WorldWideScience

Sample records for ct-measured soil pore

  1. Can ash clog soil pores?

    Science.gov (United States)

    Stoof, Cathelijne; Stoof, Cathelijne; Gevaert, Anouk; Gevaert, Anouk; Baver, Christine; Baver, Christine; Hassanpour, Bahareh; Hassanpour, Bahareh; Morales, Veronica; Morales, Veronica; Zhang, Wei; Zhang, Wei; Martin, Deborah; Martin, Deborah; Steenhuis, Tammo; Steenhuis, Tammo

    2015-04-01

    Wildfire can greatly increase a landscape's vulnerability to flooding and erosion events, and ash is thought to play a large role in controlling runoff and erosion processes after wildfire. Although ash can store rainfall and thereby reduce runoff and erosion for a limited period after wildfires, it has also been hypothesized to clog soil pores and reduce infiltration. Several researchers have attributed the commonly observed increase in runoff and erosion after fire to the potential pore-clogging effect of ash. Evidence is however incomplete, as to date, research has solely focused on identifying the presence of ash in the soil, with the actual flow processes associated with the infiltration and pore-clogging of ash remaining a major unknown. In several laboratory experiments, we tested the hypothesis that ash causes pore clogging to the point that infiltration is hampered and ponding occurs. We first visualized and quantified pore-scale infiltration of water and ash in sand of a range of textures and at various infiltration rates, using a digital bright field microscope capturing both photo and video. While these visualization experiments confirm field and lab observation of ash washing into soil pores, we did not observe any clogging of pores, and have not been able to create conditions for which this does occur. Additional electrochemical analysis and measurement of saturated hydraulic conductivity indicate that pore clogging by ash is not plausible. Electrochemical analysis showed that ash and sand are both negatively charged, showing that attachment of ash to sand and any resulting clogging is unlikely. Ash also had quite high saturated conductivity, and systems where ash was mixed in or lying on top of sand had similarly high hydraulic conductivity. Based on these various experiments, we cannot confirm the hypothesis that pore clogging by ash contributes to the frequently observed increase in post-fire runoff, at least for the medium to coarse sands

  2. Active Pore Volume in Danish Peat Soils

    DEFF Research Database (Denmark)

    Forsmann, Ditte M.; Kjærgaard, Charlotte

    2012-01-01

    Phosphorus release within the soil matrix caused by the changed redox conditions due to re-establishment of a riparian wetland can be critical for the aquatic environment. However, phosphorous released in the soil will not always result in an immediate contribution to this loss to the aquatic...... environment. Lowland soils are primarily peat soils, and only a minor part of the total soil volume of peat soils is occupied by macropores (>30 µm). Since water primarily flows in these macropores, the majority of the soil matrix is bypassed (the immobile domain). Phosphorus released in the immobile domain...... is not actively transported out of the system, but is only transported via diffusion, which is a very slow process. Thus it is interesting to investigate the size of the active pore volume in peat soils. The hypothesis of this study is that the active pores volume of a peat soil can be expressed using bulk...

  3. Conservation agriculture effects on soil pore characteristics

    DEFF Research Database (Denmark)

    Munkholm, Lars Juhl; Abdollahi, Lotfollah

    ploughing to a depth of 20 cm (MP), harrowing to a depth of 8-10 cm (H) and direct drilling (D). Minimally disturbed core samples were taken at 4-8, 12-16 and 18-27 cm depths 11 years after experimental start. Water retention characteristics were measured for a range of matric potential ranging from -10......Conservation tillage in combination with crop rotation, residue management and cover crops are key components of conservation agriculture. A positive long-term effect of applying all components of conservation agriculture on soil structural quality is expected. However, there is a lack...... of quantitative knowledge to support this statement. This study examines the long-term effects of crop rotations, residue management and tillage on soil pore characteristics of two sandy loam soils in Denmark. Results are reported from a split plot field experiment rotation as main plot factor and tillage...

  4. Software Image J to study soil pore distribution

    Directory of Open Access Journals (Sweden)

    Sabrina Passoni

    2014-04-01

    Full Text Available In the soil science, a direct method that allows the study of soil pore distribution is the bi-dimensional (2D digital image analysis. Such technique provides quantitative results of soil pore shape, number and size. The use of specific softwares for the treatment and processing of images allows a fast and efficient method to quantify the soil porous system. However, due to the high cost of commercial softwares, public ones can be an interesting alternative for soil structure analysis. The objective of this work was to evaluate the quality of data provided by the Image J software (public domain used to characterize the voids of two soils, characterized as Geric Ferralsol and Rhodic Ferralsol, from the southeast region of Brazil. The pore distribution analysis technique from impregnated soil blocks was utilized for this purpose. The 2D image acquisition was carried out by using a CCD camera coupled to a conventional optical microscope. After acquisition and treatment of images, they were processed and analyzed by the software Noesis Visilog 5.4® (chosen as the reference program and ImageJ. The parameters chosen to characterize the soil voids were: shape, number and pore size distribution. For both soils, the results obtained for the image total porosity (%, the total number of pores and the pore size distribution showed that the Image J is a suitable software to be applied in the characterization of the soil sample voids impregnated with resin.

  5. Pore structure of natural and regenerated soil aggregates

    DEFF Research Database (Denmark)

    Naveed, Muhammad; Arthur, Emmanuel; de Jonge, Lis Wollesen

    2014-01-01

    Quantitative characterization of aggregate pore structure can reveal the evolution of aggregates under different land use and management practices and their effects on soil processes and functions. Advances in X-ray Computed Tomography (CT) provide powerful means to conduct such characterization....... This study examined aggregate pore structure of three differently managed same textured Danish soils (mixed forage cropping, MFC; mixed cash cropping, MCC; cereal cash cropping, CCC) for (i) natural aggregates, and (ii) aggregates regenerated after 20 months of incubation. In total, 27 aggregates (8-16 mm...... pore diameter of 200 and 170 Hm, respectively. Pore shape analysis indicated that CCC and MFC aggregates had an abundance of rounded and elongated pores, respectively, and those of MCC were in-between CCC and MFC. Aggregate pore structure development in the lysimeters was nearly similar irrespective...

  6. Extraction of pores from microtomographic reconstructions of intact soil aggregates

    Energy Technology Data Exchange (ETDEWEB)

    Albee, P. B.; Stockman, G. C.; Smucker, A. J. M.

    2000-02-29

    Segmentation of features is often a necessary step in the analysis of volumetric data. The authors have developed a simple technique for extracting voids from irregular volumetric data sets. In this work they look at extracting pores from soil aggregates. First, they identify a threshold that gives good separability of the object from the background. They then segment the object, and perform connected components analysis on the pores within the object. Using their technique pores that break the surface can be segmented along with pores completely contained in the initially segmented object.

  7. Soil Pore Network Visualisation and Quantification using ImageJ

    DEFF Research Database (Denmark)

    Garbout, Amin; Pajor, Radoslaw; Otten, Wilfred

    Abstract Soil is one of the most complex materials on the earth, within which many biological, physical and chemical processes that support life and affect climate change take place. A much more detailed knowledge of the soil system is required to improve our ability to develop soil management...... strategies to preserve this limited resource. Many of those processes occur at micro scales. For long our ability to study soils non-destructively at microscopic scales has been limited, but recent developments in the use of X-ray Computed Tomography has offered great opportunities to quantify the 3-D...... geometry of soil pores. In this study we look at how networks that summarize the geometry of pores in soil are affected by soil structure. One of the objectives is to develop a robust and reproducible image analysis technique to produce quantitative knowledge on soil architecture from high resolution 3D...

  8. Pore-water chemistry explains zinc phytotoxicity in soil.

    Science.gov (United States)

    Kader, Mohammed; Lamb, Dane T; Correll, Ray; Megharaj, Mallavarapu; Naidu, Ravi

    2015-12-01

    Zinc (Zn) is a widespread soil contaminant arising from a numerous anthropogenic sources. However, adequately predicting toxicity of Zn to ecological receptors remains difficult due to the complexity of soil characteristics. In this study, we examined solid-solution partitioning using pore-water data and toxicity of Zn to cucumber (Cucumis sativus L.) in spiked soils. Pore-water effective concentration (ECx, x=10%, 20% and 50% reduction) values were negatively related to pH, indicating lower Zn pore water concentration were needed to cause phytotoxicity at high pH soils. Total dissolved zinc (Znpw) and free zinc (Zn(2+)) in soil-pore water successfully described 78% and 80.3% of the variation in relative growth (%) in the full dataset. When the complete data set was used (10 soils), the estimated EC50pw was 450 and 79.2 µM for Znpw and Zn(2+), respectively. Total added Zn, soil pore water pH (pHpw) and dissolve organic carbon (DOC) were the best predictors of Znpw and Zn(2+) in pore-water. The EC10 (total loading) values ranged from 179 to 5214 mg/kg, depending on soil type. Only pH measurements in soil were related to ECx total Zn data. The strongest relationship to ECx overall was pHca, although pHw and pHpw were in general related to Zn ECx. Similarly, when a solution-only model was used to predict Zn in shoot, DOC was negatively related to Zn in shoot, indicating a reduction in uptake/ translocation of Zn from solution with increasing DOC. Copyright © 2015 Elsevier Inc. All rights reserved.

  9. Effects of the soil pore network architecture on the soil's physical functionalities

    Science.gov (United States)

    Smet, Sarah; Beckers, Eléonore; Léonard, Angélique; Degré, Aurore

    2017-04-01

    The soil fluid movement's prediction is of major interest within an agricultural or environmental scope because many processes depend ultimately on the soil fluids dynamic. It is common knowledge that the soil microscopic pore network structure governs the inner-soil convective fluids flow. There isn't, however, a general methodthat consider the pore network structure as a variable in the prediction of thecore scale soil's physical functionalities. There are various possible representations of the microscopic pore network: sample scale averaged structural parameters, extrapolation of theoretic pore network, or use of all the information available by modeling within the observed pore network. Different representations implydifferent analyzing methodologies. To our knowledge, few studies have compared the micro-and macroscopic soil's characteristics for the same soil core sample. The objective of our study is to explore the relationship between macroscopic physical properties and microscopic pore network structure. The saturated hydraulic conductivity, the air permeability, the retention curve, and others classical physical parameters were measured for ten soil samples from an agricultural field. The pore network characteristics were quantified through the analyses of X-ray micro-computed tomographic images(micro-CT system Skyscan-1172) with a voxel size of 22 µm3. Some of the first results confirmed what others studies had reported. Then, the comparison between macroscopic properties and microscopic parameters suggested that the air movements depended mostly on the pore connectivity and tortuosity than on the total porosity volume. We have also found that the fractal dimension calculated from the X-ray images and the fractal dimension calculated from the retention curve were significantly different. Our communication will detailthose results and discuss the methodology: would the results be similar with a different voxel size? What are the calculated and measured

  10. Field sampling of soil pore water to evaluate trace element mobility and associated environmental risk

    Energy Technology Data Exchange (ETDEWEB)

    Moreno-Jimenez, Eduardo, E-mail: eduardo.moreno@uam.es [Departamento de Quimica Agricola, Universidad Autonoma de Madrid, 28049 Madrid (Spain); Beesley, Luke [James Hutton Institute, Craigiebuckler, Aberdeen AB15 8QH (United Kingdom); Lepp, Nicholas W. [35, Victoria Road, Formby, Liverpool L37 7DH (United Kingdom); Dickinson, Nicholas M. [Department of Ecology, Lincoln University, Lincoln 7647, PO Box 84 (New Zealand); Hartley, William [School of Computing, Science and Engineering, University of Salford, Cockcroft Building, Salford, M5 4WT (United Kingdom); Clemente, Rafael [Dep. of Soil and Water Conservation and Organic Waste Management, CEBAS-CSIC, Campus Universitario de Espinardo, PO Box 164, 30100 Espinardo, Murcia (Spain)

    2011-10-15

    Monitoring soil pollution is a key aspect in sustainable management of contaminated land but there is often debate over what should be monitored to assess ecological risk. Soil pore water, containing the most labile pollutant fraction in soils, can be easily collected in situ offering a routine way to monitor this risk. We present a compilation of data on concentration of trace elements (As, Cd, Cu, Pb, and Zn) in soil pore water collected in field conditions from a range of polluted and non-polluted soils in Spain and the UK during single and repeated monitoring, and propose a simple eco-toxicity test using this media. Sufficient pore water could be extracted for analysis both under semi-arid and temperate conditions, and eco-toxicity comparisons could be effectively made between polluted and non-polluted soils. We propose that in-situ pore water extraction could enhance the realism of risk assessment at some contaminated sites. - Highlights: > In situ pore water sampling successfully evaluates trace elements mobility in soils. > Field sampling proved robust for different soils, sites and climatic regimes. > Measurements may be directly related to ecotoxicological assays. > Both short and long-term monitoring of polluted lands may be achieved. > This method complements other widely used assays for environmental risk assessment. - In situ pore water sampling from a wide variety of soils proves to be a beneficial application to monitor the stability of pollutants in soils and subsequent risk through mobility.

  11. Pore Pressure Response to Groundwater Fluctuations in Saturated Double-Layered Soil

    Directory of Open Access Journals (Sweden)

    Hongwei Ying

    2015-01-01

    Full Text Available Analytical solutions are developed for one-dimensional consolidation of double-layered saturated soil subjected to groundwater fluctuations. The solutions are derived by an explicit mathematical procedure using Duhamel’s theorem in conjunction with a Fourier series, when groundwater fluctuation is described by a general time-dependent function and assumed to be the pore water pressure variations at the upper boundary. Taking as an example the harmonic groundwater fluctuation, the relevant response of the excess pore water pressure is discussed in detail, and the main influencing factors of the excess pore pressure distribution are analyzed. A dimensionless parameter θ has been introduced because it significantly affects the phase and the amplitude of excess pore pressures. The influences of the coefficients of permeability and compressibility of soil on the excess pore pressure distribution are different and cannot be incorporated into the coefficient of consolidation in double-layered soil. The relative permeability ratio of two clayey soils also plays an important role on the curves of the distributions of the excess pore pressures. The effects of the thickness of the soil layer on the excess pore pressure distribution should be considered together with the dimensionless parameter θ and the permeability and compressibility of the double-layered soil system.

  12. Pore-scale investigation on the response of heterotrophic respiration to moisture conditions in heterogeneous soils

    Energy Technology Data Exchange (ETDEWEB)

    Yan, Zhifeng; Liu, Chongxuan; Todd-Brown, Katherine E.; Liu, Yuanyuan; Bond-Lamberty, Ben; Bailey, Vanessa L.

    2016-11-15

    The relationship between microbial respiration rate and soil moisture content is an important property for understanding and predicting soil organic carbon degradation, CO2 production and emission, and their subsequent effects on climate change. This paper reports a pore-scale modeling study to investigate the response of heterotrophic respiration to moisture conditions in soils and to evaluate various factors that affect this response. X-ray computed tomography was used to derive soil pore structures, which were then used for pore-scale model investigation. The pore-scale results were then averaged to calculate the effective respiration rates as a function of water content in soils. The calculated effective respiration rate first increases and then decreases with increasing soil water content, showing a maximum respiration rate at water saturation degree of 0.75 that is consistent with field and laboratory observations. The relationship between the respiration rate and moisture content is affected by various factors, including pore-scale organic carbon bioavailability, the rate of oxygen delivery, soil pore structure and physical heterogeneity, soil clay content, and microbial drought resistivity. Simulations also illustrates that a larger fraction of CO2 produced from microbial respiration can be accumulated inside soil cores under higher saturation conditions, implying that CO2 flux measured on the top of soil cores may underestimate or overestimate true soil respiration rates under dynamic moisture conditions. Overall, this study provides mechanistic insights into the soil respiration response to the change in moisture conditions, and reveals a complex relationship between heterotrophic microbial respiration rate and moisture content in soils that is affected by various hydrological, geochemical, and biophysical factors.

  13. effective hydraulic conductivity for a soil of variable pore size

    African Journals Online (AJOL)

    eobe

    Keywords: hydraulic conductivity, soil, infiltration, permeability, water. 1. INTRODUCTION. INTRODUCTION. INTRODUCTION. Accurate determination of hydraulic conductivity is very crucial for infiltration and runoff estimation. Factors which affect water infiltration in the soil include hydraulic conductivity, wetting front and soil.

  14. Variable pore connectivity model linking gas diffusivity and air-phase tortuosity to soil matric potential

    DEFF Research Database (Denmark)

    Chamindu, Deepagoda; Møldrup, Per; Schjønning, Per

    2012-01-01

    information on soil functional pore structure, e.g., pore network tortuosity and connectivity, can also be revealed from Dp/Do–ψ relations. Based on Dp/Do measurements in a wide range of soil types across geographically remote vadose zone profiles, this study analyzed pore connectivity for the development...... of a variable pore connectivity factor, X, as a function of soil matric potential, expressed as pF (=log |−ψ|), for pF values ranging from 1.0 to 3.5. The new model takes the form of X = X* (F/F*)A with F = 1 + pF−1, where X* is the pore network tortuosity at reference F (F*) and A is a model parameter......- and intraaggregate pore regions of aggregated soils. We further suggest that the new model with parameter values of X* = 1.7 and A = 0 may be used for upper limit Dp/Do predictions in risk assessments of, e.g., fluxes of toxic volatile organics from soil to indoor air at polluted soil sites....

  15. A random-walk model for pore pressure accumulation in marine soils

    DEFF Research Database (Denmark)

    Sumer, B. Mutlu; Cheng, Niang-Sheng

    1999-01-01

    A numerical random-walk model has been developed for the pore-water pressure. The model is based on the analogy between the variation of the pore pressure and the diffusion process of any passive quantity such as concentration. The pore pressure in the former process is analogous...... to the concentration in the latter. In the simulation, particles are released in the soil, and followed as they travel through the statistical field variables. The model has been validated (1) against the Terzaghi consolidation process, and (2) against the process where the pore pressure builds up under progressive...... waves. The model will apparently enable the researcher to handle complex geometries (such as a pipeline buried in a soil) relatively easily. Early results with regard to the latter example, namely the buildup of pore pressure around a buried pipeline subject to a progressive wave, are encouraging....

  16. Pore-Water Carbonate and Phosphate As Predictors of Arsenate Toxicity in Soil.

    Science.gov (United States)

    Lamb, Dane T; Kader, Mohammed; Wang, Liang; Choppala, Girish; Rahman, Mohammad Mahmudur; Megharaj, Mallavarapu; Naidu, Ravi

    2016-12-06

    Phytotoxicity of inorganic contaminants is influenced by the presence of competing ions at the site of uptake. In this study, interaction of soil pore-water constituents with arsenate toxicity was investigated in cucumber (Cucumis sativa L) using 10 contrasting soils. Arsenate phytotoxicity was shown to be related to soluble carbonate and phosphate. The data indicated that dissolved phosphate and carbonate had an antagonistic impact on arsenate toxicity to cucumber. To predict arsenate phytotoxicity in soils with a diverse range of soil solution properties, both carbonate and phosphate were required. The relationship between arsenic and pore-water toxicity parameters was established initially using multiple regression. In addition, based on the relationship with carbonate and phosphate we successively applied a terrestrial biotic ligand-like model (BLM) including carbonate and phosphate. Estimated effective concentrations from the BLM-like parametrization were strongly correlated to measured arsenate values in pore-water (R 2 = 0.76, P soils.

  17. Influence of pore structure on carbon retention/loss in soil macro-aggregates

    Science.gov (United States)

    Quigley, Michelle; Kravchenko, Alexandra; Rivers, Mark

    2017-04-01

    Carbon protection within soil macro-aggregates is an important component of soil carbon sequestration. Pores, as the transportation network for microorganisms, water, air and nutrients within macro-aggregates, are among the factors controlling carbon protection through restricting physical accessibility of carbon to microorganisms. The understanding of how the intra-aggregate pore structure relates to the degree of carbon physical protection, however, is currently lacking. This knowledge gap can lead to potentially inaccurate models and predictions of soil carbon's fate and storage in future changing climates. This study utilized the natural isotopic difference between C3 and C4 plants to trace the location of newly added carbon within macro-aggregates before and after decomposition and explored how location of this carbon relates to characteristics of intra-aggregate pores. To mimic the effect of decomposition, aggregates were incubated at 23˚ C for 28 days. Computed micro-tomographic images were used to determine pore characteristics at 6 μm resolution before and after incubation. Soil (0-10 cm depth) from a 20 year continuous corn (C4 plant) experiment was used. Two soil treatments were considered: 1) "destroyed-structure", where 1 mm sieved soil was used and 2) "intact-structure", where intact blocks of soil were used. Cereal rye (Secale cereale L.) (C3 plant) was grown in the planting boxes (2 intact, 3 destroyed, and one control) for three months in a greenhouse. From each box, ˜5 macro-aggregates of ˜5 mm size were collected for a total of 27 macro-aggregates. Half of the aggregates were cut into 5-11 sections, with relative positions of the sections within the aggregate recorded, and analyzed for δ13C. The remaining aggregates were incubated and then subjected to cutting and δ13C analysis. While there were no significant differences between the aggregate pore size distributions of the two treatments, the roles that specific pores sizes played in

  18. Influence of hydrological regime on pore water metal concentrations in a contaminated sediment-derived soil

    International Nuclear Information System (INIS)

    Du Laing, G.; Vanthuyne, D.R.J.; Vandecasteele, B.; Tack, F.M.G.; Verloo, M.G.

    2007-01-01

    Options for wetland creation or restoration might be limited because of the presence of contaminants in the soil. The influence of hydrological management on the pore water concentrations of Cd, Cr, Cu, Fe, Mn, Ni and Zn in the upper soil layer of a contaminated overbank sedimentation zone was investigated in a greenhouse experiment. Flooding conditions led to increased Fe, Mn, Ni and Cr concentrations and decreased Cd, Cu and Zn concentrations in the pore water of the upper soil layer. Keeping the soil at field capacity resulted in a low pore water concentration of Fe, Mn and Ni while the Cd, Cu, Cr and Zn concentrations increased. Alternating hydrological conditions caused metal concentrations in the pore water to fluctuate. Formation and re-oxidation of small amounts of sulphides appeared dominant in determining the mobility of Cd, Cu, and to a lesser extent Zn, while Ni behaviour was consistent with Fe/Mn oxidation and reduction. These effects were strongly dependent on the duration of the flooded periods. The shorter the flooded periods, the better the metal concentrations could be linked to the mobility of Ca in the pore water, which is attributed to a fluctuating CO 2 pressure. - The hydrological regime is a key factor in determining the metal concentration in the pore water of a contaminated sediment-derived soil

  19. Shifts in pore connectivity from precipitation versus groundwater rewetting increases soil carbon loss after drought

    Energy Technology Data Exchange (ETDEWEB)

    Smith, Ashly P.; Bond-Lamberty, Benjamin; Benscoter, Brian W.; Tfaily, Malak M.; Hinkle, Ross; Liu, Chongxuan; Bailey, Vanessa L.

    2017-11-06

    Droughts and other extreme precipitation events are predicted to increase in intensity, duration and extent, with uncertain implications for terrestrial carbon (C) sequestration. Soil wetting from above (precipitation) results in a characteristically different pattern of pore-filling than wetting from below (groundwater), with larger, well-connected pores filling before finer pore spaces, unlike groundwater rise in which capillary forces saturate the finest pores first. Here we demonstrate that pore-scale wetting patterns interact with antecedent soil moisture conditions to alter pore-, core- and field-scale C dynamics. Drought legacy and wetting direction are perhaps more important determinants of short-term C mineralization than current soil moisture content in these soils. Our results highlight that microbial access to C is not solely limited by physical protection, but also by drought or wetting-induced shifts in hydrologic connectivity. We argue that models should treat soil moisture within a three-dimensional framework emphasizing hydrologic conduits for C and resource diffusion.

  20. Behavior of Copper Oxide Nanoparticles in Soil Pore Waters as Influenced by Soil Characteristics, Bacteria, and Wheat Roots

    OpenAIRE

    Hortin, Joshua

    2017-01-01

    The goal of this project was to study the behavior of copper oxide nanoparticles in soil environments. Copper oxide nanoparticles have antimicrobial properties and may also be used in agricultural settings to provide a source of copper for plant health, but accidental or misapplication of these nanoparticles to soil may be damaging to the plant and its associated bacteria. Dissolved soil organic matter that is present in soil pore waters dissolved nanoparticles, but did not dissolve the ex...

  1. Silver Nanoparticle Transport Through Soil: Illuminating the Pore-Scale Processes

    Science.gov (United States)

    Molnar, I. L.; Willson, C. S.; Gerhard, J.; O'Carroll, D. M.

    2015-12-01

    For nanoparticle transport through soil, the pore-scale (i.e., tens to hundreds of grains and pores) is a crucial intermediate scale which links nanoparticle-surface interactions with field-scale transport behaviour. However, very little information exists on how nanoparticles behave within real three-dimensional pore spaces. As a result, pore-scale processes are poorly characterized for nanoparticle systems and, subsequently, continuum-scale transport models struggle to describe commonly observed 'anomalous' behaviour such as extended tailing. This knowledge gap is due to two primary factors: an inability to experimentally observe nanoparticles within real pore spaces, and the computationally expensive models required to simulate nanoparticle movement. However, due to recent advances in Synchrotron X-Ray Computed Microtomography (SXCMT), it is now possible to quantify in-situ pore-scale nanoparticle concentrations during transport through real 3-dimensional porous media [1]. Employing this SXCMT quantification method to examine real nanoparticle/soil transport experiments has yielded new insights into the pore-scale processes governing nanoparticle transport. By coupling SXCMT nanoparticle quantification method with Computational Fluid Dynamics (CFD) simulations we are able to construct a better picture of how nanoparticles flow through real pore spaces. This talk presents SXCMT/CFD analyses of three silver nanoparticle transport experiments. Silver nanoparticles were flushed through three different sands to characterize the influence of grain distribution and retention rates on pore-scale flow and transport processes. These CFD/SXCMT analyses illuminate how processes such as temporary hydraulic retention govern nanoparticle transport. In addition, the observed distributions of pore water velocities and nanoparticle mass flow rates challenge the standard conceptual model of nanoparticle transport, suggesting that pore-scale processes require explicit consideration

  2. Influence of pore structure on solute transport in degraded and undegraded fen peat soils

    Directory of Open Access Journals (Sweden)

    C. Kleimeier

    2017-10-01

    Full Text Available In peat soils, decomposition and degradation reduce the proportion of large pores by breaking down plant debris into smaller fragments and infilling inter-particle pore spaces. This affects water flow and solute migration which, in turn, influence reactive transport processes and biogeochemical functions. In this study we conducted flow-through reactor experiments to investigate the interplay between pore structure and solute transport in samples of undegraded and degraded peat collected in Canada and Germany, respectively. The pore size distributions and transport parameters were characterised using the breakthrough curve and two-region non-equilibrium transport model analyses for a non-reactive solute. The results of transport characterisation showed a higher fraction of immobile pores in the degraded peat with higher diffusive exchanges of solutes between the mobile and immobile pores associated with the dual-porosity structure. The rates of steady-state potential nitrate reduction were compared with pore fractions and exchange coefficients to investigate the influence of pore structure on the rates of nitrate reduction. The results indicated that the degraded peat has potential to provide the necessary boundary conditions to support nitrate removal and serves as a favourable substrate for denitrification, due to the nature of its pore structure and its lower organic carbon content compared to undegraded peat.

  3. Upscaling soil saturated hydraulic conductivity from pore throat characteristics

    Science.gov (United States)

    Upscaling and/or estimating saturated hydraulic conductivity Ksat at the core scale from microscopic/macroscopic soil characteristics has been actively under investigation in the hydrology and soil physics communities for several decades. Numerous models have beendeveloped based on different approac...

  4. Percolation properties of 3-D multiscale pore networks: how connectivity controls soil filtration processes

    Science.gov (United States)

    Perrier, E. M. A.; Bird, N. R. A.; Rieutord, T. B.

    2010-10-01

    Quantifying the connectivity of pore networks is a key issue not only for modelling fluid flow and solute transport in porous media but also for assessing the ability of soil ecosystems to filter bacteria, viruses and any type of living microorganisms as well inert particles which pose a contamination risk. Straining is the main mechanical component of filtration processes: it is due to size effects, when a given soil retains a conveyed entity larger than the pores through which it is attempting to pass. We postulate that the range of sizes of entities which can be trapped inside soils has to be associated with the large range of scales involved in natural soil structures and that information on the pore size distribution has to be complemented by information on a critical filtration size (CFS) delimiting the transition between percolating and non percolating regimes in multiscale pore networks. We show that the mass fractal dimensions which are classically used in soil science to quantify scaling laws in observed pore size distributions can also be used to build 3-D multiscale models of pore networks exhibiting such a critical transition. We extend to the 3-D case a new theoretical approach recently developed to address the connectivity of 2-D fractal networks (Bird and Perrier, 2009). Theoretical arguments based on renormalisation functions provide insight into multi-scale connectivity and a first estimation of CFS. Numerical experiments on 3-D prefractal media confirm the qualitative theory. These results open the way towards a new methodology to estimate soil filtration efficiency from the construction of soil structural models to be calibrated on available multiscale data.

  5. Percolation properties of 3-D multiscale pore networks: how connectivity controls soil filtration processes

    Directory of Open Access Journals (Sweden)

    E. M. A. Perrier

    2010-10-01

    Full Text Available Quantifying the connectivity of pore networks is a key issue not only for modelling fluid flow and solute transport in porous media but also for assessing the ability of soil ecosystems to filter bacteria, viruses and any type of living microorganisms as well inert particles which pose a contamination risk. Straining is the main mechanical component of filtration processes: it is due to size effects, when a given soil retains a conveyed entity larger than the pores through which it is attempting to pass. We postulate that the range of sizes of entities which can be trapped inside soils has to be associated with the large range of scales involved in natural soil structures and that information on the pore size distribution has to be complemented by information on a critical filtration size (CFS delimiting the transition between percolating and non percolating regimes in multiscale pore networks. We show that the mass fractal dimensions which are classically used in soil science to quantify scaling laws in observed pore size distributions can also be used to build 3-D multiscale models of pore networks exhibiting such a critical transition. We extend to the 3-D case a new theoretical approach recently developed to address the connectivity of 2-D fractal networks (Bird and Perrier, 2009. Theoretical arguments based on renormalisation functions provide insight into multi-scale connectivity and a first estimation of CFS. Numerical experiments on 3-D prefractal media confirm the qualitative theory. These results open the way towards a new methodology to estimate soil filtration efficiency from the construction of soil structural models to be calibrated on available multiscale data.

  6. Scaling Soil Microbe-Water Interactions from Pores to Ecosystems

    Science.gov (United States)

    Manzoni, S.; Katul, G. G.

    2014-12-01

    The spatial scales relevant to soil microbial activity are much finer than scales relevant to whole-ecosystem function and biogeochemical cycling. On the one hand, how to link such different scales and develop scale-aware biogeochemical and ecohydrological models remains a major challenge. On the other hand, resolving these linkages is becoming necessary for testing ecological hypotheses and resolving data-theory inconsistencies. Here, the relation between microbial respiration and soil moisture expressed in water potential is explored. Such relation mediates the water availability effects on ecosystem-level heterotrophic respiration and is of paramount importance for understanding CO2 emissions under increasingly variable rainfall regimes. Respiration has been shown to decline as the soil dries in a remarkably consistent way across climates and soil types (open triangles in Figure). Empirical models based on these respiration-moisture relations are routinely used in Earth System Models to predict moisture effects on ecosystem respiration. It has been hypothesized that this consistency in microbial respiration decline is due to breakage of water film continuity causing in turn solute diffusion limitations in dry conditions. However, this hypothesis appears to be at odds with what is known about soil hydraulic properties. Water film continuity estimated from soil water retention (SWR) measurements at the 'Darcy' scale breaks at far less negative water potential (micro-level relevant to microbial activity. Such downscaling resolves the inconsistency between respiration thresholds and hydrological thresholds. This result, together with observations of residual microbial activity well below -15 MPa (dashed back curve in Figure), lends support to the hypothesis that soil microbes are substrate-limited in dry conditions.

  7. The Destabilization of Protected Soil Organic Carbon Following Experimental Drought at the Pore and Core scale

    Science.gov (United States)

    Smith, A. P.; Bond-Lamberty, B. P.; Tfaily, M. M.; Todd-Brown, K. E.; Bailey, V. L.

    2015-12-01

    The movement of water and solutes through the pore matrix controls the distribution and transformation of carbon (C) in soils. Thus, a change in the hydrologic connectivity, such as increased saturation, disturbance or drought, may alter C mineralization and greenhouse gas (GHG) fluxes to the atmosphere. While these processes occur at the pore scale, they are often investigated at coarser scale. This project investigates pore- and core-scale soil C dynamics with varying hydrologic factors (simulated precipitation, groundwater-led saturation, and drought) to assess how climate-change induced shifts in hydrologic connectivity influences the destabilization of protected C in soils. Surface soil cores (0-15 cm depth) were collected from the Disney Wilderness Preserve, Florida, USA where water dynamics, particularly water table rise and fall, appear to exert a strong control on the emissions of GHGs and the persistence of soil organic matter in these soils. We measured CO2 and CH4 from soils allowed to freely imbibe water from below to a steady state starting from either field moist conditions or following experimental drought. Parallel treatments included the addition of similar quantities of water from above to simulate precipitation. Overall respiration increased in soil cores subjected to drought compared to field moist cores independent of wetting type. Cumulative CH4 production was higher in drought-induced soils, especially in the soils subjected to experimental groundwater-led saturation. Overall, the more C (from CO2 and CH4) was lost in drought-induced soils compared to field moist cores. Our results indicate that future drought events could have profound effects on the destabilization of protected C, especially in groundwater-fed soils. Our next steps focus on how to accurately capture drought-induced C destabilization mechanisms in earth system models.

  8. Computed Microtomography Quantification of Internal Pore Geometry of Soil Aggregates from Contrasting Land Management Types

    Science.gov (United States)

    Ananyeva, K.; Wang, W.; Smucker, A. J.; Kravchenko, A. N.; Chun, H. C.; Rivers, M. L.

    2010-12-01

    Structure of soil aggregate interiors controls intra-aggregate processes and provides important contributions to the biogeochemical processes of the soil profile. Applications of computed microtomography (CMT) to soil science have enabled the direct and nondestructive analyses of internal aggregate pore structures within soil volumes. The main objective of this study was to employ CMT to examine the internal pore structures of soil aggregates, 4 to 6.3 mm across, sampled at 0-20 cm depths from contrasting long-term land management types. Intra-aggregate pore-size distributions were compared among land management types. Porosity below CMT resolution (tillage, grass vegetation) than that of aggregates managed by conventional tillage (CT) used for agriculture. There was also greater percentage of intra-aggregate pores >400 µm in aggregates from NS than CT or NT management systems. In the range 15-100 µm, however, porosity of CT aggregates exceeded that of NS and NT aggregates. Total intra-aggregate porosities were similar and higher for both CT and NS (34.6 and 34.7%, correspondingly) than the 32.6% for NT aggregates. Although statistically significant, this difference (CT or NS vs. NT) was practically small, requiring at least 48 replications to be detected. These results indicate that long-term differences in management affected intra-aggregate pore size distributions. Increased 15-100 µm porosity in CT aggregates is probably related to their greater fragility. A combination of higher microporosity (400 µm in NS aggregates may generate more favorable conditions for microbial activity through a combination of larger intra-aggregate regions with high water-holding capacities and increased aeration and preferential flow pathways for intra-aggregate solute and gas transport. Our current focus is comparing and relating specifics of internal pore structures in the aggregates from contrasting land management types, to the measurements of solution and microbial flow

  9. Properties of soil pore space regulate pathways of plant residue decomposition and community structure of associated bacteria.

    Science.gov (United States)

    Negassa, Wakene C; Guber, Andrey K; Kravchenko, Alexandra N; Marsh, Terence L; Hildebrandt, Britton; Rivers, Mark L

    2015-01-01

    Physical protection of soil carbon (C) is one of the important components of C storage. However, its exact mechanisms are still not sufficiently lucid. The goal of this study was to explore the influence of soil structure, that is, soil pore spatial arrangements, with and without presence of plant residue on (i) decomposition of added plant residue, (ii) CO2 emission from soil, and (iii) structure of soil bacterial communities. The study consisted of several soil incubation experiments with samples of contrasting pore characteristics with/without plant residue, accompanied by X-ray micro-tomographic analyses of soil pores and by microbial community analysis of amplified 16S-18S rRNA genes via pyrosequencing. We observed that in the samples with substantial presence of air-filled well-connected large (>30 µm) pores, 75-80% of the added plant residue was decomposed, cumulative CO2 emission constituted 1,200 µm C g(-1) soil, and movement of C from decomposing plant residue into adjacent soil was insignificant. In the samples with greater abundance of water-filled small pores, 60% of the added plant residue was decomposed, cumulative CO2 emission constituted 2,000 µm C g(-1) soil, and the movement of residue C into adjacent soil was substantial. In the absence of plant residue the influence of pore characteristics on CO2 emission, that is on decomposition of the native soil organic C, was negligible. The microbial communities on the plant residue in the samples with large pores had more microbial groups known to be cellulose decomposers, that is, Bacteroidetes, Proteobacteria, Actinobacteria, and Firmicutes, while a number of oligotrophic Acidobacteria groups were more abundant on the plant residue from the samples with small pores. This study provides the first experimental evidence that characteristics of soil pores and their air/water flow status determine the phylogenetic composition of the local microbial community and directions and magnitudes of soil C

  10. Properties of Soil Pore Space Regulate Pathways of Plant Residue Decomposition and Community Structure of Associated Bacteria

    Science.gov (United States)

    Negassa, Wakene C.; Guber, Andrey K.; Kravchenko, Alexandra N.; Marsh, Terence L.; Hildebrandt, Britton; Rivers, Mark L.

    2015-01-01

    Physical protection of soil carbon (C) is one of the important components of C storage. However, its exact mechanisms are still not sufficiently lucid. The goal of this study was to explore the influence of soil structure, that is, soil pore spatial arrangements, with and without presence of plant residue on (i) decomposition of added plant residue, (ii) CO2 emission from soil, and (iii) structure of soil bacterial communities. The study consisted of several soil incubation experiments with samples of contrasting pore characteristics with/without plant residue, accompanied by X-ray micro-tomographic analyses of soil pores and by microbial community analysis of amplified 16S–18S rRNA genes via pyrosequencing. We observed that in the samples with substantial presence of air-filled well-connected large (>30 µm) pores, 75–80% of the added plant residue was decomposed, cumulative CO2 emission constituted 1,200 µm C g-1 soil, and movement of C from decomposing plant residue into adjacent soil was insignificant. In the samples with greater abundance of water-filled small pores, 60% of the added plant residue was decomposed, cumulative CO2 emission constituted 2,000 µm C g-1 soil, and the movement of residue C into adjacent soil was substantial. In the absence of plant residue the influence of pore characteristics on CO2 emission, that is on decomposition of the native soil organic C, was negligible. The microbial communities on the plant residue in the samples with large pores had more microbial groups known to be cellulose decomposers, that is, Bacteroidetes, Proteobacteria, Actinobacteria, and Firmicutes, while a number of oligotrophic Acidobacteria groups were more abundant on the plant residue from the samples with small pores. This study provides the first experimental evidence that characteristics of soil pores and their air/water flow status determine the phylogenetic composition of the local microbial community and directions and magnitudes of soil C

  11. Pore-water pressures associated with clogging of soil pipes: Numerical analysis of laboratory experiments

    Science.gov (United States)

    Clogging of soil pipes due to excessive internal erosion has been hypothesized to cause extreme erosion events such as landslides, debris flows, and gullies, but confirmation of this phenomenon has been lacking. Laboratory and field measurements have failed to measure pore water pressures within pip...

  12. WET-sensor pore water EC calibration for three horticultural soils

    NARCIS (Netherlands)

    Balendonck, J.; Bruins, M.A.; Wattimena, M.R.; Voogt, W.; Huys, A.

    2005-01-01

    The WET-sensor is a frequency domain dielectric sensor that measures permittivity, conductivity and temperature, which can be used for monitoring soil water content and electrical conductivity in horticulture. By using a specific model it measures pore water conductivity as well. However, under

  13. The evaluation/application of Hydrus-2D model for simulating macro-pores flow in loess soil

    OpenAIRE

    Xuexuan Xu; Shahmir Ali Kalhoro; Wen yuan Chen; Sajjad Raza

    2017-01-01

    Soil hydraulic properties were mainly governed by soil structures especially when the structures is full of the connected soil macro-pores. Therefore, the good hydrological models need to be well documented for revealing the process of soil water movement affected by soil medium. The Hydrus-2D model with double domain was recommended in simulating water movement in a heterogeneous medium of soil. To evaluate the performance of the double domain Hydrus-2D model in loess soil, the dynamic of so...

  14. Root hairs aid soil penetration by anchoring the root surface to pore walls.

    Science.gov (United States)

    Bengough, A Glyn; Loades, Kenneth; McKenzie, Blair M

    2016-02-01

    The physical role of root hairs in anchoring the root tip during soil penetration was examined. Experiments using a hairless maize mutant (Zea mays: rth3-3) and its wild-type counterpart measured the anchorage force between the primary root of maize and the soil to determine whether root hairs enabled seedling roots in artificial biopores to penetrate sandy loam soil (dry bulk density 1.0-1.5g cm(-3)). Time-lapse imaging was used to analyse root and seedling displacements in soil adjacent to a transparent Perspex interface. Peak anchorage forces were up to five times greater (2.5N cf. 0.5N) for wild-type roots than for hairless mutants in 1.2g cm(-3) soil. Root hair anchorage enabled better soil penetration for 1.0 or 1.2g cm(-3) soil, but there was no significant advantage of root hairs in the densest soil (1.5g cm(-3)). The anchorage force was insufficient to allow root penetration of the denser soil, probably because of less root hair penetration into pore walls and, consequently, poorer adhesion between the root hairs and the pore walls. Hairless seedlings took 33h to anchor themselves compared with 16h for wild-type roots in 1.2g cm(-3) soil. Caryopses were often pushed several millimetres out of the soil before the roots became anchored and hairless roots often never became anchored securely.The physical role of root hairs in anchoring the root tip may be important in loose seed beds above more compact soil layers and may also assist root tips to emerge from biopores and penetrate the bulk soil. © The Author 2016. Published by Oxford University Press on behalf of the Society for Experimental Biology.

  15. Nitrogen-mediated effects of elevated CO2 on intra-aggregate soil pore structure.

    Science.gov (United States)

    Caplan, Joshua S; Giménez, Daniel; Subroy, Vandana; Heck, Richard J; Prior, Stephen A; Runion, G Brett; Torbert, H Allen

    2017-04-01

    Soil pore structure has a strong influence on water retention, and is itself influenced by plant and microbial dynamics such as root proliferation and microbial exudation. Although increased nitrogen (N) availability and elevated atmospheric CO 2 concentrations (eCO 2 ) often have interacting effects on root and microbial dynamics, it is unclear whether these biotic effects can translate into altered soil pore structure and water retention. This study was based on a long-term experiment (7 yr at the time of sampling) in which a C 4 pasture grass (Paspalum notatum) was grown on a sandy loam soil while provided factorial additions of N and CO 2 . Through an analysis of soil aggregate fractal properties supported by 3D microtomographic imagery, we found that N fertilization induced an increase in intra-aggregate porosity and a simultaneous shift toward greater accumulation of pore space in larger aggregates. These effects were enhanced by eCO 2 and yielded an increase in water retention at pressure potentials near the wilting point of plants. However, eCO 2 alone induced changes in the opposite direction, with larger aggregates containing less pore space than under control conditions, and water retention decreasing accordingly. Results on biotic factors further suggested that organic matter gains or losses induced the observed structural changes. Based on our results, we postulate that the pore structure of many mineral soils could undergo N-dependent changes as atmospheric CO 2 concentrations rise, having global-scale implications for water balance, carbon storage, and related rhizosphere functions. © 2016 John Wiley & Sons Ltd.

  16. Can The Pore Scale Geometry Explain Soil Sample Scale Hydrodynamic Properties?

    Directory of Open Access Journals (Sweden)

    Sarah Smet

    2018-04-01

    Full Text Available For decades, the development of new visualization techniques has brought incredible insights into our understanding of how soil structure affects soil function. X-ray microtomography is a technique often used by soil scientists but challenges remain with the implementation of the procedure, including how well the samples represent the uniqueness of the pore network and structure and the systemic compromise between sample size and resolution. We, therefore, chose to study soil samples from two perspectives: a macroscopic scale with hydrodynamic characterization and a microscopic scale with structural characterization through the use of X-ray microtomography (X-ray μCT at a voxel size of 21.53 μm3 (resampled at 433 μm3. The objective of this paper is to unravel the relationships between macroscopic soil properties and microscopic soil structure. The 24 samples came from an agricultural field (Cutanic Luvisol and the macroscopic hydrodynamic properties were determined using laboratory measurements of the saturated hydraulic conductivity (Ks, air permeability (ka, and retention curves (SWRC. The X-ray μCT images were segmented using a global method and multiple microscopic measurements were calculated. We used Bayesian statistics to report the credible correlation coefficients and linear regressions models between macro- and microscopic measurements. Due to the small voxel size, we observed unprecedented relationships, such as positive correlations between log(Ks and a μCT global connectivity indicator, the fractal dimension of the μCT images or the μCT degree of anisotropy. The air permeability measured at a water matric potential of −70 kPa was correlated to the average coordination number and the X-ray μCT porosity, but was best explained by the average pore volume of the smallest pores. Continuous SWRC were better predicted near saturation when the pore-size distributions calculated on the X-ray μCT images were used as model input. We

  17. Synchrotron-based micro and nanotomographic investigations of soil aggregate microbial and pore structure

    Science.gov (United States)

    Kemner, K. M.; O'Brien, S.; Whiteside, M. D.; Sholto-Douglas, D.; Antipova, O.; Bailey, V.; Boyanov, M.; Dohnalkova, A.; Gursoy, D.; Kovarik, L.; Lai, B.; Roehrig, C.; Vogt, S.

    2017-12-01

    Soil is a highly complex network of pore spaces, minerals, and organic matter (e.g., roots, fungi, and bacteria), making it physically heterogeneous over nano- to macro-scales. Such complexity arises from feedbacks between physical processes and biological activity that generate a dynamic, self-organizing 3D complex. Since we first demonstrated the utility of synchrotron-based transmission tomography to image internal soil aggregate structure [Kemner et al., 1998], we and many other researchers have made use of and have advanced the application of this technique. However, our understanding of how microbes and microbial metabolism are distributed throughout soil aggregates is limited, because no technique is available to image the soil pore network and the life that inhabits it. X-ray transmission microtomography can provide highly detailed 3D renderings of soil structure but cannot distinguish cells from other electron-light material such as air or water. However, the use of CdSe quantum dots (QDs) as a reporter of bacterial presence enables us to overcome this constraint, instilling bacterial cells with enough contrast to detect them and their metabolic functions in their opaque soil habitat, with hard x-rays capable of penetrating 3D soil structures at high resolution. Previous transmission tomographic imaging of soil aggregates with high energy synchrotron x-rays has demonstrated 700 nm3 voxel spatial resolution. These and recent results from nanotomographic x-ray transmission imaging of soil aggregates with 30 nm3 voxel resolution will be presented. In addition, results of submicron voxel-sized x-ray fluorescence 3D imaging to determine microbial distributions within soil aggregates and the critical role to be played by the upgrade of the Advanced Photon Source for 100-1000X increases in hard x-ray brilliance will also be presented. *Kemner, et al., SPIE 3449, 45-53, 1998

  18. Eleven years' effect of conservation practices for temperate sandy loams: II. Soil pore characteristics

    DEFF Research Database (Denmark)

    Abdollahi, Lotfallah; Munkholm, Lars Juhl

    2017-01-01

    Conservation agriculture (CA) is regarded by many as a sustainable intensification strategy. Minimal soil disturbance in combination with residue retention are important CA components. This study examined the long-term effects of crop rotation, residue retention, and tillage on soil pore characte......Conservation agriculture (CA) is regarded by many as a sustainable intensification strategy. Minimal soil disturbance in combination with residue retention are important CA components. This study examined the long-term effects of crop rotation, residue retention, and tillage on soil pore...... characteristics of two Danish sandy loams. Rotation R2 is a rotation of winter crops (mainly cereals) with residues retained, rotation R3 a mix of winter and spring crops (mainly cereals) with residues removed, and rotation R4 the same mix of winter and spring crops, but with residues retained. Each rotation...... included the tillage treatments: moldboard plowing to 20-cm depth (MP), harrowing to 8- to 10-cm depth (H) and direct drilling (D). Soil cores were taken from the topsoil (4–8, 12–16, 18–27 cm) in mid-autumn 2013 and early spring 2014. Water retention, air permeability, and gas diffusivity was determined...

  19. Impact of Matric Potential and Pore Size Distribution on Growth Dynamics of Filamentous and Non-Filamentous Soil Bacteria

    NARCIS (Netherlands)

    Wolf, A.B.; Vos, de M.; Boer, de W.; Kowalchuk, G.A.

    2013-01-01

    The filamentous growth form is an important strategy for soil microbes to bridge air-filled pores in unsaturated soils. In particular, fungi perform better than bacteria in soils during drought, a property that has been ascribed to the hyphal growth form of fungi. However, it is unknown if, and to

  20. Impact of matric potential and pore size distribution on growth dynamics of filamentous and non-filamentous soil bacteria

    NARCIS (Netherlands)

    Wolf, A.B.; Vos, M.; De Boer, W.; Kowalchuk, G.A.

    2013-01-01

    The filamentous growth form is an important strategy for soil microbes to bridge air-filled pores in unsaturated soils. In particular, fungi perform better than bacteria in soils during drought, a property that has been ascribed to the hyphal growth form of fungi. However, it is unknown if, and to

  1. Pore water sampling in acid sulfate soils: a new peeper method.

    Science.gov (United States)

    Johnston, Scott G; Burton, Edward D; Keene, Annabelle F; Bush, Richard T; Sullivan, Leigh A; Isaacson, Lloyd

    2009-01-01

    This study describes the design, deployment, and application of a modified equilibration dialysis device (peeper) optimized for sampling pore waters in acid sulfate soils (ASS). The modified design overcomes the limitations of traditional-style peepers, when sampling firm ASS materials over relatively large depth intervals. The new peeper device uses removable, individual cells of 25 mL volume housed in a 1.5 m long rigid, high-density polyethylene rod. The rigid housing structure allows the device to be inserted directly into relatively firm soils without requiring a supporting frame. The use of removable cells eliminates the need for a large glove-box after peeper retrieval, thus simplifying physical handling. Removable cells are easily maintained in an inert atmosphere during sample processing and the 25-mL sample volume is sufficient for undertaking multiple analyses. A field evaluation of equilibration times indicates that 32 to 38 d of deployment was necessary. Overall, the modified method is simple and effective and well suited to acquisition and processing of redox-sensitive pore water profiles>1 m deep in acid sulfate soil or any other firm wetland soils.

  2. Mobility of arsenic, cadmium and zinc in a multi-element contaminated soil profile assessed by in-situ soil pore water sampling, column leaching and sequential extraction

    International Nuclear Information System (INIS)

    Beesley, Luke; Moreno-Jimenez, Eduardo; Clemente, Rafael; Lepp, Nicholas; Dickinson, Nicholas

    2010-01-01

    Three methods for predicting element mobility in soils have been applied to an iron-rich soil, contaminated with arsenic, cadmium and zinc. Soils were collected from 0 to 30 cm, 30 to 70 cm and 70 to 100 cm depths in the field and soil pore water was collected at different depths from an adjacent 100 cm deep trench. Sequential extraction and a column leaching test in the laboratory were compared to element concentrations in pore water sampled directly from the field. Arsenic showed low extractability, low leachability and occurred at low concentrations in pore water samples. Cadmium and zinc were more labile and present in higher concentrations in pore water, increasing with soil depth. Pore water sampling gave the best indication of short term element mobility when field conditions were taken into account, but further extraction and leaching procedures produced a fuller picture of element dynamics, revealing highly labile Cd deep in the soil profile. - Mobility of arsenic, cadmium and zinc in a polluted soil can be realistically interpreted by in-situ soil pore water sampling.

  3. Effect of pore-size distribution on the collapse behaviour of anthropogenic sandy soil deposits

    Directory of Open Access Journals (Sweden)

    Baille Wiebke

    2016-01-01

    Full Text Available In the former open-pit mines of the Lusatian region in Germany, several liquefaction events have occurred during the recent years in the anthropogenic deposits made of very loose sandy soils. These events are related to the rising ground water table after the stop of controlled ground water lowering. The very loose state is due to the formation of sand aggregates (pseudo-grains during the deposition process. The pseudo-grains enclose larger voids of dimension greater than the single sand grain. Wetting induced collapse of the pseudo-grains is presumed to be one of the possible mechanisms triggering liquefaction. In the present study, the effect of larger voids on the wetting induced deformation behaviour of sandy soils is experimentally investigated by laboratory box tests. The deformation field in the sample during wetting was measured using Digital Image Correlation (DIC technique. The results show that the observed deformations are affected by the pore size distribution, thus the amount of voids between the pseudo-grains (macro-void ratio and the voids inside the pseudo-grains (matrix void ratio. The global void ratio of a sandy soil is not sufficient as single state parameter, but the pore size distribution has to be taken into account, experimentally as well as in modelling.

  4. Soil ciliate bioassay for the pore water habitat. A missing link between microflora and earthworm testing in soil toxicity assessment

    Energy Technology Data Exchange (ETDEWEB)

    Berthold, A. [Lab. for Ecotoxicology, Univ. of Veterinary Medicine, Vienna (Austria); Jakl, T. [Chemicals Policy Unit, Federal Ministry of Agriculture, Forestry, Environment and Water Management, Vienna (Austria)

    2002-07-01

    Background, Scope and Goal. The chemical, pesticide and biocide legislation of the European Union assembles a variety of bioassays. Among the ecotoxicological tests involved, the testing strategy for the aquatic compartment builds up on three tests reflecting the main trophic levels (algae, Daphnia, fish). For the soil compartment at least one trophic level for a basic food chain is missing, namely between microflora and earthworms. Protozoa are an ideal missing link as they were shown to be the most prominent faunal contributors to nutrient cycling in soil ecosystems and as they represent the lacking first level consumers as well as the highly diverse microfauna. As protozoa inhabit the soil pore water, they can serve as direct indicators for the solved and thus bioavailable portion of xenobiotics. In order to widen the spectrum of available toxicity tests for a meaningful effect assessment for the soil compartment, a test with the soil ciliate Colpoda inflata (Ciliophora, Protozoa), introduced by Pratt et al. (1997), was improved. Methods. The novel improvements comprise a substantially refined inoculation and counting procedure, as well as the adaptation to yeast as a nutritional source. The test was designed to be rapid and easy to perform, in order to have both a higher degree of standardisation and reproducibility, as well as to be in compliance with international test guidelines. Results and Discussion. Five test substances, cadmium chloride, potassium dichromate, acetone, atrazine, and metolachlor, were used in single-compound, static, short-term exposure (24 h, 48 h) tests to examine the effect on the population growth of C. inflata. The median effective concentrations (EC50) were 0.17 to 0.26 mg/l for Cd, 34 to 63 mg/l for Cr, >3000 mg/l for acetone, 91-112 mg/l for atrazine and 83-119 mg/l for metolachlor. The equilibrium partitioning approach was used to extrapolate the results to total soil exposure and thus enable a sensitivity comparison to

  5. Evaluating the hydraulic and transport properties of peat soil using pore network modeling and X-ray micro computed tomography

    Science.gov (United States)

    Gharedaghloo, Behrad; Price, Jonathan S.; Rezanezhad, Fereidoun; Quinton, William L.

    2018-06-01

    Micro-scale properties of peat pore space and their influence on hydraulic and transport properties of peat soils have been given little attention so far. Characterizing the variation of these properties in a peat profile can increase our knowledge on the processes controlling contaminant transport through peatlands. As opposed to the common macro-scale (or bulk) representation of groundwater flow and transport processes, a pore network model (PNM) simulates flow and transport processes within individual pores. Here, a pore network modeling code capable of simulating advective and diffusive transport processes through a 3D unstructured pore network was developed; its predictive performance was evaluated by comparing its results to empirical values and to the results of computational fluid dynamics (CFD) simulations. This is the first time that peat pore networks have been extracted from X-ray micro-computed tomography (μCT) images of peat deposits and peat pore characteristics evaluated in a 3D approach. Water flow and solute transport were modeled in the unstructured pore networks mapped directly from μCT images. The modeling results were processed to determine the bulk properties of peat deposits. Results portray the commonly observed decrease in hydraulic conductivity with depth, which was attributed to the reduction of pore radius and increase in pore tortuosity. The increase in pore tortuosity with depth was associated with more decomposed peat soil and decreasing pore coordination number with depth, which extended the flow path of fluid particles. Results also revealed that hydraulic conductivity is isotropic locally, but becomes anisotropic after upscaling to core-scale; this suggests the anisotropy of peat hydraulic conductivity observed in core-scale and field-scale is due to the strong heterogeneity in the vertical dimension that is imposed by the layered structure of peat soils. Transport simulations revealed that for a given solute, the effective

  6. Effects of the stress field induced by a running tyre on the soil pore system

    DEFF Research Database (Denmark)

    Berisso, Feto Esimo; Schjønning, Per; Lamandé, Mathieu

    2013-01-01

    state in the soil profile beneath the harvester tyre was calculated using the SoilFlex model. Pore continuity index (N) and blocked air-filled porosity (εb) were estimated from the relationship between ka and air-filled porosity (εa) for a range of matric potentials. Calculated and measured stresses...... repeated wheelings were performed by a forage harvester (wheel load 6100 kg; tyre width 80 cm). Mean normal and horizontal stresses were measured with Bolling probes (at 10, 20 and 40 cm depth) and load cells (at 40, 50, 60 cm lateral distance from the centreline of the wheel rut at 10, 30 and 50 cm depth......), respectively. Intact soil cores of 100 cm3 sampled at 10, 30 and 50 cm depth in a soil transcet running from the centreline of the wheel rut to the unwheeled part of the field were used for measurements of water retention and air permeability (ka) at −30, −100 and −300 hPa matric potential. The complete stress...

  7. Seasonal and Downslope Changes in the Pore Water Geochemistry of Tundra Soils Near Nome, Alaska

    Science.gov (United States)

    Philben, M. J.; Zheng, J.; Wullschleger, S. D.; Graham, D. E.; Gu, B.

    2017-12-01

    Thawing permafrost is exposing vast stores of organic matter to decomposition in previously frozen tundra soils. In low-relief and poorly drained areas, the complexity of microbial metabolism under anaerobic conditions complicates the prediction of resulting CO2 and CH4 emissions. To improve this understanding, we investigated the dissolved gas and major ion concentrations and DOM composition in depth profiles of soil pore water collected from the Teller Road site near Nome, AK, as part of the Next Generation Ecosystem Experiment (NGEE)-Arctic. Pathways of anaerobic organic matter degradation were inferred based on two complementary approaches: first, we compared the composition of soil pore waters of saturated areas in the peat plateau and the base of the hillslope, collected early and late in the thaw season (July and September) to assess seasonal changes in the soil solution chemistry. CH4 and low molecular weight organic acids (e.g., acetate, formate, and propionate) were both near or below the detection limit in July but accumulated later in the season. In contrast, SO42- and Fe(III) concentrations were high in July and low in September, while Fe(II) was higher in September. These results suggest SO42- and Fe(III) reduction were the primary pathways for anaerobic respiration early in the thaw season, while methanogenesis increased in September as labile organic acids accumulated. Second, we assessed the change in DOM composition in a transect of piezometers, capturing the degradation of organic matter during transport down a hillslope. The DOC concentration did not change, but SUVA254 declined and the organic acid concentration increased downslope. In addition, Fourier-transform infrared spectroscopy indicated the ratio of carboxyl to amide and aromatic functional groups increased downslope. These parameters show that although there was no net loss of DOC along the transect, it was transformed to less aromatic and potentially more labile forms. Together, these

  8. Soil water retention, air flow and pore structure characteristics after corn cob biochar application to a tropical sandy loam

    DEFF Research Database (Denmark)

    Amoakwah, Emmanuel; Frimpong, Kwame Agyei; Okae-Anti, D

    2017-01-01

    Soil structure is a key soil physical property that affects soil water balance, gas transport, plant growth and development, and ultimately plant yield. Biochar has received global recognition as a soil amendment with the potential to ameliorate the structure of degraded soils. We investigated how...... corn cob biochar contributed to changes in soil water retention, air flow by convection and diffusion, and derived soil structure indices in a tropical sandy loam. Intact soil cores were taken from a field experiment that had plots without biochar (CT), and plots each with 10 t ha− 1 (BC-10), 20 t ha...... to significant increase in soil water retention compared to the CT and BC-10 as a result of increased microporosity (pores biochar had minimal impact. No significant influence of biochar was observed for ka and Dp/D0 for the BC treatments compared to the CT despite...

  9. Geochemical controls on the composition of soil pore waters beneath a mixed waste disposal site in the unsaturated zone

    International Nuclear Information System (INIS)

    Rawson, S.A.; Hubbell, J.M.

    1989-01-01

    Soil pore waters are collected routinely to monitor a thick unsaturated zone that separates a mixed waste disposal site containing transuranic and low-level radioactive wastes from the Snake River Plain aquifer. The chemistry of the soil pore waters has been studied to evaluate the possible control on the water composition by mineral equilibria and determine the extent, if any, of migration of radionuclides from the disposal site. Geochemical codes were used to perform speciation calculations for the waters. The results of speciation calculations suggest that the installation of the lysimeters affects the observed silica contents of the soil pore waters. The results also establish those chemical parameters that are controlled by secondary mineral precipitation. 15 refs., 6 figs., 1 tab

  10. Predicting Soil-Water Characteristics from Volumetric Contents of Pore-Size Analogue Particle Fractions

    DEFF Research Database (Denmark)

    Naveed, Muhammad; Møldrup, Per; Tuller, Markus

    *-model) for the SWC, derived from readily available soil properties such as texture and bulk density. A total of 46 soils from different horizons at 15 locations across Denmark were used for models evaluation. The Xw-model predicts the volumetric water content as a function of volumetric fines content (organic matter...... and clay). It performed reasonably well for the dry-end (above a pF value of 2.0; pF = log(|Ψ|), where Ψ is the matric potential in cm), but did not do as well closer to saturated conditions. The Xw*-model gives the volumetric water content as a function of volumetric content of particle size fractions...... (organic matter, clay, silt, fine and coarse sand), variably included in the model depending on the pF value. The volumetric content of a particular soil particle size fraction was included in the model if it was assumed to contribute to the pore size fraction still occupied with water at the given p...

  11. A Tilt, Soil Moisture, and Pore Water Pressure Sensor System for Slope Monitoring Applications

    Directory of Open Access Journals (Sweden)

    Rosanno de Dios

    2009-06-01

    Full Text Available This paper describes the design, implementation and characterization of a sensor network intended for monitoring of slope deformation and potential failures. The sensor network system consists of a tilt and moisture sensor column, a pore water pressure sensor column and a personal computer for data storage and processing. The tilt sensor column consists of several pipe segments containing tri-axial accelerometers and signal processing electronics. Each segment is joined together by flexible joints to allow for the column to deform and subsequently track underground movement. Capacitive-type sensors for soil moisture measurement are also included in the sensor column, which are used to measure the soil moisture at different depths. The measurements at each segment are transferred via a Controller Area Network (CAN bus, where the CAN master node is located at the top of the column above ground. The CAN master node transmits the collected data from the slave nodes via a wireless connection to a personal computer that performs data storage, processing and display via a Python-based graphical user interface (GUI. The entire system was deployed and characterized on a small-scale slope model. Slope failure was induced via water seepage and the system was demonstrated to ably measure the inclination and soil moisture content throughout the landslide event.

  12. Water vapor weathering of Taurus-Littrow orange soil - A pore-structure analysis

    Science.gov (United States)

    Cadenhead, D. A.; Mikhail, R. S.

    1975-01-01

    A pore-volume analysis was performed on water vapor adsorption data previously obtained on a fresh sample of Taurus-Littrow orange soil, and the analysis was repeated on the same sample after its exposure to moist air for a period of approximately six months. The results indicate that exposure of an outgassed sample to high relative pressures of water vapor can result in the formation of substantial micropore structure, the precise amount being dependent on the sample pretreatment, particularly the outgassing temperature. Micropore formation is explained in terms of water penetration into surface defects. In contrast, long-term exposure to moist air at low relative pressures appears to reverse the process with the elimination of micropores and enlargement of mesopores possibly through surface diffusion of metastable adsorbent material. The results are considered with reference to the storage of lunar samples.

  13. Impact of matric potential and pore size distribution on growth dynamics of filamentous and non-filamentous soil bacteria.

    Directory of Open Access Journals (Sweden)

    Alexandra B Wolf

    Full Text Available The filamentous growth form is an important strategy for soil microbes to bridge air-filled pores in unsaturated soils. In particular, fungi perform better than bacteria in soils during drought, a property that has been ascribed to the hyphal growth form of fungi. However, it is unknown if, and to what extent, filamentous bacteria may also display similar advantages over non-filamentous bacteria in soils with low hydraulic connectivity. In addition to allowing for microbial interactions and competition across connected micro-sites, water films also facilitate the motility of non-filamentous bacteria. To examine these issues, we constructed and characterized a series of quartz sand microcosms differing in matric potential and pore size distribution and, consequently, in connection of micro-habitats via water films. Our sand microcosms were used to examine the individual and competitive responses of a filamentous bacterium (Streptomyces atratus and a motile rod-shaped bacterium (Bacillus weihenstephanensis to differences in pore sizes and matric potential. The Bacillus strain had an initial advantage in all sand microcosms, which could be attributed to its faster growth rate. At later stages of the incubation, Streptomyces became dominant in microcosms with low connectivity (coarse pores and dry conditions. These data, combined with information on bacterial motility (expansion potential across a range of pore-size and moisture conditions, suggest that, like their much larger fungal counterparts, filamentous bacteria also use this growth form to facilitate growth and expansion under conditions of low hydraulic conductivity. The sand microcosm system developed and used in this study allowed for precise manipulation of hydraulic properties and pore size distribution, thereby providing a useful approach for future examinations of how these properties influence the composition, diversity and function of soil-borne microbial communities.

  14. Impact of matric potential and pore size distribution on growth dynamics of filamentous and non-filamentous soil bacteria.

    Science.gov (United States)

    Wolf, Alexandra B; Vos, Michiel; de Boer, Wietse; Kowalchuk, George A

    2013-01-01

    The filamentous growth form is an important strategy for soil microbes to bridge air-filled pores in unsaturated soils. In particular, fungi perform better than bacteria in soils during drought, a property that has been ascribed to the hyphal growth form of fungi. However, it is unknown if, and to what extent, filamentous bacteria may also display similar advantages over non-filamentous bacteria in soils with low hydraulic connectivity. In addition to allowing for microbial interactions and competition across connected micro-sites, water films also facilitate the motility of non-filamentous bacteria. To examine these issues, we constructed and characterized a series of quartz sand microcosms differing in matric potential and pore size distribution and, consequently, in connection of micro-habitats via water films. Our sand microcosms were used to examine the individual and competitive responses of a filamentous bacterium (Streptomyces atratus) and a motile rod-shaped bacterium (Bacillus weihenstephanensis) to differences in pore sizes and matric potential. The Bacillus strain had an initial advantage in all sand microcosms, which could be attributed to its faster growth rate. At later stages of the incubation, Streptomyces became dominant in microcosms with low connectivity (coarse pores and dry conditions). These data, combined with information on bacterial motility (expansion potential) across a range of pore-size and moisture conditions, suggest that, like their much larger fungal counterparts, filamentous bacteria also use this growth form to facilitate growth and expansion under conditions of low hydraulic conductivity. The sand microcosm system developed and used in this study allowed for precise manipulation of hydraulic properties and pore size distribution, thereby providing a useful approach for future examinations of how these properties influence the composition, diversity and function of soil-borne microbial communities.

  15. Visualizing and Quantifying Bioaccessible Pores in Field-Aged Petroleum Hydrocarbon-Contaminated Clay Soils Using Synchrotron-based X-ray Computed Tomography

    Science.gov (United States)

    Chang, W.; Kim, J.; Zhu, N.; McBeth, J. M.

    2015-12-01

    Microbial hydrocarbon degradation is environmentally significant and applicable to contaminated site remediation practices only when hydrocarbons (substrates) are physically bioaccessible to bacteria in soil matrices. Powerful X-rays are produced by synchrotron radiation, allowing for bioaccessible pores in soil (larger than 4 microns), where bacteria can be accommodated, colonize and remain active, can be visualized at a much higher resolution. This study visualized and quantified such bioaccessible pores in intact field-aged, oil-contaminated unsaturated soil fractions, and examined the relationship between the abundance of bioaccessible pores and hydrocarbon biodegradation. Using synchrotron-based X-ray Computed Tomography (CT) at the Canadian Light Source, a large dataset of soil particle characteristics, such as pore volumes, surface areas, number of pores and pore size distribution, was generated. Duplicate samples of five different soil fractions with different soil aggregate sizes and water contents (13, 18 and 25%) were examined. The method for calculating the number and distribution of bioaccessible pores using CT images was validated using the known porosity of Ottawa sand. This study indicated that the distribution of bioaccessible pore sizes in soil fractions are very closely related to microbial enhancement. A follow-up aerobic biodegradation experiment for the soils at 17 °C (average site temperature) over 90 days confirmed that a notable decrease in hydrocarbon concentrations occurred in soils fractions with abundant bioaccessible pores and with a larger number of pores between 10 and 100 μm. The hydrocarbon degradation in bioactive soil fractions was extended to relatively high-molecular-weight hydrocarbons (C16-C34). This study provides quantitative information about how internal soil pore characteristics can influence bioremediation performance.

  16. Soil atmosphere exchange of carbonyl sulfide (COS regulated by diffusivity depending on water-filled pore space

    Directory of Open Access Journals (Sweden)

    H. Van Diest

    2008-04-01

    Full Text Available The exchange of carbonyl sulfide (COS between soil and the atmosphere was investigated for three arable soils from Germany, China and Finland and one forest soil from Siberia for parameterization in the relation to ambient carbonyl sulfide (COS concentration, soil water content (WC and air temperature. All investigated soils acted as sinks for COS. A clear and distinct uptake optimum was found for the German, Chinese, Finnish and Siberian soils at 11.5%, 9%, 11.5%, and 9% soil WC, respectively, indicating that the soil WC acts as an important biological and physical parameter for characterizing the exchange of COS between soils and the atmosphere. Different optima of deposition velocities (Vd as observed for the Chinese, Finnish and Siberian boreal soil types in relation to their soil WC, aligned at 19% in relation to the water-filled pore space (WFPS, indicating the dominating role of gas diffusion. This interpretation was supported by the linear correlation between Vd and bulk density. We suggest that the uptake of COS depends on the diffusivity dominated by WFPS, a parameter depending on soil WC, soil structure and porosity of the soil.

  17. Linking particle and pore-size distribution parameters to soil gas transport properties

    DEFF Research Database (Denmark)

    Arthur, Emmanuel; Møldrup, Per; Schjønning, Per

    2012-01-01

    , respectively) and the Campbell water retention parameter b were used to characterize particle and pore size distributions, respectively. Campbell b yielded a wide interval (4.6–26.2) and was highly correlated with α, β, and volumetric clay content. Both Dp/Do and ka followed simple power-law functions (PLFs......) of air-filled porosity (εa). The PLF tortuosity–connectivity factors (X*) for Dp/Do and ka were both highly correlated with all basic soil characteristics, in the order of volumetric clay content = Campbell b > gravimetric clay content > α > β. The PLF water blockage factors (H) for Dp/Do and ka were...... also well (but relatively more weakly) correlated with the basic soil characteristics, again with the best correlations to volumetric clay content and b. As a first attempt at developing a simple Dp/Do model useful at the field scale, we extended the classical Buckingham Dp/Do model (εa2) by a scaling...

  18. Using in situ pore water concentrations to estimate the phytotoxicity of nicosulfuron in soils to corn (Zea mays L.).

    Science.gov (United States)

    Liu, Kailin; Cao, Zhengya; Pan, Xiong; Yu, Yunlong

    2012-08-01

    The phytotoxicity of an herbicide in soil is typically dependent on the soil characteristics. To obtain a comparable value of the concentration that inhibits growth by 50% (IC50), 0.01 M CaCl(2) , excess pore water (EPW) and in situ pore water (IPW) were used to extract the bioavailable fraction of nicosulfuron from five different soils to estimate the nicosulfuron phytotoxicity to corn (Zea mays L.). The results indicated that the phytotoxicity of nicosulfuron in soils to corn depended on the soil type, and the IC50 values calculated based on the amended concentration of nicosulfuron ranged from 0.77 to 9.77 mg/kg among the five tested soils. The range of variation in IC50 values for nicosulfuron was smaller when the concentrations of nicosulfuron extracted with 0.01 M CaCl(2) and EPW were used instead of the amended concentration. No significant difference was observed among the IC50 values calculated from the IPW concentrations of nicosulfuron in the five tested soils, suggesting that the concentration of nicosulfuron in IPW could be used to estimate the phytotoxicity of residual nicosulfuron in soils. Copyright © 2012 SETAC.

  19. Effects of sand compaction and mixing on pore structure and the unsaturated soil hydraulic properties

    NARCIS (Netherlands)

    Mahmoodlu, Mojtaba Ghareh; Raoof, A.; Sweijen, T.; van Genuchten, M. Th

    2016-01-01

    The hydraulic properties of unsaturated porous media very much depend on their pore structure as defined by the size, arrangement, and connectivity of pores. Several empirical and quasi-empirical approaches have been used over the years to derive pore structure information from the particle size

  20. Syncrude`s highway berm: part 3 of 5 - Soil parameters (pore pressure parameters and settlement from inundation)

    Energy Technology Data Exchange (ETDEWEB)

    Cameron, R.; Fong, V.; Ashton, C.; Strueby, B. [Syncrude Canada Ltd., Edmonton, AB (Canada)

    1995-12-31

    Difficulties in predicting pore fluid pressures in the fills composing the highway berm were discussed. The pore water pressures in the in-situ clay foundation units were expected to be very sensitive to water content. Over 200 piezometer tips were installed into fill and in situ soil units, and results of the measurements were reported. The in situ basal foundation clays and sands were found to have a similar pore pressure ratio of typically less than 0.25. Fill pore fluid pressure ratios determined in the field varied according to density when loose fills were compared to very dense fills. To illustrate, when the fill was 86% to 91% of maximum Standard Proctor Density, the pore pressure ratio value was not dependent on fluid content. When the fill was densely compacted to 98% Standard Proctor Density, the pore pressure ratio was largely dependent on the fluid content as it related to the optimum fluid content determined from Standard Proctor testing. Significant first-time wetting settlement was observed to occur with fills at initial densities of around 90% of maximum Standard Proctor dry density. Settlements for fills placed initially above 97% Standard Proctor Density generally had inundation settlements of less than 0.3% of fill thickness predicted from laboratory testing. 4 refs., 10 figs., 1 tab.

  1. Visualization of soil structure and pore structure modifications by pioneering ground beetles (Cicindelidae) in surface sediments of an artificial catchment

    Science.gov (United States)

    Badorreck, Annika; Gerke, Horst H.; Weller, Ulrich; Vontobel, Peter

    2010-05-01

    An artificial catchment was constructed to study initial soil and ecosystem development. As a key process, the pore structure dynamics in the soil at the surface strongly influences erosion, infiltration, matter dynamics, and vegetation establishment. Little is known, however, about the first macropore formation in the very early stage. This presentation focuses on observations of soil pore geometry and its effect on water flow at the surface comparing samples from three sites in the catchment and in an adjacent "younger" site composed of comparable sediments. The surface soil was sampled in cylindrical plastic rings (10 cm³) down to 2 cm depth in three replicates each site and six where caves from pioneering ground-dwelling beetles Cicindelidae were found. The samples were scanned with micro-X-ray computed tomography (at UFZ-Halle, Germany) with a resolution of 0.084 mm. The infiltration dynamics were visualized with neutronradiography (at Paul-Scherer-Institute, Switzerland) on slab-type soil samples in 2D. The micro-tomographies exhibit formation of surface sealing whose thickness and intensity vary with silt and clay content. The CT images show several coarser- and finer-textured micro-layers at the sample surfaces that were formed as a consequence of repeated washing in of finer particles in underlying coarser sediment. In micro-depressions, the uppermost layers consist of sorted fine sand and silt due to wind erosion. Similar as for desert pavements, a vesicular pore structure developed in these sediments on top, but also scattered in fine sand- and silt-enriched micro-layers. The ground-dwelling activity of Cicindelidae beetles greatly modifies the soil structure through forming caves in the first centimetres of the soil. Older collapsed caves, which form isolated pores within mixed zones, were also found. The infiltration rates were severely affected both, by surface crusts and activity of ground-dwelling beetles. The observations demonstrate relatively

  2. Batch experiments versus soil pore water extraction--what makes the difference in isoproturon (bio-)availability?

    Science.gov (United States)

    Folberth, Christian; Suhadolc, Metka; Scherb, Hagen; Munch, Jean Charles; Schroll, Reiner

    2009-10-01

    Two approaches to determine pesticide (bio-)availability in soils (i) batch experiments with "extraction with an excess of water" (EEW) and (ii) the recently introduced "soil pore water (PW) extraction" of pesticide incubated soil samples have been compared with regard to the sorption behavior of the model compound isoproturon in soils. A significant correlation between TOC and adsorbed pesticide amount was found when using the EEW approach. In contrast, there was no correlation between TOC and adsorbed isoproturon when using the in situ PW extraction method. Furthermore, sorption was higher at all concentrations in the EEW method when comparing the distribution coefficients (K(d)) for both methods. Over all, sorption in incubated soil samples at an identical water tension (-15 kPa) and soil density (1.3 g cm(-3)) appears to be controlled by a complex combination of sorption driving soil parameters. Isoproturon bioavailability was found to be governed in different soils by binding strength and availability of sorption sites as well as water content, whereas the dominance of either one of these factors seems to depend on the individual composition and characteristics of the respective soil sample. Using multiple linear regression analysis we obtained furthermore indications that the soil pore structure is affected by the EEW method due to disaggregation, resulting in a higher availability of pesticide sorption sites than in undisturbed soil samples. Therefore, it can be concluded that isoproturon sorption is overestimated when using the EEW method, which should be taken into account when using data from this approach or similar batch techniques for risk assessment analysis.

  3. Comparison of pore water samplers and cryogenic distillation under laboratory and field conditions for soil water stable isotope analysis.

    Science.gov (United States)

    Thoma, Michael; Frentress, Jay; Tagliavini, Massimo; Scandellari, Francesca

    2018-02-15

    We used pore water samplers (PWS) to sample for isotope analysis (1) only water, (2) soil under laboratory conditions, and (3) soil in the field comparing the results with cryogenic extraction (CE). In (1) and (2), no significant differences between source and water extracted with PWS were detected with a mean absolute difference (MAD) always lower than 2 ‰ for δ 2 H and 1 ‰ for δ 18 O. In (2), CE water was more enriched than PWS-extracted water, with a MAD respect to source water of roughly 8 ‰ for δ 2 H and 4 ‰ for δ 18 O. In (3), PWS water was enriched relative to CE water by 3 ‰ for δ 2 H and 0.9 ‰ for δ 18 O. The latter result may be due to the distinct water portions sampled by the two methods. Large pores, easily sampled by PWS, likely retain recent, and enriched, summer precipitation while small pores, only sampled by CE, possibly retain isotopically depleted water from previous winter precipitation or irrigation inputs. Accuracy and precision were greater for PWS relative to CE. PWS is therefore suggested as viable tool to extract soil water for stable isotope analysis, particularly for soils used in this study (sandy and silty loams).

  4. Emerging organic pollutants in the vadose zone of a soil aquifer treatment system: Pore water extraction using positive displacement.

    Science.gov (United States)

    Sopilniak, Alexander; Elkayam, Roy; Rossin, Anna Voloshenko; Lev, Ovadia

    2018-01-01

    Trace organic compounds in effluents, water streams and aquifers are amply reported. However, the mobile pool of Emerging Organic Contaminants (EOCs) in the deep parts of the vadose zone is hard to estimate, due to difficulties in extraction of sufficient quantity of pore water. Here, we present a new methodology for depth profiling of EOCs in pore water by Positive Displacement Extraction (PDE): Pore water extraction from unsaturated soil samples is carried out by withdrawal of soil cores by direct-push drilling and infiltrating the core by organics free water. We show that EOC concentrations in the water eluted in the plateau region of the inverse breakthrough curve is equal to their pore water concentrations. The method was previously validated for DOC extraction, and here the scope of the methodology is extended to pore water extraction for organic pollutants analysis. Method characteristics and validation were carried out with atrazine, simazine, carbamazepine, venlafaxine, O-desmethylvenlafaxine and caffeine in the concentration range of several ng to several μg/liter. Validation was carried out by laboratory experiments on three different soils (sandy, sandy-clayey and clayey). Field studies in the vadose zone of a SAT system provided 27 m deep EOC profiles with less than 1.5 m spatial resolution. During the percolation treatment, carbamazepine remained persistent, while the other studied EOCs were attenuated to the extent of 50-99%.The highest degradation rate of all studied EOCs was in the aerobic zone. EOC levels based on PDE and extraction by centrifugation were compared, showing a positive bias for centrifugation. Copyright © 2017 Elsevier Ltd. All rights reserved.

  5. Evaluation of 1H NMR relaxometry for the assessment of pore size distribution in soil samples

    NARCIS (Netherlands)

    Jaeger, F.; Bowe, S.; As, van H.; Schaumann, G.E.

    2009-01-01

    1H NMR relaxometry is used in earth science as a non-destructive and time-saving method to determine pore size distributions (PSD) in porous media with pore sizes ranging from nm to mm. This is a broader range than generally reported for results from X-ray computed tomography (X-ray CT) scanning,

  6. The role of pore soil solutions in redistribution of 137Cs, 90Sr, 239,240Pu and 241Am within soil-vegetative cover

    International Nuclear Information System (INIS)

    Ovsiannikova, S.V.; Sokolik, G.A.; Kilchitskaya, S.L.; Eismont, E.A.; Zhukovich, N.V.; Kimlenko, I.M.

    1998-01-01

    The role of pore soil solutions in the migration of 137 Cs, 90 Sr, 239,240 Pu and 241 Am within soil-vegetative cover of natural ecosystems was examined. The soil solutions were found to play an important role in the redistribution of 137 Cs, 90 Sr, 239,240 Pu and 241 Am in the soil-plant systems. Obvious relationships between the distribution coefficients of radionuclides between solid and liquid phases (K d ) and the intensity of vertical migration of 137 Cs, 90 Sr, 239,240 Pu and 241 Am along the soil profiles and with intensity of their accumulation by grass vegetation of natural meadows have been obtained. It means that the distribution coefficient may be used as a criterion of the radionuclide mobility in the soil-plant system whatever its level of radioactive contamination is. The influence of the degree of soil moistening, the content of mobile radionuclide forms in the soils and some characteristics of pore soil solutions (pH, content of K + , Ca 2+ , NH 4 + , water soluble organic substances) on the concentration of radionuclide in the soil solutions and on the value of radionuclide distribution coefficient have been analysed. The results of investigation are of great importance in the evaluation of radioecological situation and in solution of problems of radioecological rehabilitation of the contaminated territories. The received data constitute a part of scientific basis for the development of a system of countermeasures to decrease the mobility and biological availability of radionuclides of high and very high radiotoxicity

  7. Effect of long-term organic fertilization on the soil pore characteristics of greenhouse vegetable fields converted from rice-wheat rotation fields.

    Science.gov (United States)

    Xu, L Y; Wang, M Y; Shi, X Z; Yu, Q B; Shi, Y J; Xu, S X; Sun, W X

    2018-08-01

    The shift from rice-wheat rotation (RWR) to greenhouse vegetable soils has been widely practiced in China. Several studies have discussed the changes in soil properties with land-use changes, but few studies have sought to address the differences in soil pore properties, especially for fields based on long-term organic fertilization under greenhouse vegetable system from RWR fields. This study uses the X-ray computed tomography (CT) scanning and statistical analysis to compare the long-term effects of the conversion of organic greenhouse vegetable fields (over one year, nine years, and fourteen years) from RWR fields on the soil macropore structure as well as the influencing factors from samples obtained in Nanjing, Jiangsu, China, using the surface soil layer and triplicate samples. The results demonstrated that the macropore structure became more complex and stable, with a higher connectivity, fractal dimension (FD) and a lower degree of anisotropy (DA), as the greenhouse vegetable planting time increased. The total topsoil macroporosity increased considerably, but the rate of increase gradually decelerated with time. The transmission pores (round pores ranging from 50 to 500μm) increased with time, but the biopores (>2000μm) clearly decreased after nine years of use as greenhouse vegetable fields. Soil organic matter (OM) has a significant relationship with the soil pore structure characteristics, especially for the transmission pores. In addition, organic fertilization on the topsoil had a short-term effect on the pores, but the effect stabilized and had a weak influence on the pores over longer periods. These results suggested that organic fertilization was conducive for controlling soil degradation regarding it physical quality for water and oxygen availability in the short term. Copyright © 2018 Elsevier B.V. All rights reserved.

  8. CT measurements of SAP voids in concrete

    DEFF Research Database (Denmark)

    Laustsen, Sara; Bentz, Dale P.; Hasholt, Marianne Tange

    2010-01-01

    X-ray computed tomography (CT) scanning is used to determine the SAP void distribution in hardened concrete. Three different approaches are used to analyse a binary data set created from CT measurement. One approach classifies a cluster of connected, empty voxels (volumetric pixel of a 3D image......) as one void, whereas the other two approaches are able to classify a cluster of connected, empty voxels as a number of individual voids. Superabsorbent polymers (SAP) have been used to incorporate air into concrete. An advantage of using SAP is that it enables control of the amount and size...... of the created air voids. The results indicate the presence of void clusters. To identify the individual voids, special computational approaches are needed. The addition of SAP results in a dominant peak in two of the three air void distributions. Based on the position (void diameter) of the peak, it is possible...

  9. Deriving the suction stress of unsaturated soils from water retention curve, based on wetted surface area in pores

    Science.gov (United States)

    Greco, Roberto; Gargano, Rudy

    2016-04-01

    The evaluation of suction stress in unsaturated soils has important implications in several practical applications. Suction stress affects soil aggregate stability and soil erosion. Furthermore, the equilibrium of shallow unsaturated soil deposits along steep slopes is often possible only thanks to the contribution of suction to soil effective stress. Experimental evidence, as well as theoretical arguments, shows that suction stress is a nonlinear function of matric suction. The relationship expressing the dependence of suction stress on soil matric suction is usually indicated as Soil Stress Characteristic Curve (SSCC). In this study, a novel equation for the evaluation of the suction stress of an unsaturated soil is proposed, assuming that the exchange of stress between soil water and solid particles occurs only through the part of the surface of the solid particles which is in direct contact with water. The proposed equation, based only upon geometric considerations related to soil pore-size distribution, allows to easily derive the SSCC from the water retention curve (SWRC), with the assignment of two additional parameters. The first parameter, representing the projection of the external surface area of the soil over a generic plane surface, can be reasonably estimated from the residual water content of the soil. The second parameter, indicated as H0, is the water potential, below which adsorption significantly contributes to water retention. For the experimental verification of the proposed approach such a parameter is considered as a fitting parameter. The proposed equation is applied to the interpretation of suction stress experimental data, taken from the literature, spanning over a wide range of soil textures. The obtained results show that in all cases the proposed relationships closely reproduces the experimental data, performing better than other currently used expressions. The obtained results also show that the adopted values of the parameter H0

  10. The use of 36Cl diffusion to asses changes in pore geometry of allophane soils resulting from drying

    International Nuclear Information System (INIS)

    Holder, G.D.

    1984-01-01

    The apparent diffusion coefficient of 36 Cl is used to assess pore geometric changes in allophane soil resulting from drying. The diffusion method is based on the boundary condition of a planar source diffusing into an infinite medium. The extent of structural changes accompanying drying was indicated by changes in slope of a plot between geometric and interaction factors versus volumetric moisture content. Structural change was least for freeze drying to be followed by a larger but equal change for air and oven drying. (M.A.C.) [pt

  11. Water retention, gas transport, and pore network complexity during short-term regeneration of soil structure

    DEFF Research Database (Denmark)

    Arthur, Emmanuel; Møldrup, Per; Schjønning, Per

    2013-01-01

    mm sieved) samples of varying clay mineralogy (illite, kaolinite, and smectite) amended with organic material (7.5 t ha–1). Also, the newly-formed structure was compared with that of sieved repacked (SR) and natural intact samples. Assessment and comparison of structure complexity and organization....... The proportion of pores > 100 1m increased in order: smectite

  12. Elucidating the mechanical effects of pore water pressure increase on the stability of unsaturated soil slopes

    Science.gov (United States)

    Buscarnera, G.

    2012-12-01

    The increase of the pore water pressure due to rain infiltration can be a dominant component in the activation of slope failures. This paper shows an application of the theory of material stability to the triggering analysis of this important class of natural hazards. The goal is to identify the mechanisms through which the process of suction removal promotes the initiation of mechanical instabilities. The interplay between increase in pore water pressure, and failure mechanisms is investigated at material point level. In order to account for multiple failure mechanisms, the second-order work criterion is used and different stability indices are devised. The paper shows that the theory of material stability can assess the risk of shear failure and static liquefaction in both saturated and unsaturated contexts. It is shown that the combined use of an enhanced definition of second-order work for unsaturated porous media and a hydro-mechanical constitutive framework enables to retrieve bifurcation conditions for water-infiltration processes in unsaturated deposits. This finding discloses the importance of the coupling terms that incorporate the interaction between the solid skeleton and the pore fluids. As a consequence, these theoretical results suggest that some material properties that are not directly associated with the shearing resistance (e.g., the potential for wetting compaction) can play an important role in the initiation of slope failures. According to the proposed interpretation, the process of pore pressure increase can be understood as a trigger of uncontrolled strains, which at material point level are reflected by the onset of bifurcation conditions.

  13. Compaction and rotovation effects on soil pore characteristics of a loamy sand soil with contrasting organic matter content

    DEFF Research Database (Denmark)

    Eden, Marie; Schjønning, Per; Møldrup, Per

    2011-01-01

    only mineral fertilizer (MF) or, in addition, animal manure (OF). Undisturbed soil cores were taken from two separate fields in consecutive years at an identical stage in the crop rotation. We measured soil organic carbon (OC), soil microbial biomass carbon (BC), and hot-water extractable carbon (Chot...... OF had larger porosity than that from treatment MF. Treatment P eliminated this difference and significantly reduced the volume of macropores. This interaction between soil organic matter content and mechanical impact was also reflected in the gas diffusion data. Specific air permeability was mainly...

  14. Relationship between chemical structure of soil organic matter and intra-aggregate pore structure: evidence from X-ray computed micro-tomography

    Science.gov (United States)

    Kravchenko, Alexandra; Grandy, Stuart A.

    2014-05-01

    Understanding chemical structure of soil organic matter (SOM) and factors that affect it are vital for gaining understanding of mechanisms of C sequestration by soil. Physical protection of C by adsorption to mineral particles and physical disconnection between C sources and microbial decomposers is now regarded as the key component of soil C sequestration. Both of the processes are greatly influenced by micro-scale structure and distribution of soil pores. However, because SOM chemical structure is typically studied in disturbed (ground and sieved) soil samples the experimental evidence of the relationships between soil pore structure and chemical structure of SOM are still scarce. Our study takes advantage of the X-ray computed micro-tomography (µ-CT) tools that enable non-destructive analysis of pore structure in intact soil samples. The objective of this study is to examine the relationship between SOM chemical structure and pore-characteristics in intact soil macro-aggregates from two contrasting long-term land uses. The two studied land use treatments are a conventionally tilled corn-soybean-wheat rotation treatment and a native succession vegetation treatment removed from agricultural use >20 years ago. The study is located in southwest Michigan, USA, on sandy-loam Typic Hapludalfs. For this study we used soil macro-aggregates 4-6 mm in size collected at 0-15 cm depth. The aggregate size was selected so as both to enable high resolution of µ-CT and to provide sufficient amount of soil for C measurements. X-ray µ-CT scanning was conducted at APS Argonne at a scanning resolution of 14 µm. Two scanned aggregates (1 per treatment) were used in this preliminary study. Each aggregate was cut into 7 "geo-referenced" sections. Analyses of pore characteristics in each section were conducted using 3DMA and ImageJ image analysis tools. SOM chemistry was analyzed using pyrolysis/gas chromatography-mass spectroscopy. Results demonstrated that the relationships

  15. Seasonal Effects on the Relationships Between Soil Water Content, Pore Water Pressure and Shear Strength and Their Implications for Slope Stability

    Science.gov (United States)

    Hughes, P. N.

    2015-12-01

    A soil's shear resistance is mainly dependent upon the magnitude of effective stress. For small to medium height slopes (up to 10m) in clay soils the total stress acting along potential failure planes will be low, therefore the magnitude of effective stress (and hence soil shear strength) will be dominated by the pore-water pressure. The stability of slopes on this scale through periods of increased precipitation is improved by the generation of negative pore pressures (soil suctions) during preceding, warmer, drier periods. These negative pore water pressures increase the effective stress within the soil and cause a corresponding increase in shearing resistance. The relationships between soil water content and pore water pressure (soil water retention curves) are known to be hysteretic, but for the purposes of the majority of slope stability assessments in partially saturated clay soils, these are assumed to be consistent with time. Similarly, the relationship between shear strength and water content is assumed to be consistent over time. This research presents a laboratory study in which specimens of compacted Glacial Till (typical of engineered slopes within the UK) were subjected to repeated cycles of wetting and drying to simulate seasonal cycles. At predetermined water contents, measurements of soil suction were made using tensiometer and dewpoint potentiometer methods. The undrained shear strength of the specimens was then measured using triaxial strength testing equipment. Results indicate that repeated wetting and drying cycles caused a change in the soil water retention behaviour. A reduction in undrained shear strength at corresponding water contents along the wetting and drying paths was also observed. The mechanism for the change in the relationship is believed to be a deterioration in the soil physical structure due to shrink/swell induced micro-cracking. The non-stationarity of these relationships has implications for slope stability assessment.

  16. Persistent effects of subsoil compaction on pore size distribution and gas transport in a loamy soil

    DEFF Research Database (Denmark)

    Berisso, Feto Esimo; Schjønning, Per; Keller, T

    2012-01-01

    included four repeated wheelings with ∼10 Mg wheel loads. Water retention characteristics (WRC), air permeability (ka) and gas diffusivity (Ds/Do) were measured. A dual-porosity model fitted the WRC well, and there was a reduction in the volume of macropores >30 μm in compacted compared with control soil...... for all soil depths. Averaged for all sampling depths and also for some individual depths, both ka and Ds/Do were significantly reduced by compaction. Gas transport measurements showed that the experimental soil was poorly aerated, with local anoxic conditions at water regimes around field capacity in all...

  17. Enhancing Bioremediation of Oil-contaminated Soils by Controlling Nutrient Transport using Dual Characteristics of Soil Pore Structure

    Science.gov (United States)

    Mori, Y.; Suetsugu, A.; Matsumoto, Y.; Fujihara, A.; Suyama, K.; Miyamoto, T.

    2012-12-01

    Soil structure is heterogeneous with cracks or macropores allowing bypass flow, which may lead to applied chemicals avoiding interaction with soil particles or the contaminated area. We investigated the bioremediation efficiency of oil-contaminated soils by applying suction at the bottom of soil columns during bioremediation. Unsaturated flow conditions were investigated so as to avoid bypass flow and achieve sufficient dispersion of chemicals in the soil column. The boundary conditions at the bottom of the soil columns were 0 kPa and -3 kPa, and were applied to a volcanic ash soil with and without macropores. Unsaturated flow was achieved with -3 kPa and an injection rate of 1/10 of the saturated hydraulic conductivity. The resultant biological activities of the effluent increased dramatically in the unsaturated flow with macropores condition. Unsaturated conditions prevented bypass flow and allowed dispersion of the injected nutrients. Unsaturated flow achieved 60-80% of saturation, which enhanced biological activity in the soil column. Remediation results were better for unsaturated conditions because of higher biological activity. Moreover, unsaturated flow with macropores achieved uniform remediation efficiency from upper through lower positions in the column. Finally, taking the applied solution volume into consideration, unsaturated flow with -3 kPa achieved 10 times higher efficiency when compared with conventional saturated flow application. These results suggest that effective use of nutrients or remediation chemicals is possible by avoiding bypass flow and enhancing biological activity using relatively simple and inexpensive techniques.

  18. Transport properties and pore-network structure in variably-saturated Sphagnum peat soil

    DEFF Research Database (Denmark)

    Hamamoto, Shoichiro; Dissanayaka, Shiromi Himalika; Kawamoto, K.

    2016-01-01

    Gas and water transport in peat soil are of increasing interest because of their potentially large environmental and climatic effects under different types of land use. In this research, the water retention curve (WRC), gas diffusion coefficient (Dg) and air and water permeabilities (ka and kw......) of layers in peat soil from two profiles were measured under different moisture conditions. A two-region Archie's Law (2RAL)-type model was applied successfully to the four properties; the reference point was taken at -9.8kPa of soil-water matric potential where volume shrinkage typically started to occur....... For WRC in the very decomposed peat soil, the 2RAL saturation exponents (n) obtained for both the wetter (nw) and drier regions (nd) were smaller than those for the less decomposed peat. For Dg, the saturation exponent in the wetter region was larger than that in the drier one for all layers, which...

  19. Numerical study on the influence of entrapped air bubbles on the time-dependent pore pressure distribution in soils due to external changes in water level

    Directory of Open Access Journals (Sweden)

    Ausweger Georg M.

    2016-01-01

    Full Text Available In practical geotechnical engineering soils below the groundwater table are usually regarded as a two-phase medium, consisting of solids and water. The pore water is assumed to be incompressible. However, under certain conditions soils below the groundwater table may exhibit a liquid phase consisting of water and air. The air occurs in form of entrapped air bubbles and dissolved air. Such conditions are named quasi-saturated and the assumption of incompressibility is no longer justified. In addition the entrapped air bubbles influence the hydraulic conductivity of soils. These effects are usually neglected in standard problems of geotechnical engineering. However, sometimes it is required to include the pore fluid compressibility when modelling the hydraulic behaviour of soils in order to be able to explain certain phenomena observed in the field. This is for example true for fast fluctuating water levels in reservoirs. In order to study these phenomena, numerical investigations on the influence of the pore fluid compressibility on the pore water pressure changes in a soil layer beneath a reservoir with fast fluctuating water levels were performed. Preliminary results of this study are presented and it could be shown that numerical analysis and field data are in good agreement.

  20. How ISCO Can Interfere in Soil Pore Distribution and Solute Transport

    Science.gov (United States)

    Favero, M.; Freitas, J. G.; Furquim, S. A. C.; Thomson, N. R.; Cooper, M.

    2016-12-01

    Recently in situ chemical oxidation (ISCO) has been a remedy of choice for sites contaminated with organic compounds. However, the impact of the chemical oxidant on soil properties and, therefore, on solute transport and remediation efficiency still lacks understanding. This research effort sought to evaluate the changes in soil physical properties and solute transport behavior in a typical tropical soil (Oxisol) resulting from exposure to persulfate. The Oxisol used had a microaggregate structure, resulting in a relatively high hydraulic conductivity despite the high clay content (67%). One-dimensional laboratory experiments were performed using a saturated undisturbed column. The injection of an ideal tracer (bromide), a reactive tracer (phenol) and persulfate (12 ± 1 gL-1 for 30 d) were performed consecutively. The tracer tests were repeated following persulfate injection. Transport parameters (longitudinal dispersivity: αL and retardation factor: R) and the effective porosity (ne) were obtained by fitting the breakthrough curves with an analytical solution for one-dimensional transport. Micromorphological analyses of porosity were conducted on impregnated soil blocks from control and oxidized systems. The bromide and phenol tracer test data yielded αL of 2.431 ± 0.002 cm, ne of 41.99 ± 1.52 %, R of 1.10, and a first-order decay rate coefficient of 6.5x10-5 min-1 prior to persulfate exposure. The effluent persulfate concentration stabilized at C/Co of 0.8 after 4 d of injection and the breakthrough was delayed relative to bromide. Concurrent with the breakthrough of persulfate, the pH decreased and a progressive release of Al (III) over the first 4 d with subsequent stabilization were observed. Following persulfate exposures the hydraulic conductivity increased about one-order of magnitude. Micromorphological analysis showed that persulfate produced alterations in poroids types, with an increase of complex packing voids. It was verified that persulfate

  1. Investigation of Pore Scale Processes That Affect Soil Vapor Extraction. Final Technical Report EMSP 70045

    International Nuclear Information System (INIS)

    Valocchi, Albert J.; Werth, Charles W.; Webb, Andrew W.

    2004-01-01

    Dense nonaqueous phase liquid (DNAPL) contamination in the vadose zone is a significant problem at Department of Energy sites. Soil vapor extraction (SVE) is commonly used to remediate DNAPLs from the vadose zone. In most cases, a period of high recovery has been followed by a sustained period of low recovery. This behavior has been attributed to multiple processes including slow interphase mass transfer, retarded vapor phase transport, and diffusion from unswept zones of low permeability. This research project used a combination of laboratory experimentation and mathematical modeling to determine how these various processes interact to limit the removal of DNAPL components in heterogeneous porous media during SVE. Our results were applied to scenarios typical of the carbon tetrachloride spill zone at the Hanford Site. Our results indicate that: (a) the initial distribution of the spilled DNAPL (i.e., the spill-zone architecture) has a major influence upon the performance of any subsequent SVE operations; (b) while the pattern of higher and lower conductivity soil zones has an important impact upon spill zone architecture, soil moisture distribution plays an even larger role when there are large quantities of co-disposed waste-water (as in the Hanford scenario); (c) depending upon soil moisture dynamics, liquid DNAPL that is trapped by surrounding water is extremely difficult to remove by SVE; (d) natural barometric pumping can remove a large amount of the initial DNAPL mass for spills occurring close to the land surface, and hence the initial spilled inventory will be over-estimated if this process is neglected

  2. Suitability of seven species of soil-inhabiting invertebrates for testing toxicity of pesticides in soil pore water

    NARCIS (Netherlands)

    Ronday, R.; Houx, N.W.H.

    1996-01-01

    This study assessed the suitability of seven species of soil invertebrates for toxicologically testing pesticides in water. Requirements were that the organisms must survive in water, be easy to handle, be easy to breed, be sensitive to pesticides, and show unambiguous toxicological effects. The

  3. Soil pore characteristics assessed from X-ray micro-CT derived images and correlations to soil friability

    DEFF Research Database (Denmark)

    Munkholm, Lars Juhl; Heck, R; Deen, B

    2012-01-01

    X-ray computed tomography (CT) scanning technology has, in recent decades, been shown to be a very powerful technique to visualize and quantify soil structure. The objective of this project was to quantify soilporecharacteristics, on undisturbed field moist soil, using a high resolution X-rayCT...... cores varied in porosity and porecharacteristics. A drop shatter test was used as a reference procedure to quantify soilfriability. The top 40 mm of the 80 mm high soil samples were scanned using a X-raymicro-CT scanner. The selected region of interest (36 × 36 × 36 mm) was reconstructed with a voxel...... of 49 m3 100 m− 3. The air-filled porosity, at sampling/testing, ranged between 5 and 32 m3 100 m− 3, with an average of 15 m3 100 m− 3. The porosity determined from CT imagery ranged between 1 and 31 m3 100 m− 3, with an average of 4.5 m3 100 m− 3. The number of branches, junctions and end points...

  4. Impact of S fertilizers on pore-water Cu dynamics and transformation in a contaminated paddy soil with various flooding periods.

    Science.gov (United States)

    Yang, Jianjun; Zhu, Shenhai; Zheng, Cuiqing; Sun, Lijuan; Liu, Jin; Shi, Jiyan

    2015-04-09

    Impact of S fertilization on Cu mobility and transformation in contaminated paddy soils has been little reported. In this study, we investigated the dynamics and transformation of dissolved and colloidal Cu in the pore water of a contaminated paddy soil after applying ammonium sulphate (AS) and sulfur coated urea (SCU) with various flooding periods (1, 7 and 60 days). Compared to the control soil, the AS-treated soil released more colloidal and dissolved Cu over the entire flooding period, while the SCU-treated soil had lower colloidal Cu after 7-day flooding but higher colloidal and dissolved Cu after 60-day flooding. Microscopic X-ray fluorescence (μ-XRF) analysis found a close relationship between Fe and Cu distribution on soil colloids after 60-day flooding, implying the formation of colloidal Fe/Cu sulphide coprecipitates. Cu K-edge X-ray absorption near-edge structure (XANES) spectroscopy directly revealed the transformation of outer-sphere complexed Cu(II) species to Cu(II) sulphide and reduced Cu2O in the colloids of S-treated soils after 60-day flooding. These results demonstrated the great influence of S fertilization on pore-water Cu mobility by forming Cu sulphide under flooding conditions, which facilitated our understanding and control of Cu loss in contaminated paddy soils under S fertilization. Copyright © 2015 Elsevier B.V. All rights reserved.

  5. Accounting for sub-resolution pores in models of water and solute transport in soils based on computed tomography images: Are we there yet?

    Science.gov (United States)

    Baveye, Philippe C.; Pot, Valérie; Garnier, Patricia

    2017-12-01

    In the last decade, X-ray computed tomography (CT) has become widely used to characterize the geometry and topology of the pore space of soils and natural porous media. Regardless of the resolution of CT images, a fundamental problem associated with their use, for example as a starting point in simulation efforts, is that sub-resolution pores are not detected. Over the last few years, a particular type of modeling method, known as ;Grey; or ;Partial Bounce Back; Lattice-Boltzmann (LB), has been adopted by increasing numbers of researchers to try to account for sub-resolution pores in the modeling of water and solute transport in natural porous media. In this short paper, we assess the extent to which Grey LB methods indeed offer a workable solution to the problem at hand. We conclude that, in spite of significant computational advances, a major experimental hurdle related to the evaluation of the penetrability of sub-resolution pores, is blocking the way ahead. This hurdle will need to be cleared before Grey LB can become a credible option in the microscale modeling of soils and sediments. A necessarily interdisciplinary effort, involving both modelers and experimentalists, is needed to clear the path forward.

  6. A pore water conductivity sensor

    NARCIS (Netherlands)

    Hilhorst, M.A.

    2001-01-01

    The electrical permittivity and conductivity of the bulk soil are a function of the permittivity and conductivity of the pore water. For soil water contents higher than 0.10 both functions are equal, facilitating in situ conductivity measurements of the pore water. A novel method is described, based

  7. PORE SIZE DISTRIBUTION AND SOIL HYDRO PHYSICAL PROPERTIES UNDER DIFFERENT TILLAGE PRACTICES AND COVER CROPS IN A TYPIC HAPLUSULT IN NORTHERN NIGERIA

    Directory of Open Access Journals (Sweden)

    Halima Mohammed Lawal

    2017-05-01

    Full Text Available Tillage practices influence soil physical, chemical and biological qualities which in-turn alters plant growth and crop yield. In the Northern Guinea Savanna (NGS ecological zone of Nigeria, agricultural production is mainly constrained by low soil nutrient and water holding capacity, it is therefore, imperative to develop appropriate management practices that will give optimal soil hydro-physical properties for proper plant growth, effective soil and water management and environmental conservation. This study investigated the effect of three tillage practices (no till, reduced till and conventional till and four cover crops (Centrosema pascuorum, Macrotyloma uniflorum, Cucurbita maxima and Glyine max and a bare/control (no cover crop on some soil physical properties of a Typic Haplusult during the rainy seasons of 2011, 2012 and 2013 in Samaru, NGS ecological zone of Nigeria. The field trials were laid out in a split plot arrangement with tillage practices in the main plots and cover crops in the subplots, all treatments were replicated three times. Auger and core soil samples were collected at the end of each cropping season each year in three replicates from each treatment plot at four depths (0-5, 5-10, 10-15 and 15-20 cm. Particle size distribution, bulk density, total pore volume and water retention at various soil matric potentials were determined using standard methods. Data obtained were compared with optimum values and fitted into a RETC computer code for quantifying soil hydraulic behavior and physical quality. Results showed that different tillage practices had varied effect on soil physical properties. No-till had the highest water holding capacity at most suction points evaluated, it had 4.3 % and 12.9 % more soil moisture than the reduced till  and conventionally tilled systems across all matric potentials while Centrosema pascuorum (3.1% and Cucurbita maxima (5.5% were best among evaluated cover crops in retaining soil moisture

  8. Cine-CT measurement of cortical renal blood flow

    International Nuclear Information System (INIS)

    Jaschke, W.R.; Gould, R.G.; Cogan, M.G.; Sievers, R.; Lipton, M.J.

    1987-01-01

    A modified indicator-dilution technique using radiographic contrast material and a cine-CT scanner was used to measure blood flow in the renal cortex of dogs. To validate this technique, CT measurements were correlated with simultaneous measurements of flow determined by radioactive microspheres. Measurements were taken during euvolemic conditions and after hemorrhage. Thirty-nine measurements were compared, covering a flow range from 1 to 7 ml min-1 g-1, and a good correlation was found between the cine-CT and microsphere results (r = 0.93; p less than 0.001). Additionally, cine-CT measurements were made of the mean transit time (MTT) of contrast material through the renal cortex, and the reciprocal of these MTT values was also well correlated to microsphere determined flow (r = 0.94; p less than 0.001). Thus, cine-CT appears to be a promising new technique for measuring renal blood flow

  9. Differences in the behaviour of HTO and H2O in soil after condensation from the atmosphere and conversion of HT to HTO and OBT in soil relative to moisture content and pore volume

    International Nuclear Information System (INIS)

    Bunnenberg, C.; Feinhals, J.; Wiener, B.

    1986-01-01

    Theoretical considerations and field and soil column experiments have identified the condensation of atmospheric water vapour as an additional process in the HTO contamination of soils. In contrast to wash-out, where tritium concentrations of the deposited water are the same as in the falling drops, the specific activity of the condensed water is increased compared with that of the atmospheric humidity, when the partial vapour pressure gradient of HTO between atmosphere and soil is higher than the H 2 O pressure gradient. With respect to HTO deposition, condensation may therefore be more effective per unit precipitation than wash-out. Experiments on the conversion rates of HT to HTO and OBT in soils have exhibited a pronounced dependence on moisture content and free pore volume. With rising moisture content, conversion increases due to enhanced bacterial action; while close to field capacity a decrease occurs as a result of restricted HT diffusion through the soil pores. In short-term experiments about 0.1% of the converted HT was found in the OBT form. (author)

  10. Pore pressure buildup and soil stress relaxation in monopile foundations of offshore wind converters; Porenwasserdruckaufbau und Bodenentfestigung um Pfahlgruendungen von Offshore-Windenergieanlagen

    Energy Technology Data Exchange (ETDEWEB)

    Cuellar, Pablo; Baessler, Matthias; Georgi, Steven; Ruecker, Werner [BAM Bundesanstalt fuer Materialforschung und -pruefung, Berlin (Germany). Fachbereich 7.2 Ingenieurbau

    2012-09-15

    For the installation of wind turbines in the offshore environment and their foundation in the seabed it is customary to employ large-diameter steel piles, either in monopile or multi-pile configurations (jacket, tripod, etc..). The effects of cyclic lateral loading on the offshore piles and particularly the possibility of a progressive accumulation of residual pore water pressure within the saturated embedding soil are discussed in this article. Here it is shown that this can lead to significant changes of their behaviour under external loading, which can potentially compromise the foundation's stability or serviceability. Furthermore, some of the singular effects arising during a realistic storm of moderate magnitude as well as their potential for transient damages to the foundation's stiffness are addressed in the paper. For the investigation of these phenomena the authors have employed a coupled bi-phasic analytical model of the offshore foundation. The constitutive model employed for the seabed, in the frame of the theory of Generalized Plasticity, can reproduce some complex features of cyclic soil behaviour such as the tendency for a progressive densification under cyclic loading, which is responsible for the soil liquefaction phenomena in undrained conditions. Finally, some implications and specific recommendations for the design of offshore monopiles in the frame of the limit states are provided. (orig.)

  11. Challenges of conservation agriculture practices on silty soils. Effects on soil pore and gas transport characteristics in North-eastern Italy

    DEFF Research Database (Denmark)

    Piccoli, Ilaria; Schjønning, Per; Lamandé, Mathieu

    2017-01-01

    highlighted low transmission properties of the silty soils independently from agronomic management. Both air permeability and relative gas diffusivity showed poor aerated conditions being generallytreatments affected the transmission properties only in the coarsest soil...... of this study was to evaluate the effect of CA practices on gas transport characteristics in the silty soils of the Veneto Region (North-Eastern Italy). In 2010, a field experiment comparing CA practices (no-tillage, cover crop and residues retention) to conventional intensive tillage (IT) system...... was established in four farms located in the Veneto low plain. In fall 2015, 144 undisturbed 100 cm3 soil cores where collected at two different layers (3–6.5 cm and 20–23.5 cm) and analysed for air-filled porosity, air permeability, gas diffusivity and soil structure indices derived. Gas transport measurements...

  12. Composição química da solução do solo nas diferentes classes de poro do solo Chemical composition of soil solution in different soil pore classes

    Directory of Open Access Journals (Sweden)

    Thomas Vincent Gloaguen

    2009-10-01

    Full Text Available A composição química da solução do solo pode ser considerada indicadora da presença de nutrientes ou contaminantes no solo. Para analisar a variação dessa composição nos poros do solo, utilizou-se um sistema de extração sequencial da solução do solo em diferentes classes de diâmetro de poro. Colunas de PVC foram construídas e preenchidas com terra fina seca ao ar de um Cambissolo Háplico distrófico, e irrigadas com água destilada (T1, efluente de estação de tratamento de esgoto sanitário EETE (T2 e EETE + 1,2 g L-1 CaSO4 (T3, aplicando lâminas de 150 e 300 mm. Antes da irrigação e após cada lâmina, aplicaram-se na base de cada coluna os seguintes potenciais: 0, 13,3, 26,7, 40,0 e 53,3 kPa para extração e coleta da solução do solo nas faixas de poros: Ø > 76,2 µm, 44,6 44,6 m. Todos os dados foram ajustados significativamente ao modelo linear Y = a - b.log(X, onde Y é o atributo avaliado e X o diâmetro de poro do solo. Embora a concentração de NO3-na microporosidade supere o valor limite [NO3-]lim para água doce potável (Classe 1, a baixa concentração na macroporosidade (sempre inferior a [NO3-]lim/4 limita o risco de contaminação por lixiviação. Constatou-se também que a adição de gesso promove a redução da concentração de NO3-e de Na+ no solo.The chemistry of the soil solution can be regarded as an indicator of the presence of nutrients or contaminants in the soil. To evaluate the variation of this chemical composition in the soil pores, a sequential system of extraction of the soil solution from the different soil pore classes was used. Soil columns were constructed and filled with air-dried fine soil of a Dystrophic Ultisol, and irrigated with: distilled water (T1, treated wastewater (T2 and treated wastewater + 1.2 g L-1 CaSO4 (T3 at irrigation levels of 150 and 300 mm, added progressively (without leaching. Before and after irrigation the soil solution was extracted by applying successive

  13. Quantitative dual energy CT measurements in rabbit VX2 liver tumors: Comparison to perfusion CT measurements and histopathological findings

    International Nuclear Information System (INIS)

    Zhang, Long Jiang; Wu, Shengyong; Wang, Mei; Lu, Li; Chen, Bo; Jin, Lixin; Wang, Jiandong; Larson, Andrew C.; Lu, Guang Ming

    2012-01-01

    Purpose: To evaluate the correlation between quantitative dual energy CT and perfusion CT measurements in rabbit VX2 liver tumors. Materials and methods: This study was approved by the institutional animal care and use committee at our institution. Nine rabbits with VX2 liver tumors underwent contrast-enhanced dual energy CT and perfusion CT. CT attenuation for the tumors and normal liver parenchyma and tumor-to-liver ratio were obtained at the 140 kVp, 80 kVp, average weighted images and dual energy CT iodine maps. Quantitative parameters for the viable tumor and adjacent liver were measured with perfusion CT. The correlation between the enhancement values of the tumor in iodine maps and perfusion CT parameters of each tumor was analyzed. Radiation dose from dual energy CT and perfusion CT was measured. Results: Enhancement values for the tumor were higher than that for normal liver parenchyma at the hepatic arterial phase (P < 0.05). The highest tumor-to-liver ratio was obtained in hepatic arterial phase iodine map. Hepatic blood flow of the tumor was higher than that for adjacent liver (P < 0.05). Enhancement values of hepatic tumors in the iodine maps positively correlated with permeability of capillary vessel surface (r = 0.913, P < 0.001), hepatic blood flow (r = 0.512, P = 0.010), and hepatic blood volume (r = 0.464, P = 0.022) at the hepatic arterial phases. The effective radiation dose from perfusion CT was higher than that from DECT (P < 0.001). Conclusions: The enhancement values for viable tumor tissues measured in iodine maps were well correlated to perfusion CT measurements in rabbit VX2 liver tumors. Compared with perfusion CT, dual energy CT of the liver required a lower radiation dose.

  14. CT Measured Psoas Density Predicts Outcomes After Enterocutaneous Fistula Repair

    Science.gov (United States)

    Lo, Wilson D.; Evans, David C.; Yoo, Taehwan

    2018-01-01

    Background Low muscle mass and quality are associated with poor surgical outcomes. We evaluated CT measured psoas muscle density as a marker of muscle quality and physiologic reserve, and hypothesized that it would predict outcomes after enterocutaneous fistula repair (ECF). Methods We conducted a retrospective cohort study of patients 18 – 90 years old with ECF failing non-operative management requiring elective operative repair at Ohio State University from 2005 – 2016 that received a pre-operative abdomen/pelvis CT with intravenous contrast within 3 months of their operation. Psoas Hounsfield Unit average calculation (HUAC) were measured at the L3 level. 1 year leak rate, 90 day, 1 year, and 3 year mortality, complication risk, length of stay, dependent discharge, and 30 day readmission were compared to HUAC. Results 100 patients met inclusion criteria. Patients were stratified into interquartile (IQR) ranges based on HUAC. The lowest HUAC IQR was our low muscle quality (LMQ) cutoff, and was associated with 1 year leak (OR 3.50, p < 0.01), 1 year (OR 2.95, p < 0.04) and 3 year mortality (OR 3.76, p < 0.01), complication risk (OR 14.61, p < 0.01), and dependent discharge (OR 4.07, p < 0.01) compared to non-LMQ patients. Conclusions Psoas muscle density is a significant predictor of poor outcomes in ECF repair. This readily available measure of physiologic reserve can identify patients with ECF on pre-operative evaluation that have significantly increased risk that may benefit from additional interventions and recovery time to mitigate risk before operative repair. PMID:29505144

  15. Quantitative CT measures of emphysema and airway wall thickness are related to D(L)CO

    DEFF Research Database (Denmark)

    Grydeland, Thomas B; Thorsen, Einar; Dirksen, Asger

    2011-01-01

    There is limited knowledge on the relationship between diffusing capacity of the lung for carbon monoxide (D(L)CO) and quantitative computed tomography (CT) measures of emphysema and airway wall thickness.......There is limited knowledge on the relationship between diffusing capacity of the lung for carbon monoxide (D(L)CO) and quantitative computed tomography (CT) measures of emphysema and airway wall thickness....

  16. Gas transport and subsoil pore characteristics

    DEFF Research Database (Denmark)

    Berisso, Feto Esimo; Schjønning, Per; Keller, Thomas

    2013-01-01

    Arrangements of elementary soil particles during soil deposition and subsequent biological and physical processes in long-term pedogenesis are expected to lead to anisotropy of the non-tilled subsoil pore system. Soil compaction by agricultural machinery is known to affect soil pore characteristics...... were sampled in vertical and horizontal directions from 0.3, 0.5, 0.7 and 0.9 m depth (the two lower depths only in Sweden). In the laboratory, water retention, air permeability (ka) and gas diffusivity (Ds/D0) were determined. For the sandy clay loam, morphological characteristics of pores (effective......). In the sandy clay loam soil, dB and nB displayed significant anisotropy (FAcharacteristics because of its origin...

  17. Optical properties and bioavailability of dissolved organic matter along a flow-path continuum from soil pore waters to the Kolyma River, Siberia

    Science.gov (United States)

    Frey, K. E.; Sobczak, W. V.; Mann, P. J.; Holmes, R. M.

    2015-08-01

    The Kolyma River in Northeast Siberia is among the six largest arctic rivers and drains a region underlain by vast deposits of Holocene-aged peat and Pleistocene-aged loess known as yedoma, most of which is currently stored in ice-rich permafrost throughout the region. These peat and yedoma deposits are important sources of dissolved organic matter (DOM) to inland waters that in turn play a significant role in the transport and ultimate remineralization of organic carbon to CO2 and CH4 along the terrestrial flow-path continuum. The turnover and fate of terrigenous DOM during offshore transport will largely depend upon the composition and amount of carbon released to inland and coastal waters. Here, we measured the optical properties of chromophoric DOM (CDOM) from a geographically extensive collection of waters spanning soil pore waters, streams, rivers, and the Kolyma River mainstem throughout a ∼ 250 km transect of the northern Kolyma River basin. During the period of study, CDOM absorbance values were found to be robust proxies for the concentration of DOM, whereas additional CDOM parameters such as spectral slopes (S) were found to be useful indicators of DOM quality along the flow-path. In particular, CDOM absorption at 254 nm showed a strong relationship with dissolved organic carbon (DOC) concentrations across all water types (r2 = 0.958, p CDOM demonstrated statistically significant differences between all four water types and tracked changes in the concentration of bioavailable DOC, suggesting that this parameter may be suitable for clearly discriminating shifts in organic matter characteristics among water types along the full flow-path continuum across this landscape. The heterogeneity of environmental characteristics and extensive continuous permafrost of the Kolyma River basin combine to make this a critical region to investigate and monitor. With ongoing and future permafrost degradation, peat and yedoma deposits throughout the Northeast Siberian

  18. Optical properties and bioavailability of dissolved organic matter along a flow-path continuum from soil pore waters to the Kolyma River mainstem, East Siberia

    Science.gov (United States)

    Frey, Karen E.; Sobczak, William V.; Mann, Paul J.; Holmes, Robert M.

    2016-04-01

    The Kolyma River in northeast Siberia is among the six largest Arctic rivers and drains a region underlain by vast deposits of Holocene-aged peat and Pleistocene-aged loess known as yedoma, most of which is currently stored in ice-rich permafrost throughout the region. These peat and yedoma deposits are important sources of dissolved organic matter (DOM) to inland waters that in turn play a significant role in the transport and ultimate remineralization of organic carbon to CO2 and CH4 along the terrestrial flow-path continuum. The turnover and fate of terrigenous DOM during offshore transport largely depends upon the composition and amount of carbon released to inland and coastal waters. Here, we measured the ultraviolet-visible optical properties of chromophoric DOM (CDOM) from a geographically extensive collection of waters spanning soil pore waters, streams, rivers, and the Kolyma River mainstem throughout a ˜ 250 km transect of the northern Kolyma River basin. During the period of study, CDOM absorption coefficients were found to be robust proxies for the concentration of DOM, whereas additional CDOM parameters such as spectral slopes (S) were found to be useful indicators of DOM quality along the flow path. In particular, the spectral slope ratio (SR) of CDOM demonstrated statistically significant differences between all four water types and tracked changes in the concentration of bioavailable DOC, suggesting that this parameter may be suitable for clearly discriminating shifts in organic matter characteristics among water types along the full flow-path continuum across this landscape. However, despite our observations of downstream shifts in DOM composition, we found a relatively constant proportion of DOC that was bioavailable ( ˜ 3-6 % of total DOC) regardless of relative water residence time along the flow path. This may be a consequence of two potential scenarios allowing for continual processing of organic material within the system, namely (a

  19. Improved isolation of cadmium from paddy soil by novel technology based on pore water drainage with graphite-contained electro-kinetic geosynthetics.

    Science.gov (United States)

    Tang, Xianqiang; Li, Qingyun; Wang, Zhenhua; Hu, Yanping; Hu, Yuan; Scholz, Miklas

    2018-03-10

    Novel soil remediation equipment based on electro-kinetic geosynthetics (EKG) was developed for in situ isolation of metals from paddy soil. Two mutually independent field plot experiments A and B (with and without electric current applied) were conducted. After saturation using ferric chloride (FeCl 3 ) and calcium chloride (CaCl 2 ), soil water drainage capacity, soil cadmium (Cd) removal performance, energy consumption as well as soil residual of iron (Fe) and chloride (Cl) were assessed. Cadmium dissolved in the soil matrix and resulted in a 100% increase of diethylenetriamine-pentaacetic acid (DTPA) extracted phyto-available Cd. The total soil Cd content reductions were 15.20% and 26.58% for groups A and B, respectively, and electric field applications resulted in a 74.87% increase of soil total Cd removal. The electric energy consumption was only 2.17 kWh/m 3 for group B. Drainage by gravity contributed to > 90% of the overall soil dewatering capacity. Compared to conventional electro-kinetic technology, excellent and fast soil water drainage resulted in negligible hydrogen ion (H + ) and hydroxide ion (OH - ) accumulation at nearby electrode zones, which addressed the challenge of anode corrosion and cathode precipitation of soil metals. External addition of FeCl 3 and CaCl 2 caused soil Fe and Cl residuals and led to 4.33-7.59% and 139-172% acceptable augments in soil total Fe and Cl content, correspondingly, if compared to original untreated soils. Therefore, the novel soil remediation equipment developed based on EKG can be regarded as a promising new in situ technology for thoroughly isolating metals from large-scale paddy soil fields.

  20. Visualization of enzyme activities inside earthworm pores

    Science.gov (United States)

    Hoang, Duyen; Razavi, Bahar S.

    2015-04-01

    In extremely dynamic microhabitats as bio-pores made by earthworm, the in situ enzyme activities are assumed as a footprint of complex biotic interactions. Our study focused on the effect of earthworm on the enzyme activities inside bio-pores and visualizing the differences between bio-pores and earthworm-free soil by zymography technique (Spohn and Kuzyakov, 2013). For the first time, we aimed at quantitative imaging of enzyme activities in bio-pores. Lumbricus terrestris L. was placed into transparent box (15×20×15cm). After two weeks when bio-pore systems were formed by earthworms, we visualized in situ enzyme activities of five hydrolytic enzymes (β-glucosidase, cellobiohydrolase, chitinase, xylanase, leucine-aminopeptidase, and phosphatase. Zymography showed higher activity of β-glucosidase, chitinase, xylanase and phosphatase in biopores comparing to bulk soil. However, the differences in activity of cellobiohydrolase and leucine aminopeptidase between bio-pore and bulk soil were less pronounced. This demonstrated an applicability of zymography approach to monitor and to distinguish the in situ activity of hydrolytic enzymes in soil biopores.

  1. Atributos físicos do solo sob diferentes preparos e coberturas influenciados pela distribuição de poros Soil physical attributes under different tillage systems and cover crops, as influenced by pore distribution

    Directory of Open Access Journals (Sweden)

    Eurâimi de Q. Cunha

    2010-11-01

    Full Text Available Com este trabalho se propõe avaliar a influência da distribuição de poros sobre alguns atributos físicos do solo sob semeadura direta (SD e preparo convencional (PC, cultivado com diferentes culturas de cobertura, no sistema de produção orgânica de feijão e milho. O trabalho foi conduzido em Santo Antônio de Goiás, GO, em Latossolo Vermelho distrófico. Em novembro de 2003 foram instalados quatro experimentos, dois em SD e dois em PC, um em cada manejo com feijão e o outro com milho. Foram comparados em blocos ao acaso com quatro repetições, crotalária, guandu, mucuna-preta, sorgo e pousio. Amostragens de solo das parcelas e de uma mata próxima foram realizadas nas profundidades de 0-0,10 e 0,10-0,20 m, em novembro de 2007, para determinação do teor de matéria orgânica (M.O. e de atributos físicos do solo. O uso do solo sob vegetação de cerrado para a produção agrícola, independentemente do sistema de cultivo, resultou em redução na porosidade total (Pt, macroporosidade (Mp e capacidade de aeração do solo (CAS. Os atributos físicos do solo foram afetados favoravelmente pela M.O. As variações em Pt, Mp, CAS e capacidade de água disponível do solo podem ser explicadas pela variação na distribuição do tamanho de poros do solo, principalmente daqueles com ∅ > 0,075 mm.This study aimed to evaluate the influence of pore distribution on some physical attributes of soil under no-tillage (NT and conventional tillage (CT systems, cultivated with different cover crops, in organic production of common bean and corn. The work was carried out in Santo Antônio de Goiás, GO, on an Oxisol. In November 2003 four experiments were installed, two of them under NT and the other two under CT. In each soil tillage system, an experiment was conducted with corn and another with common bean. Sunn hemp, pigeon pea, velvet bean, sorghum, and fallow were compared in a randomized block design, with four replications. Samples were

  2. Recent Progress Validating the HADES Model of LLNL's HEAF MicroCT Measurements

    Energy Technology Data Exchange (ETDEWEB)

    White, W. T. [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Bond, K. C. [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Lennox, K. P. [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Aufderheide, M. B. [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Seetho, I. M. [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Roberson, G. P. [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States)

    2014-07-17

    This report compares recent HADES calculations of x-ray linear attenuation coefficients to previous MicroCT measurements made at Lawrence Livermore National Laboratory’s High Energy Applications Facility (HEAF). The chief objective is to investigate what impact recent changes in HADES modeling have on validation results. We find that these changes have no obvious effect on the overall accuracy of the model. Detailed comparisons between recent and previous results are presented.

  3. The influence of pore-fluid in the soil on ground vibrations from a tunnel embedded in a layered half-space

    Science.gov (United States)

    Yuan, Zonghao; Cao, Zhigang; Boström, Anders; Cai, Yuanqiang

    2018-04-01

    A computationally efficient semi-analytical solution for ground-borne vibrations from underground railways is proposed and used to investigate the influence of hydraulic boundary conditions at the scattering surfaces and the moving ground water table on ground vibrations. The arrangement of a dry soil layer with varying thickness resting on a saturated poroelastic half-space, which includes a circular tunnel subject to a harmonic load at the tunnel invert, creates the scenario of a moving water table for research purposes in this paper. The tunnel is modelled as a hollow cylinder, which is made of viscoelastic material and buried in the half-space below the ground water table. The wave field in the dry soil layer consists of up-going and down-going waves while the wave field in the tunnel wall consists of outgoing and regular cylindrical waves. The complete solution for the saturated half-space with a cylindrical hole is composed of down-going plane waves and outgoing cylindrical waves. By adopting traction-free boundary conditions on the ground surface and continuity conditions at the interfaces of the two soil layers and of the tunnel and the surrounding soil, a set of algebraic equations can be obtained and solved in the transformed domain. Numerical results show that the moving ground water table can cause an uncertainty of up to 20 dB for surface vibrations.

  4. Effect of soil texture, tailwater height, and pore-water pressure on the morphodynamics of migrating headcuts in upland concentrated flows

    Science.gov (United States)

    Rill and gully erosion in upland and agricultural areas can result in significant soil degradation worldwide, and headcuts are the primary mechanism by which this landscape dissection occurs. Experiments were conducted to further examine the morphodynamic behavior of actively migrating headcuts in u...

  5. Pore size distribution in soils irrigated with sodic water and wastewater Distribuição de poros em solos irrigados com água salina e com água residuária

    Directory of Open Access Journals (Sweden)

    Roberta Alessandra Bruschi Gonçalves

    2010-06-01

    Full Text Available Soil porosity, especially pore size distribution, is an important controlling factor for soil infiltration, hydraulic conductivity, and water retention. This study aimed to verify the effect of secondary-treated domestic wastewater (STW on the porosity of a sandy loam Oxisol in the city of Lins, state of São Paulo, Brazil. The two-year experiment was divided into three plots: soil cultivated with corn and sunflower and irrigated with STW, soil cultivated and irrigated with sodic groundwater, and non-irrigated and non-cultivated soil (control. At the end of the experiment, undisturbed core samples were sampled from 0 to 2.0 m (8 depths. The water retention curves were obtained by tension plates and Richard's pressure plate apparatus, and the pore size distribution inferred from the retention curves. It was found that irrigation with treated wastewater and treated groundwater led to a decrease in microporosity (V MI, defined as the pore class ranging from 0.2 to 50 μm diameter. On the other hand, a significant increase in cryptoporosity (V CRI (A porosidade do solo, principalmente a distribuição dos poros, é um fator importante que controla a infiltração de água, condutividade hidráulica e retenção da água no solo. Este estudo teve como objetivo verificar os efeitos do efluente de estação de tratamento de esgoto (TSE na porosidade de um Latossolo de textura média. A área experimental foi dividida em três parcelas: solo cultivado com milho e girassol e irrigado com TSE (STW; solo cultivado e irrigado com água subterrânea sódica (W; e solo não cultivado e não irrigado (C-controle. No final de dois anos de experimento, amostras não deformadas de solo foram coletadas de 0 a 2,0 m (oito amostras. As curvas de retenção de água no solo foram obtidas com mesas de tensão e câmara de Richards, e a distribuição de poros no solo foi calculada a partir da derivação dessas curvas. Foi observado decréscimo da microporosidade V MI

  6. The impact of different flooding periods on the dynamics of pore water concentrations of As, Cr, Mo and V in a contaminated floodplain soil - results of a lysimeter study

    Science.gov (United States)

    Rupp, Holger; Meissner, Ralph; Shaheen, Sabry; Rinklebe, Jörg

    2014-05-01

    Trace elements and arsenic (As) were transported with water during inundation in floodplain ecosystems, where they settled down and accumulated predominantly in depressions and low-lying terraces. Highly variable hydrological conditions in floodplains can affect the dynamics of pollutants. The impact of different flooding/drying periods on the temporal dynamics of pore water concentrations of As, Cr, Mo and V as a function of soil EH/pH changes and dynamics of DOC, Fe, Mn and SO42- was studied in a contaminated floodplain soil collected at the Elbe River (Germany). A specific groundwater lysimeter technique with two separate small lysimeter vessels served as replicates was used for this study. The groundwater level inside the lysimeters was controlled to simulate long term and short term flooding/drying. The long term (LT) flooding scenario consists of 94 days of flooding followed by similar drying term. The short term (ST) flooding/drying scenario comprises 21 days and was six times repeated. The entire experimental period (LT_ST) was about 450 days. Flooding of the soil caused a significant decrease of EH and pH. Concentrations of soluble As, Cr, Fe, Mn, Mo and DOC were higher under reducing conditions than under oxidizing conditions in LT. However, As and Cr tended to be mobilized under oxidizing conditions during ST, which might be due to slow kinetics of the redox reaction of As and Cr. Dynamics of Mo were more affected by changes of EH/pH as compared to As, Cr and V and governed mainly by Fe-Mn chemistry. Concentrations of V in ST were higher than in LT and were controlled particularly by pH and chemistry of Fe. The interactions between the elements and carriers studied were stronger during long flood-dry-cycles than during short cycles, which confirmed our hypothesis. We conclude that the dynamics of As, Cr, Mo and V are determined by the length of time soils are exposed to flooding, because drivers of element mobility need a certain time to provoke

  7. Porous media fluid transport and pore structure

    CERN Document Server

    Dullien, F A L

    1992-01-01

    This book examines the relationship between transport properties and pore structure of porous material. Models of pore structure are presented with a discussion of how such models can be used to predict the transport properties of porous media. Portions of the book are devoted to interpretations of experimental results in this area and directions for future research. Practical applications are given where applicable, and are expected to be useful for a large number of different fields, including reservoir engineering, geology, hydrogeology, soil science, chemical process engineering, biomedica

  8. Soils

    Science.gov (United States)

    Emily Moghaddas; Ken Hubbert

    2014-01-01

    When managing for resilient forests, each soil’s inherent capacity to resist and recover from changes in soil function should be evaluated relative to the anticipated extent and duration of soil disturbance. Application of several key principles will help ensure healthy, resilient soils: (1) minimize physical disturbance using guidelines tailored to specific soil types...

  9. The value of pulmonary vessel CT measuring and calculating of relative ratio

    International Nuclear Information System (INIS)

    Ji Jiansong; Xu Xiaoxiong; Lv Suzhen; Zhao Zhongwei; Wang Zufei; Xu Min; Gong Jianping

    2004-01-01

    Objective: To evaluate value of CT measurement and calculation of vessels of isolate pig lung, by compare with measurement and calculation of resin cast of them. Methods: CT scanned and measured the four isolated pig lung which vessels were full with ABS liquid or self-solidification resin liquid, and calculate the relative ratio of superior/inferior order and vein/artery of same order. After resin cast were made, measure and calculate the same as CT did. Results: Second order of calculation of vein/artery of same order by the two method had statistic difference (P 0.05). Conclusion: CT has high value in calculation of the relative ratio of superior/inferior order

  10. Stable xenon CT measurement of cerebral blood flow in cardiac transplantation candidates: Correlation with cognitive function

    International Nuclear Information System (INIS)

    Bello, J.A.; Fink, M.E.; Hilal, S.K.; Rose, E.A.; Reemtsma, K.

    1987-01-01

    Thirteen consecutive unselected patients with NYHA class 4 cardiac failure referred for cardiac transplantation underwent neurologic examination and cerebral blood flow measurement (rCBF) using the stable xenon enhanced CT method on a GE9800 system. Eleven men and two women were studied (mean age = 43.8 +- 6.1). On neurological examination, six of the patients demonstrated normal mental function; the remaining seven patients demonstrated memory, language, or learning impairment. There was no difference in mean cardiac output between the groups (4.9 L/min +- 1.68 vs. 4.2L/min +- 1.57). rCBF was significantly reduced in the impaired group. Cognitive impairment in patients with cardiac failure can be correlated with cerebral ischemia. Stable xenon CT measurement of rCBF in transplant candidates may help identify patients requiring more rapid transplantation to prevent permanent cerebral injury

  11. A proposal of a three-dimensional CT measurement method of maxillofacial structure

    International Nuclear Information System (INIS)

    Tanaka, Ray; Hayashi, Takafumi

    2007-01-01

    Three-dimensional CT measurement is put in practice in order to grasp the pathological condition on diseases such as the temporomandibular joint disorder, maxillofacial anomaly, jaw deformity, or fracture which cause the morphologic changes of the maxillofacial bones. On the 3D measurement, the unique system that is obtained by volume rendering 3D images with a simultaneous reference of axial images combined with coronal and sagittal multi-planar reconstruction (MPR) images (we call this MPR referential method), is employed in order to define the measurement points. Our purpose in this report is to indicate the usefulness of this unique method by comparing with the common way to define the measurement points on only 3D reconstruction images without consulting of MPR images. Clinical CT data obtained from a male patient with skeletal malocclusion was used. Contiguous axial images were reconstructed at 4 times magnification, with a reconstruction interval of 0.5 mm, focused on the temporomandibular joint region in his left side. After these images were converted to Digital Imaging and Communications in Medicine (DICOM) format and sent to personal computer (PC), 3D reconstruction image was created using free 3D DICOM medical image viewer. The coordinates of 3 measurement points (the lateral and medial pole of the mandibular condyle, and the left foramen ovale) were defined with MPR images (MPR coordinates) as reference coordinates, and then the coordinates that were defined on only 3D reconstruction image without consulting to MPR images (3D coordinates) were compared to those of MPR coordinates. Three examiners were engaged independently 10 times for every measurement point. In our result, there was no correspondence between 3D coordinates and MPR coordinates, and contribution of 3D coordinates showed a variety in every measurement point and in every observer. We deemed that ''MPR referential method'' is useful to assess the location of the target point of anatomical

  12. Sagittal-lung CT measurements in the evaluation of asthma-COPD overlap syndrome: a distinctive phenotype from COPD alone.

    Science.gov (United States)

    Qu, Yanjuan; Cao, Yiyuan; Liao, Meiyan; Lu, Zhiyan

    2017-07-01

    This study aimed at investigating the capability of sagittal-lung computed tomography (CT) measurements in differentiating chronic obstructive pulmonary disease (COPD) and asthma-COPD overlap syndrome (ACOS). Clinical and high-resolution CT of 229 patients including 123 pure COPD patients and 106 ACOS patients were included. Sagittal-lung CT measurements in terms of bilateral lung height (LH), anterior-posterior lung diameter (APLD), diaphragm height (DH), and anterior sterno-diaphragmatic angle (ASDA), as well as inter-pulmonary septum length (IPSL) on axial images were measured both before and after bronchodilator (BD) administration. Comparisons of clinical characteristics and CT measurements between patient groups were performed. All pre-BD quantitative sagittal features measuring diaphragm flattening and hyperinflation were not significantly different between patients with COPD and patients with ACOS (P values all >0.05). Following BD administration, the ACOS patients exhibited lower left LH, bilateral APLD, and bilateral ASDA, but higher right DH, compared to pure COPD patients (P values all <0.05). Right LH, left DH and IPSL were not significantly different between patient groups. Besides, variations of all sagittal-lung CT measurements were significantly larger in patients with ACOS than in patients with pure COPD (P values all <0.001) and showed high performance in differentiating these two kinds of patient, with diagnostic sensitivities ranging from 76.4 to 97.2%, specificities ranging from 86.2 to 100.0%, and accuracies ranging from 80.9 to 90.7%. Sagittal-lung CT measurements allow for differentiating patients with ACOS from those with pure COPD. The ACOS patients had larger post-BD variations of sagittal-lung CT measurements than patients with pure COPD.

  13. The pore space scramble

    Science.gov (United States)

    Gormally, Alexandra; Bentham, Michelle; Vermeylen, Saskia; Markusson, Nils

    2015-04-01

    Climate change and energy security continue to be the context of the transition to a secure, affordable and low carbon energy future, both in the UK and beyond. This is reflected in for example, binding climate policy targets at the EU level, the introduction of renewable energy targets, and has also led to an increasing interest in Carbon Capture and Storage (CCS) technology with its potential to help mitigate against the effects of CO2 emissions from fossil fuel burning. The UK has proposed a three phase strategy to integrate CCS into its energy system in the long term focussing on off-shore subsurface storage (DECC, 2014). The potential of CCS therefore, raises a number of challenging questions and issues surrounding the long-term storage of CO2 captured and injected into underground spaces and, alongside other novel uses of the subsurface, contributes to opening a new field for discussion on the governance of the subsurface. Such 'novel' uses of the subsurface have lead to it becoming an increasingly contested space in terms of its governance, with issues emerging around the role of ownership, liability and property rights of subsurface pore space. For instance, questions over the legal ownership of pore space have arisen with ambiguity over the legal standpoint of the surface owner and those wanting to utilise the pore space for gas storage, and suggestions of whether there are depths at which legal 'ownership' becomes obsolete (Barton, 2014). Here we propose to discuss this 'pore space scramble' and provide examples of the competing trajectories of different stakeholders, particularly in the off-shore context given its priority in the UK. We also propose to highlight the current ambiguity around property law of pore space in the UK with reference to approaches currently taken in different national contexts. Ultimately we delineate contrasting models of governance to illustrate the choices we face and consider the ethics of these models for the common good

  14. Variability of vascular CT measurement techniques used in the assessment abdominal aortic aneurysms

    International Nuclear Information System (INIS)

    England, Andrew; Niker, Amanda; Redmond, Claire

    2010-01-01

    Purpose: The aim of this project is to assess the variability of six CT measurement techniques for sizing abdominal aortic aneurysms (AAAs). Method: 37 CT scans with known AAAs were loaded on to a departmental picture archiving and communication system (PACS). A team of three observers, with experience in aortic CT measurements and the PACS performed a series of 2D and 3D measurements on the abdominal aorta. Each observer was asked to measure 3 quantities; anterior-posterior AAA diameter, maximum oblique AAA diameter, maximum aneurysm area using both 2D and 3D techniques. In order to test intra-observer variability each observer was asked to repeat their measurements. All measurements were taken using electronic callipers, under standardised viewing conditions using previously calibrated equipment. 3D measurements were conducted using a computer generated central luminal line (CLL). All measurements for this group were taken perpendicular to the CLL. Results: A total of 972 independent measurements were recorded by three observers. Mean intra-observer variability was lower for 2D diameter measurements (AP 1.3 ± 1.6 mm; 2D Oblique 1.2 ± 1.3 mm) and 2D areas (0.7 ± 1.3 cm 2 ) when compared to inter-observer variability (AP 1.7 ± 1.9 mm; Oblique 1.6 ± 1.7 mm; area 1.1 ± 1.5 cm 2 ). When comparing 2D with 3D measurements, differences were comparable except for 3D AP diameter and area which had lower inter-observer variability than their 2D counterparts (AP 2D 1.7 ± 1.9 mm, 3D 1.3 ± 1.3 mm; area 2D 1.1 ± 1.5 cm 2 , 3D 0.7 ± 0.7 cm 2 ). 3D area measurement was the only technique which had equal variability for intra- and inter-observer measurements. Overall observer variability for the study was good with 94-100% of all paired measurements within 5.00 mm/cm 2 or less. Using Pitman's test it can be confirmed that area measurements in the 3D plane have the least variability (r = 0.031) and 3D oblique measurements have the highest variability (r = 0

  15. Sparse signal reconstruction from polychromatic X-ray CT measurements via mass attenuation discretization

    International Nuclear Information System (INIS)

    Gu, Renliang; Dogandžić, Aleksandar

    2014-01-01

    We propose a method for reconstructing sparse images from polychromatic x-ray computed tomography (ct) measurements via mass attenuation coefficient discretization. The material of the inspected object and the incident spectrum are assumed to be unknown. We rewrite the Lambert-Beer’s law in terms of integral expressions of mass attenuation and discretize the resulting integrals. We then present a penalized constrained least-squares optimization approach for reconstructing the underlying object from log-domain measurements, where an active set approach is employed to estimate incident energy density parameters and the nonnegativity and sparsity of the image density map are imposed using negative-energy and smooth ℓ 1 -norm penalty terms. We propose a two-step scheme for refining the mass attenuation discretization grid by using higher sampling rate over the range with higher photon energy, and eliminating the discretization points that have little effect on accuracy of the forward projection model. This refinement allows us to successfully handle the characteristic lines (Dirac impulses) in the incident energy density spectrum. We compare the proposed method with the standard filtered backprojection, which ignores the polychromatic nature of the measurements and sparsity of the image density map. Numerical simulations using both realistic simulated and real x-ray ct data are presented

  16. Optimal Pile Arrangement for Minimizing Excess Pore Water Pressure Build-Up

    DEFF Research Database (Denmark)

    Barari, Amin; Saadati, Meysam; Ibsen, Lars Bo

    2013-01-01

    Numerical analysis of pile group in a liquefiable soil was considered to investigate the influence of pile spacing on excess pore pressure distribution and liquefaction potential. The analysis is conducted using a two-dimensional plain strain finite difference program considering a nonlinear...... constitutive model for sandy soil, strength and stiffness reduction, and pile-soil interaction. The Mohr-Coulomb constitutive model coupled with Byrne pore pressure build-up model have been employed in the analysis. Numerical analysis results show that pile groups have significant influence on the dynamic...... response of sandy soil as they reduce the amount of excess pore pressure development during seismic shaking and may even prevent liquefaction....

  17. Fines Classification Based on Sensitivity to Pore-Fluid Chemistry

    KAUST Repository

    Jang, Junbong

    2015-12-28

    The 75-μm particle size is used to discriminate between fine and coarse grains. Further analysis of fine grains is typically based on the plasticity chart. Whereas pore-fluid-chemistry-dependent soil response is a salient and distinguishing characteristic of fine grains, pore-fluid chemistry is not addressed in current classification systems. Liquid limits obtained with electrically contrasting pore fluids (deionized water, 2-M NaCl brine, and kerosene) are combined to define the soil "electrical sensitivity." Liquid limit and electrical sensitivity can be effectively used to classify fine grains according to their fluid-soil response into no-, low-, intermediate-, or high-plasticity fine grains of low, intermediate, or high electrical sensitivity. The proposed methodology benefits from the accumulated experience with liquid limit in the field and addresses the needs of a broader range of geotechnical engineering problems. © ASCE.

  18. Fines classification based on sensitivity to pore-fluid chemistry

    Science.gov (United States)

    Jang, Junbong; Santamarina, J. Carlos

    2016-01-01

    The 75-μm particle size is used to discriminate between fine and coarse grains. Further analysis of fine grains is typically based on the plasticity chart. Whereas pore-fluid-chemistry-dependent soil response is a salient and distinguishing characteristic of fine grains, pore-fluid chemistry is not addressed in current classification systems. Liquid limits obtained with electrically contrasting pore fluids (deionized water, 2-M NaCl brine, and kerosene) are combined to define the soil “electrical sensitivity.” Liquid limit and electrical sensitivity can be effectively used to classify fine grains according to their fluid-soil response into no-, low-, intermediate-, or high-plasticity fine grains of low, intermediate, or high electrical sensitivity. The proposed methodology benefits from the accumulated experience with liquid limit in the field and addresses the needs of a broader range of geotechnical engineering problems.

  19. Relationship between the thickness of the renal cortex and age: study with CT measurement

    International Nuclear Information System (INIS)

    Xu Yufeng; Tang Guangjian

    2004-01-01

    Objective: To study the relationship between the renal cortical thickness and age, and to establish the range of the normal renal cortex thickness by using CT measurement in different age groups so as to obtain a best age-related and practicable method for clinical measurement. Methods: (1) the accuracy of measuring renal cortical thickness by CT was evaluated: 18 kidney resected due to renal neoplasm were studied and the cortical thickness of the normal part of these specimens was assessed. The difference between the renal cortical thickness of specimens and preoperative measurements of renal cortex of the same patient by contrast enhanced CT was analyzed statistically. (2) 120 patients without history of renal disease or long term usage of potentially renal toxic drugs or history of hypertension were examined by CT with indication (s) other than renal disease. All the patients were divided into 20-40, 41-60, and 61-80 year-old groups. The renal cortical and parenchymal thickness and renal size were measured in three CT sections. The difference of the measurements among the three groups and their relationship to age was analyzed statistically. Results: There was no significant difference between the renal cortical thickness measured by enhanced spiral CT and measured in renal specimens (t=0.80, P=0.43). The renal cortical thickness in three groups was 0.73 cm, 0.65 cm, and 0.53 cm, respectively, and the differences among the three groups were significant (F=93.430, P 0.05). Conclusion: The measurement of the renal cortical thickness with enhanced spiral CT was reliable and was a sensitive method in investigating the morphologic changes of the kidney. The renal cortical thickness of normal kidney diminishes with age, but the change of the ratio of thickness of renal cortex to renal parenchyma with age was not significant

  20. Soil

    International Nuclear Information System (INIS)

    Freudenschuss, A.; Huber, S.; Riss, A.; Schwarz, S.; Tulipan, M.

    2002-01-01

    Environmental soil surveys in each province of Austria have been performed, soils of about 5,000 sites were described and analyzed for nutrients and pollutants, the majority of these data are recorded in the soil information system of Austria (BORIS) soil database, http://www.ubavie.gv.at/umweltsituation/boden/boris), which also contains a soil map of Austria, data from 30 specific investigations mainly in areas with industry and results from the Austria - wide cesium investigation. With respect to the environmental state of soils a short discussion is given, including two geographical charts, one showing which sites have soil data (2001) and the other the cadmium distribution in top soils according land use (forest, grassland, arable land, others). Information related to the soil erosion, Corine land cover (Europe-wide land cover database), evaluation of pollutants in soils (reference values of As, Cd, Co, Cr, Cu, Hg, Mo, Ni, Se, Pb, Tl, Va, Zn, AOX, PAH, PCB, PCDD/pcdf, dioxin), and relevant Austrian and European standards and regulations is provided. Figs. 2, Tables 4. (nevyjel)

  1. Soils

    International Nuclear Information System (INIS)

    Freudenschuss, A.; Huber, S.; Riss, A.; Schwarz, S.; Tulipan, M.

    2001-01-01

    For Austria there exists a comprehensive soil data collection, integrated in a GIS (geographical information system). The content values of pollutants (cadmium, mercury, lead, copper, mercury, radio-cesium) are given in geographical charts and in tables by regions and by type of soil (forests, agriculture, greenland, others) for the whole area of Austria. Erosion effects are studied for the Austrian region. Legal regulations and measures for an effective soil protection, reduction of soil degradation and sustainable development in Austria and the European Union are discussed. (a.n.)

  2. Unstable Pore-Water Flow in Intertidal Wetlands

    Science.gov (United States)

    Barry, D. A.; Shen, C.; Li, L.

    2014-12-01

    Salt marshes are important intertidal wetlands strongly influenced by interactions between surface water and groundwater. Bordered by coastal water, the marsh system undergoes cycles of inundation and exposure driven by the tide. This leads to dynamic, complex pore-water flow and solute transport in the marsh soil. Pore-water circulations occur over vastly different spatial and temporal scales with strong link to the marsh topography. These circulations control solute transport between the marsh soil and the tidal creek, and ultimately affect the overall nutrient exchange between the marsh and coastal water. The pore-water flows also dictate the soil condition, particularly aeration, which influences the marsh plant growth. Numerous studies have been carried out to examine the pore-water flow process in the marsh soil driven by tides, focusing on stable flow with the assumption of homogeneity in soil and fluid properties. This assumption, however, is questionable given the actual inhomogeneous conditions in the field. For example, the salinity of surface water in the tidal creek varies temporally and spatially due to the influence of rainfall and evapotranspiration as well as the freshwater input from upland areas to the estuary, creating density gradients across the marsh surface and within the marsh soil. Many marshes possess soil stratigraphy with low-permeability mud typically overlying high-permeability sandy deposits. Macropores such as crab burrows are commonly distributed in salt marsh sediments. All these conditions are prone to the development of non-uniform, unstable preferential pore-water flow in the marsh soil, for example, funnelling and fingering. Here we present results from laboratory experiments and numerical simulations to explore such unstable flow. In particular, the analysis aims to address how the unstable flow modifies patterns of local pore-water movement and solute transport, as well as the overall exchange between the marsh soil and

  3. X-ray CT analysis of pore structure in sand

    Science.gov (United States)

    Mukunoki, Toshifumi; Miyata, Yoshihisa; Mikami, Kazuaki; Shiota, Erika

    2016-06-01

    The development of microfocused X-ray computed tomography (CT) devices enables digital imaging analysis at the pore scale. The applications of these devices are diverse in soil mechanics, geotechnical and geoenvironmental engineering, petroleum engineering, and agricultural engineering. In particular, the imaging of the pore space in porous media has contributed to numerical simulations for single-phase and multiphase flows or contaminant transport through the pore structure as three-dimensional image data. These obtained results are affected by the pore diameter; therefore, it is necessary to verify the image preprocessing for the image analysis and to validate the pore diameters obtained from the CT image data. Moreover, it is meaningful to produce the physical parameters in a representative element volume (REV) and significant to define the dimension of the REV. This paper describes the underlying method of image processing and analysis and discusses the physical properties of Toyoura sand for the verification of the image analysis based on the definition of the REV. On the basis of the obtained verification results, a pore-diameter analysis can be conducted and validated by a comparison with the experimental work and image analysis. The pore diameter is deduced from Young-Laplace's law and a water retention test for the drainage process. The results from previous study and perforated-pore diameter originally proposed in this study, called the voxel-percolation method (VPM), are compared in this paper. In addition, the limitations of the REV, the definition of the pore diameter, and the effectiveness of the VPM for an assessment of the pore diameter are discussed.

  4. Effect of rainfall infiltration into unsaturated soil using soil column

    Science.gov (United States)

    Ibrahim, A.; Mukhlisin, M.; Jaafar, O.

    2018-02-01

    Rainfall especially in tropical region caused infiltration to the soil slope. The infiltration may change pore water pressure or matric suction of the soil. The event of rainfall infiltration into soil is a complex mechanism. Therefore, the main objectives of this research paper is to study the influence of rainfall intensity and duration that changed pore water pressure to soil. There are two types of soils used in this study; forest soil and kaolin. Soil column apparatus is used for experiments. Rainfall were applied to the soil and result for 3, 6, 12, 24, 72, 120 and 168 hours were retrieved. Result shows that for the both types of soil, the negative pore water pressures were increased during wetting process and gradually decreased towards drying process. The results also show that pore water pressure at top part was increased greatly as the wetting process started compared to the middle and bottom part of the column.

  5. Influence of Pore Characteristics on the Fate and Distribution of Newly Added Carbon

    Directory of Open Access Journals (Sweden)

    Michelle Y. Quigley

    2018-06-01

    Full Text Available Pores create a transportation network within a soil matrix, which controls the flow of air, water, and movement of microorganisms. The flow of air, water, and movement of microbes, in turn, control soil carbon dynamics. Computed microtomography (μCT allows for the visualization of pore structure at micron scale, but quantitative information on contribution of pores to the fate and protection of soil carbon, essential for modeling, is still lacking. This study uses the natural difference between carbon isotopes of C3 and C4 plants to determine how the presence of pores of different sizes affects spatial distribution patterns of newly added carbon immediately after plant termination and then after 1-month incubation. We considered two contrasting soil structure scenarios: soil with the structure kept intact and soil for which the structure was destroyed via sieving. For the experiment, soil was collected from 0–15 cm depth at a 20-year continuous maize (Zea mays L., C4 plant experiment into which cereal rye (Secale cereale L., C3 plant was planted. Intact soil fragments (5–6 mm were procured after 3 months rye growth in a greenhouse. Pore characteristics of the fragments were determined through μCT imaging. Each fragment was sectioned and total carbon, total nitrogen, δ13C, and δ15N were measured. The results indicate that, prior to incubation, greater presence of 40–90 μm pores was associated with higher levels of C3 carbon, pointing to the positive role of these pores in transport of new C inputs. Nevertheless, after incubation, the association became negative, indicating greater losses of newly added C in such pores. These trends were statistically significant in destroyed-structure soil and numerical in intact-structure soil. In soils of intact-structures, after incubation, higher levels of total carbon were associated with greater abundance of 6.5–15 and 15–40 μm pores, indicating a lower carbon loss associated with these

  6. Anisotropy of the Subsoil Pore System As Affected by High Mechanical Stresses

    DEFF Research Database (Denmark)

    Berisso, Feto Esimo; Schjønning, Per; Keller, Thomas

    and horizontally at 0.3, 0.5, 0.7 and 0.9 m depths (the two lower depths only in Sweden) in two treatments (compacted and control). Water retention, air permeability (ka) and gas diffusivity (Ds/Do) were determined in the laboratory. We defined an anisotropy factor (AF) as the ratio of a certain soil property...... measured in the horizontal direction to the same property measured in vertical direction. For both soils and both treatments, ka at -100 hPa was higher in vertical direction than in horizontal direction (AF ....12 – 0.34 in the sandy loam soil and clay soil, respectively. AF was closer to 1 for the compacted treatments for both soils. We applied Ball’s tube model for the pore system and calculated the number of soil pores in a given soil cross-sectional area and the tube-equivalent pore diameter. Vertical cores...

  7. Fines Classification Based on Sensitivity to Pore-Fluid Chemistry

    KAUST Repository

    Jang, Junbong; Santamarina, Carlos

    2015-01-01

    The 75-μm particle size is used to discriminate between fine and coarse grains. Further analysis of fine grains is typically based on the plasticity chart. Whereas pore-fluid-chemistry-dependent soil response is a salient and distinguishing

  8. Influence of pore water in the seabed on dynamic response of offshore wind turbines on monopiles

    DEFF Research Database (Denmark)

    Bayat, Mehdi; Andersen, Lars Vabbersgaard; Ibsen, Lars Bo

    2017-01-01

    Highlights •Sandy soil can present reduction of soil stiffness and maximum value of damping. •Equivalent dashpot and mass at the pile cap are highly dependent on the soil type. •Dynamic soil stiffness for offshore monopile foundation is calculated. •Soil damping around offshore monopile wind turb...... turbine foundation is calculated. •The effect of pore pressure and load frequency is illustrated....

  9. Pore-size distribution and compressibility of coarse sandy subsoil with added biochar

    DEFF Research Database (Denmark)

    Petersen, C. T.; Hansen, E.; Larsen, H. H.

    2016-01-01

    Sustainable agricultural production on coarse sandy soil is constrained by the restricted growth of roots, and poor water and nutrient retention. Amending the soil with biochar can reduce these problems, but the processes involved are not known in detail. We investigated in the laboratory...... the effects of two fine-grained gasification biochars made of straw (LTST) and other materials (LTSN) and of one fast pyrolysis straw biochar (FPST) on pore-size distribution and soil compressibility when added to coarse sandy subsoil. Water retention and therefore pore-size distribution were affected...... systematically. All biochars converted drainable pore space with pore diameters in the range 60–300 µm into water-retaining pores of size 0.2–60 µm, which was taken as an estimate of available water capacity (AWC). Effects were linear over the whole range of biochar (0–4% by mass). The effect of LTST and LTSN...

  10. Laboratory characterization of shale pores

    Science.gov (United States)

    Nur Listiyowati, Lina

    2018-02-01

    To estimate the potential of shale gas reservoir, one needs to understand the characteristics of pore structures. Characterization of shale gas reservoir microstructure is still a challenge due to ultra-fine grained micro-fabric and micro level heterogeneity of these sedimentary rocks. The sample used in the analysis is a small portion of any reservoir. Thus, each measurement technique has a different result. It raises the question which methods are suitable for characterizing pore shale. The goal of this paper is to summarize some of the microstructure analysis tools of shale rock to get near-real results. The two analyzing pore structure methods are indirect measurement (MIP, He, NMR, LTNA) and direct observation (SEM, TEM, Xray CT). Shale rocks have a high heterogeneity; thus, it needs multiscale quantification techniques to understand their pore structures. To describe the complex pore system of shale, several measurement techniques are needed to characterize the surface area and pore size distribution (LTNA, MIP), shapes, size and distribution of pore (FIB-SEM, TEM, Xray CT), and total porosity (He pycnometer, NMR). The choice of techniques and methods should take into account the purpose of the analysis and also the time and budget.

  11. Preferential flow from pore to landscape scales

    Science.gov (United States)

    Koestel, J. K.; Jarvis, N.; Larsbo, M.

    2017-12-01

    In this presentation, we give a brief personal overview of some recent progress in quantifying preferential flow in the vadose zone, based on our own work and those of other researchers. One key challenge is to bridge the gap between the scales at which preferential flow occurs (i.e. pore to Darcy scales) and the scales of interest for management (i.e. fields, catchments, regions). We present results of recent studies that exemplify the potential of 3-D non-invasive imaging techniques to visualize and quantify flow processes at the pore scale. These studies should lead to a better understanding of how the topology of macropore networks control key state variables like matric potential and thus the strength of preferential flow under variable initial and boundary conditions. Extrapolation of this process knowledge to larger scales will remain difficult, since measurement technologies to quantify macropore networks at these larger scales are lacking. Recent work suggests that the application of key concepts from percolation theory could be useful in this context. Investigation of the larger Darcy-scale heterogeneities that generate preferential flow patterns at the soil profile, hillslope and field scales has been facilitated by hydro-geophysical measurement techniques that produce highly spatially and temporally resolved data. At larger regional and global scales, improved methods of data-mining and analyses of large datasets (machine learning) may help to parameterize models as well as lead to new insights into the relationships between soil susceptibility to preferential flow and site attributes (climate, land uses, soil types).

  12. Impact of Pore-Scale Wettability on Rhizosphere Rewetting

    Directory of Open Access Journals (Sweden)

    Pascal Benard

    2018-04-01

    Full Text Available Vast amounts of water flow through a thin layer of soil around the roots, the rhizosphere, where high microbial activity takes place—an important hydrological and biological hotspot. The rhizosphere was shown to turn water repellent upon drying, which has been interpreted as the effect of mucilage secreted by roots. The effects of such rhizosphere water dynamics on plant and microbial activity are unclear. Furthermore, our understanding of the biophysical mechanisms controlling the rhizosphere water repellency remains largely speculative. Our hypothesis is that the key to describe the emergence of water repellency lies within the microscopic distribution of wettability on the pore-scale. At a critical mucilage content, a sufficient fraction of pores is blocked and the rhizosphere turns water repellent. Here we tested whether a percolation approach is capable to predict the flow behavior near the critical mucilage content. The wettability of glass beads and sand mixed with chia seed mucilage was quantified by measuring the infiltration rate of water drops. Drop infiltration was simulated using a simple pore-network model in which mucilage was distributed heterogeneously throughout the pore space with a preference for small pores. The model approach proved capable to capture the percolation nature of the process, the sudden transition from wettable to water repellent and the high variability in infiltration rates near the percolation threshold. Our study highlights the importance of pore-scale distribution of mucilage in the emergent flow behavior across the rhizosphere.

  13. Development and assessment of transparent soil and particle image velocimetry in dynamic soil-structure interaction

    Science.gov (United States)

    2007-02-01

    This research combines Particle Image Velocimetry (PIV) and transparent soil to investigate the dynamic rigid block and soil interaction. In order to get a low viscosity pore fluid for the transparent soil, 12 different types of chemical solvents wer...

  14. The Water-Induced Linear Reduction Gas Diffusivity Model Extended to Three Pore Regions

    DEFF Research Database (Denmark)

    Chamindu, T. K. K. Deepagoda; de Jonge, Lis Wollesen; Kawamoto, Ken

    2015-01-01

    . Characterization of soil functional pore structure is an essential prerequisite to understand key gas transport processes in variably saturated soils in relation to soil ecosystems, climate, and environmental services. In this study, the water-induced linear reduction (WLR) soil gas diffusivity model originally...... gas diffusivity from moist to dry conditions across differently structured porous media, including narrow soil size fractions, perforated plastic blocks, fractured limestone, peaty soils, aggregated volcanic ash soils, and particulate substrates for Earth- or space-based applications. The new Cip...

  15. Primary study on image addition technique in CT measuring used to determine the malalignment of patellofemoral joints

    International Nuclear Information System (INIS)

    Huan Jian; Gong Jianping; Zhu Jianbing; Dong Qirong; Lu Zhian

    2000-01-01

    Objective: To evaluate the use of image addition technique in the field of CT measuring on patellofemoral joints. Method: In contractive condition and relaxant condition of quadriceps, 60 knee joints of 30 patients (47 knee joints accompanied with peri-patellar pain) were examined by CT scanning, and the CT image addition and single technique. Results: In contractive and relaxant condition of quadriceps in the normal group, the difference between index measured by image addition technique were not significant and it was found that demonstrated measurement error of image addition was smaller, but there was significant difference between index measured by single technique, and it suggests that its replication was bad. Conclusion: Use of image addition technique can decrease measurement error and play a important role on accurately determining the malalignment of patellofemoral joints

  16. Antera 3D capabilities for pore measurements.

    Science.gov (United States)

    Messaraa, C; Metois, A; Walsh, M; Flynn, J; Doyle, L; Robertson, N; Mansfield, A; O'Connor, C; Mavon, A

    2018-04-29

    The cause of enlarged pores remains obscure but still remains of concern for women. To complement subjective methods, bioengineered methods are needed for quantification of pores visibility following treatments. The study objective was to demonstrate the suitability of pore measurements from the Antera 3D. Pore measurements were collected on 22 female volunteers aged 18-65 years with the Antera 3D, the DermaTOP and image analysis on photographs. Additionally, 4 raters graded pore size on photographs on a scale 0-5. Repeatability of Antera 3D parameters was ascertained and the benefit of a pore minimizer product on the cheek was assessed on a sub panel of seven female volunteers. Pore parameters using the Antera were shown to depict pore severity similar to raters on photographs, except for Max Depth. Mean pore volume, mean pore area and count were moderately correlated with DermaTOP parameters (up to r = .50). No relationship was seen between the Antera 3D and pore visibility analysis on photographs. The most repeatable parameters were found to be mean pore volume, mean pore area and max depth, especially for the small and medium filters. The benefits of a pore minimizer product were the most striking for mean pore volume and mean pore area when using the small filter for analysis, rather than the medium/large ones. Pore measurements with the Antera 3D represent a reliable tool for efficacy and field studies, with an emphasis of the small filter for analysis for the mean pore volume/mean pore area parameters. © 2018 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

  17. Understanding the microscopic moisture migration in pore space using DEM simulation

    Directory of Open Access Journals (Sweden)

    Yuan Guo

    2015-04-01

    Full Text Available The deformation of soil skeleton and migration of pore fluid are the major factors relevant to the triggering of and damages by liquefaction. The influence of pore fluid migration during earthquake has been demonstrated from recent model experiments and field case studies. Most of the current liquefaction assessment models are based on testing of isotropic liquefiable materials. However the recent New Zealand earthquake shows much severer damages than those predicted by existing models. A fundamental cause has been contributed to the embedded layers of low permeability silts. The existence of these silt layers inhibits water migration under seismic loads, which accelerated liquefaction and caused a much larger settlement than that predicted by existing theories. This study intends to understand the process of moisture migration in the pore space of sand using discrete element method (DEM simulation. Simulations were conducted on consolidated undrained triaxial testing of sand where a cylinder sample of sand was built and subjected to a constant confining pressure and axial loading. The porosity distribution was monitored during the axial loading process. The spatial distribution of porosity change was determined, which had a direct relationship with the distribution of excess pore water pressure. The non-uniform distribution of excess pore water pressure causes moisture migration. From this, the migration of pore water during the loading process can be estimated. The results of DEM simulation show a few important observations: (1 External forces are mainly carried and transmitted by the particle chains of the soil sample; (2 Porosity distribution during loading is not uniform due to non-homogeneous soil fabric (i.e. the initial particle arrangement and existence of particle chains; (3 Excess pore water pressure develops differently at different loading stages. At the early stage of loading, zones with a high initial porosity feature higher

  18. Pore structure characteristics after two years biochar application to a sandy loam field

    DEFF Research Database (Denmark)

    Sun, Zhencai; Arthur, Emmanuel; de Jonge, Lis Wollesen

    2015-01-01

    the effects of birch wood biochar (20, 40, and 100 Mg ha−1) applied to a sandy loam on soil total porosity and pore structure indices. Bulk and intact soil samples were collected for physicochemical analyses and water retention and gas diffusivity measurements between pF 1.0 and pF 3.0. Biochar application...

  19. Wave-induced stresses and pore pressures near a mudline

    Directory of Open Access Journals (Sweden)

    Andrzej Sawicki

    2008-12-01

    Full Text Available Conventional methods for the determination of water-wave induced stresses inseabeds composed of granular soils are based on Biot-type models, in which the soilskeleton is treated as an elastic medium. Such methods predict effective stressesin the soil that are unacceptable from the physical point of view, as they permittensile stresses to occur near the upper surface of the seabed. Therefore, in thispaper the granular soil is assumed to behave as an elastic-ideally plastic material,with the Coulomb-Mohr yield criterion adopted to bound admissible stress states inthe seabed. The governing equations are solved numerically by a~finite differencemethod. The results of simulations, carried out for the case of time-harmonicwater waves, illustrate the depth distributions of the excess pore pressures and theeffective stresses in the seabed, and show the shapes of zones of soil in the plastic state.~In particular, the effects on the seabed behaviour of suchparameters as the degree of pore water saturation, the soil permeability, and theearth pressure coefficient, are illustrated.

  20. Coating of silicon pore optics

    DEFF Research Database (Denmark)

    Cooper-Jensen, Carsten P.; Ackermann, M.; Christensen, Finn Erland

    2009-01-01

    For the International X-ray observatory (IXO), a mirror module with an effective area of 3 m2 at 1.25 keV and at least 0.65 m2 at 6 keV has to be realized. To achieve this goal, coated silicon pore optics has been developed over the last years. One of the challenges is to coat the Si plates...

  1. Pore volume is most highly correlated with the visual assessment of skin pores.

    Science.gov (United States)

    Kim, S J; Shin, M K; Back, J H; Koh, J S

    2014-11-01

    Many studies have been focused on evaluating assessment techniques for facial pores amid growing attention on skin care. Ubiquitous techniques used to assess the size of facial pores include visual assessment, cross-section images of the skin surface, and profilometric analysis of silicone replica of the facial skin. In addition, there are indirect assessment methods, including observation of pores based on confocal laser scanning microscopy and the analysis of sebum secretion and skin elasticity. The aim of this study was to identify parameters useful in estimating pore of surface in normal skin. The severity of pores on the cheek area by frontal optical images was divided on a 0-6 scale with '0' being faint and small pore and '6' being obvious and large pore. After the photos of the frontal cheek of 32 women aged between 35 and 49 were taken, the size of their pores was measured on a 0-6 scale; and the correlation between visual grading of pore and various evaluations (pore volume by 3-D image, pore area and number by Optical Image Analyzer) contributing to pore severity investigated using direct, objective, and noninvasive evaluations. The visual score revealed that the size of pores was graded on a 1-6 scale. Visual grading of pore was highly correlated with pore volume measured from 3-D images and pore area measured from 2-D optical images in the order (P pore was also slightly correlated with the number of pores in size of over 0.04 mm(2) (P pore score and pore volume can be explained by 3-D structural characteristics of pores. It is concluded that pore volume and area serve as useful parameters in estimating pore of skin surface. © 2014 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

  2. Protein crystal nucleation in pores.

    Science.gov (United States)

    Nanev, Christo N; Saridakis, Emmanuel; Chayen, Naomi E

    2017-01-16

    The most powerful method for protein structure determination is X-ray crystallography which relies on the availability of high quality crystals. Obtaining protein crystals is a major bottleneck, and inducing their nucleation is of crucial importance in this field. An effective method to form crystals is to introduce nucleation-inducing heterologous materials into the crystallization solution. Porous materials are exceptionally effective at inducing nucleation. It is shown here that a combined diffusion-adsorption effect can increase protein concentration inside pores, which enables crystal nucleation even under conditions where heterogeneous nucleation on flat surfaces is absent. Provided the pore is sufficiently narrow, protein molecules approach its walls and adsorb more frequently than they can escape. The decrease in the nucleation energy barrier is calculated, exhibiting its quantitative dependence on the confinement space and the energy of interaction with the pore walls. These results provide a detailed explanation of the effectiveness of porous materials for nucleation of protein crystals, and will be useful for optimal design of such materials.

  3. Lattice density functional theory investigation of pore shape effects. I. Adsorption in single nonperiodic pores.

    Science.gov (United States)

    Malanoski, A P; van Swol, Frank

    2002-10-01

    A fully explicit in three dimensions lattice density functional theory is used to investigate adsorption in single nonperiodic pores. The effect of varying pore shape from the slits and cylinders that are normally simulated was our primary interest. A secondary concern was the results for pores with very large diameters. The shapes investigated were square pores with or without surface roughness, cylinders, right triangle pores, and trapezoidal pores. It was found that pores with very similar shape factors gave similar results but that the introduction of acute angled corners or very large side ratio lengths in rectangular pores gave results that were significantly different. Further, a rectangular pore going towards the limit of infinite side ratio does not approach the results of a slit pore. In all of these cases, the importance of features that are present for only a small portion of the pore is demonstrated.

  4. The Arabidopsis Nuclear Pore and Nuclear Envelope

    OpenAIRE

    Meier, Iris; Brkljacic, Jelena

    2010-01-01

    The nuclear envelope is a double membrane structure that separates the eukaryotic cytoplasm from the nucleoplasm. The nuclear pores embedded in the nuclear envelope are the sole gateways for macromolecular trafficking in and out of the nucleus. The nuclear pore complexes assembled at the nuclear pores are large protein conglomerates composed of multiple units of about 30 different nucleoporins. Proteins and RNAs traffic through the nuclear pore complexes, enabled by the interacting activities...

  5. Relationship between pore structure and compressive strength

    Indian Academy of Sciences (India)

    Properties of concrete are strongly dependent on its pore structure features, porosity being an important one among them. This study deals with developing an understanding of the pore structure-compressive strength relationship in concrete. Several concrete mixtures with different pore structures are proportioned and ...

  6. Facial Pores: Definition, Causes, and Treatment Options.

    Science.gov (United States)

    Lee, Sang Ju; Seok, Joon; Jeong, Se Yeong; Park, Kui Young; Li, Kapsok; Seo, Seong Jun

    2016-03-01

    Enlarged skin pores refer to conditions that present with visible topographic changes of skin surfaces. Although not a medical concern, enlarged pores are a cosmetic concern for a large number of individuals. Moreover, clear definition and possible causes of enlarged pores have not been elucidated. To review the possible causes and treatment options for skin pores. This article is based on a review of the medical literature and the authors' clinical experience in investigating and treating skin pores. There are 3 major clinical causes of enlarged facial pores, namely high sebum excretion, decreased elasticity around pores, and increased hair follicle volume. In addition, chronic recurrent acne, sex hormones, and skin care regimen can affect pore size. Given the different possible causes for enlarged pores, therapeutic modalities must be individualized for each patient. Potential factors that contribute to enlarged skin pores include excessive sebum, decreased elasticity around pores, and increased hair follicle volume. Because various factors cause enlarged facial pores, it might be useful to identify the underlying causes to be able to select the appropriate treatment.

  7. Dynamic contrast enhanced CT measurement of blood flow during interstitial laser photocoagulation: comparison with an Arrhenius damage model

    International Nuclear Information System (INIS)

    Purdie, T.J.; Lee, T.J.; Iizuka, M.; Sherar, M.D.

    2000-01-01

    One effect of heating during interstitial laser photocoagulation (ILP) is to directly destroy the tumour vasculature resulting in a loss of viable blood supply. Therefore, blood flow measured during and after treatment can be a useful indicator of tissue thermal damage. In this study, the effect of ILP treatment on rabbit thigh tumours was investigated by measuring blood flow changes using dynamic contrast enhanced computed tomography (CT). The CT measured changes in blood flow of treated tumour tissue were fitted to an Arrhenius model assuming first order rate kinetics. Our results show that changes in blood flow of tumour tissue distant from surrounding normal tissue are well described by an Arrhenius model. By contrast, the temperature profile of tumour tissue adjacent to normal tissue must be modified to account for heat dissipation by the latter. Finally, the Arrhenius parameters derived in the study are similar to those derived by heating tumour tissue to a lower temperature (<47 deg. C) than the current study. In conclusion, CT can be used to monitor blood flow changes during ILP and these measurements are related to the thermal damage predicted by the Arrhenius model. (author)

  8. The hydraulic conductivity of sediments: A pore size perspective

    KAUST Repository

    Ren, X.W.

    2017-12-06

    This article presents an analysis of previously published hydraulic conductivity data for a wide range of sediments. All soils exhibit a prevalent power trend between the hydraulic conductivity and void ratio. Data trends span 12 orders of magnitude in hydraulic conductivity and collapse onto a single narrow trend when the hydraulic conductivity data are plotted versus the mean pore size, estimated using void ratio and specific surface area measurements. The sensitivity of hydraulic conductivity to changes in the void ratio is higher than the theoretical value due to two concurrent phenomena: 1) percolating large pores are responsible for most of the flow, and 2) the larger pores close first during compaction. The prediction of hydraulic conductivity based on macroscale index parameters in this and similar previous studies has reached an asymptote in the range of kmeas/5≤kpredict≤5kmeas. The remaining uncertainty underscores the important role of underlying sediment characteristics such as pore size distribution, shape, and connectivity that are not measured with index properties. Furthermore, the anisotropy in hydraulic conductivity cannot be recovered from scalar parameters such as index properties. Overall, results highlight the robustness of the physics inspired data scrutiny based Hagen–Poiseuille and Kozeny-Carman analyses.

  9. Comparison of predicted and observed pore pressure increases on Rio Blanco

    International Nuclear Information System (INIS)

    Banister, J.R.; Ellett, D.M.; Pyke, R.; Winters, L.

    1976-01-01

    The RIO BLANCO event presented the opportunity to monitor, under controlled conditions in the field, the increase in pore pressures resulting from ground motion similar to an earthquake. In situ measurements of pore pressure changes were made by Sandia Laboratories and Dames and Moore. This report contains the results of laboratory tests believed to be indicative in assessing the magnitude of pore pressure increases and probability of soil liquefaction. These include triaxial load tests, gradation of grain size, and relative density. No liquefaction was observed in the field, and the increase of in situ pore pressures were much less than expected from laboratory measurements. Allied subjects presented in this report are pore pressure propagation and dissipation profiles, the previously unpublished pore pressure measurements made by Dames and Moore, and the boring logs for the various sites where measurements were taken. It is concluded that methods used to predict pore pressure increases and liquefaction potential are overly conservative, at least for these alluvial and colluvial soils found in Colorado

  10. Investigating the pore-water chemistry effects on the volume change behaviour of Boom clay

    Science.gov (United States)

    Deng, Y. F.; Cui, Y. J.; Tang, A. M.; Nguyen, X. P.; Li, X. L.; Van Geet, M.

    The Essen site has been chosen as an alternative site for nuclear waste disposal in Belgium. The soil formation involved at this site is the same as at Mol site: Boom clay. However, owing to its geographical situation closer to the sea, Boom clay at Essen presents a pore water salinity 4-5 times higher than Boom clay at Mol. This study aims at studying the effects of pore water salinity on the hydro-mechanical behaviour of Boom clay. Specific oedometer cells were used allowing “flushing” the pore water in soil specimen by synthetic pore water or distilled water. The synthetic pore water used was prepared with the chemistry as that for the site water: 5.037 g/L for core Ess83 and 5.578 g/L for core Ess96. Mechanical loading was then carried out on the soil specimen after flushing. The results show that water salinity effect on the liquid limit is negligible. The saturation or pore water replacement under the in situ effective stress of 2.4 MPa does not induce significant volume change. For Ess83, hydro-mechanical behaviour was found to be slightly influenced by the water salinity; on the contrary, no obvious effect was identified on the hydro-mechanical behaviour of Ess96. This can be attributed to the higher smectite content in Ess83 than in Ess96.

  11. Measuring kinetic drivers of pneumolysin pore structure.

    Science.gov (United States)

    Gilbert, Robert J C; Sonnen, Andreas F-P

    2016-05-01

    Most membrane attack complex-perforin/cholesterol-dependent cytolysin (MACPF/CDC) proteins are thought to form pores in target membranes by assembling into pre-pore oligomers before undergoing a pre-pore to pore transition. Assembly during pore formation is into both full rings of subunits and incomplete rings (arcs). The balance between arcs and full rings is determined by a mechanism dependent on protein concentration in which arc pores arise due to kinetic trapping of the pre-pore forms by the depletion of free protein subunits during oligomerization. Here we describe the use of a kinetic assay to study pore formation in red blood cells by the MACPF/CDC pneumolysin from Streptococcus pneumoniae. We show that cell lysis displays two kinds of dependence on protein concentration. At lower concentrations, it is dependent on the pre-pore to pore transition of arc oligomers, which we show to be a cooperative process. At higher concentrations, it is dependent on the amount of pneumolysin bound to the membrane and reflects the affinity of the protein for its receptor, cholesterol. A lag occurs before cell lysis begins; this is dependent on oligomerization of pneumolysin. Kinetic dissection of cell lysis by pneumolysin demonstrates the capacity of MACPF/CDCs to generate pore-forming oligomeric structures of variable size with, most likely, different functional roles in biology.

  12. Assessment the effect of homogenized soil on soil hydraulic properties and soil water transport

    Science.gov (United States)

    Mohawesh, O.; Janssen, M.; Maaitah, O.; Lennartz, B.

    2017-09-01

    Soil hydraulic properties play a crucial role in simulating water flow and contaminant transport. Soil hydraulic properties are commonly measured using homogenized soil samples. However, soil structure has a significant effect on the soil ability to retain and to conduct water, particularly in aggregated soils. In order to determine the effect of soil homogenization on soil hydraulic properties and soil water transport, undisturbed soil samples were carefully collected. Five different soil structures were identified: Angular-blocky, Crumble, Angular-blocky (different soil texture), Granular, and subangular-blocky. The soil hydraulic properties were determined for undisturbed and homogenized soil samples for each soil structure. The soil hydraulic properties were used to model soil water transport using HYDRUS-1D.The homogenized soil samples showed a significant increase in wide pores (wCP) and a decrease in narrow pores (nCP). The wCP increased by 95.6, 141.2, 391.6, 3.9, 261.3%, and nCP decreased by 69.5, 10.5, 33.8, 72.7, and 39.3% for homogenized soil samples compared to undisturbed soil samples. The soil water retention curves exhibited a significant decrease in water holding capacity for homogenized soil samples compared with the undisturbed soil samples. The homogenized soil samples showed also a decrease in soil hydraulic conductivity. The simulated results showed that water movement and distribution were affected by soil homogenizing. Moreover, soil homogenizing affected soil hydraulic properties and soil water transport. However, field studies are being needed to find the effect of these differences on water, chemical, and pollutant transport under several scenarios.

  13. Electroosmotic transport in fine grained sediments with respect to pore throats

    Energy Technology Data Exchange (ETDEWEB)

    Krauss, H.; Zorn, R.; Haus, R.; Czurda, K. [Dept. of Applied Geology, Univ. Karlsruhe (Germany)

    2001-07-01

    Electroosmotic experiments were performed with two different fine grained soils, which were consolidated in different ways. The electroosmotic permeability was calculated using the transported volume of water under a dc electric field. In addition to the pH-values prior and after the experiments near the anode and cathode the dominating pore throat-diameters of the samples were analysed by mercury porosimetry. The electroosmotic permeability can be correlated with the dominating pore throat-diameter. Not only chemical parameters like zeta-potential or ion-concentration but also the kind and structure of the soil particles characterize electroosmotic transport. (orig.)

  14. Long-term Differences in Tillage and Land Use Affect Intra-aggregate Pore Heterogeneity

    International Nuclear Information System (INIS)

    Kravchenko, A.N.; Wang, A.N.W.; Smucker, A.J.M.; Rivers, M.L.

    2011-01-01

    Recent advances in computed tomography provide measurement tools to study internal structures of soil aggregates at micrometer resolutions and to improve our understanding of specific mechanisms of various soil processes. Fractal analysis is one of the data analysis tools that can be helpful in evaluating heterogeneity of the intra-aggregate internal structures. The goal of this study was to examine how long-term tillage and land use differences affect intra-aggregate pore heterogeneity. The specific objectives were: (i) to develop an approach to enhance utility of box-counting fractal dimension in characterizing intra-aggregate pore heterogeneity; (ii) to examine intra-aggregate pores in macro-aggregates (4-6 mm in size) using the computed tomography scanning and fractal analysis, and (iii) to compare heterogeneity of intra-aggregate pore space in aggregates from loamy Alfisol soil subjected to 20 yr of contrasting management practices, namely, conventional tillage (chisel plow) (CT), no-till (NT), and native succession vegetation (NS). Three-dimensional images of the intact aggregates were obtained with a resolution of 14.6 (micro)m at the Advanced Photon Source, Argonne National Laboratory, Argonne, IL. Proposed box-counting fractal dimension normalization was successfully implemented to estimate heterogeneity of pore voxel distributions without bias associated with different porosities in soil aggregates. The aggregates from all three studied treatments had higher porosity associated with large (>100 (micro)m) pores present in their centers than in their exteriors. Pores 15 to 60 (micro)m were equally abundant throughout entire aggregates but their distributions were more heterogeneous in aggregate interiors. The CT aggregates had greater numbers of pores 15 to 60 (micro)m than NT and NS. Distribution of pore voxels belonging to large pores was most heterogeneous in the aggregates from NS, followed by NT and by CT. This result was consistent with presence of

  15. Pore surface engineering in covalent organic frameworks.

    Science.gov (United States)

    Nagai, Atsushi; Guo, Zhaoqi; Feng, Xiao; Jin, Shangbin; Chen, Xiong; Ding, Xuesong; Jiang, Donglin

    2011-11-15

    Covalent organic frameworks (COFs) are a class of important porous materials that allow atomically precise integration of building blocks to achieve pre-designable pore size and geometry; however, pore surface engineering in COFs remains challenging. Here we introduce pore surface engineering to COF chemistry, which allows the controlled functionalization of COF pore walls with organic groups. This functionalization is made possible by the use of azide-appended building blocks for the synthesis of COFs with walls to which a designable content of azide units is anchored. The azide units can then undergo a quantitative click reaction with alkynes to produce pore surfaces with desired groups and preferred densities. The diversity of click reactions performed shows that the protocol is compatible with the development of various specific surfaces in COFs. Therefore, this methodology constitutes a step in the pore surface engineering of COFs to realize pre-designed compositions, components and functions.

  16. Effects of fractal pore on coal devolatilization

    Energy Technology Data Exchange (ETDEWEB)

    Chen, Yongli; He, Rong [Tsinghua Univ., Beijing (China). Dept. of Thermal Engineering; Wang, Xiaoliang; Cao, Liyong [Dongfang Electric Corporation, Chengdu (China). Centre New Energy Inst.

    2013-07-01

    Coal devolatilization is numerically investigated by drop tube furnace and a coal pyrolysis model (Fragmentation and Diffusion Model). The fractal characteristics of coal and char pores are investigated. Gas diffusion and secondary reactions in fractal pores are considered in the numerical simulations of coal devolatilization, and the results show that the fractal dimension is increased firstly and then decreased later with increased coal conversions during devolatilization. The mechanisms of effects of fractal pores on coal devolatilization are analyzed.

  17. Electroosmotic pore transport in human skin.

    Science.gov (United States)

    Uitto, Olivia D; White, Henry S

    2003-04-01

    To determine the pathways and origin of electroosmotic flow in human skin. Iontophoretic transport of acetaminophen in full thickness human cadaver skin was visualized and quantified by scanning electrochemical microscopy. Electroosmotic flow in the shunt pathways of full thickness skin was compared to flow in the pores of excised stratum corneum and a synthetic membrane pore. The penetration of rhodamine 6G into pore structures was investigated by laser scanning confocal microscopy. Electroosmotic transport is observed in shunt pathways in full thickness human skin (e.g., hair follicles and sweat glands), but not in pore openings of freestanding stratum corneum. Absolute values of the diffusive and iontophoretic pore fluxes of acetaminophen in full thickness human skin are also reported. Rhodamine 6G is observed to penetrate to significant depths (approximately 200 microm) along pore pathways. Iontophoresis in human cadaver skin induces localized electroosmotic flow along pore shunt paths. Electroosmotic forces arise from the passage of current through negatively charged mesoor nanoscale pores (e.g., gap functions) within cellular regions that define the pore structure beneath the stratum corneum.

  18. Can pore-clogging by ash explain post-fire runoff?

    Science.gov (United States)

    Stoof, Cathelijne R.; Gevaert, Anouk I.; Baver, Christine; Hassanpour, Bahareh; Morales, Veronica L.; Zhang, Wei; Martin, Deborah; Giri, Shree K.; Steenhuis, Tammo S.

    2016-01-01

    Ash plays an important role in controlling runoff and erosion processes after wildfire and has frequently been hypothesised to clog soil pores and reduce infiltration. Yet evidence for clogging is incomplete, as research has focussed on identifying the presence of ash in soil; the actual flow processes remain unknown. We conducted laboratory infiltration experiments coupled with microscope observations in pure sands, saturated hydraulic conductivity analysis, and interaction energy calculations, to test whether ash can clog pores (i.e. block pores such that infiltration is hampered and ponding occurs). Although results confirmed previous observations of ash washing into pores, clogging was not observed in the pure sands tested, nor were conditions found for which this does occur. Clogging by means of strong attachment of ash to sand was deemed unlikely given the negative surface charge of the two materials. Ponding due to washing in of ash was also considered improbable given the high saturated conductivity of pure ash and ash–sand mixtures. This first mechanistic step towards analysing ash transport and attachment processes in field soils therefore suggests that pore clogging by ash is unlikely to occur in sands. Discussion is provided on other mechanisms by which ash can affect post-fire hydrology.

  19. Impact of spatially correlated pore-scale heterogeneity on drying porous media

    Science.gov (United States)

    Borgman, Oshri; Fantinel, Paolo; Lühder, Wieland; Goehring, Lucas; Holtzman, Ran

    2017-07-01

    We study the effect of spatially-correlated heterogeneity on isothermal drying of porous media. We combine a minimal pore-scale model with microfluidic experiments with the same pore geometry. Our simulated drying behavior compares favorably with experiments, considering the large sensitivity of the emergent behavior to the uncertainty associated with even small manufacturing errors. We show that increasing the correlation length in particle sizes promotes preferential drying of clusters of large pores, prolonging liquid connectivity and surface wetness and thus higher drying rates for longer periods. Our findings improve our quantitative understanding of how pore-scale heterogeneity impacts drying, which plays a role in a wide range of processes ranging from fuel cells to curing of paints and cements to global budgets of energy, water and solutes in soils.

  20. The Effect of the Pore Entrance on Particle Motion in Slit Pores: Implications for Ultrathin Membranes.

    Science.gov (United States)

    Delavari, Armin; Baltus, Ruth

    2017-08-10

    Membrane rejection models generally neglect the effect of the pore entrance on intrapore particle transport. However, entrance effects are expected to be particularly important with ultrathin membranes, where membrane thickness is typically comparable to pore size. In this work, a 2D model was developed to simulate particle motion for spherical particles moving at small Re and infinite Pe from the reservoir outside the pore into a slit pore. Using a finite element method, particles were tracked as they accelerated across the pore entrance until they reached a steady velocity in the pore. The axial position in the pore where particle motion becomes steady is defined as the particle entrance length (PEL). PELs were found to be comparable to the fluid entrance length, larger than the pore size and larger than the thickness typical of many ultrathin membranes. Results also show that, in the absence of particle diffusion, hydrodynamic particle-membrane interactions at the pore mouth result in particle "funneling" in the pore, yielding cross-pore particle concentration profiles focused at the pore centerline. The implications of these phenomena on rejection from ultrathin membranes are examined.

  1. Automatic facial pore analysis system using multi-scale pore detection.

    Science.gov (United States)

    Sun, J Y; Kim, S W; Lee, S H; Choi, J E; Ko, S J

    2017-08-01

    As facial pore widening and its treatments have become common concerns in the beauty care field, the necessity for an objective pore-analyzing system has been increased. Conventional apparatuses lack in usability requiring strong light sources and a cumbersome photographing process, and they often yield unsatisfactory analysis results. This study was conducted to develop an image processing technique for automatic facial pore analysis. The proposed method detects facial pores using multi-scale detection and optimal scale selection scheme and then extracts pore-related features such as total area, average size, depth, and the number of pores. Facial photographs of 50 subjects were graded by two expert dermatologists, and correlation analyses between the features and clinical grading were conducted. We also compared our analysis result with those of conventional pore-analyzing devices. The number of large pores and the average pore size were highly correlated with the severity of pore enlargement. In comparison with the conventional devices, the proposed analysis system achieved better performance showing stronger correlation with the clinical grading. The proposed system is highly accurate and reliable for measuring the severity of skin pore enlargement. It can be suitably used for objective assessment of the pore tightening treatments. © 2016 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

  2. Radiative magnetohydrodynamic simulations of solar pores

    NARCIS (Netherlands)

    Cameron, R.; Schuessler, M.; Vögler, A.; Zakharov, V.

    2007-01-01

    Context. Solar pores represent a class of magnetic structures intermediate between small-scale magnetic flux concentrations in intergranular lanes and fully developed sunspots with penumbrae. Aims. We study the structure, energetics, and internal dynamics of pore-like magnetic structures by means of

  3. Cavitation and pore blocking in nanoporous glasses.

    Science.gov (United States)

    Reichenbach, C; Kalies, G; Enke, D; Klank, D

    2011-09-06

    In gas adsorption studies, porous glasses are frequently referred to as model materials for highly disordered mesopore systems. Numerous works suggest that an accurate interpretation of physisorption isotherms requires a complete understanding of network effects upon adsorption and desorption, respectively. The present article deals with nitrogen and argon adsorption at different temperatures (77 and 87 K) performed on a series of novel nanoporous glasses (NPG) with different mean pore widths. NPG samples contain smaller mesopores and significantly higher microporosity than porous Vycor glass or controlled pore glass. Since the mean pore width of NPG can be tuned sensitively, the evolution of adsorption characteristics with respect to a broadening pore network can be investigated starting from the narrowest nanopore width. With an increasing mean pore width, a H2-type hysteresis develops gradually which finally transforms into a H1-type. In this connection, a transition from a cavitation-induced desorption toward desorption controlled by pore blocking can be observed. Furthermore, we find concrete hints for a pore size dependence of the relative pressure of cavitation in highly disordered pore systems. By comparing nitrogen and argon adsorption, a comprehensive insight into adsorption mechanisms in novel disordered materials is provided. © 2011 American Chemical Society

  4. Soil physical criteria for evaluating irrigation suitability of Okija ...

    African Journals Online (AJOL)

    Suitability of upland soils of Anigbo Okija for irrigation was assessed using soil physical criteria of texture, depth, pore type, slope percent colour and soil structure for the purpose of estimating season farming and rainy season drought. Soils were classified using Soil Taxonomy and FAO/UNESCO legend. Mapping was ...

  5. FINGERPRINT MATCHING BASED ON PORE CENTROIDS

    Directory of Open Access Journals (Sweden)

    S. Malathi

    2011-05-01

    Full Text Available In recent years there has been exponential growth in the use of bio- metrics for user authentication applications. Automated Fingerprint Identification systems have become popular tool in many security and law enforcement applications. Most of these systems rely on minutiae (ridge ending and bifurcation features. With the advancement in sensor technology, high resolution fingerprint images (1000 dpi pro- vide micro level of features (pores that have proven to be useful fea- tures for identification. In this paper, we propose a new strategy for fingerprint matching based on pores by reliably extracting the pore features The extraction of pores is done by Marker Controlled Wa- tershed segmentation method and the centroids of each pore are con- sidered as feature vectors for matching of two fingerprint images. Experimental results shows that the proposed method has better per- formance with lower false rates and higher accuracy.

  6. Pore Network Modeling: Alternative Methods to Account for Trapping and Spatial Correlation

    KAUST Repository

    De La Garza Martinez, Pablo

    2016-05-01

    Pore network models have served as a predictive tool for soil and rock properties with a broad range of applications, particularly in oil recovery, geothermal energy from underground reservoirs, and pollutant transport in soils and aquifers [39]. They rely on the representation of the void space within porous materials as a network of interconnected pores with idealised geometries. Typically, a two-phase flow simulation of a drainage (or imbibition) process is employed, and by averaging the physical properties at the pore scale, macroscopic parameters such as capillary pressure and relative permeability can be estimated. One of the most demanding tasks in these models is to include the possibility of fluids to remain trapped inside the pore space. In this work I proposed a trapping rule which uses the information of neighboring pores instead of a search algorithm. This approximation reduces the simulation time significantly and does not perturb the accuracy of results. Additionally, I included spatial correlation to generate the pore sizes using a matrix decomposition method. Results show higher relative permeabilities and smaller values for irreducible saturation, which emphasizes the effects of ignoring the intrinsic correlation seen in pore sizes from actual porous media. Finally, I implemented the algorithm from Raoof et al. (2010) [38] to generate the topology of a Fontainebleau sandstone by solving an optimization problem using the steepest descent algorithm with a stochastic approximation for the gradient. A drainage simulation is performed on this representative network and relative permeability is compared with published results. The limitations of this algorithm are discussed and other methods are suggested to create a more faithful representation of the pore space.

  7. Pore Network Modeling: Alternative Methods to Account for Trapping and Spatial Correlation

    KAUST Repository

    De La Garza Martinez, Pablo

    2016-01-01

    Pore network models have served as a predictive tool for soil and rock properties with a broad range of applications, particularly in oil recovery, geothermal energy from underground reservoirs, and pollutant transport in soils and aquifers [39]. They rely on the representation of the void space within porous materials as a network of interconnected pores with idealised geometries. Typically, a two-phase flow simulation of a drainage (or imbibition) process is employed, and by averaging the physical properties at the pore scale, macroscopic parameters such as capillary pressure and relative permeability can be estimated. One of the most demanding tasks in these models is to include the possibility of fluids to remain trapped inside the pore space. In this work I proposed a trapping rule which uses the information of neighboring pores instead of a search algorithm. This approximation reduces the simulation time significantly and does not perturb the accuracy of results. Additionally, I included spatial correlation to generate the pore sizes using a matrix decomposition method. Results show higher relative permeabilities and smaller values for irreducible saturation, which emphasizes the effects of ignoring the intrinsic correlation seen in pore sizes from actual porous media. Finally, I implemented the algorithm from Raoof et al. (2010) [38] to generate the topology of a Fontainebleau sandstone by solving an optimization problem using the steepest descent algorithm with a stochastic approximation for the gradient. A drainage simulation is performed on this representative network and relative permeability is compared with published results. The limitations of this algorithm are discussed and other methods are suggested to create a more faithful representation of the pore space.

  8. Pore-water chemistry effects on the compressibility behaviour of Boom Clay

    International Nuclear Information System (INIS)

    Deng, Y.F.; Cui, Y.J.; Tang, A.M.; Nguyen, X.P.; Li, X.L.; Maarten, V.G.

    2010-01-01

    Document available in extended abstract form only. Boom clay is a thick deposit of over-consolidated marine clay, and belongs to the Oligocene series. Its hydraulic conductivity has been investigated since many years in Belgium within the site characterization program related to the performance assessment of potential geological disposal of high-level radioactive waste in this formation. Recently, the work of Wemaere et al. (2008) shows a significant variability of the hydraulic conductivity of the Boom clay. Indeed, they performed measurements on soil cores taken from four distant boreholes at various depths. The vertical hydraulic conductivity was found to vary from 3 x 10 -12 to 10 x 10 -12 m/s. It is suspected that this variability would be partly related to the water chemistry effects. Indeed, De Craen et al. (2006) shows that the pore-water chemical composition of soil cores taken from the Essen site is significantly different from that at the Mol site. If the pore water chemistry has strong effect on the hydraulic conductivity, its effect on the mechanical behaviour needs to be investigated too. The aim of this paper is to verify whether there are significant effects of pore-water chemistry on the soil compressibility. This study would be helpful to transpose the knowledge obtained from the Mol site to other sites of Boom clay formation where the geochemical components are different from the former site, as the hydro-mechanical characteristics of Boom clay at the Mol site has been widely investigated since the last decades. Two soil cores were taken from the Essen site at a depth of 227 m (Ess83) and 240 m (Ess96). Based on the geochemical analysis presented by De Craen et al. (2006), synthetic water having similar chemical composition of the in-situ pore-water was prepared. The identification geotechnical characteristics of these cores are shown in Table 2. It can be observed that the clay content (particle size < 2 μm) is relatively high (more than 50

  9. Enlarged facial pores: an update on treatments.

    Science.gov (United States)

    Dong, Joanna; Lanoue, Julien; Goldenberg, Gary

    2016-07-01

    Enlarged facial pores remain a common dermatologic and cosmetic concern from acne and rosacea, among other conditions, that is difficult to treat due to the multifactorial nature of their pathogenesis and negative impact on patients' quality of life. Enlarged facial pores are primarily treated through addressing associative factors, such as increased sebum production and cutaneous aging. We review the current treatment modalities for enlarged or dense facial pores, including topical retinoids, chemical peels, oral antiandrogens, and lasers and devices, with a focus on newer therapies.

  10. Control of pore size in epoxy systems.

    Energy Technology Data Exchange (ETDEWEB)

    Sawyer, Patricia Sue; Lenhart, Joseph Ludlow (North Dakota State University, Fargo, ND); Lee, Elizabeth (North Dakota State University, Fargo, ND); Kallam, Alekhya (North Dakota State University, Fargo, ND); Majumdar, Partha (North Dakota State University, Fargo, ND); Dirk, Shawn M.; Gubbins, Nathan; Chisholm, Bret J. (North Dakota State University, Fargo, ND); Celina, Mathias C.; Bahr, James (North Dakota State University, Fargo, ND); Klein, Robert J.

    2009-01-01

    Both conventional and combinatorial approaches were used to study the pore formation process in epoxy based polymer systems. Sandia National Laboratories conducted the initial work and collaborated with North Dakota State University (NDSU) using a combinatorial research approach to produce a library of novel monomers and crosslinkers capable of forming porous polymers. The library was screened to determine the physical factors that control porosity, such as porogen loading, polymer-porogen interactions, and polymer crosslink density. We have identified the physical and chemical factors that control the average porosity, pore size, and pore size distribution within epoxy based systems.

  11. Solute diffusivity in undisturbed soil

    DEFF Research Database (Denmark)

    Lægdsmand, Mette; Møldrup, Per; Schjønning, Per

    2012-01-01

    Solute diffusivity in soil plays a major role in many important processes with relation to plant growth and environmental issues. Soil solute diffusivity is affected by the volumetric water content as well as the morphological characteristics of water-filled pores. The solute diffusivity in intact...

  12. Factors impacting the electro conductivity variations of clayey soils

    International Nuclear Information System (INIS)

    Ouhadi, V. R.; Goodarzi, A. R.

    2007-01-01

    The variation of pore fluid properties in soil has a major effect on soil behaviour. This effect is a function of pore fluid properties and soil mineralogy. Such variation usually happens in the reservoirs of dams or in some geotechnical projects. The electro conductivity measurement is a simple method to monitor any variation in the pore fluid of soils. electro conductivity is the ability of a material to transmit (conduct) an electrical current. This paper focuses attention on the effect of soil-pore fluid interaction on the electro conductivity of clayey soils. A set of physico-chemical experiments are performed and the role of different factors including soil pH, soil mineralogy, soil: water ratio, cation and anion effects are investigated. The results of this study indicate that for soil that has a relatively low CEC, the anion type is an important factor, while the cation type does not noticeably affect the electro conductivity of the soil-solution. However, for such soil, an electrolyte property, i.e. its solubility, is much more effective than the CEC of the soil. In addition, it was observed that in the presence of neutral salts such as pore fluid, the pH of the soil-solution decreases causing an increase in the electro conductivity of the soil sample

  13. Valve seat pores sealed with thermosetting monomer

    Science.gov (United States)

    Olmore, A. B.

    1966-01-01

    Hard anodic coating provides a smooth wear resistant value seating surface on a cast aluminum alloy valve body. Vacuum impregnation with a thermosetting monomer, diallyl phthalate, seals the pores on the coating to prevent galvanic corrosion.

  14. Estimation of pore pressure from seismic velocities

    International Nuclear Information System (INIS)

    Perez, Zayra; Ojeda, German Y; Mateus, Darwin

    2009-01-01

    On pore pressure calculations it is common to obtain a profile in a well bore, which is then extrapolated toward offset wells. This practice might generate mistakes on pore pressure measurements, since geological conditions may change from a well bore to another, even into the same basin. Therefore, it is important to use other tools which allow engineers not only to detect and estimate in an indirect way overpressure zones, but also to keep a lateral tracking of possible changes that may affect those values in the different formations. Taking into account this situation, we applied a methodology that estimates formation pressure from 3D seismic velocities by using the Eaton method. First, we estimated formation pore pressure; then, we identified possible overpressure zones. Finally, those results obtained from seismic information were analyzed involving well logs and pore pressure tests, in order to compare real data with prediction based on seismic information from the Colombian foothill.

  15. OBSERVATIONS OF SAUSAGE MODES IN MAGNETIC PORES

    International Nuclear Information System (INIS)

    Morton, R. J.; Erdelyi, R.; Jess, D. B.; Mathioudakis, M.

    2011-01-01

    We present here evidence for the observation of the magnetohydrodynamic (MHD) sausage modes in magnetic pores in the solar photosphere. Further evidence for the omnipresent nature of acoustic global modes is also found. The empirical decomposition method of wave analysis is used to identify the oscillations detected through a 4170 A 'blue continuum' filter observed with the Rapid Oscillations in the Solar Atmosphere (ROSA) instrument. Out of phase, periodic behavior in pore size and intensity is used as an indicator of the presence of magnetoacoustic sausage oscillations. Multiple signatures of the magnetoacoustic sausage mode are found in a number of pores. The periods range from as short as 30 s up to 450 s. A number of the magnetoacoustic sausage mode oscillations found have periods of 3 and 5 minutes, similar to the acoustic global modes of the solar interior. It is proposed that these global oscillations could be the driver of the sausage-type magnetoacoustic MHD wave modes in pores.

  16. Soil compaction: Evaluation of stress transmission and resulting soil structure

    DEFF Research Database (Denmark)

    Naveed, Muhammad; Schjønning, Per; Keller, Thomas

    strength. As soon as the applied load is lower than the aggregate strength, the mode of stress transmission is discrete as stresses were mainly transmitted through chain of aggregates. With increasing applied load soil aggregates start deforming that transformed heterogeneous soil into homogenous......, as a result stress transmission mode was shifted from discrete towards more like a continuum. Continuum-like stress transmission mode was better simulated with Boussinesq (1885) model based on theory of elasticity compared to discrete. The soil-pore structure was greatly affected by increasing applied...... and compaction-resulted soil structure at the same time. Stress transmission was quantified using both X-ray CT and Tactilus sensor mat, and soil-pore structure was quantified using X-ray CT. Our results imply that stress transmission through soil highly depends on the magnitude of applied load and aggregate...

  17. Preliminary Investigation on the Behavior of Pore Air Pressure During Rainfall Infiltration

    Science.gov (United States)

    Ashraf Mohamad Ismail, Mohd; Min, Ng Soon; Hasliza Hamzah, Nur; Hazreek Zainal Abidin, Mohd; Madun, Aziman; Tajudin, Saiful Azhar Ahmad

    2018-04-01

    This paper focused on the preliminary investigation of pore air pressure behaviour during rainfall infiltration in order to substantiate the mechanism of rainfall induced slope failure. The actual behaviour or pore air pressure during infiltration is yet to be clearly understood as it is regularly assumed as atmospheric. Numerical modelling of one dimensional (1D) soil column was utilized in this study to provide a preliminary insight of this highlighted uncertainty. Parametric study was performed by using rainfall intensities of 1.85 x 10-3m/s and 1.16 x 10-4m/s applied on glass beads to simulate intense and modest rainfall conditions. Analysis results show that the high rainfall intensity causes more development of pore air pressure compared to low rainfall intensity. This is because at high rainfall intensity, the rainwater cannot replace the pore air smoothly thus confining the pore air. Therefore, the effect of pore air pressure has to be taken into consideration particularly during heavy rainfall.

  18. Universal Spatial Correlation Functions for Describing and Reconstructing Soil Microstructure

    Science.gov (United States)

    Skvortsova, Elena B.; Mallants, Dirk

    2015-01-01

    Structural features of porous materials such as soil define the majority of its physical properties, including water infiltration and redistribution, multi-phase flow (e.g. simultaneous water/air flow, or gas exchange between biologically active soil root zone and atmosphere) and solute transport. To characterize soil microstructure, conventional soil science uses such metrics as pore size and pore-size distributions and thin section-derived morphological indicators. However, these descriptors provide only limited amount of information about the complex arrangement of soil structure and have limited capability to reconstruct structural features or predict physical properties. We introduce three different spatial correlation functions as a comprehensive tool to characterize soil microstructure: 1) two-point probability functions, 2) linear functions, and 3) two-point cluster functions. This novel approach was tested on thin-sections (2.21×2.21 cm2) representing eight soils with different pore space configurations. The two-point probability and linear correlation functions were subsequently used as a part of simulated annealing optimization procedures to reconstruct soil structure. Comparison of original and reconstructed images was based on morphological characteristics, cluster correlation functions, total number of pores and pore-size distribution. Results showed excellent agreement for soils with isolated pores, but relatively poor correspondence for soils exhibiting dual-porosity features (i.e. superposition of pores and micro-cracks). Insufficient information content in the correlation function sets used for reconstruction may have contributed to the observed discrepancies. Improved reconstructions may be obtained by adding cluster and other correlation functions into reconstruction sets. Correlation functions and the associated stochastic reconstruction algorithms introduced here are universally applicable in soil science, such as for soil classification

  19. Pore REconstruction and Segmentation (PORES) method for improved porosity quantification of nanoporous materials

    Energy Technology Data Exchange (ETDEWEB)

    Van Eyndhoven, G., E-mail: geert.vaneyndhoven@uantwerpen.be [iMinds-Vision Lab, University of Antwerp, Universiteitsplein 1, B-2610 Wilrijk (Belgium); Kurttepeli, M. [EMAT, University of Antwerp, Groenenborgerlaan 171, B-2020 Antwerp (Belgium); Van Oers, C.J.; Cool, P. [Laboratory of Adsorption and Catalysis, University of Antwerp, Universiteitsplein 1, B-2610 Wilrijk (Belgium); Bals, S. [EMAT, University of Antwerp, Groenenborgerlaan 171, B-2020 Antwerp (Belgium); Batenburg, K.J. [iMinds-Vision Lab, University of Antwerp, Universiteitsplein 1, B-2610 Wilrijk (Belgium); Centrum Wiskunde and Informatica, Science Park 123, NL-1090 GB Amsterdam (Netherlands); Mathematical Institute, Universiteit Leiden, Niels Bohrweg 1, NL-2333 CA Leiden (Netherlands); Sijbers, J. [iMinds-Vision Lab, University of Antwerp, Universiteitsplein 1, B-2610 Wilrijk (Belgium)

    2015-01-15

    Electron tomography is currently a versatile tool to investigate the connection between the structure and properties of nanomaterials. However, a quantitative interpretation of electron tomography results is still far from straightforward. Especially accurate quantification of pore-space is hampered by artifacts introduced in all steps of the processing chain, i.e., acquisition, reconstruction, segmentation and quantification. Furthermore, most common approaches require subjective manual user input. In this paper, the PORES algorithm “POre REconstruction and Segmentation” is introduced; it is a tailor-made, integral approach, for the reconstruction, segmentation, and quantification of porous nanomaterials. The PORES processing chain starts by calculating a reconstruction with a nanoporous-specific reconstruction algorithm: the Simultaneous Update of Pore Pixels by iterative REconstruction and Simple Segmentation algorithm (SUPPRESS). It classifies the interior region to the pores during reconstruction, while reconstructing the remaining region by reducing the error with respect to the acquired electron microscopy data. The SUPPRESS reconstruction can be directly plugged into the remaining processing chain of the PORES algorithm, resulting in accurate individual pore quantification and full sample pore statistics. The proposed approach was extensively validated on both simulated and experimental data, indicating its ability to generate accurate statistics of nanoporous materials. - Highlights: • An electron tomography reconstruction/segmentation method for nanoporous materials. • The method exploits the porous nature of the scanned material. • Validated extensively on both simulation and real data experiments. • Results in increased image resolution and improved porosity quantification.

  20. Active pore space utilization in nanoporous carbon-based supercapacitors: Effects of conductivity and pore accessibility

    Science.gov (United States)

    Seredych, Mykola; Koscinski, Mikolaj; Sliwinska-Bartkowiak, Malgorzata; Bandosz, Teresa J.

    2012-12-01

    Composites of commercial graphene and nanoporous sodium-salt-polymer-derived carbons were prepared with 5 or 20 weight% graphene. The materials were characterized using the adsorption of nitrogen, SEM/EDX, thermal analysis, Raman spectroscopy and potentiometric titration. The samples' conductivity was also measured. The performance of the carbon composites in energy storage was linked to their porosity and electronic conductivity. The small pores (<0.7) were found as very active for double layer capacitance. It was demonstrated that when double layer capacitance is a predominant mechanism of charge storage, the degree of the pore space utilization for that storage can be increased by increasing the conductivity of the carbons. That active pore space utilization is defined as gravimetric capacitance per unit pore volume in pores smaller than 0.7 nm. Its magnitude is affected by conductivity of the carbon materials. The functional groups, besides pseudocapacitive contribution, increased the wettability and thus the degree of the pore space utilization. Graphene phase, owing to its conductivity, also took part in an insitu increase of the small pore accessibility and thus the capacitance of the composites via enhancing an electron transfer to small pores and thus imposing the reduction of groups blocking the pores for electrolyte ions.

  1. Phosphorus leaching in a soil textural gradient

    DEFF Research Database (Denmark)

    Glæsner, Nadia; Kjærgaard, Charlotte; Rubæk, Gitte Holton

    2009-01-01

    Texture is a major factor influencing mobilization and transport of P in soil owing partly to differences in adsorptive properties, and partly to differences in pore-size distribution and pore organization. Slurry application strategies may be important mitigation measures for reducing agricultur...

  2. Facial skin pores: a multiethnic study.

    Science.gov (United States)

    Flament, Frederic; Francois, Ghislain; Qiu, Huixia; Ye, Chengda; Hanaya, Tomoo; Batisse, Dominique; Cointereau-Chardon, Suzy; Seixas, Mirela Donato Gianeti; Dal Belo, Susi Elaine; Bazin, Roland

    2015-01-01

    Skin pores (SP), as they are called by laymen, are common and benign features mostly located on the face (nose, cheeks, etc) that generate many aesthetic concerns or complaints. Despite the prevalence of skin pores, related literature is scarce. With the aim of describing the prevalence of skin pores and anatomic features among ethnic groups, a dermatoscopic instrument, using polarized lighting, coupled to a digital camera recorded the major features of skin pores (size, density, coverage) on the cheeks of 2,585 women in different countries and continents. A detection threshold of 250 μm, correlated to clinical scorings by experts, was input into a specific software to further allow for automatic counting of the SP density (N/cm(2)) and determination of their respective sizes in mm(2). Integrating both criteria also led to establishing the relative part of the skin surface (as a percentage) that is actually covered by SP on cheeks. The results showed that the values of respective sizes, densities, and skin coverage: 1) were recorded in all studied subjects; 2) varied greatly with ethnicity; 3) plateaued with age in most cases; and 4) globally refected self-assessment by subjects, in particular those who self-declare having "enlarged pores" like Brazilian women. Inversely, Chinese women were clearly distinct from other ethnicities in having very low density and sizes. Analyzing the present results suggests that facial skin pore's morphology as perceived by human eye less result from functional criteria of associated appendages such as sebaceous glands. To what extent skin pores may be viewed as additional criteria of a photo-altered skin is an issue to be further addressed.

  3. An interdisciplinary approach towards improved understanding of soil deformation during compaction

    DEFF Research Database (Denmark)

    Keller, T.; Lamandé, Mathieu; Peth, S.

    2013-01-01

    and validation of new soil compaction models. The integration of concepts underlying dynamic processes that modify soil pore spaces and bulk properties will improve the understanding of how soil management affect vital soil mechanical, hydraulic and ecological functions supporting plant growth.......Soil compaction not only reduces available pore volume in which fluids are stored, but it alters the arrangement of soil constituents and pore geometry, thereby adversely impacting fluid transport and a range of soil ecological functions. Quantitative understanding of stress transmission...... and deformation processes in arable soils remains limited. Yet such knowledge is essential for better predictions of effects of soil management practices such as agricultural field traffic on soil functioning. Concepts and theory used in agricultural soil mechanics (soil compaction and soil tillage) are often...

  4. Pore-network model of evaporation-induced salt precipitation in porous media: The effect of correlations and heterogeneity

    Science.gov (United States)

    Dashtian, Hassan; Shokri, Nima; Sahimi, Muhammad

    2018-02-01

    Salt transport and precipitation in porous media constitute a set of complex and fascinating phenomena that are of considerable interest to several important problems, ranging from storage of CO2 in geological formations, to soil fertility, and protection of pavements and roads, as well as historical monuments. The phenomena occur at the pore scale and are greatly influenced by the heterogeneity of the pore space morphology. We present a pore-network (PN) model to study the phenomena. Vapor diffusion, capillary effect at the brine-vapor interface, flow of brine, and transport of salt and its precipitation in the pores that plug the pores partially or completely are all accounted for. The drying process is modeled by the invasion percolation, while transport of salt in brine is accounted for by the convective-diffusion equation. We demonstrate that the drying patterns, the clustering and connectivity of the pore throats in which salt precipitation occurs, the saturation distribution, and the drying rate are all strongly dependent upon the pore-size distribution, the correlations among the pore sizes, and the anisotropy of the pore space caused by stratification that most natural porous media contain. In particular, if the strata are more or less parallel to the direction of injection of the gas that dries out the pore space (air, for example) and/or causes salt precipitation (CO2, for example), the drying rate increases significantly. Moreover, salt tends to precipitate in clusters of neighboring pores that are parallel to the open surface of the porous medium.

  5. Estimation of Soil Water Retention Curve Using Fractal Dimension ...

    African Journals Online (AJOL)

    ADOWIE PERE

    2017-12-01

    Dec 1, 2017 ... ABSTRACT: The soil water retention curve (SWRC) is a fundamental hydraulic property majorly used to study flow transport in soils and calculate ... suitable to model the heterogeneous soil structure with tortuous pore space (Rieu ... so, soil texture determined according to the USDA texture classification.

  6. Relaxometry in soil science

    Science.gov (United States)

    Schaumann, G. E.; Jaeger, F.; Bayer, J. V.

    2009-04-01

    NMR relaxometry is a sensitive, informative and promising method to study pore size distribution in soils as well as many kinds of soil physicochemical processes, among which are wetting, swelling or changes in the macromolecular status. Further, it is a very helpful method to study interactions between molecules in soil organic matter and it can serve to study the state of binding of water or organic chemicals to soil organic matter. The method of Relaxometry excite the nuclei of interest and their relaxation kinetics are observed. The relaxation time is the time constant of this first order relaxation process. Most applications of relaxometry concentrate on protons, addressing water molecules or H-containing organic molecules. In this context, 1H-NMR relaxometry may be used as an analysis method to determine water uptake characteristics of soils, thus gaining information about water distribution and mobility as well as pore size distribution in wet and moist samples. Additionally, it can also serve as a tool to study mobility of molecular segments in biopolymers. Principally, relaxometry is not restricted to protons. In soil science, relaxometry is also applied using deuterium, xenon and other nuclei to study pore size distribution and interactions. The relaxation time depends on numerous parameters like surface relaxivity, diffusion and interactions between nuclei as well as between nuclei and the environment. One- and two-dimensional methods address the relation between relaxation time and diffusion coefficients and can give information about the interconnectivity of pores. More specific information can be gained using field cycling techniques. Although proton NMR relaxometry is a very promising method in soil science, it has been applied scarcely up to now. It was used to assess changes in molecular rigidity of humic substances. A very recent study shows the potential of NMR relaxometry to assess the pore size distribution of soils in a fast and non

  7. Pressure Jumps during Drainage in Macroporous Soils

    DEFF Research Database (Denmark)

    Soto, Diego; Paradelo Pérez, Marcos; Corral, A

    2018-01-01

    Tensiometer readings obtained at high resolution during drainage of structured soil columns revealed pressure jumps with long range correlations and burst sequences with a hierarchical structure. The statistical properties of jumps are similar to Haines jumps described in invasion percolation...... processes at pore scale, but they are much larger in amplitude and duration. Pressure jumps can result from transient redistribution of water potential in internal regions of soil and can be triggered during drainage by capillary displacements at the scale of structural pores....

  8. Using BIB-SEM to determine pore morphology and pore size distributions in coal macerals

    Energy Technology Data Exchange (ETDEWEB)

    Giffin, S.; Littke, R. [RWTH Aachen Univ. (Germany). Inst. of Geology and Geochemistry of Petroleum and Coal; Klaver, J.; Urai, J.L. [RWTH Aachen Univ. (Germany). Structural Geology, Tectonics and Geomechanics

    2013-08-01

    The composition of coalbeds is considerably heterogeneous, affecting the transport pathways for fluids within the coal. Transport pathways include cleats and larger pores. However, only a few clues exist as the nature of these pores. This study examines the morphology and distribution of macro- and mesopores in coal samples, using broad ion beam (BIB) milling to prepare relief- and damage-free polished surfaces of coal samples for high-resolution SEM imaging. Broad ion beam milling is advantageous to focused ion beam milling in that a larger surface area can be milled. Combining that with SEM imaging results in a useful tool to study pore morphology and distributions in the size range between 10 nm and 10 {mu}m. Since BIB-sections of a few square millimeters are not large enough to be statistically representative, results cannot be easily interpreted from a coal seam standpoint. Therefore, porosity was investigated as a function of maceral type to characterize pore morphologies. Macerals from the vitrinite and inertinite groups were selected with a known relationship to bedding. BIB-sections were milled parallel to bedding and perpendicular to bedding, and the pores were evaluated in each section. The goal of this study is to (1) qualitatively describe pore morphology with respect to maceral type and (2) quantitatively characterize pore size distributions with respect to maceral and in relationship to bedding. Our results lead to a better understanding of bulk coal porosity due to the visual, spatial representation and quantification of pores in individual macerals. (orig.)

  9. TIG Dressing Effects on Weld Pores and Pore Cracking of Titanium Weldments

    Directory of Open Access Journals (Sweden)

    Hui-Jun Yi

    2016-10-01

    Full Text Available Weld pores redistribution, the effectiveness of using tungsten inert gas (TIG dressing to remove weld pores, and changes in the mechanical properties due to the TIG dressing of Ti-3Al-2.5V weldments were studied. Moreover, weld cracks due to pores were investigated. The results show that weld pores less than 300 μm in size are redistributed or removed via remelting due to TIG dressing. Regardless of the temperature condition, TIG dressing welding showed ductility, and there was a loss of 7% tensile strength of the weldments. Additionally, it was considered that porosity redistribution by TIG dressing was due to fluid flow during the remelting of the weld pool. Weld cracks in titanium weldment create branch cracks around pores that propagate via the intragranular fracture, and oxygen is dispersed around the pores. It is suggested that the pore locations around the LBZ (local brittle zone and stress concentration due to the pores have significant effects on crack initiation and propagation.

  10. Moving Magnetic Features Around a Pore

    Energy Technology Data Exchange (ETDEWEB)

    Kaithakkal, A. J.; Riethmüller, T. L.; Solanki, S. K.; Lagg, A.; Barthol, P.; Gandorfer, A.; Gizon, L.; Hirzberger, J.; VanNoort, M. [Max Planck Institute for Solar System Research, Justus-von-Liebig-Weg 3, Göttingen D-37077 (Germany); Rodríguez, J. Blanco [Grupo de Astronomía y Ciencias del Espacio, Universidad de Valencia, E-46980 Paterna, Valencia (Spain); Iniesta, J. C. Del Toro; Suárez, D. Orozco [Instituto de Astrofísica de Andalucía (CSIC), Apartado de Correos 3004, E-18080 Granada (Spain); Schmidt, W. [Kiepenheuer-Institut für Sonnenphysik, Schöneckstr. 6, D-79104 Freiburg (Germany); Pillet, V. Martínez [National Solar Observatory, 3665 Discovery Drive, Boulder, CO 80303 (United States); Knölker, M., E-mail: anjali@mps.mpg.de [High Altitude Observatory, National Center for Atmospheric Research, P.O. Box 3000, Boulder, CO 80307-3000 (United States)

    2017-03-01

    Spectropolarimetric observations from Sunrise/IMaX, obtained in 2013 June, are used for a statistical analysis to determine the physical properties of moving magnetic features (MMFs) observed near a pore. MMFs of the same and opposite polarity, with respect to the pore, are found to stream from its border at an average speed of 1.3 km s{sup −1} and 1.2 km s{sup −1}, respectively, with mainly same-polarity MMFs found further away from the pore. MMFs of both polarities are found to harbor rather weak, inclined magnetic fields. Opposite-polarity MMFs are blueshifted, whereas same-polarity MMFs do not show any preference for up- or downflows. Most of the MMFs are found to be of sub-arcsecond size and carry a mean flux of ∼1.2 × 10{sup 17} Mx.

  11. Restoring Soil Quality to Mitigate Soil Degradation

    Directory of Open Access Journals (Sweden)

    Rattan Lal

    2015-05-01

    Full Text Available Feeding the world population, 7.3 billion in 2015 and projected to increase to 9.5 billion by 2050, necessitates an increase in agricultural production of ~70% between 2005 and 2050. Soil degradation, characterized by decline in quality and decrease in ecosystem goods and services, is a major constraint to achieving the required increase in agricultural production. Soil is a non-renewable resource on human time scales with its vulnerability to degradation depending on complex interactions between processes, factors and causes occurring at a range of spatial and temporal scales. Among the major soil degradation processes are accelerated erosion, depletion of the soil organic carbon (SOC pool and loss in biodiversity, loss of soil fertility and elemental imbalance, acidification and salinization. Soil degradation trends can be reversed by conversion to a restorative land use and adoption of recommended management practices. The strategy is to minimize soil erosion, create positive SOC and N budgets, enhance activity and species diversity of soil biota (micro, meso, and macro, and improve structural stability and pore geometry. Improving soil quality (i.e., increasing SOC pool, improving soil structure, enhancing soil fertility can reduce risks of soil degradation (physical, chemical, biological and ecological while improving the environment. Increasing the SOC pool to above the critical level (10 to 15 g/kg is essential to set-in-motion the restorative trends. Site-specific techniques of restoring soil quality include conservation agriculture, integrated nutrient management, continuous vegetative cover such as residue mulch and cover cropping, and controlled grazing at appropriate stocking rates. The strategy is to produce “more from less” by reducing losses and increasing soil, water, and nutrient use efficiency.

  12. Linking Intra-Aggregate Pore Size Distribution with Organic Matter Decomposition Status, Evidence from FTIR and X-Ray Tomography

    Science.gov (United States)

    Toosi, E. R.; Quigley, M.; Kravchenko, A. N.

    2014-12-01

    It has been reported that conversion of intensively cultivated lands to less disturbed systems enhances soil OM storage capacity, primarily through OM stabilization in macroaggregates. We hypothesized that the potential for OM stabilization inside macro-aggregates is influenced by presence and abundance of intra-aggregate pores. Pores determine microbial access to OM and regulate diffusion of solution/gases within aggregates which drives microbial functioning. We investigated the influence of longterm disturbance intensity on soil OM composition and its relation to pore size distribution within macroaggregates. We used quantitative FTIR to determine OM decomposition status and X-ray micro-tomography to assess pore size distribution in macroaggregates as affected by management and landuse. Macroaggregates 4-6 mm in size where selected from topsoil under long term conventional tillage (CT), cover-crop (CC), and native succession vegetation (NS) treatments at Kellogg Biological Station, Michigan. Comparison of main soil OM functional groups suggested that with increasing disturbance intensity, the proportion of aromatic and carboxylic/carbohydrates associated compounds increased and it was concomitant with a decrease in the proportion of aliphatic associated compounds and lignin derivatives. Further, FTIR-based decomposition indices revealed that overall decomposition status of macroaggregates followed the pattern of CT > CC ≈ NS. X-ray micro-tomography findings suggested that greater OM decomposition within the macroaggregates was associated with i) greater percent of pores >13 micron in size within the aggregates, as well as ii) greater proportion of small to medium pores (13-110 micron). The results develop previous findings, suggesting that shift in landuse or management indirectly affects soil OM stabilization through alteration of pore size distribution within macroaggregates that itself, is coupled with OM decomposition status.

  13. Nuclear pore complex tethers to the cytoskeleton.

    Science.gov (United States)

    Goldberg, Martin W

    2017-08-01

    The nuclear envelope is tethered to the cytoskeleton. The best known attachments of all elements of the cytoskeleton are via the so-called LINC complex. However, the nuclear pore complexes, which mediate the transport of soluble and membrane bound molecules, are also linked to the microtubule network, primarily via motor proteins (dynein and kinesins) which are linked, most importantly, to the cytoplasmic filament protein of the nuclear pore complex, Nup358, by the adaptor BicD2. The evidence for such linkages and possible roles in nuclear migration, cell cycle control, nuclear transport and cell architecture are discussed. Copyright © 2017. Published by Elsevier Ltd.

  14. Mesoscale Simulations of Pore Migration in a Nuclear Fuel

    International Nuclear Information System (INIS)

    Radhakrishnan, Balasubramaniam; Gorti, Sarma B.

    2010-01-01

    The evolution of pore and grain structure in a nuclear fuel environment is strongly influenced by the local temperature, and the temperature gradient. The evolution of pore and grain structure in an externally imposed temperature gradient is simulated for a hypothetical material using a Potts model approach that allows for porosity migration by mechanisms similar to surface, grain boundary and volume diffusion, as well as the interaction of migrating pores with stationary grain boundaries. First, the migration of a single pore in a single crystal in the presence of the temperature gradient is simulated. Next, the interaction of a pore moving in a temperature gradient with a grain boundary that is perpendicular to the pore migration direction is simulated in order to capture the force exerted by the pore on the grain boundary. The simulations reproduce the expected variation of pore velocity with pore size as well as the variation of the grain boundary force with pore size.

  15. Dissolution at porous interfaces VI: Multiple pore systems.

    Science.gov (United States)

    Grijseels, H; Crommelin, D J; De Blaey, C J

    1984-12-01

    With the aid of rapidly dissolving sodium chloride particles, cubic pores were made in the surface of a theophylline tablet. The influence of the pores on the dissolution rate of the surface was investigated in a rotating disk apparatus. Like the drilled pores used in earlier studies, downstream on the surface they caused a turbulent flow regimen with the development of a trough due to enhanced erosion. The phenomenon of a critical pore diameter, discovered with single, drilled pores, seems to be applicable to the cubic pores investigated in this study, although a higher degree of surface coverage with pores caused complications, probably due to particles bordering one another and forming larger pores. The behavior of the porous surfaces at different rotation speeds was studied. Due to the presence of pores the laminar character of the boundary layer flow changes to turbulent, which induces locally an increased dissolution flux in the wake of a pore.

  16. A pore-size classification for peat bogs derived from unsaturated hydraulic properties

    Science.gov (United States)

    Weber, Tobias Karl David; Iden, Sascha Christian; Durner, Wolfgang

    2017-12-01

    In ombrotrophic peatlands, the moisture content of the acrotelm (vadoze zone) controls oxygen diffusion rates, redox state, and the turnover of organic matter. Thus, variably saturated flow processes determine whether peatlands act as sinks or sources of atmospheric carbon, and modelling these processes is crucial to assess effects of changed environmental conditions on the future development of these ecosystems. We show that the Richards equation can be used to accurately describe the moisture dynamics under evaporative conditions in variably saturated peat soil, encompassing the transition from the topmost living moss layer to the decomposed peat as part of the vadose zone. Soil hydraulic properties (SHP) were identified by inverse simulation of evaporation experiments on samples from the entire acrotelm. To obtain consistent descriptions of the observations, the traditional van Genuchten-Mualem model was extended to account for non-capillary water storage and flow. We found that the SHP of the uppermost moss layer reflect a pore-size distribution (PSD) that combines three distinct pore systems of the Sphagnum moss. For deeper samples, acrotelm pedogenesis changes the shape of the SHP due to the collapse of inter-plant pores and an infill with smaller particles. This leads to gradually more homogeneous and bi-modal PSDs with increasing depth, which in turn can serve as a proxy for increasing state of pedogenesis in peatlands. From this, we derive a nomenclature and size classification for the pore spaces of Sphagnum mosses and define inter-, intra-, and inner-plant pore spaces, with effective pore diameters of > 300, 300-30, and 30-10 µm, respectively.

  17. A pore-size classification for peat bogs derived from unsaturated hydraulic properties

    Directory of Open Access Journals (Sweden)

    T. K. D. Weber

    2017-12-01

    Full Text Available In ombrotrophic peatlands, the moisture content of the acrotelm (vadoze zone controls oxygen diffusion rates, redox state, and the turnover of organic matter. Thus, variably saturated flow processes determine whether peatlands act as sinks or sources of atmospheric carbon, and modelling these processes is crucial to assess effects of changed environmental conditions on the future development of these ecosystems. We show that the Richards equation can be used to accurately describe the moisture dynamics under evaporative conditions in variably saturated peat soil, encompassing the transition from the topmost living moss layer to the decomposed peat as part of the vadose zone. Soil hydraulic properties (SHP were identified by inverse simulation of evaporation experiments on samples from the entire acrotelm. To obtain consistent descriptions of the observations, the traditional van Genuchten–Mualem model was extended to account for non-capillary water storage and flow. We found that the SHP of the uppermost moss layer reflect a pore-size distribution (PSD that combines three distinct pore systems of the Sphagnum moss. For deeper samples, acrotelm pedogenesis changes the shape of the SHP due to the collapse of inter-plant pores and an infill with smaller particles. This leads to gradually more homogeneous and bi-modal PSDs with increasing depth, which in turn can serve as a proxy for increasing state of pedogenesis in peatlands. From this, we derive a nomenclature and size classification for the pore spaces of Sphagnum mosses and define inter-, intra-, and inner-plant pore spaces, with effective pore diameters of >  300, 300–30, and 30–10 µm, respectively.

  18. Spectral element modelling of seismic wave propagation in visco-elastoplastic media including excess-pore pressure development

    Science.gov (United States)

    Oral, Elif; Gélis, Céline; Bonilla, Luis Fabián; Delavaud, Elise

    2017-12-01

    Numerical modelling of seismic wave propagation, considering soil nonlinearity, has become a major topic in seismic hazard studies when strong shaking is involved under particular soil conditions. Indeed, when strong ground motion propagates in saturated soils, pore pressure is another important parameter to take into account when successive phases of contractive and dilatant soil behaviour are expected. Here, we model 1-D seismic wave propagation in linear and nonlinear media using the spectral element numerical method. The study uses a three-component (3C) nonlinear rheology and includes pore-pressure excess. The 1-D-3C model is used to study the 1987 Superstition Hills earthquake (ML 6.6), which was recorded at the Wildlife Refuge Liquefaction Array, USA. The data of this event present strong soil nonlinearity involving pore-pressure effects. The ground motion is numerically modelled for different assumptions on soil rheology and input motion (1C versus 3C), using the recorded borehole signals as input motion. The computed acceleration-time histories show low-frequency amplification and strong high-frequency damping due to the development of pore pressure in one of the soil layers. Furthermore, the soil is found to be more nonlinear and more dilatant under triaxial loading compared to the classical 1C analysis, and significant differences in surface displacements are observed between the 1C and 3C approaches. This study contributes to identify and understand the dominant phenomena occurring in superficial layers, depending on local soil properties and input motions, conditions relevant for site-specific studies.

  19. Change of microstructure of clays due to the presence of heavy metal ions in pore water

    Directory of Open Access Journals (Sweden)

    Saiyouri N.

    2010-06-01

    Full Text Available The compressibility of engineered barrier clays is, to a large extent, controlled by microstructure change due to the presence of chemical ions in clay-water system. This paper aims to investigate the change of microstructure of clays due to the presence of heavy metal ions in pore water. We use two pure clays (kaolinite and bentonite in the study. One-dimensional consolidation tests were performed on reconstituted samples, which are prepared with distilled water and three types of heavy metal solutions (Pb(NO32, Cu(NO32, Zn(NO32,. In order to better understand the impact of chemical pore fluid on microstructure of the two clays, following the consolidation test, scanning electron microscope (SEM observations and mercury intrusion pore size distribution measurements (MIP were conducted. Due to the measurement range of MIP, which is only allowed to measure the minimal pore size 20 Å, BET method by gas sorption, whose measurement pore size range is from 3.5 Å to 500 Å, is used to measure the micropore size distribution. By this method, specific surface area of the soils can be also determined. It can be employed to demonstrate the difference of creep performance between the soils. Furthermore, a series of batch equilibrium tests were conducted to better understand the physical-chemical interactions between the particles of soils and the heavy metal ions. With the further consideration of the interparticle electrical attractive and repulsive force, an attempt has been made to predict the creep behaviour by using the modified Gouy-Chapman double layer theory. The results of calculation were compared with that of tests. The comparison shows that the prediction of compressibility of the clays according to the modified double diffuse layer theory can be reasonably agreement with the experimental data.

  20. Impact of Soil Texture on Soil Ciliate Communities

    Science.gov (United States)

    Chau, J. F.; Brown, S.; Habtom, E.; Brinson, F.; Epps, M.; Scott, R.

    2014-12-01

    Soil water content and connectivity strongly influence microbial activities in soil, controlling access to nutrients and electron acceptors, and mediating interactions between microbes within and between trophic levels. These interactions occur at or below the pore scale, and are influenced by soil texture and structure, which determine the microscale architecture of soil pores. Soil protozoa are relatively understudied, especially given the strong control they exert on bacterial communities through predation. Here, ciliate communities in soils of contrasting textures were investigated. Two ciliate-specific primer sets targeting the 18S rRNA gene were used to amplify DNA extracted from eight soil samples collected from Sumter National Forest in western South Carolina. Primer sets 121F-384F-1147R (semi-nested) and 315F-959R were used to amplify soil ciliate DNA via polymerase chain reaction (PCR), and the resulting PCR products were analyzed by gel electrophoresis to obtain quantity and band size. Approximately two hundred ciliate 18S rRNA sequences were obtained were obtained from each of two contrasting soils. Sequences were aligned against the NCBI GenBank database for identification, and the taxonomic classification of best-matched sequences was determined. The ultimate goal of the work is to quantify changes in the ciliate community under short-timescale changes in hydrologic conditions for varying soil textures, elucidating dynamic responses to desiccation stress in major soil ciliate taxa.

  1. Capillary pressure across a pore throat in the presence of surfactants

    KAUST Repository

    Jang, Junbong

    2016-11-22

    Capillarity controls the distribution and transport of multiphase and immiscible fluids in soils and fractured rocks; therefore, capillarity affects the migration of nonaqueous contaminants and remediation strategies for both LNAPLs and DNAPLs, constrains gas and oil recovery, and regulates CO2 injection and geological storage. Surfactants alter interfacial tension and modify the invasion of pores by immiscible fluids. Experiments are conducted to explore the propagation of fluid interfaces along cylindrical capillary tubes and across pore constrictions in the presence of surfactants. Measured pressure signatures reflect the interaction between surface tension, contact angle, and the pore geometry. Various instabilities occur as the interface traverses the pore constriction, consequently, measured pressure signatures differ from theoretical trends predicted from geometry, lower capillary pressures are generated in advancing wetting fronts, and jumps are prone to under-sampling. Contact angle and instabilities are responsible for pronounced differences between pressure signatures recorded during advancing and receding tests. Pressure signatures gathered with surfactant solutions suggest changes in interfacial tension at the constriction; the transient surface tension is significantly lower than the value measured in quasi-static conditions. Interface stiffening is observed during receding fronts for solutions near the critical micelle concentration. Wetting liquids tend to form plugs at pore constrictions after the invasion of a nonwetting fluid; plugs split the nonwetting fluid into isolated globules and add resistance against fluid flow.

  2. Capillary Condensation in Pores with Rough Walls:

    Czech Academy of Sciences Publication Activity Database

    Bryk, P.; Rżysko, W.; Malijevský, Alexandr; Sokołowski, S.

    2007-01-01

    Roč. 313, č. 1 (2007), s. 41-52 ISSN 0021-9797 Grant - others:TOK(XE) 509249 Institutional research plan: CEZ:AV0Z40720504 Source of funding: R - rámcový projekt EK Keywords : adsorption * pore * capillary condensation Subject RIV: CF - Physical ; Theoretical Chemistry Impact factor: 2.309, year: 2007

  3. Mimicking the nuclear pore complex using nanopores

    NARCIS (Netherlands)

    Ananth, A.N.

    2018-01-01

    Nuclear pore complexes acts as a gatekeeper for molecular transport between the nucleus and the cytoplasm in eukaryotic cells. The central NPC channel is filled with intrinsically disordered FG domains (phenylalanine (F), glycine (G)) that are responsible for the fascinating selectivity of NPCs, for

  4. Induction of nano pore in Agrobacterial hemoglobin

    Directory of Open Access Journals (Sweden)

    Mojtaba Tousheh

    2014-01-01

    Full Text Available Introduction: A variety of oxygen-transport and -binding proteins exist in organisms including bacteria, protozoans, and fungi all have hemoglobin-like proteins. In addition to dealing with transport and sensing of oxygen, they may also deal with NO2, CO2, sulfide compounds, and even O2 scavenging in environments. Also they detoxified chlorinated materials like P450 enzymes and peroxidases and use as a detector of nitrate and hydrogen peroxide. Pore-forming bacterial globins are interested for filtration. Materials and methods: Although there are data for bacterial toxin as a filter, here we used Agrobacterial hem to induce nano pore in the heme structure using point mutation. Results: Investigations showed that three amino acids leucine 76, alanine 83 and histidine 80 are important for pore formation in Agrobacterium hemoglobin. A point mutation on leucine 76 to glycine, histidine 80 to asparagine and alanine 83 to lysine step by step led to create the nano pore 0.7- 0.8 nm in the globin. Discussion and conclusion: These mutations in bacterial hemoglobin increase the stability when mutation is with it’s at pH7. This mutation decreases the aliphatic index however increase the stability index.

  5. Percolation theory and its application for interpretation of soil water retention curves

    International Nuclear Information System (INIS)

    Kodesova, R.

    2004-01-01

    The soil porous system has traditionally been deduced from the soil-water retention curve with the assumption of homogeneity and free accessibility of pores, defined as capillary tubes, from the sink/source of water. But real soil fabric is mostly characterized by aggregates. In this case, the soil porous system cannot be modeled as a homogeneous one. To examine the differences between homogeneous and heterogeneous soil porous systems, we studied two types of soils: sandy soil and coarse sandy soil. We applied image processing filters and the ARC/INFO Grid module to analyze pore sizes in both soils from their electron microscope images taken at two different magnifications. We used the resulting pore-size distribution data to generate 3-D porous media consisting of pores and throats. The homogeneous pore structure was created as a mono-modal pore-throat network with one pore-size distribution. The heterogeneous pore structure was designed as a bi-modal pore-throat network with two pore-size distributions, where the pore sizes were hierarchically arranged in the nodes of the network. We applied the percolation model to simulate water and air displacement in these networks. The distribution of water in the nodes of the networks was studied increasing/decreasing steps of pressure head and the drainage and wetting branches of the retention curves were evaluated. The soil-water retention curves modeled for the mono-modal and bi-modal porous systems had different characters. The simulated shape of the retention curve in the mono-modal case was close to the step-like form of a retention curve characteristic of unstructured soil. The shape of the simulated retention curve in the bi-modal case was smoother, more gradual, and closer to the shape of the retention curve of a real, structured soil. (author)

  6. X-ray pore optic developments

    Science.gov (United States)

    Wallace, Kotska; Bavdaz, Marcos; Collon, Maximilien; Beijersbergen, Marco; Kraft, Stefan; Fairbend, Ray; Séguy, Julien; Blanquer, Pascal; Graue, Roland; Kampf, Dirk

    2017-11-01

    In support of future x-ray telescopes ESA is developing new optics for the x-ray regime. To date, mass and volume have made x-ray imaging technology prohibitive to planetary remote sensing imaging missions. And although highly successful, the mirror technology used on ESA's XMM-Newton is not sufficient for future, large, x-ray observatories, since physical limits on the mirror packing density mean that aperture size becomes prohibitive. To reduce telescope mass and volume the packing density of mirror shells must be reduced, whilst maintaining alignment and rigidity. Structures can also benefit from a modular optic arrangement. Pore optics are shown to meet these requirements. This paper will discuss two pore optic technologies under development, with examples of results from measurement campaigns on samples. One activity has centred on the use of coated, silicon wafers, patterned with ribs, that are integrated onto a mandrel whose form has been polished to the required shape. The wafers follow the shape precisely, forming pore sizes in the sub-mm region. Individual stacks of mirrors can be manufactured without risk to, or dependency on, each other and aligned in a structure from which they can also be removed without hazard. A breadboard is currently being built to demonstrate this technology. A second activity centres on glass pore optics. However an adaptation of micro channel plate technology to form square pores has resulted in a monolithic material that can be slumped into an optic form. Alignment and coating of two such plates produces an x-ray focusing optic. A breadboard 20cm aperture optic is currently being built.

  7. Soil physical land degradation processes

    Science.gov (United States)

    Horn, Rainer

    2017-04-01

    According to the European Soil Framework Directive (2006) soil compaction is besides water and wind erosion one of the main physical reasons and threats of soil degradation. It is estimated, that 32% of the subsoils in Europe are highly degraded and 18% moderately vulnerable to compaction. The problem is not limited to crop land or forest areas (especially because of non-site adjusted harvesting machines) but is also prevalent in rangelands and grassland, and even in so called natural non-disturbed systems. The main reasons for an intense increase in compacted agricultural or forested regions are the still increasing masses of the machines as well the increased frequency of wheeling under non favorable site conditions. Shear and vibration induced soil deformation enhances the deterioration of soil properties especially if the soil water content is very high and the internal soil strength very low. The same is true for animal trampling in combination with overgrazing of moist to wet pastures which subsequently causes a denser (i.e. reduced proportion of coarse pores with smaller continuity) but still structured soil horizons and will finally end in a compacted platy structure. In combination with high water content and shearing due to trampling therefore results in a complete muddy homogeneous soil with no structure at all. (Krümmelbein et al. 2013) Site managements of arable, forestry or horticulture soils requires a sufficiently rigid pore system which guarantees water, gas and heat exchange, nutrient transport and adsorption as well as an optimal rootability in order to avoid subsoil compaction. Such pore system also guarantees a sufficient microbial activity and composition in order to also decompose the plant etc. debris. It is therefore essential that well structured horizons dominate in soils with at best subangular blocky structure or in the top A- horizons a crumbly structure due to biological activity. In contrast defines the formation of a platy

  8. High Energy Moisture Characteristics: Linking Between Soil Physical Processes and Structure Stability

    Science.gov (United States)

    Water storage and flow in soils is usually complicated by the intricate nature of and changes in soil pore size distribution (PSD) due to modifications in soil structure following changes in agricultural management. The paper presents the Soil High Energy Moisture Characteristic (Soil-HEMC) method f...

  9. Dynamics of snap-off and pore-filling events during two-phase fluid flow in permeable media.

    Science.gov (United States)

    Singh, Kamaljit; Menke, Hannah; Andrew, Matthew; Lin, Qingyang; Rau, Christoph; Blunt, Martin J; Bijeljic, Branko

    2017-07-12

    Understanding the pore-scale dynamics of two-phase fluid flow in permeable media is important in many processes such as water infiltration in soils, oil recovery, and geo-sequestration of CO 2 . The two most important processes that compete during the displacement of a non-wetting fluid by a wetting fluid are pore-filling or piston-like displacement and snap-off; this latter process can lead to trapping of the non-wetting phase. We present a three-dimensional dynamic visualization study using fast synchrotron X-ray micro-tomography to provide new insights into these processes by conducting a time-resolved pore-by-pore analysis of the local curvature and capillary pressure. We show that the time-scales of interface movement and brine layer swelling leading to snap-off are several minutes, orders of magnitude slower than observed for Haines jumps in drainage. The local capillary pressure increases rapidly after snap-off as the trapped phase finds a position that is a new local energy minimum. However, the pressure change is less dramatic than that observed during drainage. We also show that the brine-oil interface jumps from pore-to-pore during imbibition at an approximately constant local capillary pressure, with an event size of the order of an average pore size, again much smaller than the large bursts seen during drainage.

  10. Pore Water Extraction Test Near 241-SX Tank Farm at the Hanford Site, Washington, USA

    International Nuclear Information System (INIS)

    Eberlein, Susan J.; Parker, Danny L.; Tabor, Cynthia L.; Holm, Melissa J.

    2013-01-01

    A proof-of-principle test is underway near the Hanford Site 241-SX Tank Farm. The test will evaluate a potential remediation technology that will use tank farm-deployable equipment to remove contaminated pore water from vadose zone soils. The test system was designed and built to address the constraints of working within a tank farm. Due to radioactive soil contamination and limitations in drilling near tanks, small-diameter direct push drilling techniques applicable to tank farms are being utilized for well placement. To address space and weight limitations in working around tanks and obstacles within tank farms, the above ground portions of the test system have been constructed to allow deployment flexibility. The test system utilizes low vacuum over a sealed well screen to establish flow into an extraction well. Extracted pore water is collected in a well sump,and then pumped to the surface using a small-diameter bladder pump.If pore water extraction using this system can be successfully demonstrated, it may be possible to target local contamination in the vadose zone around underground storage tanks. It is anticipated that the results of this proof-of-principle test will support future decision making regarding interim and final actions for soil contamination within the tank farms

  11. The equivalent pore aspect ratio as a tool for pore type prediction in carbonate reservoirs

    OpenAIRE

    FOURNIER , François; Pellerin , Matthieu; Villeneuve , Quentin; Teillet , Thomas; Hong , Fei; Poli , Emmanuelle; Borgomano , Jean; Léonide , Philippe; Hairabian , Alex

    2018-01-01

    International audience; The equivalent pore aspect ratios (EPAR) provide a tool to detect pore types by combining P-and S-wave velocities, porosity, bulk density and mineralogical composition of carbonate rocks. The integration of laboratory measurements, well log data and petrographic analysis of 468 carbonate samples from various depositional and diagenetic settings (Lower Cretaceous pre-salt non-marine carbonates from offshore Brazil, Lower Cretaceous shallow-water platform carbonates from...

  12. Quicklime-induced changes of soil properties: Implications for enhanced remediation of volatile chlorinated hydrocarbon contaminated soils via mechanical soil aeration.

    Science.gov (United States)

    Ma, Yan; Dong, Binbin; He, Xiaosong; Shi, Yi; Xu, Mingyue; He, Xuwen; Du, Xiaoming; Li, Fasheng

    2017-04-01

    Mechanical soil aeration is used for soil remediation at sites contaminated by volatile organic compounds. However, the effectiveness of the method is limited by low soil temperature, high soil moisture, and high soil viscosity. Combined with mechanical soil aeration, quicklime has a practical application value related to reinforcement remediation and to its action in the remediation of soil contaminated with volatile organic compounds. In this study, the target pollutant was trichloroethylene, which is a volatile chlorinated hydrocarbon pollutant commonly found in contaminated soils. A restoration experiment was carried out, using a set of mechanical soil-aeration simulation tests, by adding quicklime (mass ratios of 3, 10, and 20%) to the contaminated soil. The results clearly indicate that quicklime changed the physical properties of the soil, which affected the environmental behaviour of trichloroethylene in the soil. The addition of CaO increased soil temperature and reduced soil moisture to improve the mass transfer of trichloroethylene. In addition, it improved the macroporous cumulative pore volume and average pore size, which increased soil permeability. As soil pH increased, the clay mineral content in the soils decreased, the cation exchange capacity and the redox potential decreased, and the removal of trichloroethylene from the soil was enhanced to a certain extent. After the addition of quicklime, the functional group COO of soil organic matter could interact with calcium ions, which increased soil polarity and promoted the removal of trichloroethylene. Copyright © 2017 Elsevier Ltd. All rights reserved.

  13. Enhancement of plasma generation in catalyst pores with different shapes

    Science.gov (United States)

    Zhang, Yu-Ru; Neyts, Erik C.; Bogaerts, Annemie

    2018-05-01

    Plasma generation inside catalyst pores is of utmost importance for plasma catalysis, as the existence of plasma species inside the pores affects the active surface area of the catalyst available to the plasma species for catalytic reactions. In this paper, the electric field enhancement, and thus the plasma production inside catalyst pores with different pore shapes is studied with a two-dimensional fluid model. The results indicate that the electric field will be significantly enhanced near tip-like structures. In a conical pore with small opening, the strongest electric field appears at the opening and bottom corners of the pore, giving rise to a prominent ionization rate throughout the pore. For a cylindrical pore, the electric field is only enhanced at the bottom corners of the pore, with lower absolute value, and thus the ionization rate inside the pore is only slightly enhanced. Finally, in a conical pore with large opening, the electric field is characterized by a maximum at the bottom of the pore, yielding a similar behavior for the ionization rate. These results demonstrate that the shape of the pore has a significantly influence on the electric field enhancement, and thus modifies the plasma properties.

  14. Pores and Void in Asclepiades’ Physical Theory

    Science.gov (United States)

    Leith, David

    2012-01-01

    This paper examines a fundamental, though relatively understudied, aspect of the physical theory of the physician Asclepiades of Bithynia, namely his doctrine of pores. My principal thesis is that this doctrine is dependent on a conception of void taken directly from Epicurean physics. The paper falls into two parts: the first half addresses the evidence for the presence of void in Asclepiades’ theory, and concludes that his conception of void was basically that of Epicurus; the second half focuses on the precise nature of Asclepiadean pores, and seeks to show that they represent void interstices between the primary particles of matter which are the constituents of the human body, and are thus exactly analogous to the void interstices between atoms within solid objects in Epicurus’ theory. PMID:22984299

  15. Soil properties from seismic intrinsic dispersion

    NARCIS (Netherlands)

    Zhubayev, A.S.

    2014-01-01

    Theoretical and experimental studies in the past have shown the sensitivity of seismic waves to soil/rock properties, such as composition, porosity, pore fluid, and permeability. However, quantitative characterization of these properties has remained challenging. In case of unconsolidated soils, the

  16. Morphological studies of some cultivated soils

    NARCIS (Netherlands)

    Slager, S.

    1966-01-01

    A study was made of those morphological and physical soil properties considered to govern root development.

    A deep and wide-branched root system was shown only to develop in a soil containing a permanent heterogeneous pore system, formed by biological activity in the profile. Therefore a

  17. Facial skin pores: a multiethnic study

    Directory of Open Access Journals (Sweden)

    Flament F

    2015-02-01

    Full Text Available Frederic Flament,1 Ghislain Francois,1 Huixia Qiu,2 Chengda Ye,2 Tomoo Hanaya,3 Dominique Batisse,3 Suzy Cointereau-Chardon,1 Mirela Donato Gianeti Seixas,4 Susi Elaine Dal Belo,4 Roland Bazin5 1Department of Applied Research and Development, L’Oreal Research and Innovation, Paris, France; 2Department of Applied Research and Development, L’Oreal Research and Innovation, Shanghai, People’s Republic of China; 3Department of Applied Research and Development, L’Oreal Research and Innovation, Tokyo, Japan; 4Department of Applied Research and Development, L’Oreal Research and Innovation, Rio de Janeiro, Brazil; 5RB Consult, Bievres, France Abstract: Skin pores (SP, as they are called by laymen, are common and benign features mostly located on the face (nose, cheeks, etc that generate many aesthetic concerns or complaints. Despite the prevalence of skin pores, related literature is scarce. With the aim of describing the prevalence of skin pores and anatomic features among ethnic groups, a dermatoscopic instrument, using polarized lighting, coupled to a digital camera recorded the major features of skin pores (size, density, coverage on the cheeks of 2,585 women in different countries and continents. A detection threshold of 250 µm, correlated to clinical scorings by experts, was input into a specific software to further allow for automatic counting of the SP density (N/cm2 and determination of their respective sizes in mm2. Integrating both criteria also led to establishing the relative part of the skin surface (as a percentage that is actually covered by SP on cheeks. The results showed that the values of respective sizes, densities, and skin coverage: 1 were recorded in all studied subjects; 2 varied greatly with ethnicity; 3 plateaued with age in most cases; and 4 globally reflected self-assessment by subjects, in particular those who self-declare having “enlarged pores” like Brazilian women. Inversely, Chinese women were clearly

  18. Influence of pore size distributions on decomposition of maize leaf residue: evidence from X-ray computed micro-tomography

    Science.gov (United States)

    Negassa, Wakene; Guber, Andrey; Kravchenko, Alexandra; Rivers, Mark

    2014-05-01

    Soil's potential to sequester carbon (C) depends not only on quality and quantity of organic inputs to soil but also on the residence time of the applied organic inputs within the soil. Soil pore structure is one of the main factors that influence residence time of soil organic matter by controlling gas exchange, soil moisture and microbial activities, thereby soil C sequestration capacity. Previous attempts to investigate the fate of organic inputs added to soil did not allow examining their decomposition in situ; the drawback that can now be remediated by application of X-ray computed micro-tomography (µ-CT). The non-destructive and non-invasive nature of µ-CT gives an opportunity to investigate the effect of soil pore size distributions on decomposition of plant residues at a new quantitative level. The objective of this study is to examine the influence of pore size distributions on the decomposition of plant residue added to soil. Samples with contrasting pore size distributions were created using aggregate fractions of five different sizes (pieces of maize leaves 2.5 mg in size (equivalent to 1.71 mg C g-1 soil) were added to half of the studied samples. Samples with and without maize leaves were incubated for 120 days. CO2 emission from the samples was measured at regular time intervals. In order to ensure that the observed differences are due to differences in pore structure and not due to differences in inherent properties of the studied aggregate fractions, we repeated the whole experiment using soil from the same aggregate size fractions but ground to six replicated samples were used for intact and ground samples of all sizes with and without leaves. Two replications of the intact aggregate fractions of all sizes with leaves were subjected to µ-CT scanning before and after incubation, whereas all the remaining replications of both intact and ground aggregate fractions of <0.05, 0.05-0.1, and 1.0-2.0 mm sizes with leaves were scanned with µ-CT after

  19. Radial distribution of ions in pores with a surface charge

    NARCIS (Netherlands)

    Stegen, J.H.G. van der; Görtzen, J.; Kuipers, J.A.M.; Hogendoorn, J.A.; Versteeg, G.F.

    2001-01-01

    A sorption model applicable to calculate the radial equilibrium concentrations of ions in the pores of ion-selective membranes with a pore structure is developed. The model is called the radial uptake model. Because the model is applied to a Nafion sulfonic layer with very small pores and the radial

  20. The Effect of the Degree of Luminal Contrast-Enhancement on CT Measurement of Plaque Size: A Comparison with T1-weighted Magnetic Resonance Imaging

    International Nuclear Information System (INIS)

    Choi, Byoung Wook; Hur, Jin; Lee, Hye Jeong; Kim, Young Jin; Choe, Kyu Ok; Kim, Tae Hoon

    2010-01-01

    We studied early and delayed contrast-enhanced CT to determine the effects of the degree of luminal enhancement on the measurement of plaque size compared to T1-weighted MRI. T1-weighted MRI and a two-phase contrast-enhanced CT was performed in 5 New Zealand white rabbits with atherosclerosis. Early-phase images were acquired during an expected peak enhancement period of the lumen; delayed-phase images were acquired 240 sec after administration of the contrast media. Anteroposterior and lateral luminal diameters (APD, LD), luminal area (LA), total vessel area (TVA), and plaque area (PA) of the aorta were measured on MRI and CT, respectively and compared to each other. A total of 78 slices of the aorta were analyzed. PA, measured on T1-weighted MR images, was significantly greater than PA for both early-phase and delayed-phase CT (p 2 (p 2 (p 2 (p = 0.159) for MRI vs. early-phase CT, MRI vs. delayed-phase CT, and early-phase CT vs. delayed-phase CT, respectively. Different luminal densities by contrast enhancement do not affect the CT measurement of plaque area for the detection of obstructive coronary artery disease

  1. Estimation of adsorption-induced pore pressure and confinement in a nanoscopic slit pore by a density functional theory

    Science.gov (United States)

    Grégoire, David; Malheiro, Carine; Miqueu, Christelle

    2018-03-01

    This study aims at characterising the adsorption-induced pore pressure and confinement in nanoscopic pores by molecular non-local density functional theory (DFT). Considering its important potential industrial applications, the adsorption of methane in graphitic slit pores has been selected as the test case. While retaining the accuracy of molecular simulations at pore scale, DFT has a very low computational cost that allows obtaining highly resolved pore pressure maps as a function of both pore width and thermodynamic conditions. The dependency of pore pressure on these parameters (pore width, pressure and temperature) is carefully analysed in order to highlight the effect of each parameter on the confined fluid properties that impact the solid matrix.

  2. On finite volume method implementation of poro-elasto-plasticity soil model

    DEFF Research Database (Denmark)

    Tang, Tian; Hededal, Ole; Cardiff, Philip

    2015-01-01

    Accurate prediction of the interactions between the nonlinear soil skeleton and the pore fluid under loading plays a vital role in many geotechnical applications. It is therefore important to develop a numerical method that can effectively capture this nonlinear soil-pore fluid coupling effect. T...

  3. Feedbacks Between Soil Structure and Microbial Activities in Soil

    Science.gov (United States)

    Bailey, V. L.; Smith, A. P.; Fansler, S.; Varga, T.; Kemner, K. M.; McCue, L. A.

    2017-12-01

    Soil structure provides the physical framework for soil microbial habitats. The connectivity and size distribution of soil pores controls the microbial access to nutrient resources for growth and metabolism. Thus, a crucial component of soil research is how a soil's three-dimensional structure and organization influences its biological potential on a multitude of spatial and temporal scales. In an effort to understand microbial processes at scale more consistent with a microbial community, we have used soil aggregates as discrete units of soil microbial habitats. Our research has shown that mean pore diameter (x-ray computed tomography) of soil aggregates varies with the aggregate diameter itself. Analyzing both the bacterial composition (16S) and enzyme activities of individual aggregates showed significant differences in the relative abundances of key members the microbial communities associated with high enzyme activities compared to those with low activities, even though we observed no differences in the size of the biomass, nor in the overall richness or diversity of these communities. We hypothesize that resources and substrates have stimulated key populations in the aggregates identified as highly active, and as such, we conducted further research that explored how such key populations (i.e. fungal or bacterial dominated populations) alter pathways of C accumulation in aggregate size domains and microbial C utilization. Fungi support and stabilize soil structure through both physical and chemical effects of their hyphal networks. In contrast, bacterial-dominated communities are purported to facilitate micro- and fine aggregate stabilization. Here we quantify the direct effects fungal versus bacterial dominated communities on aggregate formation (both the rate of aggregation and the quality, quantity and distribution of SOC contained within aggregates). A quantitative understanding of the different mechanisms through which fungi or bacteria shape aggregate

  4. Spatial Variability of Soil Morphorlogical and Physico- Chemical ...

    African Journals Online (AJOL)

    user

    The available moisture of soil was very low thus water holding capacity (WHC) and wilting point (WP) of the soil was ... with spatial distribution of soil properties and its effect on ... Pore size and root .... nutrient and have better stability. Thus.

  5. Lasagna trademark soil remediation

    International Nuclear Information System (INIS)

    1996-04-01

    Lasagna trademark is an integrated, in situ remediation technology being developed which remediates soils and soil pore water contaminated with soluble organic compounds. Lasagna trademark is especially suited to sites with low permeability soils where electroosmosis can move water faster and more uniformly than hydraulic methods, with very low power consumption. The process uses electrokinetics to move contaminants in soil pore water into treatment zones where the contaminants can be captured and decomposed. Initial focus is on trichloroethylene (TCE), a major contaminant at many DOE and industrial sites. Both vertical and horizontal configurations have been conceptualized, but fieldwork to date is more advanced for the vertical configuration. Major features of the technology are electrodes energized by direct current, which causes water and soluble contaminants to move into or through the treatment layers and also heats the soil; treatment zones containing reagents that decompose the soluble organic contaminants or adsorb contaminants for immobilization or subsequent removal and disposal; and a water management system that recycles the water that accumulates at the cathode (high pH) back to the anode (low pH) for acid-base neutralization. Alternatively, electrode polarity can be reversed periodically to reverse electroosmotic flow and neutralize pH

  6. Permeability changes induced by microfissure closure and opening in tectonized materials. Effect on slope pore pressure regime.

    Science.gov (United States)

    De la Fuente, Maria; Vaunat, Jean; Pedone, Giuseppe; Cotecchia, Federica; Sollecito, Francesca; Casini, Francesca

    2015-04-01

    Tectonized clays are complex materials characterized by several levels of structures that may evolve during load and wetting/drying processes. Some microstructural patterns, as microfissures, have a particular influence on the value of permeability which is one of the main factors controlling pore pressure regime in slopes. In this work, the pore pressure regime measured in a real slope of tectonized clay in Southern Italy is analyzed by a numerical model that considers changes in permeability induced by microfissure closure and opening during the wetting and drying processes resulting from climatic actions. Permeability model accounts for the changes in Pore Size Distribution observed by Microscopy Intrusion Porosimetry. MIP tests are performed on representative samples of ground in initial conditions ("in situ" conditions) and final conditions (deformed sample after applying a wetting path that aims to reproduce the saturation of the soil under heavy rains). The resulting measurements allow for the characterization at microstructural level of the soil, identifying the distribution of dominant families pores in the sample and its evolution under external actions. Moreover, comparison of pore size density functions allows defining a microstructural parameter that depends on void ratio and degree of saturation and controls the variation of permeability. Model has been implemented in a thermo-hydro-mechanical code provided with a special boundary condition for climatic actions. Tool is used to analyze pore pressure measurements obtained in the tectonized clay slope. Results are analyzed at the light of the effect that permeability changes during wetting and drying have on the pore pressure regime.

  7. Field Test Design Simulations of Pore-Water Extraction for the SX Tank Farm

    Energy Technology Data Exchange (ETDEWEB)

    Truex, Michael J. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Oostrom, Martinus [Pacific Northwest National Lab. (PNNL), Richland, WA (United States)

    2013-09-01

    A proof of principle test of pore water extraction is being performed by Washington River Protection Solutions for the U.S. Department of Energy, Office of River Protection. This test is being conducted to meet the requirements of Hanford Federal Facility Agreement and Consent Order (HFFACO) (Ecology et al. 1989) Milestone M 045-20, and is described in RPP-PLAN-53808, 200 West Area Tank Farms Interim Measures Investigation Work Plan. To support design of this test, numerical simulations were conducted to help define equipment and operational parameters. The modeling effort builds from information collected in laboratory studies and from field characterization information collected at the test site near the Hanford Site 241-SX Tank Farm. Numerical simulations were used to evaluate pore-water extraction performance as a function of the test site properties and for the type of extraction well configuration that can be constructed using the direct-push installation technique. Output of simulations included rates of water and soil-gas production as a function of operational conditions for use in supporting field equipment design. The simulations also investigated the impact of subsurface heterogeneities in sediment properties and moisture distribution on pore-water extraction performance. Phenomena near the extraction well were also investigated because of their importance for pore-water extraction performance.

  8. Minimum requirements for predictive pore-network modeling of solute transport in micromodels

    Science.gov (United States)

    Mehmani, Yashar; Tchelepi, Hamdi A.

    2017-10-01

    Pore-scale models are now an integral part of analyzing fluid dynamics in porous materials (e.g., rocks, soils, fuel cells). Pore network models (PNM) are particularly attractive due to their computational efficiency. However, quantitative predictions with PNM have not always been successful. We focus on single-phase transport of a passive tracer under advection-dominated regimes and compare PNM with high-fidelity direct numerical simulations (DNS) for a range of micromodel heterogeneities. We identify the minimum requirements for predictive PNM of transport. They are: (a) flow-based network extraction, i.e., discretizing the pore space based on the underlying velocity field, (b) a Lagrangian (particle tracking) simulation framework, and (c) accurate transfer of particles from one pore throat to the next. We develop novel network extraction and particle tracking PNM methods that meet these requirements. Moreover, we show that certain established PNM practices in the literature can result in first-order errors in modeling advection-dominated transport. They include: all Eulerian PNMs, networks extracted based on geometric metrics only, and flux-based nodal transfer probabilities. Preliminary results for a 3D sphere pack are also presented. The simulation inputs for this work are made public to serve as a benchmark for the research community.

  9. Energy conversion device with support member having pore channels

    Science.gov (United States)

    Routkevitch, Dmitri [Longmont, CO; Wind, Rikard A [Johnstown, CO

    2014-01-07

    Energy devices such as energy conversion devices and energy storage devices and methods for the manufacture of such devices. The devices include a support member having an array of pore channels having a small average pore channel diameter and having a pore channel length. Material layers that may include energy conversion materials and conductive materials are coaxially disposed within the pore channels to form material rods having a relatively small cross-section and a relatively long length. By varying the structure of the materials in the pore channels, various energy devices can be fabricated, such as photovoltaic (PV) devices, radiation detectors, capacitors, batteries and the like.

  10. Arbuscular mycorrhizal fungi make a complex contribution to soil aggregation

    Science.gov (United States)

    McGee, Peter; Daynes, Cathal; Damien, Field

    2013-04-01

    Soil aggregates contain solid and fluid components. Aggregates develop as a consequence of the organic materials, plants and hyphae of arbuscular mycorrhizal (AM) fungi acting on the solid phase. Various correlative studies indicate hyphae of AM fungi enmesh soil particles, but their impact on the pore space is poorly understood. Hyphae may penetrate between particles, remove water from interstitial spaces, and otherwise re-arrange the solid phase. Thus we might predict that AM fungi also change the pore architecture of aggregates. Direct observations of pore architecture of soil, such as by computer-aided tomography (CT), is difficult. The refractive natures of solid and biological material are similar. The plant-available water in various treatments allows us to infer changes in pore architecture. Our experimental studies indicate AM fungi have a complex role in the formation and development of aggregates. Soils formed from compost and coarse subsoil materials were planted with mycorrhizal or non-mycorrhizal seedlings and the resultant soils compared after 6 or 14 months in separate experiments. As well as enmeshing particles, AM fungi were associated with the development of a complex pore space and greater pore volume. Even though AM fungi add organic matter to soil, the modification of pore space is not correlated with organic carbon. In a separate study, we visualised hyphae of AM fungi in a coarse material using CT. In this study, hyphae appeared to grow close to the surfaces of particles with limited ramification across the pore spaces. Hyphae of AM fungi appear to utilise soil moisture for their growth and development of mycelium. The strong correlation between moisture and hyphae has profound implications for soil aggregation, plant utilisation of soil water, and the distribution of water as water availability declines.

  11. Radioactive pollution of the Chernobyl cooling pond bottom sediments. I. Water-physical properties, chemical compound and radioactive pollution of pore water

    Directory of Open Access Journals (Sweden)

    L. S. Pirnach

    2011-03-01

    Full Text Available First results of complex research of the Chernobyl cooling pond bottom sediments are presented. The general problematic is considered. Information about vertical distribution of bottom sediments water-physical properties, and also ionic compound and radioactive pollution 137Cs and 90Sr of pore water is received. The inventory of bottom sediments pore water activity is calculated. Strong correlations between concentration in pore water 137Cs, K +, NH4 + within the selected sediments columns are found out. Results of researches are intended for the forecast of radioecological situation change in the cooling pond water-soil complex during drying-up.

  12. Silicon pore optics developments and status

    DEFF Research Database (Denmark)

    Bavdaz, Marcos; Wille, Eric; Wallace, Kotska

    2012-01-01

    Silicon Pore Optics (SPO) is a lightweight high performance X-ray optics technology being developed in Europe, driven by applications in observatory class high energy astrophysics missions. An example of such application is the former ESA science mission candidate ATHENA (Advanced Telescope...... for High Energy Astrophysics), which uses the SPO technology for its two telescopes, in order to provide an effective area exceeding 1 m2 at 1 keV, and 0.5 m2 at 6 keV, featuring an angular resolution of 10" or better [1 to 24]. This paper reports on the development activities led by ESA, and the status...

  13. Soil physical properties affecting soil erosion in tropical soils

    International Nuclear Information System (INIS)

    Lobo Lujan, D.

    2004-01-01

    The total vegetated land area of the earth is about 11,500 hectare. Of this, about 12% is in South America. Of this, about 14% is degraded area. Water erosion, chemical degradation, wind erosion, and physical degradation have been reported as main types of degradation. In South America water erosion is a major process for soil degradation. Nevertheless, water erosion can be a consequence of degradation of the soil structure, especially the functional attributes of soil pores to transmit and retain water, and to facilitate root growth. Climate, soil and topographic characteristics determine runoff and erosion potential from agricultural lands. The main factors causing soil erosion can be divided into three groups: Energy factors: rainfall erosivity, runoff volume, wind strength, relief, slope angle, slope length; Protection factors: population density, plant cover, amenity value (pressure for use) and land management; and resistance factors: soil erodibility, infiltration capacity and soil management. The degree of soil erosion in a particular climatic zone, with particular soils, land use and socioeconomic conditions, will always result from a combination of the above mentioned factors. It is not easy to isolate a single factor. However, the soil physical properties that determine the soil erosion process, because the deterioration of soil physical properties is manifested through interrelated problems of surface sealing, crusting, soil compaction, poor drainage, impeded root growth, excessive runoff and accelerated erosion. When an unprotected soil surface is exposed to the direct impact of raindrops it can produce different responses: Production of smaller aggregates, dispersed particles, particles in suspension and translocation and deposition of particles. When this has occurred, the material is reorganized at the location into a surface seal. Aggregate breakdown under rainfall depends on soil strength and a certain threshold kinetic energy is needed to start

  14. Effect of the animals on the soil

    International Nuclear Information System (INIS)

    Bonilla Correa, Carmen Rosa

    2000-01-01

    Soil is defined here in terms of opposite arbitrary frontiers more than its functions. The animals of the soil are defined in relation to their effect on the soil. The animals that live in the soil and intimately related to they are part of the soil. The animals that live on the soil make him contributions. Many animals are anphi-habitants, that is to say, they live in the soil and a one atmosphere outside of the soil. Animal exopedonics (outside of the soil) and endopedonics (inside the soil) they are considered with regard to twelve activities: blended, accumulation, formation of pores, obstruction of pores, formation and peds destruction, regulation of the erosion of the soil, regulation of the movement of air and the soil, regulation of the liter of plants, regulation of the animal liter, regulation of the cycle of nutritious, regulation of the biota and production of element special. The animals participate in numerous processes of formation of the soil and they affect the use of the same one

  15. Experimental study on microstructure characters of foamed lightweight soil

    Science.gov (United States)

    Qiu, Youqiang; Li, Yongliang; Li, Meixia; Liu, Yaofu; Zhang, Liujun

    2018-01-01

    In order to verify the microstructure of foamed lightweight soil and its characters of compressive strength, four foamed lightweight soil samples with different water-soild ratio were selected and the microstructure characters of these samples were scanned by electron microscope. At the same time, the characters of compressive strength of foamed lightweight soil were analyzed from the microstructure. The study results show that the water-soild ratio has a prominent effect on the microstructure and compressive strength of foamed lightweight soil, with the decrease of water-solid ratio, the amount and the perforation of pores would be reduced significantly, thus eventually forming a denser and fuller interior structure. Besides, the denser microstructure and solider pore-pore wall is benefit to greatly increase mechanical intensity of foamed lightweight soil. In addition, there are very few acicular ettringite crystals in the interior of foamed lightweight soil, its number is also reduced with the decrease in water-soild ratio.

  16. Performance characterization of silicon pore optics

    Science.gov (United States)

    Collon, M. J.; Kraft, S.; Günther, R.; Maddox, E.; Beijersbergen, M.; Bavdaz, M.; Lumb, D.; Wallace, K.; Krumrey, M.; Cibik, L.; Freyberg, M.

    2006-06-01

    The characteristics of the latest generation of assembled silicon pore X-ray optics are discussed in this paper. These very light, stiff and modular high performance pore optics (HPO) have been developed [1] for the next generation of astronomical X-ray telescopes, which require large collecting areas whilst achieving angular resolutions better than 5 arcseconds. The suitability of 12 inch silicon wafers as high quality optical mirrors and the automated assembly process are discussed elsewhere in this conference. HPOs with several tens of ribbed silicon plates are assembled by bending the plates into an accurate cylindrical shape and directly bonding them on top of each other. The achievable figure accuracy is measured during assembly and in test campaigns at X-ray testing facilities like BESSY-II and PANTER. Pencil beam measurements allow gaining information on the quality achieved by the production process with high spatial resolution. In combination with full beam illumination a complete picture of the excellent performance of these optics can be derived. Experimental results are presented and discussed in detail. The results of such campaigns are used to further improve the production process in order to match the challenging XEUS requirements [2] for imaging resolution and mass.

  17. A model based on soil structural aspects describing the fate of genetically modified bacteria in soil

    NARCIS (Netherlands)

    Hoeven, van der N.; Elsas, van J.D.; Heijnen, C.E.

    1996-01-01

    A computer simulation model was developed which describes growth and competition of bacteria in the soil environment. In the model, soil was assumed to contain millions of pores of a few different size classes. An introduced bacterial strain, e.g. a genetically modified micro-organism (GEMMO), was

  18. comparative assessment residual soils in residual soils in parts of e

    African Journals Online (AJOL)

    eobe

    residual soil formed from Zuma rock. The Zuma r is an igneous .... The liquid limit (LL) is the lowest water content above which soil .... where this effect begins to be counteracted by the saturation of the ... retaining walls, tunnel linings and timbering of excavation. .... event of pore pressure build up due to excessive moisture.

  19. Year-round estimation of soil moisture content using temporally variable soil hydraulic parameters

    Czech Academy of Sciences Publication Activity Database

    Šípek, Václav; Tesař, Miroslav

    2017-01-01

    Roč. 31, č. 6 (2017), s. 1438-1452 ISSN 0885-6087 R&D Projects: GA ČR GA16-05665S Institutional support: RVO:67985874 Keywords : hydrological modelling * pore-size distribution * saturated hydraulic conductivity * seasonal variability * soil hydraulic parameters * soil moisture Subject RIV: DA - Hydrology ; Limnology OBOR OECD: Hydrology Impact factor: 3.014, year: 2016

  20. [A photographic scale for evaluating facial pores and analysis of factors associated with pore widening in Chengdu].

    Science.gov (United States)

    Wang, Qing; Zhou, Cheng-xia; Meng, Hui-min; Wang, Xi; Li, Li

    2010-09-01

    To develop a photographic scale for grading widening of pores, and to identify the factors associated with pore widening. People with widened pores were recruited, with photographs taken on their nasal tips, nasal alas and cheeks. A questionnaire survey was undertaken by dermatologists to assess the severity of pore widening. A Cumulative Logit Model was established to identify factors that were associated with pore widening. A total of 115 people participated in the study and 562 photographs were taken. The photographic scale was highly consistent with the clinical judgment. Another 1011 residents aged from 18 to 70 years old in Chengdu were surveyed. The logit model revealed that facial pore widening were associated with gender, age, oily skin, sun protection and anti-aging cosmetic. The photographic scale is reliable and easy to use. Gender, age and oily skin are risk factors, and sun protection and anti-aging cosmetic are protective factors with related to pore widening.

  1. Biot Critical Frequency Applied as Common Friction Factor for Chalk with Different Pore Fluids and Temperatures

    DEFF Research Database (Denmark)

    Andreassen, Katrine Alling; Fabricius, Ida Lykke

    2010-01-01

    Injection of water into chalk hydrocarbon reservoirs has lead to mechanical yield and failure. Laboratory experiments on chalk samples correspondingly show that the mechanical properties of porous chalk depend on pore fluid and temperature. Water has a significant softening effect on elastic...... and we propose that the fluid effect on mechanical properties of highly porous chalk may be the result of liquid‐solid friction. Applying a different strain or stress rate is influencing the rock strength and needs to be included. The resulting function is shown to relate to the material dependent...... and rate independent b-factor used when describing the time dependent mechanical properties of soft rock or soils. As a consequence it is then possible to further characterize the material constant from the porosity and permeability of the rock as well as from pore fluid density and viscosity which...

  2. Soil compaction: Evaluation of stress transmission and resulting soil structure

    Science.gov (United States)

    Naveed, Muhammad; Schjønning, Per; Keller, Thomas; Lamande, Mathieu

    2016-04-01

    Accurate estimation of stress transmission and resultant deformation in soil profiles is a prerequisite for the development of predictive models and decision support tools for preventing soil compaction. Numerous studies have been carried out on the effects of soil compaction, whilst relatively few studies have focused on the cause (mode of stress transmission in the soil). We have coupled both cause and effects together in the present study by carrying out partially confined compression tests on (1) wet aggregates, (2) air dry aggregates, and (3) intact soils to quantify stress transmission and compaction-resulted soil structure at the same time. Stress transmission was quantified using both X-ray CT and Tactilus sensor mat, and soil-pore structure was quantified using X-ray CT. Our results imply that stress transmission through soil highly depends on the magnitude of applied load and aggregate strength. As soon as the applied load is lower than the aggregate strength, the mode of stress transmission is discrete as stresses were mainly transmitted through chain of aggregates. With increasing applied load soil aggregates start deforming that transformed heterogeneous soil into homogenous, as a result stress transmission mode was shifted from discrete towards more like a continuum. Continuum-like stress transmission mode was better simulated with Boussinesq (1885) model based on theory of elasticity compared to discrete. The soil-pore structure was greatly affected by increasing applied stresses. Total porosity was reduced 5-16% and macroporosity 50-85% at 620 kPa applied stress for the intact soils. Similarly, significant changes in the morphological indices of the macropore space were also observed with increasing applied stresses.

  3. Physico-Chemical Properties of Three Salt-Affected Soils in the ...

    African Journals Online (AJOL)

    komla

    but the B-horizon is between low to high. ... Excess sodium on the soil exchange complex and/or soluble salts in the soil profile has rendered an estimated ...... dispersion causes soil pore blockage resulting in the reduction of soil permeability.

  4. Multiple Approaches to Characterizing Pore Structure in Natural Rock

    Science.gov (United States)

    Hu, Q.; Dultz, S.; Hamamoto, S.; Ewing, R. P.

    2012-12-01

    Microscopic characteristics of porous media - pore shape, pore-size distribution, and pore connectivity - control fluid flow and chemical transport, and are important in hydrogeological studies of rock formations in the context of energy, environmental, and water resources management. This presentation discusses various approaches to investigating pore structure of rock, with a particular focus on the Barnett Shale in north Texas used for natural gas production. Approaches include imbibition, tracer diffusion, porosimetry (MIP, vapor adsorption/desorption isotherms, NMR cyroporometry), and imaging (μ-tomography, Wood's metal impregnation, FIB/SEM). Results show that the Barnett Shale pores are predominantly in the nm size range, with a measured median pore-throat diameter of 6.5 nm. But small pore size is not the major contributor to low gas recovery; rather, the low gas diffusivity appears to be caused by low pore connectivity. Chemical diffusion in sparsely-connected pore spaces is not well described by classical Fickian behavior; anomalous behavior is suggested by percolation theory, and confirmed by results of imbibition tests. Our evolving complementary approaches, with their several advantages and disadvantages, provide a rich toolbox for tackling the pore structure characteristics in the Barnett Shale and other natural rocks.

  5. The effect of soil on cork quality.

    Science.gov (United States)

    Pestana, Miguel N; Gomes, Alberto A

    2014-01-01

    The present work aimed to contribute for a better knowledge regarding soil features as cork quality indicators for stoppers. Cork sampling was made in eight Cork oak stands (montados de sobreiro) located in the Plio-Plistocene sedimentary formations of Península de Setúbal in southern Tagus River region. The samples used to classify the cork as stopper for wine bottles were obtained in eight cork oak stands, covering soils of different types of sandstones of the Plio-plistocene. In each stand, we randomly chose five circular plots with 30 m radius and five trees per plot with same stripping conditions determined by: dendrometric features (HD- height stipping, PBH- perimeter at breaster height), trees vegetative condition (defoliation degree); stand features (density, percentage canopy cover); site conditions (soil type and orientation). In the center of each plot a pit was open to characterize the soil profile and to classify the soil. Cork quality for stoppers was evaluated according to porosity, pores/per cm(2) and cork boards thickness. The soil was characterized according to morphological soil profile features (lithology, soil profound, and soil horizons) and chemical soil surface horizon features (organic matter, pH, macro, and micronutrients availability). Based on the variables studied and using the numerical taxonomy, we settled relationships between the cork quality and some soil features. The results indicate: (1) high correlation between the cork caliber and boron, cation exchange capacity, total nitrogen, exchange acidity, and exchangeable magnesium, potassium, calcium, and sodium in soils of theirs cork oaks; (2) the cork porosity is correlated with the number of pores/cm(2) and magnesium soil content; (3) the other soil features have a lower correlation with the caliber, porosity, and the number of pores per cm(2).

  6. Pore size matters for potassium channel conductance

    Science.gov (United States)

    Moldenhauer, Hans; Pincuntureo, Matías

    2016-01-01

    Ion channels are membrane proteins that mediate efficient ion transport across the hydrophobic core of cell membranes, an unlikely process in their absence. K+ channels discriminate K+ over cations with similar radii with extraordinary selectivity and display a wide diversity of ion transport rates, covering differences of two orders of magnitude in unitary conductance. The pore domains of large- and small-conductance K+ channels share a general architectural design comprising a conserved narrow selectivity filter, which forms intimate interactions with permeant ions, flanked by two wider vestibules toward the internal and external openings. In large-conductance K+ channels, the inner vestibule is wide, whereas in small-conductance channels it is narrow. Here we raise the idea that the physical dimensions of the hydrophobic internal vestibule limit ion transport in K+ channels, accounting for their diversity in unitary conductance. PMID:27619418

  7. Pore structure in blended cement pastes

    DEFF Research Database (Denmark)

    Canut, Mariana Moreira Cavalcanti

    Supplementary cementitious materials (SCMs), such as slag and fly ash, are increasingly used as a substitute for Portland cement in the interests of improvement of engineering properties and sustainability of concrete. According to studies improvement of engineering properties can be explained by...... on assumptions of degree of reaction and product densities gave for plain cement pastes results comparable to MIP data.......Supplementary cementitious materials (SCMs), such as slag and fly ash, are increasingly used as a substitute for Portland cement in the interests of improvement of engineering properties and sustainability of concrete. According to studies improvement of engineering properties can be explained...... supplement each other. Cement pastes (w/b=0.4) with and without slag and fly ash cured at two moisture (sealed and saturated) and temperature (20 and 55ºC) conditions were used to investigate the combined impact of SCMs addition and curing on the pore structure of pastes cured up to two years. Also...

  8. Phase transitions of fluids in heterogeneous pores

    Directory of Open Access Journals (Sweden)

    A. Malijevský

    2016-03-01

    Full Text Available We study phase behaviour of a model fluid confined between two unlike parallel walls in the presence of long range (dispersion forces. Predictions obtained from macroscopic (geometric and mesoscopic arguments are compared with numerical solutions of a non-local density functional theory. Two capillary models are considered. For a capillary comprising two (differently adsorbing walls we show that simple geometric arguments lead to the generalized Kelvin equation locating very accurately capillary condensation, provided both walls are only partially wet. If at least one of the walls is in complete wetting regime, the Kelvin equation should be modified by capturing the effect of thick wetting films by including Derjaguin's correction. Within the second model, we consider a capillary formed of two competing walls, so that one tends to be wet and the other dry. In this case, an interface localized-delocalized transition occurs at bulk two-phase coexistence and a temperature T*(L depending on the pore width L. A mean-field analysis shows that for walls exhibiting first-order wetting transition at a temperature T_{w}, T_{s} > T*(L > T_{w}, where the spinodal temperature Ts can be associated with the prewetting critical temperature, which also determines a critical pore width below which the interface localized-delocalized transition does not occur. If the walls exhibit critical wetting, the transition is shifted below Tw and for a model with the binding potential W(l=A(Tl-2+B(Tl-3+..., where l is the location of the liquid-gas interface, the transition can be characterized by a dimensionless parameter κ=B/(AL, so that the fluid configuration with delocalized interface is stable in the interval between κ=-2/3 and κ ~ -0.23.

  9. Characteristics of Pore Structure and Fractal Dimension of Isometamorphic Anthracite

    Directory of Open Access Journals (Sweden)

    Di Gao

    2017-11-01

    Full Text Available The geologic conditions of No. 3 coal seams are similar to Sihe and Zhaozhuang Collieries, however, the gas production is significantly different. To better understand the effect of pores, by means of experimental measurements and quantitative analysis, the pore properties of high-rank isometamorphic anthracite were thoroughly studied. Our study showed that the pore structures were predominantly adsorptive, accounting for more than 88% of the specific surface area. The coal pores showed typical three-stage fractal characteristics at boundary points of 1 nm and 9 nm (7 nm of coal samples from Zhaozhuang Colliery, and the fractal dimension with 1–9 nm (or 1–7 nm, as being significantly larger than those measured outside the given ranges. Pores in samples from Sihe Colliery were mainly open spherical or ellipsoidal pores in shape; conversely, those from Zhaozhuang Colliery were mainly Y-shaped, V-shaped, or ‘ink-bottle’ type.

  10. Preparation of micro-pored silicone elastomer through radiation crosslinking

    International Nuclear Information System (INIS)

    Gao Xiaoling; Gu Mei; Xie Xubing; Huang Wei

    2013-01-01

    The radiation crosslinking was adopted to prepare the micro-pored silicone elastomer, which was performed by vulcanization and foaming respectively. Radiation crosslinking is a new method to prepare micro-pored material with high performance by use of radiation technology. Silicon dioxide was used as filler, and silicone elastomer was vulcanized by electron beams, then the micro-pored material was made by heating method at a high temperature. The effects of absorbed dose and filler content on the performance and morphology were investigated. The structure and distribution of pores were observed by SEM. The results show that the micro-pored silicon elastomer can be prepared successfully by controlling the absorbed dose and filler content. It has a smooth surface similar to a rubber meanwhile the pores are round and unconnected to each other with the minimum size of 14 μm. And the good mechanical performance can be suitable for further uses. (authors)

  11. Coarse and fine root plants affect pore size distributions differently

    OpenAIRE

    Bodner, G.; Leitner, D.; Kaul, H.-P.

    2014-01-01

    Aims Small scale root-pore interactions require validation of their impact on effective hydraulic processes at the field scale. Our objective was to develop an interpretative framework linking root effects on macroscopic pore parameters with knowledge at the rhizosphere scale. Methods A field experiment with twelve species from different families was conducted. Parameters of Kosugi?s pore size distribution (PSD) model were determined inversely from tension infiltrometer data. Measured root tr...

  12. [CT measurement and clinical application of double-row suture anchor reconstruction for the treatment of Tossy type III acromioclavicular joint dislocation].

    Science.gov (United States)

    Zhang, Chuan-Kai; Liu, Chen; Han, Bing; Feng, Hui; Chen, Qi-Zhong; Sunx, Sun Yi-Yan

    2017-04-25

    To study feasibility and reliability of reconstruction of the acromioclavicular ligament with double-row suture anchor for the treatment of acromioclavicular joint dislocation through coracoid coronal CT measurement, and to provide a new operation method for treating acromioclavicular joint dislocation. Total 60 healthy people received CT examination of shoulder joint, including 30 males and 30 females, ranging in age from 18 to 50 years old. The coronal width, thickness and 20 degree camber angle in the medial part of the toot of coronal were measured using CT scan. The results were applied to clinical treatment for 12 patients with acromioclavicular joint dislocation of Tossy III type. The width in the medial part of the root of the coracoid was(17.65±1.82) mm(left side) and (17.67±1.80) mm(right side) in males; (16.55±1.78) mm(left side) and (16.52±1.74) mm (right side) in females. The vertical thickness of the roots of the coracoid: (13.11±2.11) mm(left side) and (13.16±2.09) mm(right side) in males;(12.79±2.21) mm(left side) and (12.76±2.19) mm (right side) in females. The thickness of 20 degrees camber angle of the coracoid roots: (16.32±1.74) mm (left side) and (16.30±1.69) mm(right side) in males; (15.68±1.44) mm(left side) and (15.67±1.43) mm(right side) in females. Total 12 patients were treated with anchor nail with extraversion 20 degrees. The postoperative X-ray films showed bone anchors were located in the coracoid process, no bone splitting. Double-row suture anchor of 5 mm diameter nails can be placed into coracoid with extraversion 20 degrees, which is safety.

  13. The effect of scaffold pore size in cartilage tissue engineering.

    Science.gov (United States)

    Nava, Michele M; Draghi, Lorenza; Giordano, Carmen; Pietrabissa, Riccardo

    2016-07-26

    The effect of scaffold pore size and interconnectivity is undoubtedly a crucial factor for most tissue engineering applications. The aim of this study was to examine the effect of pore size and porosity on cartilage construct development in different scaffolds seeded with articular chondrocytes. We fabricated poly-L-lactide-co-trimethylene carbonate scaffolds with different pore sizes, using a solvent-casting/particulate-leaching technique. We seeded primary bovine articular chondrocytes on these scaffolds, cultured the constructs for 2 weeks and examined cell proliferation, viability and cell-specific production of cartilaginous extracellular matrix proteins, including GAG and collagen. Cell density significantly increased up to 50% with scaffold pore size and porosity, likely facilitated by cell spreading on the internal surface of bigger pores, and by increased mass transport of gases and nutrients to cells, and catabolite removal from cells, allowed by lower diffusion barriers in scaffolds with a higher porosity. However, both the cell metabolic activity and the synthesis of cartilaginous matrix proteins significantly decreased by up to 40% with pore size. We propose that the association of smaller pore diameters, causing 3-dimensional cell aggregation, to a lower oxygenation caused by a lower porosity, could have been the condition that increased the cell-specific synthesis of cartilaginous matrix proteins in the scaffold with the smallest pores and the lowest porosity among those tested. In the initial steps of in vitro cartilage engineering, the combination of small scaffold pores and low porosity is an effective strategy with regard to the promotion of chondrogenesis.

  14. Real-Time Pore Pressure Detection: Indicators and Improved Methods

    Directory of Open Access Journals (Sweden)

    Jincai Zhang

    2017-01-01

    Full Text Available High uncertainties may exist in the predrill pore pressure prediction in new prospects and deepwater subsalt wells; therefore, real-time pore pressure detection is highly needed to reduce drilling risks. The methods for pore pressure detection (the resistivity, sonic, and corrected d-exponent methods are improved using the depth-dependent normal compaction equations to adapt to the requirements of the real-time monitoring. A new method is proposed to calculate pore pressure from the connection gas or elevated background gas, which can be used for real-time pore pressure detection. The pore pressure detection using the logging-while-drilling, measurement-while-drilling, and mud logging data is also implemented and evaluated. Abnormal pore pressure indicators from the well logs, mud logs, and wellbore instability events are identified and analyzed to interpret abnormal pore pressures for guiding real-time drilling decisions. The principles for identifying abnormal pressure indicators are proposed to improve real-time pore pressure monitoring.

  15. Fusion Pore Diameter Regulation by Cations Modulating Local Membrane Anisotropy

    Directory of Open Access Journals (Sweden)

    Doron Kabaso

    2012-01-01

    Full Text Available The fusion pore is an aqueous channel that is formed upon the fusion of the vesicle membrane with the plasma membrane. Once the pore is open, it may close again (transient fusion or widen completely (full fusion to permit vesicle cargo discharge. While repetitive transient fusion pore openings of the vesicle with the plasma membrane have been observed in the absence of stimulation, their frequency can be further increased using a cAMP-increasing agent that drives the opening of nonspecific cation channels. Our model hypothesis is that the openings and closings of the fusion pore are driven by changes in the local concentration of cations in the connected vesicle. The proposed mechanism of fusion pore dynamics is considered as follows: when the fusion pore is closed or is extremely narrow, the accumulation of cations in the vesicle (increased cation concentration likely leads to lipid demixing at the fusion pore. This process may affect local membrane anisotropy, which reduces the spontaneous curvature and thus leads to the opening of the fusion pore. Based on the theory of membrane elasticity, we used a continuum model to explain the rhythmic opening and closing of the fusion pore.

  16. X-ray microtomography application in pore space reservoir rock.

    Science.gov (United States)

    Oliveira, M F S; Lima, I; Borghi, L; Lopes, R T

    2012-07-01

    Characterization of porosity in carbonate rocks is important in the oil and gas industry since a major hydrocarbons field is formed by this lithology and they have a complex media porous. In this context, this research presents a study of the pore space in limestones rocks by x-ray microtomography. Total porosity, type of porosity and pore size distribution were evaluated from 3D high resolution images. Results show that carbonate rocks has a complex pore space system with different pores types at the same facies. Copyright © 2011 Elsevier Ltd. All rights reserved.

  17. Role of the synaptobrevin C terminus in fusion pore formation

    DEFF Research Database (Denmark)

    Ngatchou, Annita N; Kisler, Kassandra; Fang, Qinghua

    2010-01-01

    Neurotransmitter release is mediated by the SNARE proteins synaptobrevin II (sybII, also known as VAMP2), syntaxin, and SNAP-25, generating a force transfer to the membranes and inducing fusion pore formation. However, the molecular mechanism by which this force leads to opening of a fusion pore...... stimulation, the SNARE complex pulls the C terminus of sybII deeper into the vesicle membrane. We propose that this movement disrupts the vesicular membrane continuity leading to fusion pore formation. In contrast to current models, the experiments suggest that fusion pore formation begins with molecular...

  18. Simulation of pore pressure accumulation under cyclic loading using Finite Volume Method

    DEFF Research Database (Denmark)

    Tang, Tian; Hededal, Ole

    2014-01-01

    This paper presents a finite volume implementation of a porous, nonlinear soil model capable of simulating pore pressure accumulation under cyclic loading. The mathematical formulations are based on modified Biot’s coupled theory by substituting the original elastic constitutive model...... with an advanced elastoplastic model suitable for describing monotonic as well as cyclic loading conditions. The finite volume method is applied to discretize these formulations. The resulting set of coupled nonlinear algebraic equations are then solved by a ’segregated’ solution procedure. An efficient return...

  19. Bioaccessible Porosity in Soil Aggregates and Implications for Biodegradation of High Molecular Weight Petroleum Compounds.

    Science.gov (United States)

    Akbari, Ali; Ghoshal, Subhasis

    2015-12-15

    We evaluated the role of soil aggregate pore size on biodegradation of essentially insoluble petroleum hydrocarbons that are biodegraded primarily at the oil-water interface. The size and spatial distribution of pores in aggregates sampled from biodegradation experiments of a clayey, aggregated, hydrocarbon-contaminated soil with relatively high bioremediation end point were characterized by image analyses of X-ray micro-CT scans and N2 adsorption. To determine the bioaccessible pore sizes, we performed separate experiments to assess the ability of hydrocarbon degrading bacteria isolated from the soil to pass through membranes with specific sized pores and to access hexadecane (model insoluble hydrocarbon). Hexadecane biodegradation occurred only when pores were 5 μm or larger, and did not occur when pores were 3 μm and smaller. In clayey aggregates, ∼ 25% of the aggregate volume was attributed to pores larger than 4 μm, which was comparable to that in aggregates from a sandy, hydrocarbon-contaminated soil (~23%) scanned for comparison. The ratio of volumes of inaccessible pores (4 μm) in the clayey aggregates was 0.32, whereas in the sandy aggregates it was approximately 10 times lower. The role of soil microstructure on attainable bioremediation end points could be qualitatively assessed in various soils by the aggregate characterization approach outlined herein.

  20. Pore-size Distributions from Nitrogen Adsorption Revisited: Models Comparison with Controlled-pore Glasses

    Czech Academy of Sciences Publication Activity Database

    Šolcová, Olga; Matějová, Lenka; Schneider, Petr

    2006-01-01

    Roč. 313, č. 2 (2006), s. 167-176 ISSN 0926-860X R&D Projects: GA ČR(CZ) GA104/04/2116; GA ČR GD203/03/H140; GA AV ČR IAA4072404 Institutional research plan: CEZ:AV0Z40720504 Keywords : pore size distribution * physical adsorption * standard nitrogen isotherm Subject RIV: CF - Physical ; Theoretical Chemistry Impact factor: 2.630, year: 2006

  1. The effect of soil on cork quality

    Directory of Open Access Journals (Sweden)

    Miguel Nugent Pestana

    2014-10-01

    Full Text Available The present work aimed to contribute for a better knowledge regarding soil features as cork quality indicators for stoppers.Cork sampling was made in eight Cork oak stands (montados de sobreiro located in different Plio-Plistocene sedimentary formations of Península de Setúbal and Carbonic shistes from paleozoic periods in Saw Grândola, both in southern Tagus River regionThe samples used to classify the cork as stopper for wine bottles were obtained in eight cork oak stands located in Península de Setúbal, south of the River Tagus, covering soils of different types of sandstones of the Plio-plistoceneIn each stand, we randomly chose five circular plots with 30 m radius. Five trees with same stripping conditions determined by the dendrometric features: HD (height stipping, PBH (perimeter at breaster height, and percentage canopy cover, trees vegetative condition (defoliation degree stand features (density, and site conditions (soil type and orientation. In the center of each plot a pit was open to characterize the soil profile and to classify the soil of each plot sampling.Cork quality for stoppers was evaluated according to porosity, pores/per cm 2 and thickness. The soil was characterized according to morphological soil profile features (lithology, soil profound and soil horizons and chemical soil surface horizon features (organic matter, pH, macro and micronutrients availability.Based on the variables studied and using the numerical taxonomy, we settled relationships between the cork quality and some soil features. The results indicate: (1 high correlation between the cork caliber and boron, caption exchange capacity, total nitrogen, exchange acidity and exchangeable magnesium, potassium, calcium and sodium in soils of theirs cork oaks; (2 the cork porosity is correlated with the number of pores/cm2 and magnesium; (3 the other soil features have a lower correlation with the caliber, porosity and the number of pores per cm2.

  2. The effect of soil on cork quality

    Science.gov (United States)

    Pestana, Miguel; Gomes, Alberto

    2014-10-01

    The present work aimed to contribute for a better knowledge regarding soil features as cork quality indicators for stoppers. Cork sampling was made in eight Cork oak stands (montados de sobreiro) located in different Plio-Plistocene sedimentary formations of Península de Setúbal and Carbonic shistes from paleozoic periods in Saw Grândola, both in southern Tagus River region The samples used to classify the cork as stopper for wine bottles were obtained in eight cork oak stands located in “Península de Setúbal”, south of the River Tagus, covering soils of different types of sandstones of the Plio-plistocene In each stand, we randomly chose five circular plots with 30 m radius. Five trees with same stripping conditions determined by the dendrometric features: HD (height stipping, PBH (perimeter at breaster height), and percentage canopy cover, trees vegetative condition (defoliation degree) stand features (density), and site conditions (soil type and orientation). In the center of each plot a pit was open to characterize the soil profile and to classify the soil of each plot sampling. Cork quality for stoppers was evaluated according to porosity, pores/per cm 2 and thickness. The soil was characterized according to morphological soil profile features (lithology, soil profound and soil horizons) and chemical soil surface horizon features (organic matter, pH, macro and micronutrients availability). Based on the variables studied and using the numerical taxonomy, we settled relationships between the cork quality and some soil features. The results indicate: (1) high correlation between the cork caliber and boron, caption exchange capacity, total nitrogen, exchange acidity and exchangeable magnesium, potassium, calcium and sodium in soils of theirs cork oaks; (2) the cork porosity is correlated with the number of pores/cm2 and magnesium; (3) the other soil features have a lower correlation with the caliber, porosity and the number of pores per cm2.

  3. Relating soil solution Zn concentration to diffusive gradients in thin films measurements in contaminated soils.

    Science.gov (United States)

    Degryse, Fien; Smolders, Erik; Oliver, Ian; Zhang, Hao

    2003-09-01

    The technique of diffusive gradients in thin films (DGT) has been suggested to sample an available fraction of metals in soil. The objectives of this study were to compare DGT measurements with commonly measured fractions of Zn in soil, viz, the soil solution concentration and the total Zn concentration. The DGT technique was used to measure fluxes and interfacial concentrations of Zn in three series of field-contaminated soils collected in transects toward galvanized electricity pylons and in 15 soils amended with ZnCl2 at six rates. The ratio of DGT-measured concentration to pore water concentration of Zn, R, varied between 0.02 and 1.52 (mean 0.29). This ratio decreased with decreasing distribution coefficient, Kd, of Zn in the soil, which is in agreement with the predictions of the DGT-induced fluxes in soils (DIFS) model. The R values predicted with the DIFS model were generally larger than the observed values in the ZnCl2-amended soils at the higher Zn rates. A modification of the DIFS model indicated that saturation of the resin gel was approached in these soils, despite the short deployment times used (2 h). The saturation of the resin with Zn did not occur in the control soils (no Zn salt added) or the field-contaminated soils. Pore water concentration of Zn in these soils was predicted from the DGT-measured concentration and the total Zn content. Predicted values and observations were generally in good agreement. The pore water concentration was more than 5 times underpredicted for the most acid soil (pH = 3) and for six other soils, for which the underprediction was attributed to the presence of colloidal Zn in the soil solution.

  4. Beyond the rhizosphere: growth and function of arbuscular mycorrhizal external hyphae in sands of varying pore sizes

    DEFF Research Database (Denmark)

    Drew, E.A.; Murray, R.S.; Smith, S.E.

    2003-01-01

    Research on nutrient acquisition by symbiotic arbuscular mycorrhizal (AM) fungi has mainly focused on the root fungus interface and less attention has been given to the growth and functioning of external hyphae in the bulk soil. The growth and function of external hyphae may be affected....... intraradices obtained a greater proportion of P at a distance from the host roots. Differences in P acquisition were not correlated with production of external hyphae in the four media zones and changes in sand pore size did not affect the ability of the fungi studied to acquire P at a distance from the host...... roots. Production of external hyphae in HC2 was influenced by fungal species and media treatment. Both fungi produced maximum amounts of external hyphae in the soil medium. Sand pore size affected growth of G. intraradices (but not G. mosseae) and hyphal diameter distributions of both fungi. The results...

  5. Propagation of a plasma streamer in catalyst pores

    Science.gov (United States)

    Zhang, Quan-Zhi; Bogaerts, Annemie

    2018-03-01

    Although plasma catalysis is gaining increasing interest for various environmental applications, the underlying mechanisms are still far from understood. For instance, it is not yet clear whether and how plasma streamers can propagate in catalyst pores, and what is the minimum pore size to make this happen. As this is crucial information to ensure good plasma-catalyst interaction, we study here the mechanism of plasma streamer propagation in a catalyst pore, by means of a two-dimensional particle-in-cell/Monte Carlo collision model, for various pore diameters in the nm-range to μm-range. The so-called Debye length is an important criterion for plasma penetration into catalyst pores, i.e. a plasma streamer can penetrate into pores when their diameter is larger than the Debye length. The Debye length is typically in the order of a few 100 nm up to 1 μm at the conditions under study, depending on electron density and temperature in the plasma streamer. For pores in the range of ∼50 nm, plasma can thus only penetrate to some extent and at very short times, i.e. at the beginning of a micro-discharge, before the actual plasma streamer reaches the catalyst surface and a sheath is formed in front of the surface. We can make plasma streamers penetrate into smaller pores (down to ca. 500 nm at the conditions under study) by increasing the applied voltage, which yields a higher plasma density, and thus reduces the Debye length. Our simulations also reveal that the plasma streamers induce surface charging of the catalyst pore sidewalls, causing discharge enhancement inside the pore, depending on pore diameter and depth.

  6. Accounting for microbial habitats in modeling soil organic matter dynamics

    Science.gov (United States)

    Chenu, Claire; Garnier, Patricia; Nunan, Naoise; Pot, Valérie; Raynaud, Xavier; Vieublé, Laure; Otten, Wilfred; Falconer, Ruth; Monga, Olivier

    2017-04-01

    The extreme heterogeneity of soils constituents, architecture and inhabitants at the microscopic scale is increasingly recognized. Microbial communities exist and are active in a complex 3-D physical framework of mineral and organic particles defining pores of various sizes, more or less inter-connected. This results in a frequent spatial disconnection between soil carbon, energy sources and the decomposer organisms and a variety of microhabitats that are more or less suitable for microbial growth and activity. However, current biogeochemical models account for C dynamics at the macroscale (cm, m) and consider time- and spatially averaged relationships between microbial activity and soil characteristics. Different modelling approaches have intended to account for this microscale heterogeneity, based either on considering aggregates as surrogates for microbial habitats, or pores. Innovative modelling approaches are based on an explicit representation of soil structure at the fine scale, i.e. at µm to mm scales: pore architecture and their saturation with water, localization of organic resources and of microorganisms. Three recent models are presented here, that describe the heterotrophic activity of either bacteria or fungi and are based upon different strategies to represent the complex soil pore system (Mosaic, LBios and µFun). These models allow to hierarchize factors of microbial activity in soil's heterogeneous architecture. Present limits of these approaches and challenges are presented, regarding the extensive information required on soils at the microscale and to up-scale microbial functioning from the pore to the core scale.

  7. Revamping of entisol soil physical characteristics with compost treatment

    Science.gov (United States)

    Sumono; Loka, S. P.; Nasution, D. L. S.

    2018-02-01

    Physical characteristic of Entisol soil is an important factor for the growth of plant. The aim of this research was to know the effect of compost application on physical characteristics of Entisol soil. The research method used was experimental method with 6 (six) treatments and 3 replications of which K1 = 10 kg Entisol soil without compost, K2 = 9 Kg Entisol soil with 1 kg compost, K3 = 8 kg Entisol soil with 2 kg compost, K4 = 7 kg Entisol soilwith3 kg compost, K5 = 6 kg Entisol soil with 4 kg compost and K6 = 5 kg Entisol soil with 5 kg compost. The observed parameters were soil texture, soil organic matter, soil thickness, porosity, soil pore size, soil permeability and water availability. The results showed that the Entisol soil texture was loamy sand texture, the value of soil organic matter ranged from 0.74% to 4.69%, soil thickness ranged from 13.83 to 20.16 cm, porosity ranged from16% to 37%, soil pore size ranged from 2.859 to 5.493 µm, permeability ranged from 1.24 to 5.64 cm/hour and water availability ranged from 6.67% to 9.12% by each treatment.

  8. Pore water pressures and slope stability: a joint geophysical and geotechnical analysis

    International Nuclear Information System (INIS)

    Perrone, Angela; Lapenna, Vincenzo; Vassallo, Roberto; Maio, Caterina Di

    2008-01-01

    Slope stability is influenced by many factors, among which are subsoil structure and pore water pressure distribution. This paper presents a multi-disciplinary approach for the determination of these two factors and for the construction of a reliable model of the subsoil for the slope stability analysis. The case of a clay slope located in the Southern Apennines (Italy) is presented and discussed. Geophysical imaging (2D electrical resistivity tomography—ERT), in situ geotechnical monitoring (measurements of pore pressures and horizontal displacements) and laboratory geotechnical tests (for the determination of index, hydraulic and mechanical properties of soils) have been carried out. The comparison and the integration between ERT images and direct observations of the material extracted from boreholes have allowed us to reconstruct the subsoil stratigraphy with continuity. Thus, a reliable 2D model of the subsoil has been obtained, with well-defined boundaries on which it has been possible to apply appropriate hydraulic conditions. This geotechnical model has been used for studying the pore water pressure distribution and for analysing how the hydraulic boundary conditions—among which rain events—influence the slope stability. Our findings demonstrate the powerful skill of the ERT, if integrated with borehole data, to generate an accurate subsoil model. It is also evident that geophysical imaging can be a source of ambiguity and misjudgement if interpreted without a comparison with geotechnical data

  9. High-resolution synchrotron imaging shows that root hairs influence rhizosphere soil structure formation.

    Science.gov (United States)

    Koebernick, Nicolai; Daly, Keith R; Keyes, Samuel D; George, Timothy S; Brown, Lawrie K; Raffan, Annette; Cooper, Laura J; Naveed, Muhammad; Bengough, Anthony G; Sinclair, Ian; Hallett, Paul D; Roose, Tiina

    2017-10-01

    In this paper, we provide direct evidence of the importance of root hairs on pore structure development at the root-soil interface during the early stage of crop establishment. This was achieved by use of high-resolution (c. 5 μm) synchrotron radiation computed tomography (SRCT) to visualise both the structure of root hairs and the soil pore structure in plant-soil microcosms. Two contrasting genotypes of barley (Hordeum vulgare), with and without root hairs, were grown for 8 d in microcosms packed with sandy loam soil at 1.2 g cm -3 dry bulk density. Root hairs were visualised within air-filled pore spaces, but not in the fine-textured soil regions. We found that the genotype with root hairs significantly altered the porosity and connectivity of the detectable pore space (> 5 μm) in the rhizosphere, as compared with the no-hair mutants. Both genotypes showed decreasing pore space between 0.8 and 0.1 mm from the root surface. Interestingly the root-hair-bearing genotype had a significantly greater soil pore volume-fraction at the root-soil interface. Effects of pore structure on diffusion and permeability were estimated to be functionally insignificant under saturated conditions when simulated using image-based modelling. © 2017 The Authors. New Phytologist © 2017 New Phytologist Trust.

  10. Performance of multilayer coated silicon pore optics

    Science.gov (United States)

    Ackermann, M. D.; Collon, M. J.; Jensen, C. P.; Christensen, F. E.; Krumrey, M.; Cibik, L.; Marggraf, S.; Bavdaz, M.; Lumb, D.; Shortt, B.

    2010-07-01

    The requirements for the IXO (International X-ray Observatory) telescope are very challenging in respect of angular resolution and effective area. Within a clear aperture with 1.7 m > R > 0.25 m that is dictated by the spacecraft envelope, the optics technology must be developed to satisfy simultaneously requirements for effective area of 2.5 m2 at 1.25 keV, 0.65 m2 at 6 keV and 150 cm2 at 30 keV. The reflectivity of the bare mirror substrate materials does not allow these requirements to be met. As such the IXO baseline design contains a coating layout that varies as a function of mirror radius and in accordance with the variation in grazing incidence angle. The higher energy photon response is enhanced through the use of depth-graded multilayer coatings on the inner radii mirror modules. In this paper we report on the first reflectivity measurements of wedged ribbed silicon pore optics mirror plates coated with a depth graded W/Si multilayer. The measurements demonstrate that the deposition and performance of the multilayer coatings is compatible with the SPO production process.

  11. Current concepts in nuclear pore electrophysiology.

    Science.gov (United States)

    Bustamante, José Omar

    2006-01-01

    Over 4 decades ago, microelectrode studies of in situ nuclei showed that, under certain conditions, the nuclear envelope (NE) behaves as a barrier opposing the nucleocytoplasmic flow of physiological ions. As the nuclear pore complexes (NPCs) of the NE are the only pathways for direct nucleocytoplasmic flow, those experiments implied that the NPCs are capable of restricting ion flow. These early studies validated electrophysiology as a useful approach to quantify some of the mechanisms by which NPCs mediate gene activity and expression. Since electron microscopy (EM) and other non-electrophysiological investigations, showed that the NPC lumen is a nanochannel, the opinion prevailed that the NPC could not oppose the flow of ions and, therefore, that electrophysiological observations resulted from technical artifacts. Consequently, the initial enthusiasm with nuclear electrophysiology faded out in less than a decade. In 1990, nuclear electrophysiology was revisited with patch-clamp, the most powerful electrophysiological technique to date. Patch-clamp has consistently demonstrated that the NE has intrinsic ion channel activity. Direct demonstrations of the NPC on-off ion channel gating behavior were published for artificial conditions in 1995 and for intact living nuclei in 2002. This on-off switching/gating behavior can be interpreted in terms of a metastable energy barrier. In the hope of advancing nuclear electrophysiology, and to complement the other papers contained in this special issue of the journal, here I review some of the main technical, experimental, and theoretical issues of the field, with special focus on NPCs.

  12. The hydraulic conductivity of sediments: A pore size perspective

    KAUST Repository

    Ren, X.W.; Santamarina, Carlos

    2017-01-01

    in the void ratio is higher than the theoretical value due to two concurrent phenomena: 1) percolating large pores are responsible for most of the flow, and 2) the larger pores close first during compaction. The prediction of hydraulic conductivity based

  13. Pore fluids from the argillaceous rocks of the Harwell region

    International Nuclear Information System (INIS)

    Brightman, M.A.; Bath, A.H.; Cave, M.R.; Darling, W.G.

    1985-06-01

    The aim of this work was to obtain samples of pore water from argillaceous formations in the Harwell area for chemical analysis to provide a background for radionuclide migration studies and regional groundwater flow pattern. This report describes the samples, development of a pore-water squeezing cell and its operation. Chemical and analytical studies are summarized. (UK)

  14. Fouling layer characterization and pore-blocking mechanisms in an ...

    African Journals Online (AJOL)

    Fouling layer characterization and pore-blocking mechanisms in an UF membrane externally coupled to a UASB reactor. ... Regarding pore-blocking mechanisms, standard blocking was the predominant mechanism at the beginning of filtration, coexisting at the end of it with cake filtration. In the first filtration cycle (1 h), after ...

  15. Molecular Dynamics Simulations of Hydrophilic Pores in Lipid Bilayers

    NARCIS (Netherlands)

    Leontiadou, Hari; Mark, Alan E.; Marrink, Siewert J.

    Hydrophilic pores are formed in peptide free lipid bilayers under mechanical stress. It has been proposed that the transport of ionic species across such membranes is largely determined by the existence of such meta-stable hydrophilic pores. To study the properties of these structures and understand

  16. The study of the relationship between pore structure and ...

    Indian Academy of Sciences (India)

    Administrator

    The pore structure was determined by the N2 adsorption/desorption method below. 73 K and calculated using the BJH model. TEM characterizations show that the pores are ... Mesoporous TiO2 was obtained by calcination of the gel at 500°C for 6 h in air to remove the surfactant species. The samples were designated as ...

  17. Pore size distribution in tablets measured with a morphological sieve

    NARCIS (Netherlands)

    Wu, Yu San; van Vliet, Lucas J.; Frijlink, Henderik W.; van der Voort Maarschalk, Kees

    2007-01-01

    Porosity and pore structure are important characteristics of tablets, since they influence mechanical strength and many other proper-ties. This paper proposes an alternative method for the characterization of pore structure based on image analysis of SEM micrographs. SEM images were made of sodium

  18. The Pore Structure of Direct Methanol Fuel Cell Electrodes

    DEFF Research Database (Denmark)

    Lund, Peter Brilner

    2005-01-01

    The pore structure and morphology of direct methanol fuel cell electrodes are characterized using mercury intrusion porosimetry and scanning electron microscopy. It is found that the pore size distributions of printed primer and catalyst layers are largely dictated by the powders used to make...

  19. Pore size determination from charged particle energy loss measurement

    International Nuclear Information System (INIS)

    Brady, F.P.; Armitage, B.H.

    1977-01-01

    A new method aimed at measuring porosity and mean pore size in materials has been developed at Harwell. The energy width or variance of a transmitted or backscattered charged particle beam is measured and related to the mean pore size via the assumption that the variance in total path length in the porous material is given by (Δx 2 )=na 2 , where n is the mean number of pores and a the mean pore size. It is shown on the basis of a general and rigorous theory of total path length distribution that this approximation can give rise to large errors in the mean pore size determination particularly in the case of large porosities (epsilon>0.5). In practice it is found that it is not easy to utilize fully the general theory because accurate measurements of the first four moments are required to determine the means and variances of the pore and inter-pore length distributions. Several models for these distributions are proposed. When these are incorporated in the general theory the determinations of mean pore size from experimental measurements on powder samples are in good agreement with values determined by other methods. (Auth.)

  20. A FILTRATION METHOD AND APPARATUS INCLUDING A ROLLER WITH PORES

    DEFF Research Database (Denmark)

    2008-01-01

    The present invention offers a method for separating dry matter from a medium. A separation chamber is at least partly defined by a plurality of rollers (2,7) and is capable of being pressure regulated. At least one of the rollers is a pore roller (7) having a surface with pores allowing permeabi...

  1. Integrative structure and functional anatomy of a nuclear pore complex

    Science.gov (United States)

    Kim, Seung Joong; Fernandez-Martinez, Javier; Nudelman, Ilona; Shi, Yi; Zhang, Wenzhu; Raveh, Barak; Herricks, Thurston; Slaughter, Brian D.; Hogan, Joanna A.; Upla, Paula; Chemmama, Ilan E.; Pellarin, Riccardo; Echeverria, Ignacia; Shivaraju, Manjunatha; Chaudhury, Azraa S.; Wang, Junjie; Williams, Rosemary; Unruh, Jay R.; Greenberg, Charles H.; Jacobs, Erica Y.; Yu, Zhiheng; de La Cruz, M. Jason; Mironska, Roxana; Stokes, David L.; Aitchison, John D.; Jarrold, Martin F.; Gerton, Jennifer L.; Ludtke, Steven J.; Akey, Christopher W.; Chait, Brian T.; Sali, Andrej; Rout, Michael P.

    2018-03-01

    Nuclear pore complexes play central roles as gatekeepers of RNA and protein transport between the cytoplasm and nucleoplasm. However, their large size and dynamic nature have impeded a full structural and functional elucidation. Here we determined the structure of the entire 552-protein nuclear pore complex of the yeast Saccharomyces cerevisiae at sub-nanometre precision by satisfying a wide range of data relating to the molecular arrangement of its constituents. The nuclear pore complex incorporates sturdy diagonal columns and connector cables attached to these columns, imbuing the structure with strength and flexibility. These cables also tie together all other elements of the nuclear pore complex, including membrane-interacting regions, outer rings and RNA-processing platforms. Inwardly directed anchors create a high density of transport factor-docking Phe-Gly repeats in the central channel, organized into distinct functional units. This integrative structure enables us to rationalize the architecture, transport mechanism and evolutionary origins of the nuclear pore complex.

  2. Integrative structure and functional anatomy of a nuclear pore complex.

    Science.gov (United States)

    Kim, Seung Joong; Fernandez-Martinez, Javier; Nudelman, Ilona; Shi, Yi; Zhang, Wenzhu; Raveh, Barak; Herricks, Thurston; Slaughter, Brian D; Hogan, Joanna A; Upla, Paula; Chemmama, Ilan E; Pellarin, Riccardo; Echeverria, Ignacia; Shivaraju, Manjunatha; Chaudhury, Azraa S; Wang, Junjie; Williams, Rosemary; Unruh, Jay R; Greenberg, Charles H; Jacobs, Erica Y; Yu, Zhiheng; de la Cruz, M Jason; Mironska, Roxana; Stokes, David L; Aitchison, John D; Jarrold, Martin F; Gerton, Jennifer L; Ludtke, Steven J; Akey, Christopher W; Chait, Brian T; Sali, Andrej; Rout, Michael P

    2018-03-22

    Nuclear pore complexes play central roles as gatekeepers of RNA and protein transport between the cytoplasm and nucleoplasm. However, their large size and dynamic nature have impeded a full structural and functional elucidation. Here we determined the structure of the entire 552-protein nuclear pore complex of the yeast Saccharomyces cerevisiae at sub-nanometre precision by satisfying a wide range of data relating to the molecular arrangement of its constituents. The nuclear pore complex incorporates sturdy diagonal columns and connector cables attached to these columns, imbuing the structure with strength and flexibility. These cables also tie together all other elements of the nuclear pore complex, including membrane-interacting regions, outer rings and RNA-processing platforms. Inwardly directed anchors create a high density of transport factor-docking Phe-Gly repeats in the central channel, organized into distinct functional units. This integrative structure enables us to rationalize the architecture, transport mechanism and evolutionary origins of the nuclear pore complex.

  3. X-ray microtomography application in pore space reservoir rock

    Energy Technology Data Exchange (ETDEWEB)

    Oliveira, M.F.S.; Lima, I. [Nuclear Instrumentation Laboratory, COPPE/UFRJ, P.O. Box 68509, 21.941-972, Rio de Janeiro (Brazil); Borghi, L. [Geology Department, Geosciences Institute, Federal University of Rio de Janeiro, Brazil. (Brazil); Lopes, R.T., E-mail: ricardo@lin.ufrj.br [Nuclear Instrumentation Laboratory, COPPE/UFRJ, P.O. Box 68509, 21.941-972, Rio de Janeiro (Brazil)

    2012-07-15

    Characterization of porosity in carbonate rocks is important in the oil and gas industry since a major hydrocarbons field is formed by this lithology and they have a complex media porous. In this context, this research presents a study of the pore space in limestones rocks by x-ray microtomography. Total porosity, type of porosity and pore size distribution were evaluated from 3D high resolution images. Results show that carbonate rocks has a complex pore space system with different pores types at the same facies. - Highlights: Black-Right-Pointing-Pointer This study is about porosity parameter in carbonate rocks by 3D X-Ray Microtomography. Black-Right-Pointing-Pointer This study has become useful as data input for modeling reservoir characterization. Black-Right-Pointing-Pointer This technique was able to provide pores, grains and mineralogical differences among the samples.

  4. Measurements of pore-scale flow through apertures

    Energy Technology Data Exchange (ETDEWEB)

    Chojnicki, Kirsten [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States)

    2017-09-01

    Pore-scale aperture effects on flow in pore networks was studied in the laboratory to provide a parameterization for use in transport models. Four cases were considered: regular and irregular pillar/pore alignment with and without an aperture. The velocity field of each case was measured and simulated, providing quantitatively comparable results. Two aperture effect parameterizations were considered: permeability and transmission. Permeability values varied by an order of magnitude between the cases with and without apertures. However, transmission did not correlate with permeability. Despite having much greater permeability the regular aperture case permitted less transmission than the regular case. Moreover, both irregular cases had greater transmission than the regular cases, a difference not supported by the permeabilities. Overall, these findings suggest that pore-scale aperture effects on flow though a pore-network may not be adequately captured by properties such as permeability for applications that are interested in determining particle transport volume and timing.

  5. Abdominal adipose tissue distribution in obese children. US versus CT measurements; Valutazione della distribuzione del tessuto adiposo addominale nei bambini obesi. Confronto tra ecografia e Tomografia Computerizzata

    Energy Technology Data Exchange (ETDEWEB)

    Ferrozzi, F.; Zuccoli, G.; Tognini, G.; Castriota-Scanderbeg, A.; Bacchini, E. [Parma Univ., Parma (Italy). Ist. di Scienze Radiologiche; Bernasconi, S. [Modena Univ., Modena (Italy). Clinica Pediatrica; Campani, R. [Pavia Univ., Pavia (Italy). Ist. di Radiologia

    1999-12-01

    Computed Tomography (CT) and, more recently, ultrasound (US), have proved excellent tools for quantifying adipose tissue distribution. Body fat distribution is an important factor in the treatment of obesity and its complications. In this work it is investigated the correlation between CT and US measurements in pediatric obesity. Forty obese children and adolescents aged 4.1-14.8 years were submitted to CT and US. Intra-abdominal, subcutaneous and total body fat were calculated (in cm{sup 2}), with the CT image analysis software. The rectus muscle-spine and rectus muscle-aorta distances, as indicative of visceral fat thickness, were measured on US images with(out) compression. The distance between skin fat and fat-rectus muscle interfaces was measured as subcutaneous fat thickness. US-CT findings have been compared with other morphometric variables-i.e., patient's (ideal) body weight and skin fold measures. A statistically significant correlation was found between the CT measurement of visceral fat and the aorta-rectus muscle and rectus muscle-spine distances (r=0.80 and 0.74, respectively). The US measurements of subcutaneous fat were correlated with CT subcutaneous fat area (r=0.82). No correlation was found between overweight, as calculated by body mass index, and CT or US fat. In conclusions, the findings indicate that US is as useful as CT in evaluating body fat distribution in pediatric obesity. [Italian] La TC e piu' recentemente l'ecografia si sono dimostrate eccellenti tecniche di valutazione della quantita' e della distribuzione del tessuto adiposo corporeo. La compartimentazione del grasso corporeo ha, infatti, importanti implicazioni per il trattamento dell'obesita' e delle sue complicanze. Scopo dello studio e' stato quello di correlare i risultati ottenuti con la TC con quelli ecografici nella valutazione dell'obesita' del paziente pediatrico. Quaranta bambini obesi con eta' compresa tra 4,1 e 14

  6. HYDROXYETHYL METHACRYLATE BASED NANOCOMPOSITE HYDROGELS WITH TUNABLE PORE ARCHITECTURE

    Directory of Open Access Journals (Sweden)

    Erhan Bat

    2016-10-01

    Full Text Available Hydroxyethyl methacrylate (HEMA based hydrogels have found increasing number of applications in areas such as chromatographic separations, controlled drug release, biosensing, and membrane separations. In all these applications, the pore size and pore interconnectivity are crucial for successful application of these materials as they determine the rate of diffusion through the matrix. 2-Hydroxyethyl methacrylate is a water soluble monomer but its polymer, polyHEMA, is not soluble in water. Therefore, during polymerization of HEMA in aqueous media, a porous structure is obtained as a result of phase separation. Pore size and interconnectivity in these hydrogels is a function of several variables such as monomer concentration, cross-linker concentration, temperature etc. In this study, we investigated the effect of monomer concentration, graphene oxide addition or clay addition on hydrogel pore size, pore interconnectivity, water uptake, and thermal properties. PolyHEMA hydrogels have been prepared by redox initiated free radical polymerization of the monomer using ethylene glycol dimethacrylate as a cross-linker. As a nanofiller, a synthetic hectorite Laponite® XLG and graphene oxide were used. Graphene oxide was prepared by the Tour Method. Pore morphology of the pristine HEMA based hydrogels and nanocomposite hydrogels were studied by scanning electron microscopy. The formed hydrogels were found to be highly elastic and flexible. A dramatic change in the pore structure and size was observed in the range between 22 to 24 wt/vol monomer at 0.5 % of cross-linker. In this range, the hydrogel morphology changes from typical cauliflower architecture to continuous hydrogel with dispersed water droplets forming the pores where the pores are submicron in size and show an interconnected structure. Such controlled pore structure is highly important when these hydrogels are used for solute diffusion or when there’s flow through monolithic hydrogels

  7. Surfactant-enhanced control of track-etch pore morphology

    International Nuclear Information System (INIS)

    Apel', P.Yu.; Blonskaya, I.V.; Didyk, A.Yu.; Dmitriev, S.N.; Orelovich, O.L.; Samojlova, L.I.; Vutsadakis, V.A.; Root, D.

    2000-01-01

    The influence of surfactants on the process of chemical development of ion tracks in polymers is studied. Based on the experimental data, a mechanism of the surfactant effect on the track-etch pore morphology is proposed. In the beginning of etching the surfactant is adsorbed on the surface and creates a layer that is quasi-solid and partially protects the surface from the etching agent. However, some etchant molecules diffuse through the barrier and react with the polymer surface. This results in the formation of a small hole at the entrance to the ion track. After the hole has attained a few annometers in diameter, the surfactant molecules penetrate into the track and cover its walls. Further diffusion of the surfactant into the growing pore is hindered. The adsorbed surfactant layer is not permeable for large molecules. In contrast, small alkali molecules and water molecules diffuse into the track and provide the etching process enlarging the pore. At this stage the transport of the surfactant into the pore channel can proceed only due to the lateral diffusion in the adsorbed layer. The volume inside the pore is free of surfactant molecules and grows at a higher rate than pore entrance. After a more prolonged etching the bottle-like (or 'cigar-like') pore channels are formed. The bottle-like shape of the pore channels depends on the etching conditions such as alkali and surfactant concentration, temperature, and type of the surfactant. The use of surfactants enables one to produce track-etch membranes with improved flow rate characteristics compared with those having cylindrical pores with the same nominal pore diameters

  8. Phosphorus Dynamics in Long-Term Flooded, Drained, and Reflooded Soils

    Directory of Open Access Journals (Sweden)

    Juan Tian

    2017-07-01

    Full Text Available In flooded areas, soils are often exposed to standing water and subsequent drainage, thus over fertilization can release excess phosphorus (P into surface water and groundwater. To investigate P release and transformation processes in flooded alkaline soils, wheat-growing soil and vegetable-growing soil were selected. We flooded-drained-reflooded two soils for 35 d, then drained the soils, and 10 d later reflooded the soils for 17 d. Dissolved reactive phosphorus (DRP, soil inorganic P fractions, Olsen P, pH, and Eh in floodwater and pore water were analyzed. The wheat-growing soil had significantly higher floodwater DRP concentrations than vegetable-growing soil, and floodwater DRP in both soils decreased with the number of flooding days. During the reflooding period, DRP in overlying floodwater from both soils was less than 0.87 mg/L, which was 3–25 times less than that during the flooding period. Regardless of flooding or reflooding, pore water DRP decreased with flooding days. The highest concentration of pore water DRP observed at a 5-cm depth. Under the effect of fertilizing and flooding, the risk of vertical P movement in 10–50 cm was enhanced. P diffusion occurred from the top to the bottom of the soils. After flooding, Al-P increased in both soils, and Fe-P, O-P, Ca2-P decreased, while Fe-P, Al-P, and O-P increased after reflooding, When Olsen P in the vegetable-growing soil exceeded 180.7 mg/kg and Olsen P in the wheat-growing soil exceeded 40.8 mg/kg, the concentration of DRP in pore water increased significantly. Our results showed that changes in floodwater and pore water DRP concentrations, soil inorganic P fractions, and Olsen P are significantly affected by fertilizing and flooding; therefore, careful fertilizer management should be employed on flooded soils to avoid excess P loss.

  9. A statistical image analysis framework for pore-free islands derived from heterogeneity distribution of nuclear pore complexes.

    Science.gov (United States)

    Mimura, Yasuhiro; Takemoto, Satoko; Tachibana, Taro; Ogawa, Yutaka; Nishimura, Masaomi; Yokota, Hideo; Imamoto, Naoko

    2017-11-24

    Nuclear pore complexes (NPCs) maintain cellular homeostasis by mediating nucleocytoplasmic transport. Although cyclin-dependent kinases (CDKs) regulate NPC assembly in interphase, the location of NPC assembly on the nuclear envelope is not clear. CDKs also regulate the disappearance of pore-free islands, which are nuclear envelope subdomains; this subdomain gradually disappears with increase in homogeneity of the NPC in response to CDK activity. However, a causal relationship between pore-free islands and NPC assembly remains unclear. Here, we elucidated mechanisms underlying NPC assembly from a new perspective by focusing on pore-free islands. We proposed a novel framework for image-based analysis to automatically determine the detailed 'landscape' of pore-free islands from a large quantity of images, leading to the identification of NPC intermediates that appear in pore-free islands with increased frequency in response to CDK activity. Comparison of the spatial distribution between simulated and the observed NPC intermediates within pore-free islands showed that their distribution was spatially biased. These results suggested that the disappearance of pore-free islands is highly related to de novo NPC assembly and indicated the existence of specific regulatory mechanisms for the spatial arrangement of NPC assembly on nuclear envelopes.

  10. Small-scale variability in peatland pore-water biogeochemistry, Hudson Bay Lowland, Canada.

    Science.gov (United States)

    Ulanowski, T A; Branfireun, B A

    2013-06-01

    The Hudson Bay Lowland (HBL) of northern Ontario, Manitoba and Quebec, Canada is the second largest contiguous peatland complex in the world, currently containing more than half of Canada's soil carbon. Recent concerns about the ecohydrological impacts to these large northern peatlands resulting from climate change and resource extraction have catalyzed a resurgence in scientific research into this ecologically important region. However, the sheer size, heterogeneity and elaborate landscape arrangements of this ecosystem raise important questions concerning representative sampling of environmental media for chemical or physical characterization. To begin to quantify such variability, this study assessed the small-scale spatial (1m) and short temporal (21 day) variability of surface pore-water biogeochemistry (pH, dissolved organic carbon, and major ions) in a Sphagnum spp.-dominated, ombrotrophic raised bog, and a Carex spp.-dominated intermediate fen in the HBL. In general, pore-water pH and concentrations of dissolved solutes were similar to previously reported literature values from this region. However, systematic sampling revealed consistent statistically significant differences in pore-water chemistries between the bog and fen peatland types, and large within-site spatiotemporal variability. We found that microtopography in the bog was associated with consistent differences in most biogeochemical variables. Temporal changes in dissolved solute chemistry, particularly base cations (Na(+), Ca(2+) and Mg(2+)), were statistically significant in the intermediate fen, likely a result of a dynamic connection between surficial waters and mineral-rich deep groundwater. In both the bog and fen, concentrations of SO4(2-) showed considerable spatial variability, and a significant decrease in concentrations over the study period. The observed variability in peatland pore-water biogeochemistry over such small spatial and temporal scales suggests that under-sampling in

  11. Pore Scale Dynamics of Microemulsion Formation.

    Science.gov (United States)

    Unsal, Evren; Broens, Marc; Armstrong, Ryan T

    2016-07-19

    Experiments in various porous media have shown that multiple parameters come into play when an oleic phase is displaced by an aqueous solution of surfactant. In general, the displacement efficiency is improved when the fluids become quasi-miscible. Understanding the phase behavior oil/water/surfactant systems is important because microemulsion has the ability to generate ultralow interfacial tension (microemulsion formation and the resulting properties under equilibrium conditions. However, the majority of applications where microemulsion is present also involve flow, which has received relatively less attention. It is commonly assumed that the characteristics of an oil/water/surfactant system under flowing conditions are identical to the one under equilibrium conditions. Here, we show that this is not necessarily the case. We studied the equilibrium phase behavior of a model system consisting of n-decane and an aqueous solution of olefin sulfonate surfactant, which has practical applications for enhanced oil recovery. The salt content of the aqueous solution was varied to provide a range of different microemulsion compositions and oil-water interfacial tensions. We then performed microfluidic flow experiments to study the dynamic in situ formation of microemulsion by coinjecting bulk fluids of n-decane and surfactant solution into a T-junction capillary geometry. A solvatochromatic fluorescent dye was used to obtain spatially resolved compositional information. In this way, we visualized the microemulsion formation and the flow of it along with the excess phases. A complex interaction between the flow patterns and the microemulsion properties was observed. The formation of microemulsion influenced the flow regimes, and the flow regimes affected the characteristics of the microemulsion formation. In particular, at low flow rates, slug flow was observed, which had profound consequences on the pore scale mixing behavior and resulting microemulsion properties.

  12. Linking biosensor responses to Cd, Cu and Zn partitioning in soils

    International Nuclear Information System (INIS)

    Dawson, J.J.C.; Campbell, C.D.; Towers, W.; Cameron, C.M.; Paton, G.I.

    2006-01-01

    Soils bind heavy metals according to fundamental physico-chemical parameters. Bioassays, using bacterial biosensors, were performed in pore waters extracted from 19 contrasting soils individually amended with Cd, Cu and Zn concentrations related to the EU Sewage Sludge Directive. The biosensors were responsive to pore waters extracted from Zn amended soils but less so to those of Cu and showed no toxicity to pore water Cd at these environmentally relevant amended concentrations. Across the range of soils, the solid-solution heavy metal partitioning coefficient (K d ) decreased (p d values. Gompertz functions of Cu and Zn, K d values against luminescence explained the relationship between heavy metals and biosensors. Consequently, biosensors provide a link between biologically defined hazard assessments of metals and standard soil-metal physico-chemical parameters for determining critical metal loadings in soils. - Biosensors link biological hazard assessments of metals in soils with physico-chemical partitioning

  13. [Effects of biochar and PAM application on saline soil hydraulic properties of coastal reclamation region].

    Science.gov (United States)

    Cao, Yu Tong; She, Dong Li

    2017-11-01

    Disc infiltration tests were carried out to study the soil infiltration characteristics under different rates of soil amendments application, and to investigate the effects of biochar and polyacrylamide (PAM) application on saline soil hydraulic properties, pore characteristics and contribution of each pore to soil water flow in coastal reclamation region. The results showed that soil satura-ted hydraulic conductivity increased by 46.4% when biochar was applied at 2% compared with the control, and decreased with increasing PAM application. The total effective soil porosity and r>100 μm pores were increased by 8.3% and 10.2% (PPAM application. Particularly, the total effective soil porosity decreased markedly when PAM was applied at 1‰ and the reduction was up to 88%. With the application of biochar and PAM, the contribution of r500 μm played a major role in determining water flows.

  14. Superplastically foaming method to make closed pores inclusive porous ceramics

    International Nuclear Information System (INIS)

    Kishimoto, Akira; Hayashi, Hidetaka

    2011-01-01

    Porous ceramics incorporates pores to improve several properties including thermal insulation maintaining inherenet ceramic properties such as corrosion resistance and large mechanical strength. Conventional porous ceramics is usually fabricated through an insufficient sintering. Since the sintering accompanies the exclusion of pores, it must be terminated at the early stage to maintain the high porosity, leading to degraded strength and durability. Contrary to this, we have innovated superplastically foaming method to make ceramic foams only in the solid state. In this method, the previously inserted foam agent evaporates after the full densification of matrix at around the sintering temperature. Closed pores expand utilizing the superplastic deformation driven by the evolved gas pressure. The typical features of this superplastically foaming method are listed as follows, 1. The pores are introduced after sintering the solid polycrystal. 2. Only closed pores are introduced, improving the insulation of gas and sound in addition to heat. 3. The pore walls are fully densified expecting a large mechanical strength. 4. Compared with the melt foaming method, this method is practical because the fabrication temperature is far below the melting point and it does not need molds. 5. The size and the location pores can be controlled by the amount and position of the foam agent.

  15. Pore formation by actinoporins, cytolysins from sea anemones.

    Science.gov (United States)

    Rojko, Nejc; Dalla Serra, Mauro; Maček, Peter; Anderluh, Gregor

    2016-03-01

    Actinoporins (APs) from sea anemones are ~20 kDa pore forming toxins with a β-sandwich structure flanked by two α-helices. The molecular mechanism of APs pore formation is composed of several well-defined steps. APs bind to membrane by interfacial binding site composed of several aromatic amino acid residues that allow binding to phosphatidylcholine and specific recognition of sphingomyelin. Subsequently, the N-terminal α-helix from the β-sandwich has to be inserted into the lipid/water interphase in order to form a functional pore. Functional studies and single molecule imaging revealed that only several monomers, 3-4, oligomerise to form a functional pore. In this model the α-helices and surrounding lipid molecules build toroidal pore. In agreement, AP pores are transient and electrically heterogeneous. On the contrary, crystallized oligomers of actinoporin fragaceatoxin C were found to be composed of eight monomers with no lipids present between the adjacent α-helices. This article is part of a Special Issue entitled: Pore-Forming Toxins edited by Maur Dalla Serra and Franco Gambale. Copyright © 2015 Elsevier B.V. All rights reserved.

  16. Nuclear Pore-Like Structures in a Compartmentalized Bacterium.

    Directory of Open Access Journals (Sweden)

    Evgeny Sagulenko

    Full Text Available Planctomycetes are distinguished from other Bacteria by compartmentalization of cells via internal membranes, interpretation of which has been subject to recent debate regarding potential relations to Gram-negative cell structure. In our interpretation of the available data, the planctomycete Gemmata obscuriglobus contains a nuclear body compartment, and thus possesses a type of cell organization with parallels to the eukaryote nucleus. Here we show that pore-like structures occur in internal membranes of G.obscuriglobus and that they have elements structurally similar to eukaryote nuclear pores, including a basket, ring-spoke structure, and eight-fold rotational symmetry. Bioinformatic analysis of proteomic data reveals that some of the G. obscuriglobus proteins associated with pore-containing membranes possess structural domains found in eukaryote nuclear pore complexes. Moreover, immunogold labelling demonstrates localization of one such protein, containing a β-propeller domain, specifically to the G. obscuriglobus pore-like structures. Finding bacterial pores within internal cell membranes and with structural similarities to eukaryote nuclear pore complexes raises the dual possibilities of either hitherto undetected homology or stunning evolutionary convergence.

  17. Impedance nanopore biosensor: influence of pore dimensions on biosensing performance.

    Science.gov (United States)

    Kant, Krishna; Yu, Jingxian; Priest, Craig; Shapter, Joe G; Losic, Dusan

    2014-03-07

    Knowledge about electrochemical and electrical properties of nanopore structures and the influence of pore dimensions on these properties is important for the development of nanopore biosensing devices. The aim of this study was to explore the influence of nanopore dimensions (diameter and length) on biosensing performance using non-faradic electrochemical impedance spectroscopy (EIS). Nanoporous alumina membranes (NPAMs) prepared by self-ordered electrochemical anodization of aluminium were used as model nanopore sensing platforms. NPAMs with different pore diameters (25-65 nm) and lengths (4-18 μm) were prepared and the internal pore surface chemistry was modified by covalently attaching streptavidin and biotin. The performance of this antibody nanopore biosensing platform was evaluated using various concentrations of biotin as a model analyte. EIS measurements of pore resistivity and conductivity were carried out for pores with different diameters and lengths. The results showed that smaller pore dimensions of 25 nm and pore lengths up to 10 μm provide better biosensing performance.

  18. State of uranium and radium radionuclides in the soil medium

    International Nuclear Information System (INIS)

    Vojnikova, E.V.; Sokolik, G.A.; Ovsyannikova, S.V.; Popenya, M.V.

    2010-01-01

    The reserves of migratory active, potentially mobile and potentially biologically available forms of uranium and radium in the mineral and organic soils of Belarus have been established. The uranium and radium species in the soil pore waters have been also studied. The received data makes possible the estimation of the radionuclide ability to participate in the processes of biogeochemical migration in terrestrial ecosystems. (authors)

  19. Amendment of arsenic and chromium polluted soil from wood preservation by iron residues from water treatment

    DEFF Research Database (Denmark)

    Nielsen, Sanne Skov; Petersen, L. R.; Kjeldsen, Peter

    2011-01-01

    An iron-rich water treatment residue (WTR) consisting mainly of ferrihydrite was used for immobilization of arsenic and chromium in a soil contaminated by wood preservatives. A leaching batch experiment was conducted using two soils, a highly contaminated soil (1033mgkg−1 As and 371mgkg−1 Cr....... Pore water was extracted during 3years from the amended soil and a control site. Pore water arsenic concentrations in the amended soil were more than two orders of magnitude lower than in the control for the upper samplers. An increased release of arsenic was observed during winter in both fields...

  20. On the role of soil fauna in providing soil functions - a meta study

    Science.gov (United States)

    Lang, Birgit; Russell, David J.; Vogel, Hans-Jörg; Wollschläger, Ute

    2017-04-01

    Fertile soils are fundamental for the production of biomass and therefore for the provision of goods such as food or fuel. However, soils are threatened by e.g. land degradation, but once lost their functionality cannot simply be replaced as soils are complex systems developed over long time periods. Thus, to develop strategies for sustainable soil use and management, we need a comprehensive functional understanding of soil systems. To this end, the interdisciplinary research program "Soil as a Natural Resource for the Bio-Economy - BonaRes" was launched by the German Federal Government in 2015. One part of this program is the development of a Knowledge Centre for soil functions and services. As part of the Knowledge Centre, we focus on the identification and quantification of biological drivers of soil functions. Based on a systematic review of existing literature, we assess the importance of different soil faunal groups for the soil functions and processes most relevant to agricultural production (i.e. decomposition, mineralization, soil structuring. Additionally, we investigate direct impacts of soil fauna on soil properties (e.g. aggregation, pore volume). As site specific conditions such as climate, soil type or management practices affect soil fauna and their performance, these responses must also be taken into account. In the end, our findings will be used in the development of modeling tools aiming to predict the impacts of different management measures on soil ecosystem services and functions.

  1. A Comparison of Soil-Water Sampling Techniques

    Science.gov (United States)

    Tindall, J. A.; Figueroa-Johnson, M.; Friedel, M. J.

    2007-12-01

    The representativeness of soil pore water extracted by suction lysimeters in ground-water monitoring studies is a problem that often confounds interpretation of measured data. Current soil water sampling techniques cannot identify the soil volume from which a pore water sample is extracted, neither macroscopic, microscopic, or preferential flowpath. This research was undertaken to compare values of extracted suction lysimeters samples from intact soil cores with samples obtained by the direct extraction methods to determine what portion of soil pore water is sampled by each method. Intact soil cores (30 centimeter (cm) diameter by 40 cm height) were extracted from two different sites - a sandy soil near Altamonte Springs, Florida and a clayey soil near Centralia in Boone County, Missouri. Isotopically labeled water (O18? - analyzed by mass spectrometry) and bromide concentrations (KBr- - measured using ion chromatography) from water samples taken by suction lysimeters was compared with samples obtained by direct extraction methods of centrifugation and azeotropic distillation. Water samples collected by direct extraction were about 0.25 ? more negative (depleted) than that collected by suction lysimeter values from a sandy soil and about 2-7 ? more negative from a well structured clayey soil. Results indicate that the majority of soil water in well-structured soil is strongly bound to soil grain surfaces and is not easily sampled by suction lysimeters. In cases where a sufficient volume of water has passed through the soil profile and displaced previous pore water, suction lysimeters will collect a representative sample of soil pore water from the sampled depth interval. It is suggested that for stable isotope studies monitoring precipitation and soil water, suction lysimeter should be installed at shallow depths (10 cm). Samples should also be coordinated with precipitation events. The data also indicate that each extraction method be use to sample a different

  2. Soil architecture relationships with dynamic soil physical processes: a conceptual study using natural, artificial, and 3D-printed soil cores

    DEFF Research Database (Denmark)

    Lamandé, Mathieu; Schjønning, Per; Dal Ferro, Nicola

    Pore system architecture is a key feature for understanding physical, biological and chemical processes in soils. Development of visualisation technics, especially x-ray CT, during recent years has been useful in describing the complex relationships between soil architecture and soil functions. We...... believe that combining visualization with physical models is a step further towards a better understanding of these relationships. We conducted a concept study using natural, artificial and 3D-printed soil cores. Eight natural soil cores (100 cm3) were sampled in a cultivated stagnic Luvisol at two depths...... (topsoil and subsoil), representing contrasting soil pore systems. Cylinders (100 cm3) were produced from plastic or from autoclaved aerated concrete. Holes of diameters 1.5 and 3 mm were drilled in the cylinder direction for the plastic cylinder and for one of the AAC cylinders. All natural and artificial...

  3. Novel Techniques to Characterize Pore Size of Porous Materials

    KAUST Repository

    Alabdulghani, Ali J.

    2016-01-01

    Porous materials are implemented in several industrial applications such as water desalination, gas separation and pharmaceutical care which they are mainly governed by the pore size and the PSD. Analyzing shale reservoirs are not excluded from these applications and numerous advantages can be gained by evaluating the PSD of a given shale reservoir. Because of the limitations of the conventional characterization techniques, novel methods for characterizing the PSD have to be proposed in order to obtain better characterization results for the porous materials, in general, and shale rocks in particular. Thus, permporosimetry and evapoporometry (EP) technologies were introduced, designed and utilized for evaluating the two key parameters, pore size and pore size distribution. The pore size and PSD profiles of different shale samples from Norway and Argentina were analyzed using these technologies and then confirmed by mercury intrusion porosimeter (MIP). Norway samples showed an average pore diameter of 12.94 nm and 19.22 nm with an average diameter of 13.77 nm and 23.23 nm for Argentina samples using permporosimetry and EP respectively. Both techniques are therefore indicative of the heterogeneity of the shales. The results from permporosimetry are in good agreement with those obtained from MIP technique, but EP for most part over-estimates the average pore size. The divergence of EP results compared to permporosimetry results is referred to the fact that the latter technique measures only the active pores which is not the case with the former technique. Overall, both techniques are complementary to each other which the results from both techniques seem reasonable and reliable and provide two simple techniques to estimate the pore size and pore size distributions for shale rocks.

  4. Novel Techniques to Characterize Pore Size of Porous Materials

    KAUST Repository

    Alabdulghani, Ali J.

    2016-04-24

    Porous materials are implemented in several industrial applications such as water desalination, gas separation and pharmaceutical care which they are mainly governed by the pore size and the PSD. Analyzing shale reservoirs are not excluded from these applications and numerous advantages can be gained by evaluating the PSD of a given shale reservoir. Because of the limitations of the conventional characterization techniques, novel methods for characterizing the PSD have to be proposed in order to obtain better characterization results for the porous materials, in general, and shale rocks in particular. Thus, permporosimetry and evapoporometry (EP) technologies were introduced, designed and utilized for evaluating the two key parameters, pore size and pore size distribution. The pore size and PSD profiles of different shale samples from Norway and Argentina were analyzed using these technologies and then confirmed by mercury intrusion porosimeter (MIP). Norway samples showed an average pore diameter of 12.94 nm and 19.22 nm with an average diameter of 13.77 nm and 23.23 nm for Argentina samples using permporosimetry and EP respectively. Both techniques are therefore indicative of the heterogeneity of the shales. The results from permporosimetry are in good agreement with those obtained from MIP technique, but EP for most part over-estimates the average pore size. The divergence of EP results compared to permporosimetry results is referred to the fact that the latter technique measures only the active pores which is not the case with the former technique. Overall, both techniques are complementary to each other which the results from both techniques seem reasonable and reliable and provide two simple techniques to estimate the pore size and pore size distributions for shale rocks.

  5. Water retention of repellent and subcritical repellent soils: New insights from model and experimental investigations

    Science.gov (United States)

    Czachor, H.; Doerr, S. H.; Lichner, L.

    2010-01-01

    SummarySoil organic matter can modify the surface properties of the soil mineral phase by changing the surface tension of the mineral surfaces. This modifies the soil's solid-water contact angle, which in turn would be expected to affect its water retention curve (SWRC). Here we model the impact of differences in the soil pore-water contact angle on capillarity in non-cylindrical pores by accounting for their complex pore geometry. Key outcomes from the model include that (i) available methods for measuring the Young's wetting angle on soil samples are insufficient in representing the wetting angle in the soil pore space, (ii) the wetting branch of water retention curves is strongly affected by the soil pore-water contact angle, as manifest in the wetting behavior of water repellent soils, (iii) effects for the drying branch are minimal, indicating that both wettable and water repellent soils should behave similarly, and (vi) water retention is a feature not of only wettable soils, but also soils that are in a water repellent state. These results are tested experimentally by determining drying and wetting branches for (a) 'model soil' (quartz sands with four hydrophobization levels) and (b) five field soil samples with contrasting wettability, which were used with and without the removal of the soil organic matter. The experimental results support the theoretical predictions and indicate that small changes in wetting angle can cause switches between wettable and water repellent soil behavior. This may explain the common observation that relatively small changes in soil water content can cause substantial changes in soil wettability.

  6. Effect of groundwater on soil-structure interaction

    International Nuclear Information System (INIS)

    Xu, J.; Bandyopadhyay, K.K.; Kassir, M.K.

    1995-01-01

    This paper presents results of a parametric study performed to investigate the effect of pore water in saturated soils on the response of nuclear containment structures to seismic motions. The technique employed uses frequency domain algorithm which incorporates impedances for both dry and saturated soils into an SSI model. A frequency domain time history analysis is carried out using the computer code CARES for a typical PWR containment structure. Structural responses presented in terms of floor response spectra indicate that considering the presence of the pore water in soils could benefit the design of massive nuclear containment structures

  7. Transparent soil for imaging the rhizosphere.

    Directory of Open Access Journals (Sweden)

    Helen Downie

    Full Text Available Understanding of soil processes is essential for addressing the global issues of food security, disease transmission and climate change. However, techniques for observing soil biology are lacking. We present a heterogeneous, porous, transparent substrate for in situ 3D imaging of living plants and root-associated microorganisms using particles of the transparent polymer, Nafion, and a solution with matching optical properties. Minerals and fluorescent dyes were adsorbed onto the Nafion particles for nutrient supply and imaging of pore size and geometry. Plant growth in transparent soil was similar to that in soil. We imaged colonization of lettuce roots by the human bacterial pathogen Escherichia coli O157:H7 showing micro-colony development. Micro-colonies may contribute to bacterial survival in soil. Transparent soil has applications in root biology, crop genetics and soil microbiology.

  8. Pore Structures in the Biomineralized Byssus of Anomia simplex

    DEFF Research Database (Denmark)

    Frølich, Simon; Leemreize, Hanna; Thomsen, Jesper Skovhus

    2016-01-01

    that uses a biomineralized byssus to permanently anchor itself to substrates. The byssus has a highly complex hierarchical structure and contains over 90 wt% CaCO3. The byssus features a complex set of porosities, presumed to be highly important for the function of the attachment system. The pore space...... is the main focus of the present work. We characterize the three dimensional distribution of pore spaces in the byssus using micro-computed tomography (µCT) through a combination of in house CT and high-resolution synchrotron CT. The pore structures are observed to fall into distinct categories in various...

  9. Crystalline mesoporous zirconia catalysts having stable tetragonal pore wall structure

    Science.gov (United States)

    Sachtler, W.M.H.; Huang, Y.Y.

    1998-07-28

    Methods are disclosed for the preparation of new sulfated mesoporous zirconia materials/catalysts with crystalline pore walls of predominantly tetragonal crystal structure, characterized by nitrogen physical sorption measurement, X-ray diffraction, transmission electron microscopy and catalytic tests using n-butane isomerization to iso-butane and alkylation of 1-naphthol with 4-tert-butylstyrene as probe reactions. Sulfate deposition is preferred for the transformation of a mesoporous precursor with amorphous pore walls into a material with crystalline pore walls maintaining the mesoporous characteristics. 17 figs.

  10. Tension-induced vesicle fusion: pathways and pore dynamics

    DEFF Research Database (Denmark)

    Shillcock, Julian C.

    2008-01-01

    and eventually opens a pore to complete the fusion process. In pathway II, at higher tension, a stalk is formed during the fusion process that is then transformed by transmembrane pore formation into a fusion pore. Whereas the latter pathway II resembles stalk pathways as observed in other simulation studies......, fusion pathway I, which does not involve any stalk formation, has not been described previously to the best of our knowledge. A statistical analysis of the various processes shows that fusion is the dominant pathway for releasing the tension of the vesicles. The functional dependence of the observed...

  11. Time evolution of pore system in lime - Pozzolana composites

    Science.gov (United States)

    Doleželová, Magdaléna; Čáchová, Monika; Scheinherrová, Lenka; Keppert, Martin

    2017-11-01

    The lime - pozzolana mortars and plasters are used in restoration works on building cultural heritage but these materials are also following the trend of energy - efficient solutions in civil engineering. Porosity and pore size distribution is one of crucial parameters influencing engineering properties of porous materials. The pore size distribution of lime based system is changing in time due to chemical processes occurring in the material. The present paper describes time evolution of pore system in lime - pozzolana composites; the obtained results are useful in prediction of performance of lime - pozzolana systems in building structures.

  12. A free software for pore-scale modelling: solving Stokes equation for velocity fields and permeability values in 3D pore geometries

    KAUST Repository

    Gerke, Kirill; Vasilyev, Roman; Khirevich, Siarhei; Karsanina, Marina; Collins, Daniel; Korost, Dmitry; Mallants, Dirk

    2015-01-01

    In this contribution we introduce a novel free software which solves the Stokes equation to obtain velocity fields for low Reynolds-number flows within externally generated 3D pore geometries. Provided with velocity fields, one can calculate permeability for known pressure gradient boundary conditions via Darcy's equation. Finite-difference schemes of 2nd and 4th order of accuracy are used together with an artificial compressibility method to iteratively converge to a steady-state solution of Stokes' equation. This numerical approach is much faster and less computationally demanding than the majority of open-source or commercial softwares employing other algorithms (finite elements/volumes, lattice Boltzmann, etc.) The software consists of two parts: 1) a pre and post-processing graphical interface, and 2) a solver. The latter is efficiently parallelized to use any number of available cores (the speedup on 16 threads was up to 10-12 depending on hardware). Due to parallelization and memory optimization our software can be used to obtain solutions for 300x300x300 voxels geometries on modern desktop PCs. The software was successfully verified by testing it against lattice Boltzmann simulations and analytical solutions. To illustrate the software's applicability for numerous problems in Earth Sciences, a number of case studies have been developed: 1) identifying the representative elementary volume for permeability determination within a sandstone sample, 2) derivation of permeability/hydraulic conductivity values for rock and soil samples and comparing those with experimentally obtained values, 3) revealing the influence of the amount of fine-textured material such as clay on filtration properties of sandy soil. This work was partially supported by RSF grant 14-17-00658 (pore-scale modelling) and RFBR grants 13-04-00409-a and 13-05-01176-a.

  13. A free software for pore-scale modelling: solving Stokes equation for velocity fields and permeability values in 3D pore geometries

    KAUST Repository

    Gerke, Kirill

    2015-04-01

    In this contribution we introduce a novel free software which solves the Stokes equation to obtain velocity fields for low Reynolds-number flows within externally generated 3D pore geometries. Provided with velocity fields, one can calculate permeability for known pressure gradient boundary conditions via Darcy\\'s equation. Finite-difference schemes of 2nd and 4th order of accuracy are used together with an artificial compressibility method to iteratively converge to a steady-state solution of Stokes\\' equation. This numerical approach is much faster and less computationally demanding than the majority of open-source or commercial softwares employing other algorithms (finite elements/volumes, lattice Boltzmann, etc.) The software consists of two parts: 1) a pre and post-processing graphical interface, and 2) a solver. The latter is efficiently parallelized to use any number of available cores (the speedup on 16 threads was up to 10-12 depending on hardware). Due to parallelization and memory optimization our software can be used to obtain solutions for 300x300x300 voxels geometries on modern desktop PCs. The software was successfully verified by testing it against lattice Boltzmann simulations and analytical solutions. To illustrate the software\\'s applicability for numerous problems in Earth Sciences, a number of case studies have been developed: 1) identifying the representative elementary volume for permeability determination within a sandstone sample, 2) derivation of permeability/hydraulic conductivity values for rock and soil samples and comparing those with experimentally obtained values, 3) revealing the influence of the amount of fine-textured material such as clay on filtration properties of sandy soil. This work was partially supported by RSF grant 14-17-00658 (pore-scale modelling) and RFBR grants 13-04-00409-a and 13-05-01176-a.

  14. Forest soils

    Science.gov (United States)

    Charles H. (Hobie) Perry; Michael C. Amacher

    2009-01-01

    Productive soils are the foundation of sustainable forests throughout the United States. Forest soils are generally subjected to fewer disturbances than agricultural soils, particularly those that are tilled, so forest soils tend to have better preserved A-horizons than agricultural soils. Another major contrast between forest and agricultural soils is the addition of...

  15. Effects of past copper contamination and soil structure on copper leaching from soil

    DEFF Research Database (Denmark)

    Paradelo, M; Møldrup, Per; Arthur, Emmanuel

    2013-01-01

    Copper contamination affects biological, chemical, and physical soil properties and associated ecological functions. Changes in soil pore organization as a result of Cu contamination can dramatically affect flow and contaminant transport in polluted soils. This study assessed the influence of soil...... structure on the movement of water and Cu in a long-term polluted soil. Undisturbed soil cores collected along a Cu gradient (from about 20 to about 3800 mg Cu kg−1 soil) were scanned using X-ray computed tomography (CT). Leaching experiments were performed to analyze tracer transport, colloid leaching......, and dissolved organic carbon (DOC) and Cu losses. The 5% arrival time (t0.05) and apparent dispersivity (λapp) for tracer breakthrough were calculated by fitting the experimental data to a nonparametric, double-lognormal probability density function. Soil bulk density, which did not follow the Cu gradient...

  16. Soil and Soil Water Relationships

    OpenAIRE

    Easton, Zachary M.; Bock, Emily

    2017-01-01

    Discusses the relationships between soil, water and plants. Discusses different types of soil, and how these soils hold water. Provides information about differences in soil drainage. Discusses the concept of water balance.

  17. Conversion of Forests to Arable Land and its Effect on Soil Physical ...

    African Journals Online (AJOL)

    Prof. Ogunji

    Conversion of Forests to Arable Land and its Effect on Soil ... greater hydraulic conductivity than those under cultivation and this may indicate greater pore ... stability and clay dispersion index were 10% higher and 28% lower in the .... degraded the physical properties, making the soil more prone to soil erosion by water.

  18. Mobilization of heavy metals from contaminated paddy soil by EDDS, EDTA, and elemental sulfur

    NARCIS (Netherlands)

    Wang, G.; Koopmans, G.F.; Song, J.; Temminghoff, E.J.M.; Luo, Y.; Zhao, Q.; Japenga, J.

    2007-01-01

    For enhanced phytoextraction, mobilization of heavy metals (HMs) from the soil solid phase to soil pore water is an important process. A pot incubation experiment mimicking field conditions was conducted to investigate the performance of three soil additives in mobilizing HMs from contaminated paddy

  19. Soil CO2 flux in response to wheel traffic in a no-till system

    Science.gov (United States)

    Measurements of soil CO2 flux in the absence of living plants can be used to evaluate the effectiveness of soil management practices for C sequestration, but field CO2 flux is spatially variable and may be affected by soil compaction and percentage of total pore space filled with water (%WFPS). The ...

  20. Hexadecane trapped in nano-pores of silica-aerogel

    International Nuclear Information System (INIS)

    Slavikova, B.; Jesenak, K.; Iskrova, M.; Majernik, V.; Sausa, O.; Kristiak, J.

    2009-01-01

    Ways of filling of the high-porous silica-aerogel with hydrocarbon C 16 H 34 and its efficient removal from the pores by physical method of the Positron Annihilation Spectroscopy were studied. As the most effective way to fill the SiO 2 aerogel appears through the implementation of a liquid phase, while the most appropriate way of removing of hexadecane is firing at an elevated temperature. Molecular system of hexadecane closed in nano-pores of silica-aerogel behaves otherwise than volume system of the same molecules. In the case of pure hexadecane phase transition was observed at 291 K, while solidification process is gradual with decrease of temperature in cetane trapped in pores of silica-aerogel. The results of the periods of life of o-Ps indicate greater turbidity in the pores of the molecular system compared to the volume sample of hexadecane.

  1. A simulation of earthquake induced undrained pore pressure ...

    Indian Academy of Sciences (India)

    R. Narasimhan (Krishtel eMaging) 1461 1996 Oct 15 13:05:22

    Plains, Kandla River and Gulf of Kachch, between .... We consider the role of induced pore pressure ... location of the Bhuj earthquake epicentre as estimated by US Geological Survey. .... war R 2001 Changes in Ocean; GIS @ development 5.

  2. Microfiltration of distillery stillage: Influence of membrane pore size

    Directory of Open Access Journals (Sweden)

    Vasić Vesna M.

    2012-01-01

    Full Text Available Stillage is one of the most polluted waste products of the food industry. Beside large volume, the stillage contains high amount of suspended solids, high values of chemical oxygen demand and biological oxygen demand, so it should not be discharged in the nature before previous purification. In this work, three ceramic membranes for microfiltration with different pore sizes were tested for stillage purification in order to find the most suitable membrane for the filtration process. Ceramic membranes with a nominal pore size of 200 nm, 450 nm and 800 nm were used for filtration. The influence of pore size on permeate flux and removal efficiency was investigated. A membrane with the pore size of 200 nm showed the best filtration performance so it was chosen for the microfiltration process.

  3. Mesoporous Akaganeite of Adjustable Pore Size Synthesized using Mixed Templates

    Science.gov (United States)

    Zhang, Y.; Ge, D. L.; Ren, H. P.; Fan, Y. J.; Wu, L. M.; Sun, Z. X.

    2017-12-01

    Mesoporous akaganeite with large and adjustable pore size was synthesized through a co-template method, which was achieved by the combined interaction between PEG2000 and alkyl amines with different lengths of the straight carbon chain. The characterized results indicate that the synthesized samples show comparatively narrow BJH pore size distributions and centered at 14.3 nm when PEG and HEPA was used, and it could be enlarged to 16.8 and 19.4 nm respectively through changing the alkyl amines to DDA and HDA. Meanwhile, all the synthesized akaganeite possess relativity high specific surface area ranging from 183 to 281 m2/g and high total pore volume of 0.98 to 1.5 cm3/g. A possible mechanism leading to the pore size changing was also proposed.

  4. Diffusion in the pore water of compacted crushed salt

    Energy Technology Data Exchange (ETDEWEB)

    Fluegge, Judith; Herr, Sebastian; Lauke, Thomas; Meleshyn, Artur; Miehe, Ruediger; Ruebel, Andre

    2016-07-15

    Diffusion of dissolved radionuclides in the pore water of compacted crushed salt in the long-term is the most relevant process for the release of radionuclides from a dedicated repository for high-level waste in a salt formation as has been shown in latest safety assessments and research projects /BUH 16/. So far, diffusion coefficients for free water have been applied for the diffusion in pore water in models for long-term safety assessments. This conservative assumption was used, because data on the diffusion coefficient of dissolved substances in crushed salt have been missing. Furthermore, the diffusion coefficient in the pore water was assumed to be constant and independent from the degree of compaction of the crushed salt. The work presented in this report was intended to contribute to fill this gap of knowledge about how the diffusion of radionuclides takes place in the compacted backfill of a repository in salt. For the first time, the pore diffusion coefficient as well as its dependence on the porosity of the crushed salt was determined experimentally by means of through-diffusion experiments using caesium as tracer. The results achieved in this project suggest that the diffusion in compacted crushed salt is not fully comparable to that in a homogeneous, temporally stable porous medium like sand or clay. The results obtained from four diffusion experiments show a remarkably different behaviour and all yield unique concentration versus time plots which includes highly temporal variable tracer fluxes with even full interruptions of the flux for longer periods of time. This effect cannot be explained by assuming a tracer transport by diffusion in a temporarily invariant pore space and / or under temporally invariant experimental conditions. From our point of view, a restructuring of the pore space seems to lead to closed areas of pore water in the sample which may open up again after some time, leading to a variable pore space and hence variable diffusive

  5. Pore Structure and Fractal Characteristics of Niutitang Shale from China

    Directory of Open Access Journals (Sweden)

    Zhaodong Xi

    2018-04-01

    Full Text Available A suite of shale samples from the Lower Cambrian Niutitang Formation in northwestern Hunan Province, China, were investigated to better understand the pore structure and fractal characteristics of marine shale. Organic geochemistry, mineralogy by X-ray diffraction, porosity, permeability, mercury intrusion and nitrogen adsorption and methane adsorption experiments were conducted for each sample. Fractal dimension D was obtained from the nitrogen adsorption data using the fractal Frenkel-Halsey-Hill (FHH model. The relationships between total organic carbon (TOC content, mineral compositions, pore structure parameters and fractal dimension are discussed, along with the contributions of fractal dimension to shale gas reservoir evaluation. Analysis of the results showed that Niutitang shale samples featured high TOC content (2.51% on average, high thermal maturity (3.0% on average, low permeability and complex pore structures, which are highly fractal. TOC content and mineral compositions are two major factors affecting pore structure but they have different impacts on the fractal dimension. Shale samples with higher TOC content had a larger specific surface area (SSA, pore volume (PV and fractal dimension, which enhanced the heterogeneity of the pore structure. Quartz content had a relatively weak influence on shale pore structure, whereas SSA, PV and fractal dimension decreased with increasing clay mineral content. Shale with a higher clay content weakened pore structure heterogeneity. The permeability and Langmuir volume of methane adsorption were affected by fractal dimension. Shale samples with higher fractal dimension had higher adsorption capacity but lower permeability, which is favorable for shale gas adsorption but adverse to shale gas seepage and diffusion.

  6. Direct Numerical Simulation of Low Capillary Number Pore Scale Flows

    Science.gov (United States)

    Esmaeilzadeh, S.; Soulaine, C.; Tchelepi, H.

    2017-12-01

    The arrangement of void spaces and the granular structure of a porous medium determines multiple macroscopic properties of the rock such as porosity, capillary pressure, and relative permeability. Therefore, it is important to study the microscopic structure of the reservoir pores and understand the dynamics of fluid displacements through them. One approach for doing this, is direct numerical simulation of pore-scale flow that requires a robust numerical tool for prediction of fluid dynamics and a detailed understanding of the physical processes occurring at the pore-scale. In pore scale flows with a low capillary number, Eulerian multiphase methods are well-known to produce additional vorticity close to the interface. This is mainly due to discretization errors which lead to an imbalance of capillary pressure and surface tension forces that causes unphysical spurious currents. At the pore scale, these spurious currents can become significantly stronger than the average velocity in the phases, and lead to unphysical displacement of the interface. In this work, we first investigate the capability of the algebraic Volume of Fluid (VOF) method in OpenFOAM for low capillary number pore scale flow simulations. Afterward, we compare VOF results with a Coupled Level-Set Volume of Fluid (CLSVOF) method and Iso-Advector method. It has been shown that the former one reduces the VOF's unphysical spurious currents in some cases, and both are known to capture interfaces sharper than VOF. As the conclusion, we will investigate that whether the use of CLSVOF or Iso-Advector will lead to less spurious velocities and more accurate results for capillary driven pore-scale multiphase flows or not. Keywords: Pore-scale multiphase flow, Capillary driven flows, Spurious currents, OpenFOAM

  7. Interactions between bedforms, turbulence and pore flow

    Science.gov (United States)

    Blois, G.; Best, J.; Sambrook Smith, G.; Hardy, R. J.; Lead, J.

    2010-12-01

    A widespread occurrence of flow-form interaction in rivers is represented by subaqueous bedforms such as dunes. Many models have been proposed to explain how bedform generation and evolution are driven by turbulent flow structures that control the incipient motion of cohesionless sediments and later bedform development. However, most of these models have assumed such bedforms to be migrating over an impermeable bed, and that any surface-subsurface flow interaction is negligible. However, for some gravel-bed rivers the porosity can be high, up to 43%, which may result in significant flow both through the permeable bed (hyporheic flow) and across the surface-subsurface interface. The mass and momentum exchange occurring at the interface may have a strong impact on the structure of turbulent flow in the near-bed region. In the case of a dune, its topography induces a local pressure gradient that enhances flow across the interface. This results in a flow structure that may be radically different from that commonly proposed by past work. This paper presents results from a simplified laboratory model akin to a fine-grained bedform generated on top of a coarser sediment bed. Particle imaging velocimetry (PIV) measurements were conducted in order to characterise flow both over and underneath an idealised 2-dimensional dune (0.41 m long, 0.056 m high and having a leeside angle of 27°) overlaying a packed bed of uniform size spheres (D = 0.04 m diameter). Experiments were conducted in free surface flow conditions (Froude number = 0.1; Reynolds number = 25,000) for one bedform height: flow depth ratio (0.31). The flow above the dune was measured using a standard PIV technique while a novel endoscopic PIV (EPIV) system allowed collection of flow data within the pore spaces beneath the dune. The results show that topographically-induced subsurface flow significantly modifies the structure of flow in the leeside of the dune, resulting in a flow field that is radically different

  8. Rock Physics of Reservoir Rocks with Varying Pore Water Saturation and Pore Water Salinity

    DEFF Research Database (Denmark)

    Katika, Konstantina

    experiments, the rock is subjected to high external stresses that resemble the reservoir stresses; 2) the fluid distribution within the pore space changes during the flow through experiments and wettability alterations may occur; 3) different ions, present in the salt water injected in the core, interact......Advanced waterflooding (injection of water with selective ions in reservoirs) is a method of enhanced oil recovery (EOR) that has attracted the interest of oil and gas companies that exploit the Danish oil and gas reservoirs. This method has been applied successfully in oil reservoirs...... and in the Smart Water project performed in a laboratory scale in order to evaluate the EOR processes in selected core plugs. A major step towards this evaluation is to identify the composition of the injected water that leads to increased oil recovery in reservoirs and to define changes in the petrophysical...

  9. Pore volume and pore size distribution of cement samples measured by a modified mercury intrusion porosimeter

    International Nuclear Information System (INIS)

    Zamorani, E.; Blanchard, H.

    1987-01-01

    Important parameters for the characterization of cement specimens are mechanical properties and porosity. This work is carried out at the Ispra Establishment of the Joint Research Centre in the scope of the Radioactive Waste Management programme. A commercial Mercury Intrusion Porosimeter was modified in an attempt to improve the performance of the instrument and to provide fast processing of the recorded values: pressure-volume of pores. The dead volume of the instrument was reduced and the possibility of leakage from the moving parts eliminated. In addition, the modification allows an improvement of data acquisition thus increasing data accuracy and reproducibility. In order to test the improved performance of the modified instrument, physical characterizations of cement forms were carried out. Experimental procedures and results are reported

  10. Final Report for Subcontract B541028,Pore-Scale Modeling to Support 'Pore Connectivity' Research Work

    International Nuclear Information System (INIS)

    Ewing, R.P.

    2008-01-01

    A central concept for the geological barrier at the proposed Yucca Mountain radioactive waste repository is diffusive retardation: solute moving through a fracture diffuses into and out of the rock matrix. This diffusive exchange retards overall solute movement, and retardation both dilutes waste being released, and allows additional decay. The original concept of diffusive retardation required knowledge only of the fracture conductivity and the matrix diffusion. But that simple concept is unavoidably complicated by other issues and processes: contaminants may sorb to the rock matrix, fracture flow may be episodic, a given fracture may or may not flow depending on the volume of flow and the fracture's connection to the overall fracture network, the matrix imbibes water during flow episodes and dries between episodes, and so on. Some of these issues have been examined by other projects. This particular project is motivated by a simple fact: Yucca Mountain tuff has low pore connectivity. This fact is not widely recognized, nor are its implications widely appreciated. Because low pore connectivity affects many processes, it may invalidate many assumptions that are basic (though perhaps not stated) to other investigations. The overall project's objective statement (from the proposal) was: This proposal aims to improve our understanding of diffusive retardation of radionuclides due to fracture/matrix interactions. Results from this combined experimental/modeling work will (1) determine whether the current understanding and model representation of matrix diffusion is valid, (2) provide insights into the upscaling of laboratory-scale diffusion experiments, and (3) evaluate the impact on diffusive retardation of episodic fracture flow and pore connectivity in Yucca Mountain tuffs. An obvious data gap addressed by the project was that there were only a few limited measurements of the diffusion coefficient of the rock at the repository level. That is, at the time we wrote

  11. Aging of nickel added to soils as predicted by soil pH and time.

    Science.gov (United States)

    Ma, Yibing; Lombi, Enzo; McLaughlin, Mike J; Oliver, Ian W; Nolan, Annette L; Oorts, Koen; Smolders, Erik

    2013-08-01

    Although aging processes are important in risk assessment for metals in soils, the aging of Ni added to soils has not been studied in detail. In this study, after addition of water soluble Ni to soils, the changes over time in isotopic exchangeability, total concentrations and free Ni(2+) activity in soil pore water, were investigated in 16 European soils incubated outdoors for 18 months. The results showed that after Ni addition, concentrations of Ni in soil pore water and isotopic exchangeability of Ni in soils initially decreased rapidly. This phase was followed by further decreases in the parameters measured but these occurred at slower rates. Increasing soil pH increased the rate and extent of aging reactions. Semi-mechanistic models, based on Ni precipitation/nucleation on soil surfaces and micropore diffusion, were developed and calibrated. The initial fast processes, which were attributed to precipitation/nucleation, occurred over a short time (e.g. 1h), afterwards the slow processes were most likely controlled by micropore diffusion processes. The models were validated by comparing predicted and measured Ni aging in three additional, widely differing soils aged outdoors for periods up to 15 months in different conditions. These models could be used to scale ecotoxicological data generated in short-term studies to longer aging times. Copyright © 2013 Elsevier Ltd. All rights reserved.

  12. Pore Scale Analysis of Oil Shale/Sands Pyrolysis

    Energy Technology Data Exchange (ETDEWEB)

    Lin, Chen-Luh [Univ. of Utah, Salt Lake City, UT (United States); Miller, Jan [Univ. of Utah, Salt Lake City, UT (United States)

    2011-03-01

    There are important questions concerning the quality and volume of pore space that is created when oil shale is pyrolyzed for the purpose of producing shale oil. In this report, 1.9 cm diameter cores of Mahogany oil shale were pyrolyzed at different temperatures and heating rates. Detailed 3D imaging of core samples was done using multiscale X-ray computed tomography (CT) before and after pyrolysis to establish the pore structure. The pore structure of the unreacted material was not clear. Selected images of a core pyrolyzed at 400oC were obtained at voxel resolutions from 39 microns (Οm) to 60 nanometers (nm). Some of the pore space created during pyrolysis was clearly visible at these resolutions and it was possible to distinguish between the reaction products and the host shale rock. The pore structure deduced from the images was used in Lattice Boltzmann simulations to calculate the permeability in the pore space. The permeabilities of the pyrolyzed samples of the silicate-rich zone were on the order of millidarcies, while the permeabilities of the kerogen-rich zone after pyrolysis were very anisotropic and about four orders of magnitude higher.

  13. Pore growth in U-Mo/Al dispersion fuel

    Energy Technology Data Exchange (ETDEWEB)

    Kim, Yeon Soo, E-mail: yskim@anl.gov [Argonne National Laboratory, 9700 South Cass Avenue, Argonne, IL 60439 (United States); Jeong, G.Y.; Sohn, D.-S. [Ulsan National Institute of Science and Technology, 50 UNIST-gil, Eonyang-eup, Ulju-gun, Ulsan, 689-798 (Korea, Republic of); Jamison, L.M. [Argonne National Laboratory, 9700 South Cass Avenue, Argonne, IL 60439 (United States)

    2016-09-15

    U-Mo/Al dispersion fuel is currently under development in the DOE’s Material Management and Minimization program to convert HEU-fueled research reactors to LEU-fueled reactors. In some demanding conditions in high-power and high-performance reactors, large pores form in the interaction layers between the U-Mo fuel particles and the Al matrix, which pose a potential to cause fuel failure. In this study, comprehension of the formation and growth of these pores was explored. As a product, a model to predict pore growth and porosity increase was developed. The model includes three major topics: fission gas release from the U-Mo and the IL to the pores, stress evolution in the fuel meat, and the effect of amorphous IL growth. Well-characterized in-pile data from reduced-size plates were used to fit the model parameters. A data set from full-sized plates, independent and distinctively different from those used to fit the model parameters, was used to examine the accuracy of the model. The model showed fair agreement with the measured data. The model suggested that the growth of the IL has a critical effect on pore growth, as both its material properties and energetics are favorable to pore formation. Therefore, one area of the current effort, focused on suppressing IL growth, appears to be on the right track to improve the performance of this fuel.

  14. Pore opening dynamics in the exocytosis of serotonin

    Science.gov (United States)

    Ramirez-Santiago, Guillermo; Cercos, Montserrat G.; Martinez-Valencia, Alejandro; Salinas Hernandez, Israel; Rodríguez-Sosa, Leonardo; de-Miguel, Francisco F.

    2015-03-01

    The current view of the exocytosis of transmitter molecules is that it starts with the formation of a fusion pore that connects the intravesicular and the extracellular spaces, and is completed by the release of the rest of the transmitter contained in the vesicle upon the full fusion and collapse of the vesicle with the plasma membrane. However, under certain circumstances, a rapid closure of the pore before the full vesicle fusion produces only a partial release of the transmitter. Here we show that whole release of the transmitter occurs through fusion pores that remain opened for tens of milliseconds without vesicle collapse. This was demonstrated through amperometric measurements of serotonin release from electrodense vesicles in the axon of leech Retzius neurons and mathematical modelling. By modeling transmitter release with a diffusion equation subjected to boundary conditions that are defined by the experiment, we showed that those pores with a fast half rise time constant remained opened and allowed the full quantum release without vesicle collapse, whereas pores with a slow rise time constant closed rapidly, thus producing partial release. We conclude that a full transmitter release may occur through the fusion pore in the absence of vesicle collapse. This work was founded by a DGAPA-UNAM grants IN200914 and IN118410 CONACYT GRANT 130031, and CONACyT doctoral fellowships.

  15. Three dimensional characterization of soil macroporosity by X-ray microtomography

    International Nuclear Information System (INIS)

    Passoni, Sabrina; Pires, Luiz Fernando; Rosa, Jadir Aparecido

    2015-01-01

    Analysis of the soil pore system represents an important way of characterizing soil structure. Properties such as the shape and number of pores can be determined through soil pore evaluations. This study presents a three-dimensional (3D) characterization of the shape and number of pores of a sub-tropical soil. To do so, a second generation X-ray microtomography equipped with a plain type detector was employed. A voltage of 120 kV and current of 80 mA was applied to the X-ray tube. The soil samples analyzed were collected at three different depths (0-10, 10-20, and 20-30 cm). The results obtained allowed qualitative (images) and quantitative (3D) analyses of the soil structure, revealing the potential of the microtomographic technique, as well as the study of differences in soil macroporosity at different depths. Macroporosity was 5.14 % in the 0-10 cm layer, 5.10 % in the 10-20 cm layer, and 6.64 % in the 20-30 cm layer. The macroporosity of unclassified pores (UN) was 0.30 % (0-10 and 10-20 cm) and 0.40 % (20-30 cm), while equant pores (EQ) had values of 0.01 % at the three depths under analysis. (author)

  16. Three dimensional characterization of soil macroporosity by X-ray microtomography

    Energy Technology Data Exchange (ETDEWEB)

    Passoni, Sabrina [Centro de Ensino Superior dos Campos Gerais, Ponta Grossa, PR (Brazil); Pires, Luiz Fernando, E-mail: lfpires@uepg.br [Universidade Estadual de Ponta Grossa (UFPG), Ponta Grossa, PR (Brazil). Departamento de Fisica; Heck, Richard [University of Guelph, School of Environmental Sciences, Guelph, Ontario (Canada); Rosa, Jadir Aparecido [Instituto Agronomico do Parana, Polo Regional de Pesquisa de Ponta Grossa, Ponta Grossa, PR (Brazil)

    2015-03-15

    Analysis of the soil pore system represents an important way of characterizing soil structure. Properties such as the shape and number of pores can be determined through soil pore evaluations. This study presents a three-dimensional (3D) characterization of the shape and number of pores of a sub-tropical soil. To do so, a second generation X-ray microtomography equipped with a plain type detector was employed. A voltage of 120 kV and current of 80 mA was applied to the X-ray tube. The soil samples analyzed were collected at three different depths (0-10, 10-20, and 20-30 cm). The results obtained allowed qualitative (images) and quantitative (3D) analyses of the soil structure, revealing the potential of the microtomographic technique, as well as the study of differences in soil macroporosity at different depths. Macroporosity was 5.14 % in the 0-10 cm layer, 5.10 % in the 10-20 cm layer, and 6.64 % in the 20-30 cm layer. The macroporosity of unclassified pores (UN) was 0.30 % (0-10 and 10-20 cm) and 0.40 % (20-30 cm), while equant pores (EQ) had values of 0.01 % at the three depths under analysis. (author)

  17. Discovering the essence of soil

    Science.gov (United States)

    Frink, D.

    2012-04-01

    Science, and what it can learn, is constrained by its paradigms and premises. Similarly, teaching and what topics can be addressed are constrained by the paradigms and premises of the subject matter. Modern soil science is founded on the five-factor model of Dokuchaev and Jenny. Combined with Retallack's universal definition of soil as geologic detritus affected by weathering and/or biology, modern soil science emphasizes a descriptive rather than an interpretive approach. Modern soil science however, emerged from the study of plants and the need to improve crop yields in the face of chronic and wide spread famine in Europe. In order to teach that dirt is fascinating we must first see soils in their own right, understand their behavior and expand soil science towards an interpretive approach rather than limited as a descriptive one. Following the advice of James Hutton given over two centuries ago, I look at soils from a physiological perspective. Digestive processes are mechanical and chemical weathering, the resulting constituents reformed into new soil constituents (e.g. clay and humus), translocated to different regions of the soil body to serve other physiological processes (e.g. lamellae, argillic and stone-line horizons), or eliminated as wastes (e.g. leachates and evolved gasses). Respiration is described by the ongoing and diurnal exchange of gasses between the soil and its environment. Circulatory processes are evident in soil pore space, drainage capacity and capillary capability. Reproduction of soil is evident at two different scales: the growth of clay crystals (with their capacity for mutation) and repair of disturbed areas such as result from the various pedo-perturbations. The interactions between biotic and abiotic soil components provide examples of both neurological and endocrine systems in soil physiology. Through this change in perspective, both biotic and abiotic soil processes become evident, providing insight into the possible behavior of

  18. Vertical profile measurements of soil air suggest immobilization of gaseous elemental mercury in mineral soil.

    Science.gov (United States)

    Obrist, Daniel; Pokharel, Ashok K; Moore, Christopher

    2014-02-18

    Evasion of gaseous elemental Hg (Hg(0)g) from soil surfaces is an important source of atmospheric Hg, but the volatility and solid-gas phase partitioning of Hg(0) within soils is poorly understood. We developed a novel system to continuously measure Hg(0)g concentrations in soil pores at multiple depths and locations, and present a total of 297 days of measurements spanning 14 months in two forests in the Sierra Nevada mountains, California, U.S. Temporal patterns showed consistent pore Hg(0)g concentrations below levels measured in the atmosphere (termed Hg(0)g immobilization), ranging from 66 to 94% below atmospheric concentrations throughout multiple seasons. The lowest pore Hg(0)g concentrations were observed in the deepest soil layers (40 cm), but significant immobilization was already present in the top 7 cm. In the absence of sinks or sources, pore Hg(0)g levels would be in equilibrium with atmospheric concentrations due to the porous nature of the soil matrix and gas diffusion. Therefore, we explain decreases in pore Hg(0)g in mineral soils below atmospheric concentrations--or below levels found in upper soils as observed in previous studies--with the presence of an Hg(0)g sink in mineral soils possibly related to Hg(0)g oxidation or other processes such as sorption or dissolution in soil water. Surface chamber measurements showing daytime Hg(0)g emissions and nighttime Hg(0)g deposition indicate that near-surface layers likely dominate net atmospheric Hg(0)g exchange resulting in typical diurnal cycles due to photochemcial reduction at the surface and possibly Hg(0)g evasion from litter layers. In contrast, mineral soils seem to be decoupled from this surface exchange, showing consistent Hg(0)g uptake and downward redistribution--although our calculations indicate these fluxes to be minor compared to other mass fluxes. A major implication is that once Hg is incorporated into mineral soils, it may be unlikely subjected to renewed Hg(0)g re-emission from

  19. Accurate relations between pore size and the pressure of capillary condensation and the evaporation of nitrogen in cylindrical pores.

    Science.gov (United States)

    Morishige, Kunimitsu; Tateishi, Masayoshi

    2006-04-25

    To examine the theoretical and semiempirical relations between pore size and the pressure of capillary condensation or evaporation proposed so far, we constructed an accurate relation between the pore radius and the capillary condensation and evaporation pressure of nitrogen at 77 K for the cylindrical pores of the ordered mesoporous MCM-41 and SBA-15 silicas. Here, the pore size was determined from a comparison between the experimental and calculated X-ray diffraction patterns due to X-ray structural modeling recently developed. Among the many theoretical relations that differ from each other in the degree of theoretical improvements, a macroscopic thermodynamic approach based on Broekhoff-de Boer equations was found to be in fair agreement with the experimental relation obtained in the present study.

  20. Model testing on rainfall-induced landslide of loose soil in Wenchuan earthquake region

    Directory of Open Access Journals (Sweden)

    H. Fang

    2012-03-01

    Full Text Available This study investigates the formation process of rainfall-induced landslide for slopes composed of loose soil in the Wenchuan earthquake region. Experimental investigations have been performed on the landslide's formation and the variation of the controlling soil parameters under various artificial rainfall conditions. The landslide triggering mechanisms can be described in the following way. Firstly, the large porosity of the loose soil facilitated the infiltration of water, which increased the pore water pressure and reduced the shear strength of the soil significantly. In addition, the rainfalls probably caused the concentration of finer particles at a certain depth of the valley slopes. This concentration within the soil increased the pore water pressure significantly, and consequently reduced both the porosity ratio and permeability. Therefore, when the pore water pressure reached a critical state, the effective shear strength of the soil diminished, inducing the landslide's formation.

  1. MD simulation of organics adsorption from aqueous solution in carbon slit-like pores. Foundations of the pore blocking effect

    International Nuclear Information System (INIS)

    Gauden, Piotr A; Terzyk, Artur P; Furmaniak, Sylwester; Zieliński, Wojciech; Włoch, Jerzy; Kowalczyk, Piotr

    2014-01-01

    The results of systematic studies of organics adsorption from aqueous solutions (at the neutral pH level) in a system of slit-like carbon pores having different sizes and oxygen groups located at the pore mouth are reported. Using molecular dynamics simulations (GROMACS package) the properties of adsorbent–adsorbate (benzene, phenol or paracetamol) as well as adsorbent–water systems are discussed. After the introduction of surface oxygen functionalities, adsorption of organic compounds decreases (in accordance with experimental data) and this is caused by the accumulation of water molecules at pore entrances. The pore blocking effect decreases with the diameter of slits and practically vanishes for widths larger than approx. 0.68 nm. We observed the increase in phenol adsorption with the rise in temperature. Moreover, adsorbed molecules occupy the external surface of the slit pores (the entrances) in the case of oxidized adsorbents. Among the studied molecules benzene, phenol and paracetamol prefer an almost flat orientation and with the rise in the pore width the number of molecules oriented in parallel decreases. The decrease or increase in temperature (with respect to 298 K) leads to insignificant changes of angular orientation of adsorbed molecules. (paper)

  2. Pore Water Arsenic Dynamics in Rice Paddies Under Projected Future Climates

    Science.gov (United States)

    Plaganas, M.; Wang, T.; Muehe, E. M.; Fendorf, S. E.

    2016-12-01

    Rice is one of the staple crops in the world, with 50% of the global population eating rice daily. Many rice-producing regions of the world are irrigated with groundwater contaminated with arsenic (As), and in particular South and Southeast Asia, where geogenic As is leached into the groundwater. Use of groundwater pervasively high in As leads to subsequent accumulation in paddy soils. Arsenic, a toxic metalloid, also decreases rice productivity and further jeopardizes food security. Hence, rice agriculture is concerned with its productivity in a climate change impacted future and the particular impacts of arsenic on yields. However, past studies do not address the prevalence of As in paddy soils or its fate in the rhizosphere and ultimate impact on the plant. The objective of our study was to determine changes in pore water As dynamics in the rhizosphere of rice plants grown on As-contaminated paddy soil under climate conditions projected for the end of the century. In order to address this objective, we designed greenhouse chambers with today's climate and projected climate conditions for the year 2100, specifically 5°C increase in temperature and doubled concentration of atmospheric CO2. We hypothesize that the effects of climate change with these conditions will increase the mobility of As in the rhizosphere, and thus, decrease rice growth in As-bearing paddies more than, so far, expected. We examined pore water geochemistry including pH and As concentrations, and correlate that to the height of the plants. Furthermore, the dynamics of other elements in the pore water such as carbon, iron, sulfur, manganese, and silica are further evaluated for their effects on rice growth. Arsenic will have an impact on rice production and conditions induced by future climatic conditions need to be considered for food security. Considering that climate change will decrease the global agricultural output, we should urgently consider adapting our agricultural practices to aid

  3. Synthesis of Novel Mesoporous Silica Materials with Hierarchical Pore Structures

    Energy Technology Data Exchange (ETDEWEB)

    Yoon, Suk Bon; Choi, Wang Kyu; Choi, Byung Seon; Moon, Jei Kwon [Korea Atomic Energy Research Institute, Daejeon (Korea, Republic of)

    2012-05-15

    Porous materials with various pore sizes in the range of micropore (< 2 nm), mesopore (2-50 nm), and macropore (> 50 nm) are attractive due to their many emerging applications such as catalysts, separation systems, and low dielectric constant materials. The discovery of new M41S mesoporous silica families with pore sizes larger than 2 nm in diameter in 1992 extended the applications into much wider pore ranges, bringing in a new prosperous era in porous material research. The synthesis of these silica materials has been mainly accomplished through a self-assembly between surfactant molecules and inorganic species under various pH conditions. Recently, core-shell nanoparticles with a silica core and mesoporous shell under basic conditions were synthesized using the silica nanoparticles as a core, and a silica precursor (TEOS) and cationic surfactant (CTABr) as a material for the formation of the mesoporous shell. The resultant materials were very monodispersive in size and showed a narrow pore size distribution in the range of ca 2-3 nm in diameter, depending on the alkyl-chain length of the surfactants used. In this work, the mesoporous shell coated-fumed silicas (denoted as MS M-5s) were synthesized by using fumed silica instead of the silica nanoparticle as a core based on previous reports. Also, the structural properties of the MS M-5s such as the specific surface area and pore volume were easily controlled by varying the amount of the silica precursor and surfactant. The resultant materials exhibited a BET surface area of ca 279-446 m{sup 2}/g and total pore volume of ca 0.64-0.74 cm{sup 3}/g and showed a narrow pore size distribution (PSD) due to the removal of the organic surfactant molecules

  4. Long-pore Electrostatics in Inward-rectifier Potassium Channels

    Science.gov (United States)

    Robertson, Janice L.; Palmer, Lawrence G.; Roux, Benoît

    2008-01-01

    Inward-rectifier potassium (Kir) channels differ from the canonical K+ channel structure in that they possess a long extended pore (∼85 Å) for ion conduction that reaches deeply into the cytoplasm. This unique structural feature is presumably involved in regulating functional properties specific to Kir channels, such as conductance, rectification block, and ligand-dependent gating. To elucidate the underpinnings of these functional roles, we examine the electrostatics of an ion along this extended pore. Homology models are constructed based on the open-state model of KirBac1.1 for four mammalian Kir channels: Kir1.1/ROMK, Kir2.1/IRK, Kir3.1/GIRK, and Kir6.2/KATP. By solving the Poisson-Boltzmann equation, the electrostatic free energy of a K+ ion is determined along each pore, revealing that mammalian Kir channels provide a favorable environment for cations and suggesting the existence of high-density regions in the cytoplasmic domain and cavity. The contribution from the reaction field (the self-energy arising from the dielectric polarization induced by the ion's charge in the complex geometry of the pore) is unfavorable inside the long pore. However, this is well compensated by the electrostatic interaction with the static field arising from the protein charges and shielded by the dielectric surrounding. Decomposition of the static field provides a list of residues that display remarkable correspondence with existing mutagenesis data identifying amino acids that affect conduction and rectification. Many of these residues demonstrate interactions with the ion over long distances, up to 40 Å, suggesting that mutations potentially affect ion or blocker energetics over the entire pore. These results provide a foundation for understanding ion interactions in Kir channels and extend to the study of ion permeation, block, and gating in long, cation-specific pores. PMID:19001143

  5. Quantifying the effects of soil temperature, moisture and sterilization on elemental mercury formation in boreal soils.

    Science.gov (United States)

    Pannu, Ravinder; Siciliano, Steven D; O'Driscoll, Nelson J

    2014-10-01

    Soils are a source of elemental mercury (Hg(0)) to the atmosphere, however the effects of soil temperature and moisture on Hg(0) formation is not well defined. This research quantifies the effect of varying soil temperature (278-303 K), moisture (15-80% water filled pore space (WFPS)) and sterilization on the kinetics of Hg(0) formation in forested soils of Nova Scotia, Canada. Both, the logarithm of cumulative mass of Hg(0) formed in soils and the reduction rate constants (k values) increased with temperature and moisture respectively. Sterilizing soils significantly (p soils and our results highlight two key processes: (i) a fast abiotic process that peaks at 45% WFPS and depletes a small pool of Hg(0) and; (ii) a slower, rate limiting biotic process that generates a large pool of reducible Hg(II). Copyright © 2014 Elsevier Ltd. All rights reserved.

  6. Analysis of Soil Structure Turnover with Garnet Particles and X-Ray Microtomography.

    Directory of Open Access Journals (Sweden)

    Steffen Schlüter

    Full Text Available Matter turnover in soil is tightly linked to soil structure which governs the heterogeneous distribution of habitats, reaction sites and pathways in soil. Thereby, the temporal dynamics of soil structure alteration is deemed to be important for essential ecosystem functions of soil but very little is known about it. A major reason for this knowledge gap is the lack of methods to study soil structure turnover directly at microscopic scales. Here we devise a conceptual approach and an image processing workflow to study soil structure turnover by labeling some initial state of soil structure with small garnet particles and tracking their fate with X-ray microtomography. The particles adhere to aggregate boundaries at the beginning of the experiment but gradually change their position relative to the nearest pore as structure formation progresses and pores are destructed or newly formed. A new metric based on the contact distances between particles and pores is proposed that allows for a direct quantification of soil structure turnover rates. The methodology is tested for a case study about soil compaction of a silty loam soil during stepwise increase of bulk density (ρ = {1.1, 1.3, 1.5} g/cm3. We demonstrate that the analysis of mean contact distances provides genuinely new insights about changing diffusion pathways that cannot be inferred neither from conventional pore space attributes (porosity, mean pore size, pore connectivity nor from deformation analysis with digital image correlation. This structure labeling approach to quantify soil structure turnover provides a direct analogy to stable isotope labeling for the analysis of matter turnover and can be readily combined with each other.

  7. Analysis of Soil Structure Turnover with Garnet Particles and X-Ray Microtomography.

    Science.gov (United States)

    Schlüter, Steffen; Vogel, Hans-Jörg

    2016-01-01

    Matter turnover in soil is tightly linked to soil structure which governs the heterogeneous distribution of habitats, reaction sites and pathways in soil. Thereby, the temporal dynamics of soil structure alteration is deemed to be important for essential ecosystem functions of soil but very little is known about it. A major reason for this knowledge gap is the lack of methods to study soil structure turnover directly at microscopic scales. Here we devise a conceptual approach and an image processing workflow to study soil structure turnover by labeling some initial state of soil structure with small garnet particles and tracking their fate with X-ray microtomography. The particles adhere to aggregate boundaries at the beginning of the experiment but gradually change their position relative to the nearest pore as structure formation progresses and pores are destructed or newly formed. A new metric based on the contact distances between particles and pores is proposed that allows for a direct quantification of soil structure turnover rates. The methodology is tested for a case study about soil compaction of a silty loam soil during stepwise increase of bulk density (ρ = {1.1, 1.3, 1.5} g/cm3). We demonstrate that the analysis of mean contact distances provides genuinely new insights about changing diffusion pathways that cannot be inferred neither from conventional pore space attributes (porosity, mean pore size, pore connectivity) nor from deformation analysis with digital image correlation. This structure labeling approach to quantify soil structure turnover provides a direct analogy to stable isotope labeling for the analysis of matter turnover and can be readily combined with each other.

  8. Interactions between Soil Texture and Placement of Dairy Slurry Application

    DEFF Research Database (Denmark)

    Glæsner, Nadia; Kjærgaard, Charlotte; Rubæk, Gitte Holton

    2011-01-01

    soils. We compared leaching of slurry-applied bromide through intact soil columns (20 cm diam., 20 cm high) of differing textures following surface application or injection of slurry. The volumetric fraction of soil pores >30 μm ranged from 43% in a loamy sand to 28% in a sandy loam and 15% in a loam...... physical protection against leaching of bromide was reflected by 60.2% of the bromide tracer was recovered in the effluent after injection, compared with 80.6% recovery after surface application. No effect of slurry injection was observed in the loamy sand and sandy loam soils. Our findings point to soil...

  9. Final Report for Subcontract B541028, Pore-Scale Modeling to Support 'Pore Connectivity' Research Work

    International Nuclear Information System (INIS)

    Ewing, R.P.

    2009-01-01

    This report covers modeling aspects of a combined experimental and modeling task in support of the DOE Science and Technology Program (formerly OSTI) within the Office of Civilian Radioactive Waste Management (OCRWM). Research Objectives The research for this project dealt with diffusive retardation: solute moving through a fracture diffuses into and out of the rock matrix. This diffusive exchange retards overall solute movement, and retardation both dilutes waste being released, and allows additional decay. Diffusive retardation involves not only fracture conductivity and matrix diffusion, but also other issues and processes: contaminants may sorb to the rock matrix, fracture flow may be episodic, a given fracture may or may not flow depending on the volume of flow and the fracture's connection to the overall fracture network, the matrix imbibes water during flow episodes and dries between episodes, and so on. The objective of the project was to improve understanding of diffusive retardation of radionuclides due to fracture / matrix interactions. Results from combined experimental/modeling work were to (1) determine whether the current understanding and model representation of matrix diffusion is valid, (2) provide insights into the upscaling of laboratory-scale diffusion experiments, and (3) help in evaluating the impact on diffusive retardation of episodic fracture flow and pore connectivity in Yucca Mountain tuffs. Questions explored included the following: (1) What is the relationship between the diffusion coefficient measured at one scale, to that measured or observed at a different scale? In classical materials this relationship is trivial; in low-connectivity materials it is not. (2) Is the measured diffusivity insensitive to the shape of the sample? Again, in classical materials there should be no sample shape effect. (3) Does sorption affect diffusive exchange in low-connectivity media differently than in classical media? (4) What is the effect of matrix

  10. Factors mediating the restoration of structurally degraded soils

    DEFF Research Database (Denmark)

    Arthur, Emmanuel; Moldrup, Per; Schjønning, Per

    with the ability of soils to perform these functions. The present study examines the roles of clay mineralogy, native organic matter, and exogenous organic material on the restoration of structurally degraded soils. Totally seven soils from Denmark and Ghana - five soils dominated by illites, one kaolinitic soil...... the incubation period, structural stability estimated as the amount of water-dispersible clay decreased with prevailing moisture content, and native organic matter. Also, microbial activity significantly increased with addition of exogenous organic matter. At the end of incubation, there was significant...... macroaggregation, decreased bulk density, and increased equivalent pore diameter and tortuosity (derived from measurements of soil-gas diffusivity and soil-air permeability) for all soils. Although aggregate friability was not affected by clay type, aggregate workability was highest for the kaolinitic soil...

  11. Study of pore pressure reaction on hydraulic fracturing

    Science.gov (United States)

    Trimonova, Mariia; Baryshnikov, Nikolay; Turuntaev, Sergey; Zenchenko, Evgeniy; Zenchenko, Petr

    2017-04-01

    We represent the results of the experimental study of the hydraulic fracture propagation influence on the fluid pore pressure. Initial pore pressure was induced by injection and production wells. The experiments were carried out according to scaling analysis based on the radial model of the fracture. All required geomechanical and hydrodynamical properties of a sample were derived from the scaling laws. So, gypsum was chosen as a sample material and vacuum oil as a fracturing fluid. The laboratory setup allows us to investigate the samples of cylindrical shape. It can be considered as an advantage in comparison with standard cubic samples, because we shouldn't consider the stress field inhomogeneity induced by the corners. Moreover, we can set 3D-loading by this setting. Also the sample diameter is big enough (43cm) for placing several wells: the fracturing well in the center and injection and production wells on two opposite sides of the central well. The experiment consisted of several stages: a) applying the horizontal pressure; b) applying the vertical pressure; c) water solution injection in the injection well with a constant pressure; d) the steady state obtaining; e) the oil injection in the central well with a constant rate. The pore pressure was recorded in the 15 points along bottom side of the sample during the whole experiment. We observe the pore pressure change during all the time of the experiment. First, the pore pressure changed due to water injection. Then we began to inject oil in the central well. We compared the obtained experimental data on the pore pressure changes with the solution of the 2D single-phase equation of pore-elasticity, and we found significant difference. The variation of the equation parameters couldn't help to resolve the discrepancy. After the experiment, we found that oil penetrated into the sample before and after the fracture initiation. This fact encouraged us to consider another physical process - the oil

  12. Pore-scale analysis of the minimum liquid film thickness around elongated bubbles in confined gas-liquid flows

    Science.gov (United States)

    Magnini, M.; Beisel, A. M.; Ferrari, A.; Thome, J. R.

    2017-11-01

    The fluid mechanics of elongated bubbles in confined gas-liquid flows in micro-geometries is important in pore-scale flow processes for enhanced oil recovery and mobilization of colloids in unsaturated soil. The efficiency of such processes is traditionally related to the thickness of the liquid film trapped between the elongated bubble and the pore's wall, which is assumed constant. However, the surface of long bubbles presents undulations in the vicinity of the rear meniscus, which may significantly decrease the local thickness of the liquid film, thus impacting the process of interest. This study presents a systematic analysis of these undulations and the minimum film thickness induced in the range Ca = 0.001- 0.5 and Re = 0.1- 2000 . Pore-scale Computational Fluid Dynamics (CFD) simulations are performed with a self-improved version of the opensource solver ESI OpenFOAM which is based on a Volume of Fluid method to track the gas-liquid interface. A lubrication model based on the extension of the classical axisymmetric Bretherton theory is utilized to better understand the CFD results. The profiles of the rear meniscus of the bubble obtained with the lubrication model agree fairly well with those extracted from the CFD simulations. This study shows that the Weber number of the flow, We = Ca Re , is the parameter that best describes the dynamics of the interfacial waves. When We 0.1, a larger number of wave crests becomes evident on the surface of the rear meniscus of the bubble. The liquid film thickness at the crests of the undulations thins considerably as the Reynolds number is increased, down to less than 60% of the value measured in the flat film region. This may significantly influence important environmental processes, such as the detachment and mobilization of micron-sized pollutants and pathogenic micro-organisms adhering at the pore's wall in unsaturated soil.

  13. Effect of soil saturation on denitrification in a grassland soil

    Directory of Open Access Journals (Sweden)

    L. M. Cardenas

    2017-10-01

    Full Text Available Nitrous oxide (N2O is of major importance as a greenhouse gas and precursor of ozone (O3 destruction in the stratosphere mostly produced in soils. The soil-emitted N2O is generally predominantly derived from denitrification and, to a smaller extent, nitrification, both processes controlled by environmental factors and their interactions, and are influenced by agricultural management. Soil water content expressed as water-filled pore space (WFPS is a major controlling factor of emissions and its interaction with compaction, has not been studied at the micropore scale. A laboratory incubation was carried out at different saturation levels for a grassland soil and emissions of N2O and N2 were measured as well as the isotopocules of N2O. We found that flux variability was larger in the less saturated soils probably due to nutrient distribution heterogeneity created from soil cracks and consequently nutrient hot spots. The results agreed with denitrification as the main source of fluxes at the highest saturations, but nitrification could have occurred at the lower saturation, even though moisture was still high (71 % WFSP. The isotopocules data indicated isotopic similarities in the wettest treatments vs. the two drier ones. The results agreed with previous findings where it is clear there are two N pools with different dynamics: added N producing intense denitrification vs. soil N resulting in less isotopic fractionation.

  14. Soil algae

    African Journals Online (AJOL)

    Timothy Ademakinwa

    Also, the importance of algae in soil formation and soil fertility improvement cannot be over ... The presence of nitrogen fixing microalgae (Nostoc azollae) in the top soil of both vegetable ..... dung, fish food and dirty water from fish ponds on.

  15. Behavior of Ag nanoparticles in soil: Effects of particle surface coating, aging and sewage sludge amendment

    International Nuclear Information System (INIS)

    Whitley, Annie R.; Levard, Clément; Oostveen, Emily; Bertsch, Paul M.; Matocha, Chris J.; Kammer, Frank von der; Unrine, Jason M.

    2013-01-01

    This study addressed the relative importance of particle coating, sewage sludge amendment, and aging on aggregation and dissolution of manufactured Ag nanoparticles (Ag MNPs) in soil pore water. Ag MNPs with citrate (CIT) or polyvinylpyrrolidone (PVP) coatings were incubated with soil or municipal sewage sludge which was then amended to soil (1% or 3% sludge (w/w)). Pore waters were extracted after 1 week and 2 and 6 months and analyzed for chemical speciation, aggregation state and dissolution. Ag MNP coating had profound effects on aggregation state and partitioning to pore water in the absence of sewage sludge, but pre-incubation with sewage sludge negated these effects. This suggests that Ag MNP coating does not need to be taken into account to understand fate of AgMNPs applied to soil through biosolids amendment. Aging of soil also had profound effects that depended on Ag MNP coating and sludge amendment. -- Highlights: •Silver nanoparticle coating affects fate in unamended soils. •Citrated coated silver nanoparticles could be found in pore water for up to six months. •Pre-incubation of silver nanoparticles in sewage sludge negated effects of surface coating. •Weathered or reprecipitated particles found in pore water for up to two months in sludge amended soils. •Particle surface coating, sewage sludge amendment and aging all have important impacts. -- Behavior of manufactured silver nanoparticles in soil depends on surface coating, contact with sewage sludge, and aging

  16. Acoustic characteristics of sand sediment with circular cylindrical pores

    International Nuclear Information System (INIS)

    Roh, Heui-Seol; Lee, Kang-Il; Yoon, Suk-Wang

    2004-01-01

    The acoustic pressure transmission coefficient and the phase velocity are experimentally measured as functions of the frequency and the porosity in sand sediment slabs with circular cylindrical pores filled with water and air. They are also theoretically estimated with the modified Biot-Attenborough (MBA) model, which uses a separate treatment of the viscous and the thermal effects in a non-rigid porous medium with water- and air-filled cylindrical pores. In this study, the fast (first kind) wave and the slow (second kind) wave are not separated in the transmitted signals through a sediment slab without the circular cylindrical pores, but they are separated in the transmitted signals through a sediment slab with pores. Both the phase velocities and the transmission coefficients of the fast wave and the slow wave in the sediment slabs with water- and air-filled cylindrical pores are sensitive to the air and the water porosities. It is proposed that the fast and the slow waves have opposite behaviors for several acoustic characteristics. The generalized tortuosity factor and the dynamic shape factor are introduced from the acoustic characteristics of the fast wave. The experimental results show reasonable agreement with the theoretical results estimated with the MBA model. These results suggest the possibility of predicting the acoustic characteristics of a sediment as functions of arbitrary water and air porosities. This study may also be applicable to understanding acoustic wave propagations in a bubbly liquid sediment for underwater applications and in cancellous bone for the diagnosis of osteoporosis.

  17. Blocking of Single α-Hemolysin Pore by Rhodamine Derivatives.

    Science.gov (United States)

    Rokitskaya, Tatyana I; Nazarov, Pavel A; Golovin, Andrey V; Antonenko, Yuri N

    2017-06-06

    Measurements of ion conductance through α-hemolysin pore in a bilayer lipid membrane revealed blocking of the ion channel by a series of rhodamine 19 and rhodamine B esters. The longest dwell closed time of the blocking was observed with rhodamine 19 butyl ester (C4R1), whereas the octyl ester (C8R1) was of poor effect. Voltage asymmetry in the binding kinetics indicated that rhodamine derivatives bound to the stem part of the aqueous pore lumen. The binding frequency was proportional to a quadratic function of rhodamine concentrations, thereby showing that the dominant binding species were rhodamine dimers. Two levels of the pore conductance and two dwell closed times of the pore were found. The dwell closed times lengthened as the voltage increased, suggesting impermeability of the channel for the ligands. Molecular docking analysis revealed two distinct binding sites within the lumen of the stem of the α-hemolysin pore for the C4R1 dimer, but only one binding site for the C8R1 dimer. The blocking of the α-hemolysin nanopore by rhodamines could be utilized in DNA sequencing as additional optical sensing owing to bright fluorescence of rhodamines if used for DNA labeling. Copyright © 2017 Biophysical Society. Published by Elsevier Inc. All rights reserved.

  18. MODERN ROUTES TO EXPLORE CONCRETE’S COMPLEX PORE SPACE

    Directory of Open Access Journals (Sweden)

    Piet Stroeven

    2011-05-01

    Full Text Available This paper concentrates on discrete element computer-simulation of concrete. It is argued on the basis of stochastic heterogeneity theory that modern concurrent-algorithm-based systems should be employed for the assessment of pore characteristics underlying durability performance of cementitious materials. The SPACE system was developed at Delft University of Technology for producing realistic schematizations of realcrete for a wide range of other particle packing problems, involving aggregate and fresh cement, and for the purpose of exploring characteristics in the hardened state of concrete, including of the pore network structure because of obvious durability problems. Since structure-sensitive properties are involved, schematization of reality should explicitly deal with the configuration of the cement particles in the fresh state. The paper concentrates on the stereological and mathematical morphology operations executed to acquire information on particle size, global porosity, and on distribution of porosity and of the connected pore fraction as a result of the near neighbourhood of aggregate grains. Goal is to provide information obtained along different exploration routes of concrete's pore space for setting up a pore network modelling approach. This type of methodological papers is scarce in concrete technology, if not missing at all. Technical publications that report on obtained results in our investigations are systematically referred to.

  19. Pore-scale simulations of drainage in granular materials: Finite size effects and the representative elementary volume

    Science.gov (United States)

    Yuan, Chao; Chareyre, Bruno; Darve, Félix

    2016-09-01

    A pore-scale model is introduced for two-phase flow in dense packings of polydisperse spheres. The model is developed as a component of a more general hydromechanical coupling framework based on the discrete element method, which will be elaborated in future papers and will apply to various processes of interest in soil science, in geomechanics and in oil and gas production. Here the emphasis is on the generation of a network of pores mapping the void space between spherical grains, and the definition of local criteria governing the primary drainage process. The pore space is decomposed by Regular Triangulation, from which a set of pores connected by throats are identified. A local entry capillary pressure is evaluated for each throat, based on the balance of capillary pressure and surface tension at equilibrium. The model reflects the possible entrapment of disconnected patches of the receding wetting phase. It is validated by a comparison with drainage experiments. In the last part of the paper, a series of simulations are reported to illustrate size and boundary effects, key questions when studying small samples made of spherical particles be it in simulations or experiments. Repeated tests on samples of different sizes give evolution of water content which are not only scattered but also strongly biased for small sample sizes. More than 20,000 spheres are needed to reduce the bias on saturation below 0.02. Additional statistics are generated by subsampling a large sample of 64,000 spheres. They suggest that the minimal sampling volume for evaluating saturation is one hundred times greater that the sampling volume needed for measuring porosity with the same accuracy. This requirement in terms of sample size induces a need for efficient computer codes. The method described herein has a low algorithmic complexity in order to satisfy this requirement. It will be well suited to further developments toward coupled flow-deformation problems in which evolution of the

  20. Effect of Agri-SC as a soil conditioner on runoff, soil loss and crust ...

    African Journals Online (AJOL)

    xp1

    2011-10-10

    Oct 10, 2011 ... 18.50, 37.00, 55.50 and 74.00 l ha-1) on water erosion and crust strengths under laboratory conditions with three .... stability, soil micro morphological properties, response to ... meter resistance, and increased pore space and.

  1. Karst bare slope soil erosion and soil quality: a simulation case study

    OpenAIRE

    Q. Dai; Z. Liu; H. Shao; Z. Yang

    2015-01-01

    The influence on soil erosion by different bedrock bareness ratios, different rainfall intensities, different underground pore fissure degrees and rainfall duration are researched through manual simulation of microrelief characteristics of karst bare slopes and underground karst crack construction in combination with artificial simulation of rainfall experiment. The results show that firstly, when the rainfall intensity is small (30 and 50 mm h−1), no ...

  2. Effect of Initial Hydraulic Conditions on Capillary Rise in a Porous Medium: Pore-Network Modeling

    KAUST Repository

    Joekar-Niasar, V.

    2012-01-01

    The dynamics of capillary rise in a porous medium have been mostly studied in initially dry systems. As initial saturation and initial hydraulic conditions in many natural and industrial porous media can be variable, it is important to investigate the influence of initial conditions on the dynamics of the process. In this study, using dynamic pore-network modeling, we simulated capillary rise in a porous medium for different initial saturations (and consequently initial capillary pressures). Furthermore, the effect of hydraulic connectivity of the wetting phase in corners on the height and velocity of the wetting front was studied. Our simulation results show that there is a trade-off between capillary forces and trapping due to snap-off, which leads to a nonlinear dependence of wetting front velocity on initial saturation at the pore scale. This analysis may provide a possible answer to the experimental observations in the literature showing a non-monotonic dependency between initial saturation and the macroscopic front velocity. © Soil Science Society of America.

  3. Determination of degradation rates of organic substances in the unsaturated soil zone depending on the grain size fractions of various soil types

    Science.gov (United States)

    Fichtner, Thomas; Stefan, Catalin; Goersmeyer, Nora

    2015-04-01

    Rate and extent of the biological degradation of organic substances during transport through the unsaturated soil zone is decisively influenced by the chemical and physical properties of the pollutants such as water solubility, toxicity and molecular structure. Furthermore microbial degradation processes are also influenced by soil-specific properties. An important parameter is the soil grain size distribution on which the pore volume and the pore size depends. Changes lead to changes in air and water circulation as well as preferred flow paths. Transport capacity of water inclusive nutrients is lower in existing bad-drainable fine pores in soils with small grain size fractions than in well-drainable coarse pores in a soil with bigger grain size fractions. Because fine pores are saturated with water for a longer time than the coarse pores and oxygen diffusion in water is ten thousand times slower than in air, oxygen is replenished much slower in soils with small grain size fractions. As a result life and growth conditions of the microorganisms are negatively affected. This leads to less biological activity, restricted degradation/mineralization of pollutants or altered microbial processes. The aim of conducted laboratory column experiments was to study the correlation between the grain size fractions respectively pore sizes, the oxygen content and the biodegradation rate of infiltrated organic substances. Therefore two columns (active + sterile control) were filled with different grain size fractions (0,063-0,125 mm, 0,2-0,63 mm and 1-2 mm) of soils. The sterile soil was inoculated with a defined amount of a special bacteria culture (sphingobium yanoikuae). A solution with organic substances glucose, oxalic acid, sinaphylic alcohol and nutrients was infiltrated from the top in intervals. The degradation of organic substances was controlled by the measurement of dissolved organic carbon in the in- and outflow of the column. The control of different pore volumes

  4. Soil Infrastructure, Interfaces & Translocation Processes in Inner Space ("Soil-it-is": towards a road map for the constraints and crossroads of soil architecture and biophysical processes

    Directory of Open Access Journals (Sweden)

    L. W. de Jonge

    2009-08-01

    Full Text Available Soil functions and their impact on health, economy, and the environment are evident at the macro scale but determined at the micro scale, based on interactions between soil micro-architecture and the transport and transformation processes occurring in the soil infrastructure comprising pore and particle networks and at their interfaces. Soil structure formation and its resilience to disturbance are highly dynamic features affected by management (energy input, moisture (matric potential, and solids composition and complexation (organic matter and clay interactions. In this paper we review and put into perspective preliminary results of the newly started research program "Soil-it-is" on functional soil architecture. To identify and quantify biophysical constraints on soil structure changes and resilience, we claim that new approaches are needed to better interpret processes and parameters measured at the bulk soil scale and their links to the seemingly chaotic soil inner space behavior at the micro scale. As a first step, we revisit the soil matrix (solids phase and pore system (water and air phases, constituting the complementary and interactive networks of soil infrastructure. For a field-pair with contrasting soil management, we suggest new ways of data analysis on measured soil-gas transport parameters at different moisture conditions to evaluate controls of soil matrix and pore network formation. Results imply that some soils form sponge-like pore networks (mostly healthy soils in terms of agricultural and environmental functions, while other soils form pipe-like structures (agriculturally poorly functioning soils, with the difference related to both complexation of organic matter and degradation of soil structure. The recently presented Dexter et al. (2008 threshold (ratio of clay to organic carbon of 10 kg kg−1 is found to be a promising constraint for a soil's ability to maintain or regenerate functional structure. Next

  5. Root induced changes of effective 1D hydraulic properties in a soil column.

    Science.gov (United States)

    Scholl, P; Leitner, D; Kammerer, G; Loiskandl, W; Kaul, H-P; Bodner, G

    Roots are essential drivers of soil structure and pore formation. This study aimed at quantifying root induced changes of the pore size distribution (PSD). The focus was on the extent of clogging vs. formation of pores during active root growth. Parameters of Kosugi's lognormal PSD model were determined by inverse estimation in a column experiment with two cover crops (mustard, rye) and an unplanted control. Pore dynamics were described using a convection-dispersion like pore evolution model. Rooted treatments showed a wider range of pore radii with increasing volumes of large macropores >500 μm and micropores <2.5 μm, while fine macropores, mesopores and larger micropores decreased. The non-rooted control showed narrowing of the PSD and reduced porosity over all radius classes. The pore evolution model accurately described root induced changes, while structure degradation in the non-rooted control was not captured properly. Our study demonstrated significant short term root effects with heterogenization of the pore system as dominant process of root induced structure formation. Pore clogging is suggested as a partial cause for reduced pore volume. The important change in micro- and large macropores however indicates that multiple mechanic and biochemical processes are involved in root-pore interactions.

  6. Studying of the combined salts effect on the engineering properties of clayey soil

    Directory of Open Access Journals (Sweden)

    Al-Obaidi Anwar

    2018-01-01

    Full Text Available In recent years, a number of studies had been performed to investigate the effect of pore water chemistry on the strength and compressibility characteristics of soil. Although the effect of chloride and sulfates salts separately in pore fluids on the geotechnical properties of soil seems to be well understood, but the influence of combined effect of sulfates and chlorides in pore water on the behavior of soil is still unclear mostly due to the limited numbers of studies as well as the complexity of processes that may occur in soil (with the presence of salts in pore water-soil interaction. Southern regions of Iraq, especially Basra suffers from low water levels in the summer season in addition to the lack of rain water, which causes a significant increase of salt in the Shatt al Arab. Water salinity continues to increase with time. To investigate the combined impacts of water salinity on the behavior of clayey soils, the basic characteristics of the soil brought from Al-Nahrawan site was studied. Chemical methods were done with three types of water (distilled, water of highly saline as Shatt Al-Arab water and water of Tarmiya as moderate saline water. The effect of water salinity on the geotechnical properties of fine grain soil was investigated. Different laboratory tests such as Atterberg limits, standard compaction, consolidation and shear strength of soil .Results showed that the presence of perceptible amounts of dissolved salts in water can lead to changes in the engineering properties of the soil.

  7. Why liquid displacement methods are sometimes wrong in estimating the pore-size distribution

    NARCIS (Netherlands)

    Gijsbertsen-Abrahamse, A.J.; Boom, R.M.; Padt, van der A.

    2004-01-01

    The liquid displacement method is a commonly used method to determine the pore size distribution of micro- and ultrafiltration membranes. One of the assumptions for the calculation of the pore sizes is that the pores are parallel and thus are not interconnected. To show that the estimated pore size

  8. Highly Aminated Mesoporous Silica Nanoparticles with Cubic Pore Structure

    KAUST Repository

    Suteewong, Teeraporn

    2011-01-19

    Mesoporous silica with cubic symmetry has attracted interest from researchers for some time. Here, we present the room temperature synthesis of mesoporous silica nanoparticles possessing cubic Pm3n symmetry with very high molar ratios (>50%) of 3-aminopropyl triethoxysilane. The synthesis is robust allowing, for example, co-condensation of organic dyes without loss of structure. By means of pore expander molecules, the pore size can be enlarged from 2.7 to 5 nm, while particle size decreases. Adding pore expander and co-condensing fluorescent dyes in the same synthesis reduces average particle size further down to 100 nm. After PEGylation, such fluorescent aminated mesoporous silica nanoparticles are spontaneously taken up by cells as demonstrated by fluorescence microscopy.

  9. Highly Aminated Mesoporous Silica Nanoparticles with Cubic Pore Structure

    KAUST Repository

    Suteewong, Teeraporn; Sai, Hiroaki; Cohen, Roy; Wang, Suntao; Bradbury, Michelle; Baird, Barbara; Gruner, Sol M.; Wiesner, Ulrich

    2011-01-01

    Mesoporous silica with cubic symmetry has attracted interest from researchers for some time. Here, we present the room temperature synthesis of mesoporous silica nanoparticles possessing cubic Pm3n symmetry with very high molar ratios (>50%) of 3-aminopropyl triethoxysilane. The synthesis is robust allowing, for example, co-condensation of organic dyes without loss of structure. By means of pore expander molecules, the pore size can be enlarged from 2.7 to 5 nm, while particle size decreases. Adding pore expander and co-condensing fluorescent dyes in the same synthesis reduces average particle size further down to 100 nm. After PEGylation, such fluorescent aminated mesoporous silica nanoparticles are spontaneously taken up by cells as demonstrated by fluorescence microscopy.

  10. Influence of crosslinking agents on the pore structure of skin.

    Science.gov (United States)

    Fathima, N Nishad; Dhathathreyan, Aruna; Ramasami, T

    2007-05-15

    Analysis of pore structure of skin is important to understand process of diffusion and adsorption involved during any application of the skin matrix. In this study, the effect of thermal shrinkage on the pore structure of chromium and vegetable treated skin has been analyzed as these tanning agents are known to bring about thermal stability to the matrix. The changes brought about in the pore structure have been studied using mercury intrusion porosimetry and scanning electron microscopy. Response of the chromium treated and vegetable tanning treated skin structure to heat has been found to be quite different from each other. About 41% decrease in porosity is observed for chromium treated skin as against 97% decrease for the skin treated with vegetable tannins. This is primarily attributed to the basic nature of these materials and the nature of interaction of them towards skin.

  11. Earthquake-Induced Liquefaction of Confined Soil Zones: A Centrifuge Study

    Science.gov (United States)

    1993-12-09

    8217. 4.2 Pore pressure transducers (PPT) Pore pressures in the saturated soil were monitored by Druck PDCR 81 pore pressure transducers. This type of pore...PPT5406 -20 MTn-23.3 2 3 4 5 6 7 a 2 10 II 12 Mo, 34 .8 PPT6270 20~ Mlm=-I .2 1 2 3 4 5 6 8 a 1 0 II 12 4 M....7 0 PPT6263 A 3d Moa20.S PPT6260 7 -0 1 2 3

  12. Evaluation of Colloid Retention Site Dominance in Variably Saturated Porous Media: An All Pores Pore-Scale Analysis

    Science.gov (United States)

    Morales, Veronica; Perez-Reche, Francisco; Holzner, Markus; Kinzelbach, Wolfgang

    2016-04-01

    It is well accepted that colloid and nanoparticle transport processes in porous media differ substantially between water saturated and unsaturated conditions. Differences are frequently ascribed to particle immobilization by association with interfaces with the gas, as well as to restrictions of the liquid medium through which colloids are transported. Yet, the current understanding of the importance of particle retention at gas interfaces is based on observations of single pores or two-dimensional pore network representations, leaving open the question of their statistical significance when all pores in the medium are considered. In order to address this question, column experiments were performed using a model porous medium of glass beads through which Silver particles were transported for conditions of varying water content and water chemistry. X-ray microtomography was subsequently employed as a non-destructive imaging technique to obtain pore-scale information of the entire column regarding: i) the presence and distribution of the main locations where colloids can become retained (interfaces with the water-solid, air-water, air-solid, and air-water-solid, grain-grain contacts, and the bulk liquid), ii) deposition profiles of colloids along the column classified by the available retention location, and iii) channel widths of 3-dimensional pore-water network representations. The results presented provide a direct statistical evaluation on the significance of colloid retention by attachment to interfaces or by strainig at contact points where multiple interfaces meet.

  13. Pore-Width-Dependent Preferential Interaction of sp2 Carbon Atoms in Cyclohexene with Graphitic Slit Pores by GCMC Simulation

    Directory of Open Access Journals (Sweden)

    Natsuko Kojima

    2011-01-01

    Full Text Available The adsorption of cyclohexene with two sp2 and four sp3 carbon atoms in graphitic slit pores was studied by performing grand canonical Monte Carlo simulation. The molecular arrangement of the cyclohexene on the graphitic carbon wall depends on the pore width. The distribution peak of the sp2 carbon is closer to the pore wall than that of the sp3 carbon except for the pore width of 0.7 nm, even though the Lennard-Jones size of the sp2 carbon is larger than that of the sp3 carbon. Thus, the difference in the interactions of the sp2 and sp3 carbon atoms of cyclohexene with the carbon pore walls is clearly observed in this study. The preferential interaction of sp2 carbon gives rise to a slight tilting of the cyclohexene molecule against the graphitic wall. This is suggestive of a π-π interaction between the sp2 carbon in the cyclohexene molecule and graphitic carbon.

  14. Dispersion upscaling from a pore scale characterization of Lagrangian velocities

    Science.gov (United States)

    Turuban, Régis; de Anna, Pietro; Jiménez-Martínez, Joaquín; Tabuteau, Hervé; Méheust, Yves; Le Borgne, Tanguy

    2013-04-01

    Mixing and reactive transport are primarily controlled by the interplay between diffusion, advection and reaction at pore scale. Yet, how the distribution and spatial correlation of the velocity field at pore scale impact these processes is still an open question. Here we present an experimental investigation of the distribution and correlation of pore scale velocities and its relation with upscaled dispersion. We use a quasi two-dimensional (2D) horizontal set up, consisting of two glass plates filled with cylinders representing the grains of the porous medium : the cell is built by soft lithography technique, wich allows for full control of the system geometry. The local velocity field is quantified from particle tracking velocimetry using microspheres that are advected with the pore scale flow. Their displacement is purely advective, as the particle size is chosen large enough to avoid diffusion. We thus obtain particle trajectories as well as lagrangian velocities in the entire system. The measured velocity field shows the existence of a network of preferential flow paths in channels with high velocities, as well as very low velocity in stagnation zones, with a non Gaussian distribution. Lagrangian velocities are long range correlated in time, which implies a non-fickian scaling of the longitudinal variance of particle positions. To upscale this process we develop an effective transport model, based on correlated continous time random walk, which is entirely parametrized by the pore scale velocity distribution and correlation. The model predictions are compared with conservative tracer test data for different Peclet numbers. Furthermore, we investigate the impact of different pore geometries on the distribution and correlation of Lagrangian velocities and we discuss the link between these properties and the effective dispersion behavior.

  15. Microfluidic Experiments Studying Pore Scale Interactions of Microbes and Geochemistry

    Science.gov (United States)

    Chen, M.; Kocar, B. D.

    2016-12-01

    Understanding how physical phenomena, chemical reactions, and microbial behavior interact at the pore-scale is crucial to understanding larger scale trends in groundwater chemistry. Recent studies illustrate the utility of microfluidic devices for illuminating pore-scale physical-biogeochemical processes and their control(s) on the cycling of iron, uranium, and other important elements 1-3. These experimental systems are ideal for examining geochemical reactions mediated by microbes, which include processes governed by complex biological phenomenon (e.g. biofilm formation, etc.)4. We present results of microfluidic experiments using a model metal reducing bacteria and varying pore geometries, exploring the limitations of the microorganisms' ability to access tight pore spaces, and examining coupled biogeochemical-physical controls on the cycling of redox sensitive metals. Experimental results will provide an enhanced understanding of coupled physical-biogeochemical processes transpiring at the pore-scale, and will constrain and compliment continuum models used to predict and describe the subsurface cycling of redox-sensitive elements5. 1. Vrionis, H. A. et al. Microbiological and geochemical heterogeneity in an in situ uranium bioremediation field site. Appl. Environ. Microbiol. 71, 6308-6318 (2005). 2. Pearce, C. I. et al. Pore-scale characterization of biogeochemical controls on iron and uranium speciation under flow conditions. Environ. Sci. Technol. 46, 7992-8000 (2012). 3. Zhang, C., Liu, C. & Shi, Z. Micromodel investigation of transport effect on the kinetics of reductive dissolution of hematite. Environ. Sci. Technol. 47, 4131-4139 (2013). 4. Ginn, T. R. et al. Processes in microbial transport in the natural subsurface. Adv. Water Resour. 25, 1017-1042 (2002). 5. Scheibe, T. D. et al. Coupling a genome-scale metabolic model with a reactive transport model to describe in situ uranium bioremediation. Microb. Biotechnol. 2, 274-286 (2009).

  16. Degradation kinetics of ptaquiloside in soil and soil solution.

    Science.gov (United States)

    Ovesen, Rikke Gleerup; Rasmussen, Lars Holm; Hansen, Hans Christian Bruun

    2008-02-01

    Ptaquiloside (PTA) is a carcinogenic norsesquiterpene glycoside produced in bracken (Pteridium aquilinum (L.) Kuhn), a widespread, aggressive weed. Transfer of PTA to soil and soil solution eventually may contaminate groundwater and surface water. Degradation rates of PTA were quantified in soil and soil solutions in sandy and clayey soils subjected to high natural PTA loads from bracken stands. Degradation kinetics in moist soil could be fitted with the sum of a fast and a slow first-order reaction; the fast reaction contributed 20 to 50% of the total degradation of PTA. The fast reaction was similar in all horizons, with the rate constant k(1F) ranging between 0.23 and 1.5/h. The slow degradation, with the rate constant k(1S) ranging between 0.00067 and 0.029/ h, was more than twice as fast in topsoils compared to subsoils, which is attributable to higher microbial activity in topsoils. Experiments with sterile controls confirmed that nonmicrobial degradation processes constituted more than 90% of the fast degradation and 50% of the slow degradation. The lower nonmicrobial degradation rate observed in the clayey compared with the sandy soil is attributed to a stabilizing effect of PTA by clay silicates. Ptaquiloside appeared to be stable in all soil solutions, in which no degradation was observed within a period of 28 d, in strong contrast to previous studies of hydrolysis rates in artificial aqueous electrolytes. The present study predicts that the risk of PTA leaching is controlled mainly by the residence time of pore water in soil, soil microbial activity, and content of organic matter and clay silicates.

  17. Multiscale modelling of dual-porosity porous media; a computational pore-scale study for flow and solute transport

    Science.gov (United States)

    de Vries, Enno T.; Raoof, Amir; van Genuchten, Martinus Th.

    2017-07-01

    Many environmental and agricultural applications involve the transport of water and dissolved constituents through aggregated soil profiles, or porous media that are structured, fractured or macroporous in other ways. During the past several decades, various process-based macroscopic models have been used to simulate contaminant transport in such media. Many of these models consider advective-dispersive transport through relatively large inter-aggregate pore domains, while exchange with the smaller intra-aggregate pores is assumed to be controlled by diffusion. Exchange of solute between the two domains is often represented using a first-order mass transfer coefficient, which is commonly obtained by fitting to observed data. This study aims to understand and quantify the solute exchange term by applying a dual-porosity pore-scale network model to relatively large domains, and analysing the pore-scale results in terms of the classical dual-porosity (mobile-immobile) transport formulation. We examined the effects of key parameters (notably aggregate porosity and aggregate permeability) on the main dual-porosity model parameters, i.e., the mobile water fraction (ϕm) and the mass transfer coefficient (α). Results were obtained for a wide range of aggregate porosities (between 0.082 and 0.700). The effect of aggregate permeability was explored by varying pore throat sizes within the aggregates. Solute breakthrough curves (BTCs) obtained with the pore-scale network model at several locations along the domain were analysed using analytical solutions of the dual-porosity model to obtain estimates of ϕm and α. An increase in aggregate porosity was found to decrease ϕm and increase α, leading to considerable tailing in the BTCs. Changes in the aggregate pore throat size affected the relative flow velocity between the intra- and inter-aggregate domains. Higher flow velocities within the aggregates caused a change in the transport regime from diffusion dominated to more

  18. Silicon pore optics for future x-ray telescopes

    DEFF Research Database (Denmark)

    Wille, Eric; Bavdaz, Marcos; Wallace, Kotska

    2017-01-01

    arcsec or better. These specifications can only be achieved with a novel technology like Silicon Pore Optics, which is being developed by ESA together with a consortium of European industry. Silicon Pore Optics are made of commercial Si wafers using process technology adapted from the semiconductor...... industry. We present the recent upgrades made to the manufacturing processes and equipment, ranging from the manufacture of single mirror plates towards complete focusing mirror modules mounted in flight configuration, and results from first vibration tests. The performance of the mirror modules is tested...

  19. Gas Adsorption in Novel Environments, Including Effects of Pore Relaxation

    International Nuclear Information System (INIS)

    Cole, Milton W; Gatica, Silvina M; Kim, Hye-Young; Lueking, Angela D; Sircar, Sarmishtha

    2012-01-01

    Adsorption experiments have been interpreted frequently with simplified model geometries, such as ideally flat surfaces and slit or cylindrical pores. Recent explorations of unusual environments, such as fullerenes and metal-organic-framework materials, have led to a broadened scope of experimental, theoretical and simulation investigations. This paper reviews a number of such studies undertaken by our group. Among the topics receiving emphasis are these: universality of gas uptake in pores, relaxation of a porous absorbent due to gas uptake and the novel phases of gases on a single nanotube, all of which studies have been motivated by recent experiments.

  20. Role of scaffold mean pore size in meniscus regeneration.

    Science.gov (United States)

    Zhang, Zheng-Zheng; Jiang, Dong; Ding, Jian-Xun; Wang, Shao-Jie; Zhang, Lei; Zhang, Ji-Ying; Qi, Yan-Song; Chen, Xue-Si; Yu, Jia-Kuo

    2016-10-01

    Recently, meniscus tissue engineering offers a promising management for meniscus regeneration. Although rarely reported, the microarchitectures of scaffolds can deeply influence the behaviors of endogenous or exogenous stem/progenitor cells and subsequent tissue formation in meniscus tissue engineering. Herein, a series of three-dimensional (3D) poly(ε-caprolactone) (PCL) scaffolds with three distinct mean pore sizes (i.e., 215, 320, and 515μm) were fabricated via fused deposition modeling. The scaffold with the mean pore size of 215μm significantly improved both the proliferation and extracellular matrix (ECM) production/deposition of mesenchymal stem cells compared to all other groups in vitro. Moreover, scaffolds with mean pore size of 215μm exhibited the greatest tensile and compressive moduli in all the acellular and cellular studies. In addition, the relatively better results of fibrocartilaginous tissue formation and chondroprotection were observed in the 215μm scaffold group after substituting the rabbit medial meniscectomy for 12weeks. Overall, the mean pore size of 3D-printed PCL scaffold could affect cell behavior, ECM production, biomechanics, and repair effect significantly. The PCL scaffold with mean pore size of 215μm presented superior results both in vitro and in vivo, which could be an alternative for meniscus tissue engineering. Meniscus tissue engineering provides a promising strategy for meniscus regeneration. In this regard, the microarchitectures (e.g., mean pore size) of scaffolds remarkably impact the behaviors of cells and subsequent tissue formation, which has been rarely reported. Herein, three three-dimensional poly(ε-caprolactone) scaffolds with different mean pore sizes (i.e., 215, 320, and 515μm) were fabricated via fused deposition modeling. The results suggested that the mean pore size significantly affected the behaviors of endogenous or exogenous stem/progenitor cells and subsequent tissue formation. This study furthers

  1. Dynamics of phase ordering of nematics in a pore

    International Nuclear Information System (INIS)

    Bhattacharya, A.; Chakrabarti, A.

    1994-06-01

    We study the kinetics of phase ordering of a nematic liquid crystal, modeled by a spin-rotor Hamiltonian, confined within a parallel piped pore. The dynamics of the rotor obeys the time-dependent Ginzburg-Landau equation. We study the generation and evolution of a variety of defect structures, and the growth of domains, with different anchoring conditions at the pore surface. Unlike in binary fluids, mere confinement with no anchoring field, does not result in slow dynamics. Homeotropic anchoring, however, leads to slow logarithmic growth. Interestingly, homogeneous anchoring dynamically generates wall defects, resulting in an Ising like structure factor at late times. (author). 27 refs, 4 figs

  2. Soil microbes and soil respiration of Mongolian Steppe soils under grazing stress.

    Science.gov (United States)

    Bölter, Manfred; Krümmelbein, Julia; Horn, Rainer; Möller, Rolf; Scheltz, Annette

    2012-04-01

    Soils of Northern China were analysed for their microbiological and soil physical properties with respect to different grazing stress. An important factor for this is soil compaction and related aeration due to pore size shifts. Bulk density increases significantly with increasing grazing intensity and soil carbon contents show decreasing values from top to depth. Organic carbon (LOI) concentrations decrease significantly with increasing grazing intensity. The data on LOI (2-5.8%) approximate 10-30 mg C, our data on glucose show values between 0.4-1.2 mg, i.e. approx. 4% of total carbon. Numbers and biomass of bacteria show generally a decreasing trend of those data at grazed and ungrazed sites, numbers range between 0.4 and 8.7 x10(8) g(-1) d.wt., bacterial biomass between 0.4 and 3.8 microg Cg(-1). This need to be recorded in relation to soil compaction and herewith-hampered aeration and nutrient flow. The temperature-respiration data also allow getting an idea of the Q10-values for soil respiration. The data are between 2.24 (5-15 degrees C) and 1.2 (25-35 degrees C). Our data are presented with a general review of biological properties of Mongolian Steppe soils.

  3. Radon emanation coefficients in sandy soils

    International Nuclear Information System (INIS)

    Holy, K.; Polaskova, A.; Baranova, A.; Sykora, I.; Hola, O.

    1998-01-01

    In this contribution the results of the study of an influence of the water content on the emanation coefficient for two sandy soil samples are reported. These samples were chosen on the because of the long-term continual monitoring of the 222 Rn concentration just in such types of soils and this radon concentration showed the significant variations during a year. These variations are chiefly given in connection with the soil moisture. Therefore, the determination of the dependence of the emanation coefficient of radon on the water content can help to evaluate the influence of the soil moisture variations of radon concentrations in the soil air. The presented results show that the emanation coefficient reaches the constant value in the wide interval of the water content for both sandy soil samples. Therefore, in the common range of the soil moisture (5 - 20 %) it is impossible to expect the variations of the radon concentration in the soil air due to the change of the emanation coefficient. The expressive changes of the radon concentration in the soil air can be observed in case of the significant decrease of the emanation coefficient during the soil drying when the water content decreases under 5 % or during the complete filling of the soil pores by the water. (authors)

  4. The role of Soil Water Retention Curve in slope stability analysis in unsaturated and heterogeneous soils.

    Science.gov (United States)

    Antinoro, Chiara; Arnone, Elisa; Noto, Leonardo V.

    2015-04-01

    The mechanisms of rainwater infiltration causing slope instability had been analyzed and reviewed in many scientific works. Rainwater infiltration into unsaturated soil increases the degree of saturation, hence affecting the shear strength properties and thus the probability of slope failure. It has been widely proved that the shear strength properties change with the soil water suction in unsaturated soils; therefore, the accuracy to predict the relationship between soil water content and soil water suction, parameterized by the soil-water characteristic curve, has significant effects on the slope stability analysis. The aim of this study is to investigate how the characterization of SWRC of differently structured unsaturated soils affects the slope stability on a simple infinite slope. In particular, the unimodal and bimodal distributions of the soil pore size were compared. Samples of 40 soils, highly different in terms of structure and texture, were collected and used to calibrate two bimodal SWRCs, i.e. Ross and Smettem (1993) and Dexter et al., (2008). The traditional unimodal van Genuchten (1980) model was also applied for comparison. Slope stability analysis was conducted in terms of Factor of Safety (FS) by applying the infinite slope model for unsaturated soils. In the used formulation, the contribution of the suction effect is tuned by a parameter 'chi' in a rate proportional to the saturation conditions. Different parameterizations of this term were also compared and analyzed. Results indicated that all three SWRC models showed good overall performance in fitting the sperimental SWRCs. Both the RS and DE models described adequately the water retention data for soils with a bimodal behavior confirmed from the analysis of pore size distribution, but the best performance was obtained by DE model confirmed. In terms of FS, the tree models showed very similar results as soil moisture approached to the saturated condition; however, within the residual zone

  5. Soil Physical Constraints on Intrinsic Biodegradation of Petroleum Vapors in a Layered Subsurface

    DEFF Research Database (Denmark)

    Kristensen, Andreas Houlberg; Henriksen, Kaj; Mortensen, Lars

    2010-01-01

    Intrinsic biodegradation of organic contaminants in the soil vadose zone depends on site-specific soil properties controlling biophysical and geochemical interactions within the soil pore space. In this study we evaluated the effect of soil texture and moisture conditions on aerobic biodegradatio...... in the deep vadose zone. As a result, management of petroleum hydrocarbon spill sites will benefit from site-specific conceptual models in which the vadose zone is divided into geological compartments with different biophysical potential for biodegradation and bioremediation....

  6. Pore facies analysis: incorporation of rock properties into pore geometry based classes in a Permo-Triassic carbonate reservoir in the Persian Gulf

    International Nuclear Information System (INIS)

    Rahimpour-Bonab, H; Aliakbardoust, E

    2014-01-01

    Pore facies analysis is a useful method for the classification of reservoir rocks according to pore geometry characteristics. The importance of this method is related to the dependence of the dynamic behaviour of the reservoir rock on the pore geometry. In this study, pore facies analysis was performed by the quantification and classification of the mercury injection capillary pressure (MICP) curves applying the multi-resolution graph-based clustering (MRGC) method. Each pore facies includes a limited variety of rock samples with different depositional fabrics and diagenetic histories, which are representative of one type of pore geometry. The present pore geometry is the result of the interaction between the primary rock fabric and its diagenetic overprint. Thus the variations in petrographic properties can be correlated with the pore geometry characteristics. Accordingly, the controlling parameters in the pore geometry characteristics were revealed by detailed petrographic analysis in each pore facies. The reservoir rock samples were then classified using the determined petrographic properties which control the pore system quality. This method is proposed for the classification of reservoir rocks in complicated carbonate reservoirs, in order to reduce the incompatibility of traditional facies analysis with pore system characteristics. The method is applicable where enough capillary pressure data is not available. (papers)

  7. Uranium and radium content in the soil solutions of the south-western part of Belarus

    International Nuclear Information System (INIS)

    Sokolik, G.A.; Ovsyannikova, S.V.; Vojnikova, E.V.; Popenya, M.V.

    2008-01-01

    The contents of uranium and radium in the pore soil solutions, which are the main chain in the geochemical and biological migration of the chemical elements, has been determined for the first time in Belarus. The control sites have been located outside the zone of Chernobyl fallout radionuclide contamination, that allowed evaluating the current background level of uranium and radium content in the soil solutions. The data on accumulation of the radioactive elements in the pore solutions give the opportunity to estimate the reserve of the radioactive elements in the migratory active forms in the soils. In the majority of soils studied, uranium content in the pore solution is higher than radium content, that points to the higher migratory ability of uranium. The direct correlation between content of fulvic acids' components in the soil solutions and accumulation of uranium in such solutions has been established. (authors)

  8. Capillary pressure-saturation relationships for porous granular materials: Pore morphology method vs. pore unit assembly method

    Science.gov (United States)

    Sweijen, Thomas; Aslannejad, Hamed; Hassanizadeh, S. Majid

    2017-09-01

    In studies of two-phase flow in complex porous media it is often desirable to have an estimation of the capillary pressure-saturation curve prior to measurements. Therefore, we compare in this research the capability of three pore-scale approaches in reproducing experimentally measured capillary pressure-saturation curves. To do so, we have generated 12 packings of spheres that are representative of four different glass-bead packings and eight different sand packings, for which we have found experimental data on the capillary pressure-saturation curve in the literature. In generating the packings, we matched the particle size distributions and porosity values of the granular materials. We have used three different pore-scale approaches for generating the capillary pressure-saturation curves of each packing: i) the Pore Unit Assembly (PUA) method in combination with the Mayer and Stowe-Princen (MS-P) approximation for estimating the entry pressures of pore throats, ii) the PUA method in combination with the hemisphere approximation, and iii) the Pore Morphology Method (PMM) in combination with the hemisphere approximation. The three approaches were also used to produce capillary pressure-saturation curves for the coating layer of paper, used in inkjet printing. Curves for such layers are extremely difficult to determine experimentally, due to their very small thickness and the presence of extremely small pores (less than one micrometer in size). Results indicate that the PMM and PUA-hemisphere method give similar capillary pressure-saturation curves, because both methods rely on a hemisphere to represent the air-water interface. The ability of the hemisphere approximation and the MS-P approximation to reproduce correct capillary pressure seems to depend on the type of particle size distribution, with the hemisphere approximation working well for narrowly distributed granular materials.

  9. Material dynamics in polluted soils with different structures - comparative investigations of general soil and aggregates

    International Nuclear Information System (INIS)

    Taubner, H.

    1992-01-01

    In structured soils, a small-scale heterogeneity of physical and chemical properties will develop which results in a reduced availability of the reaction sites of the soil matrix. In view of the lack of knowledge on the conditions within the individual aggregates were carried out for characterizing the aggregates and comparing them with the soil in, general soil samples were taken from natural structure of a podzolic soil and a podazolic brown earth from two sites in the Fichtelgebirge mountains as well as a parabraun earth from East Holstein. The horizons differed with regard to their texture and structure; silty material tends to have a subpolyhedral structure and calyey material a polyhedral structure. The general soil samples and aggregate samples from the three B horizons were subjected, with comparable experimental conditions, to percolation experiments inducing a multiple acid load. The soil solution from the secondary pore system and aggregate pore system is more heterogeneus for the higher-structured subpolyhedral texture of the perdzolic soil than for the less strongly aggregated subpolyhedral structured of the podzolic brown earth. (orig.) [de

  10. Soils and public health: the vital nexus

    Science.gov (United States)

    Pachepsky, Yakov

    2015-04-01

    Soils sustain life. They affect human health via quantity, quality, and safety of available food and water, and via direct exposure of individuals to soils. Throughout the history of civilization, soil-health relationships have inspired spiritual movements, philosophical systems, cultural exchanges, and interdisciplinary interactions, and provided medicinal substances of paramount impact. Given the climate, resource, and population pressures, understanding and managing the soil-health interactions becomes a modern imperative. We are witnessing a paradigm shift from recognizing and yet disregarding the 'soil-health' nexus complexity to parameterizing this complexity and identifying reliable controls. This becomes possible with the advent of modern research tools as a source of 'big data' on multivariate nonlinear soil systems and the multiplicity of health metrics. The phenomenon of suppression of human pathogens in soils and plants presents a recent example of these developments. Evidence is growing about the dependence of pathogen suppression on the soil microbial community structure which, in turn, is affected by the soil-plant system management. Soil eutrophication appears to create favorable conditions for pathogen survival. Another example of promising information-rich research considers links and feedbacks between the soil microbial community structure and structure of soil physical pore space. The two structures are intertwined and involved in the intricate self-organization that controls soil services to public health. This, in particular, affects functioning of soils as a powerful water filter and the capacity of this filter with respect to emerging contaminants in both 'green' and 'blue' waters. To evaluate effects of soil services to public health, upscaling procedures are needed for relating the fine-scale mechanistic knowledge to available coarse-scale information on soil properties and management. More needs to be learned about health effects of soils

  11. Comparison between monitored and modeled pore water pressure and safety factor in a slope susceptible to shallow landslides

    Science.gov (United States)

    Bordoni, Massimiliano; Meisina, Claudia; Zizioli, Davide; Valentino, Roberto; Bittelli, Marco; Chersich, Silvia

    2014-05-01

    Shallow landslides can be defined as slope movements affecting superficial deposits of small thicknesses which are usually triggered due to extreme rainfall events, also very concentrated in time. Shallow landslides are hazardous phenomena: in particular, if they happen close to urbanized areas they could cause significant damages to cultivations, structures, infrastructures and, sometimes, human losses. The triggering mechanism of rainfall-induced shallow landslides is strictly linked with the hydrological and mechanical responses of usually unsaturated soils to rainfall events. For this reason, it is fundamental knowing the intrinsic hydro-mechanical properties of the soils in order to assess both susceptibility and hazard of shallow landslide and to develop early-warning systems at large scale. The hydrological data collected by a 20 months monitoring on a slope susceptible to shallow landslides in an area of the North -Eastern Oltrepo Pavese (Northern Apennines, Italy) were used to identify the hydrological behaviors of the investigated soils towards rainfall events. Field conditions under different rainfall trends have also been modeled by using both hydrological and physically-based stability models for the evaluation of the slope safety factor . The main objectives of this research are: (a) to compare the field measured pore water pressures at different depths with results of hydrological models, in order to evaluate the efficiency of the tested models and to determine how precipitations affect pore pressure development; (b) to compare the time trends of the safety factor that have been obtained by applying different stability models; (c) to evaluate, through a sensitivity analysis, the effects of soil hydrological properties on modeling pore water pressure and safety factor. The test site slope where field measurements were acquired is representative of other sites in Northern Apennines affected by shallow landslides and is characterized by medium

  12. Slow reaction of soil structure to conservation agriculture practices in Veneto silty soils (North-Easter Italy)

    Science.gov (United States)

    Piccoli, Ilaria; Camarotto, Carlo; Lazzaro, Barbara; Furlan, Lorenzo; Morari, Francesco

    2017-04-01

    Soil structure plays a pivotal role in soil functioning and can inform of the degradation of the soil ecosystem. Intensive and repeated tillage operations have been known to negatively affect the soil structure characteristics while conservation agriculture (CA) practices were demonstrated to improve soil structure and related ecosystem services. The aim of this study is to evaluate the effect of conservation agriculture practices on total porosity, pore size distribution, pore architecture and morphology on silty soils of Veneto low-lying plain (North-Eastern Italy). Experimental design was established in 2010 on 4 farms in North-Eastern Italy to compare conventional intensive tillage system "IT" versus conservation agriculture "CA" (no-tillage, cover-crop and residue retention). 96 samples were collected in 2015 at four depths down to 50 cm depth, and investigated for porosity from micro to macro by coupling mercury intrusion porosimetry (MIP) (0.0074-100 µm) and x-ray computed microtomography (µCT) (>26 µm). Pore morphology and architecture were studied from 3D images analysis and MIP pore size curve. Ultramicroporosity class (0.1-5 μm) positively responded to CA after 5-yr of practices adoption while no significant effects were observed in the x-ray µCT domain (> 26 µm). Silty soils of Veneto plain showed a slow reaction to conservation agriculture because of the low soil organic carbon content and poor aggregate stability. Nevertheless the positive influence of CA on ultramicroporosity, which is strictly linked to soil organic carbon (SOC) stabilization, indicated that a virtuous cycle was initiated between SOC and porosity, hopefully leading to well-developed macropore systems and, in turn, enhanced soil functions and ecosystem services.

  13. Changes in Pore Water Quality After Peatland Restoration: Assessment of a Large-Scale, Replicated Before-After-Control-Impact Study in Finland

    Science.gov (United States)

    Menberu, Meseret Walle; Marttila, Hannu; Tahvanainen, Teemu; Kotiaho, Janne S.; Hokkanen, Reijo; Kløve, Bjørn; Ronkanen, Anna-Kaisa

    2017-10-01

    Drainage is known to affect peatland natural hydrology and water quality, but peatland restoration is considered to ameliorate peatland degradation. Using a replicated BACIPS (Before-After-Control-Impact Paired Series) design, we investigated 24 peatlands, all drained for forestry and subsequently restored, and 19 pristine control boreal peatlands with high temporal and spatial resolution data on hydroclimate and pore water quality. In drained conditions, total nitrogen (Ntot), total phosphorus (Ptot), and dissolved organic carbon (DOC) in pore water were several-fold higher than observed at pristine control sites, highlighting the impacts of long-term drainage on pore water quality. In general, pore water DOC and Ntot decreased after restoration measures but still remained significantly higher than at pristine control sites, indicating long time lags in restoration effects. Different peatland classes and trophic levels (vegetation gradient) responded differently to restoration, primarily due to altered hydrology and varying acidity levels. Sites that were hydrologically overrestored (inundated) showed higher Ptot, Ntot, and DOC than well-restored or insufficiently restored sites, indicating the need to optimize natural-like hydrological regimes when restoring peatlands drained for forestry. Rich fens (median pH 6.2-6.6) showed lower pore water Ptot, Ntot, and DOC than intermediate and poor peats (pH 4.0-4.6) both before and after restoration. Nutrients and DOC in pore water increased in the first year postrestoration but decreased thereafter. The most important variables related to pore water quality were trophic level, peatland class, water table level, and soil and air temperature.

  14. Optical properties of chromophoric dissolved organic matter (CDOM) in surface and pore waters adjacent to an oil well in a southern California salt marsh.

    Science.gov (United States)

    Bowen, Jennifer C; Clark, Catherine D; Keller, Jason K; De Bruyn, Warren J

    2017-01-15

    Chromophoric dissolved organic matter (CDOM) optical properties were measured in surface and pore waters as a function of depth and distance from an oil well in a southern California salt marsh. Higher fluorescence and absorbances in pore vs. surface waters suggest soil pore water is a reservoir of CDOM in the marsh. Protein-like fluorophores in pore waters at distinct depths corresponded to variations in sulfate depletion and Fe(II) concentrations from anaerobic microbial activity. These variations were supported by fluorescence indexes and are consistent with differences in optical molecular weight and aromaticity indicators. Fluorescence indices were consistent with autochthonous material of aquatic origin in surface waters, with more terrestrial, humified allochthonous material in deeper pore waters. CDOM optical properties were consistent with significantly enhanced microbial activity in regions closest to the oil well, along with a three-dimensional excitation/emission matrix fluorescence spectrum peak attributable to oil, suggesting anaerobic microbial degradation of oil. Copyright © 2016 Elsevier Ltd. All rights reserved.

  15. Prediction of the soil water retention curve for structured soil from saturation to oven-dryness

    DEFF Research Database (Denmark)

    Karup, Dan; Møldrup, Per; Tuller, Markus

    2017-01-01

    . Independently measured SWRCs for 171 undisturbed soil samples with organic matter contents that ranged from 3 to 14% were used for model validation. The results indicate that consideration of the silt and organic matter fractions, in addition to the clay fraction, improved predictions for the dry-end SWRC......The soil water retention curve (SWRC) is the most fundamental soil hydraulic function required for modelling soil–plant–atmospheric water flow and transport processes. The SWRC is intimately linked to the distribution of the size of pores, the composition of the solid phase and the soil specific...... surface area. Detailed measurement of the SWRC is impractical in many cases because of the excessively long equilibration times inherent to most standard methods, especially for fine textured soil. Consequently, it is more efficient to predict the SWRCbased on easy-to-measure basic soil properties...

  16. Septal Pore Caps in Basidiomycetes, Composition and Ultrastructure

    NARCIS (Netherlands)

    Driel, K.G.A. van

    2007-01-01

    Filamentous fungi, including Ascomycota and Basidiomycota, form mycelia that consist of a network of apical growing hyphae. These hyphae are separated into cellular compartments by septa that have pores of about 70 to 500 nm in diameter. The cytoplasm within the mycelium is thus continuous

  17. Enhanced water transport and salt rejection through hydrophobic zeolite pores

    Science.gov (United States)

    Humplik, Thomas; Lee, Jongho; O'Hern, Sean; Laoui, Tahar; Karnik, Rohit; Wang, Evelyn N.

    2017-12-01

    The potential of improvements to reverse osmosis (RO) desalination by incorporating porous nanostructured materials such as zeolites into the selective layer in the membrane has spurred substantial research efforts over the past decade. However, because of the lack of methods to probe transport across these materials, it is still unclear which pore size or internal surface chemistry is optimal for maximizing permeability and salt rejection. We developed a platform to measure the transport of water and salt across a single layer of zeolite crystals, elucidating the effects of internal wettability on water and salt transport through the ≈5.5 Å pores of MFI zeolites. MFI zeolites with a more hydrophobic (i.e., less attractive) internal surface chemistry facilitated an approximately order of magnitude increase in water permeability compared to more hydrophilic MFI zeolites, while simultaneously fully rejecting both potassium and chlorine ions. However, our results also demonstrated approximately two orders of magnitude lower permeability compared to molecular simulations. This decreased performance suggests that additional transport resistances (such as surface barriers, pore collapse or blockages due to contamination) may be limiting the performance of experimental nanostructured membranes. Nevertheless, the inclusion of hydrophobic sub-nanometer pores into the active layer of RO membranes should improve both the water permeability and salt rejection of future RO membranes (Fasano et al 2016 Nat. Commun. 7 12762).

  18. Pore-scale uncertainty quantification with multilevel Monte Carlo

    KAUST Repository

    Icardi, Matteo

    2014-01-06

    Computational fluid dynamics (CFD) simulations of pore-scale transport processes in porous media have recently gained large popularity. However the geometrical details of the pore structures can be known only in a very low number of samples and the detailed flow computations can be carried out only on a limited number of cases. The explicit introduction of randomness in the geometry and in other setup parameters can be crucial for the optimization of pore-scale investigations for random homogenization. Since there are no generic ways to parametrize the randomness in the porescale structures, Monte Carlo techniques are the most accessible to compute statistics. We propose a multilevel Monte Carlo (MLMC) technique to reduce the computational cost of estimating quantities of interest within a prescribed accuracy constraint. Random samples of pore geometries with a hierarchy of geometrical complexities and grid refinements, are synthetically generated and used to propagate the uncertainties in the flow simulations and compute statistics of macro-scale effective parameters.

  19. The dimension of the pore space in sponges

    International Nuclear Information System (INIS)

    Silva, L H F; Yamashita, M T

    2009-01-01

    A simple experiment to reveal the dimension of the pore space in sponges is proposed. This experiment is suitable for the first year of a physics or engineering course. The calculated dimension of the void space in a sponge of density 16 mg cm -3 was 2.948± 0.008

  20. Microstructural characterization and pore structure analysis of nuclear graphite

    International Nuclear Information System (INIS)

    Kane, J.; Karthik, C.; Butt, D.P.; Windes, W.E.; Ubic, R.

    2011-01-01

    Graphite will be used as a structural and moderator material in next-generation nuclear reactors. While the overall nature of the production of nuclear graphite is well understood, the historic nuclear grades of graphite are no longer available. This paper reports the virgin microstructural characteristics of filler particles and macro-scale porosity in virgin nuclear graphite grades of interest to the Next Generation Nuclear Plant program. Optical microscopy was used to characterize filler particle size and shape as well as the arrangement of shrinkage cracks. Computer aided image analysis was applied to optical images to quantitatively determine the variation of pore structure, area, eccentricity, and orientation within and between grades. The overall porosity ranged between ∼14% and 21%. A few large pores constitute the majority of the overall porosity. The distribution of pore area in all grades was roughly logarithmic in nature. The average pore was best fit by an ellipse with aspect ratio of ∼2. An estimated 0.6-0.9% of observed porosity was attributed to shrinkage cracks in the filler particles. Finally, a preferred orientation of the porosity was observed in all grades.

  1. Energetics of Transport through the Nuclear Pore Complex

    NARCIS (Netherlands)

    Ghavami, Ali; van der Giessen, Erik; Onck, Patrick R

    2016-01-01

    Molecular transport across the nuclear envelope in eukaryotic cells is solely controlled by the nuclear pore complex (NPC). The NPC provides two types of nucleocytoplasmic transport: passive diffusion of small molecules and active chaperon-mediated translocation of large molecules. It has been shown

  2. On the Mechanism of Pore Formation by Melittin

    NARCIS (Netherlands)

    van den Bogaart, Geert; Guzman, Jeanette Velasquez; Mika, Jacek T.; Poolman, Bert

    2008-01-01

    The mechanism of pore formation of lytic peptides, such as melittin from bee venom, is thought to involve binding to the membrane surface, followed by insertion at threshold levels of bound peptide. We show that in membranes composed of zwitterionic lipids, i.e. phosphatidylcholine, melittin not

  3. Plastic strain caused by contraction of pores in polycrystalline graphites

    International Nuclear Information System (INIS)

    Ioka, Ikuo; Yoda, Shinichi; Konishi, Takashi.

    1989-01-01

    The effects of porosity on mechanical properties and deformation behavior of four isotropic polycrystalline graphites were studied. The pore size distributions of the graphites were measured using a conventional mercury penetration technique. The average pore radius of ISO-88 graphite was about one-tenth of that of ISEM-1, IG-11 or IG-15 graphites. Young's modulus of the graphites decreased with increasing porosity. The stress-strain curve of each graphite was measured in its lateral and axial directions. Young's modulus of graphite decreased with increasing load. The plastic strain at a given compressive load was calculated from the stress-strain curve and the initial gradient of the unloading curve at the load. The ratio of lateral plastic strain to axial plastic strain for the graphites was less than 0.5, indicating that the volume of the graphites decreased during compressive loading. By assuming that the volume change was caused by contraction of pores, plastic strain associated with contraction of pores was calculated from the axial plastic strain and lateral plastic strain by slips along the basal planes. The plastic strain increased with increasing axial plastic strain and porosity of graphite. (author)

  4. Pore collapse and regrowth in silicon electrodes for rechargeable batteries

    Energy Technology Data Exchange (ETDEWEB)

    DeCaluwe, S. C. [Department of Mechanical Engineering; Colorado School of Mines; USA; Center for Neutron Research; National Institute of Standards and Technology; Dhar, B. M. [Institute for Materials Research and Dept. of Mechanical Engineering; State University of New York; Binghamton; USA; Material Measurement Laboratory; Huang, L. [Institute for Materials Research and Dept. of Mechanical Engineering; State University of New York; Binghamton; USA; He, Y. [Institute for Materials Research and Dept. of Mechanical Engineering; State University of New York; Binghamton; USA; Department of Physics and Astronomy; Yang, K. [Institute for Materials Research and Dept. of Mechanical Engineering; State University of New York; Binghamton; USA; Owejan, J. P. [Department of Mechanical and Electrical Engineering Technology; State University of New York; Alfred; USA; Zhao, Y. [Department of Physics and Astronomy; University of Georgia; Athens; USA; Talin, A. A. [Center for Nanoscale Science and Technology; National Institute of Standards and Technology; Gaithersburg; USA; Sandia National Laboratories; Dura, J. A. [Center for Neutron Research; National Institute of Standards and Technology; Gaithersburg; USA; Wang, H. [Department of Materials Science and Engineering; University of Maryland; College Park; USA; Institute for Materials Research and Dept. of Mechanical Engineering

    2015-01-01

    In-operando Neutron Reflectometry establishes the pore collapse and regrowth (PCRG) mechanism in amorphous Si. Upon lithiation, porosity is first consumed by expansion of solid Si domains, with little thickness increase. After, the whole film expands. Porosity returns upon delithiation.

  5. Alumina ceramics prepared with new pore-forming agents

    Directory of Open Access Journals (Sweden)

    Zuzana Živcová

    2008-06-01

    Full Text Available Porous ceramics have a wide range of applications at all length scales, ranging from fi ltration membranes and catalyst supports to biomaterials (scaffolds for bone ingrowths and thermally or acoustically insulating bulk materials or coating layers. Organic pore-forming agents (PFAs of biological origin can be used to control porosity, pore size and pore shape. This work concerns the characterization and testing of several less common pore-forming agents (lycopodium, coffee, fl our and semolina, poppy seed, which are of potential interest from the viewpoint of size, shape or availability. The performance of these new PFAs is compared to that of starch, which has become a rather popular PFA for ceramics during the last decade. The PFAs investigated in this work are in the size range from 5 μm (rice starch to approximately 1 mm (poppy seed, all with more or less isometric shape. The burnout behavior of PFAs is studied by thermal analysis, i.e. thermogravimetry and differential thermal analysis. For the preparation of porous alumina ceramics from alumina suspensions containing PFAs traditional slip casting (into plaster molds and starch consolidation casting (using metal molds are used in this work. The resulting microstructures are investigated using optical microscopy, combined with image analysis, as well as other methods (Archimedes method of double-weighing in water, mercury intrusion porosimetry.

  6. Enhanced water transport and salt rejection through hydrophobic zeolite pores.

    Science.gov (United States)

    Humplik, Thomas; Lee, Jongho; O'Hern, Sean; Laoui, Tahar; Karnik, Rohit; Wang, Evelyn N

    2017-12-15

    The potential of improvements to reverse osmosis (RO) desalination by incorporating porous nanostructured materials such as zeolites into the selective layer in the membrane has spurred substantial research efforts over the past decade. However, because of the lack of methods to probe transport across these materials, it is still unclear which pore size or internal surface chemistry is optimal for maximizing permeability and salt rejection. We developed a platform to measure the transport of water and salt across a single layer of zeolite crystals, elucidating the effects of internal wettability on water and salt transport through the ≈5.5 Å pores of MFI zeolites. MFI zeolites with a more hydrophobic (i.e., less attractive) internal surface chemistry facilitated an approximately order of magnitude increase in water permeability compared to more hydrophilic MFI zeolites, while simultaneously fully rejecting both potassium and chlorine ions. However, our results also demonstrated approximately two orders of magnitude lower permeability compared to molecular simulations. This decreased performance suggests that additional transport resistances (such as surface barriers, pore collapse or blockages due to contamination) may be limiting the performance of experimental nanostructured membranes. Nevertheless, the inclusion of hydrophobic sub-nanometer pores into the active layer of RO membranes should improve both the water permeability and salt rejection of future RO membranes (Fasano et al 2016 Nat. Commun. 7 12762).

  7. Concentration Polarization to Measure Nano-pore Accessibility

    NARCIS (Netherlands)

    Solsona, Miguel; Eijkel, Jan C.T.; Olthuis, Wouter; Papadimitriou, Vasileios; van den Berg, Albert; Abelmann, Leon; Weckhuysen, Bert M.; Nieuwelink, A. E.

    2017-01-01

    Understanding the deactivation process in porous catalysts is of tremendous economic significance. We demonstrate the feasibility of using the concentration polarization method to obtain the pore accessibility distribution at single particle level for the first time. By using this technique we could

  8. Predicting saturated hydraulic conductivity using soil morphological properties

    Directory of Open Access Journals (Sweden)

    Gülay Karahan

    2016-01-01

    Full Text Available Many studies have been conducted to predict soil saturated hydraulic conductivity (Ks by parametric soil properties such as bulk density and particle-size distribution. Although soil morphological properties have a strong effect on Ks, studies predicting Ks by soil morphological properties such as type, size, and strength of soil structure; type, orientation and quantity of soil pores and roots and consistency are rare. This study aimed at evaluating soil morphological properties to predict Ks. Undisturbed soil samples (15 cm length and 8.0 cm id. were collected from topsoil (0-15 cm and subsoil (15-30 cm (120 samples with a tractor operated soil sampler at sixty randomly selected sampling sites on a paddy field and an adjecent grassland in Central Anatolia (Cankırı, Turkey. Synchronized disturbed soil samples were taken from the same sampling sites and sampling depths for basic soil analyses. Saturated hydraulic conductivity was measured on the soil columns using a constant-head permeameter. Following the Ks measurements, the upper part of soil columns were covered to prevent evaporation and colums were left to drain in the laboratory. When the water flow through the column was stopped, a subsample were taken for bulk density and then soil columns were disturbed for describing the soil morphological properties. In addition, soil texture, bulk density, pH, field capacity, wilting point, cation exchange capacity, specific surface area, aggregate stability, organic matter, and calcium carbonate were measured on the synchronized disturbed soil samples. The data were divided into training (80 data values and validation (40 data values sets. Measured values of Ks ranged from 0.0036 to 2.14 cmh-1 with a mean of 0.86 cmh-1. The Ks was predicted from the soil morphological and parametric properties by stepwise multiple linear regression analysis. Soil structure class, stickiness, pore-size, root-size, and pore-quantity contributed to the Ks prediction

  9. Mesoporous templated silicas: stability, pore size engineering and catalytic activation

    International Nuclear Information System (INIS)

    Vansant, Etienne

    2003-01-01

    The Laboratory of Adsorption and Catalysis has focused its research activities on the synthesis and activation of new porous materials. In the past few years, we have succeeded in developing easy and reproducible pathways to synthesize a huge variety of mesoporous crystalline materials. Points of interest in the synthesis of Mesoporous Templated Silicas are (i) stabilization of the structure, to withstand hydrothermal, thermal and mechanical pressure, (ii) pore size engineering to systematically control the pore size, pore volume and the ratio micro/mesopores and (iii) ease and reproducibility of the synthesis procedure, applying green principles, such as template recuperation. By carefully adapting the synthesis conditions and composition of the synthesis gel, using surfactants (long chain quaternary ammonium ions) and co-templates (long chain amines, alcohols or alkanes), the pore size of the obtained materials can be controlled from 1.5 to 7.0 nm, retaining the very narrow pore size distribution. Alternatively, materials with combined micro- and mesoporosity can be synthesized, using neutral surfactants (triblock copolymers). Hereby, the optimization of the SBA-15 and SBA-16 synthesis is being done in order to create mesoporous materials with microporous walls. The second research line is the controlled activation of MTS materials, by grafting or incorporation of catalytic active centers. We have developed for this purpose the Molecular Designed Dispersion method, which uses metal diketonate complexes as precursors. It is shown that in all cases the dispersion of the metal oxides on the surface is much better compared to the conventional grafting techniques. We have studied and published activation with V, Ti, Mo, Fe, Al and Cr species on different MTS materials. The structure and location of the active metal ion is the subject of an extensive spectroscopic investigation, using FT-IR, FT-Raman, UV-Vis DR coupled with selective chemisorption experiments and

  10. Formation and decay of rudimentary penumbra around a pore

    Energy Technology Data Exchange (ETDEWEB)

    Watanabe, Hiroko [Unit of Synergetic Studies for Space, Kyoto University, Yamashina-ku, Kyoto 607-8417 (Japan); Kitai, Reizaburo [Kwasan and Hida Observatories, Kyoto University, Yamashina-ku, Kyoto 607-8417 (Japan); Otsuji, Kenichi, E-mail: watanabe@kwasan.kyoto-u.ac.jp [Solar Observatory, National Astronomical Observatory, Mitaka, Tokyo 181-8588 (Japan)

    2014-12-01

    We analyze the evolution of a pore in the active region NOAA 10940 using the data obtained by the Hinode satellite on 2007 February 3. The pore we analyzed showed the formation of a rudimentary penumbra structure, succeeded by an abrupt disappearance after about 5 hr. The pore had an approximate radius of 3.5 Mm and a total magnetic flux of 3.0 × 10{sup 19} Mx, which is a little smaller than the necessary magnetic flux for penumbral formation supposed by Rucklidge et al. (1-1.5 × 10{sup 20} Mx). Our observation describes a rare phenomenon which was in the unstable phase between a pore and a sunspot. The area of the dark umbra gradually decreased when the rudimentary penumbral filaments formed the penumbral structure, meaning that the penumbra develops at the expense of the umbral magnetic flux. This statement was confirmed by a rough estimation of the magnetic flux variation observed by the Hinode Fe I magnetogram. Five hours after the formation phase, the decay phase began. In this decaying phase, multiple opposite polarity patches are found to appear in the exterior of the pore (a different location from the penumbra formation site). We interpret these opposite polarities as signatures of the horizontal magnetic field, which preferably appears in the course of the unstable reconfiguration of the magnetic field structure. During the course of the disappearance of the penumbra, the horizontal penumbral field seems to become vertical because of the dark umbral area that recovered by about 10%.

  11. Predicting Reactive Transport Dynamics in Carbonates using Initial Pore Structure

    Science.gov (United States)

    Menke, H. P.; Nunes, J. P. P.; Blunt, M. J.

    2017-12-01

    Understanding rock-fluid interaction at the pore-scale is imperative for accurate predictive modelling of carbon storage permanence. However, coupled reactive transport models are computationally expensive, requiring either a sacrifice of resolution or high performance computing to solve relatively simple geometries. Many recent studies indicate that initial pore structure many be the dominant mechanism in determining the dissolution regime. Here we investigate how well the initial pore structure is predictive of distribution and amount of dissolution during reactive flow using particle tracking on the initial image. Two samples of carbonate rock with varying initial pore space heterogeneity were reacted with reservoir condition CO2-saturated brine and scanned dynamically during reactive flow at a 4-μm resolution between 4 and 40 times using 4D X-ray micro-tomography over the course of 1.5 hours using μ-CT. Flow was modelled on the initial binarized image using a Navier-Stokes solver. Particle tracking was then run on the velocity fields, the streamlines were traced, and the streamline density was calculated both on a voxel-by-voxel and a channel-by-channel basis. The density of streamlines was then compared to the amount of dissolution in subsequent time steps during reaction. It was found that for the flow and transport regimes studied, the streamline density distribution in the initial image accurately predicted the dominant pathways of dissolution and gave good indicators of the type of dissolution regime that would later develop. This work suggests that the eventual reaction-induced changes in pore structure are deterministic rather than stochastic and can be predicted with high resolution imaging of unreacted rock.

  12. GEOPHYSICAL PROPERTIES OF SOILS

    KAUST Repository

    Santamarina, Carlos

    2016-12-01

    Low energy perturbations used in geophysical methods provide insightful information about constant-fabric soil properties and their spatial variability. There are causal links between soil type, index properties, elastic wave velocity, electromagnetic wave parameters and thermal properties. Soil type relates to the stress-dependent S-wave velocity, thermal and electrical conductivity and permittivity. The small strain stiffness reflects the state of stress, the extent of diagenetic cementation and/or freezing. Pore fluid chemistry, fluid phase and changes in either fluid chemistry or phase manifest through electromagnetic measurements. The volumetric water content measured with electromagnetic techniques is the best predictor of porosity if the water saturation is 100%. Changes in water saturation alter the P-wave velocity when Srà100%, the S-wave velocity at intermediate saturations, and the thermal conductivity when the saturation is low Srà0%. Finally, tabulated values suffice to estimate heat capacity and latent heat for engineering design, however thermal conductivity requires measurements under proper field conditions.

  13. Preferential flow through intact soil cores: Effects of matrix head

    Energy Technology Data Exchange (ETDEWEB)

    Langner, H.W.; Gaber, H.M.; Wraith, J.M.; Huwe, B.; Inskeep, W.P.

    1999-12-01

    Continuous soil pores may act as pathways for preferential flow depending on their size and water status (filled or drained), the latter being largely controlled by the soil matrix head (h). The literature contains a wide range of proposed minimal pore sizes that may contribute to preferential flow. The objective of this study was to examine the relationship between h (and corresponding pore sizes) and preferential solute transport in a naturally structured soil. Tracer ({sup 3}H{sub 2}O and pentafluorobenzoic acid, [PFBA]) miscible displacement experiments were performed at several h values in intact soil cores (15-cm diameter, 30-cm length) using an apparatus especially suited to maintain constant h while collecting large effluent volumes. To test for the occurrence of preferential flow, observed breakthrough curves (BTCs) were evaluated for physical nonequilibrium (PNE) using a comparison between fitted local equilibrium (PNE) and PNE models. Fitting results of the observed BTCs indicated absence of PNE in all solute transport experiments at h {le} {minus}10 cm. Experiments at h {ge} {minus}5 cm consistently exhibited PNE conditions, indicating the presence of preferential flow. These results suggest that soil pores with effective radii of 150 {micro}m and smaller (water-filled at h = {minus}10 cm) do not contribute to preferential flow. Observed pore water velocities were not indicative of the presence or absence of preferential flow conditions. Continuous measurements of soil water content ({theta}) using time domain reflectometry (TDR) revealed that at h = {minus}10 cm, <2% of the soil volume had drained.

  14. Effects of sodium hypochlorite and high pH buffer solution in electrokinetic soil treatment on soil chromium removal and the functional diversity of soil microbial community

    International Nuclear Information System (INIS)

    Cang Long; Zhou Dongmei; Alshawabkeh, Akram N.; Chen Haifeng

    2007-01-01

    Effects of sodium hypochlorite (NaClO), applied as an oxidant in catholyte, and high pH buffer solution on soil Cr removal and the functional diversity of soil microbial community during enhanced electrokinetic treatments of a chromium (Cr) contaminated red soil are evaluated. Using pH control system to maintain high alkalinity of soil together with the use of NaClO increased the electrical conductivities of soil pore liquid and electroosmotic flux compared with the control (Exp-01). The pH control and NaClO improved the removal of Cr(VI) and total Cr from the soil. The highest removal percentages of soil Cr(VI) and total Cr were 96 and 72%, respectively, in Exp-04 when the pH value of the anolyte was controlled at 10 and NaClO was added in the catholyte. The alkaline soil environment and introduction of NaClO in the soil enhanced the desorption of Cr(VI) from the soil and promoted Cr(III) oxidation to mobile Cr(VI), respectively. However, the elevated pH and introduction of NaClO in the soil, which are necessary for improving the removal efficiency of soil Cr, resulted in a significantly adverse impact on the functional diversity of soil microbial community. It suggests that to assess the negative impact of extreme conditions for enhancing the extraction efficiencies of Cr on the soil properties and function is necessary

  15. Influence of pore fluid and frequency on elastic properties of greensand as interpreted using NMR data

    DEFF Research Database (Denmark)

    Hossain, Zakir; Mukerj, Tapan; Fabricius, Ida Lykke

    2011-01-01

    dispersion. However, Biot’s theory does not fully explain the frequency dispersion of sedimentary rocks. Greensands are composed of a mixture of quartz and micro-porous glauconite grains. In greensand, it is possible that the contrast between flow in macro-pores and micro-pores within glauconites gives rise....... Biot’s critical frequency and NMR (nuclear magnetic resonance) T2 spectrum were combined to describe the differences in fluid flow within macro-pores and within micro-pores. NMR data show that Biot’s flow should occur only in large pores in the greensand while, Biot’s flow should not occur in micro-pores....... Differences of fluid flow in macro-pores and micro-pores pores are described as high frequency squirt flow in greensand....

  16. Understanding capillary condensation and hysteresis in porous silicon: network effects within independent pores.

    Science.gov (United States)

    Naumov, Sergej; Khokhlov, Alexey; Valiullin, Rustem; Kärger, Jörg; Monson, Peter A

    2008-12-01

    The ability to exert a significant degree of pore structure control in porous silicon materials has made them attractive materials for the experimental investigation of the relationship between pore structure, capillary condensation, and hysteresis phenomena. Using both experimental measurements and a lattice gas model in mean field theory, we have investigated the role of pore size inhomogeneities and surface roughness on capillary condensation of N2 at 77K in porous silicon with linear pores. Our results resolve some puzzling features of earlier experimental work. We find that this material has more in common with disordered materials such as Vycor glass than the idealized smooth-walled cylindrical pores discussed in the classical adsorption literature. We provide strong evidence that this behavior comes from the complexity of the processes within independent linear pores, arising from the pore size inhomogeneities along the pore axis, rather than from cooperative effects between different pores.

  17. An instrument to measure differential pore pressures in deep ocean sediments: Pop-Up-Pore-Pressure-Instrument (PUPPI)

    International Nuclear Information System (INIS)

    Schultheiss, P.J.; McPhail, S.D.; Packwood, A.R.; Hart, B.

    1985-01-01

    A Pop-Up-Pore-Pressure-Instrument (PUPPI) has been developed to measure differential pore pressures in sediments. The differential pressure is the pressure above or below normal hydrostatic pressure at the depth of the measurement. It is designed to operate in water depths up to 6000 metres for periods of weeks or months, if required, and measures differential pore pressures at depths of up to 3 metres into the sediments with a resolution of 0.05 kPa. It is a free-fall device with a lance which penetrates the sediments. This lance and the ballast weight is disposed when the PUPPI is acoustically released from the sea floor. When combined with permeability and porosity values of deep-sea sediments the pore pressure measurements made using the PUPPI suggest advection velocities as low as 8.8 mm/yr. The mechanical, electrical and acoustic systems are described together with data obtained from both shallow and deep water trials. (author)

  18. Soil pollution and soil protection

    OpenAIRE

    Haan, de, F.A.M.; Visser-Reijneveld, M.I.

    1996-01-01

    This book was compiled from lecture handouts prepared for the international postgraduate course on soil quality, entitled 'Soil Pollution and Soil Protection' given jointly by the universities of Wageningen (The Netherlands), Gent and Leuven (Belgium), under the auspices of the international Training Centre (PHLO) of Wageningen Agricultural University.Of the three environmental compartments air, water and soil, it is soil that varies most in composition under natural conditions. The effects o...

  19. A review of the impacts of degradation threats on soil properties in the UK.

    Science.gov (United States)

    Gregory, A S; Ritz, K; McGrath, S P; Quinton, J N; Goulding, K W T; Jones, R J A; Harris, J A; Bol, R; Wallace, P; Pilgrim, E S; Whitmore, A P

    2015-10-01

    National governments are becoming increasingly aware of the importance of their soil resources and are shaping strategies accordingly. Implicit in any such strategy is that degradation threats and their potential effect on important soil properties and functions are defined and understood. In this paper, we aimed to review the principal degradation threats on important soil properties in the UK, seeking quantitative data where possible. Soil erosion results in the removal of important topsoil and, with it, nutrients, C and porosity. A decline in soil organic matter principally affects soil biological and microbiological properties, but also impacts on soil physical properties because of the link with soil structure. Soil contamination affects soil chemical properties, affecting nutrient availability and degrading microbial properties, whilst soil compaction degrades the soil pore network. Soil sealing removes the link between the soil and most of the 'spheres', significantly affecting hydrological and microbial functions, and soils on re-developed brownfield sites are typically degraded in most soil properties. Having synthesized the literature on the impact on soil properties, we discuss potential subsequent impacts on the important soil functions, including food and fibre production, storage of water and C, support for biodiversity, and protection of cultural and archaeological heritage. Looking forward, we suggest a twin approach of field-based monitoring supported by controlled laboratory experimentation to improve our mechanistic understanding of soils. This would enable us to better predict future impacts of degradation processes, including climate change, on soil properties and functions so that we may manage soil resources sustainably.

  20. Hydrologic inferences from strontium isotopes in pore water from the unsaturated zone at Yucca Mountain, Nevada

    International Nuclear Information System (INIS)

    Marshall, B.D.; Futa, K.; Peterman, Z.E.

    1997-01-01

    Calcite is ubiquitous at Yucca Mountain, occurring in the soils and as fracture and cavity coatings within the volcanic tuff section. Strontium is a trace element in calcite, generally at the tens to hundreds of ppm level. Because calcite contains very little rubidium and the half-life of the 87 Rb parent is billions of years, the 87 Sr/ 86 Sr ratios of the calcite record the ratio in the water from which the calcite precipitated. Dissolution and reprecipitation does not alter these compositions so that, in the absence of other sources of strontium, one would expect the strontium ratios along a flow path to preserve variations inherited from strontium in the soil zone. Strontium isotope compositions of calcites from various settings in the Yucca Mountain region have contributed to the understanding of the unsaturated zone (UZ), especially in distinguishing unsaturated zone calcite from saturated zone calcite. Different populations of calcite have been compared, either to group them together or distinguish them from each other in terms of their strontium isotope compositions. Ground water and perched water have also been analyzed; this paper presents strontium isotope data obtained on pore water

  1. Response of the soil physical properties to restoration techniques in limestone quarries

    Science.gov (United States)

    Luna Ramos, Lourdes; Miralles Mellado, Isabel; Vignozzi, Nadia; Solé-Benet, Albert

    2016-04-01

    The devastating effects of soil erosion in mining areas from arid/semiarid environments have prompted efforts geared toward an improvement of the soil physical conditions for a fast establishment of vegetal cover. Restoration practices that increase soil moisture content are essential in drylands where rainfall is irregular or insufficient in order to accelerate ecological restoration. The aim of this study was to analyse the influence of organic amendments and mulches on the soil porosity as well as their impact on infiltration, five years after the beginning of an experimental restoration from limestone quarries in Sierra de Gádor (Almería, SE Spain). Nine plots 15 x 5 m were prepared at the site in a completely randomized 2 x 3 factorial design. The first factor, organic amendment, had three levels: sewage sludge (SA), compost from domestic organic residues (CA) and no amendment (NA). The second factor, mulches, also had three levels: gravel (GM), woodchip (WM) and no mulch (NM). In each experimental plot 75 native plants (Macrochloa tenacissima, Anthyllis terniflora and Anthyllis cytisoides) were planted. Infiltration was determined from rainfall simulations and soil porosity was assessed by image analysis of soil thin sections. Total porosity and pores distribution were measured according to pore shape (regular, irregular and elongated) and size (transmission pores [50-500 μm] and fissures [>500 μm]). Natural undisturbed soils around the mine area were used as a reference soil (RS). Restoration treatments showed higher total porosity, fissures and elongated pores than RS and we observed the highest values in treatments with WM. This fact is due to the disruption caused by the application of treatments rather that a good soil structure. Each combination exhibited different values of transmission pores, being greater in the combinations of NA-GM, SA-NM and CA-WM. Infiltration increased with the increase of the total porosity, fissures and elongated pores

  2. Deformational mass transport and invasive processes in soil evolution

    Science.gov (United States)

    Brimhall, George H.; Chadwick, Oliver A.; Lewis, Chris J.; Compston, William; Williams, Ian S.; Danti, Kathy J.; Dietrich, William E.; Power, Mary E.; Hendricks, David; Bratt, James

    1992-01-01

    Channels left in soil by decayed roots and burrowing animals allow organic and inorganic precipitates and detritus to move through soil from above, to depths at which the minuteness of pores restricts further passage. Consecutive translocation-and-root-growth phases stir the soil, constituting an invasive, dilatational process which generates cumulative strains. Below the depths thus affected, mineral dissolution by descending organic acids leads to internal collapse; this softened/condensed precursor horizon is then transformed into soil via biological activity that mixes and expands the evolving residuum through root and micropore-network invasion.

  3. Cover stones on liquefiable soil bed under waves

    DEFF Research Database (Denmark)

    Sumer, B. Mutlu; Hatipoglu, Figen; Fredsøe, Jørgen

    2010-01-01

    The paper describes the results of an experimental study on the behavior of cover stones on a liquefiable soil bed exposed to a progressive wave. The soil was silt with d50=0.098mm. Stones, the size of 4cm, were used as cover material. The effect of packing density of stones, and that of number...... of stone layers (including the effect of an intermediate filter layer) were investigated. Pore pressure was measured across the soil depth. The experiments show that the soil liquefaction depended mainly on two parameters: the packing density of stones, and the number of stone layers. When the liquefaction...

  4. Monte-Carlo simulation of crystallographical pore growth in III-V-semiconductors

    International Nuclear Information System (INIS)

    Leisner, Malte; Carstensen, Juergen; Foell, Helmut

    2011-01-01

    The growth of crystallographical pores in III-V-semiconductors can be understood in the framework of a simple model, which is based on the assumption that the branching of pores is proportional to the current density at the pore tips. The stochastic nature of this model allows its implementation into a three-dimensional Monte-Carlo-simulation of pore growth. The simulation is able to reproduce the experimentally observed crysto pore structures in III-V-semiconductors in full quantitative detail. The different branching probabilities for different semiconductors, as well as doping levels, can be deduced from the specific passivation behavior of the semiconductor-electrolyte-interface at the pore tips.

  5. Pore connectivity effects on solute transport in rocks

    International Nuclear Information System (INIS)

    Hu, Qinhong; Ewing, Robert P.

    2001-01-01

    Retardation of nuclear contaminants in rock matrices can lead to long retention times, allowing substantial radionuclide decay prior to eventual release. Imbibition and diffusion into the rock matrix can move contaminants away from an active fracture, thereby contributing to their retardation. However, diffusive transport in some rocks may behave anomalously because of their sparsely connected porespace, in contrast to diffusion in rocks with denser pore connections. We examined imbibition of weakly sorbing tracers into welded tuff and Indiana sandstone, and water imbibition into metagraywacke and Berea sandstone. Tuff samples were initially equilibrated to 12% and 76% water (v/v) within controlled humidity chambers, while the other rocks were air-dried. For imbibition, one face was exposed to water, with or without tracer, and uptake was measured over time. Following imbibition, tracer concentration measurements were made at fine (1 mm) increments. Three anomalous results were observed: (1) Indiana sandstone and metagraywacke showed mass of imbibed water scaling as time 0.26 , while tuff and Berea sandstone showed the more classical scaling with time 0.5 ; (2) tracer movement into dry (2% initial saturation) Indiana sandstone showed a dispersion pattern similar to that expected during tracer movement into moist (76% initial saturation) tuff; and (3) tracer concentrations at the inlet face of the tuff sample were approximately twice those deeper inside the sample. The experiment was then modeled using random walk methods on a 3-D lattice with different values of pore coordination. Network model simulations that used a pore coordination of 1.49 for Indiana sandstone and 1.56 for metagraywacke showed similar temporal scaling, a result of their porespace being close to the percolation threshold. Tracer concentration profiles in Indiana sandstone and tuff were closely matched by simulations that used pore coordinations of 1.49 and 1.68, respectively, because of how low

  6. Pore Connectivity Effects on Solute Transport in Rocks

    International Nuclear Information System (INIS)

    Oinhong Hu

    2001-01-01

    Retardation of nuclear contaminants in rock matrices can lead to long retention times, allowing substantial radionuclide decay prior to eventual release. Imbibition and diffusion into the rock matrix can move contaminants away from an active fracture, thereby contributing to their retardation. However, diffusive transport in some rocks may behave anomalously because of their sparsely connected porespace, in contrast to diffusion in rocks with denser pore connections. We examined imbibition of weakly sorbing tracers into welded tuff and Indiana sandstone, and water imbibition into metagraywacke and Berea sandstone. Tuff samples were initially equilibrated to 12% and 76% water (v/v) within controlled humidity chambers, while the other rocks were air-dried. For imbibition, one face was exposed to water, with or without tracer, and uptake was measured over time. Following imbibition, tracer concentration measurements were made at fine (1 mm) increments. Three anomalous results were observed: (1) Indiana sandstone and metagraywacke showed mass of imbibed water scaling as time 0.26 , while tuff and Berea sandstone showed the more classical scaling with time 0.05 ; (2) tracer movement into dry (2% initial saturation) Indiana sandstone showed a dispersion pattern similar to that expected during tracer movement into moist (76% initial saturation) tuft and (3) tracer concentrations at the inlet face of the tuff sample were approximately twice those deeper inside the sample. The experiment was then modeled using random walk methods on a 3-D lattice with different values of pore coordination. Network model simulations that used a pore coordination of 1.49 for Indiana sandstone and 1.56 for metagraywacke showed similar temporal scaling, a result of their porespace being close to the percolation threshold. Tracer concentration profiles in Indiana sandstone and tuff were closely matched by simulations that used pore coordinations of 1.49 and 1.68, respectively, because of how low

  7. Regulation of Exocytotic Fusion Pores by SNARE Protein Transmembrane Domains

    Directory of Open Access Journals (Sweden)

    Zhenyong Wu

    2017-10-01

    Full Text Available Calcium-triggered exocytotic release of neurotransmitters and hormones from neurons and neuroendocrine cells underlies neuronal communication, motor activity and endocrine functions. The core of the neuronal exocytotic machinery is composed of soluble N-ethyl maleimide sensitive factor attachment protein receptors (SNAREs. Formation of complexes between vesicle-attached v- and plasma-membrane anchored t-SNAREs in a highly regulated fashion brings the membranes into close apposition. Small, soluble proteins called Complexins (Cpx and calcium-sensing Synaptotagmins cooperate to block fusion at low resting calcium concentrations, but trigger release upon calcium increase. A growing body of evidence suggests that the transmembrane domains (TMDs of SNARE proteins play important roles in regulating the processes of fusion and release, but the mechanisms involved are only starting to be uncovered. Here we review recent evidence that SNARE TMDs exert influence by regulating the dynamics of the fusion pore, the initial aqueous connection between the vesicular lumen and the extracellular space. Even after the fusion pore is established, hormone release by neuroendocrine cells is tightly controlled, and the same may be true of neurotransmitter release by neurons. The dynamics of the fusion pore can regulate the kinetics of cargo release and the net amount released, and can determine the mode of vesicle recycling. Manipulations of SNARE TMDs were found to affect fusion pore properties profoundly, both during exocytosis and in biochemical reconstitutions. To explain these effects, TMD flexibility, and interactions among TMDs or between TMDs and lipids have been invoked. Exocytosis has provided the best setting in which to unravel the underlying mechanisms, being unique among membrane fusion reactions in that single fusion pores can be probed using high-resolution methods. An important role will likely be played by methods that can probe single fusion pores

  8. Observations of wave-induced pore pressure gradients and bed level response on a surf zone sandbar

    Science.gov (United States)

    Anderson, Dylan; Cox, Dan; Mieras, Ryan; Puleo, Jack A.; Hsu, Tian-Jian

    2017-06-01

    Horizontal and vertical pressure gradients may be important physical mechanisms contributing to onshore sediment transport beneath steep, near-breaking waves in the surf zone. A barred beach was constructed in a large-scale laboratory wave flume with a fixed profile containing a mobile sediment layer on the crest of the sandbar. Horizontal and vertical pore pressure gradients were obtained by finite differences of measurements from an array of pressure transducers buried within the upper several centimeters of the bed. Colocated observations of erosion depth were made during asymmetric wave trials with wave heights between 0.10 and 0.98 m, consistently resulting in onshore sheet flow sediment transport. The pore pressure gradient vector within the bed exhibited temporal rotations during each wave cycle, directed predominantly upward under the trough and then rapidly rotating onshore and downward as the wavefront passed. The magnitude of the pore pressure gradient during each phase of rotation was correlated with local wave steepness and relative depth. Momentary bed failures as deep as 20 grain diameters were coincident with sharp increases in the onshore-directed pore pressure gradients, but occurred at horizontal pressure gradients less than theoretical critical values for initiation of the motion for compact beds. An expression combining the effects of both horizontal and vertical pore pressure gradients with bed shear stress and soil stability is used to determine that failure of the bed is initiated at nonnegligible values of both forces.type="synopsis">type="main">Plain Language SummaryThe pressure gradient present within the seabed beneath breaking waves may be an important physical mechanism transporting sediment. A large-scale laboratory was used to replicate realistic surfzone conditions in controlled tests, allowing for horizontal and vertical pressure gradient magnitudes and the resulting sediment bed response to be observed with precise instruments

  9. Electrical Resistivity Correlation to Vadose Zone Sediment and Pore-Water Composition for the BC Cribs and Trenches Area

    International Nuclear Information System (INIS)

    Serne, R. Jeffrey; Ward, Anderson L.; Um, Wooyong; Bjornstad, Bruce N.; Rucker, Dale F.; Lanigan, David C.; Benecke, Mark W.

    2009-01-01

    This technical report documents the results of geochemical and soil resistivity characterization of sediment obtained from four boreholes drilled in the BC Cribs and Trench area. Vadose zone sediment samples were obtained at a frequency of about every 2.5 ft from approximately 5 ft bgs to borehole total depth. In total, 505 grab samples and 39 six-inch long cores were obtained for characterization. The pore-water chemical composition data, laboratory-scale soil resistivity and other ancillary physical and hydrologic measurements and analyses described in this report are designed to provide a crucial link between direct measurements on sediments and the surface-based electrical-resistivity information obtained via field surveys. A second goal of the sediment characterization was to measure the total and water-leachable concentrations of key contaminants of concern as a function of depth and distance from the footprints of inactive disposal facilities. The total and water-leachable concentrations of key contaminants will be used to update contaminant distribution conceptual models and to provide more data for improving base-line risk predictions and remedial alternative selections. The ERC 'ground truthing' exercise for the individual boreholes showed mixed results. In general, the high concentrations of dissolved salts in the pore waters of sediments from C5923, C5924 and C4191 produced a low resistivity 'target' in the processed resistivity field surveys, and variability could be seen in the resistivity data that could relate to the variability in pore- water concentrations but the correlations (regression R2 were mediocre ranging from 0.2 to 0.7 at best; where perfect correlation is 1.0). The field-based geophysical data also seemed to suffer from a sort of vertigo, where looking down from the ground surface, the target (e.g., maximum pore-water salt concentration) depth was difficult to resolve. The best correlations between the field electrical resistivity

  10. Electrical Resistivity Correlation to Vadose Zone Sediment and Pore-Water Composition for the BC Cribs and Trenches Area

    Energy Technology Data Exchange (ETDEWEB)

    Serne, R. Jeffrey; Ward, Anderson L.; Um, Wooyong; Bjornstad, Bruce N.; Rucker, Dale F.; Lanigan, David C.; Benecke, Mark W.

    2009-06-01

    This technical report documents the results of geochemical and soil resistivity characterization of sediment obtained from four boreholes drilled in the BC Cribs and Trench area. Vadose zone sediment samples were obtained at a frequency of about every 2.5 ft from approximately 5 ft bgs to borehole total depth. In total, 505 grab samples and 39 six-inch long cores were obtained for characterization. The pore-water chemical composition data, laboratory-scale soil resistivity and other ancillary physical and hydrologic measurements and analyses described in this report are designed to provide a crucial link between direct measurements on sediments and the surface-based electrical-resistivity information obtained via field surveys. A second goal of the sediment characterization was to measure the total and water-leachable concentrations of key contaminants of concern as a function of depth and distance from the footprints of inactive disposal facilities. The total and water-leachable concentrations of key contaminants will be used to update contaminant distribution conceptual models and to provide more data for improving base-line risk predictions and remedial alternative selections. The ERC “ground truthing” exercise for the individual boreholes showed mixed results. In general, the high concentrations of dissolved salts in the pore waters of sediments from C5923, C5924 and C4191 produced a low resistivity “target” in the processed resistivity field surveys, and variability could be seen in the resistivity data that could relate to the variability in pore- water concentrations but the correlations (regression R2 were mediocre ranging from 0.2 to 0.7 at best; where perfect correlation is 1.0). The field-based geophysical data also seemed to suffer from a sort of vertigo, where looking down from the ground surface, the target (e.g., maximum pore-water salt concentration) depth was difficult to resolve. The best correlations between the field electrical

  11. Visualising the equilibrium distribution and mobility of organic contaminants in soil using the chemical partitioning space.

    Science.gov (United States)

    Wong, Fiona; Wania, Frank

    2011-06-01

    Assessing the behaviour of organic chemicals in soil is a complex task as it is governed by the physical chemical properties of the chemicals, the characteristics of the soil as well as the ambient conditions of the environment. The chemical partitioning space, defined by the air-water partition coefficient (K(AW)) and the soil organic carbon-water partition coefficient (K(OC)), was employed to visualize the equilibrium distribution of organic contaminants between the air-filled pores, the pore water and the solid phases of the bulk soil and the relative importance of the three transport processes removing contaminants from soil (evaporation, leaching and particle erosion). The partitioning properties of twenty neutral organic chemicals (i.e. herbicides, pharmaceuticals, polychlorinated biphenyls and volatile chemicals) were estimated using poly-parameter linear free energy relationships and superimposed onto these maps. This allows instantaneous estimation of the equilibrium phase distribution and mobility of neutral organic chemicals in soil. Although there is a link between the major phase and the dominant transport process, such that chemicals found in air-filled pore space are subject to evaporation, those in water-filled pore space undergo leaching and those in the sorbed phase are associated with particle erosion, the partitioning coefficient thresholds for distribution and mobility can often deviate by many orders of magnitude. In particular, even a small fraction of chemical in pore water or pore air allows for evaporation and leaching to dominate over solid phase transport. Multiple maps that represent soils that differ in the amount and type of soil organic matter, water saturation, temperature, depth of surface soil horizon, and mineral matters were evaluated.

  12. Assessment of Soil Liquefaction Potential Based on Numerical Method

    DEFF Research Database (Denmark)

    Choobasti, A. Janalizadeh; Vahdatirad, Mohammad Javad; Torabi, M.

    2012-01-01

    Paying special attention to geotechnical hazards such as liquefaction in huge civil projects like urban railways especially in susceptible regions to liquefaction is of great importance. A number of approaches to evaluate the potential for initiation of liquefaction, such as Seed and Idriss...... simplified method have been developed over the years. Although simplified methods are available in calculating the liquefaction potential of a soil deposit and shear stresses induced at any point in the ground due to earthquake loading, these methods cannot be applied to all earthquakes with the same...... accuracy, also they lack the potential to predict the pore pressure developed in the soil. Therefore, it is necessary to carry out a ground response analysis to obtain pore pressures and shear stresses in the soil due to earthquake loading. Using soil historical, geological and compositional criteria...

  13. Thermal separation of soil particles from thermal conductivity measurement under various air pressures.

    Science.gov (United States)

    Lu, Sen; Ren, Tusheng; Lu, Yili; Meng, Ping; Zhang, Jinsong

    2017-01-05

    The thermal conductivity of dry soils is related closely to air pressure and the contact areas between solid particles. In this study, the thermal conductivity of two-phase soil systems was determined under reduced and increased air pressures. The thermal separation of soil particles, i.e., the characteristic dimension of the pore space (d), was then estimated based on the relationship between soil thermal conductivity and air pressure. Results showed that under both reduced and increased air pressures, d estimations were significantly larger than the geometrical mean separation of solid particles (D), which suggested that conductive heat transfer through solid particles dominated heat transfer in dry soils. The increased air pressure approach gave d values lower than that of the reduced air pressure method. With increasing air pressure, more collisions between gas molecules and solid surface occurred in micro-pores and intra-aggregate pores due to the reduction of mean free path of air molecules. Compared to the reduced air pressure approach, the increased air pressure approach expressed more micro-pore structure attributes in heat transfer. We concluded that measuring thermal conductivity under increased air pressure procedures gave better-quality d values, and improved soil micro-pore structure estimation.

  14. Nanometer-Scale Pore Characteristics of Lacustrine Shale, Songliao Basin, NE China.

    Directory of Open Access Journals (Sweden)

    Min Wang

    Full Text Available In shale, liquid hydrocarbons are accumulated mainly in nanometer-scale pores or fractures, so the pore types and PSDs (pore size distributions play a major role in the shale oil occurrence (free or absorbed state, amount of oil, and flow features. The pore types and PSDs of marine shale have been well studied; however, research on lacustrine shale is rare, especially for shale in the oil generation window, although lacustrine shale is deposited widely around the world. To investigate the relationship between nanometer-scale pores and oil occurrence in the lacustrine shale, 10 lacustrine shale core samples from Songliao Basin, NE China were analyzed. Analyses of these samples included geochemical measurements, SEM (scanning electron microscope observations, low pressure CO2 and N2 adsorption, and high-pressure mercury injection experiments. Analysis results indicate that: (1 Pore types in the lacustrine shale include inter-matrix pores, intergranular pores, organic matter pores, and dissolution pores, and these pores are dominated by mesopores and micropores; (2 There is no apparent correlation between pore volumes and clay content, however, a weak negative correlation is present between total pore volume and carbonate content; (3 Pores in lacustrine shale are well developed when the organic matter maturity (Ro is >1.0% and the pore volume is positively correlated with the TOC (total organic carbon content. The statistical results suggest that oil in lacustrine shale mainly occurs in pores with diameters larger than 40 nm. However, more research is needed to determine whether this minimum pore diameter for oil occurrence in lacustrine shale is widely applicable.

  15. Design of pore size of macroporous ceramic substrates

    International Nuclear Information System (INIS)

    Szewald, O.; Kotsis, I.

    2000-01-01

    A method has been developed for the design of macro-porous ceramic substrates. Based on geometrical and regression models detailed technology was worked out for producing these 100% open porous filters, which were made using quasi homo-disperse fractions of corundum of diameters of several tens and hundreds microns and glassy binding material. Axial pressing was used as a forming process. Pore networks with size distribution that can be defined by a curve having one maximum were provided applying the above technology. Based on geometrical considerations and measurements it was proved that these maximums are at characteristic pore sizes that depend only on characteristic size of the original grain fractions and on the extent of the axial forming pressure. Copyright (2000) AD-TECH - International Foundation for the Advancement of Technology Ltd

  16. Roles of biology, chemistry, and physics in soil macroaggregate formation and stabilization

    Science.gov (United States)

    Soil functions or ecosystem services depend on the distribution of macro- (= 0.25 mm) and micro- (< 0.25 mm) aggregates and open space between aggregates. It is the arrangement of the aggregates and pore space which allows air and water movement in and out of soil; reduces compaction; and stimulates...

  17. How historical copper contamination affects soil structure and mobilization and transport of colloids

    DEFF Research Database (Denmark)

    Paradelo, Marcos; Møldrup, Per; Holmstrup, Martin

    between 0.01 to 0.43 pore volumes, with longer times for the most contaminated point, likely related with its higher soil density and lower air permeability. The copper pollution affected colloid and tracer transport in the soil columns. The release of colloids especially in the most contaminated points...

  18. A framework to measure the availability of engineered nanoparticles in soils

    NARCIS (Netherlands)

    Rodrigues, S.M.; Trindade, T.; Duarte, A.C.; Pereira, E.; Koopmans, G.F.; Römkens, P.F.A.M.

    2016-01-01

    In this study, the reactions of engineered nanoparticles (ENPs) in soils, with respect to their nanospecific properties, and observed effects of key soil properties (e.g. pH, ionic strength and natural colloids) on their stability in pore water are discussed. Key processes include aggregation and

  19. Solarization soil

    International Nuclear Information System (INIS)

    Abou Ghraibe, W.

    1995-01-01

    Solar energy could be used in pest control, in soil sterilization technology. The technique consists of covering humid soils by plastic films steadily fixed to the soil. Timing must be in summer during 4-8 weeks, where soil temperature increases to degrees high enough to control pests or to produce biological and chemical changes. The technique could be applied on many pests soil, mainly fungi, bacteria, nematods, weeds and pest insects. The technique could be used in greenhouses as well as in plastic film covers or in orchards where plastic films present double benefits: soil sterilization and production of black mulch. Mechanism of soil solarization is explained. Results show that soil solarization can be used in pest control after fruit crops cultivation and could be a method for an integrated pest control. 9 refs

  20. Pore Pressure Distribution and Flank Instability in Hydrothermally Altered Stratovolcanoes

    Science.gov (United States)

    Ball, J. L.; Taron, J.; Hurwitz, S.; Reid, M. E.

    2015-12-01

    Field and geophysical investigations of stratovolcanoes with long-lived hydrothermal systems commonly reveal that initially permeable regions (such as brecciated layers of pyroclastic material) can become both altered and water-bearing. Hydrothermal alteration in these regions, including clay formation, can turn them into low-permeability barriers to fluid flow, which could increase pore fluid pressures resulting in flank slope instability. We examined elevated pore pressure conditions using numerical models of hydrothermal flow in stratovolcanoes, informed by geophysical data about internal structures and deposits. Idealized radially symmetric meshes were developed based on cross-sectional profiles and alteration/permeability structures of Cascade Range stratovolcanoes. We used the OpenGeoSys model to simulate variably saturated conditions in volcanoes heated only by regional heat fluxes, as well as 650°C intrusions at two km depth below the surface. Meteoric recharge was estimated from precipitation rates in the Cascade Range. Preliminary results indicate zones of elevated pore pressures form: 1) where slopes are underlain by continuous low-permeability altered layers, or 2) when the edifice has an altered core with saturated, less permeable limbs. The first scenario might control shallow collapses on the slopes above the altered layers. The second could promote deeper flank collapses that are initially limited to the summit and upper slopes, but could progress to the core of an edifice. In both scenarios, pore pressures can be further elevated by shallow intrusions, or evolve over longer time scales under forcing from regional heat flux. Geometries without confining low-permeability layers do not show these pressure effects. Our initial scenarios use radially symmetric models, but we are also simulating hydrothermal flow under real 3D geometries with asymmetric subsurface structures (Mount Adams). Simulation results will be used to inform 3D slope

  1. Gas release from pressurized closed pores in nuclear fuels

    International Nuclear Information System (INIS)

    Bailey, P.; Donnelly, S.E.; Armour, D.G.; Matzke, H.

    1988-01-01

    Gas release from the nuclear fuels UO 2 and UN out of pressurized closed pores produced by autoclave anneals has been studied by Thermal Desorption Spectrometry (TDS). Investigation of gas release during heating and cooling has indicated stress related mechanical effects leading to gas release. This release occurred in a narrow temperature range between about 1000 and 1500 K for UO 2 , but it continued down to ambient temperature for UN. No burst release was observed above 1500 K for UO 2 . (orig.)

  2. Understanding the mechanisms behind coking pressure: Relationship to pore structure

    Energy Technology Data Exchange (ETDEWEB)

    John J. Duffy; M. Castro Diaz; Colin E. Snape; Karen M. Steel; Merrick R. Mahoney [University of Nottingham, Nottingham (United Kingdom). Nottingham Fuel and Energy Centre, School of Chemical, Environmental and Mining Engineering

    2007-09-15

    Three low volatile coals A, B and C with oven wall pressures of 100 kPa, 60 kPa and 20 kPa respectively were investigated using high-temperature rheometry, {sup 1}H NMR, thermogravimetric analysis and SEM, with the primary aim to better understand the mechanisms behind the coking pressure phenomenon. Rheometer plate displacement measurements ({Delta}L) have shown differences in the expansion and contraction behaviour of the three coals, which seem to correlate with changes in rheological properties; while SEM images have shown that the expansion process coincides with development of pore structure. It is considered that the point of maximum plate height ({Delta}L{sub max}) prior to contraction may be indicative of a cell opening or pore network forming process, based on analogies with other foam systems. Such a process may be considered important for coking pressure since it provides a potential mechanism for volatile escape, relieving internal gas pressure and inducing charge contraction. For coal C, which has the highest fluidity {delta}L{sub max} occurs quite early in the softening process and consequently a large degree of contraction is observed; while for the lower fluidity coal B, the process is delayed since pore development and consequently wall thinning progress at a slower rate. When {Delta}L{sub max} is attained, a lower degree of contraction is observed because the event occurs closer to resolidification where the increasing viscosity/elasticity can stabilise the expanded pore structure. For coal A which is relatively high fluidity, but also high coking pressure, a greater degree of swelling is observed prior to cell rupture, which may be due to greater fluid elasticity during the expansion process. This excessive expansion is considered to be a potential reason for its high coking pressure. 58 refs., 15 figs., 1 tab.

  3. Membranes with functionalized carbon nanotube pores for selective transport

    Science.gov (United States)

    Bakajin, Olgica; Noy, Aleksandr; Fornasiero, Francesco; Park, Hyung Gyu; Holt, Jason K; Kim, Sangil

    2015-01-27

    Provided herein composition and methods for nanoporous membranes comprising single walled, double walled, or multi-walled carbon nanotubes embedded in a matrix material. Average pore size of the carbon nanotube can be 6 nm or less. These membranes are a robust platform for the study of confined molecular transport, with applications in liquid and gas separations and chemical sensing including desalination, dialysis, and fabric formation.

  4. Pore Space Connectivity and the Transport Properties of Rocks

    Directory of Open Access Journals (Sweden)

    Bernabé Yves

    2016-07-01

    Full Text Available Pore connectivity is likely one of the most important factors affecting the permeability of reservoir rocks. Furthermore, connectivity effects are not restricted to materials approaching a percolation transition but can continuously and gradually occur in rocks undergoing geological processes such as mechanical and chemical diagenesis. In this study, we compiled sets of published measurements of porosity, permeability and formation factor, performed in samples of unconsolidated granular aggregates, in which connectivity does not change, and in two other materials, sintered glass beads and Fontainebleau sandstone, in which connectivity does change. We compared these data to the predictions of a Kozeny-Carman model of permeability, which does not account for variations in connectivity, and to those of Bernabé et al. (2010, 2011 model, which does [Bernabé Y., Li M., Maineult A. (2010 Permeability and pore connectivity: a new model based on network simulations, J. Geophys. Res. 115, B10203; Bernabé Y., Zamora M., Li M., Maineult A., Tang Y.B. (2011 Pore connectivity, permeability and electrical formation factor: a new model and comparison to experimental data, J. Geophys. Res. 116, B11204]. Both models agreed equally well with experimental data obtained in unconsolidated granular media. But, in the other materials, especially in the low porosity samples that had undergone the greatest amount of sintering or diagenesis, only Bernabé et al. model matched the experimental data satisfactorily. In comparison, predictions of the Kozeny-Carman model differed by orders of magnitude. The advantage of the Bernabé et al. model was its ability to account for a continuous, gradual reduction in pore connectivity during sintering or diagenesis. Although we can only speculate at this juncture about the mechanisms responsible for the connectivity reduction, we propose two possible mechanisms, likely to be active at different stages of sintering and diagenesis

  5. Optimization of transdermal delivery using magainin pore-forming peptide

    OpenAIRE

    Kim, Yeu-Chun; Ludovice, Peter J.; Prausnitz, Mark R.

    2008-01-01

    The skin's outer layer of stratum corneum, which is a thin tissue containing multilamellar lipid bilayers, is the main barrier to drug delivery to the skin. To increase skin permeability, our previous work has shown large enhancement of transdermal permeation using a pore-forming peptide, magainin, which was formulated with N-lauroyl sarcosine (NLS) in 50% ethanol-in-PBS. Mechanistic analysis suggested that magainin and NLS can increase skin permeability by disrupting stratum corneum lipid st...

  6. Radial symmetry in a chimeric glutamate receptor pore

    Science.gov (United States)

    Wilding, Timothy J.; Lopez, Melany N.; Huettner, James E.

    2014-02-01

    Ionotropic glutamate receptors comprise two conformationally different A/C and B/D subunit pairs. Closed channels exhibit fourfold radial symmetry in the transmembrane domain (TMD) but transition to twofold dimer-of-dimers symmetry for extracellular ligand binding and N-terminal domains. Here, to evaluate symmetry in open pores we analysed interaction between the Q/R editing site near the pore loop apex and the transmembrane M3 helix of kainate receptor subunit GluK2. Chimeric subunits that combined the GluK2 TMD with extracellular segments from NMDA receptors, which are obligate heteromers, yielded channels made up of A/C and B/D subunit pairs with distinct substitutions along M3 and/or Q/R site editing status, in an otherwise identical homotetrameric TMD. Our results indicate that Q/R site interaction with M3 occurs within individual subunits and is essentially the same for both A/C and B/D subunit conformations, suggesting that fourfold pore symmetry persists in the open state.

  7. Silicon pore optics for the international x-ray observatory

    Science.gov (United States)

    Wille, E.; Wallace, K.; Bavdaz, M.; Collon, M. J.; Günther, R.; Ackermann, M.; Beijersbergen, M. W.; Riekerink, M. O.; Blom, M.; Lansdorp, B.; de Vreede, L.

    2017-11-01

    Lightweight X-ray Wolter optics with a high angular resolution will enable the next generation of X-ray telescopes in space. The International X-ray Observatory (IXO) requires a mirror assembly of 3 m2 effective area (at 1.5 keV) and an angular resolution of 5 arcsec. These specifications can only be achieved with a novel technology like Silicon Pore Optics, which is developed by ESA together with a consortium of European industry. Silicon Pore Optics are made of commercial Si wafers using process technology adapted from the semiconductor industry. We present the manufacturing process ranging from single mirror plates towards complete focusing mirror modules mounted in flight configuration. The performance of the mirror modules is tested using X-ray pencil beams or full X-ray illumination. In 2009, an angular resolution of 9 arcsec was achieved, demonstrating the improvement of the technology compared to 17 arcsec in 2007. Further development activities of Silicon Pore Optics concentrate on ruggedizing the mounting system and performing environmental tests, integrating baffles into the mirror modules and assessing the mass production.

  8. Toxicity of sediments and pore water from Brunswick Estuary, Georgia

    Science.gov (United States)

    Winger, Parley V.; Lasier, Peter J.; Geitner, Harvey

    1993-01-01

    A chlor-alkali plant in Brunswick, Georgia, USA, discharged >2 kg mercury/d into a tributary of the Turtle River-Brunswick Estuary from 1966 to 1971. Mercury concentrations in sediments collected in 1989 along the tributary near the chlor-alkali plant ranged from 1 to 27 μg/g (dry weight), with the highest concentrations found in surface (0–8 cm) sediments of subtidal zones in the vicinity of the discharge site. Toxicity screening in 1990 using Microtox® bioassays on pore water extracted on site from sediments collected at six stations distributed along the tributary indicated that pore water was highly toxic near the plant discharge. Ten-day toxicity tests on pore water from subsequent sediment samples collected near the plant discharge confirmed high toxicity to Hyalella azteca, and feeding activity was significantly reduced in whole-sediment tests. In addition to mercury in the sediments, other metals (chromium, lead, and zinc) exceeded 50 μg/g, and polychlorobiphenyl (PCB) concentrations ranged from 67 to 95 μg/g. On a molar basis, acid-volatile sulfide concentrations (20–45 μmol/g) in the sediments exceeded the metal concentrations. Because acid-volatile sulfides bind with cationic metals and form metal sulfides, which are generally not bioavailable, toxicities shown by these sediments were attributed to the high concentrations of PCBs and possibly methylmercury.

  9. Chemical modelling of pore water composition from PFBC residues

    International Nuclear Information System (INIS)

    Karlsson, L.G.

    1991-01-01

    The concentration of trace elements varies depending on the source of the coal and also due to the combustion process used. Mercury is one important element among the trace elements in the coal residues, generally recognised as potentially harmful to the biological system. To predict the pore water concentrations of mercury and other important constituents leached from coal combustion residues disposal sites, mechanistic data on chemical reactions are required. The present study is an application of a basially thermodynamical approach using the geochemical code EQ3NR. The presence of discrete solid phases that control the aqueous concentrations of major elements such as aluminium, calcium and silicon are identified. Solid phases are modelled in equilibrium with a hypothetical pore water at a pH range of 7-11. In this study the thermodynamic database of EQ3NR has been complemented with data for cadmium, mercury and lead taken from the OECD/NEA Thermodynamic Database and from a compilation made by Lindsay. Possible solubility limiting phases for the important trace elements arsenic, cadmium, chromium, copper, mercury, nickel and lead have been identified. Concentrations of these trace elements as a function of pH in the hypothetical pore water were calculated using mechanistic thermodynamial data. The thermodynamical approach in this study seems justified because most solid residues that are either present or expected to form during weathering have relatively fast precipitation/dissolution kinetics. (21 refs., 18 figs., 5 tabs.)

  10. Effects of pore design on mechanical properties of nanoporous silicon

    International Nuclear Information System (INIS)

    Winter, Nicholas; Becton, Matthew; Zhang, Liuyang; Wang, Xianqiao

    2017-01-01

    Nanoporous silicon has been emerging as a powerful building block for next-generation sensors, catalysts, transistors, and tissue scaffolds. The capability to design novel devices with desired mechanical properties is paramount to their reliability and serviceability. In order to bring further resolution to the highly variable mechanical characteristics of nanoporous silicon, here we perform molecular dynamics simulations to study the effects of ligament thickness, relative density, and pore geometry/orientation on the mechanical properties of nanoporous silicon, thereby determining its Young's modulus, ultimate strength, and toughness as well as the scaling laws versus the features of interior ligaments. Results show that pore shape and pattern dictate stress accumulation inside the designed structure, leading to the corresponding failure signature, such as stretching-dominated, bending-dominated, or stochastic failure signatures, in nanoporous silicon. The nanostructure of the material is also seen to drive or mute size effects such as “smaller is stronger” and “smaller is ductile”. This investigation provides useful insight into the behavior of nanoporous silicon and how one might leverage its promising applications. - Graphical abstract: Molecular dynamics simulations are performed to study the effects of ligament thickness, relative density, and pore geometry/orientation on the mechanical properties of nanoporous silicon, thereby determining its Young's modulus, ultimate strength, and toughness as well as the scaling trends versus the features of interior ligaments.

  11. Influence factors on etching rate of PET nuclear pore membrane

    International Nuclear Information System (INIS)

    Zuo Zhenzhong; Wu Zhendong; Liang Haiying; Ju Wei; Chen Dongfeng; Fu Yuanyong; Qu Guopu

    2014-01-01

    Background: The nuclear pore membrane is a kind of liquid filtration material manufactured by irradiation and chemical etching. Various conditions in etch process have a great influence on etch rate. Purpose: The influence factors of concentration and temperature of etch solution and the irradiation energy of heavy ions on etch rate was studied. Methods: Four layers of PET (polyethylene terephthalate) films were stacked together and were irradiated with 140-MeV 32 S ions at room temperature under vacuum conditions. Utilizing conductivity measurement technique, the electrical current changes through the u:radiated PET film were monitored during etching, from which the breakthrough time and therefore the track etching rate was calculated. Results: The results show that there is an exponential correlation between etch rate and temperature, and a linear correlation between etch rate and concentration. The track etching rate increases linearly with energy loss rate. Empirical formula for the bulk etching rate as a function of etchant concentration and temperature was also established via fitting of measurements. Conclusion: It is concluded that by using 1.6-MeV·u -1 32 S ions, PET nuclear pore membrane with cylindrical pore shape can be prepared at 85℃ with etchant concentration of l mol·L -1 . (authors)

  12. Cationic PAMAM dendrimers as pore-blocking binary toxin inhibitors.

    Science.gov (United States)

    Förstner, Philip; Bayer, Fabienne; Kalu, Nnanya; Felsen, Susanne; Förtsch, Christina; Aloufi, Abrar; Ng, David Y W; Weil, Tanja; Nestorovich, Ekaterina M; Barth, Holger

    2014-07-14

    Dendrimers are unique highly branched macromolecules with numerous groundbreaking biomedical applications under development. Here we identified poly(amido amine) (PAMAM) dendrimers as novel blockers for the pore-forming B components of the binary anthrax toxin (PA63) and Clostridium botulinum C2 toxin (C2IIa). These pores are essential for delivery of the enzymatic A components of the internalized toxins from endosomes into the cytosol of target cells. We demonstrate that at low μM concentrations cationic PAMAM dendrimers block PA63 and C2IIa to inhibit channel-mediated transport of the A components, thereby protecting HeLa and Vero cells from intoxication. By channel reconstitution and high-resolution current recording, we show that the PAMAM dendrimers obstruct transmembrane PA63 and C2IIa pores in planar lipid bilayers at nM concentrations. These findings suggest a new potential role for the PAMAM dendrimers as effective polyvalent channel-blocking inhibitors, which can protect human target cells from intoxication with binary toxins from pathogenic bacteria.

  13. Pore Topology Effects in Positron Annihilation Spectroscopy of Zeolites.

    Science.gov (United States)

    Zubiaga, Asier; Warringham, Robbie; Mitchell, Sharon; Gerchow, Lars; Cooke, David; Crivelli, Paolo; Pérez-Ramírez, Javier

    2017-03-03

    Positron annihilation spectroscopy (PAS) is a powerful method to study the size and connectivity of pores in zeolites. The lifetime of positronium within the host material is commonly described by the Tao-Eldrup model. However, one of its largest limitations arises from the simple geometries considered for the shape of the pores, which cannot describe accurately the complex topologies in zeolites. Here, an atomic model that combines the Tao potential with the crystallographic structure is introduced to calculate the distribution and lifetime of Ps intrinsic to a given framework. A parametrization of the model is undertaken for a set of widely applied zeolite framework types (*BEA, FAU, FER, MFI, MOR, UTL), before extending the model to all known structures. The results are compared to structural and topological descriptors, and to the Tao-Eldrup model adapted for zeolites, demonstrating the intricate dependence of the lifetime on the pore architecture. © 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

  14. Dawestrema cycloancistrium (Monogenea) from the head pores of arapaimas.

    Science.gov (United States)

    Portes Santos, Cláudia; da Silva, Maralina Torres; Moravec, Franti Ek

    2017-07-24

    Arapaima gigas is one of the main cultured fish species in South America, and monogenean parasites of this species cause large economic losses to fish farmers. During surveys of the parasites of cultured arapaimas from Mexiana Island in the Amazon River Delta, Rio Branco, in northwestern Brazilian Amazonia, and Yurimaguas, Peru, the monogenean Dawestrema cycloancistrium was found in the gills of A. gigas as well as in previously unreported sites, i.e. the head pores and chambers. The aim of this study was to investigate the transmission route of this parasite and its geographical distribution as well as to describe its morphology as observed by light and confocal imaging. Phalloidin labeling confirmed the presence of 2 prostatic reservoirs and showed muscular branches of fibers supporting haptoral sclerites. In arapaimas, the head connects to the gill chambers via 2 perforated scales located at the dorsolateral sides of the distal part of the head. The scales connect to thin channels and chambers situated in the proximal part of the head. These chambers are filled with cephalic mucus, which flows out to the environment through terminal pores. Adults and egg masses of monogeneans were found on the gills and inside the head pores and cavities of fish along with cephalic mucus. This indicates a specialized method of parasite transmission from adult fish to fingerlings during parental care (holding offspring in the mouth) or via head secretions, providing evidence of a new adapted mechanism of dispersion.

  15. In situ temperature tunable pores of shape memory polyurethane membranes

    International Nuclear Information System (INIS)

    Ahn, Joon-Sung; Yu, Woong-Ryeol; Youk, Ji Ho; Ryu, Hee Youk

    2011-01-01

    Conventional shape memory polymers, such as shape memory polyurethanes (SMPU), can exhibit net two-way shape memory behavior (2WSM), i.e., upon heating and subsequent cooling, their macroscopic shapes change reversibly under an applied bias load. This paper is aimed at reporting similar 2WSM behavior, especially by focusing on the size of nanopores/micropores in SMPU membranes, i.e., the size of the pores can be reversibly changed by up to about 300 nm upon repeated heating and cooling. The SMPU membranes were prepared by electrospinning and elongated at temperatures higher than the transition temperature of the SMPU. Under the constant stress, the size change of the pores in the membranes was measured by applying cyclic temperature change. It was observed that the pore size changed from 150 to 440 nm according to the temperature change, demonstrating that the SMPU membrane can be utilized as a smart membrane to selectively separate substances according to their sizes by just controlling temperature

  16. Integration of pore features into the evaluation of fingerprint evidence.

    Science.gov (United States)

    Anthonioz, Alexandre; Champod, Christophe

    2014-01-01

    Fingerprint practitioners rely on level 3 features to make decisions in relation to the source of an unknown friction ridge skin impression. This research proposes to assess the strength of evidence associated with pores when shown in (dis)agreement between a mark and a reference print. Based upon an algorithm designed to automatically detect pores, a metric is defined in order to compare different impressions. From this metric, the weight of the findings is quantified using a likelihood ratio. The results obtained on four configurations and 54 donors show the significant contribution of the pore features and translate into statistical terms what latent fingerprint examiners have developed holistically through experience. The system provides LRs that are indicative of the true state under both the prosecution and the defense propositions. Not only such a system brings transparency regarding the weight to assign to such features, but also forces a discussion in relation to the risks of such a model to mislead. © 2013 American Academy of Forensic Sciences.

  17. Influence of rainfall intensity on infiltration and deformation of unsaturated soil slopes

    International Nuclear Information System (INIS)

    Garcia Aristizabal, Edwin Fabian; Riveros Jerez, Carlos Alberto; Builes Brand, Manuel Alonso

    2011-01-01

    In order to improve the understanding of the influence of rainfall intensity on infiltration and deformation behavior of unsaturated soil slopes, numerical 2D analyses are carried out by a three-phase elasto-viscoplastic seepage-deformation coupled method. From the numerical results, it is shown that regardless of the saturated permeability of the soil slope, the increase in the pore water pressure (reduction in suction) during rainfall infiltration is localized close to the slope surface. In addition, the generation of the pore water pressure and the lateral displacement are mainly controlled by the ratio of the rainfall intensity to the saturated permeability of the soil.

  18. Evaluation of Optimal Pore Size of (3-Aminopropyltriethoxysilane Grafted MCM-41 for Improved CO2 Adsorption

    Directory of Open Access Journals (Sweden)

    Zhilin Liu

    2015-01-01

    Full Text Available An array of new MCM-41 with substantially larger average pore diameters was synthesized through adding 1,3,5-trimethylbenzene (TMB as the swelling agent to explore the effect of pore size on final adsorbent properties. The pore expanded MCM-41 was also grafted with (3-Aminopropyltriethoxysilane (APTES to determine the optimal pore size for CO2 adsorption. The pore-expanded mesoporous MCM-41s showed relatively less structural regularity but significant increments of pore diameter (4.64 to 7.50 nm; the fraction of mesopore volume also illustrated an increase. The adsorption heat values were correlated with the order of the adsorption capacities for pore expanded MCM-41s. After amine functionalization, the adsorption capacities and heat values showed a significant increase. APTES-grafted pore-expanded MCM-41s depicted a high potential for CO2 capture regardless of the major drawback of the high energy required for regeneration.

  19. Difficulties of supercurrents in narrow pores of 3He-A

    International Nuclear Information System (INIS)

    Thuneberg, E.V.; Kurkijaervi, J.

    1980-01-01

    We consider resistanceless supercurrents through narrow pores and find such currents to vanish in most cases because of end effects at the entries and exists of the pores. Under pressure dc-supercurrents are found to arise. (author)

  20. Capillary pressure at irregularly shaped pore throats: Implications for water retention characteristics

    Science.gov (United States)

    Suh, Hyoung Suk; Kang, Dong Hun; Jang, Jaewon; Kim, Kwang Yeom; Yun, Tae Sup

    2017-12-01

    The random shapes of pore throats in geomaterials hinder accurate estimation of capillary pressure, and conventional pore network models that simply use the Young-Laplace equation assuming circular pore throats overestimate the capillary pressure. As a solution to this problem that does not complicate the pore network model or slow its implementation, we propose a new morphological analysis method to correlate the capillary pressure at an irregular pore channel with its cross-sectional geometry using lattice Boltzmann (LB) simulation and Mayer and Stowe-Princen theory. Geometry-based shape factors for pore throats are shown here to correlate strongly with the capillary pressure obtained by LB simulation. Water retention curves obtained by incorporating the morphological calibration into conventional pore network simulation and their correlative scheme agree well with experimental data. The suggested method is relevant to pore-scale processes such as geological CO2 sequestration, methane bubbling from wetlands, and enhanced carbon recovery.

  1. Unsaturated hydraulic properties of Sphagnum moss and peat reveal trimodal pore-size distributions

    Science.gov (United States)

    Weber, Tobias K. D.; Iden, Sascha C.; Durner, Wolfgang

    2017-01-01

    In ombrotrophic peatlands, the moisture content of the vadose zone (acrotelm) controls oxygen diffusion rates, redox state, and the turnover of organic matter. Whether peatlands act as sinks or sources of atmospheric carbon thus relies on variably saturated flow processes. The Richards equation is the standard model for water flow in soils, but it is not clear whether it can be applied to simulate water flow in live Sphagnum moss. Transient laboratory evaporation experiments were conducted to observe evaporative water fluxes in the acrotelm, containing living Sphagnum moss, and a deeper layer containing decomposed moss peat. The experimental data were evaluated by inverse modeling using the Richards equation as process model for variably-saturated flow. It was tested whether water fluxes and time series of measured pressure heads during evaporation could be simulated. The results showed that the measurements could be matched very well providing the hydraulic properties are represented by a suitable model. For this, a trimodal parametrization of the underlying pore-size distribution was necessary which reflects three distinct pore systems of the Sphagnum constituted by inter-, intra-, and inner-plant water. While the traditional van Genuchten-Mualem model led to great discrepancies, the physically more comprehensive Peters-Durner-Iden model which accounts for capillary and noncapillary flow, led to a more consistent description of the observations. We conclude that the Richards equation is a valid process description for variably saturated moisture fluxes over a wide pressure range in peatlands supporting the conceptualization of the live moss as part of the vadose zone.

  2. Impact of monovalent cations on soil structure. Part I. Results of an Iranian soil

    Science.gov (United States)

    Farahani, Elham; Emami, Hojat; Keller, Thomas; Fotovat, Amir; Khorassani, Reza

    2018-01-01

    This study investigated the impact of monovalent cations on clay dispersion, aggregate stability, soil pore size distribution, and saturated hydraulic conductivity on agricultural soil in Iran. The soil was incubated with treatment solutions containing different concentrations (0-54.4 mmol l-1) of potassium and sodium cations. The treatment solutions included two levels of electrical conductivity (EC=3 or 6 dS m-1) and six K:Na ratios per electrical conductivity level. At both electrical conductivity levels, spontaneously dispersible clay increased with increasing K concentration, and with increasing K:Na ratio. A negative linear relationship between percentage of water-stable aggregates and spontaneously dispersible clay was observed. Clay dispersion generally reduced the mean pore size, presumably due to clogging of pores, resulting in increased water retention. At both electrical conductivity levels, hydraulic conductivity increased with increasing exchangeable potassium percentage at low exchangeable potassium percentage values, but decreased with further increases in exchangeable potassium percentage at higher exchangeable potassium percentage. This is in agreement with earlier studies, but seems in conflict with our data showing increasing spontaneously dispersible clay with increasing exchangeable potassium percentage. Our findings show that clay dispersion increased with increasing K concentration and increasing K:Na ratio, demonstrating that K can have negative impacts on soil structure.

  3. Prediction of the Soil Water Characteristic from Soil Particle Volume Fractions

    DEFF Research Database (Denmark)

    Naveed, Muhammad; Møldrup, Per; Tuller, Markus

    2012-01-01

    Modelling water distribution and flow in partially saturated soils requires knowledge of the soil-water characteristic (SWC). However, measurement of the SWC is challenging and time-consuming, and in some cases not feasible. This study introduces two predictive models (Xw-model and Xw......*-model) for the SWC, derived from readily available soil properties such as texture and bulk density. A total of 46 soils from different horizons at 15 locations across Denmark were used for models evaluation. The Xw-model predicts the volumetric water content as a function of volumetric fines content (organic matter...... (organic matter, clay, silt, fine and coarse sand), variably included in the model depending on the pF value. The volumetric content of a particular soil particle size fraction was included in the model if it was assumed to contribute to the pore size fraction still occupied with water at the given p...

  4. A theoretical extension of the soil freezing curve paradigm

    Science.gov (United States)

    Amiri, Erfan A.; Craig, James R.; Kurylyk, Barret L.

    2018-01-01

    Numerical models of permafrost evolution in porous media typically rely upon a smooth continuous relation between pore ice saturation and sub-freezing temperature, rather than the abrupt phase change that occurs in pure media. Soil scientists have known for decades that this function, known as the soil freezing curve (SFC), is related to the soil water characteristic curve (SWCC) for unfrozen soils due to the analogous capillary and sorptive effects experienced during both soil freezing and drying. Herein we demonstrate that other factors beyond the SFC-SWCC relationship can influence the potential range over which pore water phase change occurs. In particular, we provide a theoretical extension for the functional form of the SFC based upon the presence of spatial heterogeneity in both soil thermal conductivity and the freezing point depression of water. We infer the functional form of the SFC from many abrupt-interface 1-D numerical simulations of heterogeneous systems with prescribed statistical distributions of water and soil properties. The proposed SFC paradigm extension has the appealing features that it (1) is determinable from measurable soil and water properties, (2) collapses into an abrupt phase transition for homogeneous media, (3) describes a wide range of heterogeneity within a single functional expression, and (4) replicates the observed hysteretic behavior of freeze-thaw cycles in soils.

  5. Pore water colloid properties in argillaceous sedimentary rocks

    Energy Technology Data Exchange (ETDEWEB)

    Degueldre, Claude, E-mail: c.degueldre@lancaster.ac.uk [Engineering Department, University of Lancaster, LA1 4YW Lancaster (United Kingdom); ChiAM & Institute of Environment, University of Geneva, 1211 Genève 4, Swizerland (Switzerland); Earlier, NES, Paul Scherrer Institute, 5232 Villigen (Switzerland); Cloet, Veerle [NAGRA, Hardstrasse 73, 5430 Wettingen (Switzerland)

    2016-11-01

    The focus of this work is to evaluate the colloid nature, concentration and size distribution in the pore water of Opalinus Clay and other sedimentary host rocks identified for a potential radioactive waste repository in Switzerland. Because colloids could not be measured in representative undisturbed porewater of these host rocks, predictive modelling based on data from field and laboratory studies is applied. This approach allowed estimating the nature, concentration and size distributions of the colloids in the pore water of these host rocks. As a result of field campaigns, groundwater colloid concentrations are investigated on the basis of their size distribution quantified experimentally using single particle counting techniques. The colloid properties are estimated considering data gained from analogue hydrogeochemical systems ranging from mylonite features in crystalline fissures to sedimentary formations. The colloid concentrations were analysed as a function of the alkaline and alkaline earth element concentrations. Laboratory batch results on clay colloid generation from compacted pellets in quasi-stagnant water are also reported. Experiments with colloids in batch containers indicate that the size distribution of a colloidal suspension evolves toward a common particle size distribution independently of initial conditions. The final suspension size distribution was found to be a function of the attachment factor of the colloids. Finally, calculations were performed using a novel colloid distribution model based on colloid generation, aggregation and sedimentation rates to predict under in-situ conditions what makes colloid concentrations and size distributions batch- or fracture-size dependent. The data presented so far are compared with the field and laboratory data. The colloid occurrence, stability and mobility have been evaluated for the water of the considered potential host rocks. In the pore water of the considered sedimentary host rocks, the clay

  6. Soils - Volusia County Soils (Polygons)

    Data.gov (United States)

    NSGIC Local Govt | GIS Inventory — Soils: 1:24000 SSURGO Map. Polygon boundaries of Soils in Volusia County, downloaded from SJRWMD and created by NRCS and SJRWMD. This data set is a digital version...

  7. Soil microbiology and soil health assessment

    Science.gov (United States)

    Soil scientists have long recognized the importance of soil biology in ecological health. In particular, soil microbes are crucial for many soil functions including decomposition, nutrient cycling, synthesis of plant growth regulators, and degradation of synthetic chemicals. Currently, soil biologis...

  8. Soil metagenomics and tropical soil productivity

    OpenAIRE

    Garrett, Karen A.

    2009-01-01

    This presentation summarizes research in the soil metagenomics cross cutting research activity. Soil metagenomics studies soil microbial communities as contributors to soil health.C CCRA-4 (Soil Metagenomics)

  9. Pore characteristics of shale gas reservoirs from the Lower Paleozoic in the southern Sichuan Basin, China

    Directory of Open Access Journals (Sweden)

    Xianqing Li

    2016-06-01

    Full Text Available Data was acquired from both the drillings and core samples of the Lower Paleozoic Qiongzhusi and Longmaxi Formations' marine shale gas reservoirs in the southern Sichuan Basin by means of numerous specific experimental methods such as organic geochemistry, organic petrology, and pore analyses. Findings helped determine the characteristics of organic matter, total porosity, microscopic pore, and pore structure. The results show that the Lower Paleozoic marine shale in the south of the Sichuan Basin are characterized by high total organic carbon content (most TOC>2.0%, high thermal maturity level (RO = 2.3%–3.8%, and low total porosity (1.16%–6.87%. The total organic carbon content and thermal maturity level of the Qiongzhusi Formation shale are higher than those of the Longmaxi Formation shale, while the total porosity of the Qiongzhusi Formation shale is lower than that of the Longmaxi Formation shale. There exists intergranular pore, dissolved pore, crystal particle pore, particle edge pore, and organic matter pore in the Lower Paleozoic Qiongzhusi Formation and Longmaxi Formation shale. There are more micro-nano pores developed in the Longmaxi Formation shales than those in the Qiongzhusi Formation shales. Intergranular pores, dissolved pores, as well as organic matter pores, are the most abundant, these are primary storage spaces for shale gas. The microscopic pores in the Lower Paleozoic shales are mainly composed of micropores, mesopores, and a small amount of macropores. The micropore and mesopore in the Qiongzhusi Formation shale account for 83.92% of the total pore volume. The micropore and mesopore in the Longmaxi Formation shale accounts for 78.17% of the total pore volume. Thus, the micropores and mesopores are the chief components of microscopic pores in the Lower Paleozoic shale gas reservoirs in the southern Sichuan Basin.

  10. Investigating the effects of stress on the pore structures of nuclear grade graphites

    Energy Technology Data Exchange (ETDEWEB)

    Taylor, Joshua E.L., E-mail: joshua.taylor@postgrad.manchester.ac.uk; Hall, Graham N., E-mail: graham.n.hall@manchester.ac.uk; Mummery, Paul M., E-mail: paul.m.mummery@manchester.ac.uk

    2016-03-15

    Graphite is used as a moderating material and as a structural component in a number of current generation nuclear reactors. During reactor operation stresses develop in the graphite components, causing them to deform. It is important to understand how the microstructure of graphite affects the material's response to these stresses. A series of experiments were performed to investigate how the pore structures of Pile Grade A and Gilsocarbon graphites respond to loading stresses. A compression rig was used to simulate the build-up of operational stresses in graphite components, and a confocal laser microscope was used to study variation of a number of important pore properties. Values of elastic modulus and Poisson's ratio were calculated and compared to existing literature to confirm the validity of the experimental techniques. Mean pore areas were observed to decrease linearly with increasing applied load, mean pore eccentricity increased linearly, and a small amount of clockwise pore rotation was observed. The response to build-up of stresses was dependent on the orientation of the pores and basal planes and the shapes of the pores with respect to the loading axis. It was proposed that pore closure and pore reorientation were competing processes. Pore separation was quantified using ‘nearest neighbour’ and Voronoi techniques, and non-pore regions were found to shrink linearly with increasing applied load. - Highlights: • Effects of stress on pore structures of Gilsocarbon and PGA graphites were studied. • Application of a compressive load was used to generate stresses in graphite. • Inverse linear relationship between stress and pore area was observed. • Mean pore eccentricity increased, clockwise pore rotation observed. • Separation of pores quantified using Voronoi and ‘nearest-neighbour’ methods.

  11. Determination of pore diameter from rejection measurements with a mixture of oligosaccharides

    Energy Technology Data Exchange (ETDEWEB)

    Espinoza-Gomez, Heriberto; Rogel-Hernandez, Eduardo [Universidad Autonoma de Baja California-Tijuana, Facultad de Ciencias Quimicas e Ingenieria, Tijuana, BC (Mexico); Lin, Shui Wai [Centro de Graduados e Investigacion del Instituto Tecnologico de Tijuana, Apdo. Postal 1166, Tijuana, BC (Mexico)

    2005-04-01

    This paper present a method to determine pore diameters and effective transport through membranes using a mixture of oligosaccharides. The results are compared with the Maxwell-Stefan equations. The partition coefficients of the solutes are a function of the pore diameter according to the Ferry equation. Thus, with the pore diameter as the only unknown parameter, rejection is described and the pore diameter is obtained by a Marquardt-Levenberg optimization procedure. (orig.)

  12. Contribution of soil fauna to soil functioning in degraded environments: a multidisciplinary approach

    Science.gov (United States)

    Gargiulo, Laura; Mele, Giacomo; Moradi, Jabbar; Kukla, Jaroslav; Jandová, Kateřina; Frouz, Jan

    2016-04-01

    . All replicates were subjected to soil respiration measurement by means of chemical titration method. Then some replicates were destructively analyzed for PLFA and ergosterol and others were used for the 3D soil image analysis of the soil pore system. The soil cores were imaged using X-ray microtomography and three-dimensional image processing was performed in order to obtain 3D reconstructions and preliminary analysis of the identified biopores. The experimental approach used in this multidisciplinary study showed a promising potential to provide new useful information about the widely differentiated contribution of many types of macrofauna to the formation of the soil pore system and to the development of the soil microbial functions in different types of environments.

  13. Effects of incubation on solubility and mobility of trace metals in two contaminated soils

    International Nuclear Information System (INIS)

    Ma, Lena Q.; Dong Yan

    2004-01-01

    Much research has focused on changes in solubility and mobility of trace metals in soils under incubation. In this experiment, changes in solubility and mobility of trace metals (Pb, Cu and As) and Fe in two contaminated soils from Tampa, Florida and Montreal, Canada were examined. Soils of 30 g were packed in columns and were incubated for 3-80 days under water-flooding incubation. Following incubation, metal concentrations in pore water (water soluble) and in 0.01 M CaCl 2 leachates (exchangeable+water soluble) were determined. While both soils were contaminated with Pb (1600-2500 mg kg -1 ), Tampa soil was also contaminated with As (230 mg kg -1 ). Contrast to the low pH (3.8) of Tampa soil, Montreal soil had an alkaline pH of 7.7 and high Ca of 1.6%. Concentrations of Fe(II) increased with incubation time in the Tampa soil mainly due to reductive Fe dissolution, but decreased in the Montreal soil possibly due to formation of FeCO 3 . The inverse relationship between concentrations of Pb and Fe(II) in pore water coupled with the fact that Fe(II) concentrations were much greater than those of Pb in pore water may suggest the importance of Fe(II) in controlling Pb solubility in soils. However, changes in concentrations of Fe(II), Pb, Cu and As in pore water with incubation time were similar to those in leachate, i.e. water soluble metals were positively related to exchangeable metals in the two contaminated soils. This research suggests the importance of Fe in controlling metal solubility and mobility in soils under water-flooded incubation. - Iron is important in controlling metal solubility and mobility in flooded soils

  14. Variability in chemistry of surface and soil waters of an ...

    African Journals Online (AJOL)

    Water chemistry is important for the maintenance of wetland structure and function. Interpreting ecological patterns in a wetland system therefore requires an in-depth understanding of the water chemistry of that system. We investigated the spatial distribution of chemical solutes both in soil pore water and surface water, ...

  15. Invariance of single-file water mobility in gramicidin-like peptidic pores as function of pore length.

    Science.gov (United States)

    Portella, Guillem; Pohl, Peter; de Groot, Bert L

    2007-06-01

    We investigated the structural and energetic determinants underlying water permeation through peptidic nanopores, motivated by recent experimental findings that indicate that water mobility in single-file water channels displays nonlinear length dependence. To address the molecular mechanism determining the observed length dependence, we studied water permeability in a series of designed gramicidin-like channels of different length using atomistic molecular dynamics simulations. We found that within the studied range of length the osmotic water permeability is independent of pore length. This result is at variance with textbook models, where the relationship is assumed to be linear. Energetic analysis shows that loss of solvation rather than specific water binding sites in the pore form the main energetic barrier for water permeation, consistent with our dynamics results. For this situation, we propose a modified expression for osmotic permeability that fully takes into account water motion collectivity and does not depend on the pore length. Different schematic barrier profiles are discussed that explain both experimental and computational interpretations, and we propose a set of experiments aimed at validation of the presented results. Implications of the results for the design of peptidic channels with desired permeation characteristics are discussed.

  16. Position-Dependent Dynamics Explain Pore-Averaged Diffusion in Strongly Attractive Adsorptive Systems.

    Science.gov (United States)

    Krekelberg, William P; Siderius, Daniel W; Shen, Vincent K; Truskett, Thomas M; Errington, Jeffrey R

    2017-12-12

    Using molecular simulations, we investigate the relationship between the pore-averaged and position-dependent self-diffusivity of a fluid adsorbed in a strongly attractive pore as a function of loading. Previous work (Krekelberg, W. P.; Siderius, D. W.; Shen, V. K.; Truskett, T. M.; Errington, J. R. Connection between thermodynamics and dynamics of simple fluids in highly attractive pores. Langmuir 2013, 29, 14527-14535, doi: 10.1021/la4037327) established that pore-averaged self-diffusivity in the multilayer adsorption regime, where the fluid exhibits a dense film at the pore surface and a lower density interior pore region, is nearly constant as a function of loading. Here we show that this puzzling behavior can be understood in terms of how loading affects the fraction of particles that reside in the film and interior pore regions as well as their distinct dynamics. Specifically, the insensitivity of pore-averaged diffusivity to loading arises from the approximate cancellation of two factors: an increase in the fraction of particles in the higher diffusivity interior pore region with loading and a corresponding decrease in the particle diffusivity in that region. We also find that the position-dependent self-diffusivities scale with the position-dependent density. We present a model for predicting the pore-average self-diffusivity based on the position-dependent self-diffusivity, which captures the unusual characteristics of pore-averaged self-diffusivity in strongly attractive pores over several orders of magnitude.

  17. Image-based numerical simulation of the local cyclic deformation behavior around cast pore in steel

    Energy Technology Data Exchange (ETDEWEB)

    Qian, Lihe, E-mail: dlhqian@yahoo.com [State Key Laboratory of Metastable Materials Science and Technology, Yanshan University (China); National Engineering Research Center for Equipment and Technology of Cold Strip Rolling, Yanshan University (China); Cui, Xiaona; Liu, Shuai [State Key Laboratory of Metastable Materials Science and Technology, Yanshan University (China); National Engineering Research Center for Equipment and Technology of Cold Strip Rolling, Yanshan University (China); Chen, Minan [State Key Laboratory of Metastable Materials Science and Technology, Yanshan University (China); Ma, Penghui [State Key Laboratory of Metastable Materials Science and Technology, Yanshan University (China); National Engineering Research Center for Equipment and Technology of Cold Strip Rolling, Yanshan University (China); Xie, Honglan [Shanghai Synchrotron Radiation Facility, Shanghai Institute of Applied Physics (China); Zhang, Fucheng [State Key Laboratory of Metastable Materials Science and Technology, Yanshan University (China); National Engineering Research Center for Equipment and Technology of Cold Strip Rolling, Yanshan University (China); Meng, Jiangying [State Key Laboratory of Metastable Materials Science and Technology, Yanshan University (China)

    2016-12-15

    The local cyclic stress/strain responses around an actual, irregular pore in cast Hadfield steel under fatigue loading are investigated numerically, and compared with those around a spherical and an ellipsoidal pore. The actual pore-containing model takes into account the real shape of the pore imaged via high-resolution synchrotron X-ray computed tomography and combines both isotropic hardening and Bauschinger effects by using the Chaboche's material model, which enables to realistically simulate the cyclic deformation behaviors around actual pore. The results show that the stress and strain energy density concentration factors (K{sub σ} and K{sub E}) around either an actual irregular pore or an idealized pore increase while the strain concentration factor (K{sub ε}) decreases slightly with increasing the number of fatigue cycles. However, all the three parameters, K{sub σ}, K{sub ε} and K{sub E}, around an actual pore are always several times larger than those around an idealized pore, whatever the number of fatigue cycles. It is suggested that the fatigue properties of cast pore-containing materials cannot be realistically evaluated with any idealized pore models. The feasibility of the methodology presented highlights the potential of its application in the micromechanical understanding of fatigue damage phenomena in cast pore-containing materials.

  18. Effect of porosity and pore morphology on the low-frequency ...

    Indian Academy of Sciences (India)

    Effect of porosity and pore size distribution on the low-frequency dielectric response, in the range 0.01-100 kHz, in sintered ZrO2-8 mol% Y2O3 ceramic compacts have been investigated. Small-angle neutron scattering (SANS) technique has been employed to obtain the pore characteristics like pore size distribution, ...

  19. Semi-empirical formula for large pore-size estimation from o-Ps annihilation lifetime

    International Nuclear Information System (INIS)

    Nguyen Duc Thanh; Tran Quoc Dung; Luu Anh Tuyen; Khuong Thanh Tuan

    2007-01-01

    The o-Ps annihilation rate in large pore was investigated by the semi-classical approach. The semi-empirical formula that simply correlates between the pore size and the o-Ps lifetime was proposed. The calculated results agree well with experiment in the range from some angstroms to several ten nanometers size of pore. (author)

  20. Sebum output as a factor contributing to the size of facial pores.

    Science.gov (United States)

    Roh, M; Han, M; Kim, D; Chung, K

    2006-11-01

    Many endogenous and exogenous factors are known to cause enlarged pilosebaceous pores. Such factors include sex, genetic predisposition, ageing, chronic ultraviolet light exposure, comedogenic xenobiotics, acne and seborrhoea. This study was an attempt to determine the factors related to enlarged pores. To assess the relationship of sebum output, age, sex, hormonal factors and severity of acne with pore size. A prospective, randomized, controlled study was designed. A total of 60 volunteers, 30 males and 30 females, were recruited for this study. Magnified images of pores were taken using a dermoscopic video camera and measured using an image analysis program. The sebum output level was measured with a Sebumeter. Using multiple linear regression analysis, increased pore size was significantly associated with increased sebum output level, sex and age. Among the variables, sebum output level correlated most with the pore size followed by male sex. In comparing male and female participants, males had higher correlation between the sebum output level and the pore size (male: r = 0.47, female: r = 0.38). Thus, additional factors seem to influence pore size in females. Pore size was significantly increased during the ovulation phase (P = 0.008), but severity of acne was not significantly associated with the pore size. Enlarged pore sizes are associated with increased sebum output level, age and male sex. In female patients, additional hormonal factors, such as those of the menstrual cycle, affect the pore size.