acid, malic acid, acetic acid, citric acid, cinnamic acid, ρ-hydroxybenzoic acid and benzoic acid of grafted seedlings were significantly higher than ungrafted seedlings as wel . There-fore, more Cu2+ were restricted in soil by chelating, complexing and precipitation with root exudates, and its toxicity was decreased. The soil microbial biomass C and N in grafted cucumber rhizosphere were significantly higher than those in ungrafted cu-cumber rhizosphere, whereas basal respiration and metabolic quotient were signifi-cantly lower. Under Cu stress, the numbers of actinomyces and nitrogen fixing bac-teria decreased and the number of fungi increased significantly, whereas there was no significant difference in amounts of bacteria. The numbers of bacteria, actino-myces, and nitrogen fixing bacteria in grafted cucumber rhizosphere were significant-ly higher than those in ungrafted cucumber rhizosphere, but the number of fungi was opposite. The activities of soil urease, phosphatase, sucrase and catalase in grafted

  2. A single amino acid at N-terminal region of the 2b protein of cucumber mosaic virus strain m1 has a pivotal role in virus attenuation.

    Science.gov (United States)

    Maneechoat, Phoowanarth; Takeshita, Minoru; Uenoyama, Misa; Nakatsukasa, Maki; Kuroda, Atsuko; Furuya, Naruto; Tsuchiya, Kenichi

    2015-02-02

    Host responses to infection by a mild strain of cucumber mosaic virus, termed CMV-m1, were re-examined in several plant species in comparison with those by a severe strain CMV-Y. Mild systemic symptoms were developed on the six plant species inoculated with CMV-m1. Virus titer in the Nicotiana benthamiana plants infected with CMV-m1 was significantly lower than those infected with CMV-Y, although infection by CMV-m1 interfered with further infection by CMV-Y in the plants. Subsequently, the attenuated virulence of CMV-m1 was analyzed by reassortment and recombination analyses between CMV-m1 and CMV-Y RNAs. The results suggested that the 2b protein of CMV-m1 (m1-2b) is involved in the formation of mild symptoms in N. benthamiana. Furthermore, site-directed mutagenesis demonstrated that Thr18 of m1-2b is responsible for formation of mild symptoms. Local RNA silencing suppressor activity of m1-2b was a little lower than that of severe strain CMV-Y. We discuss the relationship between attenuation of CMV-m1 and the features of m1-2b.

  3. Identification of the subgenomic promoter of the coat protein gene of cucumber fruit mottle mosaic virus and development of a heterologous expression vector.

    Science.gov (United States)

    Rhee, Sun-Ju; Jang, Yoon Jeong; Lee, Gung Pyo

    2016-06-01

    Heterologous gene expression using plant virus vectors enables research on host-virus interactions and the production of useful proteins, but the host range of plant viruses limits the practical applications of such vectors. Here, we aimed to develop a viral vector based on cucumber fruit mottle mosaic virus (CFMMV), a member of the genus Tobamovirus, whose members infect cucurbits. The subgenomic promoter (SGP) in the coat protein (CP) gene, which was used to drive heterologous expression, was mapped by analyzing deletion mutants from a CaMV 35S promoter-driven infectious CFMMV clone. The region from nucleotides (nt) -55 to +160 relative to the start codon of the open reading frame (ORF) of CP was found to be a fully active promoter, and the region from nt -55 to +100 was identified as the active core promoter. Based on these SGPs, we constructed a cloning site in the CFMMV vector and successfully expressed enhanced green fluorescent protein (EGFP) in Nicotiana benthamiana and watermelon (Citrullus lanatus). Co-inoculation with the P19 suppressor increased EGFP expression and viral replication by blocking degradation of the viral genome. Our CFMMV vector will be useful as an expression vector in cucurbits.

  4. Modification of the cellular heat sensitivity of cucumber by growth under supplemental ultraviolet-B radiation

    Energy Technology Data Exchange (ETDEWEB)

    Caldwell, C.R. [Department of Agriculture, Beltsville, MD (United States)

    1994-02-01

    The effect of ultraviolet B (UV-B) radiation on the thermal sensitivity of cucumber (Cucumis sativus L.) was studied using UV-B-sensitive cv Poinsett 76 and UV-B-resistant cv Ashley grown under control and elevated (300 mW m{sup -2}) UV-B radiation levels. Using both cotyledon and leaf discs, the ability of the tissue to reduce triphenyl tetrazolium chloride (TTC) was determined after treatment at 50{degrees}C for various times. Semilogarithmic plots of TTC reduction as a function of time at 50{degrees}were curvilinear. They were monophasic for the control cucumber and biphasic for cucumber grown in the presence of elevated UV-B. Treatment of cucumber plants at 37{degrees}C for 24 h or of tissue discs at acute UV-B levels for 1 h further modified their response to elevated temperature. These results suggest that growth of cucumber under enhanced UV-B radiation levels increased its ability to withstand elevated temperatures. 19 refs., 2 figs., 2 tabs.

  5. Genome-wide identification and phylogenetic analysis of the ERF gene family in cucumbers

    Directory of Open Access Journals (Sweden)

    Lifang Hu

    2011-01-01

    Full Text Available Members of the ERF transcription-factor family participate in a number of biological processes, viz., responses to hormones, adaptation to biotic and abiotic stress, metabolism regulation, beneficial symbiotic interactions, cell differentiation and developmental processes. So far, no tissue-expression profile of any cucumber ERF protein has been reported in detail. Recent completion of the cucumber full-genome sequence has come to facilitate, not only genome-wide analysis of ERF family members in cucumbers themselves, but also a comparative analysis with those in Arabidopsis and rice. In this study, 103 hypothetical ERF family genes in the cucumber genome were identified, phylogenetic analysis indicating their classification into 10 groups, designated I to X. Motif analysis further indicated that most of the conserved motifs outside the AP2/ERF domain, are selectively distributed among the specific clades in the phylogenetic tree. From chromosomal localization and genome distribution analysis, it appears that tandem-duplication may have contributed to CsERF gene expansion. Intron/exon structure analysis indicated that a few CsERFs still conserved the former intron-position patterns existent in the common ancestor of monocots and eudicots. Expression analysis revealed the widespread distribution of the cucumber ERF gene family within plant tissues, thereby implying the probability of their performing various roles therein. Furthermore, members of some groups presented mutually similar expression patterns that might be related to their phylogenetic groups.

  6. Effects of Different Preceding Crops on Soil Micro-ecological Environment and Yield of Cucumber

    Institute of Scientific and Technical Information of China (English)

    LIU Shouwei; LIU Shuqin; PAN Kai; WANG Lili; WU Fengzhi

    2011-01-01

    Pepper, celery, eggplant and tomato were used as preceding crops to study their effects on the yield, soil microorganism quantity and soil enzyme activities of cucumber. Results showed that four preceding crops all increased soil microorganism quantity in cucumber, but decreased population of Fusarium oxysporum. The effect of pepper was more significant than that of the others Populations of soil bacteria, fungi and actinomyces of pepper treatment were significantly higher than those of the other treatments, except that the populations of fungi had no significant difference with celery and eggplant treatments on 50 days after transplanting, while that of Fusarium oxysporum was fewer than that of the other treatments. The soil microorganism quantity in celery and eggplant treatment was more significant than tomato, but lower population of Fusarium oxysporum. Four preceding crops all increased sol enzyme activities, lnvertase and urease activities of pepper treatment were significantly higher than those of the other treatments, catalase activities of pepper, celery and eggplant treatments were significantly higher than those of tomato and the control treatments All preceding crops remarkably increased cucumber yield, with pepper as the highest. Comparing with the control, cucumber yields of pepper, celery and eggplant treatments increased by 24.9%, 13.6% and 11.9%, respectively. Results suggested that four preceding crops all improved soil microbial ecology and increased cucumber yield. The pepper was the most suitable preceding crop, then followed by celery and eggplant. Tomato had the similar effect as the control.

  7. Identification and characterisation of Dof transcription factors in the cucumber genome.

    Science.gov (United States)

    Wen, Chang-Long; Cheng, Qing; Zhao, Liqun; Mao, Aijun; Yang, Jingjing; Yu, Shuancang; Weng, Yiqun; Xu, Yong

    2016-03-16

    Cucumber is vulnerable to many foliage diseases. Recent studies reported cloning of candidate genes for several diseases in cucumber; however, the exact defence mechanisms remain unclear. Dof genes have been shown to play significant roles in plant growth, development, and responses to biotic and abiotic stresses. Dof genes coding for plant-specific transcription factors can promote large-scale expression of defence-related genes at whole genome level. The genes in the family have been identified and characterized in several plant species, but not in cucumber. In the present study, we identified 36 CsDof members from the cucumber draft genomes which could be classified into eight groups. The proportions of the CsDof family genes, duplication events, chromosomal locations, cis-elements and miRNA target sites were comprehensively investigated. Consequently, we analysed the expression patterns of CsDof genes in specific tissues and their response to two biotic stresses (watermelon mosaic virus and downy mildew). These results indicated that CsDof may be involved in resistance to biotic stresses in cucumber.

  8. Nitrate Protects Cucumber Plants Against Fusarium oxysporum by Regulating Citrate Exudation.

    Science.gov (United States)

    Wang, Min; Sun, Yuming; Gu, Zechen; Wang, Ruirui; Sun, Guomei; Zhu, Chen; Guo, Shiwei; Shen, Qirong

    2016-09-01

    Fusarium wilt causes severe yield losses in cash crops. Nitrogen plays a critical role in the management of plant disease; however, the regulating mechanism is poorly understood. Using biochemical, physiological, bioinformatic and transcriptome approaches, we analyzed how nitrogen forms regulate the interactions between cucumber plants and Fusarium oxysporum f. sp. cucumerinum (FOC). Nitrate significantly suppressed Fusarium wilt compared with ammonium in both pot and hydroponic experiments. Fewer FOC colonized the roots and stems under nitrate compared with ammonium supply. Cucumber grown with nitrate accumulated less fusaric acid (FA) after FOC infection and exhibited increased tolerance to chemical FA by decreasing FA absorption and transportation in shoots. A lower citrate concentration was observed in nitrate-grown cucumbers, which was associated with lower MATE (multidrug and toxin compound extrusion) family gene and citrate synthase (CS) gene expression, as well as lower CS activity. Citrate enhanced FOC spore germination and infection, and increased disease incidence and the FOC population in ammonium-treated plants. Our study provides evidence that nitrate protects cucumber plants against F. oxysporum by decreasing root citrate exudation and FOC infection. Citrate exudation is essential for regulating disease development of Fusarium wilt in cucumber plants. © The Author 2016. Published by Oxford University Press on behalf of Japanese Society of Plant Physiologists. All rights reserved. For permissions, please email: journals.permissions@oup.com.

  9. Effect of mycorrhizas application on plant growth and nutrient uptake in cucumber production under field conditions

    Energy Technology Data Exchange (ETDEWEB)

    Ortas, I.

    2010-07-01

    Mycorrhizas application in horticultural production in the Eastern Mediterranean region of Turkey has been studied under field conditions for several years. The effects of different arbuscular mycorrhizal fungi (AMF) have been evaluated under field conditions for cucumber production. The parameters measured were seedling survival, plant growth and yield, and root colonization. In 1998 and 1999, Glomus mosseae and Glomus etunicatum inoculated cucumber seedlings were treated with and without P (100 kg P2O5 ha-1) application. A second experiment was set up to evaluate the response of cucumber to the inoculation with a consortia of indigenous mycorrhizae, G. mosseae, G. etunicatum, Glomus clarum, Glomus caledonium and a mixture of these four species. Inoculated and control non inoculated cucumber seedlings were established under field conditions in 1998, 2001, 2002 and 2004. Seedling quality, seedling survival under field conditions and yield response to mycorrhiza were tested. Fruits were harvested periodically; at blossom, plant leaves and root samples were taken for nutrient content and mycorrhizal colonization analysis respectively. The field experiment results showed that mycorrhiza inoculation significantly increased cucumber seedling survival, fruit yield, P and Zn shoot concentrations. Indigenous mycorrhiza inoculum was successful in colonizing plant roots and resulted in better plant growth and yield. The relative effectiveness of each of the inocula tested was not consistent in the different experiments, although inoculated plants always grew better than control no inoculated. The most relevant result for growers was the increased survival of seedlings. (Author) 20 refs.

  10. High-throughput sequencing, characterization and detection of new and conserved cucumber miRNAs.

    Directory of Open Access Journals (Sweden)

    Germán Martínez

    Full Text Available Micro RNAS (miRNAs are a class of endogenous small non coding RNAs involved in the post-transcriptional regulation of gene expression. In plants, a great number of conserved and specific miRNAs, mainly arising from model species, have been identified to date. However less is known about the diversity of these regulatory RNAs in vegetal species with agricultural and/or horticultural importance. Here we report a combined approach of bioinformatics prediction, high-throughput sequencing data and molecular methods to analyze miRNAs populations in cucumber (Cucumis sativus plants. A set of 19 conserved and 6 known but non-conserved miRNA families were found in our cucumber small RNA dataset. We also identified 7 (3 with their miRNA* strand not previously described miRNAs, candidates to be cucumber-specific. To validate their description these new C. sativus miRNAs were detected by northern blot hybridization. Additionally, potential targets for most conserved and new miRNAs were identified in cucumber genome.In summary, in this study we have identified, by first time, conserved, known non-conserved and new miRNAs arising from an agronomically important species such as C. sativus. The detection of this complex population of regulatory small RNAs suggests that similarly to that observe in other plant species, cucumber miRNAs may possibly play an important role in diverse biological and metabolic processes.

  11. Identification and bioinformatics comparison of two novel phosphatases in monoecious and gynoecious cucumber lines

    Science.gov (United States)

    Pawełkowicz, Magdalena E.; Wojcieszek, Michał; Osipowski, Paweł; Krzywkowski, Tomasz; PlÄ der, Wojciech; Przybecki, Zbigniew

    2016-09-01

    Two Arabidopsis thaliana genes from the PP2C family of protein phosphatases (AtABI1 and AtABI2) were used to find orthologous genes in the Cucumis sativus L. cv. Borszczagowski (cucumber) genome. Cucumber has been used as a model plant for sex expression studies because although it has been defined as a monoecious species, numerous genotypes are known to produce only female, only male, or hermaphroditic flowers. We identified two new orthologous genes of AtABI1 and AtABI2 in the cucumber genome and named them CsABI1 and CsABI2. To determine the relationships between the regulation of CsABI1 and CsABI2 and flower morphogenesis in cucumber, we performed various computational analyses to define the structure of the genes, and to predict regulatory elements and protein motifs in their sequences. We also performed an expression analysis to identify differences in the expression levels of CsABI1 and CsABI2 in vegetative and generative tissues (leaf, shoot apex, and flower buds) of monoecious (B10) and gynoecious (2gg) cucumber lines. We found that the expressions of CsABI1 and CsABI2 differed in male and female floral buds, and correlated these findings with the abscisic acid signaling pathways in male and female flowers.

  12. Selection Of Suitable Particle Size And Particle Ratio For Japanese Cucumber Cucumis Sativus L. Plants

    Directory of Open Access Journals (Sweden)

    Galahitigama GAH

    2015-08-01

    Full Text Available This study was conducted to select the best particle size of coco peat for cucumber nurseries as well as best particle ratio for optimum plant growth and development of cucumber. The experiment was carried out in International Foodstuff Company and Faculty of Agriculture University of Ruhuna Sri Lanka during 2015 to 2016. Under experiment one three types of different particle sizes were used namely fine amp88040.5mm T2 medium 3mm-0.5mm T3 and coarse 4mm T4 with normal coco peat T1 as treatments. Complete Randomized Design CRD used as experimental design with five replicates. Germination percentage number of leaves per seedling seedling height in frequent day intervals was taken as growth parameters. Analysis of variance procedure was applied to analyze the data at 5 probability level. The results revealed that medium size particle media sieve size 0.5mm -3mm of coco peat was the best particle size for cucumber nursery practice when considered the physical and chemical properties of medium particles of coco peat. In the experiment of selecting of suitable particle ratio for cucumber plants the compressed mixture of coco peat particles that contain 70 ww unsieved coco peat 20 ww coarse particles and 10 ww coconut husk chips 5 12mm has given best results for growth performances compared to other treatments and cucumber grown in this mixture has shown maximum growth and yield performances.

  13. Growth, Metabolism and Physiological Response of the Sea Cucumber, Apostichopus japonicus Selenka During Periods of Inactivity

    Institute of Scientific and Technical Information of China (English)

    DU Rongbin; ZANG Yuanqi; TIAN Xiangli; DONG Shuanglin

    2013-01-01

    The growth,metabolism and physiological response of the sea cucumber,Apostichopus japonicus,were investigated during periods of inactivity.The body weight,oxygen consumption rate (OCR),activities of acidic phosphatase (ACP),alkaline phosphatase (AKP),catalase (CAT) and superoxide dismutase (SOD),and content of heat shock protein 70 (Hsp70) in the body wall and coelomic fluid of A.japonicus were measured during starvation,experimental aestivation and aestivation.The results showed that the body weight of sea cucumber in the three treatments decreased significantly during the experimental period (P<0.05).The OCR of sea cucumber reduced in starvation and experimental aestivation treatments,but increased gradually in natural aestivation treatment.The activities of ACP and AKP of sea cucumber decreased gradually in all treatments,whereas those of SOD and CAT as well as Hsp70 content decreased in the starvation and experimental aestivation treatments and increased in natural aestivation treatment.The sea cucumber entered a state of aestivation at 24℃.To some extent,the animals in experimental aestivation were different from those in natural aestivation in metabolism and physiological response.These findings suggested that the aestivation mechanism ofA.japonicus is complex and may not be attributed to the elevated temperature only.

  14. [Effects of nutrition medium on cucumber growth and soil microenvironment in greenhouse under continuous cropping].

    Science.gov (United States)

    Wu, Chun-Cheng; Li, Tian-Lai; Cao, Xia; Meng, Si-Da; Zhang, Yong-Yong; Yang, Li-Juan

    2014-05-01

    An experiment of continuous cropping of cucumber in nutrition medium (composted with straw, rural soil and puffed chicken manure) or soil was conducted in greenhouse in order to study the effects of medium type on the cucumber growth and soil microenvironment, respectively. The results showed that the two treatments both displayed different levels of obstacles resulted from continuous cropping. In the same cropping season, the nutrient content, soil invertase and urease activities and B/F (bacteria/fungi) ratio in the nutrition medium were obviously higher but fungi quantity was lower than in the soil medium, suggesting the use of nutrition medium changed the bacterial population structure as to improve the cucumber growth and yield. Under continuous cropping, correlation analysis showed that the bacterial quantity was significantly positively related with plant height and root dry mass, and markedly significantly positive correlation exited between the aboveground dry mass and yield of cucumber. The urease activity was also significantly positively related with the cucumber yield. Compared with the soil medium, the nutrition medium could greatly improve soil microenvironment and alleviate the continuous cropping obstacle.

  15. Difference of Low Temperature and Low Irradiance-Resistance between Figleaf Gourd and Cucumber Seedlings Related to Mineral Elements Uptake

    Institute of Scientific and Technical Information of China (English)

    LI Jian-Yong; GUO Shang-Jing; LI Xin-Guo; MENG Jing-Jinga; HE Qi-Wei

    2009-01-01

    We have repotted that the roots of fig, leaf gourd (Cucurbita ficifolia, as rootstock) could improve the resistance of cucumber seedlings (Cucumis sativus L.cv. Jinyan 4, as scion) to 6 h stress at low temperature and low irradiance [1]. In this experiment, the relationship between the mineral elements uptake and photosynthetic activity of photosystems in figleaf gourd and cucumber seedlings were to be studied during low temperature (8 C) stress under low irradiance (100 μ. mol m-2 s-1 PFD) for 5 days. Compared with control seedlings, the maximal photochemical efficiency of PS2 (Fv/Fm) and the oxidizable P700 (P700+) of both figleaf gourd and cucumber seedlings decreased, and beth Fv/Fm and P700+ were lower in cucumber leaves than in figleaf gourd seedlings at the end of the stress. Superoxide dismutase (SOD) activity was higher in beth leaves and roots of figleaf gourd than in leaves and roots of cucumber at both room temperature and low temperature. However, the product rate of O 2 was lower in figleaf gourd leaves than in cucumber leaves. Upon ex-posure to the stress, the malondialdehyde (MDA) content increased markedly in leaves and roots of figleaf gourd and cucumber seedlings, and it grew faster in cucumber seedlings than that in figleaf gourd seedlings. Under adaptive conditions, some mineral elements (Such as Cu, Zn, Mn and Mg) have different contents in leaves and roots between figleaf gourd seedlings and cucumber seedlings. However, at the end of the stress these elements were accumulated apparently in both leaves and roots of figleaf gourd accompanied by no obvious change in cucumber seedlings.

  16. Effect of NAFTA, EUMFTA and China addition to WTO on the cucumber world market

    Directory of Open Access Journals (Sweden)

    Ramon Guajardo-Quiroga

    2010-07-01

    Full Text Available This study empirically analyzed the potential effects of the complete operation of North American Free Trade Agreement (NAFTA, European Union and Mexico Free Trade Agreement (EUMFTA, and the integration of China to the World Trade Organization (WTO, on the cucumber world market. Special emphasis on the impact on Mexico was presented, from a worldwide perspective. A spatial equilibrium model with endogenous prices was constructed for this purpose. Among the findings are: (1 Mexican producers benefited from the complete implementation of NAFTA and EUMFTA. (2 The incorporation of China as a member of the WTO showed a negligible effect on the commercial flows and prices in the cucumber world market. (3 Mexican cucumber production is highly competitive, in the world market, because it has the lowest supply costs.

  17. Chilling Tolerance of Cucumber During Germination is Related to Expression of Lysine Decarboxylase Gene

    Institute of Scientific and Technical Information of China (English)

    LU Ming-hui; LI Xiao-ming; CHEN Jin-feng; CHEN Long-zheng; QIAN Chun-tao

    2005-01-01

    Using cDNA-AFLP technique, a specific fragment was isolated from cucumber cultivar Changchun mici possessing chilling tolerance induced at low temperature (15℃). This fragment, named cctr 132, could not be induced in the chilling sensitive cucumber cultivar Beijing jietou. After recovering the fragment, sequencing and translating, the results of blastx and blastp in GenBank of NCBI indicated that CCTR132 had 88.37% identities and 100% positives with Oryza sativa putative lysine decarboxylase-like protein respectively, and PGGXGTXXE, the putative conserved domain of lysine decarboxylase family, was detected from CCTR132, suggesting the cucumber chilling tolerance during germination is related to the expression of the lysine decarboxylase gene.

  18. Heavy metals in sea cucumber juveniles from coastal areas of Bohai and Yellow seas, north China.

    Science.gov (United States)

    Jiang, Haifeng; Tang, Shizhan; Qin, Dongli; Chen, Zhongxiang; Wang, Jinlong; Bai, Shuyan; Mou, Zhenbo

    2015-05-01

    The study was undertaken to assess the contents of heavy metals (Cu, Zn, Cr, Pb, Cd, As and Hg) in sea cucumber (Apostichopus japonicus) juveniles from coastal areas of Bohai and Yellow seas in northern China. Sea cucumber juveniles were collected from twenty commercial hatcheries distributed in five coastal cities. The mean concentrations obtained for heavy metals in mg/kg were as follows: Cu (0.179), Zn (2.634), Cr (0.108), Pb (0.065), Cd (0.161), As (0.372), Hg (0.034). All the mean concentrations were below the maximum residual limits set by Chinese legislation, but As in 10 % samples exceeded the safety threshold. Significant differences in contents of Cr, Pb and Hg were found among the five investigated areas. Overall, the heavy metal levels in sea cucumber juveniles were relatively low and more attention should be paid to toxic metals Pb, Cd, As and Hg in future routine monitoring program.

  19. Influence of activated charcoal amendment to contaminated soil on dieldrin and nutrient uptake by cucumbers.

    Science.gov (United States)

    Hilber, Isabel; Wyss, Gabriela S; Mäder, Paul; Bucheli, Thomas D; Meier, Isabel; Vogt, Lea; Schulin, Rainer

    2009-01-01

    Activated charcoal (AC) amendments have been suggested as a promising, cost-effective method to immobilize organic contaminants in soil. We performed pot experiments over two years with cucumber (Cucumis sativus L.) grown in agricultural soil with 0.07 mg kg(-1) of weathered dieldrin and 0, 200, 400, and 800 mg AC per kg soil. Dieldrin fresh weight concentrations in cucumber fruits were significantly reduced from 0.012 to an average of 0.004 mg kg(-1), and total uptake from 2 to 1 microg in the 800 mg kg(-1) AC treatment compared to the untreated soil. The treatment effects differed considerably between the two years, due to different meteorological conditions. AC soil treatments did neither affect the availability of nutrients to the cucumber plants nor their yield (total fruit wet weight per pot). Thus, some important prerequisites for the successful application of AC amendments to immobilize organic pollutants in agricultural soils can be considered fulfilled.

  20. Polymer mobility in cell walls of cucumber hypocotyls

    Science.gov (United States)

    Fenwick, K. M.; Apperley, D. C.; Cosgrove, D. J.; Jarvis, M. C.

    1999-01-01

    Cell walls were prepared from the growing region of cucumber (Cucumis sativus) hypocotyls and examined by solid-state 13C NMR spectroscopy, in both enzymically active and inactivated states. The rigidity of individual polymer segments within the hydrated cell walls was assessed from the proton magnetic relaxation parameter, T2, and from the kinetics of cross-polarisation from 1H to 13C. The microfibrils, including most of the xyloglucan in the cell wall, as well as cellulose, behaved as very rigid solids. A minor xyloglucan fraction, which may correspond to cross-links between microfibrils, shared a lower level of rigidity with some of the pectic galacturonan. Other pectins, including most of the galactan side-chain residues of rhamnogalacturonan I, were much more mobile and behaved in a manner intermediate between the solid and liquid states. The only difference observed between the enzymically active and inactive cell walls, was the loss of a highly mobile, methyl-esterified galacturonan fraction, as the result of pectinesterase activity.

  1. Mössbauer study of iron uptake in cucumber root

    Science.gov (United States)

    Kovács, K.; Kuzmann, E.; Fodor, F.; Vértes, A.; Kamnev, A. A.

    2005-09-01

    57Fe Mössbauer spectroscopy was used to study the uptake and distribution of iron in the root of cucumber plants grown in iron-deficient modified Hoagland nutrient solution and put into iron-containing solution with 10 μM Fe citrate enriched with 57Fe (90%) only before harvesting. The Mössbauer spectra of the frozen roots exhibited two Fe3+ components with typical average Mössbauer parameters of δ = 0.5 mm s-1, Δ = 0.46 mm s-1 and δ = 0.5 mm s-1, Δ = 1.2 mm s-1 at 78 K and the presence of an Fe2+ doublet, assigned to the ferrous hexaaqua complex. This finding gives a direct evidence for the existence of Fe2+ ions produced via root-associated reduction according to the mechanism proposed for iron uptake for dicotyledonous plants. Monotonous changes in the relative content of the components were found with the time period of iron supply. The Mössbauer results are interpreted in terms of iron uptake and transport through the cell wall and membranes.

  2. Understanding mechanism of sea cucumber Apostichopus japonicus aestivation: Insights from TMT-based proteomic study.

    Science.gov (United States)

    Chen, Muyan; Li, Xingke; Zhu, Aijun; Storey, Kenneth B; Sun, Lina; Gao, Tianxiang; Wang, Tianming

    2016-09-01

    Marine invertebrate aestivation is a unique strategy for summer survival in response to hot marine conditions. The sea cucumber, Apostichopus japonicus, is an excellent model marine invertebrate for studies of environmentally-induced aestivation. In the present study, we used a tandem mass tag (TMT)-coupled LC-MS/MS approach to identify and quantify the global proteome expression profile over the aestivation-arousal cycle of A. japonicus. A total of 3920 proteins were identified from the intestine of sea cucumber. Among them, 630 proteins showed significant differential expression when comparing three conditions of sea cucumbers: non-aestivating (active), deep-aestivation (at least 15days of continuous aestivation), and arousal after aestivation (renewed moving and feeding). Sea cucumbers in deep aestivation showed substantial differentially expressed proteins (143 up-regulated and 267 down-regulated proteins compared with non-aestivating controls). These differentially expressed proteins suggested that protein and phospholipid probably are major fuel sources during hypometabolism and a general attenuation of carbohydrate metabolism was observed during deep aestivation. Differentially expressed proteins also provided the first global picture of a shift in protein synthesis, protein folding, DNA binding, apoptosis, cellular transport and signaling, and cytoskeletal proteins during deep aestivation in sea cucumbers. A comparison of arousal from aestivation with deep aestivation, revealed a general reversal of the changes that occurred in aestivation for most proteins. Western blot detection further validated the significant up-regulation of HSP70 and down-regulation of methyltransferase-like protein 7A-like in deep-aestivation. Our results suggest that there is substantial post-transcriptional regulation of proteins during the aestivation-arousal cycle in sea cucumbers.

  3. Effect of cypermethrin insecticide on the microbial community in cucumber phyllosphere

    Institute of Scientific and Technical Information of China (English)

    ZHANG Baoguo; ZHANG Hongxun; JIN Bo; TANG Ling; YANG Jianzhou; LI Baoju; ZHUANG Guoqiang; BAI Zhihui

    2008-01-01

    Cucumber (Cucumis sativus) is one of the most widely used vegetable in the world, and different pesticides have been extensively used for controlling the insects and disease pathogens of this plant. However, little is known about how the pesticides affect the microbial community in cucumber phyllosphere. This study was the first attempt to assess the impact of pyrethroid insecticide cyperemethrin on the microbial communities of cucumber phyllosphere using biochemical and genetic approaches. Phospholipid fatty acid (PLFA) assay indicated that cyperemethrin insecticide treatment led to a significant increase in both total and bacterial biomass and a decrease in fungal biomass and the ratio of Gram-positive (GP) bacteria to Gram-negative (GN) bacteria within the cucumber phyllosphere. Principal-component analyses (PCA) suggested that the number of unsaturated and cyclopropane PLFAs (16:1ω9t,18:1ω7, cy17:0, cy19:0) increased with the insecticide treatment, whereas the saturated PLFA i16:0, i17:0 decreased. The increase of GN bacteria implied that the cypermethrin insecticide might be a nutrient for the growth of these phyllosphere microbes. Terminal restriction fragment length polymorphism (T-RFLP) reinforced the PLFA results. A significant change of bacterial community structure was observed in the separate dendrogram cluster between control and treated samples with the cucumber phyllosphere following cypermethrin insecticide treatment. Moreover, the increased terminal restriction fragments (T-RFs) (58, 62, 89, 99, 119, 195, 239,311,340, and 473 bp) indicated that some bacteria might play a significant role in the insecticide degradation within the cucumber phylosphere, whereas the disappeared T-RFs (44, 51, 96, 223, 306, and 338 bp) implied that some other bacteria might potentially serve as microbial indicator of cyperemethrin insecticide exposure.

  4. Wilted cucumber plants infected by Fusarium oxysporum f. sp. cucumerinum do not suffer from water shortage.

    Science.gov (United States)

    Sun, Yuming; Wang, Min; Li, Yingrui; Gu, Zechen; Ling, Ning; Shen, Qirong; Guo, Shiwei

    2017-09-01

    Fusarium wilt is primarily a soil-borne disease and results in yield loss and quality decline in cucumber (Cucumis sativus). The main symptom of fusarium wilt is the wilting of entire plant, which could be caused by a fungal toxin(s) or blockage of water transport. To investigate whether this wilt arises from water shortage, the physiological responses of hydroponically grown cucumber plants subjected to water stress using polyethylene glycol (PEG, 6000) were compared with those of plants infected with Fusarium oxysporum f. sp. cucumerinum (FOC). Parameters reflecting plant water status were measured 8d after the start of treatment. Leaf gas exchange parameters and temperature were measured with a LI-COR portable open photosynthesis system and by thermal imaging. Chlorophyll fluorescence and chloroplast structures were assessed by imaging pulse amplitude-modulated fluorometry and transmission electron microscopy, respectively. Cucumber water balance was altered after FOC infection, with decreased water absorption and hydraulic conductivity. However, the responses of cucumber leaves to FOC and PEG differed in leaf regions. Under water stress, measures of lipid peroxidation (malondialdehyde) and chlorophyll fluorescence indicated that the leaf edge was more seriously injured, with a higher leaf temperature and disrupted leaf water status compared with the centre. Here, abscisic acid (ABA) and proline were negatively correlated with water potential. In contrast, under FOC infection, membrane damage and a higher temperature were observed in the leaf centre while ABA and proline did not vary with water potential. Cytologically, FOC-infected cucumber leaves exhibited circular chloroplasts and swelled starch grains in the leaf centre, in which they again differed from PEG-stressed cucumber leaves. This study illustrates the non-causal relationship between fusarium wilt and water transport blockage. Although leaf wilt occurred in both water stress and FOC infection, the

  5. RET is a potential tumor suppressor gene in colorectal cancer

    Science.gov (United States)

    Luo, Yanxin; Tsuchiya, Karen D.; Park, Dong Il; Fausel, Rebecca; Kanngurn, Samornmas; Welcsh, Piri; Dzieciatkowski, Slavomir; Wang, Jianping; Grady, William M.

    2012-01-01

    Cancer arises as the consequence of mutations and epigenetic alterations that activate oncogenes and inactivate tumor suppressor genes. Through a genome-wide screen for methylated genes in colon neoplasms, we identified aberrantly methylated RET in colorectal cancer. RET, a transmembrane receptor tyrosine kinase and a receptor for the GDNF-family ligands, was one of the first oncogenes to be identified and has been shown to be an oncogene in thyroid cancer and pheochromocytoma. However, unexpectedly, we found RET is methylated in 27% of colon adenomas and in 63% of colorectal cancers, and now provide evidence that RET has tumor suppressor activity in colon cancer. The aberrant methylation of RET correlates with decreased RET expression, whereas the restoration of RET in colorectal cancer cell lines results in apoptosis. Furthermore, in support of a tumor suppressor function of RET, mutant RET has also been found in primary colorectal cancer. We now show that these mutations inactivate RET, which is consistent with RET being a tumor suppressor gene in the colon. These findings suggest that the aberrant methylation of RET and the mutational inactivation of RET promote colorectal cancer formation and that RET can serve as a tumor suppressor gene in the colon. Moreover, the increased frequency of methylated RET in colon cancers compared to adenomas suggests RET inactivation is involved in the progression of colon adenomas to cancer. PMID:22751117

  6. Structure of the Wilms Tumor Suppressor

    Energy Technology Data Exchange (ETDEWEB)

    Stoll, R.; Lee, B.M.; Debler, E.W.; Laity, J.H.; Wilson, I.A.; Dyson, H.J.; Wright, P.E.

    2009-06-04

    The zinc finger domain of the Wilms tumor suppressor protein (WT1) contains four canonical Cys{sub 2}His{sub 2} zinc fingers. WT1 binds preferentially to DNA sequences that are closely related to the EGR-1 consensus site. We report the structure determination by both X-ray crystallography and NMR spectroscopy of the WT1 zinc finger domain in complex with DNA. The X-ray structure was determined for the complex with a cognate 14 base-pair oligonucleotide, and composite X-ray/NMR structures were determined for complexes with both the 14 base-pair and an extended 17 base-pair DNA. This combined approach allowed unambiguous determination of the position of the first zinc finger, which is influenced by lattice contacts in the crystal structure. The crystal structure shows the second, third and fourth zinc finger domains inserted deep into the major groove of the DNA where they make base-specific interactions. The DNA duplex is distorted in the vicinity of the first zinc finger, with a cytidine twisted and tilted out of the base stack to pack against finger 1 and the tip of finger 2. By contrast, the composite X-ray/NMR structures show that finger 1 continues to follow the major groove in the solution complexes. However, the orientation of the helix is non-canonical, and the fingertip and the N terminus of the helix project out of the major groove; as a consequence, the zinc finger side-chains that are commonly involved in base recognition make no contact with the DNA. We conclude that finger 1 helps to anchor WT1 to the DNA by amplifying the binding affinity although it does not contribute significantly to binding specificity. The structures provide molecular level insights into the potential consequences of mutations in zinc fingers 2 and 3 that are associated with Denys-Drash syndrome and nephritic syndrome. The mutations are of two types, and either destabilize the zinc finger structure or replace key base contact residues.

  7. Evolutionary relationship of alfalfa mosaic virus with cucumber mosaic virus and brome mosaic virus

    OpenAIRE

    Savithri, HS; Murthy, MRN

    1983-01-01

    The amino acid sequences of the non-structural protein (molecular weight 35,000; 3a protein) from three plant viruses - cucumber mosaic, brome mosaic and alfalfa mosaic have been systematically compared using the partial genomic sequences for these three viruses already available. The 3a protein of cucumber mosaic virus has an amino acid sequence homology of 33.7% with the corresponding protein of brome mosaic virus. A similar protein from alfalfa mosaic virus has a homology of 18.2% and 14.2...

  8. Effects of Exogenous Cinnamic Acids on the Growth and Physiological Characteristics of Cucumber Seedlings

    Institute of Scientific and Technical Information of China (English)

    2005-01-01

    In order to study the effects of exogenous cinnamic acids on plant growth, contents of photosynthetic pigment, root activities and ATPase activities of root membrane at cucumber seedling stage, the seedlings of Shandong Mici cucumber were tested. The results showed that seedlings growth, contents of photosynthetic pigment, root activities and ATPase activities of root membrane were inhibited by cinnamic acids. The growth and root activities of seedlings were significantly cinnamic acids, whereas ATPase activities exhibited a higher sensitivity and greatly decreased in the soil amended with 50 mg kg-1 cinnamic acids. These results suggested that cinnamic acids could induce a stress condition, and the stress intensities increased with enhanced cinnamic acid concentration.

  9. The Measurement of Technical Efficiency and Effective Factors in Cucumber Greenhouse (Case Study: Eastern Azarbayjan Province

    Directory of Open Access Journals (Sweden)

    B. Abdollahi

    2010-10-01

    Full Text Available The purpose of this study was to estimate technical efficiency of cucumber greenhouses in Eastern Azarbayjan. In economic literature, it means the ratio of maximum output to the inputs. The objective of this research was to determinate the effective factors influencing it's inefficiency. The method of determination of deterministic and stochastic technical efficiency is corrected ordinary least squares (COLS and maximum likelihood (ML respectively. The average of technical efficiency in province’s cucumber greenhouse is approximately about 57 and 93 percent for deterministic and stochastic frontier method respectively. Production types had positive influence on technical inefficiency whereas experience of manager have negative influence on technical inefficiency.

  10. Construction of a fosmid library of cucumber (Cucumis sativus) and comparative analyses of the eIF4E and eIF(iso)4E regions from cucumber and melon (Cucumis melo).

    Science.gov (United States)

    Meyer, J D F; Deleu, W; Garcia-Mas, J; Havey, M J

    2008-05-01

    A fosmid library of cucumber was synthesized as an unrestricted resource for researchers and used for comparative sequence analyses to assess synteny between the cucumber and melon genomes, both members of the genus Cucumis and the two most economically important plants in the family Cucurbitaceae. End sequencing of random fosmids produced over 680 kilobases of cucumber genomic sequence, of which 25% was similar to ribosomal DNAs, 25% to satellite sequences, 20% to coding regions in other plants, 4% to transposable elements, 13% to mitochondrial and chloroplast sequences, and 13% showed no hits to the databases. The relatively high frequencies of ribosomal and satellite DNAs are consistent with previous analyses of cucumber DNA. Cucumber fosmids were selected and sequenced that carried eukaryotic initiation factors (eIF) 4E and iso(4E), genes associated with recessively inherited resistances to potyviruses in a number of plants. Indels near eIF4E and eIF(iso)4E mapped independently of the zym, a recessive locus conditioning resistance to Zucchini yellow mosaic virus, establishing that these candidate genes are not zym. Cucumber sequences were compared with melon BACs carrying eIF4E and eIF(iso)4E and revealed extensive sequence conservation and synteny between cucumber and melon across these two independent genomic regions. This high degree of microsynteny will aid in the cloning of orthologous genes from both species, as well as allow for genomic resources developed for one Cucumis species to be used for analyses in other species.

  11. Tennis Elbow (Lateral Epicondylitis)

    Science.gov (United States)

    .org Tennis Elbow (Lateral Epicondylitis) Page ( 1 ) Tennis elbow, or lateral epicondyliti s, is a painful condition of the elbow caused by overuse. Not surprisingly, playing tennis or other racquet sports can cause ...

  12. Application of Wet Waste from Shrimp (Litopenaeus vannamei) with or Without Sea Mud to Feeding Sea Cucumber (Stichopus monotuberculatus)

    Institute of Scientific and Technical Information of China (English)

    CHEN Yanfeng; HU Chaoqun; RENChunhua

    2015-01-01

    In the present study, the applicability of the wet waste collected from shrimp (Litopenaeus vannamei) to the culture of sea cucumber (Stichopus monotuberculatus) was determined. The effects of dietary wet shrimp waste on the survival, specific growth rate (SGR), fecal production rate (FPR), ammonia- and nitrite-nitrogen productions of sea cucumber were studied. The total organic matter (TOM) level in the feces of sea cucumber was compared with that in corresponding feeds. Diet C (50% wet shrimp waste and 50% sea mud mash) made sea cucumber grow faster than other diets. Sea cucumber fed with either diet D (25% wet shrimp waste and 75% sea mud mash) or sole sea mud exhibited negative growth. The average lowest total FPR of sea cucumber occurred in diet A (wet shrimp waste), and there was no significant difference in total FPR between diet C and diet E (sea mud mash) (P>0.05). The average ammonia-nitrogen production of sea cucumber in different diet treatments decreased gradually with the decrease of crude protein content in different diets. The average highest nitrite-nitrogen production occurred in diet E treatment, and there was no sig-nificant difference in nitrite-nitrogen production among diet A, diet B (75% wet shrimp waste and 25% sea mud mash) and diet C treatments (P>0.05). In each diet treatment, the total organic matter (TOM) level in feces decreased to different extent compared with that in corresponding feeds.

  13. Application of wet waste from shrimp ( Litopenaeus vannamei) with or without sea mud to feeding sea cucumber ( Stichopus monotuberculatus)

    Science.gov (United States)

    Chen, Yanfeng; Hu, Chaoqun; Ren, Chunhua

    2015-02-01

    In the present study, the applicability of the wet waste collected from shrimp ( Litopenaeus vannamei) to the culture of sea cucumber ( Stichopus monotuberculatus) was determined. The effects of dietary wet shrimp waste on the survival, specific growth rate (SGR), fecal production rate (FPR), ammonia- and nitrite-nitrogen productions of sea cucumber were studied. The total organic matter (TOM) level in the feces of sea cucumber was compared with that in corresponding feeds. Diet C (50% wet shrimp waste and 50% sea mud mash) made sea cucumber grow faster than other diets. Sea cucumber fed with either diet D (25% wet shrimp waste and 75% sea mud mash) or sole sea mud exhibited negative growth. The average lowest total FPR of sea cucumber occurred in diet A (wet shrimp waste), and there was no significant difference in total FPR between diet C and diet E (sea mud mash) ( P > 0.05). The average ammonia-nitrogen production of sea cucumber in different diet treatments decreased gradually with the decrease of crude protein content in different diets. The average highest nitrite-nitrogen production occurred in diet E treatment, and there was no significant difference in nitrite-nitrogen production among diet A, diet B (75% wet shrimp waste and 25% sea mud mash) and diet C treatments ( P > 0.05). In each diet treatment, the total organic matter (TOM) level in feces decreased to different extent compared with that in corresponding feeds.

  14. Studies of Tumor Suppressor Genes via Chromosome Engineering

    Directory of Open Access Journals (Sweden)

    Hiroyuki Kugoh

    2015-12-01

    Full Text Available The development and progression of malignant tumors likely result from consecutive accumulation of genetic alterations, including dysfunctional tumor suppressor genes. However, the signaling mechanisms that underlie the development of tumors have not yet been completely elucidated. Discovery of novel tumor-related genes plays a crucial role in our understanding of the development and progression of malignant tumors. Chromosome engineering technology based on microcell-mediated chromosome transfer (MMCT is an effective approach for identification of tumor suppressor genes. The studies have revealed at least five tumor suppression effects. The discovery of novel tumor suppressor genes provide greater understanding of the complex signaling pathways that underlie the development and progression of malignant tumors. These advances are being exploited to develop targeted drugs and new biological therapies for cancer.

  15. Studies of Tumor Suppressor Genes via Chromosome Engineering.

    Science.gov (United States)

    Kugoh, Hiroyuki; Ohira, Takahito; Oshimura, Mitsuo

    2015-12-30

    The development and progression of malignant tumors likely result from consecutive accumulation of genetic alterations, including dysfunctional tumor suppressor genes. However, the signaling mechanisms that underlie the development of tumors have not yet been completely elucidated. Discovery of novel tumor-related genes plays a crucial role in our understanding of the development and progression of malignant tumors. Chromosome engineering technology based on microcell-mediated chromosome transfer (MMCT) is an effective approach for identification of tumor suppressor genes. The studies have revealed at least five tumor suppression effects. The discovery of novel tumor suppressor genes provide greater understanding of the complex signaling pathways that underlie the development and progression of malignant tumors. These advances are being exploited to develop targeted drugs and new biological therapies for cancer.

  16. Some facts and thoughts: p73 as a tumor suppressor gene in the network of tumor suppressors

    Directory of Open Access Journals (Sweden)

    Boominathan Lakshmanane

    2007-04-01

    Full Text Available Abstract The question of whether p73 is a tumor suppressor gene, is not yet answered with full confidence. The lack of spontaneous tumor formation in p73 null mice and infrequent p73 mutations seen in a variety of cancers analyzed would straightaway negate its role as a primary tumor suppressor gene. However, accumulating evidence suggest that p73 gene and its target genes are hypermethylated in the cancer of lymphoid origin. Here I discuss some facts and thoughts that support the idea that p73 could still be a tumor suppressor gene. The tumor suppressor network in which p73 appears to be a participant involves E2F1, JunB, INK4a/p16, ARF/p19, p57kip2 and BRCA1. Knock out of each gene in E2F-1-p73-JunB-p16INK4a network of tumor suppressor proteins result in lymphoma/leukemia formation. Further, I tried to explain why lymphomas are not seen in p73 null mice and why p73 gene is not prone to frequent mutation.

  17. Suppressor cell function is preserved in pemphigus and pemphigoid

    Energy Technology Data Exchange (ETDEWEB)

    King, A.J.; Schwartz, S.A.; Lopatin, D.; Voorhees, J.J.; Diaz, L.A.

    1982-09-01

    Human peripheral blood lymphocytes (PBL) are activated to become suppressor T cells (S-T-C) by incubation with Concanavalin-A (Con-A). This has become the standard method for evaluation of suppressor function in patients. S-T-C function has been found to be impaired in several autoimmune diseases, including systemic lupus erythematosus (SLE). Using this assay, we have investigated suppressor-cell function in 2 autoimmune disorders, bullous pemphigoid (BP) and pemphigus vulgaris (PV), studying 6 patients from each group. Three patients with active SLE (positive controls), and 11 normal donors (negative controls) were also included. None of these patients had received systemic therapy with the exception of 2 patients with PV who were treated with gold in the past. PBL from these patients were incubated with and without 40 micrograms/ml Con-A for 72 hr to generate suppressor cells. Both groups of PBL were then irradiated wih 1500 r cobalt. Co-cultures were set up in sextuplicate using normal PBL as responders. Responder PBL were stimulated with 0.5, 1.0, and 2.0 micrograms/ml of phytohemagglutin (PHA) and 5.0, 10.0, and 20.0 micrograms/ml of Con-A. Cultures were pulsed on day 3 with /sup 3/H-thymidine and harvested on day 4. Data were analyzed using Student's t-test. S-T-C function was found to be significantly impaired in SLE vs normal (p . 0.0316). No statistically significant difference was seen in BP (p . 0.5883) and PV (p . 0.0921) as compared with normals. A defect in suppressor cell function may still be present in patients with PV and BP for the defect may be antigen-specific and therefore remain undetected by the Con-A suppressor assay.

  18. Medieval herbal iconography and lexicography of Cucumis (cucumber and melon, Cucurbitaceae) in the Occident, 1300–1458

    Science.gov (United States)

    Paris, Harry S.; Janick, Jules; Daunay, Marie-Christine

    2011-01-01

    Background The genus Cucumis contains two species of important vegetable crops, C. sativus, cucumber, and C. melo, melon. Melon has iconographical and textual records from lands of the Mediterranean Basin dating back to antiquity, but cucumber does not. The goal of this study was to obtain an improved understanding of the history of these crops in the Occident. Medieval images purportedly of Cucumis were examined, their specific identity was determined and they were compared for originality, accuracy and the lexicography of their captions. Findings The manuscripts having accurate, informative images are derived from Italy and France and were produced between 1300 and 1458. All have an illustration of cucumber but not all contain an image of melon. The cucumber fruits are green, unevenly cylindrical with an approx. 2:1 length-to-width ratio. Most of the images show the cucumbers marked by sparsely distributed, large dark dots, but images from northern France show them as having densely distributed, small black dots. The different size, colour and distribution reflect the different surface wartiness and spininess of modern American and French pickling cucumbers. The melon fruits are green, oval to serpentine, closely resembling the chate and snake vegetable melons, but not sweet melons. In nearly all manuscripts of Italian provenance, the cucumber image is labelled with the Latin caption citruli, or similar, plural diminuitive of citrus (citron, Citrus medica). However, in manuscripts of French provenance, the cucumber image is labelled cucumeres, which is derived from the classical Latin epithet cucumis for snake melon. The absence of melon in some manuscripts and the expropriation of the Latin cucumis/cucumer indicate replacement of vegetable melons by cucumbers during the medieval period in Europe. One image, from British Library ms. Sloane 4016, has a caption that allows tracing of the word ‘gherkin’ back to languages of the geographical nativity of C

  19. A High-Density Genetic Map for Cucumber (Cucumis Sativus L. Based on Specific Length Amplified Fragment (SLAF Sequencing and QTL Analysis of Fruit Traits in Cucumber

    Directory of Open Access Journals (Sweden)

    Wenying eZhu

    2016-04-01

    Full Text Available High-density genetic linkage map plays an important role in genome assembly and QTL fine mapping. Since the coming of next-generation sequencing (NGS, makes the structure of high-density linkage maps much more convenient and practical, which simplifies SNP discovery and high-throughput genotyping. In this research, a high-density linkage map of cucumber was structured using specific length amplified fragment sequencing, using 153 F2 populations of S1000×S1002. The high-density genetic map composed 3,057 SLAFs, including 4,475 SNP markers on 7 chromosomes, and spanned 1061.19cM. The average genetic distance is 0.35cM. Based on this high-density genome map, QTL analysis was performed on two cucumber fruit traits, fruit length and fruit diameter. There are 15 QTLs for the two fruit traits were detected.

  20. High-Throughput Sequencing Identifies Novel and Conserved Cucumber (Cucumis sativus L. microRNAs in Response to Cucumber Green Mottle Mosaic Virus Infection.

    Directory of Open Access Journals (Sweden)

    H W Liu

    Full Text Available Seedlings of Cucumis sativus L. (cv. 'Zhongnong 16' were artificially inoculated with Cucumber green mottle mosaic virus (CGMMV at the three-true-leaf stage. Leaf and flower samples were collected at different time points post-inoculation (10, 30 and 50 d, and processed by high throughput sequencing analysis to identify candidate miRNA sequences. Bioinformatic analysis using screening criteria, and secondary structure prediction, indicated that 8 novel and 23 known miRNAs (including 15 miRNAs described for the first time in vivo were produced by cucumber plants in response to CGMMV infection. Moreover, gene expression profiles (p-value <0.01 validated the expression of 3 of the novel miRNAs and 3 of the putative candidate miRNAs and identified a further 82 conserved miRNAs in CGMMV-infected cucumbers. Gene ontology (GO analysis revealed that the predicted target genes of these 88 miRNAs, which were screened using the psRNATarget and miRanda algorithms, were involved in three functional categories: 2265 in molecular function, 1362 as cellular components and 276 in biological process. The subsequent Kyoto Encyclopedia of Genes and Genomes (KEGG pathway analysis revealed that the predicted target genes were frequently involved in metabolic processes (166 pathways and genetic information processes (40 pathways and to a lesser degree the biosynthesis of secondary metabolites (12 pathways. These results could provide useful clues to help elucidate host-pathogen interactions in CGMMV and cucumber, as well as for the screening of resistance genes.

  1. AGROBOTANICAL ILLUSTRATION OF TURBAN FORMS OF CUCUMBER, AS A SOURCE OF INFORMATION OF DISTRIBUTION, EVOLUTION AND USE OF THIS CULTURE

    Directory of Open Access Journals (Sweden)

    Tsatsenko L. V.

    2014-09-01

    Full Text Available The article considers turban cucumber forms, we have also described the origin of this characteristic, briefly overviewed turban forms in species of the family of Cucurbitaceae. We have given the agro-botanical iconography of this trait in pumpkin cultures for cucumis. In Europe, China and America turbanoformis cucumber forms are used as a vegetable, there are some varieties. It is shown that turbanoformis forms are found in the fruit of the cucumber with hermaphrodite flower, polunina ovaries, short or shareplace the melon, and also in forms with the ongoing evolutionary process

  2. 野生黄瓜代换系的构建%Construction of Wild Cucumber Substitution Lines

    Institute of Scientific and Technical Information of China (English)

    李学峰; 胡晓文; 张圣平; 顾兴芳; 张忠华; 黄三文

    2011-01-01

    Cucumis sativus var. hardwickii Royle is the only extant wild subspecies of domesticated cucumber ( Cucumis sativus var. sativus L. ). The wild cucumber contains several favorable traits including root-knot nematodes and CMV resistance, etc. It has a strong branching capability. The fruit shape of wild cucumber is oval and it tastes very bitter. In this study, we created a set of substitution lines using wild cucumber accession lines PI183967 as the donor and domesticated cucumber inbred Xintaimici as the receptor. During the process of backcrossing and self crossing, the wild cucumber genomic fragments were tracked using 62 SSR markers distributed in the cucumber genome. Subsequently, 21 single-segment substitution lines and 10 double-segment substitution lines were obtained, which in total cover 96.81% of the wild cucumber genome. These substitution lines provided a new resource for the utilization of genes from wild cucumber and also the materials basis for the precise genetic analysis of quantitative traits in cucumber, as well as for the investigation of molecular mechanism of evolution from wild cucumber to domesticated cucumber.%野牛黄瓜(Cucumis sativus var.hardwickii Royle)是目前唯一被发现的黄瓜野生变种,具有抗根结线虫和CMV等优异性状,分枝性强,果实为卵圆形,味极苦.利用野生黄瓜品系PI183967为供体材料,栽培黄瓜(Cucumis sativus var.sativus L.)‘新泰密刺'纯系为受体材料,经过3次回交和1次自交,创造了一套代换系材料.在回交和自交过程中,利用均匀分布在全基凶组上的62个SSR标记,跟踪野生黄瓜的基因组片段,共选择出21份单片段和10份双片段代换系材料,共得到代换片段41个.这些野生代换片段重叠累加覆盖野生黄瓜染色体组96.81%.这套代换系材料为利用野生黄瓜的优异基因提供了新的种质资源,也为精确分析黄瓜数量性状奠定了材料基础.

  3. Rapid, bilateral changes in growth rate and curvature during gravitropism of cucumber hypocotyls: implications for mechanism of growth control

    Science.gov (United States)

    Cosgrove, D. J.

    1990-01-01

    The growth response of etiolated cucumber (Cucumis sativus L.) hypocotyls to gravitropic stimulation was examined by means of time-lapse photography and high-resolution analysis of surface expansion and curvature. In comparison with video analysis, the technique described here has five- to 20-fold better resolution; moreover, the mathematical fitting method (cubic splines) allows direct estimation of local and integrated curvature. After switching seedlings from a vertical to horizontal position, both upper and lower surfaces of the stem reacted after a lag of about 11 min with a two- to three-fold increase in surface expansion rate on the lower side and a cessation of expansion, or slight compression, on the upper surface. This growth asymmetry was initiated simultaneously along the length of the hypocotyl, on both upper and lower surfaces, and did not migrate basipetally from the apex. Later stages in the gravitropic response involved a complex reversal of the growth asymmetry, with the net result being a basipetal migration of the curved region. This secondary growth reversal may reflect oscillatory and/or self-regulatory behaviour of growing cells. With some qualifications, the kinetics and pattern of growth response are consistent with a mechanism involving hormone redistribution, although they do not prove such a mechanism. The growth kinetics require a growth mechanism which can be stimulated by two- to three-fold or completely inhibited within a few minutes.

  4. Yellowing disease in zucchini squash produced by mixed infections of Cucurbit yellow stunting disorder virus and Cucumber vein yellowing virus.

    Science.gov (United States)

    Gil-Salas, Francisco M; Peters, Jeff; Boonham, Neil; Cuadrado, Isabel M; Janssen, Dirk

    2011-11-01

    Zucchini squash is host to Cucurbit yellow stunting disorder virus (CYSDV), a member of the genus Crinivirus, and Cucumber vein yellowing virus (CVYV), a member of the genus Ipomovirus, both transmitted by the whitefly Bemisia tabaci. Field observations suggest the appearance of new symptoms observed on leaves of zucchini squash crops when both viruses were present. When infected during controlled experiments with CYSDV only, zucchini plants showed no obvious symptoms and the virus titer decreased between 15 and 45 days postinoculation (dpi), after which it was no longer detected. CVYV caused inconspicuous symptoms restricted to vein clearing on some of the apical leaves and the virus accumulated progressively between 15 and 60 dpi. Similar accumulations of virus followed single inoculations with the potyvirus Zucchini yellow mosaic virus (ZYMV) and plants showed severe stunting, leaf deformation, and mosaic yellowing. However, in mixed infections with CYSDV and CVYV, intermediate leaves showed chlorotic mottling which evolved later to rolling, brittleness, and complete yellowing of the leaf lamina, with exception of the veins. No consistent alteration of CVYV accumulation was detected but the amounts of CYSDV increased ≈100-fold and remained detectable at 60 dpi. Such synergistic effects on the titer of the crinivirus and symptom expression were not observed when co-infected with ZYMV.

  5. Effects of Arbuscular Mycorrhizal Fungi Communities on Soil Quality and the Growth of Cucumber Seedlings in a Greenhouse Soil of Continuously Planting Cucumber

    Institute of Scientific and Technical Information of China (English)

    LI Yan; CHEN Ying-Long; LI Min; LIN Xian-Gui; LIU Run-Jin

    2012-01-01

    A pot experiment was performed to determine the effects of arbuscular mycorrhizal fungi (AMF) communities on soil properties and the growth of cucumber seedlings in a degraded soil that had been used for continuous cucumber monoculture in a greenhouse for 15 years.In the experiment,AMF communities (created by combining various AMF species that were found to be dominant in natural farm soil) were inoculated into the degraded soil,and then the soil was planted with cucumber.Inoculation with AMF communities did not affect soil pH but increased soil aggregate stability and decreased the concentrations of salt ions and electrical conductivity (EC) in the soil.Inoculation with AMF communities increased the numbers of culturable bacteria and actinomycetes but reduced the number of fungi. AMF communities increased plant growth,soluble sugar content,chlorophyll content,and root activity compared to non-mycorrhizal or a single AMF species treatments. Improvements of soil quality and plant growth were greatest with the following two communities:Glomus etunicatum + G.mosseae + Gigaspora margarita + Acaulospora lacunosa and G.aggregatum + G.etunicatum +G.mosseae + G.versiforme + G.margarita + A.lacunosa.The results suggested that certain AMF communities could substantially improve the quality of degraded soil.

  6. Effect of (+)-pulegone and other oil components of Mentha x piperita on cucumber respiration

    NARCIS (Netherlands)

    Mucciarelli, M.; Camusso, W.; Bertea, C.M.; Bossi, S.; Maffei, M.

    2001-01-01

    Peppermint (Menthaxpiperita L.) essential oil and main components were assessed for their ability to interfere with plant respiratory functions. Tests were conducted on both root segments and mitochondria isolated by etiolated seedlings of cucumber (Cucumis sativus L.). Total essential oil inhibited

  7. Hyperspectral Imaging for Determining Pigment Contents in Cucumber Leaves in Response to Angular Leaf Spot Disease.

    Science.gov (United States)

    Zhao, Yan-Ru; Li, Xiaoli; Yu, Ke-Qiang; Cheng, Fan; He, Yong

    2016-06-10

    Hyperspectral imaging technique was employed to determine spatial distributions of chlorophyll (Chl), and carotenoid (Car) contents in cucumber leaves in response to angular leaf spot (ALS). Altogether, 196 hyperspectral images of cucumber leaves with five infection severities of ALS were captured by a hyperspectral imaging system in the range of 380-1,030 nm covering 512 wavebands. Mean spectrum were extracted from regions of interest (ROIs) in the hyperspectral images. Partial least square regression (PLSR) models were used to develop quantitative analysis between the spectra and the pigment contents measured by biochemical analyses. In addition, regression coefficients (RCs) in PLSR models were employed to select important wavelengths (IWs) for modelling. It was found that the PLSR models developed by the IWs provided the optimal measurement results with correlation coefficient (R) of prediction of 0.871 and 0.876 for Chl and Car contents, respectively. Finally, Chl and Car distributions in cucumber leaves with the ALS infection were mapped by applying the optimal models pixel-wise to the hyperspectral images. The results proved the feasibility of hyperspectral imaging for visualizing the pigment distributions in cucumber leaves in response to ALS.

  8. Systems pharmacology-based drug discovery for marine resources: an example using sea cucumber (Holothurians).

    Science.gov (United States)

    Guo, Yingying; Ding, Yan; Xu, Feifei; Liu, Baoyue; Kou, Zinong; Xiao, Wei; Zhu, Jingbo

    2015-05-13

    Sea cucumber, a kind of marine animal, have long been utilized as tonic and traditional remedies in the Middle East and Asia because of its effectiveness against hypertension, asthma, rheumatism, cuts and burns, impotence, and constipation. In this study, an overall study performed on sea cucumber was used as an example to show drug discovery from marine resource by using systems pharmacology model. The value of marine natural resources has been extensively considered because these resources can be potentially used to treat and prevent human diseases. However, the discovery of drugs from oceans is difficult, because of complex environments in terms of composition and active mechanisms. Thus, a comprehensive systems approach which could discover active constituents and their targets from marine resource, understand the biological basis for their pharmacological properties is necessary. In this study, a feasible pharmacological model based on systems pharmacology was established to investigate marine medicine by incorporating active compound screening, target identification, and network and pathway analysis. As a result, 106 candidate components of sea cucumber and 26 potential targets were identified. Furthermore, the functions of sea cucumber in health improvement and disease treatment were elucidated in a holistic way based on the established compound-target and target-disease networks, and incorporated pathways. This study established a novel strategy that could be used to explore specific active mechanisms and discover new drugs from marine sources. Copyright © 2015 Elsevier Ireland Ltd. All rights reserved.

  9. Microbiological preservation of cucumbers for bulk storage by the use of acetic acid and food preservatives

    Science.gov (United States)

    Microbial growth did not occur when cucumbers were preserved without a thermal process by storage in solutions containing acetic acid, sodium benzoate, and calcium chloride to maintain tissue firmness. The concentrations of acetic acid and sodium benzoate required to assure preservation were low en...

  10. Development of a Hyperspectral Imaging System for Online Quality Inspection of Pickling Cucumbers

    Science.gov (United States)

    This paper reports on the development of a hyperspectral imaging prototype for evaluation of external and internal quality of pickling cucumbers. The prototype consisted of a two-lane round belt conveyor, two illumination sources (one for reflectance and one for transmittance), and a hyperspectral i...

  11. Hyperspectral imaging-based classification and wavebands selection for internal defect detection of pickling cucumbers

    Science.gov (United States)

    Hyperspectral imaging is useful for detecting internal defect of pickling cucumbers. The technique, however, is not yet suitable for high-speed online implementation due to the challenges for analyzing large-scale hyperspectral images. This research was aimed to select the optimal wavebands from the...

  12. Optical Absorption and Scattering Properties of Normal and Defective Pickling Cucumbers for 700-1000 nm

    Science.gov (United States)

    Internal defect in pickling cucumbers can cause bloater damage during brining, which lowers the quality of final pickled products and results in economic loss for the pickle industry. Hence it is important to have an effective optical inspection system for detection and segregation of defective pick...

  13. Climatic Risk of Field Cultivation of Cucumber (Cucumis sativus L. in Poland

    Directory of Open Access Journals (Sweden)

    Robert KALBARCZYK

    2010-12-01

    Full Text Available The goal of the present work was to separate zones of pickling cucumber field cultivation in Poland according to the various degrees of climatic risk. The study used 40-years of (1966-2005 data from 28 experimental stations of the Research Centre for Cultivar Testing. The data characterised the course of the growth, development, cucumber crop productivity and also the agrotechnical dates. Additionally, the work considered agrometeorological data of 7 development stages of the analysed plant: sunshine duration, soil temperature at a height of 5 cm, air temperature at a height of 2 m and 5 cm above ground level and atmospheric precipitation. The agrometeorological data was collected from 53 meteorological stations, in the Polish network of the Institute of Meteorology and Water Management. Weather-yield regression equations were used to determine unfavourable agrometeorological elements which is the best way to determined the quantity of the cucumber total and marketable yield. The highest climatic risk of pickling cucumber field cultivation occurred in about 7% of Poland’s area. This is the area covering the southwestern, southeastern, the northern and northeastern parts of the country. In these areas, very high occurrence frequency of agrometeorological elements was noted. These elements were: air and soil temperatures that were too low during the whole growing season and, too short of a duration of the period without frost, lasting ≤120 days.

  14. Characterization of the Optical Properties of Normal and Defective Pickling Cucumbers and Whole Pickles

    Science.gov (United States)

    Internal defect in pickling cucumbers can cause bloater damage during brining, which lowers the quality of final pickled products and results in economic loss for the pickle industry. Hence it is important to have an effective optical inspection system for detection and segregation of defective pick...

  15. Assessment of chilling injury and molecular marker analysis in cucumber cultivars (Cucumis sativus L.)

    Science.gov (United States)

    The responses to chilling temperature of 12 Korean cucumber varieties were compared to those of two U.S.A. (previously determined cold tolerant NC76 and 'Chipper'), and Chinese and Japanese germplasms. Seedlings of each entry were exposed to 4 degrees C (Experiment 1) and 1 degree C (Experiments 2 ...

  16. Cucumber as a model plant to study mitochondrial-nuclear interactions

    Science.gov (United States)

    The three genomes of cucumber (Cucumis sativus) show different modes of transmission: maternal for plastid, paternal for mitochondrial (mt), and biparental for nuclear DNA. When the highly inbred line ‘B’ is passed through cell cultures, paternally transmitted mosaic (MSC) phenotypes appear after re...

  17. USDA, ARS EOM 402-10 high B-carotene cucumber

    Science.gov (United States)

    A high B-carotene cucumber (Cucumis sativus var. sativus L.) line EOM 402-10 is being released. This line was derived from a cross between the "Xishuangbanna gourd" (XIS; Cucumis sativus var. xishuangbannanesis Qi et Yuan; 2n = 2x = 14) that bears orange fruit and the non-orange-fruited cultivated c...

  18. Genetic and environmental effects on production of spontaneous tetraploids in cucumber (Cucumis sativus L.)

    Science.gov (United States)

    The appearance of spontaneous tetraploid (4x) plants is a serious problem for cucumber growers and the seed industry. These plants produce unacceptable fruits with poor quality that do not meet market standards, and result in substantial losses. A higher frequency of spontaneous 4x plants has been a...

  19. Gladiolus plants transformed with single-chain variable fragment antibodies to Cucumber mosaic virus

    Science.gov (United States)

    Transgenic plants of Gladiolus ‘Peter Pears’ or ‘Jenny Lee’ were developed that contain single-chain variable fragments (scFv) to Cucumber mosaic virus (CMV) subgroup I or II. The CMV subgroup I heavy and light chain scFv fragments were placed under control of either the duplicated CaMV 35S or suga...

  20. Inter- and Intramolecular recombinations in the Cucumber Mosaic Virus genome related to adaptation to Alstroemeria

    NARCIS (Netherlands)

    Chen, Y.K.; Goldbach, R.W.; Prins, M.W.

    2002-01-01

    In four distinct alstroemeria-infecting cucumber mosaic virus (CMV) isolates, additional sequences of various lengths were present in the 3' nontranslated regions of their RNAs 2 and 3, apparently the result of intra- and intermolecular recombination events. Competition experiments revealed that the

  1. Occurence of Cucumber Mosaic Virus in Ornamental Plants and Perspectives of Transgenic Control

    NARCIS (Netherlands)

    Chen, Y.K.

    2003-01-01

    This thesis described the characterization of a range of ornamental-infecting Cucumber mosaic virus strains and the development of novel transgene constructs to improve the efficiency of obtaining resistant transformants which is essential for most ornamental plants that are diffi

  2. Alstroemeria-infecting cucumber mosaic virus isolates contain additional sequences in the RNA 3 segment.

    NARCIS (Netherlands)

    Chen, Y.K.; Prins, M.W.; Derks, A.F.L.M.; Langeveld, S.A.; Goldbach, R.W.

    2002-01-01

    The coat protein (CP) genes and flanking regions of three alstroemeria-infecting cucumber mosaic virus isolates (CMV-ALS), denoted ALS-LBO, ALS-IPO, and ALS-NAK, were cloned and their nucleotide sequence determined and compared at both nucleic acid and deduced protein level with the published sequen

  3. Effect of vermicompost and cucumber cultivar on population growth attributes of the melon aphid (Hemiptera: Aphididae).

    Science.gov (United States)

    Razmjou, J; Mohammadi, M; Hassanpour, M

    2011-08-01

    Worldwide, the developing industry of cucumbers (Cucumis sativus L.) grown in greenhouses is threatened by damage from sucking pests, especially aphids. Among these, the melon aphid, Aphis gossypii Glover (Hemiptera: Aphididae), is the most serious. We tested the effect of two cucumber cultivars ('Royal' and'Storm') and three vermicompost concentrations (0 [control], 20, and 30%) in field soil on the development and fecundity rates of A. gossypii, by using a randomized complete block design with four replicates as a factorial experiment. The developmental times of nymphs reared on plants grown into the three vermicompost concentrations ranged from 5.5 (0%) to 8.7 (30%) d (on Storm) and from 4.3 (0%) to 7 (30%) d (on Royal). The developmental time of melon aphid's nymphs was greatest on plants grown in the culture medium with 30% vermicompost rate and least on plants reared in the soil without vermicompost. The intrinsic rate of natural increase (r,,) of A. gossypii ranged from 0.204 d(-1) on plants grown in the soil amended with 30% vermicompost rate (on Storm seedlings) to 0.458 d(-1) on plants grown in the soil without vermicompost (on Royal seedlings). Accordingly, our findings confirm that a combination of a low level of vermicompost and a partially resistant cucumber cultivar might play an important role in managing this aphid on cucumbers in greenhouses.

  4. Preventive Intra Oral Treatment of Sea Cucumber Ameliorate OVA-Induced Allergic Airway Inflammation.

    Science.gov (United States)

    Lee, Da-In; Park, Mi-Kyung; Kang, Shin Ae; Choi, Jun-Ho; Kang, Seok-Jung; Lee, Jeong-Yeol; Yu, Hak Sun

    2016-01-01

    Sea cucumber extracts have potent biological effects, including anti-viral, anti-cancer, antibacterial, anti-oxidant, and anti-inflammation effects. To understand their anti-asthma effects, we induced allergic airway inflammation in mice after 7 oral administrations of the extract. The hyper-responsiveness value in mice with ovalbumin (OVA)-alum-induced asthma after oral injection of sea cucumber extracts was significantly lower than that in the OVA-alum-induced asthma group. In addition, the number of eosinophils in the lungs of asthma-induced mice pre-treated with sea cucumber extract was significantly decreased compared to that of PBS pre-treated mice. Additionally, CD4[Formula: see text]CD25[Formula: see text]Foxp3[Formula: see text]T (regulatory T; Treg) cells significantly increased in mesenteric lymph nodes after 7 administrations of the extract. These results suggest that sea cucumber extract can ameliorate allergic airway inflammation via Treg cell activation and recruitment to the lung.

  5. Fermentation cover brine reformulation for cucumber processing with low salt to reduce the incidence of bloaters

    Science.gov (United States)

    Reformulation of cucumber fermentation cover brines containing calcium chloride instead of sodium chloride (NaCl) was explored as a mean to minimize the incidence of bloater defect. This study particularly focused on cover brine supplementation with calcium hydroxide, NaCl, and acids to enhance buff...

  6. The Effect of Washing and Peeling on Reduction of Dithiocarbamates Residues in Cucumber and Tomato

    Directory of Open Access Journals (Sweden)

    Mohammad Reza Mehrasebi

    2016-03-01

    Full Text Available Background: Dithiocarbamates, the main group of fungicides, are used to control about 400 pathogens in more than 70 crops. These pesticides are widely applied to crops including potato, cereal, apple, pear and leafy vegetables throughout the world since 1960. From the late 1980s, using these fungicides has caused much debate among regulators about their long-term effects on consumers and occupational users. Method: In this study the residues of Dithiocarbamates in cucumber and tomato using the colorimetric method (Keppel method was measured. Respectively 80 and 45 samples of greenhouse cucumber and tomato were collected from Zanjan vegetables center in autumns and winter 2013. The samples were analyzed in 4 treatments of: unwashed, washing with water, washing whit detergent and peeling. Result: The results showed that the average concentration of Dithiocarbamates residues in unwashed greenhouse cucumber and tomatoes were 384.5 µg/kg and 65 µg/kg respectively. 35% and 5% of unwashed and water washed cucumber and tomato samples (respectively had higher Dithiocarbamates residue than MRL recommended by Institute of Standards and Industrial Research of Iran (0.5mg/kg. Conclusion: The treatments of washing and peeling had significant effect on the reduction of Dithiocarbamates residues in the all samples.

  7. Bacterial Diversity of Gut Content in Sea Cucumber (Apostichopus japonicus) and Its Habitat Surface Sediment

    Institute of Scientific and Technical Information of China (English)

    GAO Fei; TAN Jie; SUN Huiling; YAN Jingping

    2014-01-01

    This study investigated the bacterial diversity of gut content of sea cucumber (Apostichopus japonicus) and its habitat surface sediment in a bottom enhancement area using PCR-based denaturing gradient gel electrophoresis (DGGE) technique. Bacte-rial diversity evaluation showed that the value of the Shannon-Wiener index of gut content in different intestinal segments of A. ja-ponicus varied between 2.88 and 3.00, lower than that of the surrounding sediment (3.23). Phylogenetic analysis showed that bacte-rial phylotypes in gut content and the surrounding sediment of A. japonicus were closely related to Proteobacteria includingγ-,α-,δ-andε-proteobacteria, Bacteroidetes, Firmicute, and Actinobacteria, of whichγ-proteobacteria were predominant. These results sug-gested that the sea cucumber A. japonicus was capable of feeding selectively, and PCR-DGGE was applicable for characterizing the bacterial community composition in gut content and the surrounding sediment of sea cucumber. Further investigation targeting longer 16S rDNA gene fragments and/or functional genes was recommended for obtaining more information of the diversity and function of bacterial community in the gut content of sea cucumber.

  8. Asynchronous meiosis in Cucumis hystrix-cucumber synthetic tetraploids resulting in low male fertility

    Science.gov (United States)

    Wide hybridization is an important tool for crop improvement. Recently, we successfully developed a synthetic allotetraploid from interspecific cross between cucumber and its relative Cucumis hystrix-(2n = 2x =24) followed by chemical induction of chromosome doubling. The resulting allotetraploid wa...

  9. Characterization of a protein kinase gene responsive to auxin and gibberellin in cucumber hypocotyls.

    Science.gov (United States)

    Chono, M; Nemoto, K; Yamane, H; Yamaguchi, I; Murofushi, N

    1998-09-01

    By means of the PCR, cDNA clones encoding putative protein kinases have been obtained from cucumber hypocotyls. The abundance of the transcript of one of these genes, which was named CsPK3, increased on treatment with gibberellin (GA4) and/or auxin (IAA). We screened a cucumber cDNA library to clone CsPK3 cDNA. The cDNA clone (cCsPK3) encodes an open reading frame of 1,413 bp (471 amino acids), and its predicted amino acid sequence showed homology with those of serine/threonine protein kinases. Northern blot analysis indicated that IAA was more active than GA4 in increasing the level of CsPK3 mRNA in cucumber hypocotyls and that the increase in the level of CsPK3 mRNA on treatment with IAA was not inhibited by pretreatment with a protein synthesis inhibitor. The level of CsPK3 mRNA was high in hypocotyls of dark-grown cucumber seedlings and decreased to less than 50% of the original level within 15 min of the start of irradiation with white light.

  10. Identification and transcriptional profiling of differentially expressed genes associated with resistance to Pseudoperonospora cubensis in cucumber.

    Science.gov (United States)

    Li, Jian-Wu; Liu, Jun; Zhang, He; Xie, Cong-Hua

    2011-03-01

    To identify genes induced during Pseudoperonospora cubensis (Berk. and Curk.) Rostov. infection in cucumber (Cucumis sativus L.), the suppression subtractive hybridization (SSH) was performed using mixed cDNAs prepared from cucumber seedlings inoculated with the pathogen as a tester and cDNA from uninfected cucumber seedlings as a driver. A forward subtractive cDNA library (FSL) and a reverse subtractive cDNA library (RSL) were constructed, from which 1,416 and 1,128 recombinant clones were isolated, respectively. Differential screening of the preferentially expressed recombinant clones identified 58 unique expressed sequence tags (ESTs) from FSL and 29 from RSL. The ESTs with significant protein homology were sorted into 13 functional categories involved in nearly the whole process of plant defense such as signal transduction and cell defense, transcription, cell cycle and DNA processing, protein synthesis, protein fate, proteins with binding functions, transport, metabolism and energy. The expressions of twenty-five ESTs by real-time quantitative RT-PCR confirmed that differential gene regulation occurred during P. cubensis infection and inferred that higher and earlier expression of transcription factors and signal transduction associated genes together with ubiquitin/proteasome and polyamine biosynthesis pathways may contribute to the defense response of cucumber to P. cubensis infection. The transcription profiling of selected down-regulated genes revealed that suppression of the genes in reactive oxygen species scavenging system and photosynthesis pathway may inhibit disease development in the host tissue.

  11. Silicon enhances leaf remobilization of iron in cucumber under limited iron conditions

    DEFF Research Database (Denmark)

    Pavlovic, Jelena; Samardzic, Jelena; Kostic, Ljiljana

    2016-01-01

    leaves and the subsequent retranslocation of Fe to young leaves of cucumber (Cucumis sativus) plants growing under Fe-limiting conditions was investigated. METHODS: Iron ((57)Fe or naturally occurring isotopes) was measured in leaves at different positions on plants hydroponically growing with or without...

  12. Effects of two different formulations of metalaxyl on their residues in cucumber.

    Science.gov (United States)

    Talebi, Khalil

    2002-01-01

    Investigations were carried out on the presence of metalaxyl residues in field grown cucumbers. In one experiment, cucumber plants underwent once and twice sprayings by Ridomil-MZ 72 WP at 2.5 g/litre. In another, single and double applications of metalaxyl granule (5G) were carried out at 5 g/m2. Fungicide application performed every 14 days. Samples were taken at different time intervals and metalaxyl level was determined by HPLC. The results showed variable dissipation rates of metalaxyl residues in cucumber. In samples from single and double sprayed plots, the residues were 0.19 and 0.08 mg/kg 14 days after treatment respectively. In single granulated plots, the residues increased during the first 7 days and then decreased to 0.85 mg/kg, 14 days after granule application. However, in double granulated plots, the residues decreased to 0.02 mg/kg after the same period of time. In all treatments except single granulated plots, the residues declined below the MRL (0.5 mg/kg), 7 days after application. These experiments showed that two times spraying and granule applications did not cause the fungicide accumulation in cucumber.

  13. Inter- and intramolecular recombinations in the cucumber mosaic virus genome related to adaptation to alstroemeria.

    Science.gov (United States)

    Chen, Yuh-Kun; Goldbach, Rob; Prins, Marcel

    2002-04-01

    In four distinct alstroemeria-infecting cucumber mosaic virus (CMV) isolates, additional sequences of various lengths were present in the 3' nontranslated regions of their RNAs 2 and 3, apparently the result of intra- and intermolecular recombination events. Competition experiments revealed that these recombined RNA 2 and 3 segments increased the biological fitness of CMV in alstroemeria.

  14. Cucumber (Cucumis sativus L.) seed performance as influenced by ovary and ovule position

    NARCIS (Netherlands)

    Jing, H.C.; Jalink, H.; Bergervoet, J.W.; Klooster, M.; Du, S.L.; Bino, R.J.; Hilhorst, H.W.M.; Groot, S.P.C.

    2000-01-01

    The performance of cucumber (Cucumis sativus L.) seeds in relation to ovary and ovule position was monitored during seed production. Seeds from three (first, seventh and tenth nodes) fruit positions and three (stylar, intermediate and peduncular) ovule positions were harvested serially during

  15. A model for prediction of yield and quality of cucumber fruits

    NARCIS (Netherlands)

    Marcelis, L.F.M.; Gijzen, H.

    1998-01-01

    The mechanistic model KOSI was developed to predict the weekly fresh weight harvest of cucumber fruits and their quality. The model consists of modules for greenhouse climate, greenhouse light transmission, light interception by the crop, leaf and canopy photosynthesis, assimilate partitioning, dry

  16. Characterisation of inorganic elements and volatile organic compounds in the dried sea cucumber Stichopus japonicus.

    Science.gov (United States)

    Lee, Hae-Won; Lim, Na-Lae; Cho, Kichul; Yang, Hye Young; Yim, Kyung June; Kim, Mi-Ju; Lee, Myunglip; Kim, Dong Hyeun; Koh, Hyoung Bum; Jung, Won-Kyo; Roh, Seong Woon; Kim, Daekyung

    2014-03-15

    The sea cucumber Stichopus japonicus lives in a variety of marine habitats and is an important cultivated edible aquatic species in East Asia. In this study, S. japonicus, collected from the sea near Jeju Island of Korea, was lyophilised or vacuum-dried and then analysed by gas chromatography-mass spectrometry (GC-MS) or inductively coupled plasma mass spectrometry (ICP-MS). The GC-MS profiles of vacuum-dried and lyophilised samples differed. Based on direct injection and static headspace analysis, 37 volatile organic compounds (VOCs) were identified in vacuum-dried samples and 33 VOCs were identified in lyophilised samples. Therefore, the odour of vacuum-dried sea cucumber is thought to be due to the presence of various VOCs that are absent in lyophilised sea cucumber. According to ICP-MS analysis, the levels of 15 inorganic elements were slightly higher in lyophilised samples than in vacuum-dried samples. The results of the inorganic and organic chemical analyses provide information about the composition of dried sea cucumber. Copyright © 2013 Elsevier Ltd. All rights reserved.

  17. Non-destructive detection of pesticide residues in cucumber using visible/near-infrared spectroscopy.

    Science.gov (United States)

    Jamshidi, Bahareh; Mohajerani, Ezeddin; Jamshidi, Jamshid; Minaei, Saeid; Sharifi, Ahmad

    2015-01-01

    The feasibility of using visible/near-infrared (Vis/NIR) spectroscopy was assessed for non-destructive detection of diazinon residues in intact cucumbers. Vis/NIR spectra of diazinon solution and cucumber samples without and with different concentrations of diazinon residue were analysed at the range of 450-1000 nm. Partial least squares-discriminant analysis (PLS-DA) models were developed based on different spectral pre-processing techniques to classify cucumbers with contents of diazinon below and above the MRL as safe and unsafe samples, respectively. The best model was obtained using a first-derivative method with the lowest standard error of cross-validation (SECV = 0.366). Moreover, total percentages of correctly classified samples in calibration and prediction sets were 97.5% and 92.31%, respectively. It was concluded that Vis/NIR spectroscopy could be an appropriate, fast and non-destructive technology for safety control of intact cucumbers by the absence/presence of diazinon residues.

  18. Alstroemeria-infecting cucumber mosaic virus isolates contain additional sequences in the RNA 3 segment.

    NARCIS (Netherlands)

    Chen, Y.K.; Prins, M.W.; Derks, A.F.L.M.; Langeveld, S.A.; Goldbach, R.W.

    2002-01-01

    The coat protein (CP) genes and flanking regions of three alstroemeria-infecting cucumber mosaic virus isolates (CMV-ALS), denoted ALS-LBO, ALS-IPO, and ALS-NAK, were cloned and their nucleotide sequence determined and compared at both nucleic acid and deduced protein level with the published

  19. The Psm locus controls paternal sorting of the cucumber mitochondrial genome.

    Science.gov (United States)

    Havey, M J; Park, Y H; Bartoszewski, G

    2004-01-01

    The mitochondrial genome of cucumber shows paternal transmission and there are no reports of variation for mitochondrial transmission in cucumber. We used a mitochondrially encoded mosaic (MSC) phenotype to reveal phenotypic variation for mitochondrial-genome transmission in cucumber. At least 10 random plants from each of 71 cucumber plant introductions (PIs) were crossed as the female with an inbred line (MSC16) possessing the MSC phenotype. Nonmosaic F1 progenies were observed at high frequencies (greater than 50%) in F1 families from 10 PIs, with the greatest proportions being from PI 401734. Polymorphisms near the mitochondrial cox1 gene and JLV5 region revealed that nonmosaic hybrid progenies from crosses of PI 401734 with MSC16 as the male possessed the nonmosaic-inducing mitochondrial DNA (mtDNA) from the paternal parent. F2) F3, and backcross progenies from nonmosaic F1 plants from PI 401734 x MSC16 were testcrossed with MSC16 as the male parent to reveal segregation of a nuclear locus (Psm for Paternal sorting of mitochondria) controlling sorting of mtDNA from the paternal parent. Psm is a unique locus at which the maternal genotype affects sorting of paternally transmitted mtDNA.

  20. Effect of (+)-pulegone and other oil components of Mentha x piperita on cucumber respiration

    NARCIS (Netherlands)

    Mucciarelli, M.; Camusso, W.; Bertea, C.M.; Bossi, S.; Maffei, M.

    2001-01-01

    Peppermint (Menthaxpiperita L.) essential oil and main components were assessed for their ability to interfere with plant respiratory functions. Tests were conducted on both root segments and mitochondria isolated by etiolated seedlings of cucumber (Cucumis sativus L.). Total essential oil inhibited

  1. Functional imaging of plants: A nuclear magnetic resonance study of a cucumber plant

    NARCIS (Netherlands)

    Scheenen, T.; Heemskerk, A.; Jager, de A.; Vergeldt, F.J.; As, van H.

    2002-01-01

    Functional magnetic resonance imaging was used to study transients of biophysical parameters in a cucumber plant in response to environmental changes. Detailed flow imaging experiments showed the location of xylem and phloem in the stem and the response of the following flow characteristics to the

  2. Importance of prumycin produced by Bacillus amyloliquefaciens SD-32 in biocontrol against cucumber powdery mildew disease.

    Science.gov (United States)

    Tanaka, Keijitsu; Fukuda, Mutsumi; Amaki, Yusuke; Sakaguchi, Takatoshi; Inai, Koji; Ishihara, Atsushi; Nakajima, Hiromitsu

    2017-05-30

    Powdery mildew disease of cucurbits is caused mainly by Podosphaera fusca, which is one of the most important limiting factors in cucurbit production worldwide. Previously we reported that Bacillus amyloliquefaciens biocontrol strain SD-32 produces C17 bacillomycin D and [Ile]surfactin, and that these metabolites play important roles in SD-32's biocontrol over cucumber gray mold disease. Our further investigation demonstrated that the culture broth and its supernatant suppressed cucumber powdery mildew disease in greenhouse experiments. However, the active principle(s) remained unknown. The active compound was isolated from the culture supernatant after anti-powdery mildew disease activity-guided purification and identified as prumycin. Prumycin significantly suppressed the disease, whereas bacillomycin D and [Ile]surfactin did not. Prumycin did not induce the expression of plant defense genes (PR1a and VSP1), suggesting that it does not act via plant defense response. Light microscopic observations of prumycin-treated cucumber cotyledon suggested that prumycin inhibits the conidial germination of P. fusca. This study demonstrates that prumycin is a major factor in SD-32's suppression of cucumber powdery mildew disease. Our findings shed light for the first time on prumycin's role in biocontrol by Bacillus against this disease. © 2017 Society of Chemical Industry. © 2017 Society of Chemical Industry.

  3. An ecological cost of plant defence : attractiveness of bitter cucumber plants to natural enemies of herbivores

    NARCIS (Netherlands)

    Agrawal, A.A.; Janssen, A.; Bruin, J.; Posthumus, M.A.; Sabelis, M.W.

    2002-01-01

    Plants produce defences that act directly on herbivores and indirectly via the attraction of natural enemies of herbivores. We examined the pleiotropic effects of direct chemical defence production on indirect defence employing near-isogenic varieties of cucumber plants (Cucumis sativus) that differ

  4. In Vitro Auxin Binding to Cellular Membranes of Cucumber Fruits 123

    Science.gov (United States)

    Narayanan, Komaratchi R.; Mudge, Kenneth W.; Poovaiah, B. W.

    1981-01-01

    Specific binding of 1-naphthaleneacetic acid (NAA) to crude membrane preparations from cucumber (Cucumis sativus L.) was demonstrated. This in vitro binding had a pH optimum of 3.75 and an equilibrium dissociation constant of 10 to 20 micromolar with 1250 picomoles binding sites per gram fresh weight. The NAA-binding sites were pronase sensitive. The supernatant from the fruit partially inhibited the in vitro NAA binding to fruit membranes. NAA, 2-naphthoxyacetic acid, 3-indoleacetic acid, 2-4-dichlorophenoxyacetic acid, and 2,3,5-triiodobenzoic acid, which are reported to be very good inducers of parthenocarpy in cucumber, showed a high degree of specific binding to cucumber fruit membranes. In comparison, 2-naphthaleneacetic acid and indolepropionic acid, which are reported to be very weak auxins in corn coleoptile, pea stem, and strawberry fruit growth bioassays, did not bind efficiently to cucumber fruit membranes. In vitro binding studies with fruit membranes suggest that auxin stimulated fruit growth may be mediated by membrane-associated, auxin-binding protein(s). PMID:16661764

  5. What is the most prominent factor limiting photosynthesis in different layers of a greenhouse cucumber canopy?

    NARCIS (Netherlands)

    Chen, T.W.; Henke, M.; Visser, de P.H.B.; Buck-Sorlin, G.H.; Wiechers, D.; Kahlen, K.; Stützel, H.

    2014-01-01

    Background and Aims Maximizing photosynthesis at the canopy level is important for enhancing crop yield, and this requires insights into the limiting factors of photosynthesis. Using greenhouse cucumber (Cucumis sativus) as an example, this study provides a novel approach to quantify different compo

  6. Occurence of Cucumber Mosaic Virus in Ornamental Plants and Perspectives of Transgenic Control

    NARCIS (Netherlands)

    Chen, Y.K.

    2003-01-01

    This thesis described the characterization of a range of ornamental-infecting Cucumber mosaic virus strains and the development of novel transgene constructs to improve the efficiency of obtaining resistant transformants which is essential for most ornamental plants that are

  7. An autonomous robot for de-leafing cucumber plants in a high-wire cultivation system

    NARCIS (Netherlands)

    Henten, van E.J.; Tuijl, van B.A.J.; Hoogakker, G.J.; Weerd, van der M.J.; Hemming, J.; Kornet, J.G.; Bontsema, J.

    2005-01-01

    The paper presents an autonomous robot for removing the leaves from cucumber plants grown in a high-wire cultivation system. Leaves at the lower end of the plants are removed because of their reduced vitality, their negligible contribution to canopy photosynthesis and their increased sensitivity for

  8. Comparison of Physicochemical Characteristics and Anticoagulant Activities of Polysaccharides from Three Sea Cucumbers

    Directory of Open Access Journals (Sweden)

    Shengmin Wang

    2013-02-01

    Full Text Available In order to search for sulfated polysaccharides in different invertebrate connective tissues and to examine their biological activities, we have isolated three types of polysaccharides from the body wall of the three sea cucumbers Holothuria edulis, Apostichopus japonicas and Holothuria nobilis. The physicochemical properties and anticoagulant activities of these polysaccharides were examined and compared. The chemical composition analysis and nuclear magnetic resonance (NMR analysis indicate that two types of polysaccharides, sulfated fucan and fucosylated chondroitin sulfate (FuCS, were found in all of the three species and in addition a neutral glycan was observed in H. edulis. The neutral α-glucan was firstly obtained from sea cucumber. The same type of polysaccharides from different species of sea cucumbers have similar physicochemical properties and anticoagulant activities, but those of different types of glycans are significantly different, possibly due to their different monosaccharide compositions, electric charges and average molecular weights. The FuCSs have stronger anticoagulant activities than the sulfated fucans, although the molecular sizes of the FuCSs are lower than those of the sulfated fucans, whereas the neutral glucan has no activity, as expected from the absence of sulfate. Thus, anticoagulant activities of the different type of polysaccharides are likely to relate to monosaccharide composition and sulfate content. Preliminary analysis suggests that the sulfation patterns of the FuCSs may result in the difference in anticoagulant activities. Our data could help elucidate the structure-activity relationship of the sea cucumber polysaccharides.

  9. Comparison of physicochemical characteristics and anticoagulant activities of polysaccharides from three sea cucumbers.

    Science.gov (United States)

    Luo, Lan; Wu, Mingyi; Xu, Li; Lian, Wu; Xiang, Jingying; Lu, Feng; Gao, Na; Xiao, Chuang; Wang, Shengmin; Zhao, Jinhua

    2013-02-05

    In order to search for sulfated polysaccharides in different invertebrate connective tissues and to examine their biological activities, we have isolated three types of polysaccharides from the body wall of the three sea cucumbers Holothuria edulis, Apostichopus japonicas and Holothuria nobilis. The physicochemical properties and anticoagulant activities of these polysaccharides were examined and compared. The chemical composition analysis and nuclear magnetic resonance (NMR) analysis indicate that two types of polysaccharides, sulfated fucan and fucosylated chondroitin sulfate (FuCS), were found in all of the three species and in addition a neutral glycan was observed in H. edulis. The neutral α-glucan was firstly obtained from sea cucumber. The same type of polysaccharides from different species of sea cucumbers have similar physicochemical properties and anticoagulant activities, but those of different types of glycans are significantly different, possibly due to their different monosaccharide compositions, electric charges and average molecular weights. The FuCSs have stronger anticoagulant activities than the sulfated fucans, although the molecular sizes of the FuCSs are lower than those of the sulfated fucans, whereas the neutral glucan has no activity, as expected from the absence of sulfate. Thus, anticoagulant activities of the different type of polysaccharides are likely to relate to monosaccharide composition and sulfate content. Preliminary analysis suggests that the sulfation patterns of the FuCSs may result in the difference in anticoagulant activities. Our data could help elucidate the structure-activity relationship of the sea cucumber polysaccharides.

  10. Efficacy of Fluensulfone in a Tomato–Cucumber Double Cropping System

    Science.gov (United States)

    Morris, Kelly A.; Langston, David B.; Dickson, Donald W.; Davis, Richard F.; Timper, Patricia; Noe, James P.

    2015-01-01

    Vegetable crops in the southeastern United States are commonly grown on plastic mulch with two crop cycles produced on a single mulch application. Field trials were conducted in 2013 and 2014 in two locations to evaluate the efficacy of fluensulfone for controlling Meloidogyne spp. when applied through drip irrigation to cucumber in a tomato–cucumber double-cropping system. In the spring tomato crop, 1,3-dichloropropene (1,3-D), fluensulfone, and a resistant cultivar significantly decreased root galling by 91%, 73%, and 97%, respectively, compared to the untreated control. Tomato plots from the spring were divided into split plots for the fall where the main plots were the spring treatment and the subplots were cucumber either treated with fluensulfone (3.0 kg a.i./ha. via drip irrigation) or left untreated. The fall application of fluensulfone improved cucumber vigor and reduced gall ratings compared to untreated subplots. Fluensulfone reduced damage from root-knot nematodes when applied to the first crop as well as provided additional protection to the second crop when it was applied through a drip system. PMID:26941459

  11. Metagenomic Analysis of Cucumber RNA from East Timor Reveals an Aphid lethal paralysis virus Genome

    Science.gov (United States)

    Maina, Solomon; Edwards, Owain R.; de Almeida, Luis; Ximenes, Abel

    2017-01-01

    ABSTRACT We present here the first complete genomic Aphid lethal paralysis virus (ALPV) sequence isolated from cucumber plant RNA from East Timor. We compare it with two complete ALPV genome sequences from China, and one each from Israel, South Africa, and the United States. It most closely resembled the Chinese isolate LGH genome. PMID:28082492

  12. Soil respiration in cucumber field under crop rotation in solar greenhouse

    Directory of Open Access Journals (Sweden)

    Yinli Liang

    2014-08-01

    Full Text Available Crop residues are the primary source of carbon input in the soil carbon pool. Crop rotation can impact the plant biomass returned to the soil, and influence soil respiration. To study the effect of previous crops on soil respiration in cucumber (Cucumis statirus L. fields in solar greenhouses, soil respiration, plant height, leaf area and yield were measured during the growing season (from the end of Sept to the beginning of Jun the following year from 2007 to 2010. The cucumber was grown following fallow (CK, kidney bean (KB, cowpea (CP, maize for green manure (MGM, black bean for green manure (BGM, tomato (TM, bok choy (BC. As compared with CK, KB, CP, MGM and BGM may increase soil respiration, while TM and BC may decrease soil respiration at full fruit stage in cucumber fields. Thus attention to the previous crop arrangement is a possible way of mitigating soil respiration in vegetable fields. Plant height, leaf area and yield had similar variation trends under seven previous crop treatments. The ratio of yield to soil respiration revealed that MGM is the crop of choice previous to cucumber when compared with CK, KB, CP, BGM, TM and BC.

  13. Influence of activated charcoal amendment to contaminated soil on dieldrin and nutrient uptake by cucumbers

    Energy Technology Data Exchange (ETDEWEB)

    Hilber, Isabel [Research Institute of Organic Agriculture, Ackerstrasse, CH-5070 Frick (Switzerland); Wyss, Gabriela S., E-mail: gabriela.wyss@fibl.or [Research Institute of Organic Agriculture, Ackerstrasse, CH-5070 Frick (Switzerland); Maeder, Paul [Research Institute of Organic Agriculture, Ackerstrasse, CH-5070 Frick (Switzerland); Bucheli, Thomas D. [Agroscope Reckenholz-Taenikon Research Station ART, Reckenholzstr. 191, CH-8046 Zuerich (Switzerland); Meier, Isabel; Vogt, Lea; Schulin, Rainer [Institute of Terrestrial Ecosystems, ETH Zuerich, Universitaetstr. 16, CH-8092 Zuerich (Switzerland)

    2009-08-15

    Activated charcoal (AC) amendments have been suggested as a promising, cost-effective method to immobilize organic contaminants in soil. We performed pot experiments over two years with cucumber (Cucumis sativus L.) grown in agricultural soil with 0.07 mg kg{sup -1} of weathered dieldrin and 0, 200, 400, and 800 mg AC per kg soil. Dieldrin fresh weight concentrations in cucumber fruits were significantly reduced from 0.012 to an average of 0.004 mg kg{sup -1}, and total uptake from 2 to 1 mug in the 800 mg kg{sup -1} AC treatment compared to the untreated soil. The treatment effects differed considerably between the two years, due to different meteorological conditions. AC soil treatments did neither affect the availability of nutrients to the cucumber plants nor their yield (total fruit wet weight per pot). Thus, some important prerequisites for the successful application of AC amendments to immobilize organic pollutants in agricultural soils can be considered fulfilled. - The addition of activated charcoal to soil reduced dieldrin residues in cucumbers and did not affect nutrients availability.

  14. Studies on the diversity and growth of moulds in the cucumber pickle

    Directory of Open Access Journals (Sweden)

    RATNA SETYANINGSIH

    2003-07-01

    Full Text Available The aims of this research were to study about the growth and diversity of moulds in the cucumber pickle and the influences of acetic acid concentration and long storage as well as additional of onion on the growth of moulds. Cucumber pickle was treated in different acetic acid concentrations (0,8%, 1,4%, 2,0%, long storage and with or without additional of onion. The used method to isolate of mould was dilution planting. For enumerating moulds, 0,1 ml samples were blended and diluted after that inoculated on to potato sucrose agar (PSA medium and then incubated at 270C for 7 days. To identify the moulds, the colony was transferred on to CDA and PSA media, and then incubated at 270C for 7 days. The moulds were identified according to their macroscopic and microscopic characters. To know the degrees of taste, the cucumber pickle was tested to 25 people with hedonic scale method. The results showed that, there was 12 different kinds of moulds can be found in cucumber pickle without additional of onion. There were Aspergillus fumigatus, A. niger, A. ochraceus, A. tamarii Kita, Cochliobolus sp, Botrytis, Penicillium chrysogenum, P. expansum, P. citrinum, Rhizopus oligosporus, Trichoderma sp, and Monilia. On the other hand, experiment with onion, P. expansum and A. niger could not be observed. The highest varieties of moulds can be found in cucumber pickle with acetic acid concentration 1,4%. In experiment without onion, on nil (0 day, with acetic acid concentration of 1,4%, the amount of moulds is lower than in the pickle with acetic acid concentration 0,8%. The diversity of moulds in the cucumber pickle with additional of onion is lower than that of without onion. The additional of onion showed decreasing the diversity and growth of moulds in cucumber pickle with acetic acid concentration of 0,8% on nil (0 day. In experiment with acetic acid concentration 2,0% in 10-1 dilution on nil (0 day until 6th day, the moulds could not be observed.

  15. Transcriptome sequencing and comparative analysis of cucumber flowers with different sex types

    Directory of Open Access Journals (Sweden)

    Sobral Bruno W

    2010-06-01

    Full Text Available Abstract Background Cucumber, Cucumis sativus L., is an economically and nutritionally important crop of the Cucurbitaceae family and has long served as a primary model system for sex determination studies. Recently, the sequencing of its whole genome has been completed. However, transcriptome information of this species is still scarce, with a total of around 8,000 Expressed Sequence Tag (EST and mRNA sequences currently available in GenBank. In order to gain more insights into molecular mechanisms of plant sex determination and provide the community a functional genomics resource that will facilitate cucurbit research and breeding, we performed transcriptome sequencing of cucumber flower buds of two near-isogenic lines, WI1983G, a gynoecious plant which bears only pistillate flowers, and WI1983H, a hermaphroditic plant which bears only bisexual flowers. Result Using Roche-454 massive parallel pyrosequencing technology, we generated a total of 353,941 high quality EST sequences with an average length of 175bp, among which 188,255 were from gynoecious flowers and 165,686 from hermaphroditic flowers. These EST sequences, together with ~5,600 high quality cucumber EST and mRNA sequences available in GenBank, were clustered and assembled into 81,401 unigenes, of which 28,452 were contigs and 52,949 were singletons. The unigenes and ESTs were further mapped to the cucumber genome and more than 500 alternative splicing events were identified in 443 cucumber genes. The unigenes were further functionally annotated by comparing their sequences to different protein and functional domain databases and assigned with Gene Ontology (GO terms. A biochemical pathway database containing 343 predicted pathways was also created based on the annotations of the unigenes. Digital expression analysis identified ~200 differentially expressed genes between flowers of WI1983G and WI1983H and provided novel insights into molecular mechanisms of plant sex determination

  16. Tunable EMI noise suppressor based on Ni nanowire arrays

    Energy Technology Data Exchange (ETDEWEB)

    Sharma, Monika, E-mail: monikasharma1604@gmail.com [Centre for Applied Research in Electronics, Indian Institute of Technology Delhi, New Delhi (India); Kuanr, Bijoy K. [Special Centre for Nanoscience, Jawaharlal Nehru University, New Delhi (India); Sharma, Manish; Basu, Ananjan [Centre for Applied Research in Electronics, Indian Institute of Technology Delhi, New Delhi (India)

    2014-09-01

    We designed, fabricated and evaluated noise suppressors based on Ni nanowire arrays embedded in Anodic Aluminum Oxide (AAO) template in microstrip waveguide geometry. The effects of the length of the nanowires and the device dimensions on the microwave properties of noise suppressor are investigated. Ni nanowires with an average diameter of 200 nm and of various lengths (from 7 µm to 30 µm) were electrodeposited in AAO templates. Scanning electron microscope showed growth of highly ordered nanowires and Energy Dispersive X-ray analysis confirmed composition of nanowires. Transmission electron microscope verified the diameter and length of the deposited nanowires. The resonance frequency of the noise suppressor can be tuned up to 23 GHz by applying an external magnetic field of 4.5 kOe. This gives a frequency tunability of 66%. Signal attenuation of the device enhances by increasing the bias magnetic field by over 60% and microstrip length by 20%. Therefore such integrated devices are good electromagnetic noise suppressors in wireless communication.

  17. Suppressors of DnaAATP imposed overinitiation in Escherichia coli

    DEFF Research Database (Denmark)

    Charbon, Godefroid; Riber, Leise; Cohen, Malene

    2011-01-01

    Chromosome replication in Escherichia coli is limited by the supply of DnaA associated with ATP. Cells deficient in RIDA (Regulatory Inactivation of DnaA) due to a deletion of the hda gene accumulate suppressor mutations (hsm) to counteract the overinitiation caused by an elevated DnaAATP level...

  18. A genome wide dosage suppressor network reveals genomic robustness

    Science.gov (United States)

    Patra, Biranchi; Kon, Yoshiko; Yadav, Gitanjali; Sevold, Anthony W.; Frumkin, Jesse P.; Vallabhajosyula, Ravishankar R.; Hintze, Arend; Østman, Bjørn; Schossau, Jory; Bhan, Ashish; Marzolf, Bruz; Tamashiro, Jenna K.; Kaur, Amardeep; Baliga, Nitin S.; Grayhack, Elizabeth J.; Adami, Christoph; Galas, David J.; Raval, Alpan; Phizicky, Eric M.; Ray, Animesh

    2017-01-01

    Genomic robustness is the extent to which an organism has evolved to withstand the effects of deleterious mutations. We explored the extent of genomic robustness in budding yeast by genome wide dosage suppressor analysis of 53 conditional lethal mutations in cell division cycle and RNA synthesis related genes, revealing 660 suppressor interactions of which 642 are novel. This collection has several distinctive features, including high co-occurrence of mutant-suppressor pairs within protein modules, highly correlated functions between the pairs and higher diversity of functions among the co-suppressors than previously observed. Dosage suppression of essential genes encoding RNA polymerase subunits and chromosome cohesion complex suggests a surprising degree of functional plasticity of macromolecular complexes, and the existence of numerous degenerate pathways for circumventing the effects of potentially lethal mutations. These results imply that organisms and cancer are likely able to exploit the genomic robustness properties, due the persistence of cryptic gene and pathway functions, to generate variation and adapt to selective pressures. PMID:27899637

  19. Electrodialytic membrane suppressors for ion chromatography make programmable buffer generators.

    Science.gov (United States)

    Chen, Yongjing; Srinivasan, Kannan; Dasgupta, Purnendu K

    2012-01-01

    The use of buffer solutions is immensely important in a great variety of disciplines. The generation of continuous pH gradients in flow systems plays an important role in the chromatographic separation of proteins, high-throughput pK(a) determinations, etc. We demonstrate here that electrodialytic membrane suppressors used in ion chromatography can be used to generate buffers. The generated pH, computed from first principles, agrees well with measured values. We demonstrate the generation of phosphate and citrate buffers using a cation-exchange membrane (CEM) -based anion suppressor and Tris and ethylenediamine buffers using an anion-exchange membrane (AEM) -based cation suppressor. Using a mixture of phosphate, citrate, and borate as the buffering ions and using a CEM suppressor, we demonstrate the generation of a highly reproducible (avg RSD 0.20%, n = 3), temporally linear (pH 3.0-11.9, r(2) > 0.9996), electrically controlled pH gradient. With butylamine and a large concentration (0.5 M) of added NaCl, we demonstrate a similar linear pH gradient of large range with a near-constant ionic strength. We believe that this approach will be of value for the generation of eluents in the separation of proteins and other biomolecules and in online process titrations.

  20. "Ring-fencing" BRCA1 tumor suppressor activity.

    Science.gov (United States)

    Patel, Ketan J; Crossan, Gerry P; Hodskinson, Michael R G

    2011-12-13

    BRCA1 is a crucial human breast and ovarian cancer tumor suppressor gene. The article by Drost et al. in this issue of Cancer Cell together with a recent paper in Science now provide a clearer picture of how this large and complex protein suppresses tumorigenesis.

  1. 黄瓜涂膜保鲜试验的研究%Cucumber Film Preservation Trials

    Institute of Scientific and Technical Information of China (English)

    李娟; 魏春红

    2012-01-01

    This paper adopts potato starch as the raw material,adding different auxiliary agents made into the film Fresh keeping agent,at normal temperature of cucumber on film preservation,periodically cucumber physiological and biochemical indexes,which can get the potato starch of cucumber Fresh keeping agent film the best effective formula,through to the potato single factor experiment,the results of their study:the effect of cucumber sa fresh preservation ratio for the best in 100mL water calcium chloride 5g,glycerin lmL,potato starch is 4g,sodium alginate 2g,get the cucumber water loss rate lowest,hardness keeps best and Vc content is the highest.%以马铃薯淀粉为原料,添加不同的辅助剂配制成涂膜保鲜剂,在常温下对黄瓜进行涂膜保鲜,定期检测黄瓜生理生化指标,从而获得马铃薯淀粉对黄瓜涂膜保鲜剂的最佳有效配方,马铃薯的单因素试验结果:对黄瓜保鲜效果最佳的涂膜剂保鲜配比为每100mL水中含氯化钙5 g、甘油1mL、马铃薯淀粉量4g、海藻酸钠2g,此时获得的黄瓜失水率最低、硬度保持最好和VC含量最高.

  2. The Different Physiological and Antioxidative Responses of Zucchini and Cucumber to Sewage Sludge Application.

    Directory of Open Access Journals (Sweden)

    Anna Wyrwicka

    Full Text Available The present study investigates the effect of soil amended with sewage sludge on oxidative changes in zucchini and cucumber plants (Cucurbitaceae and the consequent activation of their antioxidative systems and detoxification mechanisms. The plants were grown in pots containing soil amended with three concentrations of sewage sludge (1.8 g, 5.4 g and 10.8 g per pot, while controls were potted with vegetable soil. The activities of three antioxidative enzymes, ascorbate peroxidase (APx, catalase (CAT and guaiacol peroxidase (POx, were assessed, as well as of the detoxifying enzyme S-glutathione transferase (GST. Lipid peroxidation was evaluated by measuring the extent of oxidative damage; α-tocopherol content, the main lipophilic antioxidant, was also measured. Visible symptoms of leaf blade damage after sewage sludge application occurred only on the zucchini plants. The zucchini and cucumber plants showed a range of enzymatic antioxidant responses to sewage sludge application. While APx and POx activities increased significantly with increasing sludge concentration in the zucchini plants, they decreased in the cucumber plants. Moreover, although the activity of these enzymes increased gradually with increasing doses of sewage sludge, these levels fell at the highest dose. An inverse relationship between peroxidases activity and CAT activity was observed in both investigated plant species. In contrast, although GST activity increased progressively with sludge concentration in both the zucchini and cucumber leaves, the increase in GST activity was greater in the zucchini plants, being visible at the lowest dose used. The results indicate that signs of sewage sludge toxicity were greater in zucchini than cucumber, and its defense reactions were mainly associated with increases in APx, POx and GST activity.

  3. Colorimetric detection of Cucumber green mottle mosaic virus using unmodified gold nanoparticles as colorimetric probes.

    Science.gov (United States)

    Wang, Lin; Liu, Zhanmin; Xia, Xueying; Yang, Cuiyun; Huang, Junyi; Wan, Sibao

    2017-05-01

    Cucumber green mottle mosaic virus (CGMMV)causes a severe mosaic symptom of watermelon and cucumber, and can be transmitted via infected cucumber seeds, leaves and soil. It remains a challenge to detect this virus to prevent its introduction and infection and spread in fields. For this purpose, a simple and sensitive label-free colorimetric detection method for CGMMV has been developed with unmodified gold nanoparticles (AuNPs) as colorimetric probes. The method is based on the finding that the presence of RT-PCR target products of CGMMV and species-specific probes results in color change of AuNPs from red to blue after NaCl induction. Normally, species-specific probes attach to the surface of AuNPs and thereby increasing their resistance to NaCl-induced aggregation. The concentration of sodium, probes in the reaction system and evaluation of specificity and sensitivity of a novel assay, visual detection of Cucumber green mottle mosaic virus using unmodified AuNPs has been carried out with simple preparation of samples in our study. Through this assay, as low as 30pg/μL of CGMMV RNA was thus detected visually, by the naked eye, without the need for any sophisticated, expensive instrumentation and biochemical reagents. The specificity was 100% and exhibited good reproducibility in our assays. The results note that this assay is highly species-specific, simple, low-cost, and visual for easy detection of CGMMV in plant tissues. Therefore, visual assay is a potentially useful tool for middle or small-scales corporations and entry-exit inspection and quarantine bureau to detect CGMMV in cucumber seeds or plant tissues.

  4. Development of fatty acid biomarkers for the identification of wild and aquacultured sea cucumber ( Apostichopus japonicus)

    Science.gov (United States)

    Zadorozhnyj, P. A.; Pivnenko, T. N.; Kovalev, N. N.

    2016-02-01

    In this study, the fatty acids (FAs) of the organs and tissues of sea cucumber ( Apostichopus japonicus) were profiled in order to compare the FA composition of sea cucumber collected from natural habitat (wild) and cages (cultured). The differences in FA contents in dermomuscular tube, peripharyngeal annulus, gonad and intestine (with or without content) between the wild and the cultured were determined. The main fatty acids in all organs and tissues were 20:5n-3, 16:1n-7, 20:4n-6, 22:6n-3, 18:0, and 18:1n-7. The basically different FAs of body wall and digestive tube were 16:1n-7, 18:1n-9 and 20:1n-11. The ratio of saturated to mono- and polyunsaturated FAs in digestive tube was independent on inside content while there was a redistribution of the total amount of n-3 and n-6 fatty acids. The comparison of FA composition of the wild and the cultured sea cucumber showed that 20:5n-3, 16:1n-7 and 18:1n-7 predominated the wild while 20:4n-6 predominated the cultured. The content of branched-chain fatty acids in the wild was 3%-4% and about 9% in the cultured. The possible FAs for identifying the wild and the cultured sea cucumbers were selected. It was suggested that the indexes such as the ratio of either (n-3:n-6) to (n-7:n-6) or (n-3) + (n-7) to (n-6) may serve as the biomarkers distinguishing the wild and the cultured sea cucumber.

  5. Identification of fucans from four species of sea cucumber by high temperature 1H NMR

    Science.gov (United States)

    Wu, Nian; Chen, Shiguo; Ye, Xingqian; Li, Guoyun; Yin, Li'ang; Xue, Changhu

    2014-10-01

    Acidic polysaccharide, which has various biological activities, is one of the most important components of sea cucumber. In the present study, crude polysaccharide was extracted from four species of sea cucumber from three different geographical zones, Pearsonothuria graeffei ( Pg) from Indo-Pacific, Holothuria vagabunda ( Hv) from Norwegian Coast, Stichopus tremulu ( St) from Western Indian Ocean, and Isostichopus badionotu ( Ib) from Western Atlantic. The polysaccharide extract was separated and purified with a cellulose DEAE anion-exchange column to obtain corresponding sea cucumber fucans (SC-Fucs). The chemical property of these SC-Fucs, including molecular weight, monosaccharide composition and sulfate content, was determined. Their structure was compared simply with fourier infrared spectrum analyzer and identified with high temperature 1H nuclear magnetic resonance spectrum analyzer (NMR) and room temperature 13C NMR. The results indicated that Fuc- Pg obtained from the torrid zone mainly contained 2,4-O-disulfated and non-sulfated fucose residue, whereas Fuc- Ib from the temperate zone contained non-, 2-O- and 2,4-O-disulfated fucose residue; Fuc- St from the frigid zone and Fuc- Hv from the torrid zone contained mainly non-sulfated fucose residue. The proton of SC-Fucs was better resolved via high temperature 1H NMR than via room temperature 1H NMR. The fingerprint of sea cucumber in different sea regions was established based on the index of anomer hydrogen signal in SC-Fucs. Further work will help to understand whether there exists a close relationship between the geographical area of sea cucumber and the sulfation pattern of SC-Fucs.

  6. Roles of auxin transport and action in the gravity-regulated morphogenesis of cucumber seedlings

    Science.gov (United States)

    Saito, Y.; Shimizu, M.; Hotta, T.; Dai-Hee, K.; Yanai, K.; Kamada, M.; Fujii, N.; Miyazawa, Y.; Takahashi, H.

    Cucumber Cucumis sativus L seedlings develop a specialized protuberance peg on the lower side of the transition zone between the hypocotyl and the root when seeds germinate in a horizontal position The peg plays an important role in pulling seedling out from the seed coat We have reported that cucumber seedlings potentially develop a peg on each side of the transition zone but peg development on the upper side is suppressed in response to gravity Auxin is the primary factor responsible for the induction or the suppression of peg formation Here we investigated the roles of auxin transport and action in the gravity-regulated formation suppression of the peg in cucumber seedlings When cucumber seedlings were treated with inhibitors of auxin efflux carrier a peg was formed not only on the lower side but also on the upper side of the gravistimulated transition zone suggesting that activation of auxin efflux carriers is required for the suppression of peg formation To identify auxin efflux carriers involved in the suppression of peg formation by graviresponse we isolated six cucumber cDNAs of PIN auxin efflux carrier genes and investigated their mRNA accumulation and protein expression Our results show that CsPIN1 and CsPIN6 could play a role in the redistribution of auxin in the transition zone To understand auxin action on peg formation suppression we next examined the transcriptional regulators for the expressions of auxin-responsive genes The results suggest that a higher level of auxin in the lower side of the

  7. The Different Physiological and Antioxidative Responses of Zucchini and Cucumber to Sewage Sludge Application.

    Science.gov (United States)

    Wyrwicka, Anna; Urbaniak, Magdalena

    2016-01-01

    The present study investigates the effect of soil amended with sewage sludge on oxidative changes in zucchini and cucumber plants (Cucurbitaceae) and the consequent activation of their antioxidative systems and detoxification mechanisms. The plants were grown in pots containing soil amended with three concentrations of sewage sludge (1.8 g, 5.4 g and 10.8 g per pot), while controls were potted with vegetable soil. The activities of three antioxidative enzymes, ascorbate peroxidase (APx), catalase (CAT) and guaiacol peroxidase (POx), were assessed, as well as of the detoxifying enzyme S-glutathione transferase (GST). Lipid peroxidation was evaluated by measuring the extent of oxidative damage; α-tocopherol content, the main lipophilic antioxidant, was also measured. Visible symptoms of leaf blade damage after sewage sludge application occurred only on the zucchini plants. The zucchini and cucumber plants showed a range of enzymatic antioxidant responses to sewage sludge application. While APx and POx activities increased significantly with increasing sludge concentration in the zucchini plants, they decreased in the cucumber plants. Moreover, although the activity of these enzymes increased gradually with increasing doses of sewage sludge, these levels fell at the highest dose. An inverse relationship between peroxidases activity and CAT activity was observed in both investigated plant species. In contrast, although GST activity increased progressively with sludge concentration in both the zucchini and cucumber leaves, the increase in GST activity was greater in the zucchini plants, being visible at the lowest dose used. The results indicate that signs of sewage sludge toxicity were greater in zucchini than cucumber, and its defense reactions were mainly associated with increases in APx, POx and GST activity.

  8. The Different Physiological and Antioxidative Responses of Zucchini and Cucumber to Sewage Sludge Application

    Science.gov (United States)

    Wyrwicka, Anna; Urbaniak, Magdalena

    2016-01-01

    The present study investigates the effect of soil amended with sewage sludge on oxidative changes in zucchini and cucumber plants (Cucurbitaceae) and the consequent activation of their antioxidative systems and detoxification mechanisms. The plants were grown in pots containing soil amended with three concentrations of sewage sludge (1.8 g, 5.4 g and 10.8 g per pot), while controls were potted with vegetable soil. The activities of three antioxidative enzymes, ascorbate peroxidase (APx), catalase (CAT) and guaiacol peroxidase (POx), were assessed, as well as of the detoxifying enzyme S-glutathione transferase (GST). Lipid peroxidation was evaluated by measuring the extent of oxidative damage; α-tocopherol content, the main lipophilic antioxidant, was also measured. Visible symptoms of leaf blade damage after sewage sludge application occurred only on the zucchini plants. The zucchini and cucumber plants showed a range of enzymatic antioxidant responses to sewage sludge application. While APx and POx activities increased significantly with increasing sludge concentration in the zucchini plants, they decreased in the cucumber plants. Moreover, although the activity of these enzymes increased gradually with increasing doses of sewage sludge, these levels fell at the highest dose. An inverse relationship between peroxidases activity and CAT activity was observed in both investigated plant species. In contrast, although GST activity increased progressively with sludge concentration in both the zucchini and cucumber leaves, the increase in GST activity was greater in the zucchini plants, being visible at the lowest dose used. The results indicate that signs of sewage sludge toxicity were greater in zucchini than cucumber, and its defense reactions were mainly associated with increases in APx, POx and GST activity. PMID:27327659

  9. Comparative transcriptome analysis of papilla and skin in the sea cucumber, Apostichopus japonicus

    Directory of Open Access Journals (Sweden)

    Xiaoxu Zhou

    2016-03-01

    Full Text Available Papilla and skin are two important organs of the sea cucumber. Both tissues have ectodermic origin, but they are morphologically and functionally very different. In the present study, we performed comparative transcriptome analysis of the papilla and skin from the sea cucumber (Apostichopus japonicus in order to identify and characterize gene expression profiles by using RNA-Seq technology. We generated 30.6 and 36.4 million clean reads from the papilla and skin and de novo assembled in 156,501 transcripts. The Gene Ontology (GO analysis indicated that cell part, metabolic process and catalytic activity were the most abundant GO category in cell component, biological process and molecular funcation, respectively. Comparative transcriptome analysis between the papilla and skin allowed the identification of 1,059 differentially expressed genes, of which 739 genes were expressed at higher levels in papilla, while 320 were expressed at higher levels in skin. In addition, 236 differentially expressed unigenes were not annotated with any database, 160 of which were apparently expressed at higher levels in papilla, 76 were expressed at higher levels in skin. We identified a total of 288 papilla-specific genes, 171 skin-specific genes and 600 co-expressed genes. Also, 40 genes in papilla-specific were not annotated with any database, 2 in skin-specific. Development-related genes were also enriched, such as fibroblast growth factor, transforming growth factor-β, collagen-α2 and Integrin-α2, which may be related to the formation of the papilla and skin in sea cucumber. Further pathway analysis identified ten KEGG pathways that were differently enriched between the papilla and skin. The findings on expression profiles between two key organs of the sea cucumber should be valuable to reveal molecular mechanisms involved in the development of organs that are related but with morphological differences in the sea cucumber.

  10. A bench-scale, cost effective and simple method to elicit Lycopersicon esculentum cv. PKM1 (tomato) plants against Cucumber mosaic virus attack using ozone-mediated inactivated Cucumber mosaic virus inoculum.

    Science.gov (United States)

    Sudhakar, N; Nagendra-Prasad, D; Mohan, N; Murugesan, K

    2007-12-01

    Studies were undertaken to evaluate ozone for inactivation of Cucumber mosaic virus present in the inoculum and to stimulate Lycopersicon esculentum cv. PKM1 (tomato) plants against Cucumber mosaic virus infection by using the inactivated Cucumber mosaic virus inoculum. Application of a T(4) (0.4mg/l) concentration of ozone to the inoculum containing Cucumber mosaic virus resulted in complete inactivation of the virus. The inactivated viral inoculum was mixed with a penetrator (delivery agent), referred to as T(4) preparation, and it was evaluated for the development of systemic acquired resistance in the tomato plants. Application of a T(4) preparation 5 days before inoculation with the Cucumber mosaic virus protected tomato plants from the effects of Cucumber mosaic virus. Among the components of the inactivated virus tested, coat protein subunits and aggregates were responsible for the acquired resistance in tomato plants. In field trials, the results of enzyme-linked immunosorbent assay revealed that, Cucumber mosaic virus accumulation was significantly less for all the test plants (16%) sprayed with the T(4) preparation than untreated control plants (89.5%) at 28 days postinoculation (dpi). A remarkable increase in the activities of the total soluble phenolics (10-fold) and salicylic acid (16-fold) was detected 5 days after the treatment in foliar extracts of test plants relative to untreated control plants. The results showed that treatment of tomato plants with inactivated viral inoculum led to a significant enhancement of protection against Cucumber mosaic virus attack in a manner that mimics a real pathogen and induces systemic acquired resistance.

  11. Multiplexed Methylation Profiles of Tumor Suppressor Genes in Bladder Cancer

    Science.gov (United States)

    Cabello, Maria José; Grau, Laura; Franco, Noreli; Orenes, Esteban; Alvarez, Miguel; Blanca, Ana; Heredero, Oscar; Palacios, Alberto; Urrutia, Manuel; Fernández, Jesus María; López-Beltrán, Antonio; Sánchez-Carbayo, Marta

    2011-01-01

    Changes in DNA methylation of tumor suppressors can occur early in carcinogenesis and are potentially important early indicators of cancer. The objective of this study was to assess the methylation of 25 tumor suppressor genes in bladder cancer using a methylation-specific (MS) multiplex ligation-dependent probe amplification assay (MLPA). Initial analyses in bladder cancer cell lines (n = 14) and fresh-frozen primary bladder tumor specimens (n = 31) supported the panel of genes selected being altered in bladder cancer. The process of MS-MLPA was optimized for its application in body fluids using two independent training and validation sets of urinary specimens (n = 146), including patients with bladder cancer (n = 96) and controls (n = 50). BRCA1 (71.0%), WT1 (38.7%), and RARB (38.7%) were the most frequently methylated genes in bladder tumors, with WT1 methylation being significantly associated with tumor stage (P = 0.011). WT1 and PAX5A were identified as methylated tumor suppressors. In addition, BRCA1, WT1, and RARB were the most frequently methylated genes in urinary specimens. Receiver operating characteristic curve analyses revealed significant diagnostic accuracies in both urinary sets for BRCA1, RARB, and WT1. The novelty of this report relates to applying MS-MLPA, a multiplexed methylation technique, for tumor suppressors in bladder cancer and body fluids. Methylation profiles of tumor suppressor genes were clinically relevant for histopathological stratification of bladder tumors and offered a noninvasive diagnostic strategy for the clinical management of patients affected with uroepithelial neoplasias. PMID:21227392

  12. Chilling tolerant U.S. processing cucumber (Cucumis sativus L.): three advanced backcross and ten inbred backcross lines

    Science.gov (United States)

    Environmental stresses such as chilling temperatures can reduce seed germination rate, seeding emergence rate, flower and fruit development, marketable yield, and postharvest fruit storage longevity in cucumber (Cucumis sativus L.). Chilling temperatures occur in unpredictable patterns, making it d...

  13. [Effects of chlorophyllin-iron on osmotic adjustment and activities of antioxidantive enzymes in cucumber seedlings under suboptimal temperature].

    Science.gov (United States)

    Zhang, Meng; Wang, Xiu-feng; Zhang, Fan-yang; Wei, Min; Shi, Qing-hua; Yang, Feng-juan; Li, Yan

    2014-12-01

    Cucumber cultivar 'Jinyan 4' was subjected to suboptimal temperature treatment of 18/12 degrees C (day/night) in the growth chambers. A solution culture experiment was conducted to study the effect of exogenously spraying 5 mg x L(-1) chlorophyllin-iron solution on plant growth, the content of proline, soluble sugar, MDA and activity of peroxidase in the leaves of cucumber seedling under suboptimal temperature. Application of chlorophyllin-iron showed prominent effects on mitigating the stress of suboptimal temperature on growth of the cucumber seedlings, significantly increasing the plant height, leaf area, shoot dry mass, the contents of soluble sugar and proline and the activities of SOD, POD, CAT and APX. Exogenously spraying chlorophyllin-iron could promote the accumulation of proline and soluble sugar, raise the activities of antioxidant enzymes, decrease the membrane lipid peroxidation and improve the adaptability of cucumber seedlings under suboptimal temperature.

  14. Effects of washing, peeling, storage, and fermentation on residue contents of carbaryl and mancozeb in cucumbers grown in greenhouses.

    Science.gov (United States)

    Saeedi Saravi, S S; Shokrzadeh, M

    2016-06-01

    Cucumbers grown in two different greenhouses were exposed to mancozeb and carbaryl at different times. The effects of 10-day preharvest period, water and detergent washing, peeling, predetermined storage period at 4°C (refrigeration), and fermentation on the reduction of residue levels in the plant tissues were investigated. Mancozeb and carbaryl residues in cucumbers were determined by gas chromatography-electron capture detection. Results showed that residue levels in samples, which were collected after 10 days following the pesticide application, were significantly lower than the samples collected after 2 h subsequent to the pesticide application. The culinary applications were effective in reducing the residue levels of the pesticides in cucumbers. As a result, non-fermentative pickling in sodium chloride and acetic acid was the most effective way to reduce the mancozeb and carbaryl residues of the cucumbers.

  15. 暗期补光对黄瓜幼苗形态调节效果及综合评价%Effect of dark period lighting regulation on cucumber seedling morphology and comprehensive evaluation analysis and comprehensive evaluation

    Institute of Scientific and Technical Information of China (English)

    申宝营; 李毅念; 赵三琴; 丁为民; 惠娜; 李洁

    2014-01-01

    stem diameter at 0.01 levels and significantly interaction effects on seedling index at 0.05 levels. Hypocotyls length of seedlings under L2 for 4h in all treatments was shortest and was 25.14% less than CK, chlorophyll content, dry weight and seedling index of seedlings under L2 for 4 h were largest in all treatments and was 17.34%, 58.33%and 175.28%more than CK respectively. Seedling height under L3 for 2 h was shortest in all treatments and was 22.97%less than CK. Leaf area of cucumber seedlings under L4 for 4 h was largest in all treatments and was 19.10%more than CK, cucumber seedlings stem diameter under L1 for 6h was thickest in all treatments and was 44.52%more than CK, and root shoot ratio of seedlings under L3 for 4h was largest in all treatments and was 41.18%more than CK. According to comprehensive evaluation analysis, comprehensive evaluation value of cucumber seedlings under L2 light quality for 4 h was largest and quality of cucumber seedling was best. In addition, L4 light quality promoted seedling leaf area and stem diameter of cucumber seedlings to increase at early stage (one-leaf stage and two-leaf stage) of seedling, and L2 light quality promoted leaf area and stem diameter to increase at later stage (adult stage) of cucumber seedlings. In conclusion, the most suitable supplemental lighting time during dark period for cucumber seedlings was four hours. The most suitable light quality for cucumber seedling at early stage (one-leaf stage and two-leaf stage) was L4, and the most suitable light quality for cucumber seedling at later stage (adult stage) was L2. This provides the basis for the regulation of cucumber seedling morphology and the designing of supplemental lighting devices.%为确定暗期延时补光调节黄瓜幼苗形态的最优光质和补光时长,采用L1(70%R,30%B)、L2(80%R,20%B)、L3(90%R,10%B)L4(100%R)4种发光二极管(light emitting diodes,LED)光源对“津春四号”黄瓜幼苗进行2 h(19

  16. Wirus mozaiki ogórka na zawilcu (Anemone coronaria L. [Cucumber mosaic virus on Anemone coronaria L.

    Directory of Open Access Journals (Sweden)

    J. Kochman

    2015-06-01

    Full Text Available From Anemone coronaria cucumber mosaic virus (Cucumis virus 1 Smith was isolated. It caused a general chlorosis, reduction of leaves blades and of the whole plants. 66 species of test plants were inoculated with the sap from infected cucumber plants. 33 of these were infected systemically and 11 only locally. Among 22 noninfected plants was Anemone coronaria which indicated as it was experimentally proved, that this species is infected only by the aphids – Myzus persicae Sulz.

  17. Ecological effects of co-culturing sea cucumber Apostichopus japonicus (Selenka) with scallop Chlamys farreri in earthen ponds

    Science.gov (United States)

    Ren, Yichao; Dong, Shuanglin; Qin, Chuanxin; Wang, Fang; Tian, Xiangli; Gao, Qinfeng

    2012-01-01

    Monthly changes in sedimentation and sediment properties were studied for three different culture treatments: sea cucumber monoculture (Mc), sea cucumber and scallop polyculture (Ps-c) and scallop monoculture (Ms). Results indicated that the survival rate of sea cucumber was significantly higher in Ps-c cultures than in Mc cultures. Sea cucumber yield was 69.6% higher in Ps-c culture than in Mc culture. No significant differences in body weight and scallop shell length were found between Ps-c and Ms cultures. The mean sedimentation rate of total particulate matter (TPM) was 72.2 g/(m2·d) in Ps-c cultures, with a maximum of 119.7 g/(m2·d), which was markedly higher than that of Mc (mean value). Sedimentation rates of organic matter (OM), total organic carbon (TOC), total nitrogen (TN) and total phosphorus (TP) in Ps-c cultures were also significantly higher than those in Mc cultures. TOC and TN contents of sediment increased rapidly in the first 5 months in Ms cultures and remained at a high level. TOC and TN contents in Mc and Ps-c cultures decreased during sea cucumber feeding seasons and increased during sea cucumber dormancy periods (summer and winter). The study demonstrates that co-culture of sea cucumber and scallop in earthen ponds is an alternative way to alleviate nutrient loads and improve water quality in coastal aquaculture systems. Moreover, it provides the additional benefit of an increased sea cucumber yield.

  18. Sea Cucumber Fishery and Trade in Sta. Cruz, Davao Del Sur, Philippines: Supply Chains and Cost-Benefit Analyses

    OpenAIRE

    Shuck, Vlademir A.; Rod Norbert D. Mondoyo; Acuňa, Thaddeus R.; Ruth U. Gamboa

    2013-01-01

    In the country, sea cucumbers are exploited almost exclusively for export. It is harvested in three ways; commercial fishing, artisanal fishing and gleaning. These methods provide disproportionate economic benefits to these players in the supply chain. In this study, sea ranching, a new culture system for sea cucumber was analyzed in terms of its economic and commercial viability. Under the sea ranching system Holothuriascabra(sandfish) is the species being raised mainly due to its high econo...

  19. Ecological effects of co-culturing sea cucumber Apostichopus japonicus (Selenka) with scallop Chlamys farreri in earthen ponds

    Institute of Scientific and Technical Information of China (English)

    REN Yichao; DONG Shuanglin; QIN Chuanxin; WANG Fang; TIAN Xiangli; GAO Qinfeng

    2012-01-01

    Monthly changes in sedimentation and sediment properties were studied for three different culture treatments:sea cucumber monoculture (Mc),sea cucumber and scallop polyculture (Ps-c) and scallop monoculture (Ms).Results indicated that the survival rate of sea cucumber was significantly higher in Ps-c cultures than in Mc cultures.Sea cucumber yield was 69.6% higher in Ps-c culture than in Mc culture.No significant differences in body weight and scallop shell length were found between Ps-c and Ms cultures.The mean sedimentation rate of total particulate matter (TPM) was 72.2 g/(m2.d) in Ps-c cultures,with a maximum of 119.7 g/(m2.d),which was markedly higher than that of Mc (mean value).Sedimentation rates of organic matter (OM),total organic carbon (TOC),total nitrogen (TN) and total phosphorus (TP) in Ps-c cultures were also significantly higher than those in Mc cultures.TOC and TN contents of sediment increased rapidly in the first 5 months in Ms cultures and remained at a high level.TOC and TN contents in Mc and Ps-c cultures decreased during sea cucumber feeding seasons and increased during sea cucumber dormancy periods (summer and winter).The study demonstrates that co-culture of sea cucumber and scallop in earthen ponds is an alternative way to alleviate nutrient loads and improve water quality in coastal aquaculture systems.Moreover,it provides the additional benefit of an increased sea cucumber yield.

  20. Functional characterization of gibberellin oxidases from cucumber, Cucumis sativus L.

    Science.gov (United States)

    Pimenta Lange, Maria João; Liebrandt, Anja; Arnold, Linda; Chmielewska, Sara-Miriam; Felsberger, André; Freier, Eduard; Heuer, Monika; Zur, Doreen; Lange, Theo

    2013-06-01

    Cucurbits have been used widely to elucidate gibberellin (GA) biosynthesis. With the recent availability of the genome sequence for the economically important cucurbit Cucumis sativus, sequence data became available for all genes potentially involved in GA biosynthesis for this species. Sixteen cDNAs were cloned from root and shoot of 3-d to 7-d old seedlings and from mature seeds of C. sativus. Two cDNAs code for GA 7-oxidases (CsGA7ox1, and -2), five for GA 20-oxidases (CsGA20ox1, -2, -3, -4, and -5), four for GA 3-oxidases (CsGA3ox1, -2, -3, and -4), and another five for GA 2-oxidases (CsGA2ox1, -2, -3, -4, and -5). Their enzymatic activities were investigated by heterologous expression of the cDNAs in Escherichia coli and incubation of the cell lysates with (14)C-labelled, D2-labelled, or unlabelled GA-substrates. The two GA 7-oxidases converted GA12-aldehyde to GA12 efficiently. CsGA7ox1 converted GA12 to GA14, to 15α-hydroxyGA12, and further to 15α-hydroxyGA14. CsGA7ox2 converted GA12 to its 12α-hydroxylated analogue GA111. All five GA 20-oxidases converted GA12 to GA9 as a major product, and to GA25 as a minor product. The four GA 3-oxidases oxidized the C19-GA GA9 to GA4 as the only product. In addition, three of them (CsGA3ox2, -3, and -4) converted the C20-GA GA12 to GA14. The GA 2-oxidases CsGA2ox1, -2, -3, and -4 oxidized the C19-GAs GA9 and GA4 to GA34 and GA51, respectively. CsGA2ox2, -3, and -4 converted GA51 and GA34 further to respective GA-catabolites. In addition to C19-GAs, CsGA2ox4 also converted the C20-GA GA12 to GA110. In contrast, CsGA2ox5 oxidized only the C20 GA12 to GA110 as the sole product. As shown for CsGA20ox1 and CsGA3ox1, similar reactions were catalysed with 13-hydroxlyated GAs as substrates. It is likely that these enzymes are also responsible for the biosynthesis of 13-hydroxylated GAs in vivo that occur at low levels in cucumber.

  1. Characterization of Cucumber Mosaic Virus Originating from Cucurbits in Serbia

    Directory of Open Access Journals (Sweden)

    Ana Vučurović

    2011-01-01

    Full Text Available Cucumber mosaic virus (CMV is considered one of the most economically importantplant viruses and has a worldwide distribution and a very wide host range including plantsfrom family Cucurbitaceae. In Serbia, on cucurbits CMV was detected in single and mixedinfections with Zucchini yellow mosaic virus (ZYMV and Watermelon mosaic virus (WMV. Viruses,including CMV, are constantly present in cucurbit crops, but their frequency changesby year and locality. Surveys and sample collections were conducted in cucurbit crops inthe period from 2008 to 2009 at 15 localities in Vojvodina province, and sample testing wascarried out using the DAS-ELISA method and commercially available antisera for six economicallymost important cucurbit viruses. In 2008, a total of 51 samples were collected from13 cucurbit crops of oilseed pumpkin Olinka variety, squash, and bottle gourd and CMV wasdetected in a total of 55% of tested samples with symptoms of viral infection. The most commoninfectious type was mixed infection with ZYMV and WMV (35.3%, and then mixedinfection with ZYMV (17.7% and WMV (2%. A total of 599 symptomatic samples of oilseedpumpkin Olinka variety, zucchini squash varieties Beogradska and Tosca, squash, and wintersquash were collected in 15 cucurbits crops in 2009. CMV was present in 4.4% of totalcollected samples, in single infections in 1.3%, and in mixed with WMV or ZYMV in 1.3%, and1.8%. Five CMV isolates were obtained by mechanical inoculations of N. glutinosa and oneof them was selected for further biological characterization. Test plants which were describedto be hosts of CMV expressed symptoms characteristic for those caused by CMV afterinoculations by isolate 115-08. CMV specific primers Au1u/Au2d were used to amplify an850 bp fragment using RT-PCR method. Amplified fragment encodes the entire viral coatprotein (CP gene and partial 5’ and 3’ UTRs of two selected CMV isolates. Amplified fragmentswere sequenced and deposited in the NCBI, where

  2. Effects of FBT on Induction of Systemic Resistance in Cucumber Against Cucumber Fusarium Wilt Caused byFusarium oxysporum f. sp.cucumerinum Owen%氟唑活化酯对黄瓜抗枯萎病的诱导作用

    Institute of Scientific and Technical Information of China (English)

    石延霞; 徐玉芳; 谢学文; 柴阿丽; 王微微; 李宝聚

    2015-01-01

    Objective]The systemic long-lasting and broad-spectrum resistance of cucumber seedlings was induced with natural or synthetic compounds. The objective of this study is to shed light on the resistance induced by fluoro-substituted benzothiadiazole derivatives (FBT) to cucumber Fusarium wiltand provide data for elucidating its mechanism.[Method]Before transplanting, 50 mg·L-1 of FBT was used to spray so as to induce the cucumber seedlings at 3-4 true leaf stage. Three days later, the cucumber seedlings were transplanted into the soil withFusarium oxysporum f. sp.cucumerinum Owen, and sprayed with FBT so as to induce resistance for the second time. Sequently, the cucumber seedlings were sprayed every 7 days and for 3 times continuously. Meanwhile, contrast agent BTH also was used with the same induction method and 70% thiophanate-methyl at 1 500 times was applied through root-irrigation. The efficiency on the blight disease resistance was assessed through investigating disease index. For studying the influence of FBT on F. oxysporum f. sp.cucumerinum invasion of cucumber, the cucumber’s radicle length was sprouted to 0.5 cm and then the radicle immersed in 50 mg·L-1 of FBT. The resistance of cucumber seedlings was induced another time at the stage of 2 pieces of leaves. Since then, the cucumber seedlings were sprayed in order to induce the resistance every 7 days and total for 3 times. Twenty-four hours after the last induction, cucumber was inoculated withF. oxysporum f. sp.cucumerinum by the root-drenching method. Treated roots and the controls were harvested at 1, 3, 5, 7, 9, 11, 14, 16, 20, 24 and 29 days after inoculation and then cleaned in ice water. After induction, acid fuchsin dyeing technology was used to evaluate the FBT impacts on fusarium infection. In addition, the Maule reaction and toluidine blue staining technique were used to evaluate the change of lignin and phenolic substances in cucumber root tissue deposition. Moreover, metabolic alterations

  3. Evaluation of cucurbitacin-based gustatory stimulant to facilitate cucumber beetle (Coleoptera: Chrysomelidae) management with foliar insecticides in melons.

    Science.gov (United States)

    Pedersen, Andrew B; Godfrey, Larry D

    2011-08-01

    The bitter plant-derived compounds cucurbitacins are known to stimulate feeding of adult cucumber beetles (Coleoptera: Chrysomelidae). A cucurbitacin-based gustatory stimulant applied as a flowable bait combined with either spinosad or carbaryl was compared with foliar sprays of spinosad and carbaryl for controlling two cucumber beetle species (Diabrotica undecimpunctata undecimpunctata Mannerheim and Acalymma trivittatum Mannerheim) in honeydew melons (Cucumis melo L.). Field studies were conducted on the University of California-Davis plant pathology farm in 2008 and 2009. Beetle densities after applications and fruit damage from beetle feeding were compared among treatments. In addition, beetle survival was compared within field cages placed over the treated foliage infested with beetles. Using all three measures of efficacy, we determined that the addition of cucurbitacin bait had no effect on the level of cucumber beetle control with carbaryl in either 2008 or 2009. In both years, spinosad did not significantly reduce cucumber beetle densities in either field cages or field plots and did not reduce fruit damage relative to the untreated control. The addition of the bait to spinosad did not improve its efficacy. A laboratory bioassay of the spinosad formulation used in the field showed it had significant lethal effects on adults of both cucumber beetle species. Results indicated that the bait formulation used did not improve cucumber beetle control but may benefit from the addition of floral attractants or using a different type of cucurbitacin.

  4. Vibration behavior of fuel-element vibration suppressors for the advanced power reactor

    Science.gov (United States)

    Adams, D. W.; Fiero, I. B.

    1973-01-01

    Preliminary shock and vibration tests were performed on vibration suppressors for the advanced power reactor for space application. These suppressors position the fuel pellets in a pin type fuel element. The test determined the effect of varying axial clearance on the behavior of the suppressors when subjected to shock and vibratory loading. The full-size suppressor was tested in a mockup model of fuel and clad which required scaling of test conditions. The test data were correlated with theoretical predictions for suppressor failure. Good agreement was obtained. The maximum difference with damping neglected was about 30 percent. Neglecting damping would result in a conservative design.

  5. Gravimorphogenesis of Cucurbitaceae plants: development of peg cells and graviperception mechanism in cucumber seedlings.

    Science.gov (United States)

    Takahashi, H; Fujii, N; Kamada, M; Higashitani, A; Yamazaki, Y; Kobayashi, A; Takano, M; Yamasaki, S; Sakata, T; Mizuno, H; Kaneko, Y; Murata, T; Kamigaichi, S; Aizawa, S; Yoshizaki, I; Shimazu, T; Fukui, K

    2000-06-01

    We examined the effect of microgravity on the peg formation of cucumber seedlings for clarifying the mechanism of gravimorphogenesis in cucurbitaceous plants. The spaceflight experiments verified that gravity controls the formation of peg, hypocotyl hook and growth orientation of cucumber seedlings. Space-grown cucumber developed a peg on each side of the transition zone of the hypocotyl and root, indicating that on the ground peg formation is regulated negatively by gravity (Takahashi et al. 2000). It was found that the auxin-regulated gene, CS-IAA1, was strongly expressed in the transition zone where peg develops (Fujii et al. 2000). In the seedlings grown horizontally on the ground, CS-IAA1 transcripts were much abundant on the lower side of the transition zone, but no such differential expression of CS-IAA1 was observed in the space-grown cucumber (Kamada et al. 2000). These results imply that gravity plays a role in peg formation through auxin redistribution. By the negative control, peg formation on the upper side of the transition zone in the horizontally growing seedlings might be suppressed due to a reduction in auxin concentration. The threshold theory of auxin concentration accounted for the new concept, negative control of morphogenesis by gravity (Kamada et al. 2000). Anatomical studies have shown that there exists the target cells destined to be a peg and distinguishable at the early stage of the growth. Ultra-structural analysis suggested that endoplasmic reticulum develops well in the cells of the future peg. Furthermore, it was found that reorganization of cortical microtubules is required for the change in cell growth polarity in the process of peg formation. The spaceflight experiment with cucumber seedlings also suggested that in microgravity positive hydrotropic response of roots occurred without interference by gravitropic response (Takahashi et al. 1999b). Thus, this spaceflight experiment together with the ground-based studies has shown that

  6. Inactivation of X-linked tumor suppressor genes in human cancer.

    Science.gov (United States)

    Liu, Runhua; Kain, Mandy; Wang, Lizhong

    2012-04-01

    Cancer cells silence autosomal tumor suppressor genes by Knudson's two-hit mechanism in which loss-of-function mutations and then loss of heterozygosity occur at the tumor suppressor gene loci. However, the identification of X-linked tumor suppressor genes has challenged the traditional theory of 'two-hit inactivation' in tumor suppressor genes, introducing the novel concept that a single genetic hit can cause loss of tumor suppressor function. The mechanism through which these genes are silenced in human cancer is unclear, but elucidating the details will greatly enhance our understanding of the pathogenesis of human cancer. Here, we review the identification of X-linked tumor suppressor genes and discuss the potential mechanisms of their inactivation. In addition, we also discuss how the identification of X-linked tumor suppressor genes can potentially lead to new approaches in cancer therapy.

  7. Two amino acids near the N-terminus of Cucumber mosaic virus 2b play critical roles in the suppression of RNA silencing and viral infectivity.

    Science.gov (United States)

    Dong, Kai; Wang, Ying; Zhang, Zhen; Chai, Long-Xiang; Tong, Xin; Xu, Jin; Li, Dawei; Wang, Xian-Bing

    2016-02-01

    Cucumber mosaic virus (CMV) 2b suppresses RNA silencing primarily through the binding of double-stranded RNA (dsRNA) of varying sizes. However, the biologically active form of 2b remains elusive. Here, we demonstrate that the single and double alanine substitution mutants in the N-terminal 15th leucine and 18th methionine of CMV 2b exhibit drastically attenuated virulence in wild-type plants, but are efficiently rescued in mutant plants defective in RNA-dependent RNA polymerase 6 (RDR6) and Dicer-like 4 (DCL4). Moreover, the transgenic plants of 2b, but not 2blm (L15A/M18A), rescue the high infectivity of CMV-Δ2b through the suppression of antiviral silencing. L15A, M18A or both weaken 2b suppressor activity on local and systemic transgene silencing. In contrast with the high affinity of 2b to short and long dsRNAs, 2blm is significantly compromised in 21-bp duplex small interfering RNA (siRNA) binding ability, but maintains a strong affinity for long dsRNAs. In cross-linking assays, 2b can form dimers, tetramers and oligomers after treatment with glutaraldehyde, whereas 2blm only forms dimers, rather than tetramers and oligomers, in vitro. Together, these findings suggest that L15 and M18 of CMV 2b are required for high affinity to ds-siRNAs and oligomerization activity, which are essential for the suppression activity of 2b on antiviral silencing.

  8. Loss of suppressor-of-fused function promotes tumorigenesis.

    Science.gov (United States)

    Lee, Y; Kawagoe, R; Sasai, K; Li, Y; Russell, H R; Curran, T; McKinnon, P J

    2007-09-27

    The Sonic Hedgehog (SHH) signaling pathway is indispensable for development, and functions to activate a transcriptional program modulated by the GLI transcription factors. Here, we report that loss of a regulator of the SHH pathway, Suppressor of Fused (Sufu), resulted in early embryonic lethality in the mouse similar to inactivation of another SHH regulator, Patched1 (Ptch1). In contrast to Ptch1+/- mice, Sufu+/- mice were not tumor prone. However, in conjunction with p53 loss, Sufu+/- animals developed tumors including medulloblastoma and rhabdomyosarcoma. Tumors present in Sufu+/-p53-/- animals resulted from Sufu loss of heterozygosity. Sufu+/-p53-/- medulloblastomas also expressed a signature gene expression profile typical of aberrant SHH signaling, including upregulation of N-myc, Sfrp1, Ptch2 and cyclin D1. Finally, the Smoothened inhibitor, hedgehog antagonist, did not block growth of tumors arising from Sufu inactivation. These data demonstrate that Sufu is essential for development and functions as a tumor suppressor.

  9. Lysine methylation regulates the pRb tumour suppressor protein.

    Science.gov (United States)

    Munro, S; Khaire, N; Inche, A; Carr, S; La Thangue, N B

    2010-04-22

    The pRb tumour suppressor protein has a central role in coordinating early cell cycle progression. An important level of control imposed on pRb occurs through post-translational modification, for example, phosphorylation. We describe here a new level of regulation on pRb, mediated through the targeted methylation of lysine residues, by the methyltransferase Set7/9. Set7/9 methylates the C-terminal region of pRb, both in vitro and in cells, and methylated pRb interacts with heterochromatin protein HP1. pRb methylation is required for pRb-dependent cell cycle arrest and transcriptional repression, as well as pRb-dependent differentiation. Our results indicate that methylation can influence the properties of pRb, and raise the interesting possibility that methylation modulates pRb tumour suppressor activity.

  10. Amyotrophic Lateral Sclerosis (ALS)

    Science.gov (United States)

    ... ALS Neurons' broken machinery piles up in ALS Esclerosis Lateral Amiotrófica Dormant viral genes may awaken to ... Dementia Information Page Multifocal Motor Neuropathy Information Page Multiple Sclerosis Information Page Muscular Dystrophy Information Page Myasthenia ...

  11. Amyotrophic lateral sclerosis (ALS)

    Science.gov (United States)

    Lou Gehrig disease; ALS; Upper and lower motor neuron disease; Motor neuron disease ... 98. Shaw PJ. Amyotrophic lateral sclerosis and other motor neuron diseases. In: Goldman L, Schafer AI, eds. Goldman's Cecil ...

  12. Caffeine activates tumor suppressor PTEN in sarcoma cells

    OpenAIRE

    Miwa, Shinji; Sugimoto, Naotoshi; Shirai, Toshiharu; Hayashi, Katsuhiro; Nishida, Hideji; Ohnari, Issei; Takeuchi, Akihiko; Yachie, Akihiro; Tsuchiya, Hiroyuki

    2011-01-01

    The tumor suppressor phosphatase and tensin homolog deleted on chromosome 10 (PTEN) is a negative regulator of the phosphatidylinositol 3-kinase (PI3K)/Akt signaling pathway. Akt activation exerts a strong anti-apoptotic effect and inhibits key pro-apoptotic proteins. We investigated the effect of caffeine in the prevention of tumor cell proliferation and induction of cell death. We found that caffeine induced increased intracellular cAMP levels, PTEN activation and Akt inactivation, which to...

  13. Enhanced transfection of brain tumor suppressor genes by photochemical internalization

    Science.gov (United States)

    Chou, Chih H.; Sun, Chung-Ho; Zhou, Yi-Hong; Madsen, Steen J.; Hirschberg, Henry

    2011-03-01

    One of many limitations for cancer gene therapy is the inability of the therapeutic gene to transfect a sufficient number of tumor cells. Photochemical internalization (PCI) is a photodynamic therapy-based approach for improving the delivery of macromolecules and genes into the cell cytosol. The utility of PCI for the delivery of a tumor suppressor gene (PAX-6) was investigated in monolayers and spheroids consisting of F98 rat glioma cells.

  14. Functional Study of the Human BRCA2 Tumor Suppressor

    Science.gov (United States)

    2005-08-01

    Wang, Y., Lee, M. & Venkitaraman, A. R. Abnormal cytokinesis in cells deficient in the breast cancer susceptibility protein BRCA2. Science 306, 876...tumor suppressor genes in mitotic and meiotic cells. Mol Cell 2, 317-28 (1998). 28. Fuks, F., Milner, J. & Kouzarides, T. BRCA2 associates with...Scully, R. et al. Association of BRCA1 with Rad5l in mitotic and meiotic cells. Cell 88, 265-75 (1997). 49. Nakanishi, K. et al. Human Fanconi anemia

  15. Suppressors of RNA silencing encoded by tomato leaf curl betasatellites

    Indian Academy of Sciences (India)

    Richa Shukla; Sunita Dalal; V G Malathi

    2013-03-01

    Virus encoded RNA-silencing suppressors (RSSs) are the key components evolved by the viruses to counter RNA-silencing defense of plants. Whitefly-transmitted begomoviruses infecting tomato crop code for five different proteins, ORF AC4, ORF AC2 and ORF AV2 in DNA-A component, ORF BV1 in DNA-B and ORF C1 in satellite DNA which are predicted to function as silencing suppressors. In the present study suppressor function of ORF C1 of three betasatellites Tomato leaf curl Bangalore betasatellite ToLCBB-[IN:Hess:08], Cotton leaf curl Multan betasatellite CLCuMB–[IN:Sri:02] and Luffa leaf distortion betasatellite LuLDB-[IN:Lu:04] were examined. Agroinfiltration of GFP-silenced Nicotiana tabaccum cv. Xanthi with the cells expressing C1 protein resulted in reversal of silenced GFP expression. GFP-siRNA level was more than 50-fold lower compared to silenced plants in plants infiltrated with C1 gene from ToLCBB. However, in the case of 35S-C1 CLCuMB and 35S-C1 LuLDB construct, although GFP was expressed, siRNA level was not reduced, indicating that the step at which C1 interfere in RNA-silencing pathway is different.

  16. Disrupting Ovarian Cancer Metastatic Colonization: Insights from Metastasis Suppressor Studies

    Directory of Open Access Journals (Sweden)

    Shaheena Khan

    2010-01-01

    Full Text Available Ovarian cancer affects approximately 25,000 women in the United States each year and remains one of the most lethal female malignancies. A standard approach to therapy is surgical cytoreduction, after which the remaining microscopic residual disease is treated with chemotherapy. The vast majority of patients have disease recurrence, underscoring the crucial need for approaches to control the regrowth, or colonization, of tissues after local treatment. Improved therapies require mechanistic information about the process of metastatic colonization, the final step in metastasis, in which cancer cells undergo progressive growth at secondary sites. Studies of metastasis suppressors are providing insights into events controlling metastatic colonization. This paper reviews our laboratory's approach to the identification, characterization, and functional testing of the JNKK1/MKK4 metastasis suppressor in ovarian cancer metastatic colonization. Specifically, we demonstrate that interaction of ovarian caner cells with the omental microenvironment activates JNKK1/MKK4 resulting in decreased proliferation without affecting apoptosis. The potential role of the omental microenvironment, specifically milky spot structures, is also described. It is our goal to provide this work as a usable paradigm that will enable others to study metastasis suppressors in clinical and experimental ovarian cancer metastases.

  17. Control of autophagy by oncogenes and tumor suppressor genes.

    Science.gov (United States)

    Maiuri, M C; Tasdemir, E; Criollo, A; Morselli, E; Vicencio, J M; Carnuccio, R; Kroemer, G

    2009-01-01

    Multiple oncogenes (in particular phosphatidylinositol 3-kinase, PI3K; activated Akt1; antiapoptotic proteins from the Bcl-2 family) inhibit autophagy. Similarly, several tumor suppressor proteins (such as BH3-only proteins; death-associated protein kinase-1, DAPK1; the phosphatase that antagonizes PI3K, PTEN; tuberous sclerosic complex 1 and 2, TSC1 and TSC2; as well as LKB1/STK11) induce autophagy, meaning that their loss reduces autophagy. Beclin-1, which is required for autophagy induction acts as a haploinsufficient tumor suppressor protein, and other essential autophagy mediators (such as Atg4c, UVRAG and Bif-1) are bona fide oncosuppressors. One of the central tumor suppressor proteins, p53 exerts an ambiguous function in the regulation of autophagy. Within the nucleus, p53 can act as an autophagy-inducing transcription factor. Within the cytoplasm, p53 exerts a tonic autophagy-inhibitory function, and its degradation is actually required for the induction of autophagy. The role of autophagy in oncogenesis and anticancer therapy is contradictory. Chronic suppression of autophagy may stimulate oncogenesis. However, once a tumor is formed, autophagy inhibition may be a therapeutic goal for radiosensitization and chemosensitization. Altogether, the current state-of-the art suggests a complex relationship between cancer and deregulated autophagy that must be disentangled by further in-depth investigation.

  18. Thinking outside the box: using metastasis suppressors as molecular tools.

    Science.gov (United States)

    Thiolloy, Sophie; Rinker-Schaeffer, Carrie W

    2011-04-01

    Metastasis, the process in which tumor cells move from a primary tumor through the circulation, lodge, and grow in distant locations, is a significant contributor to cancer patient morbidity and mortality, yet remains poorly understood. The molecular processes regulating tumorigenicity and metastasis are distinguishable, suggesting that it is possible to design therapeutic interventions to specifically control metastasis formation. Metastasis suppressors, which specifically regulate metastasis, are being used in "reverse genetics" approaches to discover the phenotypic alterations caused by modulating their levels and/or activity. This strategy is allowing the identification of tumor-host interactions that are crucial for efficient colonization and their disruption can be targeted to suppress metastases formation. In this review we discuss studies addressing invasion and migration, key functions for both early and late in the metastatic process. Metastasis suppressor functions, which modulate lodging and subsequent colonization of the secondary site, are also described. In sum this review focuses on metastasis suppressors that have yielded insight into mechanisms controlling metastasis formation. These serve as platform for out of the box thinking which will enable the discovery of new paradigms in metastasis research. Copyright © 2011. Published by Elsevier Ltd.

  19. BRCA1 tumor suppressor network: focusing on its tail

    Directory of Open Access Journals (Sweden)

    Wang Bin

    2012-02-01

    Full Text Available Abstract Germline mutations of the BRCA1 tumor suppressor gene are a major cause of familial breast and ovarian cancer. BRCA1 plays critical roles in the DNA damage response that regulates activities of multiple repair and checkpoint pathways for maintaining genome stability. The BRCT domains of BRCA1 constitute a phospho-peptide binding domain recognizing a phospho-SPxF motif (S, serine; P, proline; × varies; F, phenylalanine. The BRCT domains are frequently targeted by clinically important mutations and most of these mutations disrupt the binding surface of the BRCT domains to phosphorylated peptides. The BRCT domain and its capability to bind phosphorylated protein is required for the tumor suppressor function of BRCA1. Through its BRCT phospho-binding ability BRCA1 forms at least three mutually exclusive complexes by binding to phosphorylated proteins Abraxas, Bach1 and CTIP. The A, B and C complexes, at lease partially undertake BRCA1's role in mechanisms of cell cycle checkpoint and DNA repair that maintain genome stability, thus may play important roles in BRCA1's tumor suppressor function.

  20. Suppressors of RNA silencing encoded by tomato leaf curl betasatellites.

    Science.gov (United States)

    Shukla, Richa; Dalal, Sunita; Malathi, V G

    2013-03-01

    Virus encoded RNA-silencing suppressors (RSSs) are the key components evolved by the viruses to counter RNA-silencing defense of plants. Whitefly-transmitted begomoviruses infecting tomato crop code for five different proteins, ORF AC4, ORF AC2 and ORF AV2 in DNA-A component, ORF BV1 in DNA-B and ORF beta C1 in satellite DNA beta which are predicted to function as silencing suppressors. In the present study suppressor function of ORF beta C1 of three betasatellites Tomato leaf curl Bangalore betasatellite ToLCBB-[IN:Hess:08], Cotton leaf curl Multan betasatellite CLCuMB-[IN:Sri:02] and Luffa leaf distortion betasatellite LuLDB-[IN:Lu:04] were examined. Agroinfiltration of GFP-silenced Nicotiana tabaccum cv. Xanthi with the cells expressing betaC1 protein resulted in reversal of silenced GFP expression. GFP-siRNA level was more than 50-fold lower compared to silenced plants in plants infiltrated with betaC1 gene from ToLCBB. However, in the case of 35S-beta C1 CLCuMB and 35S- beta C1 LuLDB construct, although GFP was expressed, siRNA level was not reduced, indicating that the step at which beta C1 interfere in RNA-silencing pathway is different.

  1. Bioinformatic investigation of the role of ubiquitins in cucumber flower morphogenesis

    Science.gov (United States)

    Pawełkowicz, Magdalena; Osipowski, Paweł; Wojcieszek, Michał; Kowalczuk, Cezary; PlÄ der, Wojciech; Przybecki, Zbigniew

    2016-09-01

    Three cDNA clones were used to screen cucumber genome in order to find genes and proteins. Functional annotation reveals that they are correlated with ubiquitination pathways. Various bioinformatics tools were used to screen and check protein sequences features such as: the presence of specific domains, transmembrane regions, cleavage site and cellular placement. The computational analysis for promotor region shows many binding sites for transcription factors, which could regulate the expression of genes. In order to check gene expression levels in developing flower buds of monoecious (B10) and gynoecious (2gg) cucumber lines, the real - time PCR technique was applied. The expression was checked for the whole buds and only for the 3rd and 4th whorls of bud when generative organ are form which were obtained by Laser Capture Microdissection (LCM) technique.

  2. The Effect of Salt Priming on the Performance of Differentially Matured Cucumber (Cucumis sativus Seeds

    Directory of Open Access Journals (Sweden)

    Kazem GHASSEMI-GOLEZANI

    2008-08-01

    Full Text Available The influence of salt priming (3% KNO3 for 3 days and 1% NaCl for 2 days at 20 degree on germination, seedling emergence and seedling dry weight of two Iranian cucumber cultivars of Basmenj and Varamin harvested at 25, 35 and 45 days after anthesis (DAA was investigated in an unheated glasshouse. Seed germination and seedling emergence and growth were significantly affected by seed maturity and priming. Maximum advantage of priming seedling vigour was observed in seeds harvested at 25 DAA. Smaller effects of priming were also seen in the decreased mean germination and emergence times and increased seedling dry weight of seeds harvested at 35 and 45 DAA. Priming reduced percentage of seeds that germinated, but failed to emerge. In all cases, KNO3 priming was more effective than NaCl priming. Therefore, KNO3 priming can be used to improve cucumber seedling emergence and establishment, particularly in early spring sowings at low temperatures.

  3. Determination of set potential voltages for cucumber mosaic virus detection using screen printed carbon electrode

    Science.gov (United States)

    Uda, M. N. A.; Hasfalina, C. M.; Samsuzana, A. A.; Faridah, S.; Rafidah A., R.; Hashim, U.; Ariffin, Shahrul A. B.; Gopinath, Subash C. B.

    2017-03-01

    Cucumber Mosaic Virus (CMV) is a most dangerous pathogen among the cucurbit plant which it striking cucumbers, zucchinis, squashes, watermelons but it also striking to non-cucurbit such as peppers, tobaccos, celeries, beans and tomatoes. Symptoms shown by this virus when they starting to strike are very significant and at the end can kill the hosts they infected. In order to detect these viruses, biosensor such as screen-printed carbon electrode (SPCE) is developed and fixes a set potential voltage is defined using Chronoamperometry (CM) immunosensor technique. For short introduction, CM is a process which is a constant applied potential voltage between the working and reference electrode is maintained in order to create an electrons transfer for the oxidation or reduction species taking place at the surface of working electrode is measured and in this manuscript, complete details about measurement were used to finding the stable set potential voltages will be pointed out.

  4. Synergism of Lumbricus rubellus and Pseudomonas putida Pf-20 in Inducing Resistance to Cucumber Mosaic Virus

    Directory of Open Access Journals (Sweden)

    WIWIEK SRI WAHYUNI

    2006-09-01

    Full Text Available Both Lumbricus rubellus and Pseudomonas putida decompose soil organic matters. The population of P. putida Pf-20 increased if L. rubellus was introduced to the cucumber growth medium. The process of organic decomposition was much better if the medium was introduced with both L. rubellus and P. putida Pf-20, compared to the medium contained only either one of those organisms. The activity of L. rubellus may serve to provide nutrients for both the cucumber and P. putida. The role of P. putida to reduce disease severity was increased if L. rubellus was introduced to the growth medium. The synergism of these two organisms, reduced either the level of disease severity to CMV-48 and C/N ratio of medium, but increased the content of available phosphor and potassium.

  5. Differential effects of organic compounds on cucumber damping-off and biocontrol activity of antagonistic bacteria

    DEFF Research Database (Denmark)

    Li, Bin; Ravnskov, Sabine; Guanlin, X.;

    2011-01-01

    The influence of the organic compounds tryptic soy broth, cellulose, glucose and chitosan on cucumber damping-off caused by Pythium aphanidermatum and biocontrol efficacy of the biocontrol agents (BCAs) Paenibacillus macerans and P. polymyxa were examined in a seedling emergence bioassay. Results...... showed that the organic compounds differentially affected both pathogen and BCAs. Tryptic soy broth, glucose and chitosan increased Pythium damping-off of cucumber, compared to the control treatment without organic compounds, whereas cellulose had no effect. Both Paenibacillus species had biocontrol...... effects against Pythium damping-off compared with the corresponding treatments with P. aphanidermatum alone, but the biocontrol efficacy depended on the type of organic compounds added. Both BCAs counteracted damping-off in treatments with TSB and chitosan. However, P. polymyxa counteracted damping...

  6. Polyploidy induction by hydrostatic pressure shock and embryo development of sea cucumber Apostichopus japonicus

    Institute of Scientific and Technical Information of China (English)

    DING Jun; CHANG Yaqing; WANG Zichen; SONG Jian

    2007-01-01

    The manipulation of the chromosome set for commercially valuable marine animals is important for enhancing aquacultural production. In this study, triploid and tetraploid sea cucumber Apostichopus japonicus were induced by hydrostatic pressure shock, and the conditions of appropriate induction were tested with different starting times, and hydrostatic pressure intensities and durations. The highest rate of triploid induction reached 20% and that of tetraploid was 60%. In consideration of the survival rate and hatch rate, the appropriate treatment for triploid was 55 Mpa of hydrostatic pressure for 5 min at 55 min after fertilization (a.f.), while for tetraploid it was 60 Mpa for 5 min at 61 min a.f. The triploid of the sea cucumber could survive through the pelagic larval stage and attachment stage, and develop like the control group of the experiment. The tetraploid, however, could not survive the attachment stage.

  7. Antimicrobial Activity of Sphingolipids Isolated from the Stems of Cucumber (Cucumis sativus L.

    Directory of Open Access Journals (Sweden)

    Zhu Yu

    2010-12-01

    Full Text Available Three antimicrobial sphingolipids were separated by bioassay-guided isolation from the chloroform fraction of the crude methanol extract of cucumber (Cucumis sativus L. stems and identified as (2S,3S,4R,10E-2-[(2'R-2-hydroxytetra-cosanoylamino]-1,3,4-octadecanetriol-10-ene (1, 1-O-β-D-glucopyranosyl(2S,3S,4R,10E-2-[(2'R-2-hydroxy-tetracosanoylamino]-1,3,4-octadecanetriol-10-ene (2 and soya-cerebroside I (3 by their physicochemical properties and spectroscopic analysis. They were evaluated to show antifungal and antibacterial activity on test microorganisms including four fungal and three bacterial species. Among them, compound 1, a relatively low polarity aglycone,  exhibited stronger antimicrobial activity than its corresponding glycoside 2. The results indicated that sphingolipids could be the main antimicrobial compounds in the crude methanol extract of cucumber stems.

  8. Microsatellite DNA polymorphisms and the relation with body weight in sea cucumber Apostichopus japonicus

    Institute of Scientific and Technical Information of China (English)

    WANG Xiuli; SHAN Xue; QIU Xuemei; MENG Xiangying; CHANG Yaqing

    2009-01-01

    The relationship between microsatellite polymorphism and body weight of captive bred Chinese sea cucumber Apostichopus japonicus was investigated in two local populations in Dalian.Among ten loci discovered, nine show changes except for A J07 loci. Seven loci were found highly polymorphic in both populations. For each locus in two populations, the average number of alleles is 6.428 6 and 6.285 7, the average observed heterozygosity at 0.225 7 and 0.245 9, the expected heterozygosity at 0.776 8 and 0.748 8, the polymorphism information content (PIC) at 0.709 2 and 0.674 6, respectively. Further analysis show significant correlation between A. japonicus body weight and occurrence markers AJ02 and AJ04. The findings of the relation may be helpful for molecular breeding,as well as the marker-assisted selection of sea cucumbers.

  9. Effects of cinnamic acid on the physiological characteristics of cucumber seedlings under salt stress

    Institute of Scientific and Technical Information of China (English)

    WANG Xuezheng; WANG Hua; WU Fengzhi; LIU Bo

    2007-01-01

    Effects of cinnamic acid on the physiological characteristics of cucumber(Shandong Mici)seedlings under salt stress were studied,and the best concentration and treatment time were ascertained.The results showed that cinnamic acid relatively increased the leaf relative water content and the chlorophyll content,decreased plasma membrane permeability,mitigated membrane damage,inhibited the accumulation of malondialdehyde(product of membrane lipid peroxidation),and promoted the activity of membrane protective enzymes such as super oxide dismutase and peroxidase,therefore improving the adaptabilities of cucumber to salt stress.It is concluded that the best treatment time of cinnamic acid is in the two euphylla period,and the best treatment concentration of cinnamic acid is 50 μmol/L.

  10. [Allelopathic effects of Lycoris radiate on radish, cucumber, tomato and rape seedlings].

    Science.gov (United States)

    Jiang, Hongyun; Zhang, Yanning; Feng, Pingzhang; Zhang, Heng

    2006-09-01

    The laboratory test showed that Lycoris radiate water extract had a stronger inhibitory effect on the seed germination and seedling growth of radish, cucumber, tomato and rape. After treated with 0.0125 g x ml(-1) of the extract, tomato seed could not germinate, but the seed germination inhibition rate of rape, radish and cucumber was only 17.73%, 14.97% and 2.65%, respectively. Under the same concentrations of the extract, sprout growth was inhibited more strongly than root growth. L. radiate methanol extract could inhibit the sprout and root growth of endosperm-removed wheat and sorghum, and the effect was stronger for sorghum than for wheat. All of these illustrated that L. radiate extracts mainly inhibited non-photosynthesis activity, but could also inhibit photosynthesis activity to some degree.

  11. Rheological and Structural Properties of Sea Cucumber Stichopus japonicus During Heat Treatment

    Institute of Scientific and Technical Information of China (English)

    GAO Xin; XUE Dongmei; ZHANG Zhaohui; XU Jiachao; XUE Changhu

    2005-01-01

    Changes in tissue structure, rheological properties and water content of raw and heated sea cucumber meat were studied. Sea cucumber Stichopus japonicus was heated at 25 ℃, 70 ℃ and 100 ℃ water for 5 min. The structural changes were observed using a light microscope and the rheological parameters (rupture strength, adhesive strength and deformation)determined using a texture meter. Microscopic photograph revealed that the structural change of heated meat was greater than that of raw meat. The rupture strength, adhesive strength and deformation of raw meat were smaller than those of the heated meat. Meanwhile, rheological parameters showed positive correlation with heating temperature. These changes are mainly caused by thermal denaturation and gelatinization of collagen during heating. These changes were also evidenced in observations using a light microscope and differential scanning calorimetry.

  12. Assessment of Salicylic Acid Impacts on Seedling Characteristic of Cucumber (Cucumis sativus L. under Water Stress

    Directory of Open Access Journals (Sweden)

    Hossein MARDANI

    2012-02-01

    Full Text Available Impacts of various concentrations of salicylic acid (SA on cucumber (Cucumis sativus L. seedling characteristic were evaluated under different water stress levels by using a factorial arrangement based on completely randomized design with three replications at experimental greenhouse of Ferdowsi University of Mashhad, Iran. The studied factors included three water deficit levels (100% FC, 80% FC, and 60% FC considered as first factor and five levels of SA concentrations (0, 0.25, 0.5, 0.75, and 1 mM as second factor. Results showed that foliar application of SA at the highest concentration enhanced leaf area, leaf and dry weight while decreased stomatal conductance under high level of water deficit stress. Though, severe water deficit stress sharply raised the SPAD reading values. In general, exogenous SA application could develop cucumber seedling characteristic and improve water stress tolerance.

  13. Study on the Free Radical Scavenging Activity of Sea Cucumber (Paracaudina chinens var.) Gelatin Hydrolysate

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    Gelatin from the sea cucumber (Paracaudina chinens var.) was hydrolyzed by bromelain and the hydrolysate was found to have a high free radical scavenging activity. The hydrolysate was fractionated through an ultrafiltration membrane with 5 kDa molecular weight cutoff (MWCO). The portion (less than 5 kDa) was further separated by Sephadex G-25. The active peak was collected and assayed for free radical scavenging activity. The scavenging rates for superoxide anion radicals (O2·-) and hydroxyl radicals (·OH) of the fraction with the highest activity were 29.02% and 75.41%, respectively. A rabbit liver mitochondrial free radical damage model was adopted to study the free radical scavenging activity of the fraction. The results showed that the sea cucumber gelatin hydrolysate can prevent the damage of rabbit liver and mitochondria.

  14. The tumor suppressor gene retinoblastoma-1 is required for retinotectal development and visual function in zebrafish.

    Directory of Open Access Journals (Sweden)

    Michael Gyda

    Full Text Available Mutations in the retinoblastoma tumor suppressor gene (rb1 cause both sporadic and familial forms of childhood retinoblastoma. Despite its clinical relevance, the roles of rb1 during normal retinotectal development and function are not well understood. We have identified mutations in the zebrafish space cadet locus that lead to a premature truncation of the rb1 gene, identical to known mutations in sporadic and familial forms of retinoblastoma. In wild-type embryos, axons of early born retinal ganglion cells (RGC pioneer the retinotectal tract to guide later born RGC axons. In rb1 deficient embryos, these early born RGCs show a delay in cell cycle exit, causing a transient deficit of differentiated RGCs. As a result, later born mutant RGC axons initially fail to exit the retina, resulting in optic nerve hypoplasia. A significant fraction of mutant RGC axons eventually exit the retina, but then frequently project to the incorrect optic tectum. Although rb1 mutants eventually establish basic retinotectal connectivity, behavioral analysis reveals that mutants exhibit deficits in distinct, visually guided behaviors. Thus, our analysis of zebrafish rb1 mutants reveals a previously unknown yet critical role for rb1 during retinotectal tract development and visual function.

  15. Risk of field cultivation of pickling cucumber caused by unfavorable sunshine duration conditions

    OpenAIRE

    2011-01-01

    Solar energy, accessible to plants during sunshine from the sunrise to the sunset is of key importance in productivity of agrocenoses. The aim of the work was to determine risk of pickling cucumber cultivation caused by an unfavorable course of sunshine duration in Poland on the basis of a 40-year research period 1966-2005. The research into the subject was undertaken due to frequent occurrence of sunshine deficiency in Poland and its high temporal and spatial variability. Effect of solar con...

  16. CeO₂ and ZnO nanoparticles change the nutritional qualities of cucumber (Cucumis sativus).

    Science.gov (United States)

    Zhao, Lijuan; Peralta-Videa, Jose R; Rico, Cyren M; Hernandez-Viezcas, Jose A; Sun, Youping; Niu, Genhua; Servin, Alia; Nunez, Jose E; Duarte-Gardea, Maria; Gardea-Torresdey, Jorge L

    2014-04-02

    There is lack of information about the effects of nanoparticles (NPs) on cucumber fruit quality. This study aimed to determine possible impacts on carbohydrates, proteins, mineral nutrients, and antioxidants in the fruit of cucumber plants grown in soil treated with CeO2 and ZnO NPs at 400 and 800 mg/kg. Fourier transform infrared spectroscopy (FTIR) was used to detect changes in functional groups, while ICP-OES and μ-XRF were used to quantify and map the distribution of nutrient elements, respectively. Results showed that none of the ZnO NP concentrations affected sugars; however at 400 mg/kg, CeO2 and ZnO NPs increased starch content. Conversely, CeO2 NPs did not affect starch content but impacted nonreducing sugar content (sucrose). FTIR data showed changes in the fingerprint regions of 1106, 1083, 1153, and 1181, indicating that both NPs altered the carbohydrate pattern. ZnO NPs did not impact protein fractionation; however, CeO2 NPs at 400 mg/kg increased globulin and decreased glutelin. Both CeO2 and ZnO NPs had no impact on flavonoid content, although CeO2 NPs at 800 mg/kg significantly reduced phenolic content. ICP-OES results showed that none of the treatments reduced macronutrients in fruit. In case of micronutrients, all treatments reduced Mo concentration, and at 400 mg/kg, ZnO NPs reduced Cu accumulation. μ-XRF revealed that Cu, Mn, and Zn were mainly accumulated in cucumber seeds. To the best of the authors' knowledge this is the first report on the nutritional quality of cucumber fruit attributed to the impact of CeO2 and ZnO NPs.

  17. QTL mapping of powdery mildew resistance in WI 2757 cucumber (Cucumis sativus L.).

    Science.gov (United States)

    He, Xiaoming; Li, Yuhong; Pandey, Sudhakar; Yandell, Brain S; Pathak, Mamta; Weng, Yiqun

    2013-08-01

    Powdery mildew (PM) is a very important disease of cucumber (Cucumis sativus L.). Resistant cultivars have been deployed in production for a long time, but the genetic mechanisms of PM resistance in cucumber are not well understood. A 3-year QTL mapping study of PM resistance was conducted with 132 F2:3 families derived from two cucumber inbred lines WI 2757 (resistant) and True Lemon (susceptible). A genetic map covering 610.4 cM in seven linkage groups was developed with 240 SSR marker loci. Multiple QTL mapping analysis of molecular marker data and disease index of the hypocotyl, cotyledon and true leaf for responses to PM inoculation identified six genomic regions in four chromosomes harboring QTL for PM resistance in WI 2757. Among the six QTL, pm1.1 and pm1.2 in chromosome 1 conferred leaf resistance. Minor QTL pm3.1 (chromosome 3) and pm4.1 (chromosome 4) contributed to disease susceptibility. The two major QTL, pm5.1 and pm5.2 were located in an interval of ~40 cM in chromosome 5 with each explaining 21.0-74.5 % phenotypic variations. Data presented herein support two recessively inherited, linked major QTL in chromosome 5 plus minor QTL in other chromosomes that control the PM resistance in WI 2757. The QTL pm5.2 for hypocotyl resistance plays the most important role in host resistance. Multiple observations in the same year revealed the importance of scoring time in the detection of PM resistance QTL. Results of this study provided new insights into phenotypic and genetic mechanisms of powdery mildew resistance in cucumber.

  18. Endogenous salicylic acid accumulation is required for chilling tolerance in cucumber (Cucumis sativus L.) seedlings.

    Science.gov (United States)

    Dong, Chun-Juan; Li, Liang; Shang, Qing-Mao; Liu, Xin-Yan; Zhang, Zhi-Gang

    2014-10-01

    Salicylic acid (SA) is an important plant hormone, and its exogenous application can induce tolerance to multiple environmental stresses in plants. In this study, we examine the potential involvement of endogenous SA in response to chilling in cucumber (Cucumis sativus L.) seedlings. A low temperature of 8 °C induces a moderate increase in endogenous SA levels. Chilling stimulates the enzymatic activities and the expression of genes for phenylalanine ammonia-lyase (PAL) and benzoic acid-2-hydroxylase rather than isochorismate synthase. This indicates that the PAL enzymatic pathway contributes to chilling-induced SA production. Cucumber seedlings pretreated with SA biosynthesis inhibitors accumulate less endogenous SA and suffer more from chilling damage. The expression of cold-responsive genes is also repressed by SA inhibitors. The reduction in stress tolerance and in gene expression can be restored by the exogenous application of SA, confirming the critical roles of SA in chilling responses in cucumber seedlings. Furthermore, the inhibition of SA biosynthesis under chilling stress results in a prolonged and enhanced hydrogen peroxide (H2O2) accumulation. The application of exogenous SA and the chemical scavenger of H2O2 reduces the excess H2O2 and alleviates chilling injury. In contrast, the protective effects of SA are negated by foliar spraying with high concentrations of H2O2 and an inhibitor of the antioxidant enzyme. These results suggest that endogenous SA is required in response to chilling stress in cucumber seedlings, by modulating the expression of cold-responsive genes and the precise induction of cellular H2O2 levels.

  19. Sulfated polysaccharides with antioxidant and anticoagulant activity from the sea cucumber Holothuria fuscogliva

    Science.gov (United States)

    Li, Rongfeng; Yu, Huahua; Yue, Yang; Liu, Song; Xing, Rong'e.; Chen, Xiaolin; Li, Pengcheng

    2016-08-01

    Sea cucumber is a traditional nutritional food and medicinal resource with many bioactive components in China. Holothuria fuscogliva is a big sea cucumber with a rich of bioactive polysaccharides. To investigate the bioactivities of the polysaccharides from sea cucumber H. fuscogliva, we prepared the sulfated polysaccharides (HfP) from sea cucumber H. fuscogliva using a protease hydrolysis method. Antioxidant activities of HfP were investigated, including hydroxyl radical scavenging activity and superoxide radical scavenging activity. And, the anticoagulant activities of HfP were studied, including the activated partial thromboplastin time (APTT), prothrombin time (PT) and thrombin time (TT). The average molecular weight was 1 867.1 Da, with a sulfate content of 20.7%. In addition, the molar ratio of monosaccharide composition of HfP was Man: Rha: Glc A: Glc: Gal: Xyl: Fuc=0.083 6: 0.437: 0.134: 0: 1.182: 0.748: 1. It had a strong antioxidant activity, the hydroxyl and superoxide radical scavenging activity EC 50 of HfP was 3.74 and 0.037 mg/mL, respectively. It also showed a good anticoagulant activity in our study. The APTT of HfP was much higher than that of heparin sodium, and the PT and TT of HfP was close to that of heparin sodium at a low concentration. Therefore, HfP shows a good antioxidant and anticoagulant activity and it may become a potential candidate of the natural antioxidant and anticoagulant and will have a good application future in health product or medicine industry.

  20. Inducement of Salicylic Acid in Cucumber Cotyledons by Neodymium and Lanthanum

    Institute of Scientific and Technical Information of China (English)

    Zhang Pengying; Chen Kaoshan

    2007-01-01

    The cotyledons of cucumber were used to investigate the effects of Nd3+ and La3+ on physiological characters in respect of plant resistance. The cucumber cotyledons were sprayed with 15 μg·ml-1 Nd3+ and La3+, and the changes on salicylic acid (SA) and SA 2-O-β-glucoside (SAG) contents, the generation of · O-2, and β-1, 3-glucanase and chitinase activities were measured. The results demonstrated that the yields of endogenous SA and SAG in cucumber cotyledons were enhanced significantly in a short time in response to Nd3+ and La3+ treatments. At 3 h after La3+ treatment, the levels of SA and SAG reached the maximum, with 4.3 and 3.3-fold of that in control (CK), respectively. At 12 h after Nd3+ treatment, the contents of SA and SAG reached peak levels, increased by 4.5 and 3.0-fold of that in control (CK), respectively. These two components were kept in a higher level up to 72 h after treatment. The generation rate of · O-2 increased gradually in the treatments of Nd3+ or La3+, and then decreased in cucumber at 12 h. β-1,3-glucanase activity reached peak at 3 h, while chitinase activity reached peak at 12 h, and then both decreased gradually in Nd3+ or La3+ treatments. At 72 h after treatment, activities of β-1, 3-glucanase and chitinase increased by about 30% and 50%, as compared with CK. Therefore, these results suggested that both Nd3+ and La3+ could increase the contents of endogenous SA and its related factors which induce plant resistance through the signal pathway of the salicylic acid.

  1. Development of broad virus resistance in non-transgenic cucumber using CRISPR/Cas9 technology.

    Science.gov (United States)

    Chandrasekaran, Jeyabharathy; Brumin, Marina; Wolf, Dalia; Leibman, Diana; Klap, Chen; Pearlsman, Mali; Sherman, Amir; Arazi, Tzahi; Gal-On, Amit

    2016-09-01

    Genome editing in plants has been boosted tremendously by the development of CRISPR/Cas9 (Clustered Regularly Interspaced Short Palindromic Repeats) technology. This powerful tool allows substantial improvement in plant traits in addition to those provided by classical breeding. Here, we demonstrate the development of virus resistance in cucumber (Cucumis sativus L.) using Cas9/subgenomic RNA (sgRNA) technology to disrupt the function of the recessive eIF4E (eukaryotic translation initiation factor 4E) gene. Cas9/sgRNA constructs were targeted to the N' and C' termini of the eIF4E gene. Small deletions and single nucleotide polymorphisms (SNPs) were observed in the eIF4E gene targeted sites of transformed T1 generation cucumber plants, but not in putative off-target sites. Non-transgenic heterozygous eif4e mutant plants were selected for the production of non-transgenic homozygous T3 generation plants. Homozygous T3 progeny following Cas9/sgRNA that had been targeted to both eif4e sites exhibited immunity to Cucumber vein yellowing virus (Ipomovirus) infection and resistance to the potyviruses Zucchini yellow mosaic virus and Papaya ring spot mosaic virus-W. In contrast, heterozygous mutant and non-mutant plants were highly susceptible to these viruses. For the first time, virus resistance has been developed in cucumber, non-transgenically, not visibly affecting plant development and without long-term backcrossing, via a new technology that can be expected to be applicable to a wide range of crop plants.

  2. Growth and yield of grafted cucumbers in soil infested with root-knot nematodes

    Directory of Open Access Journals (Sweden)

    Smiljana Goreta Ban

    2014-03-01

    Full Text Available The aim of this study was to determine the effect of rootstocks on the growth and yield of cucumber (Cucumis sativus L. plants in soils infested with root-knot nematodes (Meloidogyne spp. Cucumber 'Adrian' was grown with its own roots or was grafted onto three rootstocks of Lagenariasiceraria (Molina Standi. ('Emphasis', 'S-1', and 'Gourd', two interspecific hybrid rootstocks of Cucurbita maxima Duchesne x C. moschata Duchesne ('Strong Tosa' and 'RS 841 Improved' and zucchini Cucurbita pepo L. ('Romanesco Zucchini'. The experiments were conducted in commercial greenhouse, with cucumber grafted onto three rootstocks in the first season and onto six rootstocks in the second spring-summer season. The number of leaves was considerably affected by the rootstock in both seasons, and was the highest for the plants grafted onto interspecific rootstocks (28.0 in the first and 44.9 in the second season. The plants grafted onto 'Strong Tosa' had higher total number of fruits (19.9 and yield (5.38 kg compared to other rootstocks or non-grafted plants in first season, and the same result was found for two interspecific rootstocks in the second season (6.96 kg and more than 28.9 fruits per plant. The total soluble solids, pH and electrical conductivity of the fruit were not affected by rootstock, while titratable acidity changed with the rootstock type. The grafting of cucumber plants onto different rootstocks was confirmed as an acceptable non-chemical method to compete with the limitations of soils infected with root-knot nematodes, but the effect was highly dependent on the choice of the rootstock.

  3. Sulfated polysaccharides with antioxidant and anticoagulant activity from the sea cucumber Holothuria fuscogliva

    Science.gov (United States)

    Li, Rongfeng; Yu, Huahua; Yue, Yang; Liu, Song; Xing, Rong'e.; Chen, Xiaolin; Li, Pengcheng

    2017-07-01

    Sea cucumber is a traditional nutritional food and medicinal resource with many bioactive components in China. Holothuria fuscogliva is a big sea cucumber with a rich of bioactive polysaccharides. To investigate the bioactivities of the polysaccharides from sea cucumber H. fuscogliva, we prepared the sulfated polysaccharides (HfP) from sea cucumber H. fuscogliva using a protease hydrolysis method. Antioxidant activities of HfP were investigated, including hydroxyl radical scavenging activity and superoxide radical scavenging activity. And, the anticoagulant activities of HfP were studied, including the activated partial thromboplastin time (APTT), prothrombin time (PT) and thrombin time (TT). The average molecular weight was 1 867.1 Da, with a sulfate content of 20.7%. In addition, the molar ratio of monosaccharide composition of HfP was Man: Rha: Glc A: Glc: Gal: Xyl: Fuc=0.083 6: 0.437: 0.134: 0:1.182: 0.748: 1. It had a strong antioxidant activity, the hydroxyl and superoxide radical scavenging activity EC50 of HfP was 3.74 and 0.037 mg/mL, respectively. It also showed a good anticoagulant activity in our study. The APTT of HfP was much higher than that of heparin sodium, and the PT and TT of HfP was close to that of heparin sodium at a low concentration. Therefore, HfP shows a good antioxidant and anticoagulant activity and it may become a potential candidate of the natural antioxidant and anticoagulant and will have a good application future in health product or medicine industry.

  4. Dietary Cordyceps militaris protects against Vibrio splendidus infection in sea cucumber Apostichopus japonicus.

    Science.gov (United States)

    Sun, Yongxin; Du, Xingfan; Li, Shuying; Wen, Zhixin; Li, Yajie; Li, Xuejun; Meng, Nan; Mi, Rui; Ma, Shuhui; Sun, Aijie

    2015-08-01

    Vibrio splendidus is the common pathogen that causes infectious diseases widely spread in cultured sea cucumber in China. Therefore, we investigated the ability of Cordyceps militaris to protect against infection caused by V. splendidus. In this study, sea cucumbers were fed with a diet containing 0 (control), 1%, 2% or 3% C. militaris for 28 days, and subsequently challenged with V. splendidus by injection with 1.0 × 10(9) cfu per animal. Parameters of immune response such as phagocytosis (PC), lysozyme (LSZ) activity, superoxide dismutase (SOD) activity, alkaline phosphatase (AKP) activity and acid phosphatase (ACP) activity were determined on days 0, 1, 3, 5 and 7 after injection. The results showed that dietary C. militaris at a dose of 2% or 3% significantly up-regulated (P < 0.05) all the immune parameters on day 0. One day after injection with V. splendidus, all the immune indices except ACP exhibited a tendency to decrease and then increase again, returning to the initial level on days 5 and/or 7 after injection. All the immune parameters of those fed with C. militaris were found significantly higher (P < 0.05) than those of the control group on day 1 after injection. Only LSZ activity of those fed with 1%- or 3%-C. militaris diet on day 5 showed significantly increases (P < 0.05) than the controls. As for ACP activity, the values remained steady with time, but with significant increase (P < 0.05) seen in sea cucumbers fed with 2%-C. militaris diet, and lasted for up to 7 days after V. splendidus injection. The cumulative mortality of sea cucumbers fed with the basal diet followed V. splendidus infection was significantly higher (P < 0.05) than those fed with 2% and 3% C. militaris diet. Under the experimental conditions, dietary C. militaris could enhance the immune responses of Apostichopus japonicus and improve its resistance to infection by V. splendidus.

  5. Plant-microorganism-soil interactions influence the Fe availability in the rhizosphere of cucumber plants.

    Science.gov (United States)

    Pii, Youry; Penn, Alexander; Terzano, Roberto; Crecchio, Carmine; Mimmo, Tanja; Cesco, Stefano

    2015-02-01

    Iron (Fe) is a very important element for plants, since it is involved in many biochemical processes and, often, for the low solubility of the natural Fe sources in soil, plants suffer from Fe - deficiency, especially when grown on calcareous soils. Among the numerous plant growth-promoting rhizobacteria (PGPR) that colonize the rhizosphere of agronomically important crops, Azospirillum brasilense has been shown to exert strong stimulating activities on plants, by inducing alterations of the root architecture and an improvement of mineral nutrition, which could result from an enhancement of ion uptake mechanisms as well as by increased bioavailability of nutrients. Some studies have also established that A. brasilense can act as biocontrol agent, by preventing the growth and/or virulence of phytopathogens, most likely through the production of microbial siderophores that sequester Fe from the soil. Despite microbial siderophores complexed with Fe could be an easily accessible Fe source for plants, the possible involvement of A. brasilense in improving Fe nutrition in plants suffering from the micronutrient deficiency has not been investigated yet. Within the present research, the characterization of the physiological and biochemical effects induced by Fe starvation and PGPR inoculation in cucumber plants (Cucumis sativus L. cv. Chinese Long) was carried out. The analyses of root exudates released by hydroponically grown plants highlighted that cucumber plants respond differently depending on the nutritional status. In addition, following the cultivation period on calcareous soil, also the root exudates found in the extracts suggested a peculiar behaviour of plants as a function of the treatment. Interestingly, the presence of the inoculum in soil allowed a faster recovery of cucumber plants from Fe-deficiency symptoms, i.e. increase in the chlorophyll content, in the biomass and in the Fe content of leaves. These observations might suggest a feasible application of

  6. Enhanced production of parthenocarpic cucumbers pollinated with stingless bees and Africanized honey bees in greenhouses

    Directory of Open Access Journals (Sweden)

    Euclides Braga Malheiros

    2013-12-01

    Full Text Available Crops have different levels of dependence on pollinators; this holds true even for cultivars of the same species, as in the case of cucumber (Cucumis sativus. The aim of this research was to assess the attractiveness of flowers of three Japanese parthenocarpic cucumber cultivars and evaluate the importance of Africanized bees (Apis mellifera, and the Brazilian native stingless bees, Jataí (Tetragonisca angustula and Iraí (Nannotrigona testaceicornis on fruit production. Several parameters, including frequency of bee visits to flowers as well as duration of nectar collection and fruit set were examined; additionally, fruit weight, length and diameter were evaluated. Three greenhouses located in Ribeirão Preto, SP, were used for planting three cucumber cultivars (Hokushin, Yoshinari and Soudai. The female flowers were more attractive than male flowers; however, Jataí bees were not observed visiting the flowers. The Africanized and the Iraí bees collected only nectar, with a visitation peak between 10 and 12h. Visits to female flowers had a longer duration than visits to male flower visits in all three cultivars. Africanized bee colonies declined due to loss of bees while in the greenhouse; the native stingless bee colonies did not suffer these losses. When bees were excluded, fruit set was 78%; however, when bees had access to the flowers, fruit set was significantly (19.2% higher. Fruit size and weight did not differ with and without bees. This demonstrates that even in parthenocarpic cucumber cultivars, which do not require pollination in order to from fruits, fruit production is significantly increased by bee pollination.

  7. Value, Market Preferences and Trade of Beche-De-Mer from Pacific Island Sea Cucumbers

    OpenAIRE

    Steven W Purcell

    2014-01-01

    Market preferences of natural resources contribute to shape their exploitation and production. Beche-de-mer, the product after gutting, cooking, salting and drying sea cucumbers, is exported worldwide to Asian dried seafood markets. A better understanding of the trade, value and market preferences of Pacific island beche-de-mer could identify critical postharvest processing techniques and management strategies for fisheries and aquaculture. Data were collected on export prices and trade of be...

  8. Bioactivity as an options value of sea cucumbers in the Egyptian Red Sea.

    Science.gov (United States)

    Lawrence, A J; Afifi, R; Ahmed, M; Khalifa, S; Paget, T

    2010-02-01

    The utility of a species can be divided into its direct, indirect, and options values. In the marine environment, direct consumptive values predominate and often lead to overexploitation at the expense of significant options values derived through bioprospecting for natural products. We surveyed the waters of the Egyptian Red Sea coast (Gulf of Aqaba [north] and the Red Sea [south]) for species of sea cucumbers and analyzed extracts from species for a range of bioactivities with potential biomedical applications. All habitat types were surveyed within these regions. We found 22 species of sea cucumber of which two, Holothuria fuscogilva and Holothuria flavomaculata, were recorded in Egypt for the first time. Although none of the species identified were unique to the Gulf of Aqaba, 10 species were only found in the Red Sea sector. Bioassay results showed that although no species had antibacterial activity, most extracts exhibited activity against Candida and Leishmania but were most active against a LoVo mammalian carcinoma cell line. Our most significant finding was the intraspecific variation in bioactivity in individuals collected from different habitat types and sectors of the coast. This variation may reflect the effect of environment on secondary metabolite production or may indicate significant genetic diversity between populations within a species. Our results indicate a potentially significant options value to sea cucumbers through bioprospecting. Given the importance of economic development in countries such as Egypt and the perceived low conservation value of invertebrates such as sea cucumbers, the linking of these factors to conservation is vital for the maintenance and sustainable exploitation of these animals.

  9. Aquaculture, Biotechnological and Seafood Resource Potential of Sea Cucumbers from the Peniche coast (Portugal)

    OpenAIRE

    Rita Alves Santos

    2014-01-01

    Sea cucumbers are highly marketable as food and medicinal product. This has resulted in an increasing overfishing and in a new interest in European species. In this work, the reproductive biology of Holothuria forskali and Holothuria mammata was performed by evaluating the gonadosomatic index and histological analyzes of the gonadal tubules. The biotechnological potential was assessed through the evaluation of the antioxidant, antimicrobial and antitumor potential. The antioxidant activity wa...

  10. Classification of suppressor additives based on synergistic and antagonistic ensemble effects

    Energy Technology Data Exchange (ETDEWEB)

    Broekmann, P., E-mail: peter.broekmann@iac.unibe.ch [BASF SE, Global Business Unit Electronic Materials, 67056 Ludwigshafen (Germany); Department of Chemistry and Biochemistry, University of Bern, Bern (Switzerland); Fluegel, A.; Emnet, C.; Arnold, M.; Roeger-Goepfert, C.; Wagner, A. [BASF SE, Global Business Unit Electronic Materials, 67056 Ludwigshafen (Germany); Hai, N.T.M. [Department of Chemistry and Biochemistry, University of Bern, Bern (Switzerland); Mayer, D. [BASF SE, Global Business Unit Electronic Materials, 67056 Ludwigshafen (Germany)

    2011-05-01

    Highlights: > Three fundamental types of suppressor additives for copper electroplating could be identified by means of potential transient measurements. > These suppressor additives differ in their synergistic and antagonistic interplay with anions that are chemisorbed on the metallic copper surface during electrodeposition. > In addition these suppressor chemistries reveal different barrier properties with respect to cupric ions and plating additives (Cl, SPS). - Abstract: Three fundamental types of suppressor additives for copper electroplating could be identified by means of potential transient measurements. These suppressor additives differ in their synergistic and antagonistic interplay with anions that are chemisorbed on the metallic copper surface during electrodeposition. In addition these suppressor chemistries reveal different barrier properties with respect to cupric ions and plating additives (Cl, SPS). While the type-I suppressor selectively forms efficient barriers for copper inter-diffusion on chloride-terminated electrode surfaces we identified a type-II suppressor that interacts non-selectively with any kind of anions chemisorbed on copper (chloride, sulfate, sulfonate). Type-I suppressors are vital for the superconformal copper growth mode in Damascene processing and show an antagonistic interaction with SPS (Bis-Sodium-Sulfopropyl-Disulfide) which involves the deactivation of this suppressor chemistry. This suppressor deactivation is rationalized in terms of compositional changes in the layer of the chemisorbed anions due to the competition of chloride and MPS (Mercaptopropane Sulfonic Acid) for adsorption sites on the metallic copper surface. MPS is the product of the dissociative SPS adsorption within the preexisting chloride matrix on the copper surface. The non-selectivity in the adsorption behavior of the type-II suppressor is rationalized in terms of anion/cation pairing effects of the poly-cationic suppressor and the anion-modified copper

  11. Development of a new cucumber reference material for pesticide residue analysis: feasibility study for material processing, homogeneity and stability assessment.

    Science.gov (United States)

    Grimalt, Susana; Harbeck, Stefan; Shegunova, Penka; Seghers, John; Sejerøe-Olsen, Berit; Emteborg, Håkan; Dabrio, Marta

    2015-04-01

    The feasibility of the production of a reference material for pesticide residue analysis in a cucumber matrix was investigated. Cucumber was spiked at 0.075 mg/kg with each of the 15 selected pesticides (acetamiprid, azoxystrobin, carbendazim, chlorpyrifos, cypermethrin, diazinon, (α + β)-endosulfan, fenitrothion, imazalil, imidacloprid, iprodione, malathion, methomyl, tebuconazole and thiabendazole) respectively. Three different strategies were considered for processing the material, based on the physicochemical properties of the vegetable and the target pesticides. As a result, a frozen spiked slurry of fresh cucumber, a spiked freeze-dried cucumber powder and a freeze-dried cucumber powder spiked by spraying the powder were studied. The effects of processing and aspects related to the reconstitution of the material were evaluated by monitoring the pesticide levels in the three materials. Two separate analytical methods based on LC-MS/MS and GC-MS/MS were developed and validated in-house. The spiked freeze-dried cucumber powder was selected as the most feasible material and more exhaustive studies on homogeneity and stability of the pesticide residues in the matrix were carried out. The results suggested that the between-unit homogeneity was satisfactory with a sample intake of dried material as low as 0.1 g. A 9-week isochronous stability study was undertaken at -20 °C, 4 °C and 18 °C, with -70 °C designated as the reference temperature. The pesticides tested exhibited adequate stability at -20 °C during the 9-week period as well as at -70 °C for a period of 18 months. These results constitute a good basis for the development of a new candidate reference material for selected pesticides in a cucumber matrix.

  12. Integrative Analyses of Nontargeted Volatile Profiling and Transcriptome Data Provide Molecular Insight into VOC Diversity in Cucumber Plants (Cucumis sativus).

    Science.gov (United States)

    Wei, Guo; Tian, Peng; Zhang, Fengxia; Qin, Hao; Miao, Han; Chen, Qingwen; Hu, Zhongyi; Cao, Li; Wang, Meijiao; Gu, Xingfang; Huang, Sanwen; Chen, Mingsheng; Wang, Guodong

    2016-09-01

    Plant volatile organic compounds, which are generated in a tissue-specific manner, play important ecological roles in the interactions between plants and their environments, including the well-known functions of attracting pollinators and protecting plants from herbivores/fungi attacks. However, to date, there have not been reports of holistic volatile profiling of the various tissues of a single plant species, even for the model plant species. In this study, we qualitatively and quantitatively analyzed 85 volatile chemicals, including 36 volatile terpenes, in 23 different tissues of cucumber (Cucumis sativus) plants using solid-phase microextraction combined with gas chromatography-mass spectrometry. Most volatile chemicals were found to occur in a highly tissue-specific manner. The consensus transcriptomes for each of the 23 cucumber tissues were generated with RNA sequencing data and used in volatile organic compound-gene correlation analysis to screen for candidate genes likely to be involved in cucumber volatile biosynthetic pathways. In vitro biochemical characterization of the candidate enzymes demonstrated that TERPENE SYNTHASE11 (TPS11)/TPS14, TPS01, and TPS15 were responsible for volatile terpenoid production in the roots, flowers, and fruit tissues of cucumber plants, respectively. A functional heteromeric geranyl(geranyl) pyrophosphate synthase, composed of an inactive small subunit (type I) and an active large subunit, was demonstrated to play a key role in monoterpene production in cucumber. In addition to establishing a standard workflow for the elucidation of plant volatile biosynthetic pathways, the knowledge generated from this study lays a solid foundation for future investigations of both the physiological functions of cucumber volatiles and aspects of cucumber flavor improvement.

  13. The effect of different methods of seed bed preparation on greenhouse cucumber yield and yield components

    Directory of Open Access Journals (Sweden)

    D. Momeni

    2010-12-01

    Full Text Available To investigate the effects of different methods of seed bed preparation on yield of greenhouse cucumber, a two-year long experiment was conducted as a randomized complete block design with four replications in Jiroft from 2004. Different methods of seed bed preparation were as follows: 1 ridge with 20 cm height and 50 cm width and 2 plant rows with 40 cm distance, 2 furrow with 20 cm depth and 50 cm width and 2 plant rows inside, with 40 cm distance, and 3 planting on flat area with 40 cm distance. The results showed that the effect of planting bed on yield of greenhouse cucumber was significant. Furrow and flat area increased yield significantly, compared to the ridge treatment. Analysis of yield components such as plant height, number of pickling fruits, number of leaves, photosynthetic area and number of flowers showed that they are all correlated with fruit yield. The number of pickling fruits was significantly more in furrow and flat area than in ridge treatment. The height of cucumber plants on flat bed was significantly higher than that of the other treatments. The number of leaves and photosynthetic area of plants on flat bed were significantly greater than those in the other treatments. The least dead plants due to fungi disease were observed in ridge treatment. In view of yield and its components under the condition of this experiment, it can be concluded that flat area and furrow treatments are better than ridge treatment.

  14. Response of wild bees (Hymenoptera: Apoidea: Anthophila) to surrounding land cover in Wisconsin pickling cucumber.

    Science.gov (United States)

    Lowenstein, D M; Huseth, A S; Groves, R L

    2012-06-01

    Cucumber (Cucumis sativus L.) is among the plants highly dependent on insect-mediated pollination, but little is known about its unmanaged pollinators. Both domestic and wild bee populations in central Wisconsin pickling cucumber fields were assessed using a combination of pan trapping and floral observations before and during bloom. Together with land cover analyses extending 2,000 m from field centers, the relationship of land cover components and bee abundance and diversity were examined. Over a 2-yr sample interval distributed among 18 experimental sites, 3,185 wild bees were collected representing >60 species. A positive association was found between both noncrop and herbaceous areas with bee abundance and diversity only during bloom. Response of bee abundance and diversity to land cover was strongest at larger buffers presumably because of the heterogeneous nature of the landscape and connectivity between crop and noncrop areas. These results are consistent with previous research that has found a weak response of wild bees to surrounding vegetation in moderately fragmented areas. A diverse community of wild bees is present within the fields of a commercial cucumber system, and there is evidence of floral visitation by unmanaged bees. This evidence emphasizes the importance of wild pollinators in fragmented landscapes and the need for additional research to investigate the effectiveness of individual species in pollen deposition.

  15. HANABA TARANU regulates the shoot apical meristem and leaf development in cucumber (Cucumis sativus L.).

    Science.gov (United States)

    Ding, Lian; Yan, Shuangshuang; Jiang, Li; Liu, Meiling; Zhang, Juan; Zhao, Jianyu; Zhao, Wensheng; Han, Ying-Yan; Wang, Qian; Zhang, Xiaolan

    2015-12-01

    The shoot apical meristem (SAM) is essential for continuous organogenesis in higher plants, while the leaf is the primary source organ and the leaf shape directly affects the efficiency of photosynthesis. HANABA TARANU (HAN) encodes a GATA3-type transcription factor that functions in floral organ development, SAM organization, and embryo development in Arabidopsis, but is involved in suppressing bract outgrowth and promoting branching in grass species. Here the function of the HAN homologue CsHAN1 was characterized in cucumber, an important vegetable with great agricultural and economic value. CsHAN1 is predominantly expressed at the junction of the SAM and the stem, and can partially rescue the han-2 floral organ phenotype in Arabidopsis. Overexpression and RNAi of CsHAN1 transgenic cucumber resulted in retarded growth early after embryogenesis and produced highly lobed leaves. Further, it was found that CsHAN1 may regulate SAM development through regulating the WUSCHEL (WUS) and SHOOT MERISTEMLESS (STM) pathways, and mediate leaf development through a complicated gene regulatory network in cucumber.

  16. Infectivity and complete nucleotide sequence of cucumber fruit mottle mosaic virus isolate Cm cDNA.

    Science.gov (United States)

    Rhee, Sun-Ju; Hong, Jin-Sung; Lee, Gung Pyo

    2014-07-01

    Three isolates of cucumber fruit mottle mosaic virus (CFMMV) were collected from melon, cucumber, and pumpkin plants in Korea. A full-length cDNA clone of CFMMV-Cm (melon isolate) was produced and evaluated for infectivity after T7 transcription in vitro (pT7CF-Cmflc). The complete CFMMV genome sequence of the infectious clone pT7CF-Cmflc was determined. The genome of CFMMV-Cm consisted of 6,571 nucleotides and shared high nucleotide sequence identity (98.8 %) with the Israel isolate of CFMMV. Based on the infectious clone pT7CF-Cmflc, a CaMV 35S-promoter driven cDNA clone (p35SCF-Cmflc) was subsequently constructed and sequenced. Mechanical inoculation with RNA transcripts of pT7CF-Cmflc and agro-inoculation with p35SCF-Cmflc resulted in systemic infection of cucumber and melon, producing symptoms similar to those produced by CFMMV-Cm. Progeny virus in infected plants was detected by RT-PCR, western blot assay, and transmission electron microscopy.

  17. Occurrence and molecular characterization of Cucumber green mottle mosaic virus in cucurbit crops of KPK, Pakistan

    Directory of Open Access Journals (Sweden)

    Asad Ali

    2014-12-01

    Full Text Available Field survey of the cucurbit crops revealed a high incidence of Cucumber green mottle mosaic virus (CGMMV in Khyber Pakhtunkhwa Province (KPK, Pakistan. Among the seven districts surveyed, average percent incidence of CGMMV was recorded up to 58.1% in district Nowshera, followed by 51.1% in district Charsada, 40.5% in district Swabi and 37.3% in district Mardan. In Swat and Dir districts average incidence CGMMV was recorded upto 31.2% and 29.4%, respectively. Among the different crops highest incidence in plain areas of KPK was recorded in bottle gourd (59.3% followed by 56.3% in Squash, 54.5% in Pumpkin, 45.5% in Melon, 41.7% in Cucumber and 29.9% in Sponge gourd. In Northern hilly areas highest incidence of CGMMV (52.9% was observed in pumpkin, followed by 49.6% in bottle gourd, 47.3% in squash, 45.1% in Melon 42.3% in cucumber and 41.6% in sponge gourd. Little variability was observed in the coat protein amino acid sequence identities of CGMMV Pakistan isolate, when compared with other reported isolates.

  18. Phytotoxicity of effluents from swine slaughterhouses using lettuce and cucumber seeds as bioindicators.

    Science.gov (United States)

    Gerber, Michel David; Lucia, Thomaz; Correa, Luciara; Neto, José Eduardo Pereira; Correa, Érico Kunde

    2017-08-15

    This study evaluated the phytotoxic effects of raw and treated effluents from a swine slaughterhouse on cucumber and lettuce seeds and determined correlations among physicochemical characteristics of such effluents and the germination of seeds used as bioindicators. Physicochemical parameters were characterized for both effluents and their phytotoxicity was determined through the germination index (GI), the root length (RL) and the number of germinated seeds (SG) for both plant species. The effluents treatment system was efficient to reduce the concentration of some physicochemical parameters to levels within those recommended by the Brazilian legislation, except for P, ammoniacal N and TKN concentration. Although phytotoxicity of the treated effluent was less in comparison to the raw effluent, the GI for cucumber and lettuce seeds submitted to each of the tested effluents was lower than 80%. Thus, both effluents were phytotoxic for the tested bioindicators (p<0.05). For lettuce seeds, the GI presented negative correlations (p<0.05) with the total Kjeldahl N (-0.93) and the surfactants concentration (-0.83) in the raw effluent. The Zn concentration in the treated effluent showed a negative correlation (p<0.05) with the GI of both lettuce (-0.63) and cucumber seeds (-0.64). Therefore, effluents from swine slaughterhouses may impair the germination of the evaluated plant species if used for agricultural purposes. Copyright © 2017 Elsevier B.V. All rights reserved.

  19. Cucumber Rhizosphere Microbial Community Response to Biocontrol Agent Bacillus subtilis B068150

    Directory of Open Access Journals (Sweden)

    Lihua Li

    2015-12-01

    Full Text Available Gram-positive bacteria Bacillus subtilis B068150 has been used as a biocontrol agent against the pathogen Fusarium oxysporum cucumerinum. Cucumber was grown in three soils with strain B068150 inoculated in a greenhouse for 90 days, and the colonization ability of strain B068150 in cucumber rhizosphere and non-rhizosphere soils was determined. Changes in total bacteria and fungi community composition and structures using denaturing gradient gel electrophoresis (DGGE and sequencing were determined. Colony counts showed that B068150 colonization in the rhizosphere was significantly higher (p < 0.001 than in non-rhizosphere soils. Based on our data, the introduction of B. bacillus B068150 did not change the diversity of microbial communities significantly in the rhizosphere of three soils. Our data showed that population density of B068150 in clay soil had a significant negative correlation on bacterial diversity in cucumber rhizosphere in comparison to loam and sandy soils, suggesting that the impact of B068150 might be soil specific.

  20. Investigation on diazinon and oxydemeton-methyl residues in cucumbers grown in Kerman greenhouses.

    Science.gov (United States)

    Ganjeizadeh Rohani, Fatemeh; Mahdavi, Vahideh; Aminaei, M Mehdi

    2014-07-01

    Pesticides are considered as the most polluting substances. The residue of pesticides in agricultural crops, especially in greenhouse harvests, has been reported critical. Cucumber, considered as a vegetable, is an agricultural product which is commonly found in the Iranian food basket. The current study aims to assess the level of diazinon and oxydemeton-methyl existing in cucumbers sampled from Kerman greenhouses. The pesticide residue was extracted by acetone and dichloromethane. The extracts were cleaned up according to the solid-phase extraction method. The pesticide residues were then determined by capillary gas chromatography with nitrogen-phosphorus detection. The recoveries were 83 and 85 %, the limit of detection was 0.028 and 0.034 mg/kg, and the limits of qualification were 0.093 and 0.113 mg/kg for diazinon and oxydemeton-methyl in cucumber samples, respectively. The median of diazinon residue was detected 0.582 mg/kg, which was 11.64 times the national maximum residue limit (MRL) (0.05 mg/kg), and the median for oxydemeton-methyl was 1.910 mg/kg, being 1.91 times the MRL (1 mg/kg).

  1. Higher Chilling-Tolerance of Grafted-Cucumber Seedling Leaves upon Exposure to Chilling Stress

    Institute of Scientific and Technical Information of China (English)

    LI Jian-yong; TIAN Hai-xia; LI Xin-guo; MENG Jing-jing; HE Qi-wei

    2008-01-01

    The roots of figleaf gourd (Cucurbita ficifolia, as rootstock) could improve the resistance of cucumber plants (Cucumis sativus L. cv. Jinyan 4, as scion) to low temperature. In this experiment, the root activity and photosynthetic activity of photosystems in the own-rooted and grafted-cucumber plants were studied at chilling temperature (4℃) under low irradiance (100 μmol m-2 s-1 PFD). Compared with dark adaptation seedlings, the chlorophyll a fluorescence transient curve and the oxidizable P700 (P700+) of both the own-rooted and grafted seedlings decreased, and PS2 and PSl of the own-rooted seedling leaves were more inhibited than that of grafted ones at the end of chilling stress. The reduced triphenyltetrazolium chloride (TTC), which was used to reflect the root activity, kept stable in grafted seedling roots at the end of chilling stress, while it decreased noticeably in the own-rooted seedling roots. These results implied that the root system activity of the grafted seedling roots was higher than that of the own-rooted ones. Superoxide dismutase (SOD) activity was higher in both the grafted seedling roots and leaves than that in own-rooted seedlings at both room temperature and chilling temperature. Upon exposure to chilling stress, the malondialdehyde (MDA) content, which reflects the degree of lipid peroxidation, increased markedly in the own-rooted seedling roots and leaves and kept stable in the grafted-cucumber seedlings.

  2. Dissipation behaviour, processing factors and risk assessment for metalaxyl in greenhouse-grown cucumber.

    Science.gov (United States)

    Ramezani, Mohammad Kazem; Shahriari, Dariush

    2015-04-01

    Cucumber is widely cultivated in Iran, and the application of systemic and protective fungicides is the main choice of disease treatment, particularly in greenhouse-grown systems. In this research, cucumber fruits were harvested at 1 h to 25 days after the last application to determine the residue and dissipation behaviour of metalaxyl. The effects of peeling and storage (at 3 °C for 4 days) on metalaxyl residue reduction were also assessed. Samples were extracted by the QuEChERS procedure then analysed using liquid chromatography-tandem mass spectrometry. The dissipation of metalaxyl residues approximately fitted a first-order kinetic model, obtaining half-life values of 2.2 and 3.8 days and preharvest interval values of 5.2 and 12.5 days at the recommended dose (2 kg ha(-1) ) and double (4 kg ha(-1) ) dose respectively. The processing factor values for peeling and storage were 0.50 and 0.93 respectively, showing that storage had little effect on residue reduction compared with peeling. The higher content of metalaxyl residues in flesh showed its penetration from the skin into the flesh. The results provided more understanding of fungicide distribution as well as the effective role of peeling in reducing residues in cucumber fruits. © 2014 Society of Chemical Industry.

  3. Pathogenic Fungi Transmitted Through Cucumber Seeds and Safely Elimination by Application of Peppermint Extract and Oil

    Directory of Open Access Journals (Sweden)

    Eman S.H. FARRAG

    2012-08-01

    Full Text Available Diseases induced by Fusarium, like damping-off and wilt on cucumber, are serious problems around the world. Samples of cucumber seeds were collected from commercial markets in Egypt and tested for seed-borne fungi. In order to detect the maximum number of internal and external seed-borne fungi, agar plate examination of disinfected and non-disinfected seeds were used. Two species of Fusarium were the most frequent and predominant fungi. Facultative parasites of the genera Alternaria, Rhizoctonia, Helminthosporium and Penicillium were also found. A total 33 isolates of Fusarium spp. were obtained using Komadas selective medium. Fusarium oxysporum and F. solani were highly frequent. Pathogenicity test indicated that, F. oxysporum isolate (Fem8 was the main causal organism of pre- and post-emergence damping off. Furthermore, it occurred in all seed parts tested. Some infected seeds germinate, but they were either rapidly overgrown by F. oxysporum or they developed into a diseased seedling. The water extract of garlic, peppermint and rheum completely inhibited the conidiospore germination and mycelial growth of F. oxysporum at tested conc. 3, 2 and 3%, respectively. Soaked seeds in 2% peppermint extract and evaporated seeds by vapor of peppermint oil caused a highly reduction in the infection and reduced transmission of the referred fungi from seeds to the growing seedlings. The vigor of cucumber seedlings raised from the treated seeds was better than that developed from untreated ones.

  4. UV-B radiation does not limit carbohydrate level and carbohydrate metabolism in cucumber leaves

    Directory of Open Access Journals (Sweden)

    Magdalena Rybus-Zając

    2014-08-01

    Full Text Available Cucumber is a vegetable exhibiting relatively high sensitivity to environmental stress factors. When it is grown outdoors, from early stages of development there is a real risk of exposure to elevated UV-B radiation. In order to explain the effects of time-dependent UV-B doses on carbohydrate level and metabolism, the photosynthetic activity, accumulation of carbohydrates and activities of carbohydrate-related enzymes were determined in the cucumber leaves. Elevated UV-B radiation led to an increase in the rate of photosynthesis, which was reflected by an increase in SPAD values. Higher photosynthetic activity resulted in an increase in levels of soluble sugars. In view of the above-mentioned results, radiation stress led to a UV-B time-dependent dose increase in the activity of two enzymes decomposing carbohydrate: invertase and glucosidase. Our results suggest that the exposure of cucumber plants to supplemental UV-B doses does not limit the availability of the photoassimilate. Carbohydrates are required to provide not only respiratory energy for protection, maintenance (and repair of plant activity and structure, but also provide biosynthetic carbon skeletons for secondary metabolite synthesis

  5. Developmental Characteristics and Cinnamic Acid Resistance of Root Border Cells in Cucumber and Figleaf Gourd Seedlings

    Institute of Scientific and Technical Information of China (English)

    QIAO Yong-xu; ZHANG Yong-ping; ZHANG Hong-xin; TIAN Yong-qiang; GAO Li-hong

    2013-01-01

    Root border cells (RBCs) originate from the root tip epidermis and surround the root apices. In this study, we evaluated the developmental characteristics and the roles of RBCs in protection of root apices of cucumber and ifgleaf gourd seedlings from CA toxicity. The formation of RBCs and the emergence of the root tip occurred almost simultaneously in root apices of cucumber and ifgleaf gourd seedlings. CA ranging from 0 to 0.25 mol L-1 inhibited root elongation and decreased root cell viability in the root tip, moreover the inhibitory effects of CA were more signiifcant in the CA-sensitive cucumber than in the CA-tolerant ifgleaf gourd. Removal of RBCs from root tips led to more severe CA induced inhibition of root elongation and decline in root cell viability. Increasing CA levels and treatment time decreased the relative viability of attached and detached RBCs. CA also induced a thicker mucilage layer surrounding attached RBCs of both species. Additionally, a signiifcantly higher relative cell viability of attached RBCs and thicker mucilage layers were observed in ifgleaf gourd. These results suggest that RBCs play an important role in protecting root tips from CA toxicity.

  6. Photosynthetic Characteristics and Ultrastructure of Chloroplast of Cucumber Under Low Light Density in Solar-Greenhouse

    Institute of Scientific and Technical Information of China (English)

    AI Xi-zhen; GUO Yan-kui; CHEN Li-ping; XING Yu-xian

    2004-01-01

    The photosynthetic characteristics and ultrastructure of chloroplast of cucumber in solargreenhouse were studied. The result showed that the photosynthetic rate (Pn), photosynthetic ability (A350), carboxylation efficiency, light saturation point and light compensation point all declined remarkably under lowlight density, indicating that the photosynthetic characteristics of cucumber were closely related to light environment. Under iow light density, the minimal fluorescence (Fo), alterable fluorescence (Fv), photochemical efficiency of PS Ⅱ (Fv/Fm), steady fluorescence in light (Fs), maximal fluorescence (Fm′) and actual efficiency of PS Ⅱ (φPSⅡ)etc increased, indicating that the photochemical activity and efficiency for solar energy transformation enhanced, thus the light proportion used to electron transport also increased. The chlorophyll a, b, a/b and carotenoid of shading leaves decreased. However, the depressed extent of Chl a and Chl a/b were obviously larger than that of Chl b. The number of chloroplast and starch grain in cucumber leaves descended, but that of grana and lamella increased as a shaded result. The size of chloroplast and starch grain of shading leaves minished.

  7. Effect of some Trichoderma spp. isolates on promoting growth of cucumber seedlings under greenhouse conditions

    Directory of Open Access Journals (Sweden)

    M. Taghinasab Darzi

    2012-12-01

    Full Text Available This experiment was performed to investigate the effect of some Trichoderma spp. isolates as growth promoters of cucumber (Cucumis sativus L. seedlings under greenhouse conditions. Inoculai of 19 Thrichoderma spp. isolates were prepared from disinfected wheat grain. The upper half of the soil in pots (containing field soil and sand was mixed with these inoculai at 3% ratio and the pots were irrigated with tap water for 28 days. After four weeks, the seedlings were sampled for growth comparison on stem length, root length and total fresh weight. The results showed that some isolates improved significantly the cucumber seedlings’ growth and others had inhibitory effect. Application of Trichoderma spp. 17 and T. longibraciatum increased stem length more than 74% as compared to control. Also, these isolates increased significantly P<0.05 the total fresh weight about 40% and 25%, respectively, as compared to control. Furthermore, Trichoderma sp. 19 decreased significantly the stem length, root length and total fresh weight as compared to control. These results show the ability of Persian Trichoderma spp. isolates in promoting cucumber growth and its potential for other plants.

  8. Pathogenic Fungi Transmitted Through Cucumber Seeds and Safely Elimination by Application of Peppermint Extract and Oil

    Directory of Open Access Journals (Sweden)

    Eman S.H. FARRAG

    2012-08-01

    Full Text Available Diseases induced by Fusarium, like damping-off and wilt on cucumber, are serious problems around the world. Samples of cucumber seeds were collected from commercial markets in Egypt and tested for seed-borne fungi. In order to detect the maximum number of internal and external seed-borne fungi, agar plate examination of disinfected and non-disinfected seeds were used. Two species of Fusarium were the most frequent and predominant fungi. Facultative parasites of the genera Alternaria, Rhizoctonia, Helminthosporium and Penicillium were also found. A total 33 isolates of Fusarium spp. were obtained using Komada�s selective medium. Fusarium oxysporum and F. solani were highly frequent. Pathogenicity test indicated that, F. oxysporum isolate (Fem8 was the main causal organism of pre- and post-emergence damping off. Furthermore, it occurred in all seed parts tested. Some infected seeds germinate, but they were either rapidly overgrown by F. oxysporum or they developed into a diseased seedling. The water extract of garlic, peppermint and rheum completely inhibited the conidiospore germination and mycelial growth of F. oxysporum at tested conc. 3, 2 and 3%, respectively. Soaked seeds in 2% peppermint extract and evaporated seeds by vapor of peppermint oil caused a highly reduction in the infection and reduced transmission of the referred fungi from seeds to the growing seedlings. The vigor of cucumber seedlings raised from the treated seeds was better than that developed from untreated ones.

  9. Molecular cloning and characterization of violaxanthin de-epoxidase (CsVDE in cucumber.

    Directory of Open Access Journals (Sweden)

    Xin Li

    Full Text Available Violaxanthin de-epoxidase (VDE plays an important role in protecting the photosynthetic apparatus from photo-damage by dissipating excessively absorbed light energy as heat, via the conversion of violaxanthin (V to intermediate product antheraxanthin (A and final product zeaxanthin (Z under high light stress. We have cloned a violaxanthin de-epoxidase gene (CsVDE from cucumber. The amino acid sequence of CsVDE has high homology with VDEs in other plants. RT-PCR analysis and histochemical staining show that CsVDE is expressed in all green tissues in cucumber and Arabidopsis. Using GFP fusion protein and immunogold labeling methods, we show that CsVDE is mainly localized in chloroplasts in cucumber. Under high light stress, relative expression of CsVDE and the de-epoxidation ratio (A+Z/(V+A+Z is increased rapidly, and abundance of the gold particles was also increased. Furthermore, CsVDE is quickly induced by cold and drought stress, reaching maximum levels at the 2(nd hour and the 9(th day, respectively. The ratio of (A+Z/(V+A+Z and non-photochemical quenching (NPQ is reduced in transgenic Arabidopsis down-regulated by the antisense fragment of CsVDE, compared to wild type (WT Arabidopsis under high light stress. This indicates decreased functionality of the xanthophyll cycle and increased sensitivity to photoinhibition of photosystem II (PSII in transgenic Arabidopsis under high light stress.

  10. Molecular cloning and characterization of violaxanthin de-epoxidase (CsVDE) in cucumber.

    Science.gov (United States)

    Li, Xin; Zhao, Wenchao; Sun, Xiyan; Huang, Hongyu; Kong, Lingcui; Niu, Dandan; Sui, Xiaolei; Zhang, Zhenxian

    2013-01-01

    Violaxanthin de-epoxidase (VDE) plays an important role in protecting the photosynthetic apparatus from photo-damage by dissipating excessively absorbed light energy as heat, via the conversion of violaxanthin (V) to intermediate product antheraxanthin (A) and final product zeaxanthin (Z) under high light stress. We have cloned a violaxanthin de-epoxidase gene (CsVDE) from cucumber. The amino acid sequence of CsVDE has high homology with VDEs in other plants. RT-PCR analysis and histochemical staining show that CsVDE is expressed in all green tissues in cucumber and Arabidopsis. Using GFP fusion protein and immunogold labeling methods, we show that CsVDE is mainly localized in chloroplasts in cucumber. Under high light stress, relative expression of CsVDE and the de-epoxidation ratio (A+Z)/(V+A+Z) is increased rapidly, and abundance of the gold particles was also increased. Furthermore, CsVDE is quickly induced by cold and drought stress, reaching maximum levels at the 2(nd) hour and the 9(th) day, respectively. The ratio of (A+Z)/(V+A+Z) and non-photochemical quenching (NPQ) is reduced in transgenic Arabidopsis down-regulated by the antisense fragment of CsVDE, compared to wild type (WT) Arabidopsis under high light stress. This indicates decreased functionality of the xanthophyll cycle and increased sensitivity to photoinhibition of photosystem II (PSII) in transgenic Arabidopsis under high light stress.

  11. Purification, physico-chemical characterization and thermodynamics of chitooligosaccharide binding to cucumber (Cucumis sativus) phloem lectin.

    Science.gov (United States)

    Nareddy, Pavan Kumar; Bobbili, Kishore Babu; Swamy, Musti J

    2017-02-01

    A chitooligosaccharide-specific lectin has been purified from the phloem exudate of cucumber (Cucumis sativus) by affinity chromatography on chitin. The molecular weight of the cucumber phloem lectin (CPL) was determined as 51912.8Da by mass spectrometry whereas SDS-PAGE yielded a single band with a subunit mass of 26kDa, indicating that the protein is a homodimer. Peptide mass fingerprinting studies strongly suggest that CPL is identical to the 26kDa phloem protein 2 (PP2) from cucumber. CD spectroscopy indicated that CPL is a predominantly β-sheets protein. Hemagglutination activity of CPL was mostly unaffected between 4 and 90°C and between pH 4.0 and 10.0, indicating functional stability of the protein. Isothermal titration calorimetric studies indicate that the CPL dimer binds to two chitooligosaccharide ((GlcNAc)2-6) molecules with association constants ranging from 1.0×10(3) to 17.5×10(5)M(-1). The binding reaction was strongly enthalpy driven (ΔHb=-ve) with negative contribution from binding entropy (ΔSb=-ve). The enthalpy-driven nature of binding reactions suggests that hydrogen bonding and van der Waals interactions stabilize the CPL-chitooligosaccharide association. Enthalpy-entropy compensation was observed for the CPL-chitooligosaccharide interaction, indicating that water molecules play an important role in the binding process. Copyright © 2016 Elsevier B.V. All rights reserved.

  12. Humic-Like Substances from Different Compost Extracts Could Significantly Promote Cucumber Growth

    Institute of Scientific and Technical Information of China (English)

    XU Da-Bing; WANG Qiu-Jun; WU Yun-Cheng; YU Guang-Hui; SHEN Qi-Rong; HUANG Qi-Wei

    2012-01-01

    The effects of direct extracts of compost (DEC),aerated fermentation extracts of compost (AFEC) and non-aerated fermentation extracts of compost (NAFEC) on cucumber growth and the action mechanisms were evaluated based on the structure and activity analysis of humic-like substances.AFEC increased cucumber growth most significantly,followed by DEC and NAFEC,which was insignificant compared to the control treatment.Humic-like substances from compost extracts played an important role in promoting cucumber growth.Application of humic-like substances stimulated auxin-like activity and increased chlorophyll content and nitrogen accumulation in plants.The positive auxin-like activity of humic-like substances could be attributed to the relative distribution of special carbon groups,such as those with a large amount of peptidic and carbohydratic groups or with a low content of phenolic groups.In conclusion,the best growth promotion by application of AFEC was mainly attributed to the humic-like substances in the AFEC.

  13. Diets Containing Sea Cucumber (Isostichopus badionotus) Meals Are Hypocholesterolemic in Young Rats

    Science.gov (United States)

    Olivera-Castillo, Leticia; Davalos, Alberto; Grant, George; Valadez-Gonzalez, Nina; Montero, Jorge; Barrera-Perez, Hirian Alonso Moshe; Chim-Chi, Yasser; Olvera-Novoa, Miguel Angel; Ceja-Moreno, Víctor; Acereto-Escoffie, Pablo; Rubio-Piña, Jorge; Rodriguez-Canul, Rossanna

    2013-01-01

    Sea cucumber is widely consumed as a putative functional food. It contains many biologically-active substances, but only limited research on its properties in vivo has been done. The effects of different meals containing Isostichopus badionotus, a sea cucumber from southeast Mexico, on growth performance and body lipid profile in young rats were analyzed. Sea cucumber body wall was either lyophilized, cooked (100 °C, 1 h in water) and lyophilized, or oven-dried (70 °C for 12 h). It was then ground and incorporated into cholesterol-containing diets. I. badionotus meals supported growth and improved lipid profile in rats. In particular, serum cholesterol, low density lipoproteins, triglycerides concentration and atherogenic index values were greatly reduced by some I. badionotus containing diets. Liver total lipids, triglycerides and cholesterol were also reduced. Cooking or heat-treatment of the meals lowered but did not abolish their hypolipidemic potency. Gene expression analysis of several key genes involved in cholesterol and lipid metabolism in liver showed that diets containing I. badionotus repressed the induction of key genes associated with dyslipidemia exerted by cholesterol supplementation. Consumption of I. badionotus from the Yucatan Peninsula is beneficial for dyslipidemia, although biological effect is clearly dependent on preparation method. PMID:24260223

  14. Impact of Methyl Jasmonate on Enhancing Chilling Tolerance of Cucumber (Cucumis sativus L. Seedlings

    Directory of Open Access Journals (Sweden)

    F. Saydpour

    2016-12-01

    Full Text Available Cucumber is a warm season crop that suffers from chilling injury at temperatures below 10°C. In recent years, jasmonates have been used for reduction of chilling injuries in plants. An experiment was, therefore, conducted to test whether methyl jasmonate (MeJA application at various concentrations (0, 0.05, 0.1 and 0.15 mM through seed soaking or foliar spray would protect cucumber seedlings, subjected to chilling stress. Results showed that MeJA application decreased chilling index, ion leakage, malondialdehyde content and hydrogen peroxide free radical and increased growth parameters, proline contents, chlorophylls contents and antioxidant activity. Although, seed soaking method provided better protection compared to foliar spray method, the highest cold tolerance was obtained with 0.15mM MeJA application in both application methods that caused low level of chilling index (1.67, malondialdehyde content (0.11 nm g-1 FW, hydrogen peroxide free radical (0.22 nm g-1 FW and ion leakage (32.87%. In general, it may be concluded that MeJA could be used effectively to protect cucumber seedling from damaging effects of chilling stress at the early stages of growth.

  15. Partial purification of elicitors from Lentinula edodes basidiocarps protecting cucumber seedlings against Colletotrichum lagenarium

    Directory of Open Access Journals (Sweden)

    Di Piero Robson M.

    2006-01-01

    Full Text Available The shiitake mushroom (Lentinula edodes has been used in research involving the prevention and the control of human and plant diseases. In cucumber plants, treated with aqueous extracts from mushroom basidiocarps, there was a reduction in anthracnose severity caused by Colletotrichum lagenarium, and an increase in peroxidase activity in the leaves. With the aim of obtaining molecules of agronomic interest, the crude aqueous extract from L. edodes basidiocarp was fractioned with ammonium sulfate. The fraction corresponding to 40-80% of saturation (p40-80, the most effective in reducing anthracnose on cucumber cotyledons, was submitted to anion exchange chromatography (AEC. After AEC, six protein peaks were obtained and the peak V, containing 34% of the proteins present in p40-80, induced peroxidase increase in the cucumber cotyledons besides reducing anthracnose severity. Separation of peak V proteins by SDS-gel electrophoresis revealed the presence of more than one band in the gel. Thus, a partial purification of elicitors present in the L. edodes basidiocarp was achieved.

  16. 6-Benzylaminopurine alleviates chilling injury of postharvest cucumber fruit through modulating antioxidant system and energy status.

    Science.gov (United States)

    Chen, Bingxia; Yang, Huqing

    2013-06-01

    6-Benzylaminopurine (6-BA) has a close relationship with the stress resistance of plants. Little research has been carried out on the effects of 6-BA on the cold resistance of postharvest fruits and vegetables. Therefore the aim of the present study was to evaluate the effects of 6-BA on chilling injury (CI), antioxidant system and energy status in cucumber during storage. The results showed that 6-BA at 50 mmol L(-1) was most effective to restrain CI in cucumber fruit. Fruits treated with 50 mmol L(-1) 6-BA maintained higher levels of chlorophyll, ascorbic acid, total phenolics and total antioxidant capacity. Furthermore, this treatment reduced the increases in membrane permeability and lipid peroxidation, delayed the increases in both rate of O2•- production and H2O2 content and increased the activities of superoxide dismutase (SOD), catalase (CAT), ascorbate peroxidase (APX) and glutathione reductase (GR) under chilling stress. The treatment also increased the content of adenosine triphosphate (ATP) and resulted in a higher level of energy charge. These results indicated that 6-BA alleviated CI in cucumber fruit through improving antioxidant enzyme activities and total antioxidant capacity and maintaining higher levels of ATP content and energy charge. © 2012 Society of Chemical Industry.

  17. Effects of different microbes on fermenting feed for sea cucumber ( Apostichopus japonicus)

    Science.gov (United States)

    Jiang, Yan; Wang, Yingeng; Mai, Kangsen; Zhang, Zheng; Liao, Meijie; Rong, Xiaojun

    2015-10-01

    The effects of different microbes on fermenting feed for sea cucumber ( Apostichopus japonicus) were compared to select the optimal fermentation strain in this study. Saccharomgces cerevisae, Candida utilis, Bacillus subtilis and Geotrichum candidum were independently added into the experimental compound feed, while only saline was mixed with the control feed. The fermentation treatments were inoculated with 10% seed solution under the condition of 25°C and 70% water content, which lasted for 5 days to elucidate the optimal microbe strain for fermenting effect. Physicochemical indexes and sensorial characteristics were measured per day during the fermentation. The indexes included dry matter recovery (DMR), crude protein (CP), the percentage of amino acid nitrogen to total nitrogen (AA-N/tN), the percentage of ammonia nitrogen to total nitrogen (NH3-N/tN), and the ratio of fermentation strains and vibrios to the total microbes, color, smell and viscosity. The results showed that DMR, CP and AA-N/tN of the S. cerevisae group reached the highest level on day 3, but the ratio of fermentation strain was second to C. utilis group. In addition, its NH3-N/tN and the ratio of vibrios were maintained at low levels, and the sensory evaluation score including smell, color and viscosity was the highest in S. cerevisae group on day 3. Therefore, S. cerevisae could be the optimal strain for the feed fermentation for sea cucumber. This research developed a new production method of fermentation feed for sea cucumber.

  18. Outbreak of Salmonella Oslo Infections Linked to Persian Cucumbers - United States, 2016.

    Science.gov (United States)

    Bottichio, Lyndsay; Medus, Carlota; Sorenson, Alida; Donovan, Danielle; Sharma, Reeti; Dowell, Natasha; Williams, Ian; Wellman, Allison; Jackson, Alikeh; Tolar, Beth; Griswold, Taylor; Basler, Colin

    2016-12-30

    In April 2016, PulseNet, the national molecular subtyping network for foodborne disease surveillance, detected a multistate cluster of Salmonella enterica serotype Oslo infections with an indistinguishable pulsed-field gel electrophoresis (PFGE) pattern (XbaI PFGE pattern OSLX01.0090).* This PFGE pattern was new in the database; no previous infections or outbreaks have been identified. CDC, state and local health and agriculture departments and laboratories, and the Food and Drug Administration (FDA) conducted epidemiologic, traceback, and laboratory investigations to identify the source of this outbreak. A total of 14 patients in eight states were identified, with illness onsets occurring during March 21-April 9, 2016. Whole genome sequencing, a highly discriminating subtyping method, was used to further characterize PFGE pattern OSLX01.0090 isolates. Epidemiologic evidence indicates Persian cucumbers as the source of Salmonella Oslo infections in this outbreak. This is the fourth identified multistate outbreak of salmonellosis associated with cucumbers since 2013. Further research is needed to understand the mechanism and factors that contribute to contamination of cucumbers during growth, harvesting, and processing to prevent future outbreaks.

  19. 不同轮作模式对日光温室黄瓜生长的影响%Cucumber growth in solar greenhouse affected by rotation modes

    Institute of Scientific and Technical Information of China (English)

    顾大路; 王伟中; 孙爱侠; 杨文飞; 杜小凤; 吴传万; 彭杰

    2016-01-01

    Six types of farming patterns ( rice-cucumber, water spinach-cucumber, water fennel-cucumber, straw mushroom-cucumber, cowpea-cucumber and crop free-cucumber) were employed to investigate the effects of rotation modes on cucumber yield, commodity, quality and disease resistance in solar greenhouse. Compared to crop free-cucumber mode other five rotation modes improved cucumber growth, cucumber yield and quality, among which, rice-cucumber, water spinach-cu-cumber and water fennel-cucumber rotation modes presented the greatest effects, followed by straw mushroom-cucumber and cowpea-cucumber modes. The rice-cucumber, water spinach-cucumber, water fennel-cucumber and straw mushroom-cucumber rotation modes mitigated the occurence of fusarium wilt, root rot and root knot nematode disease. Since the cucumber-aquatic crops rotation mode can improve cucumber growth, yield, commodity and quality, mitigate disease occurrence, it is a poten-tial technical measure in overcoming the continuous cropping obstacle of cucumber in solar greenhouse.%为了解不同轮作模式对日光温室黄瓜生长及病害发生的影响,分别以夏季种植水稻、空心菜(水栽)、水芹、草菇、豇豆、夏季空闲的日光温室为对象,观察夏季种植不同作物后下茬日光温室黄瓜的产量、商品性、品质及病害发生的情况。结果表明,与夏季闲棚相比,不同轮作模式有促进黄瓜生长、增加黄瓜产量和提高黄瓜品质的效果,其中以黄瓜与水稻、空心菜(水栽)、水芹轮作模式的增产和提高品质的效果最好,其次是黄瓜与草菇轮作,第三是黄瓜与豇豆轮作;黄瓜与水稻、空心菜、水芹及草菇轮作可以减轻枯萎病、根腐病、根结线虫病的发生,黄瓜与豇豆轮作对日光温室黄瓜病害的发生没有减轻效果。说明在日光温室内种植水生作物或水生栽培可以促进下茬黄瓜的生长,增加黄瓜产量,提高黄瓜商品性

  20. The new research on tumor suppressor gene in hepatocellular carcinoma

    Institute of Scientific and Technical Information of China (English)

    JI Yu-bin; YANG Hai-fan; YU Lei; PANG lin-lin; LI Hai-jiao; LIU Guang-da

    2008-01-01

    Hepatocellular carcinoma (HCC) is one of the leading causes of cancer-related death in the world. The carcinogenesis of HCC is multifactorial, multifunctional and multistage. Tumor suppressor gene therapy is one of the strategies, it is mainly used to make use of tumor suppressor gene groups which can inhibit the cell growth, to prevent the expression of oncogenes or to resume the function of anti-oncogenes. But so far, there is not a particular gene to be a main tumor suppressor gene in HCC. Therefore, it is necessary to study on the new anti-oncogenes to explain pathogenesis of liver cancer and seek for the newly effective target to carry on liver cancer gene therapy. PTEN (phosphatase and tensin homolog deleted on chromosome ten) was discovered as a tumor suppressor gene. It functions as a protein tyrosine phosphatase and as a lipid phosphatase. As a lipid phosphatase, PTEN antagonizes PI3K/Akt signaling by dephosphorylating the D3 position of the inositol ring of phosphatidylinositol 3, 4, 5-trisphosphate(PIP3), to generate phosphatidylinositol-4, 5,- biphosphate(PIP2). On the other hand, as a protein tyrosine phosphatase, PTEN can dephosphorylate itself, focal adhesion kinase (FAK) and the platelet derived growth factor receptor, involves in the migration, adhension of cells. Many researches have been testified that there is a higher frequency of negative expression of PTEN protein in hepatocellular carcinoma, the negative correlation between expression of PTEN gene and differential grade, clinic stage of HCC indicated that in activation of PTEN gene maybe a late incidence in the development of hepatocellular carcinoma and may play an important role in the genesis and development of some hepatocellular carcinoma. KLF6, a member of Krupple-like gene family, a ubiquitously expressed zinc finger transcription factor, has an important role in regulating cell growth and differentiation. Several experiments have been proved that the genetic events of tumor

  1. Transgenic cucumbers harboring the 54-kDa putative gene of Cucumber fruit mottle mosaic tobamovirus are highly resistant to viral infection and protect non-transgenic scions from soil infection.

    Science.gov (United States)

    Gal-On, Amit; Wolf, Dalia; Antignus, Yehezkel; Patlis, Larisa; Ryu, Ki Hyun; Min, Byoung Eun; Pearlsman, Malenia; Lachman, Oded; Gaba, Victor; Wang, Yongzeng; Shiboleth, Yoel Moshe; Yang, Jee; Zelcer, Aaron

    2005-02-01

    Cucumber fruit mottle mosaic tobamovirus (CFMMV) causes severe mosaic symptoms and yellow mottling on leaves and fruits and, occasionally, severe wilting of cucumber (Cucumis sativus L.) plants. No genetic source of resistance against this virus has been identified in cucumber. The gene coding for the putative 54-kDa replicase gene of CFMMV was cloned into an Agrobacterium tumefaciens binary vector, and transformation was performed on cotyledon explants of a parthenocarpic cucumber cultivar. R1 seedlings were screened for resistance to CFMMV by symptom expression, back inoculation on an alternative host and ELISA. From a total of 14 replicase-containing R1 lines, eight resistant lines were identified. Line 144--homozygous for the putative 54-kDa replicase gene--was immune to CFMMV infection by mechanical and graft inoculation, and to root infection following planting in CFMMV-infested soil. A substantial delay of symptom appearance was observed following infection by three additional cucurbit-infecting tobamoviruses. When used as a rootstock, line I44 protected susceptible cucumber scions from soil infection by CFMMV. This paper is the first report on protection of a susceptible cultivar against a soil-borne viral pathogen, by grafting onto a transgenic rootstock.

  2. Ectopic Expression of CsCTR1, a Cucumber CTR-Like Gene, Attenuates Constitutive Ethylene Signaling in an Arabidopsis ctr1-1 Mutant and Expression Pattern Analysis of CsCTR1 in Cucumber (Cucumis sativus

    Directory of Open Access Journals (Sweden)

    Beibei Bie

    2014-09-01

    Full Text Available The gaseous plant hormone ethylene regulates many aspects of plant growth, development and responses to the environment. Constitutive triple response 1 (CTR1 is a central regulator involved in the ethylene signal transduction pathway. To obtain a better understanding of this particular pathway in cucumber, the cDNA-encoding CTR1 (designated CsCTR1 was isolated from cucumber. A sequence alignment and phylogenetic analyses revealed that CsCTR1 has a high degree of homology with other plant CTR1 proteins. The ectopic expression of CsCTR1 in the Arabidopsis ctr1-1 mutant attenuates constitutive ethylene signaling of this mutant, suggesting that CsCTR1 indeed performs its function as negative regulator of the ethylene signaling pathway. CsCTR1 is constitutively expressed in all of the examined cucumber organs, including roots, stems, leaves, shoot apices, mature male and female flowers, as well as young fruits. CsCTR1 expression gradually declined during male flower development and increased during female flower development. Additionally, our results indicate that CsCTR1 can be induced in the roots, leaves and shoot apices by external ethylene. In conclusion, this study provides a basis for further studies on the role of CTR1 in the biological processes of cucumber and on the molecular mechanism of the cucumber ethylene signaling pathway.

  3. Effects of cucumber mosaic virus infection on electron transport and antioxidant system in chloroplasts and mitochondria of cucumber and tomato leaves.

    Science.gov (United States)

    Song, Xing-Shun; Wang, Yan-Jie; Mao, Wei-Hua; Shi, Kai; Zhou, Yan-Hong; Nogués, Salvador; Yu, Jing-Quan

    2009-03-01

    We examined the responses of the photosynthetic and respiratory electron transport and antioxidant systems in cell organelles of cucumber (Cucumis sativus L.) and tomato (Lycopersicon esculentum Mill.) leaves to infection of cucumber mosaic virus (CMV) by comparing the gas exchange, Chl fluorescence, respiratory electron transport, superoxide dismutase (SOD, EC 1.15.1.1) and ascorbate-glutathione (AsA-GSH) cycle enzymes and the production of H(2)O(2) in chloroplasts, mitochondria and soluble fraction in virus-infected and non-infected leaves. Long-term CMV infection resulted in decreased photosynthesis and respiration rates. Photosynthetic electron flux to carbon reduction, respiratory electron transport via both complex I and complex II and also the Cyt respiration rate all significantly decreased, while photosynthetic alternative electron flux and alternative respiration significantly increased. These changes in electron transport were accompanied by a general increase in the activities of SOD/AsA-GSH cycle enzymes followed by an increased H(2)O(2) accumulation in chloroplasts and mitochondria. These results demonstrated that disturbance of photosynthetic and respiratory electron transport by CMV also affected the antioxidative systems, thereby leading to oxidative stress in various organelles.

  4. QTL mapping of flowering time and fruit shape in Xishuangbana cucumber WI767 (Cucumis sativus L. var. xishuangbannanesis Qi et Yuan)

    Science.gov (United States)

    The Xishuangbanna cucumber (XIS) is a semi-wild landrace growing in the tropical southwest China, which has some unique traits that are useful for cucumber breeding. One such accession is WI7167 that exhibits dark green leaves, short hypocotyl, round fruit shape, orange flesh color in mature fruits,...

  5. Biological control of Pythium aphanidermatum in cucumber with a combined application of Lysobacter enzymogenes strain 3.1T8 and chitosan

    NARCIS (Netherlands)

    Postma, J.; Stevens, L.H.; Wiegers, G.L.; Davelaar, E.; Nijhuis, E.H.

    2009-01-01

    Pythium aphanidermatum (Edson) Fitzp., causing root and crown rot in cucumber, was successfully managed by Lysobacter enzymogenes strain 3.1T8. Greenhouse experiments were performed with cucumber plants grown in rockwool blocks up to 5 weeks with a recirculated nutrient solution. Application of L. e

  6. Reassessment of the succession of lactic acid bacteria in commercial cucumber fermentations and physiological and genomic features associated with their dominance

    Science.gov (United States)

    Current cucumber pickling practices differ significantly from those in the 1940s, when most of the microbiological studies of cucumber fermentations were completed, using culture dependent and biochemical testing. It is the objective of this study to conduct a compositional re-assessment of the micr...

  7. Round fruit shape in WI7239 cucumber is controlled by two interacting quantitative trait loci with one putatively encoding a tomato SUN homolog

    Science.gov (United States)

    Fruit size and shape is an important quality trait in cucumber breeding, yet its genetic basis remains poorly understood. In the present study, we conducted QTL mapping on round fruit shape in cucumber with F2 and F2:3 segregating populations from the cross between WI7238 (long fruit) and WI7239 (ro...

  8. Preservation of acidified cucumbers with a natural preservative combination of fumaric acid and allyl isothiocyanate that target lactic acid bacteria and yeasts

    Science.gov (United States)

    Without the addition of preservative compounds cucumbers acidified with 150 mM acetic acid with pH adjusted to 3.5 typically undergo fermentation by lactic acid bacteria. Fumaric acid (20 mM) inhibited growth of Lactobacillus plantarum and the lactic acid bacteria present on fresh cucumbers, but sp...

  9. Laterally loaded masonry

    DEFF Research Database (Denmark)

    Raun Gottfredsen, F.

    In this thesis results from experiments on mortar joints and masonry as well as methods of calculation of strength and deformation of laterally loaded masonry are presented. The strength and deformation capacity of mortar joints have been determined from experiments involving a constant compressive...... stress and increasing shear. The results show a transition to pure friction as the cohesion is gradually destroyed. An interface model of a mortar joint that can take into account this aspect has been developed. Laterally loaded masonry panels have also been tested and it is found to be characteristic...

  10. Genetic Analysis and QTL Mapping of Fruit Peduncle Length in Cucumber (Cucumis sativus L.)

    Science.gov (United States)

    Zhang, Song; Wang, Ye; Zhang, Sheng-Ping; Gu, Xing-Fang

    2016-01-01

    Mechanized harvesting of cucumbers offers significant advantages compared to manual labor as both shortages and costs of labor increase. However the efficient use of machines depends on breeding plants with longer peduncles, but the genetic and molecular basis of fruit peduncle development in cucumber is not well understood. In this study, F2 populations were developed from a cross between two inbred lines, 1101 with a long peduncle and 1694 with a short peduncle. These were grown at two field sites, Hainan, with a tropical marine climate, in December 2014, and Beijing, with a warm temperate climate, in May 2015. Electron microscope examination of the pith cells in the peduncles of the two parental lines showed that line 1101 had significantly greater numbers of smaller cells compared to line 1694. The inheritance of cucumber fruit peduncle length (FPL) was investigated by the mixed major gene and polygene inheritance model. Genetic analysis indicated that FPL in cucumber is quantitatively inherited and controlled by one additive major gene and additive-dominant polygenes (D-2 model). A total of 1460 pairs of SSR (simple sequence repeat) primers were analyzed to identify quantitative trait loci (QTLs). Two similar genetic maps with 78 SSR markers which covered 720.6 cM in seven linkage groups were constructed based on two F2 populations. QTL analysis from the data collected at the two field sites showed that there are two minor QTLs on chromosome 1, named qfpl1.1 and qfpl1.2, and one major QTL on chromosome 6, named qfpl6.1. The marker UW021226, which was the closest one to qfpl6.1, had an accuracy rate of 79.0% when tested against plants selected from populations of the two parents. The results from this study provide insights into the inheritance and molecular mechanism of the variation of FPL in cucumber, and further research will be carried out to fine map qfpl6.1 to develop more accurate markers for MAS breeding. PMID:27936210

  11. Lateral Thinking of Prospective Teachers

    Science.gov (United States)

    Lawrence, A. S. Arul; Xavier, S. Amaladoss

    2013-01-01

    Edward de Bono who invented the term "lateral thinking" in 1967 is the pioneer of lateral thinking. Lateral thinking is concerned with the generation of new ideas. Liberation from old ideas and the stimulation of new ones are twin aspects of lateral thinking. Lateral thinking is a creative skills from which all people can benefit…

  12. Fine genetic mapping of cp: a recessive gene for compact (dwarf) plant architecture in cucumber, Cucumis sativus L.

    Science.gov (United States)

    Li, Yuhong; Yang, Luming; Pathak, Mamta; Li, Dawei; He, Xiaoming; Weng, Yiqun

    2011-10-01

    The compact (dwarf) plant architecture is an important trait in cucumber (Cucumis sativus L.) breeding that has the potential to be used in once-over mechanical harvest of cucumber production. Compact growth habit is controlled by a simply inherited recessive gene cp. With 150 F(2:3) families derived from two inbred cucumber lines, PI 308915 (compact vining) and PI 249561 (regular vining), we conducted genome-wide molecular mapping with microsatellite (simple sequence repeat, SSR) markers. A framework genetic map was constructed consisting of 187 SSR loci in seven linkage groups (chromosomes) covering 527.5 cM. Linkage analysis placed cp at the distal half of the long arm of cucumber Chromosome 4. Molecular markers cosegregating with the cp locus were identified through whole genome scaffold-based chromosome walking. Fine genetic mapping with 1,269 F(2) plants delimited the cp locus to a 220 kb genomic DNA region. Annotation and function prediction of genes in this region identified a homolog of the cytokinin oxidase (CKX) gene, which may be a potential candidate of compact gene. Alignment of the CKX gene homologs from both parental lines revealed a 3-bp deletion in the first exon of PI 308915, which can serve as a marker for marker-assisted selection of the compact phenotype. This work also provides a solid foundation for map-based cloning of the compact gene and understanding the molecular mechanisms of the dwarfing in cucumber.

  13. Transcriptome profiling reveals roles of meristem regulators and polarity genes during fruit trichome development in cucumber (Cucumis sativus L.).

    Science.gov (United States)

    Chen, Chunhua; Liu, Meiling; Jiang, Li; Liu, Xiaofeng; Zhao, Jianyu; Yan, Shuangshuang; Yang, Sen; Ren, Huazhong; Liu, Renyi; Zhang, Xiaolan

    2014-09-01

    Trichomes are epidermal hair-like structures that function in plant defence against biotic and abiotic stresses. Extensive studies have been performed on foliar trichomes development in Arabidopsis and tomato, but the molecular mechanism of fruit trichome formation remains elusive. Cucumber fruit is covered with trichomes (spines) that directly affect the appearance and quality of cucumber products. Here, we characterized the fruit spine development in wild-type (WT) cucumber and a spontaneous mutant, tiny branched hair (tbh). Our data showed that the cucumber trichome was multicellular and non-glandular, with malformed organelles and no endoreduplication. Fruit spine development was generally homogenous and marked by a rapid base expansion stage. Trichomes in the tbh mutant were tiny and branched, with increased density and aberrant cell shape. Transcriptome profiling indicated that meristem-related genes were highly enriched in the upregulated genes in the tbh versus the WT, as well as in WT spines after versus before base expansion, and that polarity regulators were greatly induced during spine base expansion. Quantitative reverse transcription PCR and in situ hybridization confirmed the differential expression of CUP-SHAPED COTYLEDON3 (CUC3) and SHOOT MERISTEMLESS (STM) during spine development. Therefore, cucumber trichomes are morphologically different from those of Arabidopsis and tomato, and their development may be regulated by a distinct pathway involving meristem genes and polarity regulators.

  14. Silencing of the gibberellin receptor homolog, CsGID1a, affects locule formation in cucumber (Cucumis sativus) fruit.

    Science.gov (United States)

    Liu, Bin; Liu, Xingwang; Yang, Sen; Chen, Chunhua; Xue, Shudan; Cai, Yanling; Wang, Dandan; Yin, Shuai; Gai, Xinshuang; Ren, Huazhong

    2016-04-01

    Gibberellins are phytohormones with many roles, including the regulation of fruit development. However, little is known about the relationship between GA perception and fleshy fruit ontogeny, and particularly locule formation. We characterized the expression of cucumber (Cucumis sativus) GA receptor gene (CsGID1a) using quantitative real-time PCR, in situ hybridization and a promoter::β-glucuronidase (GUS) assay. CsGID1a-RNAi cucumber fruits were observed by dissecting microscope, scanning electron microscopy and transmission electron microscopy. Finally, genome-wide gene expression in young fruits from a control and the RNAi line was compared using a digital gene expression (DGE) analysis approach. The expression pattern of CsGID1a was found to be closely correlated with fruit locule formation, and silencing CsGID1a in cucumber resulted in fruits with abnormal carpels and locules. Overexpression of CsGID1a in the Arabidopsis thaliana double mutant (gid1a gid1c) resulted in 'cucumber locule-like' fruits. The DGE analysis suggested that expression of genes related to auxin synthesis and transport, as well as the cell cycle, was altered in CsGID1a-RNAi fruits, a result that was supported by comparing the auxin content and cellular structures of the control and transgenic fruits. This study demonstrates a previously uncharacterized GA signaling pathway that is essential for cucumber fruit locule formation.

  15. Responses of soil microbial communities in the rhizosphere of cucumber (Cucumis sativus L.) to exogenously applied p-hydroxybenzoic acid.

    Science.gov (United States)

    Zhou, Xingang; Yu, Gaobo; Wu, Fengzhi

    2012-08-01

    Changes in soil biological properties have been implicated as one of the causes of soil sickness, a phenomenon that occurs in continuous monocropping systems. However, the causes for these changes are not yet clear. The aim of this work was to elucidate the role of p-hydroxybenzoic acid (PHBA), an autotoxin of cucumber (Cucumis sativus L.), in changing soil microbial communities. p-Hydroxybenzoic acid was applied to soil every other day for 10 days in cucumber pot assays. Then, the structures and sizes of bacterial and fungal communities, dehydrogenase activity, and microbial carbon biomass (MCB) were assessed in the rhizosphere soil. Structures and sizes of rhizosphere bacterial and fungal communities were analyzed by polymerase chain reaction (PCR)-denaturing gradient gel electrophoresis (DGGE) and real-time PCR, respectively. p-Hydroxybenzoic acid inhibited cucumber seedling growth and stimulated rhizosphere dehydrogenase activity, MBC content, and bacterial and fungal community sizes. Rhizosphere bacterial and fungal communities responded differently to exogenously applied PHBA. The PHBA decreased the Shannon-Wiener index for the rhizosphere bacterial community but increased that for the rhizosphere fungal community. In addition, the response of the rhizosphere fungal community structure to PHBA acid was concentration dependent, but was not for the rhizosphere bacterial community structure. Our results indicate that PHBA plays a significant role in the chemical interactions between cucumber and soil microorganisms and could account for the changes in soil microbial communities in the continuously monocropped cucumber system.

  16. Genome-Wide Mapping of Structural Variations Reveals a Copy Number Variant That Determines Reproductive Morphology in Cucumber.

    Science.gov (United States)

    Zhang, Zhonghua; Mao, Linyong; Chen, Huiming; Bu, Fengjiao; Li, Guangcun; Sun, Jinjing; Li, Shuai; Sun, Honghe; Jiao, Chen; Blakely, Rachel; Pan, Junsong; Cai, Run; Luo, Ruibang; Van de Peer, Yves; Jacobsen, Evert; Fei, Zhangjun; Huang, Sanwen

    2015-06-01

    Structural variations (SVs) represent a major source of genetic diversity. However, the functional impact and formation mechanisms of SVs in plant genomes remain largely unexplored. Here, we report a nucleotide-resolution SV map of cucumber (Cucumis sativas) that comprises 26,788 SVs based on deep resequencing of 115 diverse accessions. The largest proportion of cucumber SVs was formed through nonhomologous end-joining rearrangements, and the occurrence of SVs is closely associated with regions of high nucleotide diversity. These SVs affect the coding regions of 1676 genes, some of which are associated with cucumber domestication. Based on the map, we discovered a copy number variation (CNV) involving four genes that defines the Female (F) locus and gives rise to gynoecious cucumber plants, which bear only female flowers and set fruit at almost every node. The CNV arose from a recent 30.2-kb duplication at a meiotically unstable region, likely via microhomology-mediated break-induced replication. The SV set provides a snapshot of structural variations in plants and will serve as an important resource for exploring genes underlying key traits and for facilitating practical breeding in cucumber.

  17. Onset dominance in lateralization.

    Science.gov (United States)

    Freyman, R L; Zurek, P M; Balakrishnan, U; Chiang, Y C

    1997-03-01

    Saberi and Perrott [Acustica 81, 272-275 (1995)] found that the in-head lateralization of a relatively long-duration pulse train could be controlled by the interaural delay of the single pulse pair that occurs at onset. The present study examined this further, using an acoustic pointer measure of lateralization, with stimulus manipulations designed to determine conditions under which lateralization was consistent with the interaural onset delay. The present stimuli were wideband pulse trains, noise-burst trains, and inharmonic complexes, 250 ms in duration, chosen for the ease with which interaural delays and correlations of select temporal segments of the stimulus could be manipulated. The stimulus factors studied were the periodicity of the ongoing part of the signal as well as the multiplicity and ambiguity of interaural delays. The results, in general, showed that the interaural onset delay controlled lateralization when the steady state binaural cues were relatively weak, either because the spectral components were only sparsely distributed across frequency or because the interaural time delays were ambiguous. Onset dominance can be disrupted by sudden stimulus changes within the train, and several examples of such changes are described. Individual subjects showed strong left-right asymmetries in onset effectiveness. The results have implications for understanding how onset and ongoing interaural delay cues contribute to the location estimates formed by the binaural auditory system.

  18. Laterality and reproductive indices.

    Science.gov (United States)

    Kalichman, Leonid; Kobyliansky, Eugene

    2008-01-01

    Several previous studies support the association between manual dominance and age at menarche or age at menopause. The aim of the present study was to estimate the association between indices of laterality and reproductive indices. The studied sample comprised 650 Chuvashian women aged 18 to 80 years (mean, 46.9; SD = 16.2). The independent-sample t test was used to compare the age at menarche or age at menopause between individuals with right or left dominance of handedness, dominant eye, hand clasping, and arm folding. No significant differences in age at menarche or age at menopause between women with right and left dominance in any of the studied laterality indices were found. This is the first study that simultaneously evaluates the association between dominance in four laterality indices (handedness, dominant eye, hand clasping, and arm folding) and two reproductive indices (age at menarche and age at menopause). Result of our study do not support the hypothesis of a possible association between handedness (and other indices of laterality) and an early age at menarche or age at natural menopause.

  19. The tumor suppressor ARF regulates innate immune responses in mice.

    Science.gov (United States)

    Través, Paqui G; López-Fontal, Raquel; Luque, Alfonso; Hortelano, Sonsoles

    2011-12-15

    The innate immune system is the first line of defense against invading organisms, and TLRs are the main sensors of microbial components, initiating signaling pathways that induce the production of proinflammatory cytokines and type I IFNs. An antiviral action for the tumor suppressor alternative reading frame (ARF) has been reported; however, the precise role of ARF in innate immunity is unknown. In this study, we show that ARF plays an important role in regulation of inflammatory responses. In peritoneal macrophages and bone marrow-derived macrophages from ARF-deficient animals, the induction of proinflammatory cytokines and chemokines by TLR ligands was severely impaired. The altered responses of ARF(-/-) cells to TLR ligands result from aberrant activation of intracellular signaling molecules including MAPKs, IκBα degradation, and NF-κB activation. Additionally, animals lacking ARF were resistant to LPS-induced endotoxic shock. This impaired activation of inflammation in ARF(-/-) mice was not restricted to TLRs, as it was also shown in response to non-TLR signaling pathways. Thus, ARF(-/-) mice were also unable to trigger a proper inflammatory response in experimental peritonitis or in 12-O-tetradecanoylphorbol-13-acetate-induced edema. Overexpression of ARF, but not its downstream target p53, rescued the ARF-deficient phenotype, increasing TLR4 levels and restoring inflammatory reaction. An increase in the E2F1 protein levels observed in ARF(-/-) macrophages at basal condition and after LPS stimulation may be involved in the impaired response in this system, as E2F1 has been described as an inflammatory suppressor. These results indicate that tumor suppressor ARF is a new regulator of inflammatory cell signaling.

  20. Isolation of tumor suppressor genes from MEN-1 related neoplasms

    Energy Technology Data Exchange (ETDEWEB)

    Yavari, R.; Kinder, B.; Bale, A.E. [Yale Univ. School of Medicine, New Haven, CT (United States)

    1994-09-01

    Multiple Endocrine Neoplasia type 1 (MEN 1) is a cancer predisposition syndrome marked by the development of tumors in specific endocrine tissues such as the pituitary, parathyroid and pancreatic islets. Genetic linkage studies have mapped the MEN 1 gene to 11q13, and allelic loss in related tumors suggests that the gene is a tumor suppressor. Because inactivation of tumor suppressors may be accompanied by underexpression, subtractive hybridization was used to isolate potential candidate genes underexpressed in MEN 1 tumors. cDNA was synthesized from tumor and normal parathyroid tissue by RT-PCR. Biotinylated tumor cDNA was used as a driver and normal cDNA as a tester in subtractive hybridization. Following annealing of the driver and tester amplicons, the biotinylated strands were removed with streptavidin. The subtracted material was then used as a probe to isolate clones from a normal pancreatic islet library. Screening 2 x 10{sup 5} plaques yielded 14 positive clones. Of 6 clones analyzed, 3 were confirmed to be underexpressed in parathyroid tumors. Sequence analysis identified 2 clones as human ribosomal protein S10 (RPS10, chromosome 6) and 1 as the islet amyloid polypeptide (1AP, chromosome 12). The precise function of human RPS10 is not known but the related RPS6 functions as a tumor suppressor in Drosophila. 1AP has been implicated in modulation of G protein activity. The remaining positive clones will be mapped to determine if any fall on chromosome 11q13, and additional subtractions with parathyroid and pancreatic islet neoplasms are underway.

  1. The ING tumor suppressors in cellular senescence and chromatin.

    Science.gov (United States)

    Ludwig, Susann; Klitzsch, Alexandra; Baniahmad, Aria

    2011-07-18

    The Inhibitor of Growth (ING) proteins represent a type II tumor suppressor family comprising five conserved genes, ING1 to ING5. While ING1, ING2 and ING3 proteins are stable components of the mSIN3a-HDAC complexes, the association of ING1, ING4 and ING5 with HAT protein complexes was also reported. Among these the ING1 and ING2 have been analyzed more deeply. Similar to other tumor suppressor factors the ING proteins are also involved in many cellular pathways linked to cancer and cell proliferation such as cell cycle regulation, cellular senescence, DNA repair, apoptosis, inhibition of angiogenesis and modulation of chromatin.A common structural feature of ING factors is the conserved plant homeodomain (PHD), which can bind directly to the histone mark trimethylated lysine of histone H3 (H3K4me3). PHD mutants lose the ability to undergo cellular senescence linking chromatin mark recognition with cellular senescence. ING1 and ING2 are localized in the cell nucleus and associated with chromatin modifying enzymes, linking tumor suppression directly to chromatin regulation. In line with this, the expression of ING1 in tumors is aberrant or identified point mutations are mostly localized in the PHD finger and affect histone binding. Interestingly, ING1 protein levels increase in replicative senescent cells, latter representing an efficient pathway to inhibit cancer proliferation. In association with this, suppression of p33ING1 expression prolongs replicative life span and is also sufficient to bypass oncogene-induced senescence. Recent analyses of ING1- and ING2-deficient mice confirm a tumor suppressive role of ING1 and ING2 and also indicate an essential role of ING2 in meiosis.Here we summarize the activity of ING1 and ING2 as tumor suppressors, chromatin factors and in development.

  2. Determination of Benzoate Level in Canned Pickles and Pickled Cucumbers in Food Producing Factories in Markazi Province and those that their Products were Sold in Arak City, Iran

    Directory of Open Access Journals (Sweden)

    Mostafa Delavar

    2012-11-01

    Full Text Available Background: Anecdotal information has suggested that sodium benzoate is used with more than permissible doses during production steps of food products especially pickles and pickled cucumbers in food producing factories in Markazi province and other food producing factories . The present study was done to evaluate factual concentration of sodium benzoate in these products. Methods: In this study, 8 samples from canned pickled cucumbers and 10 samples from canned pickles were randomly gathered from food production factories in Markazi province between March and September 2010. Also, 25 samples from canned pickled cucumbers and 15 samples from canned pickles and 7 samples of bulk cargo pickled cucumbers were collected from the other provinces in Arak city. Sodium benzoate level was determined in the samples using UV-VIS spectrophotometry method. The determined values were analyzed by N-par test using SPSS software version 16.0. Results: Sodium benzoate level was near zero in the samples of canned pickles and pickled cucumbers from producing factories. This was 200-400 PPM in 7 samples from bulk cargo pickled cucumbers which was higher than permissible dose. There was not a statistically significant difference between mean benzoate level of canned pickles and pickled cucumbers produced in Markazi providence factories and other food factories. Benzoate level was significantly higher than permissible dose in bulk cargo pickled cucumbers. Conclusion: Food products from production factories do not have higher than permissible level of sodium benzoate; however, this is higher in bulk cargo pickled cucumbers. Hence, stricter control on bulk cargo pickled cucumber products is recommended.

  3. Tumor-Induced Myeloid-Derived Suppressor Cells.

    Science.gov (United States)

    De Sanctis, Francesco; Bronte, Vincenzo; Ugel, Stefano

    2016-06-01

    Myeloid-derived suppressor cells (MDSCs) represent a heterogeneous, immune-suppressive leukocyte population that develops systemically and infiltrates tumors. MDSCs can restrain the immune response through different mechanisms including essential metabolite consumption, reactive oxygen and nitrogen species production, as well as display of inhibitory surface molecules that alter T-cell trafficking and viability. Moreover, MDSCs play a role in tumor progression, acting directly on tumor cells and promoting cancer stemness, angiogenesis, stroma deposition, epithelial-to-mesenchymal transition, and metastasis formation. Many biological and pharmaceutical drugs affect MDSC expansion and functions in preclinical tumor models and patients, often reversing host immune dysfunctions and allowing a more effective tumor immunotherapy.

  4. Therapeutic targeting of myeloid-derived suppressor cells.

    Science.gov (United States)

    Ugel, Stefano; Delpozzo, Federica; Desantis, Giacomo; Papalini, Francesca; Simonato, Francesca; Sonda, Nada; Zilio, Serena; Bronte, Vincenzo

    2009-08-01

    Myeloid-derived suppressor cells (MDSCs) represent a subset of myeloid cells that expand under pathological conditions, such as cancer development, acute and chronic infections, trauma, bone marrow transplantations, and some autoimmune diseases. MDSCs mediate a negative regulation of the immune response by affecting different T lymphocyte subsets. Potential mechanisms, which underlie this inhibitory activity range from those requiring direct cell-to-cell contact with others, more indirect, and mediated by the modification of the microenvironment. Pharmacological inhibition of MDSC suppressive pathways is a promising strategy to overcome disease-induced immune defects, which might be a key step in enhancing the effectiveness of immune-based therapies.

  5. Tumor suppressor p53 meets microRNAs

    OpenAIRE

    2011-01-01

    Tumor suppressor p53 plays a central role in tumor prevention. As a transcription factor, p53 mainly exerts its function through transcription regulation of its target genes to initiate various cellular responses. To maintain its proper function, p53 is tightly regulated by a wide variety of regulators in cells. Thus, p53, its regulators and regulated genes form a complex p53 network which is composed of hundreds of genes and their products. microRNAs (miRNAs) are a class of endogenously expr...

  6. SIRT1, Is It a Tumor Promoter or Tumor Suppressor?

    Directory of Open Access Journals (Sweden)

    Chu-Xia Deng

    2009-01-01

    Full Text Available SIRT1 has been considered as a tumor promoter because of its increased expression in some types of cancers and its role in inactivating proteins that are involved in tumor suppression and DNA damage repair. However, recent studies demonstrated that SIRT1 levels are reduced in some other types of cancers, and that SIRT1 deficiency results in genetic instability and tumorigenesis, while overexpression of SIRT1 attenuates cancer formation in mice heterozygous for tumor suppressor p53 or APC. Here, I review these recent findings and discuss the possibility that activation of SIRT1 both extends lifespan and inhibits cancer formation.

  7. Competition for in Vitro [3H]Gibberellin A4 Binding in Cucumber by Gibberellins and Their Derivatives 1

    Science.gov (United States)

    Yalpani, Nasser; Srivastava, Lalit M.

    1985-01-01

    The gibberellin (GA) binding properties of a cytosol fraction from hypocotyls of cucumber (Cucumis sativus L. cv National Pickling) were examined using a DEAE filter paper assay, [3H]GA4, and over 20 GAs, GA derivatives and other growth regulators. The results demonstrate structural specificity of the binding protein for γ-lactonic C-19 GAs with a 3 β-hydroxyl and a C-6 carboxyl group. Additional hydroxylations of the A, C, or D ring of the ent-gibberellane skeleton and methylation of the C-6 carboxyl impede or abolish binding affinity. Bioassay data are generally supported by the in vitro results but significantly GA9 and GA36, both considered to be precursors of GA4 in cucumber, show no affinity for the binding protein. The results are discussed in relation to the active site of the putative GA4 receptor in cucumber. PMID:16664553

  8. Competition for in vitro [h]gibberellin a(4) binding in cucumber by gibberellins and their derivatives.

    Science.gov (United States)

    Yalpani, N; Srivastava, L M

    1985-12-01

    The gibberellin (GA) binding properties of a cytosol fraction from hypocotyls of cucumber (Cucumis sativus L. cv National Pickling) were examined using a DEAE filter paper assay, [(3)H]GA(4), and over 20 GAs, GA derivatives and other growth regulators. The results demonstrate structural specificity of the binding protein for gamma-lactonic C-19 GAs with a 3 beta-hydroxyl and a C-6 carboxyl group. Additional hydroxylations of the A, C, or D ring of the ent-gibberellane skeleton and methylation of the C-6 carboxyl impede or abolish binding affinity. Bioassay data are generally supported by the in vitro results but significantly GA(9) and GA(36), both considered to be precursors of GA(4) in cucumber, show no affinity for the binding protein. The results are discussed in relation to the active site of the putative GA(4) receptor in cucumber.

  9. Postharvest chitosan-g-salicylic acid application alleviates chilling injury and preserves cucumber fruit quality during cold storage.

    Science.gov (United States)

    Zhang, Youzuo; Zhang, Meiling; Yang, Huqing

    2015-05-01

    The effect of salicylic acid with and without chitosan, or a chitosan-g-salicylic acid complex, on chilling injury and post-harvest quality of cucumber stored at 2 °C for 12 days plus 2 days at 20 °C was investigated. The results showed the chitosan-g-salicylic acid coating inhibited chilling injury better than salicylic acid alone or with chitosan. Chitosan-g-salicylic acid also reduced weight loss and respiration rate, limited increases in malondialdehyde content and electrolyte leakage, and maintained higher total soluble solids, chlorophyll and ascorbic acid content. Furthermore, this coating increased the endogenous salicylic acid concentrations and antioxidant enzyme activities including superoxide dismutase, catalase, ascorbate peroxidase and glutathione reductase in cucumber during storage. Our study suggests that chitosan-g-salicylic acid alleviated chilling injury in cucumber through sustained-release of salicylic acid and the higher antioxidant enzymes concentrations.

  10. Combined Effects of Excess Mn and Low pH on Oxidative Stress and Antioxidant Enzymes in Cucumber Roots

    Institute of Scientific and Technical Information of China (English)

    SHI Qing-hua; ZHU Zhu-jun; LI Juan; QIAN Qiong-qiu

    2006-01-01

    The effects of excess Mn on oxidative stress and antioxidant enzymes in cucumber roots under different pH (pH 4.5 and 6.5) were studied. The results indicated that lipid peroxidation was increasingly serious with the increased concentration of Mn, especially under low pH. As a result, the growth of cucumber roots and shoots was significantly inhibited. CAT was sensitive to excess Mn, and its activity significantly decreased under excess Mn and low pH, while activities of GPX, APX, DHAR and GR increased under low pH and to some extent under excess Mn, which indicated their important roles in scavenging reactive oxygen in tolerance to low pH and excess Mn of cucumber roots.

  11. SCAR, a WASP-related Protein, Isolated as a Suppressor of Receptor Defects in Late Dictyostelium Development

    Science.gov (United States)

    Bear, James E.; Rawls, John F.; Saxe, Charles L.

    1998-01-01

    G protein–coupled receptors trigger the reorganization of the actin cytoskeleton in many cell types, but the steps in this signal transduction cascade are poorly understood. During Dictyostelium development, extracellular cAMP functions as a chemoattractant and morphogenetic signal that is transduced via a family of G protein–coupled receptors, the cARs. In a strain where the cAR2 receptor gene is disrupted by homologous recombination, the developmental program arrests before tip formation. In a genetic screen for suppressors of this phenotype, a gene encoding a protein related to the Wiskott-Aldrich Syndrome protein was discovered. Loss of this protein, which we call SCAR (suppressor of cAR), restores tip formation and most later development to cAR2− strains, and causes a multiple-tip phenotype in a cAR2+ strain as well as leading to the production of extremely small cells in suspension culture. SCAR−cells have reduced levels of F-actin staining during vegetative growth, and abnormal cell morphology and actin distribution during chemotaxis. Uncharacterized homologues of SCAR have also been identified in humans, mouse, Caenorhabditis elegans, and Drosophila. These data suggest that SCAR may be a conserved negative regulator of G protein-coupled signaling, and that it plays an important role in regulating the actin cytoskeleton. PMID:9732292

  12. Lateral Attitude Change.

    Science.gov (United States)

    Glaser, Tina; Dickel, Nina; Liersch, Benjamin; Rees, Jonas; Süssenbach, Philipp; Bohner, Gerd

    2015-08-01

    The authors propose a framework distinguishing two types of lateral attitude change (LAC): (a) generalization effects, where attitude change toward a focal object transfers to related objects, and (b) displacement effects, where only related attitudes change but the focal attitude does not change. They bring together examples of LAC from various domains of research, outline the conditions and underlying processes of each type of LAC, and develop a theoretical framework that enables researchers to study LAC more systematically in the future. Compared with established theories of attitude change, the LAC framework focuses on lateral instead of focal attitude change and encompasses both generalization and displacement. Novel predictions and designs for studying LAC are presented.

  13. Treatment of lateral epicondylitis.

    Science.gov (United States)

    Johnson, Greg W; Cadwallader, Kara; Scheffel, Scot B; Epperly, Ted D

    2007-09-15

    Lateral epicondylitis is a common overuse syndrome of the extensor tendons of the forearm. It is sometimes called tennis elbow, although it can occur with many activities. The condition affects men and women equally and is more common in persons 40 years or older. Despite the prevalence of lateral epicondylitis and the numerous treatment strategies available, relatively few high-quality clinical trials support many of these treatment options; watchful waiting is a reasonable option. Topical nonsteroidal anti-inflammatory drugs, corticosteroid injections, ultrasonography, and iontophoresis with nonsteroidal anti-inflammatory drugs appear to provide short-term benefits. Use of an inelastic, nonarticular, proximal forearm strap (tennis elbow brace) may improve function during daily activities. Progressive resistance exercises may confer modest intermediate-term results. Evidence is mixed on oral nonsteroidal antiinflammatory drugs, mobilization, and acupuncture. Patients with refractory symptoms may benefit from surgical intervention. Extracorporeal shock wave therapy, laser treatment, and electromagnetic field therapy do not appear to be effective.

  14. [Lateral lumbar disk herniation].

    Science.gov (United States)

    Deburge, A; Barre, E; Guigui, P

    A retrospective study of 41 lateral discal hernias observed between 1984 and 1991 were studied among the 1080 discal hernias treated during this period. CT scan, performed in all cases, distinguished several different types of hernia: foramen hernias (26), extraforamen hernias (12), mixed forms (5) associated with canal component (11). Thirteen disco scans were required. Nucleolysis was performed in 24 patients (58%) and surgical treatment was the first intention choice in 17 (41%). Outcome, evaluated with a function score developed in the unit were good in the 17 surgery cases (100%). In the nucleolysis patients results were good or excellent in 13, average in 4, and poor in 7. Five of the nucleolysis failures were later operated leading to good results in 3, average in 1 and no change in 1. Indications for surgery are more frequent in this type of discal hernia and results in our surgical series were better than those for chemonucleolysis.

  15. The lateral angle revisited

    DEFF Research Database (Denmark)

    Morgan, Jeannie; Lynnerup, Niels; Hoppa, R.D.

    2013-01-01

    measurements taken from computed tomography (CT) scans. Previous reports have observed that the lateral angle size in females is significantly larger than in males. The method was applied to an independent series of 77 postmortem CT scans (42 males, 35 females) to validate its accuracy and reliability...... method appears to be of minimal practical use in forensic anthropology and archeology. © 2013 American Academy of Forensic Sciences....

  16. Ion exchanger BIONA 312 as a component of soils polluted with nickel in cultivation of cucumber (Cucumis sativus L.

    Directory of Open Access Journals (Sweden)

    Renata Matraszek

    2013-12-01

    Full Text Available The objective of the studies undertaken was to assess the possibility of ion exchange substrate BIONA 312 use for nickel bioavailability limitation in cucumber (Cucumis sativus L. 'Hermes'cv. as determined on the ground of chlorophyll and Ni content. BIONA 312, regarding the chemical composition, is a mixture of strongly acid cation exchanger KU-2x8 and polyfunctional weakly alkaline anion exchanger EDE-10P. The experiment was differentiated in regard to nickel and ion exchanger content. The following doses of Ni (in the form of NiSO4 were introduced: 0,30 or 75mg Ni·dm-3 of the substrate. BIONA 312 was added to the medium in the following doses: O,2 or 5% of substrate volume. Together with Ni dose increase in the medium there was recorded a significant increase of this metal concentration in the cucumber biomass. Nickel in the amount 30 mg dm-3 did not affect considerably the changes in any of chlorophyll form, but a dose 75mg Ni·dm-3 has caused a significant decrease in chlorophyll "a" concentration in cucumber leaves. Simultaneously with the increase in the nickel content in the nutritive environment the decrease in the value of organic mass productivity coefficient was observed. The introduction of 5% ion exchange substrate BIONA 312 into the medium containing nickel in the amount 30 or 75 mg·dm-3 induced a significant growth of the studied chlorophyll fractions in the cucumber leaves. BIONA 312 introduced to the environment contaminated with nickel in the amount of 30 or 75 mg·dm-3 has significantly reduced Ni content in the cucumber biomass simultaneously increasing participation of roots in organic mass production. More efficient for the reduction of harmful Ni effect on the cucumber plants turned out to be introduction of ionite sorbent BIONA 312 at the dosage 5% than 2%.

  17. Ultrahigh-density linkage map for cultivated cucumber (Cucumis sativus L. using a single-nucleotide polymorphism genotyping array.

    Directory of Open Access Journals (Sweden)

    Mor Rubinstein

    Full Text Available Genotyping arrays are tools for high-throughput genotyping, which is beneficial in constructing saturated genetic maps and therefore high-resolution mapping of complex traits. Since the report of the first cucumber genome draft, genetic maps have been constructed mainly based on simple-sequence repeats (SSRs or on combinations of SSRs and sequence-related amplified polymorphism (SRAP. In this study, we developed the first cucumber genotyping array consisting of 32,864 single-nucleotide polymorphisms (SNPs. These markers cover the cucumber genome with a median interval of ~2 Kb and have expected genotype calls in parents/F1 hybridizations as a training set. The training set was validated with Fluidigm technology and showed 96% concordance with the genotype calls in the parents/F1 hybridizations. Application of the genotyping array was illustrated by constructing a 598.7 cM genetic map based on a '9930' × 'Gy14' recombinant inbred line (RIL population comprised of 11,156 SNPs. Marker collinearity between the genetic map and reference genomes of the two parents was estimated at R2 = 0.97. We also used the array-derived genetic map to investigate chromosomal rearrangements, regional recombination rate, and specific regions with segregation distortions. Finally, 82% of the linkage-map bins were polymorphic in other cucumber variants, suggesting that the array can be applied for genotyping in other lines. The genotyping array presented here, together with the genotype calls of the parents/F1 hybridizations as a training set, should be a powerful tool in future studies with high-throughput cucumber genotyping. An ultrahigh-density linkage map constructed by this genotyping array on RIL population may be invaluable for assembly improvement, and for mapping important cucumber QTLs.

  18. Lateral Elbow Tendinopathy

    Science.gov (United States)

    Bhabra, Gev; Wang, Allan; Ebert, Jay R.; Edwards, Peter; Zheng, Monica; Zheng, Ming H.

    2016-01-01

    Lateral elbow tendinopathy, commonly known as tennis elbow, is a condition that can cause significant functional impairment in working-age patients. The term tendinopathy is used to describe chronic overuse tendon disorders encompassing a group of pathologies, a spectrum of disease. This review details the pathophysiology of tendinopathy and tendon healing as an introduction for a system grading the severity of tendinopathy, with each of the 4 grades displaying distinct histopathological features. Currently, there are a large number of nonoperative treatments available for lateral elbow tendinopathy, with little guidance as to when and how to use them. In fact, an appraisal of the clinical trials, systematic reviews, and meta-analyses studying these treatment modalities reveals that no single treatment reliably achieves outstanding results. This may be due in part to the majority of clinical studies to date including all patients with chronic tendinopathy rather than attempting to categorize patients according to the severity of disease. We relate the pathophysiology of the different grades of tendinopathy to the basic science principles that underpin the mechanisms of action of the nonoperative treatments available to propose a treatment algorithm guiding the management of lateral elbow tendinopathy depending on severity. We believe that this system will be useful both in clinical practice and for the future investigation of the efficacy of treatments. PMID:27833925

  19. Visualization of plant viral suppressor silencing activity in intact leaf lamina by quantitative fluorescent imaging

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    Francis Kevin P

    2011-08-01

    Full Text Available Abstract Background Transient expression of proteins in plants has become a favoured method over the production of stably transformed plants because, in addition to enabling high protein yields, it is both fast and easy to apply. An enhancement of transient protein expression can be achieved by plant virus-encoded RNA silencing suppressor proteins. Since viral suppressor proteins differ in their efficiency to enhance transient protein expression in plants, we developed a whole-leaf green fluorescent protein (GFP-based imaging assay to quantitatively assess suppressor protein activity. Results In a transient GFP-expression assay using wild-type and GFP-transgenic N. benthamiana, addition of the plant viral suppressors Beet mild yellowing virus (BMYV-IPP P0 or Plum pox virus (PPV HC-Pro was shown to increase fluorescent protein expression 3-4-fold, 7 days post inoculation (dpi when compared to control plants. In contrast, in agroinfiltrated patches without suppressor activity, near complete silencing of the GFP transgene was observed in the transgenic N. benthamiana at 21 dpi. Both co-infiltrated suppressors significantly enhanced GFP expression over time, with HC-Pro co-infiltrations leading to higher short term GFP fluorescence (at 7 dpi and P0 giving higher long term GFP fluorescence (at 21 dpi. Additionally, in contrast to HC-Pro co-infiltrations, an area of complete GFP silencing was observed at the edge of P0 co-infiltrated areas. Conclusions Fluorescence imaging of whole intact leaves proved to be an easy and effective method for spatially and quantitatively observing viral suppressor efficiency in plants. This suppressor assay demonstrates that plant viral suppressors greatly enhanced transient GFP expression, with P0 showing a more prolonged suppressor activity over time than HC-Pro. Both suppressors could prove to be ideal candidates for enhancing target protein expression in plants.

  20. ABCE1 is a highly conserved RNA silencing suppressor.

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    Kairi Kärblane

    Full Text Available ATP-binding cassette sub-family E member 1 (ABCE1 is a highly conserved protein among eukaryotes and archaea. Recent studies have identified ABCE1 as a ribosome-recycling factor important for translation termination in mammalian cells, yeast and also archaea. Here we report another conserved function of ABCE1. We have previously described AtRLI2, the homolog of ABCE1 in the plant Arabidopsis thaliana, as an endogenous suppressor of RNA silencing. In this study we show that this function is conserved: human ABCE1 is able to suppress RNA silencing in Nicotiana benthamiana plants, in mammalian HEK293 cells and in the worm Caenorhabditis elegans. Using co-immunoprecipitation and mass spectrometry, we found a number of potential ABCE1-interacting proteins that might support its function as an endogenous suppressor of RNA interference. The interactor candidates are associated with epigenetic regulation, transcription, RNA processing and mRNA surveillance. In addition, one of the identified proteins is translin, which together with its binding partner TRAX supports RNA interference.